Query 025657
Match_columns 249
No_of_seqs 183 out of 1282
Neff 6.7
Searched_HMMs 29240
Date Mon Mar 25 14:49:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025657.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/025657hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3sgz_A Hydroxyacid oxidase 2; 100.0 2E-72 6.8E-77 518.4 21.6 236 7-249 2-238 (352)
2 2nzl_A Hydroxyacid oxidase 1; 100.0 1.8E-60 6.2E-65 445.4 24.7 245 5-249 25-273 (392)
3 1p4c_A L(+)-mandelate dehydrog 100.0 3.2E-58 1.1E-62 428.7 27.2 244 5-249 3-246 (380)
4 2nli_A Lactate oxidase; flavoe 100.0 1.2E-58 4.1E-63 430.0 22.2 240 4-249 10-250 (368)
5 1gox_A (S)-2-hydroxy-acid oxid 100.0 1.3E-57 4.4E-62 423.1 27.8 244 6-249 3-246 (370)
6 1kbi_A Cytochrome B2, L-LCR; f 100.0 3.3E-56 1.1E-60 428.8 25.2 239 5-249 120-364 (511)
7 2qr6_A IMP dehydrogenase/GMP r 100.0 2.4E-30 8.3E-35 241.1 -0.1 203 18-249 13-232 (393)
8 1vcf_A Isopentenyl-diphosphate 99.9 2.5E-25 8.6E-30 203.1 6.3 186 26-249 8-205 (332)
9 3sr7_A Isopentenyl-diphosphate 99.9 1.1E-21 3.7E-26 181.6 13.4 162 44-249 54-230 (365)
10 3r2g_A Inosine 5'-monophosphat 99.9 1.2E-21 4.3E-26 180.8 10.6 150 44-249 8-162 (361)
11 1p0k_A Isopentenyl-diphosphate 99.8 4.3E-21 1.5E-25 176.0 12.5 164 42-249 21-202 (349)
12 1ypf_A GMP reductase; GUAC, pu 99.8 2.3E-19 7.8E-24 164.1 4.8 161 36-249 6-170 (336)
13 3vkj_A Isopentenyl-diphosphate 99.8 2.3E-18 7.7E-23 159.6 10.8 166 44-249 27-211 (368)
14 2c6q_A GMP reductase 2; TIM ba 99.7 1.2E-16 4.1E-21 147.1 10.3 155 38-249 14-182 (351)
15 1eep_A Inosine 5'-monophosphat 99.6 4.3E-16 1.5E-20 145.5 8.8 194 44-249 10-215 (404)
16 1gte_A Dihydropyrimidine dehyd 99.0 1E-09 3.5E-14 113.1 10.5 159 51-249 520-728 (1025)
17 3khj_A Inosine-5-monophosphate 98.8 3.6E-08 1.2E-12 90.9 13.9 142 45-249 14-166 (361)
18 1f76_A Dihydroorotate dehydrog 98.7 1.2E-08 4E-13 92.5 6.3 168 61-249 42-238 (336)
19 1wv2_A Thiazole moeity, thiazo 98.7 2.4E-08 8.2E-13 87.8 7.3 123 103-249 72-209 (265)
20 4fo4_A Inosine 5'-monophosphat 98.4 1.6E-06 5.6E-11 79.9 11.9 146 45-249 15-170 (366)
21 2e6f_A Dihydroorotate dehydrog 98.4 2.7E-06 9.3E-11 76.0 12.1 143 62-249 2-187 (314)
22 1vhn_A Putative flavin oxidore 98.4 4E-07 1.4E-11 82.0 6.6 137 72-249 2-153 (318)
23 3ffs_A Inosine-5-monophosphate 98.2 5.5E-06 1.9E-10 77.3 9.4 70 45-122 11-82 (400)
24 1ep3_A Dihydroorotate dehydrog 98.1 3.2E-06 1.1E-10 75.1 6.8 146 60-249 3-189 (311)
25 1jub_A Dihydroorotate dehydrog 97.9 0.00015 5.1E-09 64.5 13.1 40 64-109 2-41 (311)
26 1xm3_A Thiazole biosynthesis p 97.7 0.00016 5.4E-09 63.5 9.0 99 127-249 94-200 (264)
27 1ea0_A Glutamate synthase [NAD 97.6 0.00028 9.6E-09 74.6 11.1 168 45-249 824-1017(1479)
28 2z6i_A Trans-2-enoyl-ACP reduc 97.6 0.0006 2.1E-08 61.5 11.6 118 66-249 6-130 (332)
29 2gjl_A Hypothetical protein PA 97.4 0.002 6.8E-08 57.8 12.6 120 66-249 9-138 (328)
30 3b0p_A TRNA-dihydrouridine syn 97.0 0.0071 2.4E-07 55.0 11.8 168 73-247 2-217 (350)
31 4ef8_A Dihydroorotate dehydrog 96.7 0.013 4.5E-07 53.5 11.4 144 52-240 25-205 (354)
32 3bw2_A 2-nitropropane dioxygen 96.6 0.035 1.2E-06 50.5 13.9 138 74-249 10-165 (369)
33 3bo9_A Putative nitroalkan dio 96.6 0.043 1.5E-06 49.2 13.8 114 72-249 24-144 (326)
34 3usb_A Inosine-5'-monophosphat 96.6 0.0085 2.9E-07 57.3 9.5 33 217-249 285-318 (511)
35 3oix_A Putative dihydroorotate 96.5 0.12 4.1E-06 46.9 16.5 97 62-165 36-168 (345)
36 4fxs_A Inosine-5'-monophosphat 96.4 0.019 6.7E-07 54.5 11.1 108 45-160 12-127 (496)
37 1ofd_A Ferredoxin-dependent gl 96.3 0.023 8E-07 60.4 11.7 69 45-120 841-911 (1520)
38 1jcn_A Inosine monophosphate d 95.4 0.015 5.3E-07 55.2 5.5 34 216-249 283-317 (514)
39 1vrd_A Inosine-5'-monophosphat 95.4 0.021 7.3E-07 53.8 6.4 34 216-249 265-299 (494)
40 1jub_A Dihydroorotate dehydrog 95.2 0.069 2.4E-06 47.1 8.7 150 74-249 93-264 (311)
41 2htm_A Thiazole biosynthesis p 94.6 0.034 1.2E-06 48.9 4.9 122 104-249 63-200 (268)
42 3tjx_A Dihydroorotate dehydrog 94.6 0.063 2.2E-06 48.5 6.8 44 59-108 32-75 (354)
43 3zwt_A Dihydroorotate dehydrog 94.4 0.1 3.4E-06 47.8 7.7 97 126-249 221-320 (367)
44 1mzh_A Deoxyribose-phosphate a 94.4 0.36 1.2E-05 40.8 10.7 80 121-249 112-197 (225)
45 3tdn_A FLR symmetric alpha-bet 94.1 0.21 7.2E-06 42.4 8.7 35 215-249 66-101 (247)
46 1zfj_A Inosine monophosphate d 93.8 0.13 4.3E-06 48.4 7.4 34 216-249 261-295 (491)
47 1ka9_F Imidazole glycerol phos 93.3 0.39 1.3E-05 40.6 9.0 35 215-249 183-218 (252)
48 2e6f_A Dihydroorotate dehydrog 93.0 0.18 6E-06 44.5 6.5 103 125-249 160-266 (314)
49 1f76_A Dihydroorotate dehydrog 93.0 0.24 8.1E-06 44.2 7.4 97 126-249 212-311 (336)
50 1ypf_A GMP reductase; GUAC, pu 92.9 0.76 2.6E-05 41.1 10.7 119 90-249 104-232 (336)
51 3gr7_A NADPH dehydrogenase; fl 92.9 1.1 3.8E-05 40.2 11.8 86 123-249 207-299 (340)
52 1jvn_A Glutamine, bifunctional 92.7 0.3 1E-05 46.9 8.2 75 128-247 437-516 (555)
53 1thf_D HISF protein; thermophI 92.1 0.28 9.5E-06 41.5 6.5 34 216-249 62-96 (253)
54 3zwt_A Dihydroorotate dehydrog 92.1 1.3 4.5E-05 40.3 11.3 46 34-81 22-67 (367)
55 4avf_A Inosine-5'-monophosphat 92.1 0.21 7.2E-06 47.3 6.2 33 217-249 258-291 (490)
56 4ef8_A Dihydroorotate dehydrog 92.1 0.21 7.2E-06 45.5 5.9 97 123-249 191-299 (354)
57 4af0_A Inosine-5'-monophosphat 91.9 0.29 1E-05 47.0 6.9 110 45-162 61-178 (556)
58 1tv5_A Dhodehase, dihydroorota 91.5 0.93 3.2E-05 42.5 9.7 95 126-249 297-395 (443)
59 1me8_A Inosine-5'-monophosphat 91.4 0.19 6.5E-06 47.7 5.0 34 216-249 270-305 (503)
60 1z41_A YQJM, probable NADH-dep 91.0 2 6.9E-05 38.3 11.2 85 124-249 208-299 (338)
61 2w6r_A Imidazole glycerol phos 90.7 0.95 3.2E-05 38.5 8.4 35 215-249 187-222 (266)
62 2y88_A Phosphoribosyl isomeras 89.9 1.4 4.6E-05 36.9 8.6 32 218-249 64-96 (244)
63 1qo2_A Molecule: N-((5-phospho 89.8 0.9 3.1E-05 38.2 7.4 34 215-248 175-209 (241)
64 1thf_D HISF protein; thermophI 89.7 1.8 6.2E-05 36.3 9.3 35 215-249 182-217 (253)
65 3i65_A Dihydroorotate dehydrog 89.5 1.5 5.2E-05 40.7 9.2 95 126-249 269-367 (415)
66 3bw2_A 2-nitropropane dioxygen 89.2 3.5 0.00012 37.0 11.3 34 216-249 196-230 (369)
67 1vyr_A Pentaerythritol tetrani 89.1 3.2 0.00011 37.5 11.0 34 216-249 282-315 (364)
68 4e38_A Keto-hydroxyglutarate-a 89.1 0.69 2.4E-05 39.6 6.1 111 129-249 36-147 (232)
69 3hgj_A Chromate reductase; TIM 89.0 4.1 0.00014 36.5 11.6 83 127-249 221-310 (349)
70 1y0e_A Putative N-acetylmannos 89.0 3.7 0.00013 33.7 10.5 106 91-249 23-139 (223)
71 1vc4_A Indole-3-glycerol phosp 88.8 0.73 2.5E-05 39.8 6.2 79 117-249 49-128 (254)
72 1ep3_A Dihydroorotate dehydrog 88.6 0.49 1.7E-05 41.2 5.0 34 216-249 229-263 (311)
73 2gjl_A Hypothetical protein PA 88.6 3.7 0.00013 36.1 10.9 35 215-249 159-194 (328)
74 2gou_A Oxidoreductase, FMN-bin 88.6 2.7 9.2E-05 38.1 10.1 34 216-249 281-314 (365)
75 2uva_G Fatty acid synthase bet 88.5 1.8 6.3E-05 47.8 10.3 98 51-156 558-670 (2060)
76 1jcn_A Inosine monophosphate d 88.1 2.6 8.8E-05 39.7 10.0 115 93-249 256-380 (514)
77 2w6r_A Imidazole glycerol phos 88.0 1.5 5.1E-05 37.2 7.6 34 216-249 62-96 (266)
78 3tsm_A IGPS, indole-3-glycerol 87.7 0.74 2.5E-05 40.4 5.5 80 117-249 62-142 (272)
79 3bo9_A Putative nitroalkan dio 87.5 3.2 0.00011 36.8 9.8 35 215-249 163-198 (326)
80 2z6i_A Trans-2-enoyl-ACP reduc 87.3 4 0.00014 36.1 10.3 104 94-249 78-184 (332)
81 1vhn_A Putative flavin oxidore 87.3 0.95 3.3E-05 40.0 6.1 31 215-247 172-203 (318)
82 3q58_A N-acetylmannosamine-6-p 86.7 1.7 5.9E-05 36.8 7.2 34 215-249 169-203 (229)
83 3l5l_A Xenobiotic reductase A; 86.7 5.8 0.0002 35.7 11.1 83 127-249 227-317 (363)
84 3khj_A Inosine-5-monophosphate 86.2 7 0.00024 35.3 11.4 34 216-249 192-229 (361)
85 1p0k_A Isopentenyl-diphosphate 86.0 1.9 6.5E-05 38.5 7.5 34 216-249 238-273 (349)
86 1h5y_A HISF; histidine biosynt 86.0 3.7 0.00013 33.8 8.9 35 215-249 185-220 (253)
87 3o07_A Pyridoxine biosynthesis 85.4 0.51 1.7E-05 41.8 3.1 36 214-249 184-222 (291)
88 3sgz_A Hydroxyacid oxidase 2; 85.3 1.8 6.2E-05 39.3 6.9 86 114-249 203-294 (352)
89 3igs_A N-acetylmannosamine-6-p 84.3 2.3 7.9E-05 36.0 6.8 34 215-249 169-203 (232)
90 1ka9_F Imidazole glycerol phos 84.2 1.5 5.2E-05 36.8 5.6 34 216-249 63-97 (252)
91 2nli_A Lactate oxidase; flavoe 84.0 2.8 9.7E-05 38.0 7.6 86 114-249 215-306 (368)
92 2y88_A Phosphoribosyl isomeras 83.9 5.1 0.00017 33.3 8.8 34 215-248 180-214 (244)
93 3tdn_A FLR symmetric alpha-bet 83.6 0.68 2.3E-05 39.2 3.2 35 215-249 187-222 (247)
94 2tps_A Protein (thiamin phosph 83.3 6.4 0.00022 32.2 9.0 36 214-249 157-193 (227)
95 2cu0_A Inosine-5'-monophosphat 83.2 0.6 2E-05 43.9 2.9 40 45-84 16-57 (486)
96 1yad_A Regulatory protein TENI 83.1 11 0.00036 31.0 10.3 36 214-249 150-185 (221)
97 2nzl_A Hydroxyacid oxidase 1; 83.1 2.2 7.4E-05 39.2 6.5 85 115-249 239-329 (392)
98 1p4c_A L(+)-mandelate dehydrog 83.0 2.4 8E-05 38.7 6.7 34 216-249 266-300 (380)
99 1z41_A YQJM, probable NADH-dep 83.0 24 0.00083 31.1 14.3 21 66-86 9-29 (338)
100 3ffs_A Inosine-5-monophosphate 82.5 8.8 0.0003 35.3 10.4 110 94-249 146-268 (400)
101 3qja_A IGPS, indole-3-glycerol 82.5 2 7E-05 37.4 5.9 33 217-249 200-235 (272)
102 1qo2_A Molecule: N-((5-phospho 82.3 2.9 9.9E-05 35.0 6.6 34 215-249 61-95 (241)
103 1vzw_A Phosphoribosyl isomeras 82.1 5.2 0.00018 33.3 8.2 35 214-248 176-211 (244)
104 1yxy_A Putative N-acetylmannos 82.1 18 0.00063 29.7 11.5 112 87-249 30-153 (234)
105 3lab_A Putative KDPG (2-keto-3 82.0 4.9 0.00017 34.0 7.8 70 129-249 15-85 (217)
106 3qja_A IGPS, indole-3-glycerol 81.6 0.7 2.4E-05 40.4 2.5 80 117-249 55-135 (272)
107 2r91_A 2-keto-3-deoxy-(6-phosp 80.6 12 0.0004 32.5 10.1 81 76-159 5-97 (286)
108 3usb_A Inosine-5'-monophosphat 80.2 19 0.00065 33.9 12.1 112 93-249 257-381 (511)
109 3aty_A Tcoye, prostaglandin F2 79.8 8.5 0.00029 35.0 9.2 31 218-249 298-328 (379)
110 1vhc_A Putative KHG/KDPG aldol 79.7 1.9 6.5E-05 36.4 4.5 35 213-249 96-130 (224)
111 4fo4_A Inosine 5'-monophosphat 79.5 24 0.00081 31.9 12.1 34 216-249 196-233 (366)
112 1vzw_A Phosphoribosyl isomeras 79.4 1.8 6E-05 36.3 4.2 32 218-249 65-97 (244)
113 1wa3_A 2-keto-3-deoxy-6-phosph 79.2 1.8 6.1E-05 35.3 4.1 107 135-249 18-124 (205)
114 4adt_A Pyridoxine biosynthetic 79.2 5.7 0.00019 35.1 7.6 34 216-249 66-100 (297)
115 2fli_A Ribulose-phosphate 3-ep 79.1 7.1 0.00024 31.8 7.9 32 218-249 155-191 (220)
116 1xi3_A Thiamine phosphate pyro 78.8 14 0.00047 29.7 9.5 36 214-249 148-183 (215)
117 3o63_A Probable thiamine-phosp 78.5 12 0.00041 31.8 9.3 36 214-249 175-212 (243)
118 2nuw_A 2-keto-3-deoxygluconate 78.3 17 0.00057 31.5 10.4 82 76-159 5-98 (288)
119 1h5y_A HISF; histidine biosynt 78.0 2.1 7E-05 35.5 4.2 34 216-249 65-99 (253)
120 1gte_A Dihydropyrimidine dehyd 76.4 9.7 0.00033 39.0 9.4 33 217-249 775-809 (1025)
121 1rpx_A Protein (ribulose-phosp 75.6 21 0.00072 29.3 9.9 81 75-161 9-100 (230)
122 3nav_A Tryptophan synthase alp 75.0 2.6 8.8E-05 36.8 4.1 32 218-249 198-230 (271)
123 1vcf_A Isopentenyl-diphosphate 74.5 3 0.0001 37.0 4.5 34 216-249 243-278 (332)
124 1kbi_A Cytochrome B2, L-LCR; f 74.2 9.2 0.00032 36.2 8.0 34 216-249 384-425 (511)
125 3r2g_A Inosine 5'-monophosphat 74.2 20 0.00068 32.5 9.9 111 91-249 99-221 (361)
126 3igs_A N-acetylmannosamine-6-p 73.0 17 0.00059 30.5 8.7 57 94-158 39-107 (232)
127 3q58_A N-acetylmannosamine-6-p 72.8 18 0.0006 30.4 8.8 57 94-158 39-107 (229)
128 1gox_A (S)-2-hydroxy-acid oxid 72.7 8.1 0.00028 34.8 7.0 35 215-249 265-302 (370)
129 4fxs_A Inosine-5'-monophosphat 72.6 10 0.00034 35.7 7.8 112 93-249 232-356 (496)
130 3d0c_A Dihydrodipicolinate syn 72.1 40 0.0014 29.5 11.3 82 76-159 17-113 (314)
131 2yw3_A 4-hydroxy-2-oxoglutarat 71.1 15 0.00053 30.2 7.9 112 101-249 11-124 (207)
132 4avf_A Inosine-5'-monophosphat 70.7 11 0.00037 35.4 7.6 113 93-249 230-354 (490)
133 1qop_A Tryptophan synthase alp 70.6 20 0.00069 30.6 8.8 34 216-249 193-227 (268)
134 1ydn_A Hydroxymethylglutaryl-C 70.1 9.7 0.00033 33.0 6.7 26 136-162 152-177 (295)
135 3tjx_A Dihydroorotate dehydrog 70.1 7 0.00024 34.9 5.9 32 218-249 266-299 (354)
136 3kts_A Glycerol uptake operon 70.0 5.8 0.0002 32.9 4.9 37 213-249 135-172 (192)
137 1eep_A Inosine 5'-monophosphat 69.7 8.1 0.00028 35.1 6.3 110 93-249 154-278 (404)
138 1wbh_A KHG/KDPG aldolase; lyas 69.5 6.2 0.00021 32.9 5.1 30 219-249 100-129 (214)
139 3nvt_A 3-deoxy-D-arabino-heptu 69.4 67 0.0023 29.2 12.9 80 63-157 128-211 (385)
140 1xm3_A Thiazole biosynthesis p 69.4 37 0.0013 28.9 10.2 91 65-162 3-101 (264)
141 2r8w_A AGR_C_1641P; APC7498, d 69.2 29 0.00099 30.8 9.8 83 76-159 40-136 (332)
142 3kru_A NADH:flavin oxidoreduct 68.9 4.8 0.00017 36.1 4.5 37 213-249 262-299 (343)
143 3na8_A Putative dihydrodipicol 68.7 23 0.00078 31.2 8.9 85 75-160 29-127 (315)
144 2cu0_A Inosine-5'-monophosphat 67.0 13 0.00045 34.6 7.3 30 217-246 257-286 (486)
145 3glc_A Aldolase LSRF; TIM barr 66.8 39 0.0013 29.6 9.9 65 95-159 193-257 (295)
146 2v82_A 2-dehydro-3-deoxy-6-pho 65.8 27 0.00092 28.2 8.3 32 129-160 9-40 (212)
147 2hsa_B 12-oxophytodienoate red 65.5 6.4 0.00022 36.1 4.7 34 216-249 307-340 (402)
148 3tsm_A IGPS, indole-3-glycerol 65.1 36 0.0012 29.4 9.3 36 214-249 204-242 (272)
149 3eez_A Putative mandelate race 64.6 12 0.00042 33.6 6.4 34 216-249 225-259 (378)
150 1zfj_A Inosine monophosphate d 63.9 17 0.00059 33.6 7.5 108 45-160 13-128 (491)
151 3vkj_A Isopentenyl-diphosphate 63.8 19 0.00065 32.6 7.5 32 218-249 256-289 (368)
152 2vc6_A MOSA, dihydrodipicolina 62.2 62 0.0021 27.8 10.4 83 76-160 7-103 (292)
153 1mxs_A KDPG aldolase; 2-keto-3 62.0 7.9 0.00027 32.6 4.3 30 219-249 110-139 (225)
154 4adt_A Pyridoxine biosynthetic 61.5 6.3 0.00022 34.8 3.7 36 214-249 193-231 (297)
155 2r14_A Morphinone reductase; H 60.9 7.1 0.00024 35.4 4.1 34 216-249 287-320 (377)
156 1ps9_A 2,4-dienoyl-COA reducta 60.4 24 0.00083 33.9 8.0 34 216-249 268-302 (671)
157 2rfg_A Dihydrodipicolinate syn 60.3 44 0.0015 28.9 9.1 82 76-159 7-102 (297)
158 3l5a_A NADH/flavin oxidoreduct 59.3 23 0.00078 32.6 7.3 33 215-247 303-338 (419)
159 3f4w_A Putative hexulose 6 pho 59.2 66 0.0023 25.6 9.6 34 216-249 146-180 (211)
160 3vk5_A MOEO5; TIM barrel, tran 58.6 12 0.00041 33.0 4.9 37 213-249 210-249 (286)
161 1vrd_A Inosine-5'-monophosphat 57.5 29 0.00098 32.2 7.8 25 225-249 337-362 (494)
162 4a3u_A NCR, NADH\:flavin oxido 57.3 7.9 0.00027 34.8 3.7 32 218-249 276-307 (358)
163 3ozy_A Putative mandelate race 56.9 9.3 0.00032 34.6 4.2 36 214-249 232-269 (389)
164 1to3_A Putative aldolase YIHT; 56.3 74 0.0025 27.7 9.8 46 114-159 111-162 (304)
165 3lab_A Putative KDPG (2-keto-3 55.9 6.3 0.00022 33.3 2.6 109 86-249 20-132 (217)
166 1yxy_A Putative N-acetylmannos 54.7 15 0.00053 30.2 4.9 34 215-249 174-208 (234)
167 2qr6_A IMP dehydrogenase/GMP r 53.8 71 0.0024 28.6 9.6 34 216-249 255-299 (393)
168 2nv1_A Pyridoxal biosynthesis 53.7 7.4 0.00025 33.9 2.8 37 213-249 192-231 (305)
169 3i65_A Dihydroorotate dehydrog 53.4 9.3 0.00032 35.4 3.5 73 48-132 69-142 (415)
170 1vyr_A Pentaerythritol tetrani 53.3 59 0.002 29.1 8.9 45 66-110 9-56 (364)
171 2zbt_A Pyridoxal biosynthesis 53.0 7.9 0.00027 33.5 2.9 36 214-249 193-231 (297)
172 1rvg_A Fructose-1,6-bisphospha 52.7 17 0.00059 32.2 5.0 38 212-249 186-246 (305)
173 3zen_D Fatty acid synthase; tr 51.8 36 0.0012 39.2 8.5 106 50-163 402-527 (3089)
174 1gvf_A Tagatose-bisphosphate a 51.5 11 0.00038 33.1 3.5 38 212-249 186-225 (286)
175 1h1y_A D-ribulose-5-phosphate 51.5 52 0.0018 27.0 7.7 33 217-249 161-194 (228)
176 1rvk_A Isomerase/lactonizing e 50.3 37 0.0013 30.2 7.0 36 214-249 237-274 (382)
177 3jva_A Dipeptide epimerase; en 50.3 23 0.00078 31.4 5.6 35 215-249 221-256 (354)
178 1vr6_A Phospho-2-dehydro-3-deo 50.1 21 0.00071 32.2 5.2 59 92-156 158-217 (350)
179 2ehh_A DHDPS, dihydrodipicolin 49.1 49 0.0017 28.5 7.4 83 76-160 7-103 (294)
180 3vzx_A Heptaprenylglyceryl pho 48.9 19 0.00064 30.5 4.5 31 216-246 167-199 (228)
181 1y0e_A Putative N-acetylmannos 48.8 19 0.00063 29.3 4.4 34 216-249 163-197 (223)
182 1icp_A OPR1, 12-oxophytodienoa 48.7 9.4 0.00032 34.6 2.8 34 216-249 289-322 (376)
183 3ks6_A Glycerophosphoryl diest 48.7 19 0.00064 30.3 4.5 73 91-163 117-215 (250)
184 2yxg_A DHDPS, dihydrodipicolin 48.7 48 0.0016 28.5 7.3 83 76-160 7-103 (289)
185 1vs1_A 3-deoxy-7-phosphoheptul 48.1 27 0.00093 30.3 5.5 62 90-157 88-150 (276)
186 3ceu_A Thiamine phosphate pyro 48.0 17 0.00058 29.7 4.0 37 213-249 127-165 (210)
187 3cpr_A Dihydrodipicolinate syn 47.9 84 0.0029 27.2 8.8 85 75-160 21-119 (304)
188 1rpx_A Protein (ribulose-phosp 47.4 1.1E+02 0.0037 24.8 9.0 31 130-160 14-44 (230)
189 3gd6_A Muconate cycloisomerase 47.3 22 0.00076 32.0 5.1 34 215-249 227-260 (391)
190 2rdx_A Mandelate racemase/muco 47.2 36 0.0012 30.3 6.4 34 216-249 225-259 (379)
191 1gvf_A Tagatose-bisphosphate a 47.2 24 0.00083 30.9 5.1 60 95-158 33-103 (286)
192 2yzr_A Pyridoxal biosynthesis 46.9 9.5 0.00033 34.3 2.4 34 216-249 228-264 (330)
193 2jz7_A Selenium binding protei 46.9 17 0.00057 26.0 3.2 27 138-164 34-61 (81)
194 4gj1_A 1-(5-phosphoribosyl)-5- 46.5 49 0.0017 27.8 6.8 135 96-245 67-214 (243)
195 1w3i_A EDA, 2-keto-3-deoxy glu 46.4 66 0.0023 27.7 7.8 83 76-160 5-99 (293)
196 3rjz_A N-type ATP pyrophosphat 45.7 24 0.00082 30.0 4.7 84 71-166 60-153 (237)
197 2nv1_A Pyridoxal biosynthesis 45.7 61 0.0021 28.0 7.5 34 216-249 66-100 (305)
198 3a5f_A Dihydrodipicolinate syn 45.0 52 0.0018 28.3 6.9 84 75-160 7-104 (291)
199 3l21_A DHDPS, dihydrodipicolin 45.0 74 0.0025 27.6 7.9 85 75-160 20-118 (304)
200 4a29_A Engineered retro-aldol 44.8 31 0.0011 29.8 5.3 36 214-249 188-226 (258)
201 2qdd_A Mandelate racemase/muco 44.8 84 0.0029 27.8 8.5 34 216-249 225-259 (378)
202 4ab4_A Xenobiotic reductase B; 44.7 17 0.00059 32.7 3.9 32 218-249 269-300 (362)
203 3cwo_X Beta/alpha-barrel prote 43.9 1.1E+02 0.0038 23.9 8.5 34 216-249 162-196 (237)
204 2wkj_A N-acetylneuraminate lya 43.8 79 0.0027 27.4 8.0 84 76-160 17-114 (303)
205 3sz8_A 2-dehydro-3-deoxyphosph 43.8 51 0.0017 28.8 6.6 69 83-156 70-138 (285)
206 1tqj_A Ribulose-phosphate 3-ep 43.6 65 0.0022 26.6 7.1 36 214-249 154-194 (230)
207 3gka_A N-ethylmaleimide reduct 43.6 19 0.00063 32.5 3.9 32 218-249 277-308 (361)
208 4h1z_A Enolase Q92ZS5; dehydra 43.5 32 0.0011 31.2 5.5 36 214-249 269-305 (412)
209 1o5k_A DHDPS, dihydrodipicolin 43.3 43 0.0015 29.2 6.1 84 75-160 18-115 (306)
210 3k30_A Histamine dehydrogenase 43.3 12 0.00042 36.2 2.8 36 214-249 280-316 (690)
211 2uva_G Fatty acid synthase bet 43.1 47 0.0016 36.8 7.5 127 75-246 638-774 (2060)
212 3flu_A DHDPS, dihydrodipicolin 43.0 82 0.0028 27.1 7.9 84 76-160 13-110 (297)
213 3b4u_A Dihydrodipicolinate syn 42.8 1.1E+02 0.0037 26.3 8.7 84 76-160 9-106 (294)
214 1geq_A Tryptophan synthase alp 42.7 14 0.0005 30.6 2.8 33 217-249 69-108 (248)
215 2zad_A Muconate cycloisomerase 42.5 33 0.0011 30.1 5.3 36 214-249 221-257 (345)
216 3can_A Pyruvate-formate lyase- 42.4 1.2E+02 0.0039 23.4 9.0 81 83-163 11-103 (182)
217 2agk_A 1-(5-phosphoribosyl)-5- 42.3 18 0.00061 31.0 3.4 35 214-248 187-226 (260)
218 1vr4_A Hypothetical protein AP 41.7 21 0.00071 26.5 3.2 27 138-164 59-86 (103)
219 2zbt_A Pyridoxal biosynthesis 41.5 29 0.00098 29.8 4.7 34 216-249 66-100 (297)
220 3ovp_A Ribulose-phosphate 3-ep 41.4 94 0.0032 25.8 7.8 34 216-249 156-190 (228)
221 2c6q_A GMP reductase 2; TIM ba 41.3 56 0.0019 29.1 6.7 26 224-249 219-245 (351)
222 2ftp_A Hydroxymethylglutaryl-C 41.2 28 0.00097 30.2 4.6 28 136-164 156-183 (302)
223 1xky_A Dihydrodipicolinate syn 41.2 90 0.0031 27.0 7.9 84 76-160 18-115 (301)
224 3vnd_A TSA, tryptophan synthas 41.0 23 0.00077 30.6 3.9 33 217-249 195-228 (267)
225 3s5o_A 4-hydroxy-2-oxoglutarat 40.8 82 0.0028 27.3 7.6 83 76-159 20-116 (307)
226 3tak_A DHDPS, dihydrodipicolin 40.7 79 0.0027 27.1 7.4 84 76-160 7-104 (291)
227 3sr7_A Isopentenyl-diphosphate 40.7 50 0.0017 29.8 6.3 32 218-249 267-300 (365)
228 1viz_A PCRB protein homolog; s 40.5 30 0.001 29.4 4.5 33 215-247 168-202 (240)
229 3w01_A Heptaprenylglyceryl pho 40.5 28 0.00096 29.6 4.3 32 216-247 173-206 (235)
230 3l12_A Putative glycerophospho 40.1 25 0.00084 30.6 4.0 69 95-163 169-279 (313)
231 1zco_A 2-dehydro-3-deoxyphosph 40.1 33 0.0011 29.4 4.8 62 90-157 73-135 (262)
232 2v9d_A YAGE; dihydrodipicolini 39.7 1.1E+02 0.0038 27.0 8.4 85 75-160 36-134 (343)
233 3h5d_A DHDPS, dihydrodipicolin 39.7 1.5E+02 0.0052 25.7 9.2 84 76-160 13-111 (311)
234 3qvq_A Phosphodiesterase OLEI0 39.6 23 0.0008 29.7 3.7 69 96-164 132-222 (252)
235 2p8b_A Mandelate racemase/muco 39.4 86 0.003 27.6 7.6 36 214-249 223-259 (369)
236 3qze_A DHDPS, dihydrodipicolin 39.3 65 0.0022 28.1 6.7 85 75-160 28-126 (314)
237 3stp_A Galactonate dehydratase 39.2 75 0.0026 28.9 7.3 35 215-249 268-303 (412)
238 3qkb_A Uncharacterized protein 39.1 24 0.00083 26.6 3.2 28 137-164 60-88 (111)
239 3dz1_A Dihydrodipicolinate syn 38.8 84 0.0029 27.3 7.3 84 75-159 13-109 (313)
240 1ujp_A Tryptophan synthase alp 38.8 60 0.002 27.8 6.2 155 67-245 46-220 (271)
241 2isw_A Putative fructose-1,6-b 38.8 24 0.00083 31.5 3.8 37 213-249 187-248 (323)
242 4e8g_A Enolase, mandelate race 38.7 50 0.0017 29.8 6.0 37 213-249 243-280 (391)
243 2r14_A Morphinone reductase; H 38.6 1E+02 0.0034 27.7 8.0 41 66-108 15-58 (377)
244 1vc4_A Indole-3-glycerol phosp 38.5 25 0.00087 29.9 3.8 35 214-249 189-229 (254)
245 3fkr_A L-2-keto-3-deoxyarabona 38.4 77 0.0026 27.5 7.0 85 75-160 13-111 (309)
246 1x60_A Sporulation-specific N- 38.2 71 0.0024 21.4 5.5 33 126-158 8-40 (79)
247 1qop_A Tryptophan synthase alp 38.2 37 0.0013 28.9 4.8 25 136-160 28-52 (268)
248 2gou_A Oxidoreductase, FMN-bin 37.6 89 0.0031 27.8 7.4 44 66-109 9-55 (365)
249 3si9_A DHDPS, dihydrodipicolin 37.5 98 0.0033 27.0 7.6 85 75-160 27-125 (315)
250 1f6k_A N-acetylneuraminate lya 37.4 84 0.0029 27.0 7.0 84 76-160 9-107 (293)
251 3q94_A Fructose-bisphosphate a 36.6 17 0.00058 31.9 2.4 38 212-249 190-229 (288)
252 1rd5_A Tryptophan synthase alp 36.4 1.8E+02 0.0063 24.0 9.7 32 128-159 18-52 (262)
253 2f6u_A GGGPS, (S)-3-O-geranylg 36.1 29 0.001 29.4 3.7 34 214-247 175-210 (234)
254 2yw3_A 4-hydroxy-2-oxoglutarat 36.1 1.6E+02 0.0055 23.8 8.3 57 95-158 74-130 (207)
255 1me8_A Inosine-5'-monophosphat 35.7 64 0.0022 30.1 6.4 39 45-83 11-60 (503)
256 1tv5_A Dhodehase, dihydroorota 35.3 36 0.0012 31.6 4.5 32 49-81 68-99 (443)
257 1o94_A Tmadh, trimethylamine d 35.2 30 0.001 33.7 4.2 35 215-249 278-313 (729)
258 1nh8_A ATP phosphoribosyltrans 35.1 47 0.0016 29.4 5.0 65 95-159 222-297 (304)
259 3nvt_A 3-deoxy-D-arabino-heptu 35.0 71 0.0024 29.0 6.4 61 91-157 193-254 (385)
260 3q45_A Mandelate racemase/muco 34.7 40 0.0014 30.1 4.6 34 216-249 223-257 (368)
261 3ajx_A 3-hexulose-6-phosphate 34.7 38 0.0013 27.0 4.1 31 218-249 42-77 (207)
262 3fv9_G Mandelate racemase/muco 34.7 91 0.0031 27.9 7.0 34 216-249 231-265 (386)
263 4dpp_A DHDPS 2, dihydrodipicol 34.6 1.4E+02 0.0048 26.8 8.2 84 75-159 64-161 (360)
264 2oog_A Glycerophosphoryl diest 34.1 26 0.00089 29.9 3.2 70 93-162 150-251 (287)
265 4hpn_A Putative uncharacterize 34.0 1.1E+02 0.0037 27.1 7.4 100 126-249 159-261 (378)
266 2ps2_A Putative mandelate race 33.5 1.1E+02 0.0038 26.9 7.3 34 216-249 227-261 (371)
267 3nav_A Tryptophan synthase alp 33.5 1.2E+02 0.004 26.1 7.2 82 127-239 19-108 (271)
268 1y2i_A Hypothetical protein S0 33.5 29 0.00099 26.9 3.0 28 138-165 83-111 (133)
269 1nsj_A PRAI, phosphoribosyl an 33.2 1.3E+02 0.0045 24.5 7.3 34 213-247 137-170 (205)
270 3tml_A 2-dehydro-3-deoxyphosph 33.0 67 0.0023 28.1 5.6 69 83-156 67-135 (288)
271 2ojp_A DHDPS, dihydrodipicolin 32.8 84 0.0029 27.0 6.3 23 137-159 81-103 (292)
272 1zcc_A Glycerophosphodiester p 32.7 60 0.0021 27.0 5.2 70 94-163 115-205 (248)
273 3n9r_A Fructose-bisphosphate a 32.6 45 0.0015 29.5 4.4 38 212-249 188-248 (307)
274 3ngj_A Deoxyribose-phosphate a 32.4 29 0.00099 29.6 3.1 36 214-249 184-222 (239)
275 3q94_A Fructose-bisphosphate a 32.3 47 0.0016 29.1 4.5 60 95-158 36-109 (288)
276 1wdi_A Hypothetical protein TT 32.2 1.2E+02 0.0042 27.2 7.2 70 79-159 181-257 (345)
277 3mz2_A Glycerophosphoryl diest 32.0 68 0.0023 27.6 5.5 69 95-163 146-239 (292)
278 3tj4_A Mandelate racemase; eno 31.8 1.6E+02 0.0056 26.0 8.2 36 214-249 234-270 (372)
279 3ik4_A Mandelate racemase/muco 31.8 90 0.0031 27.7 6.5 115 111-249 138-262 (365)
280 3pm6_A Putative fructose-bisph 31.5 27 0.00092 31.0 2.8 38 212-249 203-244 (306)
281 3m5v_A DHDPS, dihydrodipicolin 31.5 1.7E+02 0.0059 25.1 8.1 84 75-160 13-111 (301)
282 2pgw_A Muconate cycloisomerase 31.4 49 0.0017 29.5 4.6 37 213-249 226-263 (384)
283 3e96_A Dihydrodipicolinate syn 31.3 1.2E+02 0.0042 26.3 7.2 83 75-159 16-113 (316)
284 3vnd_A TSA, tryptophan synthas 31.2 1.7E+02 0.006 24.9 8.0 81 128-239 18-106 (267)
285 2isw_A Putative fructose-1,6-b 31.2 23 0.00079 31.6 2.3 62 94-159 32-105 (323)
286 1vr6_A Phospho-2-dehydro-3-deo 30.9 1.5E+02 0.0053 26.4 7.8 29 95-123 204-232 (350)
287 3inp_A D-ribulose-phosphate 3- 30.8 76 0.0026 26.9 5.5 36 214-249 176-216 (246)
288 1rvg_A Fructose-1,6-bisphospha 30.5 26 0.00088 31.1 2.5 22 137-158 80-101 (305)
289 3fs2_A 2-dehydro-3-deoxyphosph 30.1 55 0.0019 28.8 4.6 69 83-156 91-159 (298)
290 3no3_A Glycerophosphodiester p 30.1 46 0.0016 27.6 4.0 69 95-163 119-207 (238)
291 2uv8_G Fatty acid synthase sub 29.9 1.2E+02 0.0042 33.7 8.0 104 51-162 565-683 (2051)
292 2q5c_A NTRC family transcripti 29.5 46 0.0016 27.0 3.8 86 65-157 61-147 (196)
293 1mzh_A Deoxyribose-phosphate a 29.3 39 0.0013 28.0 3.4 31 218-249 106-145 (225)
294 1mdl_A Mandelate racemase; iso 28.7 63 0.0021 28.4 4.8 36 214-249 226-262 (359)
295 3c8f_A Pyruvate formate-lyase 28.6 2E+02 0.0069 22.6 7.7 82 83-164 77-172 (245)
296 3n9r_A Fructose-bisphosphate a 28.6 23 0.00079 31.4 1.8 60 95-158 32-103 (307)
297 1viz_A PCRB protein homolog; s 28.6 41 0.0014 28.5 3.4 25 136-160 17-41 (240)
298 2l82_A Designed protein OR32; 28.5 35 0.0012 25.9 2.6 31 134-164 8-38 (162)
299 3sho_A Transcriptional regulat 28.0 1.8E+02 0.0061 22.3 7.0 61 101-161 62-123 (187)
300 1m65_A Hypothetical protein YC 28.0 38 0.0013 27.6 3.1 23 141-163 20-42 (245)
301 1vky_A S-adenosylmethionine:tR 27.9 1.2E+02 0.0041 27.3 6.4 72 79-160 183-261 (347)
302 3obe_A Sugar phosphate isomera 27.7 27 0.00091 30.0 2.1 35 127-161 22-58 (305)
303 4e5t_A Mandelate racemase / mu 27.6 81 0.0028 28.4 5.5 36 214-249 245-281 (404)
304 2nwr_A 2-dehydro-3-deoxyphosph 27.5 1.1E+02 0.0039 26.2 6.1 61 90-155 61-121 (267)
305 1geq_A Tryptophan synthase alp 27.4 57 0.002 26.8 4.1 34 216-249 179-213 (248)
306 2yxo_A Histidinol phosphatase; 27.3 43 0.0015 27.6 3.3 24 141-164 18-41 (267)
307 3h4q_A Putative acetyltransfer 27.2 64 0.0022 24.2 4.1 49 129-177 108-161 (188)
308 1aj0_A DHPS, dihydropteroate s 27.2 1.2E+02 0.0039 26.3 6.1 22 138-159 162-185 (282)
309 4ggj_A Mitochondrial cardiolip 27.2 1.1E+02 0.0036 24.6 5.6 43 117-162 52-94 (196)
310 3qfe_A Putative dihydrodipicol 27.0 1.5E+02 0.005 25.9 6.9 32 127-159 82-113 (318)
311 2pju_A Propionate catabolism o 26.7 63 0.0022 27.0 4.2 136 8-157 19-159 (225)
312 3eb2_A Putative dihydrodipicol 26.6 2.2E+02 0.0074 24.4 7.9 85 76-161 10-108 (300)
313 1o60_A 2-dehydro-3-deoxyphosph 26.5 1.4E+02 0.0047 26.0 6.5 63 90-157 75-137 (292)
314 3r0u_A Enzyme of enolase super 26.4 1.3E+02 0.0044 26.8 6.6 36 214-249 225-261 (379)
315 2ekc_A AQ_1548, tryptophan syn 26.3 2.8E+02 0.0097 23.1 9.2 25 136-160 28-52 (262)
316 3kzp_A LMO0111 protein, putati 26.2 57 0.002 26.3 3.8 30 220-249 191-220 (235)
317 4e38_A Keto-hydroxyglutarate-a 25.9 64 0.0022 27.2 4.1 32 218-249 74-106 (232)
318 2dqw_A Dihydropteroate synthas 25.7 1.6E+02 0.0054 25.7 6.7 21 139-159 177-197 (294)
319 3noy_A 4-hydroxy-3-methylbut-2 25.6 1.8E+02 0.006 26.4 7.1 63 136-249 43-105 (366)
320 1z4e_A Transcriptional regulat 25.6 66 0.0023 23.2 3.8 39 139-177 105-143 (153)
321 2nql_A AGR_PAT_674P, isomerase 25.5 71 0.0024 28.5 4.6 36 214-249 245-281 (388)
322 3tha_A Tryptophan synthase alp 25.5 66 0.0023 27.5 4.2 30 218-247 189-219 (252)
323 3l23_A Sugar phosphate isomera 25.3 34 0.0012 29.2 2.3 33 128-160 15-50 (303)
324 3tqp_A Enolase; energy metabol 25.1 58 0.002 30.0 4.0 36 214-249 290-329 (428)
325 2qjg_A Putative aldolase MJ040 25.0 2.9E+02 0.0099 22.7 11.6 31 214-244 188-221 (273)
326 3i4k_A Muconate lactonizing en 25.0 98 0.0034 27.6 5.4 36 214-249 231-267 (383)
327 3txv_A Probable tagatose 6-pho 24.9 72 0.0024 29.8 4.5 36 214-249 241-282 (450)
328 3sjn_A Mandelate racemase/muco 24.9 1.2E+02 0.0041 26.9 6.0 34 215-248 232-266 (374)
329 1o66_A 3-methyl-2-oxobutanoate 24.7 83 0.0028 27.3 4.7 22 139-160 158-182 (275)
330 3mwc_A Mandelate racemase/muco 24.3 96 0.0033 27.9 5.3 36 214-249 241-277 (400)
331 2ovl_A Putative racemase; stru 24.3 61 0.0021 28.7 3.9 36 214-249 228-264 (371)
332 1vd6_A Glycerophosphoryl diest 24.3 36 0.0012 27.8 2.2 24 140-163 174-197 (224)
333 3jvn_A Acetyltransferase; alph 23.9 65 0.0022 23.3 3.5 39 139-177 108-146 (166)
334 3ndo_A Deoxyribose-phosphate a 23.8 67 0.0023 27.1 3.8 36 214-249 174-212 (231)
335 1oy0_A Ketopantoate hydroxymet 23.6 1.2E+02 0.0041 26.4 5.5 21 140-160 177-200 (281)
336 4h83_A Mandelate racemase/muco 23.5 1.1E+02 0.0037 27.3 5.5 33 217-249 250-283 (388)
337 3daq_A DHDPS, dihydrodipicolin 23.5 2.8E+02 0.0096 23.6 8.0 83 76-160 9-105 (292)
338 3nk6_A 23S rRNA methyltransfer 23.5 2.1E+02 0.0073 24.4 7.1 57 102-160 96-152 (277)
339 1tqj_A Ribulose-phosphate 3-ep 23.5 2.1E+02 0.0073 23.4 7.0 25 136-160 14-38 (230)
340 3viv_A 441AA long hypothetical 23.4 72 0.0025 26.7 4.0 25 140-164 26-50 (230)
341 2oz8_A MLL7089 protein; struct 23.3 81 0.0028 28.1 4.5 36 214-249 229-265 (389)
342 3fok_A Uncharacterized protein 23.2 2.2E+02 0.0075 25.1 7.2 87 71-159 173-273 (307)
343 1ps9_A 2,4-dienoyl-COA reducta 23.0 3.5E+02 0.012 25.6 9.3 19 66-84 9-27 (671)
344 4gel_A Mitochondrial cardiolip 23.0 1.2E+02 0.0042 24.1 5.3 44 118-164 65-108 (220)
345 3i6e_A Muconate cycloisomerase 23.0 1.1E+02 0.0039 27.2 5.5 36 214-249 229-265 (385)
346 2otd_A Glycerophosphodiester p 22.9 46 0.0016 27.6 2.6 23 141-163 196-218 (247)
347 2xhz_A KDSD, YRBH, arabinose 5 22.6 1.4E+02 0.0047 22.9 5.4 38 125-162 96-133 (183)
348 1x60_A Sporulation-specific N- 22.4 1.1E+02 0.0037 20.4 4.1 31 129-159 45-77 (79)
349 3t9y_A Acetyltransferase, GNAT 22.4 70 0.0024 22.5 3.3 39 139-177 100-140 (150)
350 2pz0_A Glycerophosphoryl diest 22.3 46 0.0016 27.8 2.5 69 94-162 132-221 (252)
351 2y5s_A DHPS, dihydropteroate s 22.3 1.5E+02 0.0052 25.7 6.0 22 138-159 170-193 (294)
352 1rd5_A Tryptophan synthase alp 21.9 98 0.0034 25.8 4.6 34 216-249 189-223 (262)
353 2jvr_A Nucleolar protein 3; RN 21.9 81 0.0028 23.0 3.6 36 212-247 37-85 (111)
354 1tqx_A D-ribulose-5-phosphate 21.8 3.1E+02 0.011 22.6 7.7 36 214-249 158-194 (227)
355 4a35_A Mitochondrial enolase s 21.7 1.8E+02 0.0061 26.6 6.6 123 103-249 186-321 (441)
356 3r12_A Deoxyribose-phosphate a 21.7 77 0.0026 27.3 3.8 36 214-249 200-238 (260)
357 3dg3_A Muconate cycloisomerase 21.5 1.8E+02 0.006 25.6 6.4 35 215-249 223-258 (367)
358 1tx2_A DHPS, dihydropteroate s 21.5 1.4E+02 0.0049 26.0 5.6 21 139-159 182-204 (297)
359 4djd_C C/Fe-SP, corrinoid/iron 21.5 1.4E+02 0.0047 27.8 5.7 77 72-162 153-235 (446)
360 2qgy_A Enolase from the enviro 21.4 1E+02 0.0034 27.5 4.8 36 214-249 231-267 (391)
361 3qld_A Mandelate racemase/muco 21.2 1.6E+02 0.0053 26.4 6.0 35 214-248 226-261 (388)
362 2ekc_A AQ_1548, tryptophan syn 21.2 80 0.0027 26.7 3.9 27 218-244 196-223 (262)
363 2og9_A Mandelate racemase/muco 21.1 1E+02 0.0035 27.5 4.8 36 214-249 244-280 (393)
364 1o1z_A GDPD, glycerophosphodie 21.1 2.4E+02 0.0083 23.0 6.8 22 142-163 188-209 (234)
365 3tr9_A Dihydropteroate synthas 21.1 1.3E+02 0.0045 26.5 5.3 21 139-159 177-199 (314)
366 1f6y_A 5-methyltetrahydrofolat 20.9 1.8E+02 0.0063 24.6 6.1 22 139-160 138-161 (262)
367 3h6g_A Glutamate receptor, ion 20.9 3.2E+02 0.011 23.3 7.9 64 93-162 84-147 (395)
368 3tjl_A NADPH dehydrogenase; OL 20.6 16 0.00055 33.6 -0.8 33 216-248 301-334 (407)
369 3td9_A Branched chain amino ac 20.6 2.1E+02 0.007 24.1 6.5 61 93-159 94-155 (366)
370 3lmz_A Putative sugar isomeras 20.6 2E+02 0.0068 23.2 6.2 84 72-159 15-109 (257)
371 4evy_A Aminoglycoside N(6')-ac 20.5 73 0.0025 23.4 3.1 38 139-176 115-152 (166)
372 2anu_A Hypothetical protein TM 20.5 70 0.0024 26.6 3.3 21 140-160 36-56 (255)
373 2wje_A CPS4B, tyrosine-protein 20.4 52 0.0018 27.2 2.5 27 137-163 22-48 (247)
374 4fnq_A Alpha-galactosidase AGA 20.4 47 0.0016 32.7 2.4 43 128-172 335-377 (729)
375 1xx1_A Smase I, sphingomyelina 20.1 31 0.0011 29.2 1.0 26 139-164 209-236 (285)
376 1yy3_A S-adenosylmethionine:tR 20.1 1.6E+02 0.0054 26.5 5.6 109 40-160 143-258 (346)
No 1
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=100.00 E-value=2e-72 Score=518.36 Aligned_cols=236 Identities=39% Similarity=0.646 Sum_probs=215.7
Q ss_pred CCChHHHHHHHHHhCChhhhhhhccCccchHHHHHHHHhhcccceeccccCCCCCCccceeecCcccccceeeccccccc
Q 025657 7 ITNVMEYEALAKEKLPKMVYDYYASGAEDQWTLQENRNAFSRILFRPRILRDVSKIDMTTTVLGFNISMPIMIAPTAFQK 86 (249)
Q Consensus 7 ~~~i~d~e~~A~~~Lp~~~~~Y~~gGa~de~t~~~N~~af~~~~l~pr~l~~v~~~d~st~llG~~~~~Pi~iaP~g~~~ 86 (249)
++|++|||++||++||+.+|+||+|||+||.|+++|++||++|+|+||+|+||+++||+|+|||+++++||+|||+|+++
T Consensus 2 ~~~~~d~~~~A~~~lp~~~~~Y~~~ga~~e~t~~~N~~af~~~~l~prvl~dv~~~d~~t~llG~~~~~P~~iaP~g~~~ 81 (352)
T 3sgz_A 2 LVCLADFKAHAQKQLSKTSWDFIEGEADDGITYSENIAAFKRIRLRPRYLRDMSKVDTRTTIQGQEISAPICISPTAFHS 81 (352)
T ss_dssp CCSHHHHHHHHHHTSCHHHHHHHHCCCTTCHHHHHHHHHHHTCCBCCCCSSCCSSCBCCEEETTEEESSSEEECCCSCGG
T ss_pred CCCHHHHHHHHHHHCCHHHHHHHhcCCcchHHHHHHHHHHHhceeeccccCCCCCCCCceEECCcccCCcceechHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCChhhHHHHHHHHhcCCcEEecCCCCCCHHHHHhcCC-CceeEEEccccChHHHHHHHHHHHHcCCcEEEEeecCCCC
Q 025657 87 MAHPEGECATARAASAAGTIMTLSSWATSSVEEVSSTGP-GIRFFQLYVTKHRNVDAQLVKRAERAGFKAIALTVDTPRL 165 (249)
Q Consensus 87 l~h~~gE~~~AraA~~~gi~~~lss~ss~sleeia~~~~-~~~wfQlY~~~d~~~~~~li~rA~~aG~~alvvTvD~p~~ 165 (249)
|+||+||+++||||+++||||++||.|++|+|||+++.+ ++.|||||+++|++.++++|+||+++||+|||||||+|+.
T Consensus 82 l~~~~ge~~~araa~~~gi~~~lSt~ss~s~e~v~~~~~~~~~wfQlY~~~d~~~~~~l~~ra~~aG~~alvlTvD~p~~ 161 (352)
T 3sgz_A 82 IAWPDGEKSTARAAQEANICYVISSYASYSLEDIVAAAPEGFRWFQLYMKSDWDFNKQMVQRAEALGFKALVITIDTPVL 161 (352)
T ss_dssp GTCTTHHHHHHHHHHHHTCEEEECTTCSSCHHHHHHHSTTCEEEEECCCCSCHHHHHHHHHHHHHTTCCCEEEECSCSSC
T ss_pred hcCccHHHHHHHHHHHcCCCeEeCCCCCCCHHHHHHhccCccceeccccCCCHHHHHHHHHHHHHcCCCEEEEEeCCCCC
Confidence 999999999999999999999999999999999998877 6899999999999999999999999999999999999999
Q ss_pred CCchhhhhccCCCCCccccccccccccCCCCCCCCchhhhHhhhhcCCCCCHHHHHHHHHhCCCCEEEEccCCHHHHHHH
Q 025657 166 GRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKGVLTAEDGSKL 245 (249)
Q Consensus 166 g~Re~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tW~dl~wlr~~~~lPivlKGIl~~eDA~~A 245 (249)
|+||+|+||+|.+|++++++++.... ......+ .....+++.++|++|+|||+.|++||++|||+++|||++|
T Consensus 162 g~R~~d~r~~~~~p~~~~~~~~~~~~----~~~~~~~---~~~~~~d~~~~w~~i~~lr~~~~~PvivK~v~~~e~A~~a 234 (352)
T 3sgz_A 162 GNRRRDKRNQLNLEANILKAALRALK----EEKPTQS---VPVLFPKASFCWNDLSLLQSITRLPIILKGILTKEDAELA 234 (352)
T ss_dssp CCCHHHHHHHHHSCHHHHTTCC----------------------CCCTTCCHHHHHHHHHHCCSCEEEEEECSHHHHHHH
T ss_pred CcchhhhhcCCCCCcccchhhhcccc----cccccch---hhhhccCCCCCHHHHHHHHHhcCCCEEEEecCcHHHHHHH
Confidence 99999999999999888877765421 0001111 1225678999999999999999999999999999999999
Q ss_pred hhCC
Q 025657 246 LSKE 249 (249)
Q Consensus 246 ~~~~ 249 (249)
+++|
T Consensus 235 ~~~G 238 (352)
T 3sgz_A 235 MKHN 238 (352)
T ss_dssp HHTT
T ss_pred HHcC
Confidence 9987
No 2
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=100.00 E-value=1.8e-60 Score=445.42 Aligned_cols=245 Identities=51% Similarity=0.852 Sum_probs=217.1
Q ss_pred ccCCChHHHHHHHHHhCChhhhhhhccCccchHHHHHHHHhhcccceeccccCCCCCCccceeecCcccccceeeccccc
Q 025657 5 SEITNVMEYEALAKEKLPKMVYDYYASGAEDQWTLQENRNAFSRILFRPRILRDVSKIDMTTTVLGFNISMPIMIAPTAF 84 (249)
Q Consensus 5 ~~~~~i~d~e~~A~~~Lp~~~~~Y~~gGa~de~t~~~N~~af~~~~l~pr~l~~v~~~d~st~llG~~~~~Pi~iaP~g~ 84 (249)
..++|++|||+.||++||+.+|+|++||++||.|+++|+++|++|+|+||+|+|++++||+|+|||+++++||+|||||+
T Consensus 25 ~~~~~~~d~~~~A~~~lp~~~~~y~~~ga~~e~t~~~N~~~f~~i~l~pr~L~~~~~~d~st~i~G~~l~~Pi~iAPmg~ 104 (392)
T 2nzl_A 25 PRLICINDYEQHAKSVLPKSIYDYYRSGANDEETLADNIAAFSRWKLYPRMLRNVAETDLSTSVLGQRVSMPICVGATAM 104 (392)
T ss_dssp -CCCSHHHHHHHHHHHSCHHHHHHHHCCSTTCHHHHHHHHHHHHSCBCCCCSSCCTTCBCCEEETTEEESSSEEECCCSC
T ss_pred ccCCCHHHHHHHHHhhCCHHHHhhcCCCCCccHHHHHHHHhhheEEeehhhccCCcCCCcceEECCEecCCceEeccccc
Confidence 45789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCChhhHHHHHHHHhcCCcEEecCCCCCCHHHHHhcCC-CceeEEEccccChHHHHHHHHHHHHcCCcEEEEeecCC
Q 025657 85 QKMAHPEGECATARAASAAGTIMTLSSWATSSVEEVSSTGP-GIRFFQLYVTKHRNVDAQLVKRAERAGFKAIALTVDTP 163 (249)
Q Consensus 85 ~~l~h~~gE~~~AraA~~~gi~~~lss~ss~sleeia~~~~-~~~wfQlY~~~d~~~~~~li~rA~~aG~~alvvTvD~p 163 (249)
+++.||++|.++|++|+++|++|++|+++++++|||++..+ ++.|||||+++|++.+.++++||+++||++|+||+|+|
T Consensus 105 ~~l~~~~~e~~laraA~~~G~~~~~s~~~s~~le~v~~~~~~~~~~~QLy~~~d~~~~~~~~~ra~~~G~~al~itvd~p 184 (392)
T 2nzl_A 105 QRMAHVDGELATVRACQSLGTGMMLSSWATSSIEEVAEAGPEALRWLQLYIYKDREVTKKLVRQAEKMGYKAIFVTVDTP 184 (392)
T ss_dssp GGGTSTTHHHHHHHHHHHHTCEEEECTTCSSCHHHHHHHCTTSEEEEEECCBSSHHHHHHHHHHHHHTTCCCEEEECSCS
T ss_pred cccccchHHHHHHHHHHHcCCCeeccchHHHHHHHHHHhcCCCcEEEEEEecCCHHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 99999999999999999999999999999999999987654 78999999999999999999999999999999999999
Q ss_pred CCCCchhhhhccCCCCCccccccccccccC--CCCC-CCCchhhhHhhhhcCCCCCHHHHHHHHHhCCCCEEEEccCCHH
Q 025657 164 RLGRREADIKNRFVLPPHLTLKNYEGLYIG--KMDK-TDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKGVLTAE 240 (249)
Q Consensus 164 ~~g~Re~d~r~~~~~p~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~tW~dl~wlr~~~~lPivlKGIl~~e 240 (249)
+.|+|++|+||+|.+|++++++|+.....+ .... ....+...++...+++.++|++|+|||+.|++||++|||+++|
T Consensus 185 ~~g~R~~d~r~~~~lp~~~~~~n~~~~~~~~~p~~~~~~g~~~~~~~~~~~d~~~~~~~i~~lr~~~~~PvivKgv~~~e 264 (392)
T 2nzl_A 185 YLGNRLDDVRNRFKLPPQLRMKNFETSTLSFSPEENFGDDSGLAAYVAKAIDPSISWEDIKWLRRLTSLPIVAKGILRGD 264 (392)
T ss_dssp SCCCCHHHHHHTCCCCTTCCCTTC-----------------CHHHHHHHHBCTTCCHHHHHHHC--CCSCEEEEEECCHH
T ss_pred CccchhHhHhhccCCccccchhhhhhhhcccCccccccCcchHHHHHhhcCChHHHHHHHHHHHHhhCCCEEEEecCCHH
Confidence 999999999999999998877765321000 0000 1122234566667799999999999999999999999999999
Q ss_pred HHHHHhhCC
Q 025657 241 DGSKLLSKE 249 (249)
Q Consensus 241 DA~~A~~~~ 249 (249)
||++|.++|
T Consensus 265 ~A~~a~~aG 273 (392)
T 2nzl_A 265 DAREAVKHG 273 (392)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHHHcC
Confidence 999999987
No 3
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=100.00 E-value=3.2e-58 Score=428.70 Aligned_cols=244 Identities=40% Similarity=0.709 Sum_probs=218.1
Q ss_pred ccCCChHHHHHHHHHhCChhhhhhhccCccchHHHHHHHHhhcccceeccccCCCCCCccceeecCcccccceeeccccc
Q 025657 5 SEITNVMEYEALAKEKLPKMVYDYYASGAEDQWTLQENRNAFSRILFRPRILRDVSKIDMTTTVLGFNISMPIMIAPTAF 84 (249)
Q Consensus 5 ~~~~~i~d~e~~A~~~Lp~~~~~Y~~gGa~de~t~~~N~~af~~~~l~pr~l~~v~~~d~st~llG~~~~~Pi~iaP~g~ 84 (249)
.+++|++|||+.||++||+.+|+||+||++||.|+++|+.+|++|+|+||+|+|++++||+|+|||+++++||+|||||+
T Consensus 3 ~~~~~~~d~~~~A~~~l~~~~~~y~~~ga~~~~t~~~n~~~f~~i~l~pr~L~~~~~~d~st~i~G~~l~~Pv~iap~~~ 82 (380)
T 1p4c_A 3 QNLFNVEDYRKLAQKRLPKMVYDYLEGGAEDEYGVKHNRDVFQQWRFKPKRLVDVSRRSLQAEVLGKRQSMPLLIGPTGL 82 (380)
T ss_dssp -CCSSHHHHHHHHHHHSCHHHHHHHHCCSTTCHHHHHHHHGGGGEEECCCCSCCCSSCBCCEEETTEEESSSEEECCCSC
T ss_pred CcCCCHHHHHHHHHHhCCHHHHHHhCCCCCccHHHHHHHHHHhheeeeccccCCCccCcceeEECCeecCCceEecCccc
Confidence 35789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCChhhHHHHHHHHhcCCcEEecCCCCCCHHHHHhcCCCceeEEEccccChHHHHHHHHHHHHcCCcEEEEeecCCC
Q 025657 85 QKMAHPEGECATARAASAAGTIMTLSSWATSSVEEVSSTGPGIRFFQLYVTKHRNVDAQLVKRAERAGFKAIALTVDTPR 164 (249)
Q Consensus 85 ~~l~h~~gE~~~AraA~~~gi~~~lss~ss~sleeia~~~~~~~wfQlY~~~d~~~~~~li~rA~~aG~~alvvTvD~p~ 164 (249)
++++||++|.++|++|+++|+++++|+.+++++|+|++...++.|||||+++ ++.+.++++||+++||++++||||+|+
T Consensus 83 ~~~~~~~~~~~~a~aa~~~G~~~~vss~s~~~le~i~~~~~~~~~fQly~~~-~~~~~~~i~~a~~aG~~al~vTvd~p~ 161 (380)
T 1p4c_A 83 NGALWPKGDLALARAATKAGIPFVLSTASNMSIEDLARQCDGDLWFQLYVIH-REIAQGMVLKALHTGYTTLVLTTDVAV 161 (380)
T ss_dssp GGGTSTTHHHHHHHHHHHHTCCEEECTTCSSCHHHHHHHCCSCEEEEECCSS-HHHHHHHHHHHHHTTCCEEEEECSCSS
T ss_pred cccCCCcHHHHHHHHHHHcCCCeecCccccCCHHHHHhccCCCeEEEEEech-HHHHHHHHHHHHHcCCCEEEEeecCcc
Confidence 9999999999999999999999999999999999998765678999999999 999999999999999999999999999
Q ss_pred CCCchhhhhccCCCCCccccccccccccCCCCCCCCchhhhHhhhhcCCCCCHHHHHHHHHhCCCCEEEEccCCHHHHHH
Q 025657 165 LGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKGVLTAEDGSK 244 (249)
Q Consensus 165 ~g~Re~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tW~dl~wlr~~~~lPivlKGIl~~eDA~~ 244 (249)
.|+|++|+|++|.+|..++..++....+.++.......+..++...++|.++|+.|+|+|+.|++||++|||+++|||++
T Consensus 162 ~g~r~~d~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~ala~~~~~~~~p~~~~~~i~~i~~~~~~Pv~vkgv~t~e~a~~ 241 (380)
T 1p4c_A 162 NGYRERDLHNRFKIPPFLTLKNFEGIDLGKMDKANLEMQAALMSRQMDASFNWEALRWLRDLWPHKLLVKGLLSAEDADR 241 (380)
T ss_dssp CCCCHHHHHHTCCCCTTCCCGGGTTCCCSCCSSTTTTTHHHHTSSCCCTTCCHHHHHHHHHHCCSEEEEEEECCHHHHHH
T ss_pred ccchhHHHhcCCCCccccCHHHhhhhhhhccCcccchHHHHHHHhhcCccccHHHHHHHHHhcCCCEEEEecCcHHHHHH
Confidence 99999999999988876666554211111111122222333445566899999999999999999999999999999999
Q ss_pred HhhCC
Q 025657 245 LLSKE 249 (249)
Q Consensus 245 A~~~~ 249 (249)
|.++|
T Consensus 242 a~~aG 246 (380)
T 1p4c_A 242 CIAEG 246 (380)
T ss_dssp HHHTT
T ss_pred HHHcC
Confidence 99987
No 4
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=100.00 E-value=1.2e-58 Score=429.95 Aligned_cols=240 Identities=30% Similarity=0.525 Sum_probs=201.6
Q ss_pred cccCCChHHHHHHHHHhCChhhhhhhccCccchHHHHHHHHhhcccceeccccCCCCCCccceeecCcccccceeecccc
Q 025657 4 ISEITNVMEYEALAKEKLPKMVYDYYASGAEDQWTLQENRNAFSRILFRPRILRDVSKIDMTTTVLGFNISMPIMIAPTA 83 (249)
Q Consensus 4 ~~~~~~i~d~e~~A~~~Lp~~~~~Y~~gGa~de~t~~~N~~af~~~~l~pr~l~~v~~~d~st~llG~~~~~Pi~iaP~g 83 (249)
+..++|++|||+.||++||+.+|+|++||++||.|+++|+.+|++|+|+||+|+|++++||+|+|||+++++||+|||||
T Consensus 10 ~~~~~~~~d~~~~A~~~l~~~~~~y~~~ga~~~~t~~~N~~~f~~i~l~pr~L~~~~~~d~st~i~G~~l~~Pi~iAPma 89 (368)
T 2nli_A 10 YIDVVNTYDLEEEASKVVPHGGFNYIAGASGDEWTKRANDRAWKHKLLYPRLAQDVEAPDTSTEILGHKIKAPFIMAPIA 89 (368)
T ss_dssp CCCCSCSHHHHHHHHTTSCHHHHHHHHCCSBTSHHHHHHHHGGGGEEECCCCCCCCSCCCCCEEETTEEESSSEEECCCS
T ss_pred hccCCCHHHHHHHHHHhCCHHHHhhcccCCCccHHHHHHHHHHhheeeeccccCCCccCCcceEECCEecCCceeecchh
Confidence 35678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCChhhHHHHHHHHhcCCcEEecCCCCCCHHHHHhcC-CCceeEEEccccChHHHHHHHHHHHHcCCcEEEEeecC
Q 025657 84 FQKMAHPEGECATARAASAAGTIMTLSSWATSSVEEVSSTG-PGIRFFQLYVTKHRNVDAQLVKRAERAGFKAIALTVDT 162 (249)
Q Consensus 84 ~~~l~h~~gE~~~AraA~~~gi~~~lss~ss~sleeia~~~-~~~~wfQlY~~~d~~~~~~li~rA~~aG~~alvvTvD~ 162 (249)
++++.||+||.++|++|+++|++|++|+++++++|+|++.. .++.|||||+++|++.+.++++||+++||++|+||+|+
T Consensus 90 ~~g~~~~~~e~~la~aa~~~G~~~~~s~~~s~~le~v~~~~~~~~~~~QLy~~~d~~~~~~~~~ra~~aG~~ai~it~d~ 169 (368)
T 2nli_A 90 AHGLAHTTKEAGTARAVSEFGTIMSISAYSGATFEEISEGLNGGPRWFQIYMAKDDQQNRDILDEAKSDGATAIILTADS 169 (368)
T ss_dssp CGGGTCTTHHHHHHHHHHHHTCCEEECTTCSSCHHHHHHHHTTCCEEEEECCBSSHHHHHHHHHHHHHTTCSCEEEESBC
T ss_pred hccCCCcHHHHHHHHHHHHcCCCEEeechHhHHHHHHHHhCCCCCEEEEEeccCCHHHHHHHHHHHHHCCCCEEEEcCCC
Confidence 99999999999999999999999999999999999998754 47899999999999999999999999999999999999
Q ss_pred CCCCCchhhhhccCCCCCccccccccccccCCCCCCCCchhhhHhhhhcCCCCCHHHHHHHHHhCCCCEEEEccCCHHHH
Q 025657 163 PRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKGVLTAEDG 242 (249)
Q Consensus 163 p~~g~Re~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tW~dl~wlr~~~~lPivlKGIl~~eDA 242 (249)
|+.|+|++|+||+|.+| ++++++... ..+ ...+..+ .++....++.++|++|+|||+.|++||++|||+++|||
T Consensus 170 p~~g~r~~d~~~~~~~p--~~~~~~~~~-~~~--~~~g~~l-~~~~~~~d~~~~~~~i~~lr~~~~~PvivK~v~~~e~a 243 (368)
T 2nli_A 170 TVSGNRDRDVKNKFVYP--FGMPIVQRY-LRG--TAEGMSL-NNIYGASKQKISPRDIEEIAGHSGLPVFVKGIQHPEDA 243 (368)
T ss_dssp C---CBC--------CC--SCCHHHHHH-HTT--SGGGC------CTTBCSBCCHHHHHHHHHHSSSCEEEEEECSHHHH
T ss_pred CcccchhHHHhhcccCc--chhhhhhcc-ccc--CCCCchH-HhhhhccCchhhHHHHHHHHHHcCCCEEEEcCCCHHHH
Confidence 99999999999999888 443443210 000 0001111 22233457899999999999999999999999999999
Q ss_pred HHHhhCC
Q 025657 243 SKLLSKE 249 (249)
Q Consensus 243 ~~A~~~~ 249 (249)
++|.++|
T Consensus 244 ~~a~~~G 250 (368)
T 2nli_A 244 DMAIKRG 250 (368)
T ss_dssp HHHHHTT
T ss_pred HHHHHcC
Confidence 9999987
No 5
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=100.00 E-value=1.3e-57 Score=423.15 Aligned_cols=244 Identities=85% Similarity=1.239 Sum_probs=219.7
Q ss_pred cCCChHHHHHHHHHhCChhhhhhhccCccchHHHHHHHHhhcccceeccccCCCCCCccceeecCcccccceeecccccc
Q 025657 6 EITNVMEYEALAKEKLPKMVYDYYASGAEDQWTLQENRNAFSRILFRPRILRDVSKIDMTTTVLGFNISMPIMIAPTAFQ 85 (249)
Q Consensus 6 ~~~~i~d~e~~A~~~Lp~~~~~Y~~gGa~de~t~~~N~~af~~~~l~pr~l~~v~~~d~st~llG~~~~~Pi~iaP~g~~ 85 (249)
+++|++|||+.||++||+.+|+||+||++||.|+++|+++|++|+|+||+|+|++++||+|+|||+++++||+|||||++
T Consensus 3 ~~~~~~d~~~~A~~~l~~~~~~y~~~ga~~~~t~~~N~~~f~~i~l~pr~l~~~~~~d~~t~i~G~~~~~Pi~iAPmg~~ 82 (370)
T 1gox_A 3 EITNVNEYEAIAKQKLPKMVYDYYASGAEDQWTLAENRNAFSRILFRPRILIDVTNIDMTTTILGFKISMPIMIAPTAMQ 82 (370)
T ss_dssp CCCSTTHHHHHHHHHSCHHHHHHHHCCSTTCHHHHHHHHGGGGEEECCCCSCCCSCCBCCEEETTEEESSSEEECCCSCG
T ss_pred cCCCHHHHHHHHHHhCCHHHHhhhCCCCCccHHHHHHHHHHhhheeeccccCCCCCCCCceEECCcccCCceeEcccchh
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCChhhHHHHHHHHhcCCcEEecCCCCCCHHHHHhcCCCceeEEEccccChHHHHHHHHHHHHcCCcEEEEeecCCCC
Q 025657 86 KMAHPEGECATARAASAAGTIMTLSSWATSSVEEVSSTGPGIRFFQLYVTKHRNVDAQLVKRAERAGFKAIALTVDTPRL 165 (249)
Q Consensus 86 ~l~h~~gE~~~AraA~~~gi~~~lss~ss~sleeia~~~~~~~wfQlY~~~d~~~~~~li~rA~~aG~~alvvTvD~p~~ 165 (249)
.+.||++|.++|++|+++|++|++|+++++++|||+++.+++.|||||+.+|++.+.++++|++++||++|+||+|+|+.
T Consensus 83 ~l~~~~~e~a~a~aa~~~G~~~~~s~~~~~~ieev~~~~~~~~~~QLy~~~d~~~~~~~~~~a~~~G~~ai~it~d~p~~ 162 (370)
T 1gox_A 83 KMAHPEGEYATARAASAAGTIMTLSSWATSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRL 162 (370)
T ss_dssp GGTCTTHHHHHHHHHHHTTCCEEECTTCSSCHHHHHTTCCCCEEEEECCBSSHHHHHHHHHHHHHTTCCEEEEECSCSSC
T ss_pred hhccchHHHHHHHHHHHcCCCeeccCCCCCCHHHHHhhcCCCceEEEecCCCchHHHHHHHHHHHCCCCEEEEeCCCCcc
Confidence 99999999999999999999999999999999999987778899999999999999999999999999999999999999
Q ss_pred CCchhhhhccCCCCCccccccccccccCCCCCCCCchhhhHhhhhcCCCCCHHHHHHHHHhCCCCEEEEccCCHHHHHHH
Q 025657 166 GRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKGVLTAEDGSKL 245 (249)
Q Consensus 166 g~Re~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tW~dl~wlr~~~~lPivlKGIl~~eDA~~A 245 (249)
|+|++|+|++|.+|.+++++++............+.....++....++.++|++|+|+|+.|++||++||++++|||++|
T Consensus 163 g~r~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~~~~~~~~~~i~~l~~~~~~pv~vK~~~~~e~a~~a 242 (370)
T 1gox_A 163 GRREADIKNRFVLPPFLTLKNFEGIDLGKMDKANDSGLSSYVAGQIDRSLSWKDVAWLQTITSLPILVKGVITAEDARLA 242 (370)
T ss_dssp CCCHHHHHTTCCCCTTCCCGGGSSSCCC---------HHHHHHHTBCTTCCHHHHHHHHHHCCSCEEEECCCSHHHHHHH
T ss_pred cccHHHHHhccCCCcccchhhhhhhhhhccccccCccHHHHHHhhcCccchHHHHHHHHHHhCCCEEEEecCCHHHHHHH
Confidence 99999999999999887776664321111111122223335555678999999999999999999999999999999999
Q ss_pred hhCC
Q 025657 246 LSKE 249 (249)
Q Consensus 246 ~~~~ 249 (249)
.++|
T Consensus 243 ~~~G 246 (370)
T 1gox_A 243 VQHG 246 (370)
T ss_dssp HHTT
T ss_pred HHcC
Confidence 9987
No 6
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=100.00 E-value=3.3e-56 Score=428.82 Aligned_cols=239 Identities=38% Similarity=0.613 Sum_probs=213.1
Q ss_pred ccCCChHHHHHHHHHhCChhhhhhhccCccchHHHHHHHHhhcccceeccccCCCCCCccceeecCcccccceeeccccc
Q 025657 5 SEITNVMEYEALAKEKLPKMVYDYYASGAEDQWTLQENRNAFSRILFRPRILRDVSKIDMTTTVLGFNISMPIMIAPTAF 84 (249)
Q Consensus 5 ~~~~~i~d~e~~A~~~Lp~~~~~Y~~gGa~de~t~~~N~~af~~~~l~pr~l~~v~~~d~st~llG~~~~~Pi~iaP~g~ 84 (249)
..++|++|||++||++||+.+|+||+|||+||.|+++|+++|++|+|+||+|+|++++||+|+|||+++++||+||||++
T Consensus 120 ~~~~~~~d~~~~A~~~l~~~~~~y~~~ga~~e~t~~~N~~af~~i~l~pr~L~dv~~~d~st~i~G~~l~~Pi~iAPma~ 199 (511)
T 1kbi_A 120 DNIINLYDFEYLASQTLTKQAWAYYSSGANDEVTHRENHNAYHRIFFKPKILVDVRKVDISTDMLGSHVDVPFYVSATAL 199 (511)
T ss_dssp GGCCSHHHHHHHHHHHSCHHHHHHHHCCSTTCHHHHHHHHGGGGCEECCCCSCCCSSCBCCEEETTEEESSSEEECCCSC
T ss_pred cccCCHHHHHHHHHhhCCHHHhhhccCCCCchhHHHHHHHHhhhhccccccccCcccccCccccCCccCCCCeEeccchh
Confidence 45789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCC-hhhHHHHHHHHh--cCCcEEecCCCCCCHHHHHhcC---CCceeEEEccccChHHHHHHHHHHHHcCCcEEEE
Q 025657 85 QKMAHP-EGECATARAASA--AGTIMTLSSWATSSVEEVSSTG---PGIRFFQLYVTKHRNVDAQLVKRAERAGFKAIAL 158 (249)
Q Consensus 85 ~~l~h~-~gE~~~AraA~~--~gi~~~lss~ss~sleeia~~~---~~~~wfQlY~~~d~~~~~~li~rA~~aG~~alvv 158 (249)
++|+|| ++|+++|++|++ +|++|++|+++++|+|+|++.. .++.|||||+.+|++.+.++++||+++||++|+|
T Consensus 200 ~~l~~~~~~e~alaraA~~~~~G~~~~~s~~a~~s~e~v~~~~~~~~~~~~~QLy~~~d~~~~~~~~~rae~aG~~al~i 279 (511)
T 1kbi_A 200 CKLGNPLEGEKDVARGCGQGVTKVPQMISTLASCSPEEIIEAAPSDKQIQWYQLYVNSDRKITDDLVKNVEKLGVKALFV 279 (511)
T ss_dssp GGGTCTTTTHHHHHHHHHSSSSCCCEEECTTCSSCHHHHHHTCCCSSCCEEEEECCCSSHHHHHHHHHHHHHHTCSCEEE
T ss_pred ccccChhhHHHHHHHHHHHhCCCeeEEeCCcccCCHHHHHhhcCCCCCCeEEEEeecCCHHHHHHHHHHHHHcCCCEEEE
Confidence 999999 999999999999 9999999999999999998765 2678999999999999999999999999999999
Q ss_pred eecCCCCCCchhhhhccCCCCCccccccccccccCCCCCCCCchhhhHhhhhcCCCCCHHHHHHHHHhCCCCEEEEccCC
Q 025657 159 TVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKGVLT 238 (249)
Q Consensus 159 TvD~p~~g~Re~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tW~dl~wlr~~~~lPivlKGIl~ 238 (249)
|||+|+.|+|++|+||+|..|... ...+.+ .......+...++...+++.++|++|+|||+.|++||++|||++
T Consensus 280 tvd~p~~g~R~~~~r~g~~~p~~~-~~~~~g-----~~~~~~~g~~~~~~~~~d~~~~~~~i~~lr~~~~~PvivKgv~~ 353 (511)
T 1kbi_A 280 TVDAPSLGQREKDMKLKFSNTKAG-PKAMKK-----TNVEESQGASRALSKFIDPSLTWKDIEELKKKTKLPIVIKGVQR 353 (511)
T ss_dssp ECSCSSCCCCHHHHHHHHTTCC--------C-----CCCSSCCCGGGGCBTTBCTTCCHHHHHHHHHHCSSCEEEEEECS
T ss_pred eCCCCCccccHHHHhccCCCCccc-cccccc-----ccccccccHHHHHhhccChHhHHHHHHHHHHHhCCcEEEEeCCC
Confidence 999999999999999999887421 111100 00011122334455567899999999999999999999999999
Q ss_pred HHHHHHHhhCC
Q 025657 239 AEDGSKLLSKE 249 (249)
Q Consensus 239 ~eDA~~A~~~~ 249 (249)
+|||++|.++|
T Consensus 354 ~e~A~~a~~aG 364 (511)
T 1kbi_A 354 TEDVIKAAEIG 364 (511)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHHHcC
Confidence 99999999987
No 7
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=99.95 E-value=2.4e-30 Score=241.12 Aligned_cols=203 Identities=11% Similarity=0.128 Sum_probs=155.0
Q ss_pred HHhCChhhhhhhccCccchHHHHHHHHhhcccceecc-ccCCCCCCccceeecCcccccceeeccccccccCCChhhHHH
Q 025657 18 KEKLPKMVYDYYASGAEDQWTLQENRNAFSRILFRPR-ILRDVSKIDMTTTVLGFNISMPIMIAPTAFQKMAHPEGECAT 96 (249)
Q Consensus 18 ~~~Lp~~~~~Y~~gGa~de~t~~~N~~af~~~~l~pr-~l~~v~~~d~st~llG~~~~~Pi~iaP~g~~~l~h~~gE~~~ 96 (249)
..+||+..|+||++|++++ ++|..+|++|+|+|| ++++++++|++|+|||.+++.||++|||+ ++.|+ ++
T Consensus 13 ~~~~~~~~~~~~~~~~~~~---~~~~~~fd~v~l~p~~~~~~~~~vdlst~l~g~~l~~Pii~Apm~--g~~~~----~~ 83 (393)
T 2qr6_A 13 ENLYFQGMRDHVEIGIGRE---ARRTYSLDDISVVSSRRTRSSKDVDTTWHIDAYKFDLPFMNHPSD--ALASP----EF 83 (393)
T ss_dssp -CHHHHHHHHEEEEETTEE---EECCCCGGGEEECCCSCCCCGGGCBCCEEETTEEESSSEEECCCT--TTCCH----HH
T ss_pred ccccccchHHHHhcccccc---cccCCChhhEEEccCCCCCChhHCCceeEEcccccCCCeEeCCCC--CcccH----HH
Confidence 3578999999999999999 469999999999998 99999999999999999999999999998 56666 59
Q ss_pred HHHHHhcCCcEEecC--------CCCCCHHHHHhcCC-------CceeEEEcccc-ChHHHHHHHHHHHHcCCcEEEEee
Q 025657 97 ARAASAAGTIMTLSS--------WATSSVEEVSSTGP-------GIRFFQLYVTK-HRNVDAQLVKRAERAGFKAIALTV 160 (249)
Q Consensus 97 AraA~~~gi~~~lss--------~ss~sleeia~~~~-------~~~wfQlY~~~-d~~~~~~li~rA~~aG~~alvvTv 160 (249)
|++++++|.++++|+ .++.++|+|++... .+.|||+|+.+ |++.+.++++|++++|+.+++-
T Consensus 84 a~a~a~~G~~gvl~~~~~~~~~~~~~~~~eeia~~~~~~d~~~g~~~~~q~~~~~~d~~~~~~~i~~~~~~g~~v~~~-- 161 (393)
T 2qr6_A 84 VIEMGKQGGLGVINAEGLWGRHADLDEAIAKVIAAYEEGDQAAATRTLQELHAAPLDTELLSERIAQVRDSGEIVAVR-- 161 (393)
T ss_dssp HHHHHHTTSBCEEETTSSTTTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHTTSCCEEE--
T ss_pred HHHHHHcCCcEEEEecceecccCCchhHHHHHHHHHHhcCCCccchhhhhcccccCCHHHHHHHHHHHhhcCCeEEEE--
Confidence 999999999999998 55678889986533 45799999766 9999999999999999988762
Q ss_pred cCCCCCCchhhhhccCCCCCccccccccccccCCCCCCCCchhhhHhhhhcCCCCCHHHHHHHHHhCCCCEEEEccCCHH
Q 025657 161 DTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKGVLTAE 240 (249)
Q Consensus 161 D~p~~g~Re~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tW~dl~wlr~~~~lPivlKGIl~~e 240 (249)
+.+++..+..+.+.-. +... + ... .+ . .......+..+|++|+|+++.|+.||++|||+++|
T Consensus 162 ---v~~~~~~e~a~~~~~a-gad~--i-~i~-~~--~--------~~~~~~~~~~~~~~i~~l~~~~~~pvi~ggi~t~e 223 (393)
T 2qr6_A 162 ---VSPQNVREIAPIVIKA-GADL--L-VIQ-GT--L--------ISAEHVNTGGEALNLKEFIGSLDVPVIAGGVNDYT 223 (393)
T ss_dssp ---ECTTTHHHHHHHHHHT-TCSE--E-EEE-CS--S--------CCSSCCCC-----CHHHHHHHCSSCEEEECCCSHH
T ss_pred ---eCCccHHHHHHHHHHC-CCCE--E-EEe-CC--c--------cccccCCCcccHHHHHHHHHhcCCCEEECCcCCHH
Confidence 2344555554433100 0000 0 000 00 0 00011234458999999999999999999999999
Q ss_pred HHHHHhhCC
Q 025657 241 DGSKLLSKE 249 (249)
Q Consensus 241 DA~~A~~~~ 249 (249)
||++|.++|
T Consensus 224 ~a~~~~~~G 232 (393)
T 2qr6_A 224 TALHMMRTG 232 (393)
T ss_dssp HHHHHHTTT
T ss_pred HHHHHHHcC
Confidence 999999987
No 8
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A*
Probab=99.91 E-value=2.5e-25 Score=203.10 Aligned_cols=186 Identities=22% Similarity=0.220 Sum_probs=116.3
Q ss_pred hhhhccCccchHHHHHHHHhhcccceeccccC--CCCCCccceeecCcccccceeeccccccccCCChhh---HHHHHHH
Q 025657 26 YDYYASGAEDQWTLQENRNAFSRILFRPRILR--DVSKIDMTTTVLGFNISMPIMIAPTAFQKMAHPEGE---CATARAA 100 (249)
Q Consensus 26 ~~Y~~gGa~de~t~~~N~~af~~~~l~pr~l~--~v~~~d~st~llG~~~~~Pi~iaP~g~~~l~h~~gE---~~~AraA 100 (249)
.+|+..+++++.|+++|+.+|++|+|+||+|+ +++++||+|+|||++++.||+||||++. |+.+| .++|++|
T Consensus 8 ~~hi~~~~~~~~~~~~~~~~f~~~~l~p~~l~~~~~~~~d~~~~i~g~~l~~P~~iapm~g~---~~~~~~~~~~la~~a 84 (332)
T 1vcf_A 8 RKHLEACLEGEVAYQKTTTGLEGFRLRYQALAGLALSEVDLTTPFLGKTLKAPFLIGAMTGG---EENGERINLALAEAA 84 (332)
T ss_dssp ---------------CCCCSGGGEEECCCTTCCCCGGGCCCCEEETTEEESSSEEECCCC------CCHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCcccccchhhhhhcEEehhhCCCCCCCCCCcceEECCcccCCceEEeccccC---CcchhHHHHHHHHHH
Confidence 57999999999999999999999999999999 7789999999999999999999998752 77776 7999999
Q ss_pred HhcCCcEEecCCCCCCHHHHHhcCCCceeEEEccccChHHHHHHHHHHHHcCCcEEEEeecCCCCCCchhhhhccCCCCC
Q 025657 101 SAAGTIMTLSSWATSSVEEVSSTGPGIRFFQLYVTKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPP 180 (249)
Q Consensus 101 ~~~gi~~~lss~ss~sleeia~~~~~~~wfQlY~~~d~~~~~~li~rA~~aG~~alvvTvD~p~~g~Re~d~r~~~~~p~ 180 (249)
++.|++|++|++++. +|+. ....|||+ ++++ +|.|+.|+|......++..+
T Consensus 85 ~~~G~~~~~~~~~~~-le~~----~~~~~~ql---~~~~--------------------~d~pv~~~~~~~q~~~~~~~- 135 (332)
T 1vcf_A 85 EALGVGMMLGSGRIL-LERP----EALRSFRV---RKVA--------------------PKALLIANLGLAQLRRYGRD- 135 (332)
T ss_dssp HHHTCEEEEEECHHH-HHCT----TTHHHHCC---TTTC--------------------SSSCEEEEEEGGGGGTCCHH-
T ss_pred HHcCCCEEeCCchhc-ccCC----CccceEEe---eccC--------------------CCceeecccChhhhhccChH-
Confidence 999999999999875 7653 23568886 3332 45555555553332222100
Q ss_pred ccccccccccccCCCCCCCCchhhhHhhhhcCCCCC----HHHHHHHHHhCCCCEEEEcc---CCHHHHHHHhhCC
Q 025657 181 HLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLN----WKDVKWLQTITSLPILVKGV---LTAEDGSKLLSKE 249 (249)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t----W~dl~wlr~~~~lPivlKGI---l~~eDA~~A~~~~ 249 (249)
. ....+......... .+.......+. ++..+ |+.++|+|+ |+.||++|+| +++|||+++.++|
T Consensus 136 ~-~~~a~~~~~~~a~~-i~~n~~~~~~~---~~~~~~~~~~~~i~~vr~-~~~Pv~vK~v~~g~~~e~a~~~~~~G 205 (332)
T 1vcf_A 136 D-LLRLVEMLEADALA-FHVNPLQEAVQ---RGDTDFRGLVERLAELLP-LPFPVMVKEVGHGLSREAALALRDLP 205 (332)
T ss_dssp H-HHHHHHHHTCSEEE-EECCHHHHHHT---TSCCCCTTHHHHHHHHCS-CSSCEEEECSSSCCCHHHHHHHTTSC
T ss_pred H-HHHHHhhcCCCcee-eccchHHHHhc---CCCccHHHHHHHHHHHHc-CCCCEEEEecCCCCCHHHHHHHHHcC
Confidence 0 00000000000000 00000011111 23333 899999999 9999999999 9999999999987
No 9
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=99.86 E-value=1.1e-21 Score=181.59 Aligned_cols=162 Identities=17% Similarity=0.263 Sum_probs=114.1
Q ss_pred HhhcccceeccccC--CCCCCccceeecCcccccceeeccccccccCCChhhHHHHHHHHhcCCcEEecCCCCCCHHHHH
Q 025657 44 NAFSRILFRPRILR--DVSKIDMTTTVLGFNISMPIMIAPTAFQKMAHPEGECATARAASAAGTIMTLSSWATSSVEEVS 121 (249)
Q Consensus 44 ~af~~~~l~pr~l~--~v~~~d~st~llG~~~~~Pi~iaP~g~~~l~h~~gE~~~AraA~~~gi~~~lss~ss~sleeia 121 (249)
..|++|+|+|+.|+ +++++||+|+|||+++++||+|+||++....+++.+.++|++|+++|++|++|+++.. +|+-.
T Consensus 54 ~~fd~i~l~~~~lP~~~~~~vd~st~i~g~~l~~Pi~iapMtgg~~~~~~in~~lA~~a~~~G~~~~vGs~~~~-le~~~ 132 (365)
T 3sr7_A 54 NSFDDIELIHHSLPDYDLAEIDLSTHFAGQDFDFPFYINAMTGGSQKGKEVNEKLAQVADTCGLLFVTGSYSTA-LKNPD 132 (365)
T ss_dssp CGGGGEEECCCSSCCSCGGGCCCCEEETTEEESSSEEEECC----CCCHHHHHHHHHHHHHHTCCEEC------------
T ss_pred CCcceEEEECCCCCcCCcccccceEEECCEEccCceEeccccCCCcchhHHHHHHHHHHHHcCCCeeccccccc-ccCcc
Confidence 58999999999995 6789999999999999999999999999988899999999999999999999998853 44422
Q ss_pred -------hcCC-CceeEEEccccChHHHHHHHHHHHHcCCcEEEEeecCCCCCCchhhhhccCCCCCccccccccccccC
Q 025657 122 -------STGP-GIRFFQLYVTKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIG 193 (249)
Q Consensus 122 -------~~~~-~~~wfQlY~~~d~~~~~~li~rA~~aG~~alvvTvD~p~~g~Re~d~r~~~~~p~~~~~~~~~~~~~~ 193 (249)
+..| .+.+-.+-.... .++..+.++.+|+.+|.++++... + ...|.
T Consensus 133 ~~~~~v~r~~P~~~~ianig~~~~---~e~~~~~ve~~~adal~ihln~~q------e----~~~p~------------- 186 (365)
T 3sr7_A 133 DTSYQVKKSRPHLLLATNIGLDKP---YQAGLQAVRDLQPLFLQVHINLMQ------E----LLMPE------------- 186 (365)
T ss_dssp ------------CCEEEEEETTSC---HHHHHHHHHHHCCSCEEEEECHHH------H----HTSSS-------------
T ss_pred ccceEehhhCCCCcEEEEeCCCCC---HHHHHHHHHhcCCCEEEEeccccc------c----ccCCC-------------
Confidence 1122 223333322112 234556667899999999999532 0 01110
Q ss_pred CCCCCCCchhhhHhhhhcCCCC-CH-HHHHHHHHhCCCCEEEEcc---CCHHHHHHHhhCC
Q 025657 194 KMDKTDDSGLASYVANQIDRSL-NW-KDVKWLQTITSLPILVKGV---LTAEDGSKLLSKE 249 (249)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~-tW-~dl~wlr~~~~lPivlKGI---l~~eDA~~A~~~~ 249 (249)
-++.+ +| +.|+|||+.|+.||++||| +++|||+++.++|
T Consensus 187 -----------------Gd~~~~~~~~~I~~l~~~~~~PVivK~vg~g~s~e~A~~l~~aG 230 (365)
T 3sr7_A 187 -----------------GEREFRSWKKHLSDYAKKLQLPFILKEVGFGMDVKTIQTAIDLG 230 (365)
T ss_dssp -----------------SCCCCHHHHHHHHHHHHHCCSCEEEEECSSCCCHHHHHHHHHHT
T ss_pred -----------------CCCcHHHHHHHHHHHHHhhCCCEEEEECCCCCCHHHHHHHHHcC
Confidence 02344 68 6799999999999999999 9999999999887
No 10
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=99.85 E-value=1.2e-21 Score=180.78 Aligned_cols=150 Identities=18% Similarity=0.158 Sum_probs=130.4
Q ss_pred HhhcccceeccccCCCC--CCc--cceeecCcccccceeeccccccccCCChhhHHHHHHHHhcCCcEEecCCCCCCHHH
Q 025657 44 NAFSRILFRPRILRDVS--KID--MTTTVLGFNISMPIMIAPTAFQKMAHPEGECATARAASAAGTIMTLSSWATSSVEE 119 (249)
Q Consensus 44 ~af~~~~l~pr~l~~v~--~~d--~st~llG~~~~~Pi~iaP~g~~~l~h~~gE~~~AraA~~~gi~~~lss~ss~slee 119 (249)
-+|++|.|+||++++++ ++| ++|+|+|.+++.||++||| |+.+|..+|+|++++|.++++|+. .|+|+
T Consensus 8 ~~fddv~l~P~~~~~~~r~~vd~~~~t~l~g~~l~~Pii~ApM------~~vte~~lA~A~a~~Gg~gvi~~~--~s~ee 79 (361)
T 3r2g_A 8 ITFDDVLLVPSYNHHESRRVVETTSTDRLGKLTLNLPVISANM------DTITESNMANFMHSKGAMGALHRF--MTIEE 79 (361)
T ss_dssp CCGGGEEECCCCCCSCTTCCCCCCEECTTSSCEESSCEEECCS------TTTCSHHHHHHHHHTTCEEBCCSC--SCHHH
T ss_pred cccceEEEECCCCCCCccccccceeeEEECCEEcCCCEEECCC------CCchHHHHHHHHHHcCCCEEEeCC--CCHHH
Confidence 37999999999999987 765 5559999999999999996 688999999999999999999964 89999
Q ss_pred HHhcCCCceeEEEccccChHHHHHHHHHHHHcCCcEEEEeecCCCCCCchhhhhccCCCCCccccccccccccCCCCCCC
Q 025657 120 VSSTGPGIRFFQLYVTKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTD 199 (249)
Q Consensus 120 ia~~~~~~~wfQlY~~~d~~~~~~li~rA~~aG~~alvvTvD~p~~g~Re~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~ 199 (249)
+++......|||.|...+++.+.++++++.++|++ +|++|++. |+ +
T Consensus 80 ~~~~i~~~~~~~~~~~g~~~~~~e~~~~a~~aGvd--vI~id~a~-G~-----------~-------------------- 125 (361)
T 3r2g_A 80 NIQEFKKCKGPVFVSVGCTENELQRAEALRDAGAD--FFCVDVAH-AH-----------A-------------------- 125 (361)
T ss_dssp HHHHHHTCCSCCBEEECSSHHHHHHHHHHHHTTCC--EEEEECSC-CS-----------S--------------------
T ss_pred HHHHHhhcceEEEEEcCCCHHHHHHHHHHHHcCCC--EEEEeCCC-CC-----------c--------------------
Confidence 98765556799999999999999999999999999 67888755 21 0
Q ss_pred CchhhhHhhhhcCCCCCHHHHHHHHHhC-CCCEEEEccCCHHHHHHHhhCC
Q 025657 200 DSGLASYVANQIDRSLNWKDVKWLQTIT-SLPILVKGVLTAEDGSKLLSKE 249 (249)
Q Consensus 200 ~~~~~~~~~~~~~~~~tW~dl~wlr~~~-~lPivlKGIl~~eDA~~A~~~~ 249 (249)
..-|+.|+|||+.| +.||++|+|.++|||+.|+++|
T Consensus 126 --------------~~~~e~I~~ir~~~~~~~Vi~G~V~T~e~A~~a~~aG 162 (361)
T 3r2g_A 126 --------------KYVGKTLKSLRQLLGSRCIMAGNVATYAGADYLASCG 162 (361)
T ss_dssp --------------HHHHHHHHHHHHHHTTCEEEEEEECSHHHHHHHHHTT
T ss_pred --------------HhHHHHHHHHHHhcCCCeEEEcCcCCHHHHHHHHHcC
Confidence 01288999999998 6899999999999999999987
No 11
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=99.85 E-value=4.3e-21 Score=175.96 Aligned_cols=164 Identities=23% Similarity=0.308 Sum_probs=125.0
Q ss_pred HHHhhcccceeccccC--CCCCCccceeecCcccccceeeccc-cccccCCChhhHHHHHHHHhcCCcEEecCCCCCCHH
Q 025657 42 NRNAFSRILFRPRILR--DVSKIDMTTTVLGFNISMPIMIAPT-AFQKMAHPEGECATARAASAAGTIMTLSSWATSSVE 118 (249)
Q Consensus 42 N~~af~~~~l~pr~l~--~v~~~d~st~llG~~~~~Pi~iaP~-g~~~l~h~~gE~~~AraA~~~gi~~~lss~ss~sle 118 (249)
+..+|++|+|+||+|+ +++++|++|+|||++++.||++||| |+++..++++|.+++++|++.|++|++|++++. +|
T Consensus 21 ~~~~f~~~~l~p~~l~~~~~~~~d~~~~i~g~~~~~P~~iApm~g~~~~~~~~~~~~~a~aa~~~G~~~~~~~~~~~-l~ 99 (349)
T 1p0k_A 21 RETGLDDITFVHVSLPDLALEQVDISTKIGELSSSSPIFINAMTGGGGKLTYEINKSLARAASQAGIPLAVGSQMSA-LK 99 (349)
T ss_dssp CCCSGGGEEECCCSCCCCCGGGCBCCEEETTEEESCSEEEECCCCSCHHHHHHHHHHHHHHHHHHTCCEECCCCTTT-TT
T ss_pred ccCccceEEEEccccCCCCcccCCceeEECCcccCCceEEcCccccchhhhhHHHHHHHHHHHHcCCcEEeccchhc-cc
Confidence 3568999999999999 7789999999999999999999997 555234577799999999999999999998875 55
Q ss_pred HH---------HhcCC-CceeEEEccccChHHHHHHHHHHHHcCCcEEEEeecCCCCCCchhhhhccCCCCCcccccccc
Q 025657 119 EV---------SSTGP-GIRFFQLYVTKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYE 188 (249)
Q Consensus 119 ei---------a~~~~-~~~wfQlY~~~d~~~~~~li~rA~~aG~~alvvTvD~p~~g~Re~d~r~~~~~p~~~~~~~~~ 188 (249)
++ ....+ .+.+.|+....+.+. +.+.++.+|+.+|.+++++|.. +..|.
T Consensus 100 ~~~~~~~~~~~~~~~~~~pv~~~i~~~~~~~~---~~~~~~~~gad~i~i~~~~~~~----------~~~~~-------- 158 (349)
T 1p0k_A 100 DPSERLSYEIVRKENPNGLIFANLGSEATAAQ---AKEAVEMIGANALQIHLNVIQE----------IVMPE-------- 158 (349)
T ss_dssp CHHHHHHHHHHHHHCSSSCEEEEEETTCCHHH---HHHHHHHTTCSEEEEEECTTTT----------C------------
T ss_pred CcccccceehhhhhCCCceeEEeecCCCCHHH---HHHHHHhcCCCeEEecccchhh----------hcCCC--------
Confidence 43 22233 467788864334433 3344567899999999987641 10010
Q ss_pred ccccCCCCCCCCchhhhHhhhhcCCCC--CHHHHHHHHHhCCCCEEEEcc---CCHHHHHHHhhCC
Q 025657 189 GLYIGKMDKTDDSGLASYVANQIDRSL--NWKDVKWLQTITSLPILVKGV---LTAEDGSKLLSKE 249 (249)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--tW~dl~wlr~~~~lPivlKGI---l~~eDA~~A~~~~ 249 (249)
.++.+ .|+.|+|+|+.++.||++||+ +++++|+.|.++|
T Consensus 159 ----------------------~~~~~~~~~~~i~~vr~~~~~Pv~vK~~~~~~~~~~a~~a~~~G 202 (349)
T 1p0k_A 159 ----------------------GDRSFSGALKRIEQICSRVSVPVIVKEVGFGMSKASAGKLYEAG 202 (349)
T ss_dssp --------------------------CTTHHHHHHHHHHHCSSCEEEEEESSCCCHHHHHHHHHHT
T ss_pred ----------------------CCcchHHHHHHHHHHHHHcCCCEEEEecCCCCCHHHHHHHHHcC
Confidence 02334 247899999999999999998 9999999999887
No 12
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=99.76 E-value=2.3e-19 Score=164.09 Aligned_cols=161 Identities=15% Similarity=0.172 Sum_probs=114.2
Q ss_pred hHHHHHHHHhhcccceeccc--cCCCCCCccceeecCcccccceeeccccccccCCChhhHHHHHHHHhcCCcEEecCCC
Q 025657 36 QWTLQENRNAFSRILFRPRI--LRDVSKIDMTTTVLGFNISMPIMIAPTAFQKMAHPEGECATARAASAAGTIMTLSSWA 113 (249)
Q Consensus 36 e~t~~~N~~af~~~~l~pr~--l~~v~~~d~st~llG~~~~~Pi~iaP~g~~~l~h~~gE~~~AraA~~~gi~~~lss~s 113 (249)
.+-..+|..+|++|+|+||+ +++++++|++|+|+|.+++.||++|||++.
T Consensus 6 ~~~~~~~~~~fd~v~l~p~~~~~~~~~~vdl~t~i~g~~l~~Pi~~a~mag~---------------------------- 57 (336)
T 1ypf_A 6 HHHHMGNVFDYEDIQLIPAKCIVNSRSECDTTVTLGKHKFKLPVVPANMQTI---------------------------- 57 (336)
T ss_dssp ------CCCCGGGEEECCCCCCCSSGGGCBCCEEETTEEESSSEEECSSTTT----------------------------
T ss_pred ccccccccCCcceEEEecccCCCCCcccCcceEEECCEEecCcEEECCCCCC----------------------------
Confidence 34456899999999999999 678999999999999999999999886643
Q ss_pred CCCHHHHHhcCCCceeEEEccccChHHHHHHHHHHHHcCCcEEEEeecCCCCCCchhhhhccCCCCC-cccccccccccc
Q 025657 114 TSSVEEVSSTGPGIRFFQLYVTKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPP-HLTLKNYEGLYI 192 (249)
Q Consensus 114 s~sleeia~~~~~~~wfQlY~~~d~~~~~~li~rA~~aG~~alvvTvD~p~~g~Re~d~r~~~~~p~-~~~~~~~~~~~~ 192 (249)
|.++++++.....|||+|...+++.+.++++++++.|+ .+++| .|.++++++....+.. +..+. -+.+
T Consensus 58 --s~~~la~a~~~~gg~g~~~~~~~~~~~~~i~~~~~~g~---~v~v~---~g~~~~~~~~a~~~~~~g~~~~---~i~i 126 (336)
T 1ypf_A 58 --IDERIATYLAENNYFYIMHRFQPEKRISFIRDMQSRGL---IASIS---VGVKEDEYEFVQQLAAEHLTPE---YITI 126 (336)
T ss_dssp --CCHHHHHHHHHTTCCCCCCCSSGGGHHHHHHHHHHTTC---CCEEE---ECCSHHHHHHHHHHHHTTCCCS---EEEE
T ss_pred --ChHHHHHHHHhCCCEEEecCCCCHHHHHHHHHHHhcCC---eEEEe---CCCCHHHHHHHHHHHhcCCCCC---EEEE
Confidence 23555432122358999999999989999999999886 56888 4777776654211100 00000 0000
Q ss_pred CCCCCCCCchhhhHhhhhcCCCCCHHHHHHHHHhCCCCEEEEc-cCCHHHHHHHhhCC
Q 025657 193 GKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKG-VLTAEDGSKLLSKE 249 (249)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~tW~dl~wlr~~~~lPivlKG-Il~~eDA~~A~~~~ 249 (249)
+.. .-++...|+.|+|||+.|++|+|+|| |+++|||++|+++|
T Consensus 127 -~~~-------------~G~~~~~~~~i~~lr~~~~~~~vi~G~v~s~e~A~~a~~aG 170 (336)
T 1ypf_A 127 -DIA-------------HGHSNAVINMIQHIKKHLPESFVIAGNVGTPEAVRELENAG 170 (336)
T ss_dssp -ECS-------------SCCSHHHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHHT
T ss_pred -ECC-------------CCCcHHHHHHHHHHHHhCCCCEEEECCcCCHHHHHHHHHcC
Confidence 000 00345679999999999999999999 99999999999987
No 13
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=99.75 E-value=2.3e-18 Score=159.56 Aligned_cols=166 Identities=17% Similarity=0.174 Sum_probs=116.0
Q ss_pred HhhcccceeccccC--CCCCCccceeecCcccccceeeccccccccCCChhhHHHHHHHHhcCCcEEecCCCCC------
Q 025657 44 NAFSRILFRPRILR--DVSKIDMTTTVLGFNISMPIMIAPTAFQKMAHPEGECATARAASAAGTIMTLSSWATS------ 115 (249)
Q Consensus 44 ~af~~~~l~pr~l~--~v~~~d~st~llG~~~~~Pi~iaP~g~~~l~h~~gE~~~AraA~~~gi~~~lss~ss~------ 115 (249)
..|++|+|+|+.|+ +++++||+|+|||++++.||+++||++......+-...+|++|++.|++|++|+++..
T Consensus 27 ~~~~~v~l~~~~lp~~~~~~vd~st~~~g~~l~~Pv~ia~MtGgt~~~~~in~~la~~a~~~G~~~~vGs~~~~l~~~~~ 106 (368)
T 3vkj_A 27 TFLNDVILVHQGFPGISFSEINTKTKFFRKEISVPVMVTGMTGGRNELGRINKIIAEVAEKFGIPMGVGSQRVAIEKAEA 106 (368)
T ss_dssp CSGGGEEECCCSSCBSBGGGCBCCEEETTEEESSSEEECCCCCSSHHHHHHHHHHHHHHHHHTCCEECCCCHHHHHCGGG
T ss_pred CCcceEEEEcCCCCccCcccccceeEECCEeccCCeEEecCCCCCchhhHHHHHHHHHHHHhCCCeeeecchhccCCHHH
Confidence 46999999999999 7789999999999999999999999765322223345899999999999999999421
Q ss_pred --CHHHHHhcCC-CceeEEEccccChH-HHHHHHHH-HHHcCCcEEEEeecCCCCCCchhhhhccCCCCCcccccccccc
Q 025657 116 --SVEEVSSTGP-GIRFFQLYVTKHRN-VDAQLVKR-AERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGL 190 (249)
Q Consensus 116 --sleeia~~~~-~~~wfQlY~~~d~~-~~~~li~r-A~~aG~~alvvTvD~p~~g~Re~d~r~~~~~p~~~~~~~~~~~ 190 (249)
|.+-+.+.+| .+.+-.+....-.+ ...+.+++ ++.+++.|+.|.+... ..-+ .|.
T Consensus 107 ~~s~~~vr~~ap~~~~~anlg~~ql~~~~~~~~~~~av~~~~a~al~Ihln~~---------~~~~-~p~---------- 166 (368)
T 3vkj_A 107 RESFAIVRKVAPTIPIIANLGMPQLVKGYGLKEFQDAIQMIEADAIAVHLNPA---------QEVF-QPE---------- 166 (368)
T ss_dssp SHHHHHHHHHCSSSCEEEEEEGGGGGTTCCHHHHHHHHHHTTCSEEEEECCHH---------HHHH-SSS----------
T ss_pred HhhHHHHHHhCcCcceecCcCeeecCCCCCHHHHHHHHHHhcCCCeEEEecch---------hhhh-CCC----------
Confidence 2222444455 34555555421111 11133333 4456888988776521 0000 010
Q ss_pred ccCCCCCCCCchhhhHhhhhcCCCC---CHHHHHHHHHhCCCCEEEEcc---CCHHHHHHHhhCC
Q 025657 191 YIGKMDKTDDSGLASYVANQIDRSL---NWKDVKWLQTITSLPILVKGV---LTAEDGSKLLSKE 249 (249)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~---tW~dl~wlr~~~~lPivlKGI---l~~eDA~~A~~~~ 249 (249)
-+..+ .|+.|+|+++.++.||++||| ++++||+++.++|
T Consensus 167 --------------------g~~~~~~~~~~~i~~i~~~~~vPVivK~vG~g~s~~~A~~l~~aG 211 (368)
T 3vkj_A 167 --------------------GEPEYQIYALEKLRDISKELSVPIIVKESGNGISMETAKLLYSYG 211 (368)
T ss_dssp --------------------CCCBCBTHHHHHHHHHHTTCSSCEEEECSSSCCCHHHHHHHHHTT
T ss_pred --------------------CCchhhHHHHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHhCC
Confidence 01122 368999999999999999999 9999999999987
No 14
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=99.67 E-value=1.2e-16 Score=147.06 Aligned_cols=155 Identities=17% Similarity=0.150 Sum_probs=110.6
Q ss_pred HHHHHHHhhcccceeccccC-CC-CCCccceeec-----CcccccceeeccccccccCCChhhHHHHHHHHhcCCcEEec
Q 025657 38 TLQENRNAFSRILFRPRILR-DV-SKIDMTTTVL-----GFNISMPIMIAPTAFQKMAHPEGECATARAASAAGTIMTLS 110 (249)
Q Consensus 38 t~~~N~~af~~~~l~pr~l~-~v-~~~d~st~ll-----G~~~~~Pi~iaP~g~~~l~h~~gE~~~AraA~~~gi~~~ls 110 (249)
-+++|..+|++|.|+|+++. ++ +++||+|+|+ |.+++.||++|||+. .+|.++|+|++++|...+++
T Consensus 14 ~~~~~~~~fddv~l~p~~~~~~~~~~vdl~t~l~~~~~~~~~l~~PIi~ApM~~------~~~~~lA~Ava~~Gglg~i~ 87 (351)
T 2c6q_A 14 LVPRGSLDFKDVLLRPKRSTLKSRSEVDLTRSFSFRNSKQTYSGVPIIAANMDT------VGTFEMAKVLCKFSLFTAVH 87 (351)
T ss_dssp -----CCCGGGEEECCCCBCCCCGGGCBCCEEEECTTTCCEEEECCEEECSSTT------TSCHHHHHHHHHTTCEEECC
T ss_pred ccccCCCCcceEEEECCCCCCCccccceeEEEeccccCcCccccCCEEECCCCC------CCcHHHHHHHHHCCCEEEEc
Confidence 45789999999999999987 68 7999999999 999999999999874 45789999999999888887
Q ss_pred CCCCCCHHHHHhcCC-CceeEE-Ecc--ccChHHHHHHHHHHHHc--CCcEEEEeecCCCCCCchhhhhccCCCCCcccc
Q 025657 111 SWATSSVEEVSSTGP-GIRFFQ-LYV--TKHRNVDAQLVKRAERA--GFKAIALTVDTPRLGRREADIKNRFVLPPHLTL 184 (249)
Q Consensus 111 s~ss~sleeia~~~~-~~~wfQ-lY~--~~d~~~~~~li~rA~~a--G~~alvvTvD~p~~g~Re~d~r~~~~~p~~~~~ 184 (249)
. +.++|++.+... .+.+++ +.. ..+.+. .+.++...++ |++++.+++. . |
T Consensus 88 ~--~~s~e~~~~~i~~~p~~l~~v~~~~g~~~~~-~~~~~~l~~~~~g~~~i~i~~~--~-g------------------ 143 (351)
T 2c6q_A 88 K--HYSLVQWQEFAGQNPDCLEHLAASSGTGSSD-FEQLEQILEAIPQVKYICLDVA--N-G------------------ 143 (351)
T ss_dssp T--TCCHHHHHHHHHHCGGGCTTEEEEECSSHHH-HHHHHHHHHHCTTCCEEEEECS--C-T------------------
T ss_pred C--CCCHHHHHHHHhhCchhhheeEeecCCChHH-HHHHHHHHhccCCCCEEEEEec--C-C------------------
Confidence 5 678998865321 122221 111 111221 2333444444 7877655432 1 1
Q ss_pred ccccccccCCCCCCCCchhhhHhhhhcCCCCCHHHHHHHHHhC-CCCEEEEccCCHHHHHHHhhCC
Q 025657 185 KNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTIT-SLPILVKGVLTAEDGSKLLSKE 249 (249)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tW~dl~wlr~~~-~lPivlKGIl~~eDA~~A~~~~ 249 (249)
++...|+.|+|||+.| ++||++|+|+++|||++|+++|
T Consensus 144 ---------------------------~~~~~~~~i~~lr~~~~~~~vi~g~v~t~e~A~~a~~aG 182 (351)
T 2c6q_A 144 ---------------------------YSEHFVEFVKDVRKRFPQHTIMAGNVVTGEMVEELILSG 182 (351)
T ss_dssp ---------------------------TBHHHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHTT
T ss_pred ---------------------------CcHHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHhC
Confidence 0112589999999999 8999999999999999999987
No 15
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=99.63 E-value=4.3e-16 Score=145.46 Aligned_cols=194 Identities=15% Similarity=0.191 Sum_probs=105.9
Q ss_pred HhhcccceeccccC-CCCCCccceeec-CcccccceeeccccccccCCChhhHHHHHHHHhcCCcEEecCCCCCCHHHHH
Q 025657 44 NAFSRILFRPRILR-DVSKIDMTTTVL-GFNISMPIMIAPTAFQKMAHPEGECATARAASAAGTIMTLSSWATSSVEEVS 121 (249)
Q Consensus 44 ~af~~~~l~pr~l~-~v~~~d~st~ll-G~~~~~Pi~iaP~g~~~l~h~~gE~~~AraA~~~gi~~~lss~ss~sleeia 121 (249)
.+|++|.|+|+++. +++++|++|+|+ |.+++.||++|||++ ++++|++.| +.++|...+++ ++.++|++.
T Consensus 10 ~~fd~v~l~p~~~~~~~~~vdlst~l~~g~~l~~Pii~Apm~~----~~~~ela~a--~a~aGglg~i~--~~~s~e~~~ 81 (404)
T 1eep_A 10 LTFDDVSLIPRKSSVLPSEVSLKTQLTKNISLNIPFLSSAMDT----VTESQMAIA--IAKEGGIGIIH--KNMSIEAQR 81 (404)
T ss_dssp CCGGGEEECCCCCCSCGGGCCCCEESSSSCEESSSEEECCCTT----TCSHHHHHH--HHHHTSEEEEC--SSSCHHHHH
T ss_pred CCcccEEEccCCCCcCccccccceeccCCcccCCCEEeCCCCC----CCCHHHHHH--HHHCCCEEEEC--CCCCHHHHH
Confidence 57999999999998 889999999999 999999999999986 577777666 55556655665 578999997
Q ss_pred hcCCCceeEE----EccccChHHHH-HHHHHHHH----cCCcEEEEeecCCCCCCchhhhhccCCCCCcccccccccccc
Q 025657 122 STGPGIRFFQ----LYVTKHRNVDA-QLVKRAER----AGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYI 192 (249)
Q Consensus 122 ~~~~~~~wfQ----lY~~~d~~~~~-~li~rA~~----aG~~alvvTvD~p~~g~Re~d~r~~~~~p~~~~~~~~~~~~~ 192 (249)
+..+..+|+| +|..+|..... .++-.... .+++.+..+.|.|.. .|+.+-+..+...............
T Consensus 82 ~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~p~~-~~~~~~~~~~~~~i~~~~~~~~~a~- 159 (404)
T 1eep_A 82 KEIEKVKTYKFQKTINTNGDTNEQKPEIFTAKQHLEKSDAYKNAEHKEDFPNA-CKDLNNKLRVGAAVSIDIDTIERVE- 159 (404)
T ss_dssp HHHHHHHTCC--------------------------------------CCTTC-CBCTTSCBCCEEEECSCTTHHHHHH-
T ss_pred HHHHHHHhhccCCCceeccccccccccccccCCCCCHHHHHHHHHHhhhcchh-hhhcccCceEEEEeCCChhHHHHHH-
Confidence 6543334554 66555543221 22211111 134556666677763 3443322222100000000000000
Q ss_pred CCCCCCCCchhhhHhhhhcCCCCCHHHHHHHHHhC-CCCEEEEccCCHHHHHHHhhCC
Q 025657 193 GKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTIT-SLPILVKGVLTAEDGSKLLSKE 249 (249)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~tW~dl~wlr~~~-~lPivlKGIl~~eDA~~A~~~~ 249 (249)
.....+...+ ......-++...|+.|+|+|+.+ +.||++++|.++++|++|.++|
T Consensus 160 -~~~~~G~d~i-~i~~~~g~~~~~~e~i~~ir~~~~~~pviv~~v~~~~~a~~a~~~G 215 (404)
T 1eep_A 160 -ELVKAHVDIL-VIDSAHGHSTRIIELIKKIKTKYPNLDLIAGNIVTKEAALDLISVG 215 (404)
T ss_dssp -HHHHTTCSEE-EECCSCCSSHHHHHHHHHHHHHCTTCEEEEEEECSHHHHHHHHTTT
T ss_pred -HHHHCCCCEE-EEeCCCCChHHHHHHHHHHHHHCCCCeEEEcCCCcHHHHHHHHhcC
Confidence 0000000000 00000113455799999999999 7899999999999999999987
No 16
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=99.00 E-value=1e-09 Score=113.08 Aligned_cols=159 Identities=20% Similarity=0.270 Sum_probs=113.9
Q ss_pred eeccccCCCCCCccceeecCcccccceeeccccccccCCChhhHHHHHHHHhcCCcEEe-cCCC-------CC-------
Q 025657 51 FRPRILRDVSKIDMTTTVLGFNISMPIMIAPTAFQKMAHPEGECATARAASAAGTIMTL-SSWA-------TS------- 115 (249)
Q Consensus 51 l~pr~l~~v~~~d~st~llG~~~~~Pi~iaP~g~~~l~h~~gE~~~AraA~~~gi~~~l-ss~s-------s~------- 115 (249)
-.|..-..++.+|++++++|.+++.||++||+++. .+..+++++.+.|..+++ .|.+ +.
T Consensus 520 ~~p~~~~ev~~v~ls~~~~G~~~~nPv~lAa~~~~------~~~~~~~~~~~~g~G~vv~~t~~~~~~~~gn~~pr~~~~ 593 (1025)
T 1gte_A 520 ELPLFYTPVDLVDISVEMAGLKFINPFGLASAAPT------TSSSMIRRAFEAGWGFALTKTFSLDKDIVTNVSPRIVRG 593 (1025)
T ss_dssp CBCCCCCGGGGCCCCEEETTEEESSSEEECSSGGG------SSHHHHHHHHHHTCSEEECCCBCCGGGCCCCCSSCEEEC
T ss_pred CccccccccccccceeeeccccccCcccccCCCCC------CCHHHHHHHHHCCcCeEEeceecccccccCCCCccEEec
Confidence 34444446678999999999999999999997753 344567778888888886 2111 11
Q ss_pred -----------------------C-------HHHHHhcCC-CceeEEEccccChHHHHHHHHHHHHcCCcEEEEeecCCC
Q 025657 116 -----------------------S-------VEEVSSTGP-GIRFFQLYVTKHRNVDAQLVKRAERAGFKAIALTVDTPR 164 (249)
Q Consensus 116 -----------------------s-------leeia~~~~-~~~wfQlY~~~d~~~~~~li~rA~~aG~~alvvTvD~p~ 164 (249)
+ ++++.+..+ .+.|+|++...+.+...+.+++++++|+.+|.|++.+|.
T Consensus 594 ~~~g~~~~~~~~~~~n~e~~~~~~~~~~~~~i~~~~~~~~~~~~i~~i~~g~~~~~~~~~a~~~~~~g~d~iein~~~P~ 673 (1025)
T 1gte_A 594 TTSGPMYGPGQSSFLNIELISEKTAAYWCQSVTELKADFPDNIVIASIMCSYNKNDWMELSRKAEASGADALELNLSCPH 673 (1025)
T ss_dssp CTTCSCCSSCCSCEEECCCSCSSCHHHHHHHHHHHHHHCTTSEEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCCBC
T ss_pred cccccccCCchhheeeeccccchhHHHHHHHHHHHHhcCCCCCeEEEecCCCCHHHHHHHHHHHHhcCCCEEEEECCCCC
Confidence 1 234444454 678999988889999999999999999999999999886
Q ss_pred CCCchhhhhccCCCCCccccccccccccCCCCCCCCchhhhHhhhhcCCCCCHHHHHHHHHhCCCCEEEEccCCHHH---
Q 025657 165 LGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKGVLTAED--- 241 (249)
Q Consensus 165 ~g~Re~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tW~dl~wlr~~~~lPivlKGIl~~eD--- 241 (249)
. .+.++. | .. ...++.+.|+.++|+|+.++.||++|...+.+|
T Consensus 674 ~-~~~~~~--G--------------~~-----------------~~~~~~~~~~iv~~v~~~~~~Pv~vK~~~~~~~~~~ 719 (1025)
T 1gte_A 674 G-MGERGM--G--------------LA-----------------CGQDPELVRNICRWVRQAVQIPFFAKLTPNVTDIVS 719 (1025)
T ss_dssp C-CC---------------------SB-----------------GGGCHHHHHHHHHHHHHHCSSCEEEEECSCSSCHHH
T ss_pred C-CCCCCc--c--------------cc-----------------cccCHHHHHHHHHHHHHhhCCceEEEeCCChHHHHH
Confidence 3 211110 0 00 001345678899999999999999999887665
Q ss_pred -HHHHhhCC
Q 025657 242 -GSKLLSKE 249 (249)
Q Consensus 242 -A~~A~~~~ 249 (249)
|+.+.++|
T Consensus 720 ~a~~~~~~G 728 (1025)
T 1gte_A 720 IARAAKEGG 728 (1025)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHcC
Confidence 77777665
No 17
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=98.85 E-value=3.6e-08 Score=90.85 Aligned_cols=142 Identities=18% Similarity=0.240 Sum_probs=100.5
Q ss_pred hhcccceeccccCCC--CCCccceeec-CcccccceeeccccccccCCChhhHHHHHH-HHhcCCcEEecCCCCCCHHHH
Q 025657 45 AFSRILFRPRILRDV--SKIDMTTTVL-GFNISMPIMIAPTAFQKMAHPEGECATARA-ASAAGTIMTLSSWATSSVEEV 120 (249)
Q Consensus 45 af~~~~l~pr~l~~v--~~~d~st~ll-G~~~~~Pi~iaP~g~~~l~h~~gE~~~Ara-A~~~gi~~~lss~ss~sleei 120 (249)
.|+++.|+|. +.++ +++|++|+|. +..+..||+.+||... .+..+|.+ |.+-|+.++-. +.+.|++
T Consensus 14 ~fddv~l~p~-~~~~~~~~vdl~t~l~~~~~l~~Pii~apM~~v------t~~~lA~avA~~GGlgii~~---~~s~e~~ 83 (361)
T 3khj_A 14 TFEDILLVPN-YSEVLPREVSLETKLTKNVSLKIPLISSAMDTV------TEHLMAVGMARLGGIGIIHK---NMDMESQ 83 (361)
T ss_dssp CGGGEEECCC-CBCCCGGGCCCCEESSSSCEESSSEEECSSTTT------CSHHHHHHHHHTTCEEEECS---SSCHHHH
T ss_pred CcceEEEECC-CCCCCHHHccCceecccccccCCCEEeecCCCC------CcHHHHHHHHHcCCCeEEec---CCCHHHH
Confidence 5999999998 6766 5799999998 7899999999998754 24467765 44556656543 4566655
Q ss_pred Hh----c--CC-CceeEEEccccChHHHHHHHHHHHHcCCcEEEEeecCCCCCCchhhhhccCCCCCccccccccccccC
Q 025657 121 SS----T--GP-GIRFFQLYVTKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIG 193 (249)
Q Consensus 121 a~----~--~~-~~~wfQlY~~~d~~~~~~li~rA~~aG~~alvvTvD~p~~g~Re~d~r~~~~~p~~~~~~~~~~~~~~ 193 (249)
.+ . .+ .+.-..+.... .+.++.+.++|+..|+ +|+.. |. |
T Consensus 84 ~~~I~~vk~~~~~pvga~ig~~~-----~e~a~~l~eaGad~I~--ld~a~-G~-----------~-------------- 130 (361)
T 3khj_A 84 VNEVLKVKNSGGLRVGAAIGVNE-----IERAKLLVEAGVDVIV--LDSAH-GH-----------S-------------- 130 (361)
T ss_dssp HHHHHHHHHTTCCCCEEEECTTC-----HHHHHHHHHTTCSEEE--ECCSC-CS-----------B--------------
T ss_pred HHHHHHHHhccCceEEEEeCCCH-----HHHHHHHHHcCcCeEE--EeCCC-CC-----------c--------------
Confidence 32 1 12 23446665432 5677888899999765 45432 10 0
Q ss_pred CCCCCCCchhhhHhhhhcCCCCCHHHHHHHHHhCCCCEEEEccCCHHHHHHHhhCC
Q 025657 194 KMDKTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKGVLTAEDGSKLLSKE 249 (249)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~tW~dl~wlr~~~~lPivlKGIl~~eDA~~A~~~~ 249 (249)
..-.+.++++|+.++.||++++|.++|+|+.+.++|
T Consensus 131 --------------------~~~~~~i~~i~~~~~~~Vivg~v~t~e~A~~l~~aG 166 (361)
T 3khj_A 131 --------------------LNIIRTLKEIKSKMNIDVIVGNVVTEEATKELIENG 166 (361)
T ss_dssp --------------------HHHHHHHHHHHHHCCCEEEEEEECSHHHHHHHHHTT
T ss_pred --------------------HHHHHHHHHHHHhcCCcEEEccCCCHHHHHHHHHcC
Confidence 001256889999999999999999999999999987
No 18
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=98.72 E-value=1.2e-08 Score=92.52 Aligned_cols=168 Identities=17% Similarity=0.190 Sum_probs=97.9
Q ss_pred CCccceeecCcccccceeeccccccccCCChhhHHHHHHHHhcCCcEEecCCCCCCHHHHHhcCCCceeEEEc----cc-
Q 025657 61 KIDMTTTVLGFNISMPIMIAPTAFQKMAHPEGECATARAASAAGTIMTLSSWATSSVEEVSSTGPGIRFFQLY----VT- 135 (249)
Q Consensus 61 ~~d~st~llG~~~~~Pi~iaP~g~~~l~h~~gE~~~AraA~~~gi~~~lss~ss~sleeia~~~~~~~wfQlY----~~- 135 (249)
.+|++++|+|.+++.||++|+ | ++.++| .++++++.|+.++++ .+.+++... ..+.++|||+| +.
T Consensus 42 ~~~l~~~i~g~~l~npi~~aa-g----~~~~~~--~~~~~a~~G~g~i~~--~~~~~~~~~-g~~~pr~~~~~~d~~~in 111 (336)
T 1f76_A 42 VPAKPVNCMGLTFKNPLGLAA-G----LDKDGE--CIDALGAMGFGSIEI--GTVTPRPQP-GNDKPRLFRLVDAEGLIN 111 (336)
T ss_dssp CCCCCEEETTEEESSSEEECT-T----SSTTCC--CHHHHHHTTCSEEEE--EEECSSCBC-CSCSCCEEEETTTTEEEE
T ss_pred CCCCCeEECCEEcCCCcEeCc-c----cCCcHH--HHHHHHHcCccEEEe--CCCCCCCCC-CCCCcceeeccccceeee
Confidence 489999999999999999995 3 256666 777888999998653 234444332 23567899998 11
Q ss_pred ----cChHHHHHHHHHHHHcCCc-EEEEee----cCCCCCCchhhhhccCCCCCccccccccccccCCCCCCCCchhhhH
Q 025657 136 ----KHRNVDAQLVKRAERAGFK-AIALTV----DTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASY 206 (249)
Q Consensus 136 ----~d~~~~~~li~rA~~aG~~-alvvTv----D~p~~g~Re~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (249)
.+.+ ...+++++++++++ .+++++ |++.. ....|.+..+..- . ..+..+.. |.......+. .
T Consensus 112 ~~g~~~~g-~~~~~~~~~~~~~~~~~~v~i~~~~~~~i~-~~~~~~~~aa~~~---~-~g~d~iei-n~~sP~~~g~-~- 182 (336)
T 1f76_A 112 RMGFNNLG-VDNLVENVKKAHYDGVLGINIGKNKDTPVE-QGKDDYLICMEKI---Y-AYAGYIAI-NISSPNTPGL-R- 182 (336)
T ss_dssp CCCCCBCC-HHHHHHHHHHCCCCSEEEEEECCCTTSCGG-GTHHHHHHHHHHH---G-GGCSEEEE-ECCCSSSTTG-G-
T ss_pred cCCCCCcC-HHHHHHHHHhcccCCcEEEEecCCCCCccc-ccHHHHHHHHHHH---h-ccCCEEEE-EccCCCCCCc-c-
Confidence 1122 35777888887765 688887 22211 1133443332100 0 00111110 0000000011 1
Q ss_pred hhhhcCCCCCHHHHHHHHHhC---------CCCEEEEcc--CCHHH----HHHHhhCC
Q 025657 207 VANQIDRSLNWKDVKWLQTIT---------SLPILVKGV--LTAED----GSKLLSKE 249 (249)
Q Consensus 207 ~~~~~~~~~tW~dl~wlr~~~---------~lPivlKGI--l~~eD----A~~A~~~~ 249 (249)
...++.+.|+.++++|+.+ +.||+||=- ++.|| |+.+.++|
T Consensus 183 --~~~~~~~~~~il~~vr~~~~~~~~~~g~~~Pv~vKi~~~~~~~~~~~~a~~l~~~G 238 (336)
T 1f76_A 183 --TLQYGEALDDLLTAIKNKQNDLQAMHHKYVPIAVKIAPDLSEEELIQVADSLVRHN 238 (336)
T ss_dssp --GGGSHHHHHHHHHHHHHHHHHHHHHHTSCCCEEEECCSCCCHHHHHHHHHHHHHTT
T ss_pred --cccCHHHHHHHHHHHHHHHHhhhhcccccCceEEEecCCCCHHHHHHHHHHHHHcC
Confidence 1124567899999999998 899999922 22235 67777765
No 19
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=98.70 E-value=2.4e-08 Score=87.79 Aligned_cols=123 Identities=20% Similarity=0.210 Sum_probs=89.0
Q ss_pred cCCcEEecCCCCCCHHHH------Hhc-CCCceeEEEccc-------cChHHHHHHHHHHHHcCCcEEEEeecCCCCCCc
Q 025657 103 AGTIMTLSSWATSSVEEV------SST-GPGIRFFQLYVT-------KHRNVDAQLVKRAERAGFKAIALTVDTPRLGRR 168 (249)
Q Consensus 103 ~gi~~~lss~ss~sleei------a~~-~~~~~wfQlY~~-------~d~~~~~~li~rA~~aG~~alvvTvD~p~~g~R 168 (249)
.++.+.--|.+.++-||- +.. ..+..|+||++. .|...+.+..++.++.|++.+.+++|.|+.++|
T Consensus 72 ~~~~~lpNTag~~ta~eAv~~a~lare~~~~~~~iKlEv~~d~~~llpD~~~tv~aa~~L~~~Gf~Vlpy~~dd~~~akr 151 (265)
T 1wv2_A 72 DRYTILPNTAGCYDAVEAVRTCRLARELLDGHNLVKLEVLADQKTLFPNVVETLKAAEQLVKDGFDVMVYTSDDPIIARQ 151 (265)
T ss_dssp TTSEEEEECTTCCSHHHHHHHHHHHHTTTTSCCEEEECCBSCTTTCCBCHHHHHHHHHHHHTTTCEEEEEECSCHHHHHH
T ss_pred cCCEECCcCCCCCCHHHHHHHHHHHHHHcCCCCeEEEEeecCccccCcCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHH
Confidence 344444444444555543 333 346789999998 566666666677777799999999999999999
Q ss_pred hhhhhccCCCCCccccccccccccCCCCCCCCchhhhHhhhhcCCCCCHHHHHHHHHhCCCCEEEE-ccCCHHHHHHHhh
Q 025657 169 EADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVK-GVLTAEDGSKLLS 247 (249)
Q Consensus 169 e~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tW~dl~wlr~~~~lPivlK-GIl~~eDA~~A~~ 247 (249)
..++...+.+|.... .+ .+ .+-.+|+-|+.+++..+.|||+. ||.+|+||.+|.+
T Consensus 152 l~~~G~~aVmPlg~p--------IG-----sG-----------~Gi~~~~lI~~I~e~~~vPVI~eGGI~TPsDAa~Ame 207 (265)
T 1wv2_A 152 LAEIGCIAVMPLAGL--------IG-----SG-----------LGICNPYNLRIILEEAKVPVLVDAGVGTASDAAIAME 207 (265)
T ss_dssp HHHSCCSEEEECSSS--------TT-----CC-----------CCCSCHHHHHHHHHHCSSCBEEESCCCSHHHHHHHHH
T ss_pred HHHhCCCEEEeCCcc--------CC-----CC-----------CCcCCHHHHHHHHhcCCCCEEEeCCCCCHHHHHHHHH
Confidence 999887665542100 00 00 01247999999999999999999 9999999999998
Q ss_pred CC
Q 025657 248 KE 249 (249)
Q Consensus 248 ~~ 249 (249)
.|
T Consensus 208 LG 209 (265)
T 1wv2_A 208 LG 209 (265)
T ss_dssp HT
T ss_pred cC
Confidence 76
No 20
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=98.42 E-value=1.6e-06 Score=79.92 Aligned_cols=146 Identities=20% Similarity=0.234 Sum_probs=96.2
Q ss_pred hhcccceeccccCCC--CCCccceeec-CcccccceeeccccccccCCChhhHHHHHHHHhcCCcEEecCCCCCCHHHHH
Q 025657 45 AFSRILFRPRILRDV--SKIDMTTTVL-GFNISMPIMIAPTAFQKMAHPEGECATARAASAAGTIMTLSSWATSSVEEVS 121 (249)
Q Consensus 45 af~~~~l~pr~l~~v--~~~d~st~ll-G~~~~~Pi~iaP~g~~~l~h~~gE~~~AraA~~~gi~~~lss~ss~sleeia 121 (249)
.|+++.|+|. +.++ +++|++|.|. +..+..||+.+||... .|..+|.+.++.|-.-++. .+.+.|+..
T Consensus 15 ~fddv~lvp~-~~~~~~~~vdl~t~lt~~~~l~~Pii~apM~~v------s~~~lA~avA~aGGlg~i~--~~~s~e~~~ 85 (366)
T 4fo4_A 15 TFDDVLLVPA-HSTVLPNTADLRTRLTKNIALNIPMVSASMDTV------TEARLAIALAQEGGIGFIH--KNMSIEQQA 85 (366)
T ss_dssp CGGGEEECCC-CCCCCGGGCBCCEEEETTEEESSSEEECCCTTT------CSHHHHHHHHHTTCEEEEC--SSSCHHHHH
T ss_pred CcceEEEECC-CCCCChhhcccceecccccccCCCEEeCCCCCC------ChHHHHHHHHHcCCceEee--cCCCHHHHH
Confidence 5899999997 5554 4789999998 5889999999998743 2456776655554444443 246777653
Q ss_pred hc----CC-CceeEEEccccChHHHHHHHHHHHHcCCcEEEEeecCCCCCCchhhhhccCCCCCccccccccccccCCCC
Q 025657 122 ST----GP-GIRFFQLYVTKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMD 196 (249)
Q Consensus 122 ~~----~~-~~~wfQlY~~~d~~~~~~li~rA~~aG~~alvvTvD~p~~g~Re~d~r~~~~~p~~~~~~~~~~~~~~~~~ 196 (249)
+. .. ++.-..+=+..+ ....+.++.+.++|++.|+|+ +.. |. |
T Consensus 86 ~~i~~vk~~~~l~vga~vg~~-~~~~~~~~~lieaGvd~I~id--ta~-G~-----------~----------------- 133 (366)
T 4fo4_A 86 AQVHQVKISGGLRVGAAVGAA-PGNEERVKALVEAGVDVLLID--SSH-GH-----------S----------------- 133 (366)
T ss_dssp HHHHHHHTTTSCCCEEECCSC-TTCHHHHHHHHHTTCSEEEEE--CSC-TT-----------S-----------------
T ss_pred HHHHHHHhcCceeEEEEeccC-hhHHHHHHHHHhCCCCEEEEe--CCC-CC-----------C-----------------
Confidence 21 11 111122211111 123466788889999987664 322 10 0
Q ss_pred CCCCchhhhHhhhhcCCCCCH-HHHHHHHHhC-CCCEEEEccCCHHHHHHHhhCC
Q 025657 197 KTDDSGLASYVANQIDRSLNW-KDVKWLQTIT-SLPILVKGVLTAEDGSKLLSKE 249 (249)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~tW-~dl~wlr~~~-~lPivlKGIl~~eDA~~A~~~~ 249 (249)
-.| +.|+++|+.+ +.||++..|.++|+|+.|.++|
T Consensus 134 ------------------~~~~~~I~~ik~~~p~v~Vi~G~v~t~e~A~~a~~aG 170 (366)
T 4fo4_A 134 ------------------EGVLQRIRETRAAYPHLEIIGGNVATAEGARALIEAG 170 (366)
T ss_dssp ------------------HHHHHHHHHHHHHCTTCEEEEEEECSHHHHHHHHHHT
T ss_pred ------------------HHHHHHHHHHHHhcCCCceEeeeeCCHHHHHHHHHcC
Confidence 012 4589999998 7899998899999999999886
No 21
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=98.38 E-value=2.7e-06 Score=76.04 Aligned_cols=143 Identities=15% Similarity=0.138 Sum_probs=82.1
Q ss_pred CccceeecCcccccceeeccccccccCCChhhHHHHHHHHhcCCcEEe-cCCCCCC------------------------
Q 025657 62 IDMTTTVLGFNISMPIMIAPTAFQKMAHPEGECATARAASAAGTIMTL-SSWATSS------------------------ 116 (249)
Q Consensus 62 ~d~st~llG~~~~~Pi~iaP~g~~~l~h~~gE~~~AraA~~~gi~~~l-ss~ss~s------------------------ 116 (249)
+|++++++|.+++.||++|+.. .+.++|. .+.+.+.|+.+++ .|.+..+
T Consensus 2 ~dl~~~i~g~~l~nPi~~Aag~----~~~~~~~--~~~~~~~G~g~v~~~~v~~~~~~gn~~pr~~~~~~~~in~~g~~~ 75 (314)
T 2e6f_A 2 MCLKLNLLDHVFANPFMNAAGV----LCSTEED--LRCMTASSSGALVSKSCTSAPRDGNPEPRYMAFPLGSINSMGLPN 75 (314)
T ss_dssp CCCCEEETTEEESSSEEECTTS----SCSSHHH--HHHHHHSSCSCEECCCBCSSCBCCSCSCCEEEETTEEEECCCCCB
T ss_pred CCcceEECCEecCCCcEECCCC----CCCCHHH--HHHHHHCCCCEEEeCccCCcccCCCCCCcEEecccceeecCCCCC
Confidence 5899999999999999999732 1334444 4668899998754 3322221
Q ss_pred --HH----HHHhc-C-C-CceeEEEccccChHHHHHHHHHHHHcCCc---EEEEeecCCCCCCchhhhhccCCCCCcccc
Q 025657 117 --VE----EVSST-G-P-GIRFFQLYVTKHRNVDAQLVKRAERAGFK---AIALTVDTPRLGRREADIKNRFVLPPHLTL 184 (249)
Q Consensus 117 --le----eia~~-~-~-~~~wfQlY~~~d~~~~~~li~rA~~aG~~---alvvTvD~p~~g~Re~d~r~~~~~p~~~~~ 184 (249)
++ ++... . + .+...|+. -.+.+...+.+++++++|++ +|-+.+-+|.. .|.+
T Consensus 76 ~g~~~~~~~~~~~~~~~~~p~~~~i~-g~~~~~~~~~a~~~~~~g~d~~~~iein~~~P~~-~g~~-------------- 139 (314)
T 2e6f_A 76 LGFDFYLKYASDLHDYSKKPLFLSIS-GLSVEENVAMVRRLAPVAQEKGVLLELNLSCPNV-PGKP-------------- 139 (314)
T ss_dssp SCHHHHHHHHHHTCCTTTCCEEEEEC-CSSHHHHHHHHHHHHHHHHHHCCEEEEECCCCCS-TTCC--------------
T ss_pred cCHHHHHHHHHHHhhcCCCcEEEEeC-CCCHHHHHHHHHHHHHhCCCcCceEEEEcCCCCC-CCch--------------
Confidence 11 12211 1 1 23344443 12334444555555555555 55555544442 1100
Q ss_pred ccccccccCCCCCCCCchhhhHhhhhcCCCCCHHHHHHHHHhCCCCEEEEcc--CCHHH----HHHHhhCC
Q 025657 185 KNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKGV--LTAED----GSKLLSKE 249 (249)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tW~dl~wlr~~~~lPivlKGI--l~~eD----A~~A~~~~ 249 (249)
... .++...++.++++|+.++.||+||-- .+.+| |+.+.++|
T Consensus 140 -----------------~~g------~~~~~~~~ii~~vr~~~~~Pv~vK~~~~~~~~~~~~~a~~~~~aG 187 (314)
T 2e6f_A 140 -----------------QVA------YDFEAMRTYLQQVSLAYGLPFGVKMPPYFDIAHFDTAAAVLNEFP 187 (314)
T ss_dssp -----------------CGG------GSHHHHHHHHHHHHHHHCSCEEEEECCCCCHHHHHHHHHHHHTCT
T ss_pred -----------------hhc------CCHHHHHHHHHHHHHhcCCCEEEEECCCCCHHHHHHHHHHHHhcC
Confidence 000 01122367899999999999999943 46678 77777776
No 22
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=98.38 E-value=4e-07 Score=82.02 Aligned_cols=137 Identities=18% Similarity=0.072 Sum_probs=94.1
Q ss_pred ccccceeeccccccccCCChhhHHHHHHHHhcCCcEEecCCCCCC---------HHHHHhcCCCceeEEEccccChHHHH
Q 025657 72 NISMPIMIAPTAFQKMAHPEGECATARAASAAGTIMTLSSWATSS---------VEEVSSTGPGIRFFQLYVTKHRNVDA 142 (249)
Q Consensus 72 ~~~~Pi~iaP~g~~~l~h~~gE~~~AraA~~~gi~~~lss~ss~s---------leeia~~~~~~~wfQlY~~~d~~~~~ 142 (249)
++..||++|||+.. . +....+.+++.|..++++-+.+.+ ++.+......+.++||+ -.+.+...
T Consensus 2 ~l~nri~~APM~~~--t----~~~~r~~~~~~G~gli~te~~~~~~~~~~~~~~~~~l~~~~~~~~~~QL~-g~~~~~~~ 74 (318)
T 1vhn_A 2 SLEVKVGLAPMAGY--T----DSAFRTLAFEWGADFAFSEMVSAKGFLMNSQKTEELLPQPHERNVAVQIF-GSEPNELS 74 (318)
T ss_dssp ---CEEEECCCTTT--C----SHHHHHHHHTTTCCCEECSCEEHHHHHTTCHHHHHHSCCTTCTTEEEEEE-CSCHHHHH
T ss_pred ccCCCEEECCCCCC--C----cHHHHHHHHHHCcCEEEeCCEEEcccccCCHhHHHhhhCcCCCeEEEEeC-CCCHHHHH
Confidence 46789999998732 2 356777788888777766543211 22221112367899998 66788888
Q ss_pred HHHHHHHHcCCcEEEEeecCCCCCCchhhhhccCCCCCccccccccccccCCCCCCCCchhhhHhhhhcCCCCCHHHHHH
Q 025657 143 QLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKW 222 (249)
Q Consensus 143 ~li~rA~~aG~~alvvTvD~p~~g~Re~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tW~dl~w 222 (249)
+..++|+++ |++|-|++.+|....|. .++. + .-..++.+.|+.+++
T Consensus 75 ~aa~~a~~~-~d~Iein~gcP~~~~r~----~~~G-----------~------------------~l~~~~~~~~eiv~~ 120 (318)
T 1vhn_A 75 EAARILSEK-YKWIDLNAGCPVRKVVK----EGAG-----------G------------------ALLKDLRHFRYIVRE 120 (318)
T ss_dssp HHHHHHTTT-CSEEEEEECCCCHHHHH----TTCG-----------G------------------GGGSCHHHHHHHHHH
T ss_pred HHHHHHHHh-CCEEEEECCCCcHhcCC----CCcc-----------c------------------chhhCHHHHHHHHHH
Confidence 999999999 99999999988742221 1110 0 001245678899999
Q ss_pred HHHhCCCCEEEE---ccCCH---HHHHHHhhCC
Q 025657 223 LQTITSLPILVK---GVLTA---EDGSKLLSKE 249 (249)
Q Consensus 223 lr~~~~lPivlK---GIl~~---eDA~~A~~~~ 249 (249)
+|+.++.||.|| |+... +.|+++.++|
T Consensus 121 v~~~~~~pv~vKir~G~~~~~~~~~a~~l~~~G 153 (318)
T 1vhn_A 121 LRKSVSGKFSVKTRLGWEKNEVEEIYRILVEEG 153 (318)
T ss_dssp HHHHCSSEEEEEEESCSSSCCHHHHHHHHHHTT
T ss_pred HHHhhCCCEEEEecCCCChHHHHHHHHHHHHhC
Confidence 999999999999 99765 6788887765
No 23
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=98.17 E-value=5.5e-06 Score=77.27 Aligned_cols=70 Identities=16% Similarity=0.236 Sum_probs=53.2
Q ss_pred hhcccceeccccC-CCCCCccceeecC-cccccceeeccccccccCCChhhHHHHHHHHhcCCcEEecCCCCCCHHHHHh
Q 025657 45 AFSRILFRPRILR-DVSKIDMTTTVLG-FNISMPIMIAPTAFQKMAHPEGECATARAASAAGTIMTLSSWATSSVEEVSS 122 (249)
Q Consensus 45 af~~~~l~pr~l~-~v~~~d~st~llG-~~~~~Pi~iaP~g~~~l~h~~gE~~~AraA~~~gi~~~lss~ss~sleeia~ 122 (249)
.|+++.|+|..-. ..+++|++|.|-. ..+..||+-|||+.. .+-.+|.|.+++|-.-+++. ..|+|++++
T Consensus 11 t~ddvll~P~~~~~~~~~v~l~t~lt~~l~l~~PIi~a~M~~V------s~~~lA~Ava~aGGlGvi~~--~~~~e~~~~ 82 (400)
T 3ffs_A 11 TFEDILLVPNYSEVLPREVSLETKLTKNVSLKIPLISSAMDTV------TEHLMAVGMARLGGIGIIHK--NMDMESQVN 82 (400)
T ss_dssp CGGGEEECCCCBCSCGGGCCCCEESSSSCEESSSEEECSCTTT------CSSHHHHHHHTTTCEEEECS--SSCHHHHHH
T ss_pred CceeEEEecCCCccCHHHccCccchhcccCCCCCEEeCCCCCc------CcHHHHHHHHHCCCEEEeCC--CCCHHHHHH
Confidence 4899999997443 2367999999864 678999999998743 24467888888888888874 678887653
No 24
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=98.14 E-value=3.2e-06 Score=75.08 Aligned_cols=146 Identities=17% Similarity=0.208 Sum_probs=91.4
Q ss_pred CCCccceeecCcccccceeeccccccccCCChhhHHHHHHH--HhcCCcEE-----------------------ecCC--
Q 025657 60 SKIDMTTTVLGFNISMPIMIAPTAFQKMAHPEGECATARAA--SAAGTIMT-----------------------LSSW-- 112 (249)
Q Consensus 60 ~~~d~st~llG~~~~~Pi~iaP~g~~~l~h~~gE~~~AraA--~~~gi~~~-----------------------lss~-- 112 (249)
+++|++++|+|.+++.||++|| |+.+... +. .+.+ ...|...+ +++.
T Consensus 3 ~~~~l~~~~~g~~l~npi~~aa-g~~~~~~---~~--~~~~~~~g~G~~~~~si~~~p~~g~~~p~l~~~~~g~~~~~g~ 76 (311)
T 1ep3_A 3 ENNRLSVKLPGLDLKNPIIPAS-GCFGFGE---EY--AKYYDLNKLGSIMVKATTLHPRFGNPTPRVAETASGMLNAIGL 76 (311)
T ss_dssp CCTTTCEEETTEEESSSEEECT-TSSTTST---TG--GGTSCGGGSSCEEEEEECSSCBCCCCSCCEEEETTEEEECCCC
T ss_pred CCCccceEECCEECCCCcEECC-CCCCCCH---HH--HHHHHhcCCCEEEeCeeccCccCCCCCCeEEECCcccccccCC
Confidence 6789999999999999999999 3333211 22 2222 34453331 2332
Q ss_pred CCCCHHHH--------HhcC-CCceeEEEccccChHHHHHHHHHHHH-cCCcEEEEeecCCCCCCchhhhhccCCCCCcc
Q 025657 113 ATSSVEEV--------SSTG-PGIRFFQLYVTKHRNVDAQLVKRAER-AGFKAIALTVDTPRLGRREADIKNRFVLPPHL 182 (249)
Q Consensus 113 ss~sleei--------a~~~-~~~~wfQlY~~~d~~~~~~li~rA~~-aG~~alvvTvD~p~~g~Re~d~r~~~~~p~~~ 182 (249)
.+.+.+++ .+.. ..+...|+.-. +.+...+..+++++ +|+++|-+.+.+|..-.| +.
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~p~~v~l~~~-~~~~~~~~a~~~~~~~g~d~iei~~~~p~~~~g------~~------ 143 (311)
T 1ep3_A 77 QNPGLEVIMTEKLPWLNENFPELPIIANVAGS-EEADYVAVCAKIGDAANVKAIELNISCPNVKHG------GQ------ 143 (311)
T ss_dssp CBCCHHHHHHTHHHHHHHHCTTSCEEEEECCS-SHHHHHHHHHHHTTSTTEEEEEEECCSEEGGGT------TE------
T ss_pred CCcCHHHHHHHHHHHHHhcCCCCcEEEEEcCC-CHHHHHHHHHHHhccCCCCEEEEeCCCCCCCCc------hh------
Confidence 23344443 2213 35678899643 56667788888888 999999998776552000 00
Q ss_pred ccccccccccCCCCCCCCchhhhHhhhhcCCCCCHHHHHHHHHhCCCCEEEE---ccCCHHH-HHHHhhCC
Q 025657 183 TLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVK---GVLTAED-GSKLLSKE 249 (249)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tW~dl~wlr~~~~lPivlK---GIl~~eD-A~~A~~~~ 249 (249)
.++ .++.+.++-++++|+.++.||++| |+.+.++ |+.+.++|
T Consensus 144 --------~~g-----------------~~~~~~~eii~~v~~~~~~pv~vk~~~~~~~~~~~a~~l~~~G 189 (311)
T 1ep3_A 144 --------AFG-----------------TDPEVAAALVKACKAVSKVPLYVKLSPNVTDIVPIAKAVEAAG 189 (311)
T ss_dssp --------EGG-----------------GCHHHHHHHHHHHHHHCSSCEEEEECSCSSCSHHHHHHHHHTT
T ss_pred --------hhc-----------------CCHHHHHHHHHHHHHhcCCCEEEEECCChHHHHHHHHHHHHcC
Confidence 000 012334577899999999999999 6666666 77777765
No 25
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=97.90 E-value=0.00015 Score=64.52 Aligned_cols=40 Identities=18% Similarity=0.092 Sum_probs=29.8
Q ss_pred cceeecCcccccceeeccccccccCCChhhHHHHHHHHhcCCcEEe
Q 025657 64 MTTTVLGFNISMPIMIAPTAFQKMAHPEGECATARAASAAGTIMTL 109 (249)
Q Consensus 64 ~st~llG~~~~~Pi~iaP~g~~~l~h~~gE~~~AraA~~~gi~~~l 109 (249)
++++++|.+++.||++|| +..+.++| ..+.+.+.|..+++
T Consensus 2 l~~~i~g~~l~npv~~Aa----g~~~~~~~--~~~~~~~~G~g~i~ 41 (311)
T 1jub_A 2 LNTTFANAKFANPFMNAS----GVHCMTIE--DLEELKASQAGAYI 41 (311)
T ss_dssp CCEEETTEEESSSEEECT----TSSCSSHH--HHHHHHHSSCSCCB
T ss_pred CceEECCEEcCCCcEECC----CCCCCCHH--HHHHHHHCCCCEEE
Confidence 679999999999999997 22234444 44677888887765
No 26
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=97.66 E-value=0.00016 Score=63.47 Aligned_cols=99 Identities=18% Similarity=0.305 Sum_probs=62.6
Q ss_pred ceeEEEccccCh----HHHHHHHHHHHHc---CCcEEEEeecCCCCCCchhhhhccCCCCCccccccccccccCCCCCCC
Q 025657 127 IRFFQLYVTKHR----NVDAQLVKRAERA---GFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTD 199 (249)
Q Consensus 127 ~~wfQlY~~~d~----~~~~~li~rA~~a---G~~alvvTvD~p~~g~Re~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~ 199 (249)
..|+||++..|. +...+++++|++. |+..++++++++...++-.+...+|-++ . .+. .+ .+
T Consensus 94 ~~~i~l~i~~d~~~~~~e~~~~~~~a~~~~~~g~~vi~~~~~~~~~a~~~~~~gad~v~~----~---~~~-~G----t~ 161 (264)
T 1xm3_A 94 CDMIKVEVIGCSRSLLPDPVETLKASEQLLEEGFIVLPYTSDDVVLARKLEELGVHAIMP----G---ASP-IG----SG 161 (264)
T ss_dssp CSSEEECCBCCTTTCCBCHHHHHHHHHHHHHTTCCEEEEECSCHHHHHHHHHHTCSCBEE----C---SSS-TT----CC
T ss_pred CCeEEEeecCCCcccccchHHHHHHHHHHHCCCeEEEEEcCCCHHHHHHHHHhCCCEEEE----C---Ccc-cC----CC
Confidence 458888876654 3455777888877 8888877777543222222222222110 0 000 00 00
Q ss_pred CchhhhHhhhhcCCCCCHHHHHHHHHhCCCCEEEE-ccCCHHHHHHHhhCC
Q 025657 200 DSGLASYVANQIDRSLNWKDVKWLQTITSLPILVK-GVLTAEDGSKLLSKE 249 (249)
Q Consensus 200 ~~~~~~~~~~~~~~~~tW~dl~wlr~~~~lPivlK-GIl~~eDA~~A~~~~ 249 (249)
....+|+.++++++.++.|+++. ||.++|||..++++|
T Consensus 162 ------------~~~~~~~~l~~i~~~~~iPviv~gGI~t~eda~~~~~~G 200 (264)
T 1xm3_A 162 ------------QGILNPLNLSFIIEQAKVPVIVDAGIGSPKDAAYAMELG 200 (264)
T ss_dssp ------------CCCSCHHHHHHHHHHCSSCBEEESCCCSHHHHHHHHHTT
T ss_pred ------------CCCCCHHHHHHHHhcCCCCEEEEeCCCCHHHHHHHHHcC
Confidence 01225889999999999999998 899999999998876
No 27
>1ea0_A Glutamate synthase [NADPH] large chain; oxidoreductase, iron sulphur flavoprotein; HET: OMT FMN AKG; 3.0A {Azospirillum brasilense} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 2vdc_A*
Probab=97.59 E-value=0.00028 Score=74.61 Aligned_cols=168 Identities=13% Similarity=0.101 Sum_probs=97.4
Q ss_pred hhcccceeccccCCC--CCCccceeecCcccccceeeccccccccCCChhhHHHHHHHHhcCCcEEecCCCCCCHHHHHh
Q 025657 45 AFSRILFRPRILRDV--SKIDMTTTVLGFNISMPIMIAPTAFQKMAHPEGECATARAASAAGTIMTLSSWATSSVEEVSS 122 (249)
Q Consensus 45 af~~~~l~pr~l~~v--~~~d~st~llG~~~~~Pi~iaP~g~~~l~h~~gE~~~AraA~~~gi~~~lss~ss~sleeia~ 122 (249)
.|+++.+.+..+..+ +++|+++ .+..||+++||++..+ .++...++|+||.++|+.+.++..+ .+.|+...
T Consensus 824 ~~~dl~~~~~~l~~i~~~ev~~~~-----~I~~Pf~isaMS~Gal-S~ea~~aLA~Aa~~aGg~~~tGeGg-~~pe~~~~ 896 (1479)
T 1ea0_A 824 QLRDLLELRSTKAPVPVDEVESIT-----AIRKRFITPGMSMGAL-SPEAHGTLNVAMNRIGAKSDSGEGG-EDPARFRP 896 (1479)
T ss_dssp SGGGGEEECCSSCCCCGGGSCCHH-----HHHTTEEEEECCBTTB-CHHHHHHHHHHHHHTTCEEECCTTC-CCGGGSSB
T ss_pred chhhhhhccCCCCCCCcccccccc-----cccCCeEecCcccccc-CHHHHHHHHHHHHHcCCeeEcCCCc-cCHHHhhh
Confidence 467777777666644 4666666 7799999999997654 5778889999999999999988653 45555532
Q ss_pred c--C--CCceeEEEccccChHHHHHHHHHHHHcCCcEEEEeecCCC----CCC----ch----hhhhccCCCCCcccccc
Q 025657 123 T--G--PGIRFFQLYVTKHRNVDAQLVKRAERAGFKAIALTVDTPR----LGR----RE----ADIKNRFVLPPHLTLKN 186 (249)
Q Consensus 123 ~--~--~~~~wfQlY~~~d~~~~~~li~rA~~aG~~alvvTvD~p~----~g~----Re----~d~r~~~~~p~~~~~~~ 186 (249)
. + ......|+... .-..+...+ ..++++=+-+-.-. .|. +. ..+|. ++++..+.
T Consensus 897 ~~~g~~~~~~IrQ~asg-~FGVn~~~l-----~~a~~ieIKigQGAKpG~GG~Lp~~kv~~~IA~~R~---~~~Gv~li- 966 (1479)
T 1ea0_A 897 DKNGDNWNSAIKQVASG-RFGVTAEYL-----NQCRELEIKVAQGAKPGEGGQLPGFKVTEMIARLRH---STPGVMLI- 966 (1479)
T ss_dssp CTTSCBCCCSEEEECSS-CTTCCHHHH-----TSCSEEEEECCCTTSTTTCCEECGGGCCHHHHHHHT---CCTTCCEE-
T ss_pred ccccchhhhhhhhhcCC-CCCcChHHc-----cccchHHHHHhccCCCCcCCCCCHHHHHHHHHHHcC---CCCCCCcc-
Confidence 1 1 12246787531 122222322 24455544442110 000 00 00110 01000000
Q ss_pred ccccccCCCCCCCCchhhhHhhhhcCCCCCHH----HHHHHHHhC-CCCEEEEccC---CHHHHHHHhhCC
Q 025657 187 YEGLYIGKMDKTDDSGLASYVANQIDRSLNWK----DVKWLQTIT-SLPILVKGVL---TAEDGSKLLSKE 249 (249)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tW~----dl~wlr~~~-~lPivlKGIl---~~eDA~~A~~~~ 249 (249)
. +. ....-.+|+ .|+|||+.| +.||+||+|. .+++|+.++++|
T Consensus 967 ----s----P~------------~~~d~~s~edl~~~I~~Lk~~~~~~PV~VKlv~~~gi~~~A~~a~~AG 1017 (1479)
T 1ea0_A 967 ----S----PP------------PHHDIYSIEDLAQLIYDLKQINPDAKVTVKLVSRSGIGTIAAGVAKAN 1017 (1479)
T ss_dssp ----C----CS------------SCTTCSSHHHHHHHHHHHHHHCTTCEEEEEEECCTTHHHHHHHHHHTT
T ss_pred ----C----CC------------CCcCcCCHHHHHHHHHHHHHhCCCCCEEEEEcCCCChHHHHHHHHHcC
Confidence 0 00 000113454 488999999 7899999997 488999998876
No 28
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=97.56 E-value=0.0006 Score=61.46 Aligned_cols=118 Identities=18% Similarity=0.176 Sum_probs=78.0
Q ss_pred eeecCcccccceeeccccccccCCChhhHHHHHHHHhcCCcEEecCCCCCCHHHHH-------hcCCCceeEEEccccCh
Q 025657 66 TTVLGFNISMPIMIAPTAFQKMAHPEGECATARAASAAGTIMTLSSWATSSVEEVS-------STGPGIRFFQLYVTKHR 138 (249)
Q Consensus 66 t~llG~~~~~Pi~iaP~g~~~l~h~~gE~~~AraA~~~gi~~~lss~ss~sleeia-------~~~~~~~wfQlY~~~d~ 138 (249)
+++|| +..||+.+||++ +. ...++.++.++|..-++.+. ..+.+++. +....+...|++....
T Consensus 6 ~~~l~--~~~Pii~apM~g--~s----~~~la~av~~aG~lG~i~~~-~~~~~~~~~~i~~i~~~~~~p~gvnl~~~~~- 75 (332)
T 2z6i_A 6 TELLK--IDYPIFQGGMAW--VA----DGDLAGAVSKAGGLGIIGGG-NAPKEVVKANIDKIKSLTDKPFGVNIMLLSP- 75 (332)
T ss_dssp HHHHT--CSSSEEECCCTT--TC----CHHHHHHHHHHTSBEEEECT-TCCHHHHHHHHHHHHHHCCSCEEEEECTTST-
T ss_pred hHHhC--CCCCEEeCCCCC--CC----cHHHHHHHHhCCCcEEeCCC-CCCHHHHHHHHHHHHHhcCCCEEEEecCCCC-
Confidence 34666 788999999873 32 24577778888864444432 33544432 2223456789876322
Q ss_pred HHHHHHHHHHHHcCCcEEEEeecCCCCCCchhhhhccCCCCCccccccccccccCCCCCCCCchhhhHhhhhcCCCCCHH
Q 025657 139 NVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWK 218 (249)
Q Consensus 139 ~~~~~li~rA~~aG~~alvvTvD~p~~g~Re~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tW~ 218 (249)
. ..+.++++.++|++.|.+..+.|. +
T Consensus 76 ~-~~~~~~~a~~~g~d~V~~~~g~p~-----------------------------------------------------~ 101 (332)
T 2z6i_A 76 F-VEDIVDLVIEEGVKVVTTGAGNPS-----------------------------------------------------K 101 (332)
T ss_dssp T-HHHHHHHHHHTTCSEEEECSSCGG-----------------------------------------------------G
T ss_pred C-HHHHHHHHHHCCCCEEEECCCChH-----------------------------------------------------H
Confidence 2 347789999999999877654210 1
Q ss_pred HHHHHHHhCCCCEEEEccCCHHHHHHHhhCC
Q 025657 219 DVKWLQTITSLPILVKGVLTAEDGSKLLSKE 249 (249)
Q Consensus 219 dl~wlr~~~~lPivlKGIl~~eDA~~A~~~~ 249 (249)
.++++|+ ++.|+++| |.++++|+++.+.|
T Consensus 102 ~i~~l~~-~g~~v~~~-v~~~~~a~~~~~~G 130 (332)
T 2z6i_A 102 YMERFHE-AGIIVIPV-VPSVALAKRMEKIG 130 (332)
T ss_dssp THHHHHH-TTCEEEEE-ESSHHHHHHHHHTT
T ss_pred HHHHHHH-cCCeEEEE-eCCHHHHHHHHHcC
Confidence 2566776 48899887 89999999988775
No 29
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=97.38 E-value=0.002 Score=57.79 Aligned_cols=120 Identities=17% Similarity=0.169 Sum_probs=79.5
Q ss_pred eeecCcccccceeeccccccccCCChhhHHHHHHHHhcCCcEEecCCCCCCHHHHH-------hcCCCceeEEEcccc--
Q 025657 66 TTVLGFNISMPIMIAPTAFQKMAHPEGECATARAASAAGTIMTLSSWATSSVEEVS-------STGPGIRFFQLYVTK-- 136 (249)
Q Consensus 66 t~llG~~~~~Pi~iaP~g~~~l~h~~gE~~~AraA~~~gi~~~lss~ss~sleeia-------~~~~~~~wfQlY~~~-- 136 (249)
|++|| +..||+.+||++ +. +..++.++.++|..-+++..+..+.+++. +....+.-.++++..
T Consensus 9 ~~~l~--~~~Pii~apM~g--vs----~~~la~av~~aGglG~i~~~~~~s~~~l~~~i~~i~~~~~~p~~v~l~v~~~~ 80 (328)
T 2gjl_A 9 TETFG--VEHPIMQGGMQW--VG----RAEMAAAVANAGGLATLSALTQPSPEALAAEIARCRELTDRPFGVNLTLLPTQ 80 (328)
T ss_dssp HHHHT--CSSSEEECCCTT--TC----SHHHHHHHHHTTSBCEEETTTSSSHHHHHHHHHHHHHHCSSCCEEEEEECCCS
T ss_pred HHHhC--CCCCEEECCCCC--CC----cHHHHHHHHHCCCeEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEeccccc
Confidence 45675 578999999863 32 34588888888865556544333455542 222334557888752
Q ss_pred -ChHHHHHHHHHHHHcCCcEEEEeecCCCCCCchhhhhccCCCCCccccccccccccCCCCCCCCchhhhHhhhhcCCCC
Q 025657 137 -HRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSL 215 (249)
Q Consensus 137 -d~~~~~~li~rA~~aG~~alvvTvD~p~~g~Re~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (249)
+.+ ..+.++.+.++|++.|.+..+.|
T Consensus 81 ~~~~-~~~~~~~~~~~g~d~V~~~~g~p---------------------------------------------------- 107 (328)
T 2gjl_A 81 KPVP-YAEYRAAIIEAGIRVVETAGNDP---------------------------------------------------- 107 (328)
T ss_dssp SCCC-HHHHHHHHHHTTCCEEEEEESCC----------------------------------------------------
T ss_pred cCcc-HHHHHHHHHhcCCCEEEEcCCCc----------------------------------------------------
Confidence 222 45778888899999877654311
Q ss_pred CHHHHHHHHHhCCCCEEEEccCCHHHHHHHhhCC
Q 025657 216 NWKDVKWLQTITSLPILVKGVLTAEDGSKLLSKE 249 (249)
Q Consensus 216 tW~dl~wlr~~~~lPivlKGIl~~eDA~~A~~~~ 249 (249)
++.++++++. +.|+++ .|.++++|+++.++|
T Consensus 108 -~~~~~~l~~~-gi~vi~-~v~t~~~a~~~~~~G 138 (328)
T 2gjl_A 108 -GEHIAEFRRH-GVKVIH-KCTAVRHALKAERLG 138 (328)
T ss_dssp -HHHHHHHHHT-TCEEEE-EESSHHHHHHHHHTT
T ss_pred -HHHHHHHHHc-CCCEEe-eCCCHHHHHHHHHcC
Confidence 3456778776 778775 499999999998775
No 30
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=96.96 E-value=0.0071 Score=54.99 Aligned_cols=168 Identities=14% Similarity=0.129 Sum_probs=93.2
Q ss_pred cccceeeccccccccCCChhhHHHHHHHHhcCC-cEEecCCCCC-C-----HHHHHhcC--CCceeEEEccccChHHHHH
Q 025657 73 ISMPIMIAPTAFQKMAHPEGECATARAASAAGT-IMTLSSWATS-S-----VEEVSSTG--PGIRFFQLYVTKHRNVDAQ 143 (249)
Q Consensus 73 ~~~Pi~iaP~g~~~l~h~~gE~~~AraA~~~gi-~~~lss~ss~-s-----leeia~~~--~~~~wfQlY~~~d~~~~~~ 143 (249)
+..||++|||++. .+..+...+++.|- .++++-+.+. + -+.+.+.. ..+...||+ -.+.+...+
T Consensus 2 l~nriv~APM~g~------td~~~r~~~r~~Gg~gli~te~~~~~~~~~~~~~~~~~~~~~~~p~~vQL~-g~~p~~~~~ 74 (350)
T 3b0p_A 2 LDPRLSVAPMVDR------TDRHFRFLVRQVSLGVRLYTEMTVDQAVLRGNRERLLAFRPEEHPIALQLA-GSDPKSLAE 74 (350)
T ss_dssp CCCSEEECCCTTT------SSHHHHHHHHHHCSSSBEECCCEEHHHHHHSCHHHHHCCCGGGCSEEEEEE-CSCHHHHHH
T ss_pred CCCCEEECCCCCC------CHHHHHHHHHHcCCCCEEEeCCEEechhhcCCHHHHhccCCCCCeEEEEeC-CCCHHHHHH
Confidence 5679999998742 24444445666653 4444333221 1 12344332 257899998 457788888
Q ss_pred HHHHHHHcCCcEEEEeecCCCCCCc-----------h-------hhhhccCCCCCcccccc-ccc-------ccc-CCCC
Q 025657 144 LVKRAERAGFKAIALTVDTPRLGRR-----------E-------ADIKNRFVLPPHLTLKN-YEG-------LYI-GKMD 196 (249)
Q Consensus 144 li~rA~~aG~~alvvTvD~p~~g~R-----------e-------~d~r~~~~~p~~~~~~~-~~~-------~~~-~~~~ 196 (249)
..++++++||..|-|...+|..-.| . +.+|....+|-.+.++. ... ..+ ..+.
T Consensus 75 aA~~a~~~G~D~IeIn~gcP~~~~~~d~~G~~l~~~~~~~~eiv~av~~~v~~PV~vKiR~g~~~~~~~~~~~~~a~~l~ 154 (350)
T 3b0p_A 75 AARIGEAFGYDEINLNLGCPSEKAQEGGYGACLLLDLARVREILKAMGEAVRVPVTVKMRLGLEGKETYRGLAQSVEAMA 154 (350)
T ss_dssp HHHHHHHTTCSEEEEEECCCSHHHHHTTCGGGGGGCHHHHHHHHHHHHHHCSSCEEEEEESCBTTCCCHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEECCcCCCCcCcCCCcchhHHhCHHHHHHHHHHHHHHhCCceEEEEecCcCccccHHHHHHHHHHHH
Confidence 8999999999999999988873222 1 12232223342221110 000 000 0000
Q ss_pred CC--------CCchhhhHhhh--hcCCCCCHHHHHHHHHhC-CCCEEEEc-cCCHHHHHHHhh
Q 025657 197 KT--------DDSGLASYVAN--QIDRSLNWKDVKWLQTIT-SLPILVKG-VLTAEDGSKLLS 247 (249)
Q Consensus 197 ~~--------~~~~~~~~~~~--~~~~~~tW~dl~wlr~~~-~lPivlKG-Il~~eDA~~A~~ 247 (249)
.. .......+... ...+..+|+.++.+++.. ++||+.=| |.+++||..+++
T Consensus 155 ~aG~d~I~V~~r~~~~g~~g~~~~~~~~~~~~~i~~ik~~~~~iPVianGgI~s~eda~~~l~ 217 (350)
T 3b0p_A 155 EAGVKVFVVHARSALLALSTKANREIPPLRHDWVHRLKGDFPQLTFVTNGGIRSLEEALFHLK 217 (350)
T ss_dssp HTTCCEEEEECSCBC----------CCCCCHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHT
T ss_pred HcCCCEEEEecCchhcccCcccccCCCcccHHHHHHHHHhCCCCeEEEECCcCCHHHHHHHHh
Confidence 00 00000000000 012356899999999999 89999855 789999999886
No 31
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=96.69 E-value=0.013 Score=53.52 Aligned_cols=144 Identities=10% Similarity=0.032 Sum_probs=83.1
Q ss_pred eccccCCCCCCccceeecCcccccceeeccccccccCCChhhHHHHHHHHhcCCcEE-ecCCC-----------------
Q 025657 52 RPRILRDVSKIDMTTTVLGFNISMPIMIAPTAFQKMAHPEGECATARAASAAGTIMT-LSSWA----------------- 113 (249)
Q Consensus 52 ~pr~l~~v~~~d~st~llG~~~~~Pi~iaP~g~~~l~h~~gE~~~AraA~~~gi~~~-lss~s----------------- 113 (249)
.|+--..++++|++|+++|.++..||++|. +..-.++ ...+.....|..++ +.|..
T Consensus 25 ~~~~~~~~~~~~L~~~~~Gl~~~NPv~lAA----G~~~~~~--e~~~~l~~~G~G~v~~ktvt~~pq~GNp~PR~~~~~~ 98 (354)
T 4ef8_A 25 TGGQQMGRGSMSLQVNLLNNTFANPFMNAA----GVMCTTT--EELVAMTESASGSLVSKSCTPALREGNPTPRYQALPL 98 (354)
T ss_dssp ---------CCCCCEEETTEEESSSEEECT----TSSCSSH--HHHHHHHHSSCSCEEEEEECSSCBCCSCSCCEEEETT
T ss_pred CchhhcCCCCCCcceEECCEECCCCCEecc----CCCCCCH--HHHHHHHHcCCCeEEeCcccCcccCCCCCCcEEecch
Confidence 344445677899999999999999999987 2211223 34455566666443 22221
Q ss_pred ---------CCCHHH----HHhc--CC-CceeEEEccccChHHHHHHHHHHH---HcCCcEEEEeecCCCCCCchhhhhc
Q 025657 114 ---------TSSVEE----VSST--GP-GIRFFQLYVTKHRNVDAQLVKRAE---RAGFKAIALTVDTPRLGRREADIKN 174 (249)
Q Consensus 114 ---------s~slee----ia~~--~~-~~~wfQlY~~~d~~~~~~li~rA~---~aG~~alvvTvD~p~~g~Re~d~r~ 174 (249)
+..+|. +.+. .+ .+...||. -.+.+...+.+++++ ++|+.+|.|.+=+|... .
T Consensus 99 ~~iN~~G~~n~G~~~~~~~l~~~~~~~~~pvivsI~-G~~~~d~~~~a~~l~~~~~~g~d~ielNisCPn~~-------g 170 (354)
T 4ef8_A 99 GSINSMGLPNNGFDFYLAYAAEQHDYGKKPLFLSMS-GLSMRENVEMCKRLAAVATEKGVILELNLSCPNVP-------G 170 (354)
T ss_dssp EEEECCCCCBCCHHHHHHHHHHTCCTTTCCEEEEEC-CSSHHHHHHHHHHHHHHHHHHCCEEEEECSSCCST-------T
T ss_pred hhhccCCCCCcCHHHHHHHHHHHhhcCCCcEEEEec-cCCHHHHHHHHHHHhhhhhcCCCEEEEeCCCCCCC-------C
Confidence 123333 3322 12 35677874 245566667777777 57888988888887731 0
Q ss_pred cCCCCCccccccccccccCCCCCCCCchhhhHhhhhcCCCCCHHHHHHHHHhCCCCEEEEccCCHH
Q 025657 175 RFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKGVLTAE 240 (249)
Q Consensus 175 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tW~dl~wlr~~~~lPivlKGIl~~e 240 (249)
+ +.+ ..++..-.+-++++|+.++.||.||--...+
T Consensus 171 g---------~~l----------------------~~~~e~~~~il~av~~~~~~PV~vKi~p~~d 205 (354)
T 4ef8_A 171 K---------PQV----------------------AYDFDAMRQCLTAVSEVYPHSFGVKMPPYFD 205 (354)
T ss_dssp S---------CCG----------------------GGSHHHHHHHHHHHHHHCCSCEEEEECCCCS
T ss_pred c---------hhh----------------------ccCHHHHHHHHHHHHHhhCCCeEEEecCCCC
Confidence 0 000 0012233567899999999999999665443
No 32
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=96.64 E-value=0.035 Score=50.47 Aligned_cols=138 Identities=15% Similarity=0.101 Sum_probs=73.1
Q ss_pred ccceeeccccccccCCChhhHHHHHHHHhcCCcEEecCCCCCCHHHHH-------hcCCCceeEEEccccCh--------
Q 025657 74 SMPIMIAPTAFQKMAHPEGECATARAASAAGTIMTLSSWATSSVEEVS-------STGPGIRFFQLYVTKHR-------- 138 (249)
Q Consensus 74 ~~Pi~iaP~g~~~l~h~~gE~~~AraA~~~gi~~~lss~ss~sleeia-------~~~~~~~wfQlY~~~d~-------- 138 (249)
..||+.+||++ ++ ....+|.++.++|-.-++++ +..|.|++. +..+.+.-.|++...+.
T Consensus 10 ~~Pii~apMag-gv----s~~~la~av~~aGglG~i~~-~~~s~~~l~~~i~~~~~~~~~p~gVnl~~~~~~~~~~~~~~ 83 (369)
T 3bw2_A 10 PLPIVQAPMAG-GV----SVPQLAAAVCEAGGLGFLAA-GYKTADGMYQEIKRLRGLTGRPFGVNVFMPQPELAESGAVE 83 (369)
T ss_dssp SSSEEECCCTT-TT----SCHHHHHHHHHTTSBEEEEC-TTSCHHHHHHHHHHHHHHCCSCEEEEEECCCCCC---CHHH
T ss_pred cCCEEeCCCCC-CC----CcHHHHHHHHHCCCEEEcCC-CCCCHHHHHHHHHHHHHhCCCCeEEEEecCCCCcccHHHHH
Confidence 88999999875 22 24568888888887666654 345555552 22233334666554432
Q ss_pred HHHHHHHHHHHHcCCcEEEEeecCCCCCCch---hhhhccCCCCCccccccccccccCCCCCCCCchhhhHhhhhcCCCC
Q 025657 139 NVDAQLVKRAERAGFKAIALTVDTPRLGRRE---ADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSL 215 (249)
Q Consensus 139 ~~~~~li~rA~~aG~~alvvTvD~p~~g~Re---~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (249)
+....+...+++.|. .++.|....+. ..++.-... +.. .+.... ...
T Consensus 84 ~~~~~l~~~~~~~g~-----~~~~~~~~~~~~~~~~~~~~~~~----------g~~--------------~V~~~~-g~~ 133 (369)
T 3bw2_A 84 VYAHQLAGEAAWYET-----ELGDPDGGRDDGYDAKLAVLLDD----------PVP--------------VVSFHF-GVP 133 (369)
T ss_dssp HHHHHTHHHHHHTTC-----CCCCSCSCSSTTHHHHHHHHHHS----------CCS--------------EEEEES-SCC
T ss_pred HHHHHHHHHHHHcCC-----CcCcccccccccHHHHHHHHHhc----------CCC--------------EEEEeC-CCC
Confidence 222233344445554 34444322111 000000000 000 000000 122
Q ss_pred CHHHHHHHHHhCCCCEEEEccCCHHHHHHHhhCC
Q 025657 216 NWKDVKWLQTITSLPILVKGVLTAEDGSKLLSKE 249 (249)
Q Consensus 216 tW~dl~wlr~~~~lPivlKGIl~~eDA~~A~~~~ 249 (249)
+++.++++++. +.|+ ++.|.++++|+++.+.|
T Consensus 134 ~~~~i~~~~~~-g~~v-~~~v~t~~~a~~a~~~G 165 (369)
T 3bw2_A 134 DREVIARLRRA-GTLT-LVTATTPEEARAVEAAG 165 (369)
T ss_dssp CHHHHHHHHHT-TCEE-EEEESSHHHHHHHHHTT
T ss_pred cHHHHHHHHHC-CCeE-EEECCCHHHHHHHHHcC
Confidence 57889999884 6665 56799999999998876
No 33
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=96.57 E-value=0.043 Score=49.18 Aligned_cols=114 Identities=15% Similarity=0.141 Sum_probs=71.3
Q ss_pred ccccceeeccccccccCCChhhHHHHHHHHhcCCcEEecCCCCCCHHHHH----h---cCCCceeEEEccccChHHHHHH
Q 025657 72 NISMPIMIAPTAFQKMAHPEGECATARAASAAGTIMTLSSWATSSVEEVS----S---TGPGIRFFQLYVTKHRNVDAQL 144 (249)
Q Consensus 72 ~~~~Pi~iaP~g~~~l~h~~gE~~~AraA~~~gi~~~lss~ss~sleeia----~---~~~~~~wfQlY~~~d~~~~~~l 144 (249)
.+..||+.+||++ +. ...++.++.++|..-+++. ...+.|++. + ....+.-.++.... .. ..+.
T Consensus 24 ~~~~Pii~apM~g--vs----~~~la~av~~aGglG~i~~-~~~~~~~l~~~i~~i~~~~~~p~gVnl~~~~-~~-~~~~ 94 (326)
T 3bo9_A 24 EIEHPILMGGMAW--AG----TPTLAAAVSEAGGLGIIGS-GAMKPDDLRKAISELRQKTDKPFGVNIILVS-PW-ADDL 94 (326)
T ss_dssp TCSSSEEECCCTT--TS----CHHHHHHHHHTTSBEEEEC-TTCCHHHHHHHHHHHHTTCSSCEEEEEETTS-TT-HHHH
T ss_pred CCCCCEEECCCCC--CC----CHHHHHHHHhCCCcEEeCC-CCCCHHHHHHHHHHHHHhcCCCEEEEEeccC-CC-HHHH
Confidence 4578999999884 32 3457888888886555543 234555432 1 12233446665422 22 3577
Q ss_pred HHHHHHcCCcEEEEeecCCCCCCchhhhhccCCCCCccccccccccccCCCCCCCCchhhhHhhhhcCCCCCHHHHHHHH
Q 025657 145 VKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQ 224 (249)
Q Consensus 145 i~rA~~aG~~alvvTvD~p~~g~Re~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tW~dl~wlr 224 (249)
++.+.++|++.+.+..+. | -+.+++++
T Consensus 95 ~~~~~~~g~d~V~l~~g~----------------p-------------------------------------~~~~~~l~ 121 (326)
T 3bo9_A 95 VKVCIEEKVPVVTFGAGN----------------P-------------------------------------TKYIRELK 121 (326)
T ss_dssp HHHHHHTTCSEEEEESSC----------------C-------------------------------------HHHHHHHH
T ss_pred HHHHHHCCCCEEEECCCC----------------c-------------------------------------HHHHHHHH
Confidence 788888999988765432 1 12346666
Q ss_pred HhCCCCEEEEccCCHHHHHHHhhCC
Q 025657 225 TITSLPILVKGVLTAEDGSKLLSKE 249 (249)
Q Consensus 225 ~~~~lPivlKGIl~~eDA~~A~~~~ 249 (249)
+. +.|+ +++|.++++|+++.+.|
T Consensus 122 ~~-g~~v-~~~v~s~~~a~~a~~~G 144 (326)
T 3bo9_A 122 EN-GTKV-IPVVASDSLARMVERAG 144 (326)
T ss_dssp HT-TCEE-EEEESSHHHHHHHHHTT
T ss_pred Hc-CCcE-EEEcCCHHHHHHHHHcC
Confidence 63 5554 56899999999998876
No 34
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=96.56 E-value=0.0085 Score=57.26 Aligned_cols=33 Identities=27% Similarity=0.263 Sum_probs=30.3
Q ss_pred HHHHHHHHHhCC-CCEEEEccCCHHHHHHHhhCC
Q 025657 217 WKDVKWLQTITS-LPILVKGVLTAEDGSKLLSKE 249 (249)
Q Consensus 217 W~dl~wlr~~~~-lPivlKGIl~~eDA~~A~~~~ 249 (249)
++.|+|+|+.++ .|+++++|.++|+|+.|+++|
T Consensus 285 ~~~i~~i~~~~~~~~vi~g~v~t~e~a~~~~~aG 318 (511)
T 3usb_A 285 IDKVKEVRAKYPSLNIIAGNVATAEATKALIEAG 318 (511)
T ss_dssp HHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHHT
T ss_pred hhHHHHHHHhCCCceEEeeeeccHHHHHHHHHhC
Confidence 478999999986 799999999999999999987
No 35
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=96.51 E-value=0.12 Score=46.90 Aligned_cols=97 Identities=12% Similarity=0.150 Sum_probs=63.9
Q ss_pred CccceeecCcccccceeeccccccccCCChhhHHHHHHHHhcCCcEEe-cCCCC--------------------------
Q 025657 62 IDMTTTVLGFNISMPIMIAPTAFQKMAHPEGECATARAASAAGTIMTL-SSWAT-------------------------- 114 (249)
Q Consensus 62 ~d~st~llG~~~~~Pi~iaP~g~~~l~h~~gE~~~AraA~~~gi~~~l-ss~ss-------------------------- 114 (249)
.|++++++|.++..||++|. +..-. .....+.+...|..+++ .|.+.
T Consensus 36 ~~L~~~~~Gl~~~NPv~lAa----G~~~~--~~e~~~~~~~~G~G~v~~ktvt~~pq~gnp~PR~~~~~~~~iN~~G~~n 109 (345)
T 3oix_A 36 VSTHTTIGSFDFDNCLMNAA----GVYCM--TREELAAIDHSEAGSFVTXTGTLEERAGNPQPRYADTKLGSINSMGLPN 109 (345)
T ss_dssp CCCCEEETTEEESCSEEECT----TSSCS--SHHHHHHHHTSSCSBCBCCCBCSSCBCCSCSCCEEECSSEEEECCCCCB
T ss_pred CCcCeEECCEECCCCCEEcC----CCCCC--CHHHHHHHHHcCCCeEEeeeecCCCCCCCCCCcEEecccchhccCCCCC
Confidence 68999999999999999985 21111 22445556677765543 22221
Q ss_pred CCH----HHHHh---c-CCCceeEEEccccChHHHHHHHHHHHHcCCc-EEEEeecCCCC
Q 025657 115 SSV----EEVSS---T-GPGIRFFQLYVTKHRNVDAQLVKRAERAGFK-AIALTVDTPRL 165 (249)
Q Consensus 115 ~sl----eeia~---~-~~~~~wfQlY~~~d~~~~~~li~rA~~aG~~-alvvTvD~p~~ 165 (249)
..+ +++.+ . ...+...||. -.+.+...+..++++++|+. +|.|.+=+|..
T Consensus 110 ~G~~~~~~~l~~~~~~~~~~pvivsI~-g~~~~d~~~~a~~l~~~g~~d~ielNisCPn~ 168 (345)
T 3oix_A 110 LGINYYLDYVTELQKQPDSKNHFLSLV-GMSPEETHTILXMVEASKYQGLVELNLSCPNV 168 (345)
T ss_dssp SCHHHHHHHHHHHHHSTTCCCCEEEEC-CSSHHHHHHHHHHHHHSSCCSEEEEECSCCCS
T ss_pred hhHHHHHHHHHHHhhccCCCCEEEEec-CCCHHHHHHHHHHHhccCCCcEEEEecCCCCc
Confidence 122 33432 1 2256788996 34667777888888889998 99999998864
No 36
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=96.43 E-value=0.019 Score=54.55 Aligned_cols=108 Identities=16% Similarity=0.201 Sum_probs=59.3
Q ss_pred hhcccceeccccCCC-CCCccceeec-CcccccceeeccccccccCCChhhHHHHHHHHhcCCcEEecCCCCCCHHHHHh
Q 025657 45 AFSRILFRPRILRDV-SKIDMTTTVL-GFNISMPIMIAPTAFQKMAHPEGECATARAASAAGTIMTLSSWATSSVEEVSS 122 (249)
Q Consensus 45 af~~~~l~pr~l~~v-~~~d~st~ll-G~~~~~Pi~iaP~g~~~l~h~~gE~~~AraA~~~gi~~~lss~ss~sleeia~ 122 (249)
-|+++.|+|..-.=. +++|++|.|- +..+..||+.|||... .+.|++.+- |+.-|+.++- .+.+.|+.++
T Consensus 12 t~~d~~~~p~~~~~~~~~~~~~t~lt~~i~l~iPivsa~MdtV----Te~~ma~a~-a~~GGiGvI~---~n~s~e~qa~ 83 (496)
T 4fxs_A 12 TFDDVLLVPAHSTVLPNTADLRTRLTKNIALNIPMVSASMDTV----TEARLAIAL-AQEGGIGFIH---KNMSIEQQAA 83 (496)
T ss_dssp CGGGEEECCCCCCCCGGGCBCCEEEETTEEESSSEEECCCTTT----CSHHHHHHH-HHHTCEEEEC---SSSCHHHHHH
T ss_pred CcccEEEecCccccccccccccceeccccccCCCceecCcchh----hHHHHHHHH-HHcCCcceec---CCCCHHHHHH
Confidence 389999999754311 4688988876 5678999999997532 334444332 4445555553 3556655332
Q ss_pred ----c--CCCceeEEEccccChHHHHHHHHHHHHcCCcEEEEee
Q 025657 123 ----T--GPGIRFFQLYVTKHRNVDAQLVKRAERAGFKAIALTV 160 (249)
Q Consensus 123 ----~--~~~~~wfQlY~~~d~~~~~~li~rA~~aG~~alvvTv 160 (249)
. ......-.+.......-..+.++...+.++..+.|+=
T Consensus 84 ~V~~Vk~~~~~m~~d~v~v~~~~tv~ea~~~m~~~~~s~~PVvd 127 (496)
T 4fxs_A 84 QVHQVKIFEAGVVTHPVTVRPEQTIADVMELTHYHGFAGFPVVT 127 (496)
T ss_dssp HHHHHHHCCC--CBCCCCBCSSSBHHHHHHHHTSSCCCEEEEEC
T ss_pred HHHhccccccccccCceEECCCCCHHHHHHHHHHcCCcEEEEEc
Confidence 1 1100001111112233344555666667777776653
No 37
>1ofd_A Ferredoxin-dependent glutamate synthase 2; oxidoreductase, complex enzyme, substrate channeling, amidotransferase, flavoprotein, iron-sulphur; HET: FMN AKG; 2.00A {Synechocystis SP} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 1llz_A* 1lm1_A* 1llw_A* 1ofe_A*
Probab=96.31 E-value=0.023 Score=60.42 Aligned_cols=69 Identities=12% Similarity=0.043 Sum_probs=49.2
Q ss_pred hhcccceeccccCCC--CCCccceeecCcccccceeeccccccccCCChhhHHHHHHHHhcCCcEEecCCCCCCHHHH
Q 025657 45 AFSRILFRPRILRDV--SKIDMTTTVLGFNISMPIMIAPTAFQKMAHPEGECATARAASAAGTIMTLSSWATSSVEEV 120 (249)
Q Consensus 45 af~~~~l~pr~l~~v--~~~d~st~llG~~~~~Pi~iaP~g~~~l~h~~gE~~~AraA~~~gi~~~lss~ss~sleei 120 (249)
.|+++.+.+..+..+ +++|+++ .+..||+++||++..+ .++...++|.||.++|+.+.++..+. +.|..
T Consensus 841 ~~r~l~~~~~~~~~i~~~ev~~~~-----~I~~Pfii~aMS~Gsl-S~ea~~aLA~Aas~aGg~~~tGeGg~-~pe~~ 911 (1520)
T 1ofd_A 841 ALRDLLDFNADQPAISLEEVESVE-----SIVKRFCTGGMSLGAL-SREAHETLAIAMNRLGAKSNSGEGGE-DVVRY 911 (1520)
T ss_dssp SGGGGEEECCSSCCCCGGGSCCHH-----HHHTTEECCCBCTTTS-CHHHHHHHHHHHHHHTCBCEECTTCC-CGGGG
T ss_pred chhhhccccCCCCCCCchhhcccc-----cccCceEecCcCcccc-cHHHHHHHHHHHHHcCCceEeCCCCC-CHHHH
Confidence 455666555555443 3555544 6799999999997654 45677899999999999999997644 44444
No 38
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=95.44 E-value=0.015 Score=55.20 Aligned_cols=34 Identities=18% Similarity=0.275 Sum_probs=31.5
Q ss_pred CHHHHHHHHHhC-CCCEEEEccCCHHHHHHHhhCC
Q 025657 216 NWKDVKWLQTIT-SLPILVKGVLTAEDGSKLLSKE 249 (249)
Q Consensus 216 tW~dl~wlr~~~-~lPivlKGIl~~eDA~~A~~~~ 249 (249)
.|+.++++|+.+ +.||++|+|.++++|+++.++|
T Consensus 283 ~~~~i~~i~~~~~~~pvi~~~v~t~~~a~~l~~aG 317 (514)
T 1jcn_A 283 QIAMVHYIKQKYPHLQVIGGNVVTAAQAKNLIDAG 317 (514)
T ss_dssp HHHHHHHHHHHCTTCEEEEEEECSHHHHHHHHHHT
T ss_pred HHHHHHHHHHhCCCCceEecccchHHHHHHHHHcC
Confidence 478899999999 8999999999999999999887
No 39
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=95.42 E-value=0.021 Score=53.83 Aligned_cols=34 Identities=18% Similarity=0.275 Sum_probs=31.6
Q ss_pred CHHHHHHHHHhC-CCCEEEEccCCHHHHHHHhhCC
Q 025657 216 NWKDVKWLQTIT-SLPILVKGVLTAEDGSKLLSKE 249 (249)
Q Consensus 216 tW~dl~wlr~~~-~lPivlKGIl~~eDA~~A~~~~ 249 (249)
.|+.++|+|+.+ +.||++++++++|||+.+.++|
T Consensus 265 ~~e~i~~i~~~~p~~pvi~g~~~t~e~a~~l~~~G 299 (494)
T 1vrd_A 265 VIETLEMIKADYPDLPVVAGNVATPEGTEALIKAG 299 (494)
T ss_dssp HHHHHHHHHHHCTTSCEEEEEECSHHHHHHHHHTT
T ss_pred HHHHHHHHHHHCCCceEEeCCcCCHHHHHHHHHcC
Confidence 578999999999 6999999999999999999887
No 40
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=95.22 E-value=0.069 Score=47.08 Aligned_cols=150 Identities=13% Similarity=0.049 Sum_probs=82.3
Q ss_pred ccceeeccccccccCCChhhHHHHHHHHhcCCc-EEecCCCC----------CCHH---HHH----hcCCCceeEEEccc
Q 025657 74 SMPIMIAPTAFQKMAHPEGECATARAASAAGTI-MTLSSWAT----------SSVE---EVS----STGPGIRFFQLYVT 135 (249)
Q Consensus 74 ~~Pi~iaP~g~~~l~h~~gE~~~AraA~~~gi~-~~lss~ss----------~sle---eia----~~~~~~~wfQlY~~ 135 (249)
..|++++-.|. .++.-...|+.+.+.|.- ++-=+.++ .+.| ++. +...-|.+.+++..
T Consensus 93 ~~p~~~~i~g~----~~~~~~~~a~~~~~~g~d~~iein~~~P~~~g~~~~g~~~e~~~~iv~~vr~~~~~Pv~vKi~~~ 168 (311)
T 1jub_A 93 EGPIFFSIAGM----SAAENIAMLKKIQESDFSGITELNLSCPNVPGEPQLAYDFEATEKLLKEVFTFFTKPLGVKLPPY 168 (311)
T ss_dssp SSCCEEEECCS----SHHHHHHHHHHHHHSCCCSEEEEESCCCCSSSCCCGGGCHHHHHHHHHHHTTTCCSCEEEEECCC
T ss_pred CCCEEEEcCCC----CHHHHHHHHHHHHhcCCCeEEEEeccCCCCCCcccccCCHHHHHHHHHHHHHhcCCCEEEEECCC
Confidence 46776654321 233334778888888855 33212221 1222 332 22234678998876
Q ss_pred cChHHHHHHHHHHHHcCCcEEEEeecCCCCCCchhhhhc-cCCCCCccccccccccccCCCCCCCCchhhhHhhhhcCCC
Q 025657 136 KHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKN-RFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRS 214 (249)
Q Consensus 136 ~d~~~~~~li~rA~~aG~~alvvTvD~p~~g~Re~d~r~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (249)
-+.+...++.++++++|+.+|+++- +...| +.-|.+. ...++.. ....+++ +. . ..+
T Consensus 169 ~~~~~~~~~a~~~~~~G~d~i~v~~-~~~~g-~~i~~~~~~~~~~~~---~~~gG~s----------g~------~-~~~ 226 (311)
T 1jub_A 169 FDLVHFDIMAEILNQFPLTYVNSVN-SIGNG-LFIDPEAESVVIKPK---DGFGGIG----------GA------Y-IKP 226 (311)
T ss_dssp CSHHHHHHHHHHHTTSCCCEEEECC-CEEEE-ECEETTTTEESCSGG---GGEEEEE----------SG------G-GHH
T ss_pred CCHHHHHHHHHHHHHcCCcEEEecC-CCCcC-ceeccCCCCcccccC---CCCCccc----------cc------c-ccH
Confidence 6777778889999999999998741 11000 0000000 0000000 0000000 00 0 012
Q ss_pred CCHHHHHHHHHhC--CCCEEE-EccCCHHHHHHHhhCC
Q 025657 215 LNWKDVKWLQTIT--SLPILV-KGVLTAEDGSKLLSKE 249 (249)
Q Consensus 215 ~tW~dl~wlr~~~--~lPivl-KGIl~~eDA~~A~~~~ 249 (249)
.+|+.++.+++.. +.||+. =||.+++||.+++..|
T Consensus 227 ~~~~~i~~v~~~~~~~ipvi~~GGI~~~~da~~~l~~G 264 (311)
T 1jub_A 227 TALANVRAFYTRLKPEIQIIGTGGIETGQDAFEHLLCG 264 (311)
T ss_dssp HHHHHHHHHHTTSCTTSEEEEESSCCSHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhcCCCCCEEEECCCCCHHHHHHHHHcC
Confidence 4688899999998 899884 5789999999998765
No 41
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus}
Probab=94.64 E-value=0.034 Score=48.87 Aligned_cols=122 Identities=19% Similarity=0.224 Sum_probs=79.0
Q ss_pred CCcEEecCCCCCCHHHHHhcC------CCceeEEEccccChHH----HHHHHHHHHHc---CCcEEEEeecCCCCCCchh
Q 025657 104 GTIMTLSSWATSSVEEVSSTG------PGIRFFQLYVTKHRNV----DAQLVKRAERA---GFKAIALTVDTPRLGRREA 170 (249)
Q Consensus 104 gi~~~lss~ss~sleeia~~~------~~~~wfQlY~~~d~~~----~~~li~rA~~a---G~~alvvTvD~p~~g~Re~ 170 (249)
++....-+.+..+.||..... -+..|+.|-+..|+.. ..+.+++|+.. ||+.+-++.|.+...+|-.
T Consensus 63 ~~~~lpntaG~~taeeAv~~a~lare~~gt~~iKlEvi~d~~~l~pD~~~tv~aa~~L~k~Gf~Vlpy~~~D~~~ak~l~ 142 (268)
T 2htm_A 63 GVRLLPNTAGARTAEEAVRLARLGRLLTGERWVKLEVIPDPTYLLPDPLETLKAAERLIEEDFLVLPYMGPDLVLAKRLA 142 (268)
T ss_dssp TSEEEEBCTTCCSHHHHHHHHHHHHHHHCCSEEBCCCCSCTTTTCCCHHHHHHHHHHHHHTTCEECCEECSCHHHHHHHH
T ss_pred hhhccCcccCCCCHHHHHHHHHhhhHhcCcceeeeeeccCccccCcCHHHHHHHHHHHHHCCCEEeeccCCCHHHHHHHH
Confidence 666666666667777764321 2557988877665542 33677888876 9999977778877766666
Q ss_pred hhhccCCCCCccccccccccccCCCCCCCCchhhhHhhhhcCCCCCHHHHHHHHH-hCC-CCEEEE-ccCCHHHHHHHhh
Q 025657 171 DIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQT-ITS-LPILVK-GVLTAEDGSKLLS 247 (249)
Q Consensus 171 d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tW~dl~wlr~-~~~-lPivlK-GIl~~eDA~~A~~ 247 (249)
++.-...+|. +-..+ .+. +-.+.+-|+.+++ ..+ .|||+= ||-+|+||.+|.+
T Consensus 143 ~~G~~aVmPl--------g~pIG-----sG~-----------Gi~~~~~L~~i~~~~~~~vPVI~~GGI~tpsDAa~Ame 198 (268)
T 2htm_A 143 ALGTATVMPL--------AAPIG-----SGW-----------GVRTRALLELFAREKASLPPVVVDAGLGLPSHAAEVME 198 (268)
T ss_dssp HHTCSCBEEB--------SSSTT-----TCC-----------CSTTHHHHHHHHHTTTTSSCBEEESCCCSHHHHHHHHH
T ss_pred hcCCCEEEec--------CccCc-----CCc-----------ccCCHHHHHHHHHhcCCCCeEEEeCCCCCHHHHHHHHH
Confidence 6432222220 00000 000 1124667899999 677 999875 6999999999999
Q ss_pred CC
Q 025657 248 KE 249 (249)
Q Consensus 248 ~~ 249 (249)
.|
T Consensus 199 LG 200 (268)
T 2htm_A 199 LG 200 (268)
T ss_dssp TT
T ss_pred cC
Confidence 87
No 42
>3tjx_A Dihydroorotate dehydrogenase; PYRD, dhodh, lmdhodh, oxidored mutation H174A; HET: FMN; 1.64A {Leishmania major} PDB: 3gz3_A* 3gye_A* 3tro_A*
Probab=94.61 E-value=0.063 Score=48.52 Aligned_cols=44 Identities=14% Similarity=0.116 Sum_probs=30.6
Q ss_pred CCCCccceeecCcccccceeeccccccccCCChhhHHHHHHHHhcCCcEE
Q 025657 59 VSKIDMTTTVLGFNISMPIMIAPTAFQKMAHPEGECATARAASAAGTIMT 108 (249)
Q Consensus 59 v~~~d~st~llG~~~~~Pi~iaP~g~~~l~h~~gE~~~AraA~~~gi~~~ 108 (249)
-.+.|++|++||.+|..||++|+ +.+..++|. .++..+.|..++
T Consensus 32 ~~~~~L~v~~~Gl~f~NPvglAa----G~~~~~~e~--~~~l~~~G~G~v 75 (354)
T 3tjx_A 32 RGSMSLQVNLLNNTFANPFMNAA----GVMCTTTEE--LVAMTESASGSL 75 (354)
T ss_dssp -CCCCCCEEETTEEESSSEEECT----TSSCSSHHH--HHHHHHSSCSCE
T ss_pred CCCCceeEEECCEEcCCCcEEcc----CCCCCCHHH--HHHHHHcCCCEE
Confidence 35789999999999999999985 323566665 444455555443
No 43
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=94.37 E-value=0.1 Score=47.80 Aligned_cols=97 Identities=18% Similarity=0.212 Sum_probs=61.2
Q ss_pred CceeEEEccccChHHHHHHHHHHHHcCCcEEEEeecCCCCCCchhhhhccCCCCCccccccccccccCCCCCCCCchhhh
Q 025657 126 GIRFFQLYVTKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLAS 205 (249)
Q Consensus 126 ~~~wfQlY~~~d~~~~~~li~rA~~aG~~alvvTvD~p~~g~Re~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (249)
-|.+..+-+.-+.+.+.++.+.++++|+.+|+++==+. + |.. ...|. ..+..+ +.++.
T Consensus 221 ~Pv~vKi~p~~~~~~~~~ia~~~~~aGadgi~v~ntt~--~-r~~-----~~~~~---~~~~~g---------GlSG~-- 278 (367)
T 3zwt_A 221 PAVLVKIAPDLTSQDKEDIASVVKELGIDGLIVTNTTV--S-RPA-----GLQGA---LRSETG---------GLSGK-- 278 (367)
T ss_dssp CEEEEEECSCCCHHHHHHHHHHHHHHTCCEEEECCCBS--C-CCT-----TCCCT---TTTSSS---------EEEEG--
T ss_pred ceEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCc--c-ccc-----ccccc---cccccC---------CcCCc--
Confidence 35688887666777788899999999999998762211 1 110 00010 000000 00000
Q ss_pred HhhhhcCCCCCHHHHHHHHHhC--CCCEEE-EccCCHHHHHHHhhCC
Q 025657 206 YVANQIDRSLNWKDVKWLQTIT--SLPILV-KGVLTAEDGSKLLSKE 249 (249)
Q Consensus 206 ~~~~~~~~~~tW~dl~wlr~~~--~lPivl-KGIl~~eDA~~A~~~~ 249 (249)
...+.+|+.++.+++.. +.|||. =||.+++||.+++++|
T Consensus 279 -----~i~p~a~~~v~~i~~~v~~~ipvI~~GGI~s~~da~~~l~~G 320 (367)
T 3zwt_A 279 -----PLRDLSTQTIREMYALTQGRVPIIGVGGVSSGQDALEKIRAG 320 (367)
T ss_dssp -----GGHHHHHHHHHHHHHHTTTCSCEEEESSCCSHHHHHHHHHHT
T ss_pred -----ccchhHHHHHHHHHHHcCCCceEEEECCCCCHHHHHHHHHcC
Confidence 01134788999999999 789986 5799999999999876
No 44
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=94.37 E-value=0.36 Score=40.84 Aligned_cols=80 Identities=15% Similarity=0.229 Sum_probs=55.7
Q ss_pred HhcCCCceeEEEc---cccChHHHHHHHHHHHHcCCcEEEEeecCCCCCCchhhhhccCCCCCccccccccccccCCCCC
Q 025657 121 SSTGPGIRFFQLY---VTKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDK 197 (249)
Q Consensus 121 a~~~~~~~wfQlY---~~~d~~~~~~li~rA~~aG~~alvvTvD~p~~g~Re~d~r~~~~~p~~~~~~~~~~~~~~~~~~ 197 (249)
.++.+ +.+.++. ..-+.+...++.+.++++|+..| -+.+ +|. +
T Consensus 112 ~~a~~-pv~vKvi~e~~~l~~~~~~~~a~~a~eaGad~I--~tst------------g~~-~------------------ 157 (225)
T 1mzh_A 112 FRETP-SAVHKVIVETPYLNEEEIKKAVEICIEAGADFI--KTST------------GFA-P------------------ 157 (225)
T ss_dssp HHTCT-TSEEEEECCGGGCCHHHHHHHHHHHHHHTCSEE--ECCC------------SCS-S------------------
T ss_pred HHHhc-CceEEEEEeCCCCCHHHHHHHHHHHHHhCCCEE--EECC------------CCC-C------------------
Confidence 33344 5677772 22355567788899999999998 1111 111 0
Q ss_pred CCCchhhhHhhhhcCCCCCHHHHHHHHHhC--CCCEEEEc-cCCHHHHHHHhhCC
Q 025657 198 TDDSGLASYVANQIDRSLNWKDVKWLQTIT--SLPILVKG-VLTAEDGSKLLSKE 249 (249)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~tW~dl~wlr~~~--~lPivlKG-Il~~eDA~~A~~~~ 249 (249)
+..+|++++.+++.. +.||+.=| |.+++||...+++|
T Consensus 158 ---------------gga~~~~i~~v~~~v~~~ipVia~GGI~t~~da~~~l~aG 197 (225)
T 1mzh_A 158 ---------------RGTTLEEVRLIKSSAKGRIKVKASGGIRDLETAISMIEAG 197 (225)
T ss_dssp ---------------SCCCHHHHHHHHHHHTTSSEEEEESSCCSHHHHHHHHHTT
T ss_pred ---------------CCCCHHHHHHHHHHhCCCCcEEEECCCCCHHHHHHHHHhC
Confidence 135899999999987 57777665 99999999999876
No 45
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=94.10 E-value=0.21 Score=42.39 Aligned_cols=35 Identities=17% Similarity=0.338 Sum_probs=31.5
Q ss_pred CCHHHHHHHHHhCCCCEEEE-ccCCHHHHHHHhhCC
Q 025657 215 LNWKDVKWLQTITSLPILVK-GVLTAEDGSKLLSKE 249 (249)
Q Consensus 215 ~tW~dl~wlr~~~~lPivlK-GIl~~eDA~~A~~~~ 249 (249)
.+|+.++.+++.++.||++. ||.++||++++++.|
T Consensus 66 ~~~~~i~~i~~~~~ipvi~~Ggi~~~~~~~~~l~~G 101 (247)
T 3tdn_A 66 YDTEMIRFVRPLTTLPIIASGGAGKMEHFLEAFLRG 101 (247)
T ss_dssp CCHHHHHHHGGGCCSCEEEESCCCSHHHHHHHHHTT
T ss_pred ccHHHHHHHHHhCCCCEEEeCCCCCHHHHHHHHHcC
Confidence 46788999999999999999 799999999998876
No 46
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=93.82 E-value=0.13 Score=48.36 Aligned_cols=34 Identities=12% Similarity=0.166 Sum_probs=31.8
Q ss_pred CHHHHHHHHHhC-CCCEEEEccCCHHHHHHHhhCC
Q 025657 216 NWKDVKWLQTIT-SLPILVKGVLTAEDGSKLLSKE 249 (249)
Q Consensus 216 tW~dl~wlr~~~-~lPivlKGIl~~eDA~~A~~~~ 249 (249)
.|+.++++++.+ ++|++.+||.+.++|+.|+++|
T Consensus 261 ~~~~i~~l~~~~p~~pvi~G~v~t~~~a~~~~~~G 295 (491)
T 1zfj_A 261 VLRKIAEIRAHFPNRTLIAGNIATAEGARALYDAG 295 (491)
T ss_dssp HHHHHHHHHHHCSSSCEEEEEECSHHHHHHHHHTT
T ss_pred HHHHHHHHHHHCCCCcEeCCCccCHHHHHHHHHcC
Confidence 578899999999 8999999999999999999887
No 47
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=93.29 E-value=0.39 Score=40.55 Aligned_cols=35 Identities=9% Similarity=0.170 Sum_probs=30.6
Q ss_pred CCHHHHHHHHHhCCCCEEEE-ccCCHHHHHHHhhCC
Q 025657 215 LNWKDVKWLQTITSLPILVK-GVLTAEDGSKLLSKE 249 (249)
Q Consensus 215 ~tW~dl~wlr~~~~lPivlK-GIl~~eDA~~A~~~~ 249 (249)
.+|+.++++++..+.|++.= ||.++||+..+.+.|
T Consensus 183 ~~~~~i~~l~~~~~ipvia~GGI~~~~d~~~~~~~G 218 (252)
T 1ka9_F 183 YDLRLTRMVAEAVGVPVIASGGAGRMEHFLEAFQAG 218 (252)
T ss_dssp CCHHHHHHHHHHCSSCEEEESCCCSHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHcCCCEEEeCCCCCHHHHHHHHHCC
Confidence 36999999999999999986 488999999988765
No 48
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=92.99 E-value=0.18 Score=44.49 Aligned_cols=103 Identities=13% Similarity=-0.006 Sum_probs=60.8
Q ss_pred CCceeEEEccccChHHHHHHHHHHHHcC-CcEEEEeecCCCCCCchhhhh-ccCCCCCccccccccccccCCCCCCCCch
Q 025657 125 PGIRFFQLYVTKHRNVDAQLVKRAERAG-FKAIALTVDTPRLGRREADIK-NRFVLPPHLTLKNYEGLYIGKMDKTDDSG 202 (249)
Q Consensus 125 ~~~~wfQlY~~~d~~~~~~li~rA~~aG-~~alvvTvD~p~~g~Re~d~r-~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 202 (249)
.-|.+..++..-+.+...++.++++++| +.+|.++-=+ ..+.. -|.+ ....++.. ....+.+ +
T Consensus 160 ~~Pv~vK~~~~~~~~~~~~~a~~~~~aG~~d~i~v~~~~-~~~~~-i~~~~~~~~~~~~---~~~gG~s----------g 224 (314)
T 2e6f_A 160 GLPFGVKMPPYFDIAHFDTAAAVLNEFPLVKFVTCVNSV-GNGLV-IDAESESVVIKPK---QGFGGLG----------G 224 (314)
T ss_dssp CSCEEEEECCCCCHHHHHHHHHHHHTCTTEEEEEECCCE-EEEEC-EETTTTEESCCGG---GGEEEEE----------S
T ss_pred CCCEEEEECCCCCHHHHHHHHHHHHhcCCceEEEEeCCC-Ccccc-ccCCCCCcccccC---cCCCccC----------c
Confidence 3467888887667777888899999999 9988764210 00000 0000 00001100 0000000 0
Q ss_pred hhhHhhhhcCCCCCHHHHHHHHHhC-CCCEEE-EccCCHHHHHHHhhCC
Q 025657 203 LASYVANQIDRSLNWKDVKWLQTIT-SLPILV-KGVLTAEDGSKLLSKE 249 (249)
Q Consensus 203 ~~~~~~~~~~~~~tW~dl~wlr~~~-~lPivl-KGIl~~eDA~~A~~~~ 249 (249)
. . ..+.+|+.++.+++.. +.||+. =||.+++||.+++..|
T Consensus 225 ~------~-~~p~~~~~i~~v~~~~~~ipvi~~GGI~~~~da~~~l~~G 266 (314)
T 2e6f_A 225 K------Y-ILPTALANVNAFYRRCPDKLVFGCGGVYSGEDAFLHILAG 266 (314)
T ss_dssp G------G-GHHHHHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHHHT
T ss_pred c------c-ccHHHHHHHHHHHHhcCCCCEEEECCCCCHHHHHHHHHcC
Confidence 0 0 0124688999999998 899985 4688999999998765
No 49
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=92.97 E-value=0.24 Score=44.16 Aligned_cols=97 Identities=14% Similarity=0.078 Sum_probs=60.1
Q ss_pred CceeEEEccccChHHHHHHHHHHHHcCCcEEEEeecCCCCCCchhhhhccCCCCCccccccccccccCCCCCCCCchhhh
Q 025657 126 GIRFFQLYVTKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLAS 205 (249)
Q Consensus 126 ~~~wfQlY~~~d~~~~~~li~rA~~aG~~alvvTvD~p~~g~Re~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (249)
-+.+..+-..-+.+.+.++.++++++|+.+|.|+-=+. .|+ +.+. ++. . ....++ .+..
T Consensus 212 ~Pv~vKi~~~~~~~~~~~~a~~l~~~Gvd~i~vsn~~~---~~~-~~~~----~~~-~-~~~gg~----------~g~~- 270 (336)
T 1f76_A 212 VPIAVKIAPDLSEEELIQVADSLVRHNIDGVIATNTTL---DRS-LVQG----MKN-C-DQTGGL----------SGRP- 270 (336)
T ss_dssp CCEEEECCSCCCHHHHHHHHHHHHHTTCSEEEECCCBC---CCT-TSTT----STT-T-TCSSEE----------EEGG-
T ss_pred CceEEEecCCCCHHHHHHHHHHHHHcCCcEEEEeCCcc---ccc-cccc----ccc-c-ccCCCc----------CCch-
Confidence 46788876544556678889999999999998873211 111 1110 100 0 000000 0000
Q ss_pred HhhhhcCCCCCHHHHHHHHHhC--CCCEEEE-ccCCHHHHHHHhhCC
Q 025657 206 YVANQIDRSLNWKDVKWLQTIT--SLPILVK-GVLTAEDGSKLLSKE 249 (249)
Q Consensus 206 ~~~~~~~~~~tW~dl~wlr~~~--~lPivlK-GIl~~eDA~~A~~~~ 249 (249)
..+.+|+.++.+++.. +.||+.= ||.+++||.++++.|
T Consensus 271 ------~~~~~~~~i~~i~~~~~~~ipVi~~GGI~~~~da~~~l~~G 311 (336)
T 1f76_A 271 ------LQLKSTEIIRRLSLELNGRLPIIGVGGIDSVIAAREKIAAG 311 (336)
T ss_dssp ------GHHHHHHHHHHHHHHHTTSSCEEEESSCCSHHHHHHHHHHT
T ss_pred ------hHHHHHHHHHHHHHHhCCCCCEEEECCCCCHHHHHHHHHCC
Confidence 0123578899999988 7899865 699999999999876
No 50
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=92.91 E-value=0.76 Score=41.12 Aligned_cols=119 Identities=16% Similarity=0.120 Sum_probs=71.6
Q ss_pred ChhhHHHHHHHHhcC--CcEEecC--CCCC--C---HHHHHhcCCCceeEEEccccChHHHHHHHHHHHHcCCcEEEEee
Q 025657 90 PEGECATARAASAAG--TIMTLSS--WATS--S---VEEVSSTGPGIRFFQLYVTKHRNVDAQLVKRAERAGFKAIALTV 160 (249)
Q Consensus 90 ~~gE~~~AraA~~~g--i~~~lss--~ss~--s---leeia~~~~~~~wfQlY~~~d~~~~~~li~rA~~aG~~alvvTv 160 (249)
...+...++.+.+.| ..++.-+ .+.. . +++|.+..+.+..+--. -.+.+..++|+++|+++|++.-
T Consensus 104 ~~~~~~~a~~~~~~g~~~~~i~i~~~~G~~~~~~~~i~~lr~~~~~~~vi~G~-----v~s~e~A~~a~~aGad~Ivvs~ 178 (336)
T 1ypf_A 104 KEDEYEFVQQLAAEHLTPEYITIDIAHGHSNAVINMIQHIKKHLPESFVIAGN-----VGTPEAVRELENAGADATKVGI 178 (336)
T ss_dssp SHHHHHHHHHHHHTTCCCSEEEEECSSCCSHHHHHHHHHHHHHCTTSEEEEEE-----ECSHHHHHHHHHHTCSEEEECS
T ss_pred CHHHHHHHHHHHhcCCCCCEEEEECCCCCcHHHHHHHHHHHHhCCCCEEEECC-----cCCHHHHHHHHHcCCCEEEEec
Confidence 344667788888888 5553211 1111 1 44445555544444211 1223667889999999999832
Q ss_pred cCCCCCCchhhhhccCCCCCccccccccccccCCCCCCCCchhhhHhhhhcCCCCCHHHHHHHHHhCCCCEEEE-ccCCH
Q 025657 161 DTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVK-GVLTA 239 (249)
Q Consensus 161 D~p~~g~Re~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tW~dl~wlr~~~~lPivlK-GIl~~ 239 (249)
.|.|..+-+. ....-.|.++|+-|.++++..+.|||.= ||.++
T Consensus 179 ----hgG~~~~~~~--------------------------------~~~~g~~g~~~~~l~~v~~~~~ipVIa~GGI~~g 222 (336)
T 1ypf_A 179 ----GPGKVCITKI--------------------------------KTGFGTGGWQLAALRWCAKAASKPIIADGGIRTN 222 (336)
T ss_dssp ----SCSTTCHHHH--------------------------------HHSCSSTTCHHHHHHHHHHTCSSCEEEESCCCST
T ss_pred ----CCCceeeccc--------------------------------ccCcCCchhHHHHHHHHHHHcCCcEEEeCCCCCH
Confidence 2222111110 0000113457889999999999999884 89999
Q ss_pred HHHHHHhhCC
Q 025657 240 EDGSKLLSKE 249 (249)
Q Consensus 240 eDA~~A~~~~ 249 (249)
+|+.+|+..|
T Consensus 223 ~Dv~kalalG 232 (336)
T 1ypf_A 223 GDVAKSIRFG 232 (336)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHHHHHcC
Confidence 9999999876
No 51
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=92.89 E-value=1.1 Score=40.21 Aligned_cols=86 Identities=12% Similarity=0.221 Sum_probs=58.7
Q ss_pred cCCCceeEEEccc------cChHHHHHHHHHHHHcCCcEEEEeecCCCCCCchhhhhccCCCCCccccccccccccCCCC
Q 025657 123 TGPGIRFFQLYVT------KHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMD 196 (249)
Q Consensus 123 ~~~~~~wfQlY~~------~d~~~~~~li~rA~~aG~~alvvTvD~p~~g~Re~d~r~~~~~p~~~~~~~~~~~~~~~~~ 196 (249)
+..-+.++.|-.. .+.+...+++++.+++|+..|-|+. |. + .+... .
T Consensus 207 ~v~~pv~vRls~~~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~-----g~--------~-~~~~~--~----------- 259 (340)
T 3gr7_A 207 VWDGPLFVRISASDYHPDGLTAKDYVPYAKRMKEQGVDLVDVSS-----GA--------I-VPARM--N----------- 259 (340)
T ss_dssp HCCSCEEEEEESCCCSTTSCCGGGHHHHHHHHHHTTCCEEEEEC-----CC--------S-SCCCC--C-----------
T ss_pred hcCCceEEEeccccccCCCCCHHHHHHHHHHHHHcCCCEEEEec-----CC--------c-cCCCC--C-----------
Confidence 3344567777653 1356677899999999999876653 10 0 00000 0
Q ss_pred CCCCchhhhHhhhhcCCCCCHHHHHHHHHhCCCCEEEEc-cCCHHHHHHHhhCC
Q 025657 197 KTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKG-VLTAEDGSKLLSKE 249 (249)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~tW~dl~wlr~~~~lPivlKG-Il~~eDA~~A~~~~ 249 (249)
..+...|+-++.+|+.+++||+.=| |.++|||+.+++.|
T Consensus 260 --------------~~~~~~~~~~~~ik~~~~iPVi~~GgI~s~e~a~~~L~~G 299 (340)
T 3gr7_A 260 --------------VYPGYQVPFAELIRREADIPTGAVGLITSGWQAEEILQNG 299 (340)
T ss_dssp --------------CCTTTTHHHHHHHHHHTTCCEEEESSCCCHHHHHHHHHTT
T ss_pred --------------CCccccHHHHHHHHHHcCCcEEeeCCCCCHHHHHHHHHCC
Confidence 0134578889999999999999875 67899999999876
No 52
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=92.70 E-value=0.3 Score=46.94 Aligned_cols=75 Identities=13% Similarity=0.155 Sum_probs=55.6
Q ss_pred eeEEEccccChH----HHHHHHHHHHHcCCcEEEEeecCCCCCCchhhhhccCCCCCccccccccccccCCCCCCCCchh
Q 025657 128 RFFQLYVTKHRN----VDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGL 203 (249)
Q Consensus 128 ~wfQlY~~~d~~----~~~~li~rA~~aG~~alvvTvD~p~~g~Re~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 203 (249)
+|||+|...=++ ...+++++++++|+..|++| | +.+| |.
T Consensus 437 ~~~~v~~~Gw~~~~~~~~~e~a~~~~~~Ga~~il~t-~------~~~d---G~--------------------------- 479 (555)
T 1jvn_A 437 CWYQCTIKGGRESRDLGVWELTRACEALGAGEILLN-C------IDKD---GS--------------------------- 479 (555)
T ss_dssp EEEEEEETTTTEEEEEEHHHHHHHHHHTTCCEEEEC-C------GGGT---TT---------------------------
T ss_pred eeEEEEEecCccCCCCCHHHHHHHHHHcCCCEEEEe-C------CCCC---CC---------------------------
Confidence 489998764322 24589999999999999875 1 1111 00
Q ss_pred hhHhhhhcCCCCCHHHHHHHHHhCCCCEEEEc-cCCHHHHHHHhh
Q 025657 204 ASYVANQIDRSLNWKDVKWLQTITSLPILVKG-VLTAEDGSKLLS 247 (249)
Q Consensus 204 ~~~~~~~~~~~~tW~dl~wlr~~~~lPivlKG-Il~~eDA~~A~~ 247 (249)
. ...+|+-++.|++..+.|||.=| |.++||++++.+
T Consensus 480 -------~-~G~d~~li~~l~~~~~iPVIasGGi~s~~d~~~~~~ 516 (555)
T 1jvn_A 480 -------N-SGYDLELIEHVKDAVKIPVIASSGAGVPEHFEEAFL 516 (555)
T ss_dssp -------C-SCCCHHHHHHHHHHCSSCEEECSCCCSHHHHHHHHH
T ss_pred -------C-CCCCHHHHHHHHHhCCccEEEECCCCCHHHHHHHHH
Confidence 0 12479999999999999999955 999999999987
No 53
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=92.15 E-value=0.28 Score=41.49 Aligned_cols=34 Identities=21% Similarity=0.265 Sum_probs=30.6
Q ss_pred CHHHHHHHHHhCCCCEEEE-ccCCHHHHHHHhhCC
Q 025657 216 NWKDVKWLQTITSLPILVK-GVLTAEDGSKLLSKE 249 (249)
Q Consensus 216 tW~dl~wlr~~~~lPivlK-GIl~~eDA~~A~~~~ 249 (249)
.|+.++.+++.++.||++. ||.+++|+..++++|
T Consensus 62 ~~~~i~~i~~~~~ipvi~~ggI~~~~~~~~~~~~G 96 (253)
T 1thf_D 62 MLELVEKVAEQIDIPFTVGGGIHDFETASELILRG 96 (253)
T ss_dssp HHHHHHHHHTTCCSCEEEESSCCSHHHHHHHHHTT
T ss_pred cHHHHHHHHHhCCCCEEEeCCCCCHHHHHHHHHcC
Confidence 4678899999999999999 899999999999876
No 54
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=92.10 E-value=1.3 Score=40.33 Aligned_cols=46 Identities=22% Similarity=0.150 Sum_probs=29.9
Q ss_pred cchHHHHHHHHhhcccceeccccCCCCCCccceeecCcccccceeecc
Q 025657 34 EDQWTLQENRNAFSRILFRPRILRDVSKIDMTTTVLGFNISMPIMIAP 81 (249)
Q Consensus 34 ~de~t~~~N~~af~~~~l~pr~l~~v~~~d~st~llG~~~~~Pi~iaP 81 (249)
+-|.+.+--..+++. .+.|+. ...+.++++++++|.++..||++|.
T Consensus 22 ~pe~ah~~~~~~l~~-~~~~~~-~~~~~~~L~~~~~Gl~~~NPvglAa 67 (367)
T 3zwt_A 22 DPESAHRLAVRFTSL-GLLPRA-RFQDSDMLEVRVLGHKFRNPVGIAA 67 (367)
T ss_dssp CHHHHHHHHHHHHHT-TCC----CCCCCGGGCEEETTEEESSSEEECT
T ss_pred CHHHHHHHHHHHHHh-cccccc-ccCCCCCCcEEECCEEcCCCCEeCC
Confidence 344444445555542 344542 3356789999999999999999985
No 55
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=92.09 E-value=0.21 Score=47.25 Aligned_cols=33 Identities=18% Similarity=0.365 Sum_probs=30.2
Q ss_pred HHHHHHHHHhC-CCCEEEEccCCHHHHHHHhhCC
Q 025657 217 WKDVKWLQTIT-SLPILVKGVLTAEDGSKLLSKE 249 (249)
Q Consensus 217 W~dl~wlr~~~-~lPivlKGIl~~eDA~~A~~~~ 249 (249)
++.++++|+.+ +.||++++|.++|+|+.+.++|
T Consensus 258 ~~~v~~i~~~~p~~~Vi~g~v~t~e~a~~l~~aG 291 (490)
T 4avf_A 258 IERVRWVKQTFPDVQVIGGNIATAEAAKALAEAG 291 (490)
T ss_dssp HHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHTT
T ss_pred HHHHHHHHHHCCCceEEEeeeCcHHHHHHHHHcC
Confidence 47899999999 6799999999999999999987
No 56
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=92.07 E-value=0.21 Score=45.50 Aligned_cols=97 Identities=14% Similarity=-0.027 Sum_probs=61.4
Q ss_pred cCCCceeEEEccccChHHHHHHHHHHHHcC-CcEEEEe--------ecCCCCCCchhhhhccCCCCCccccccc-ccccc
Q 025657 123 TGPGIRFFQLYVTKHRNVDAQLVKRAERAG-FKAIALT--------VDTPRLGRREADIKNRFVLPPHLTLKNY-EGLYI 192 (249)
Q Consensus 123 ~~~~~~wfQlY~~~d~~~~~~li~rA~~aG-~~alvvT--------vD~p~~g~Re~d~r~~~~~p~~~~~~~~-~~~~~ 192 (249)
+..-|.+.++-+.-|.+...++++.++++| +.+|+++ +|.- +++. .+. .++. .+++
T Consensus 191 ~~~~PV~vKi~p~~d~~~~~~~a~~~~~~Gg~d~I~~~NT~~~g~~idi~--~~~~-------~~~----~~~~~gGlS- 256 (354)
T 4ef8_A 191 VYPHSFGVKMPPYFDFAHFDAAAEILNEFPKVQFITCINSIGNGLVIDAE--TESV-------VIK----PKQGFGGLG- 256 (354)
T ss_dssp HCCSCEEEEECCCCSHHHHHHHHHHHHTCTTEEEEEECCCEEEEECEETT--TTEE-------SCS----GGGGEEEEE-
T ss_pred hhCCCeEEEecCCCCHHHHHHHHHHHHhCCCccEEEEecccCcceeeecc--CCcc-------ccc----cccccCCCC-
Confidence 344578999887767777777788888998 9998763 3421 1100 000 0000 0110
Q ss_pred CCCCCCCCchhhhHhhhhcCCCCCHHHHHHHHHhC-CCCEEEE-ccCCHHHHHHHhhCC
Q 025657 193 GKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTIT-SLPILVK-GVLTAEDGSKLLSKE 249 (249)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~tW~dl~wlr~~~-~lPivlK-GIl~~eDA~~A~~~~ 249 (249)
+. .-.+.+|+-|..+++.. +.|||.= ||.+++||.+++++|
T Consensus 257 ---------G~-------~i~p~a~~~i~~v~~~~~~ipII~~GGI~s~~da~~~l~aG 299 (354)
T 4ef8_A 257 ---------GR-------YVLPTALANINAFYRRCPGKLIFGCGGVYTGEDAFLHVLAG 299 (354)
T ss_dssp ---------GG-------GGHHHHHHHHHHHHHHCTTSEEEEESCCCSHHHHHHHHHHT
T ss_pred ---------CC-------CCchHHHHHHHHHHHhCCCCCEEEECCcCCHHHHHHHHHcC
Confidence 00 00145789999999985 6899854 899999999998876
No 57
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=91.92 E-value=0.29 Score=47.02 Aligned_cols=110 Identities=15% Similarity=0.204 Sum_probs=50.5
Q ss_pred hhcccceeccccC-CCCCCccceeec-CcccccceeeccccccccCCChhhHHHHHHHHhcCCcEEecCCCCCCHHHHHh
Q 025657 45 AFSRILFRPRILR-DVSKIDMTTTVL-GFNISMPIMIAPTAFQKMAHPEGECATARAASAAGTIMTLSSWATSSVEEVSS 122 (249)
Q Consensus 45 af~~~~l~pr~l~-~v~~~d~st~ll-G~~~~~Pi~iaP~g~~~l~h~~gE~~~AraA~~~gi~~~lss~ss~sleeia~ 122 (249)
-|+++.|+|..-. ..+++|++|.|- +.++..||+-|||--. -|..+|.+-++.|=.-++ .-+.|+|+-++
T Consensus 61 TfDDVlLvP~~s~v~p~~Vdl~t~lt~~i~L~iPlvSA~MDTV------Te~~MAIamAr~GGiGvI--H~n~sie~Qa~ 132 (556)
T 4af0_A 61 TYNDFLVLPGHINFPASDVSLQSKATKNIVLNTPFLSSPMDTV------TEDRMAIALALHGGLGII--HHNCSAEEQAA 132 (556)
T ss_dssp CGGGEEECCCCCCSCGGGCCCCEEEETTEEESSCEEECCCTTT------CSHHHHHHHHHTTCEEEE--CCSSCHHHHHH
T ss_pred ChhhEEEccCCCCCCcccceeeeeccCCcEeCCCEEecCcccc------cCHHHHHHHHHCCCeEEE--cCCCCHHHHHH
Confidence 5999999997532 125789999884 7889999999995432 266677776666655555 34678887653
Q ss_pred cC----C-CceeEE-EccccChHHHHHHHHHHHHcCCcEEEEeecC
Q 025657 123 TG----P-GIRFFQ-LYVTKHRNVDAQLVKRAERAGFKAIALTVDT 162 (249)
Q Consensus 123 ~~----~-~~~wfQ-lY~~~d~~~~~~li~rA~~aG~~alvvTvD~ 162 (249)
.- . ...|.. ........-+.+.++--++-|+..+.||-|.
T Consensus 133 ~V~~VKr~e~g~i~dPvtl~P~~Tv~da~~l~~~~~isgvpVvd~g 178 (556)
T 4af0_A 133 MVRRVKKYENGFITDPLCLGPDATVGDVLEIKAKFGFCGVPITETG 178 (556)
T ss_dssp HHHHHHHCCC------------------------------------
T ss_pred HHHHHHhcccCccCCCeEcCCCCCHHHHHHHHHHhCCCcccccccc
Confidence 21 0 111221 1112233344466666677888888888763
No 58
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=91.45 E-value=0.93 Score=42.45 Aligned_cols=95 Identities=18% Similarity=0.254 Sum_probs=61.5
Q ss_pred Cc-eeEEEccccChHHHHHHHHHHHHcCCcEEEEeecCCCCCCchhhhhccCCCCCccccccccccccCCCCCCCCchhh
Q 025657 126 GI-RFFQLYVTKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLA 204 (249)
Q Consensus 126 ~~-~wfQlY~~~d~~~~~~li~rA~~aG~~alvvTvD~p~~g~Re~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (249)
-| .+.++-+.-+.+...++.+.++++|+.+|+++-=+. .|. |+.. + .+. ..+.++..
T Consensus 297 ~P~V~vKispd~~~ed~~~iA~~~~~aGaDgI~v~ntt~---~~~-d~~~-~--------~~~---------~GGlSG~~ 354 (443)
T 1tv5_A 297 KPLVFVKLAPDLNQEQKKEIADVLLETNIDGMIISNTTT---QIN-DIKS-F--------ENK---------KGGVSGAK 354 (443)
T ss_dssp CCEEEEEECSCCCHHHHHHHHHHHHHTTCSEEEECCCBS---CCC-CCGG-G--------TTC---------CSEEEEHH
T ss_pred CCeEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEECCCc---ccc-cccc-c--------ccc---------cCCcCCCc
Confidence 35 688887655666778899999999999998874332 111 1110 0 000 00000110
Q ss_pred hHhhhhcCCCCCHHHHHHHHHhC--CCCEEE-EccCCHHHHHHHhhCC
Q 025657 205 SYVANQIDRSLNWKDVKWLQTIT--SLPILV-KGVLTAEDGSKLLSKE 249 (249)
Q Consensus 205 ~~~~~~~~~~~tW~dl~wlr~~~--~lPivl-KGIl~~eDA~~A~~~~ 249 (249)
. .+.+|+-++.+++.. +.|||. =||.+++||.+++++|
T Consensus 355 ~-------~~~sl~~i~~v~~~v~~~iPVIg~GGI~s~~DA~e~l~aG 395 (443)
T 1tv5_A 355 L-------KDISTKFICEMYNYTNKQIPIIASGGIFSGLDALEKIEAG 395 (443)
T ss_dssp H-------HHHHHHHHHHHHHHTTTCSCEEEESSCCSHHHHHHHHHTT
T ss_pred c-------hHHHHHHHHHHHHHcCCCCcEEEECCCCCHHHHHHHHHcC
Confidence 0 023578899999998 899984 5899999999999887
No 59
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=91.37 E-value=0.19 Score=47.66 Aligned_cols=34 Identities=9% Similarity=0.149 Sum_probs=30.9
Q ss_pred CHHHHHHHHHhC-C-CCEEEEccCCHHHHHHHhhCC
Q 025657 216 NWKDVKWLQTIT-S-LPILVKGVLTAEDGSKLLSKE 249 (249)
Q Consensus 216 tW~dl~wlr~~~-~-lPivlKGIl~~eDA~~A~~~~ 249 (249)
.|+.++||++.+ + .|+++++|.++|+|+.++++|
T Consensus 270 ~~~~i~~lk~~~~~~~~Vi~G~V~t~~~a~~l~~aG 305 (503)
T 1me8_A 270 QKITIGWIREKYGDKVKVGAGNIVDGEGFRYLADAG 305 (503)
T ss_dssp HHHHHHHHHHHHGGGSCEEEEEECSHHHHHHHHHHT
T ss_pred hhhHHHHHHHhCCCCceEeeccccCHHHHHHHHHhC
Confidence 468899999998 4 899999999999999999876
No 60
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=91.05 E-value=2 Score=38.29 Aligned_cols=85 Identities=8% Similarity=0.060 Sum_probs=58.1
Q ss_pred CCCceeEEEccc------cChHHHHHHHHHHHHcCCcEEEEeecCCCCCCchhhhhccCCCCCccccccccccccCCCCC
Q 025657 124 GPGIRFFQLYVT------KHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDK 197 (249)
Q Consensus 124 ~~~~~wfQlY~~------~d~~~~~~li~rA~~aG~~alvvTvD~p~~g~Re~d~r~~~~~p~~~~~~~~~~~~~~~~~~ 197 (249)
..-+.++.+-.. -+.+...+++++++++|+..|-|+-=+ .. ... .|
T Consensus 208 v~~pv~vris~~~~~~~g~~~~~~~~~a~~l~~~Gvd~i~v~~~~-----~~---~~~--~~------------------ 259 (338)
T 1z41_A 208 WDGPLFVRVSASDYTDKGLDIADHIGFAKWMKEQGVDLIDCSSGA-----LV---HAD--IN------------------ 259 (338)
T ss_dssp CCSCEEEEEECCCCSTTSCCHHHHHHHHHHHHHTTCCEEEEECCC-----SS---CCC--CC------------------
T ss_pred cCCcEEEEecCcccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCc-----cc---cCC--CC------------------
Confidence 344567777542 245567789999999999988775311 00 000 00
Q ss_pred CCCchhhhHhhhhcCCCCCHHHHHHHHHhCCCCEEEEc-cCCHHHHHHHhhCC
Q 025657 198 TDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKG-VLTAEDGSKLLSKE 249 (249)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~tW~dl~wlr~~~~lPivlKG-Il~~eDA~~A~~~~ 249 (249)
..+...|+-++.+|+.+++||+.=| |.+++||..+++.|
T Consensus 260 -------------~~~~~~~~~~~~ir~~~~iPVi~~Ggi~s~~~a~~~l~~G 299 (338)
T 1z41_A 260 -------------VFPGYQVSFAEKIREQADMATGAVGMITDGSMAEEILQNG 299 (338)
T ss_dssp -------------CCTTTTHHHHHHHHHHHCCEEEECSSCCSHHHHHHHHHTT
T ss_pred -------------CCccchHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHcC
Confidence 0123568889999999999999865 66999999999876
No 61
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=90.70 E-value=0.95 Score=38.47 Aligned_cols=35 Identities=17% Similarity=0.308 Sum_probs=30.3
Q ss_pred CCHHHHHHHHHhCCCCEEEEc-cCCHHHHHHHhhCC
Q 025657 215 LNWKDVKWLQTITSLPILVKG-VLTAEDGSKLLSKE 249 (249)
Q Consensus 215 ~tW~dl~wlr~~~~lPivlKG-Il~~eDA~~A~~~~ 249 (249)
.+|+.++++++..+.|++.=| |.++||+..+.++|
T Consensus 187 ~~~~~i~~l~~~~~ipvia~GGI~~~ed~~~~~~~G 222 (266)
T 2w6r_A 187 YDTEMIRFVRPLTTLPIIASGGAGKMEHFLEAFLAG 222 (266)
T ss_dssp CCHHHHHHHGGGCCSCEEEESCCCSHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHcCCCEEEeCCCCCHHHHHHHHHcC
Confidence 468999999999999999865 99999999988755
No 62
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=89.87 E-value=1.4 Score=36.92 Aligned_cols=32 Identities=9% Similarity=0.057 Sum_probs=29.0
Q ss_pred HHHHHHHHhCCCCEEEE-ccCCHHHHHHHhhCC
Q 025657 218 KDVKWLQTITSLPILVK-GVLTAEDGSKLLSKE 249 (249)
Q Consensus 218 ~dl~wlr~~~~lPivlK-GIl~~eDA~~A~~~~ 249 (249)
+.++.+++.++.||+++ ||-+++++..++++|
T Consensus 64 ~~i~~i~~~~~ipv~v~ggi~~~~~~~~~l~~G 96 (244)
T 2y88_A 64 ELLAEVVGKLDVQVELSGGIRDDESLAAALATG 96 (244)
T ss_dssp HHHHHHHHHCSSEEEEESSCCSHHHHHHHHHTT
T ss_pred HHHHHHHHhcCCcEEEECCCCCHHHHHHHHHcC
Confidence 67899999999999998 788999999998876
No 63
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=89.78 E-value=0.9 Score=38.19 Aligned_cols=34 Identities=9% Similarity=0.097 Sum_probs=30.4
Q ss_pred CCHHHHHHHHHhCCCCEEEEc-cCCHHHHHHHhhC
Q 025657 215 LNWKDVKWLQTITSLPILVKG-VLTAEDGSKLLSK 248 (249)
Q Consensus 215 ~tW~dl~wlr~~~~lPivlKG-Il~~eDA~~A~~~ 248 (249)
.+|+-++++++..+.|+|.=| |.++||++.+.+.
T Consensus 175 ~~~~~i~~l~~~~~iPvia~GGI~~~~d~~~~~~~ 209 (241)
T 1qo2_A 175 HDFSLTKKIAIEAEVKVLAAGGISSENSLKTAQKV 209 (241)
T ss_dssp CCHHHHHHHHHHHTCEEEEESSCCSHHHHHHHHHH
T ss_pred CCHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHhc
Confidence 479999999999999999865 9999999998875
No 64
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=89.69 E-value=1.8 Score=36.33 Aligned_cols=35 Identities=17% Similarity=0.308 Sum_probs=30.6
Q ss_pred CCHHHHHHHHHhCCCCEEEEc-cCCHHHHHHHhhCC
Q 025657 215 LNWKDVKWLQTITSLPILVKG-VLTAEDGSKLLSKE 249 (249)
Q Consensus 215 ~tW~dl~wlr~~~~lPivlKG-Il~~eDA~~A~~~~ 249 (249)
.+|+.++++++..+.|++.=| |-+++|+..+.++|
T Consensus 182 ~~~~~~~~l~~~~~ipvia~GGI~~~~d~~~~~~~G 217 (253)
T 1thf_D 182 YDTEMIRFVRPLTTLPIIASGGAGKMEHFLEAFLAG 217 (253)
T ss_dssp CCHHHHHHHGGGCCSCEEEESCCCSHHHHHHHHHTT
T ss_pred CCHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcC
Confidence 479999999999999999865 88899999998775
No 65
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=89.47 E-value=1.5 Score=40.71 Aligned_cols=95 Identities=18% Similarity=0.267 Sum_probs=60.7
Q ss_pred Cc-eeEEEccccChHHHHHHHHHHHHcCCcEEEEeecCCCCCCchhhhhccCCCCCccccccccccccCCCCCCCCchhh
Q 025657 126 GI-RFFQLYVTKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLA 204 (249)
Q Consensus 126 ~~-~wfQlY~~~d~~~~~~li~rA~~aG~~alvvTvD~p~~g~Re~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (249)
-| .+..+-+.-+.+...++.+.++++|+.+|+++==+. .|. |+.. + .+..+ +.++..
T Consensus 269 ~P~V~VKi~pd~~~~~i~~iA~~a~~aGaDgIiv~Ntt~---~r~-dl~~-~--------~~~~G---------GlSG~a 326 (415)
T 3i65_A 269 KPLVFVKLAPDLNQEQKKEIADVLLETNIDGMIISNTTT---QIN-DIKS-F--------ENKKG---------GVSGAK 326 (415)
T ss_dssp CCEEEEEECSCCCHHHHHHHHHHHHHHTCSEEEECCCBS---CCC-CCGG-G--------TTCCS---------EEEEGG
T ss_pred CCeEEEEecCCCCHHHHHHHHHHHHHcCCcEEEEeCCCc---ccc-cccc-c--------ccccC---------CcCCcc
Confidence 35 588987766776788999999999999997653221 111 1111 0 00000 000000
Q ss_pred hHhhhhcCCCCCHHHHHHHHHhC--CCCEEE-EccCCHHHHHHHhhCC
Q 025657 205 SYVANQIDRSLNWKDVKWLQTIT--SLPILV-KGVLTAEDGSKLLSKE 249 (249)
Q Consensus 205 ~~~~~~~~~~~tW~dl~wlr~~~--~lPivl-KGIl~~eDA~~A~~~~ 249 (249)
..+.+++-|+.+++.. +.|||. =||.+++||.+++++|
T Consensus 327 -------~~p~al~~I~~v~~~v~~~iPIIg~GGI~s~eDa~e~l~aG 367 (415)
T 3i65_A 327 -------LKDISTKFICEMYNYTNKQIPIIASGGIFSGLDALEKIEAG 367 (415)
T ss_dssp -------GHHHHHHHHHHHHHHTTTCSCEEECSSCCSHHHHHHHHHHT
T ss_pred -------chHHHHHHHHHHHHHhCCCCCEEEECCCCCHHHHHHHHHcC
Confidence 0134567788899988 689875 5899999999999876
No 66
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=89.24 E-value=3.5 Score=37.04 Aligned_cols=34 Identities=9% Similarity=0.235 Sum_probs=30.0
Q ss_pred CHHHHHHHHHhCCCCEEEEc-cCCHHHHHHHhhCC
Q 025657 216 NWKDVKWLQTITSLPILVKG-VLTAEDGSKLLSKE 249 (249)
Q Consensus 216 tW~dl~wlr~~~~lPivlKG-Il~~eDA~~A~~~~ 249 (249)
+|+-++.+++..+.||++=| |.+++|+..+++.|
T Consensus 196 ~~~~l~~i~~~~~iPViaaGGI~~~~~~~~~l~~G 230 (369)
T 3bw2_A 196 LLSLLAQVREAVDIPVVAAGGIMRGGQIAAVLAAG 230 (369)
T ss_dssp HHHHHHHHHHHCSSCEEEESSCCSHHHHHHHHHTT
T ss_pred HHHHHHHHHHhcCceEEEECCCCCHHHHHHHHHcC
Confidence 38999999999999999887 66999999998876
No 67
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=89.12 E-value=3.2 Score=37.53 Aligned_cols=34 Identities=21% Similarity=0.096 Sum_probs=30.0
Q ss_pred CHHHHHHHHHhCCCCEEEEccCCHHHHHHHhhCC
Q 025657 216 NWKDVKWLQTITSLPILVKGVLTAEDGSKLLSKE 249 (249)
Q Consensus 216 tW~dl~wlr~~~~lPivlKGIl~~eDA~~A~~~~ 249 (249)
.|+-++++|+.++.||+.=|=.+++||+.+++.|
T Consensus 282 ~~~~~~~v~~~~~iPvi~~Ggit~~~a~~~l~~g 315 (364)
T 1vyr_A 282 SEAFRQKVRERFHGVIIGAGAYTAEKAEDLIGKG 315 (364)
T ss_dssp CHHHHHHHHHHCCSEEEEESSCCHHHHHHHHHTT
T ss_pred cHHHHHHHHHHCCCCEEEECCcCHHHHHHHHHCC
Confidence 4777899999999999988766999999999875
No 68
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=89.06 E-value=0.69 Score=39.64 Aligned_cols=111 Identities=12% Similarity=-0.001 Sum_probs=62.1
Q ss_pred eEEEccccChHHHHHHHHHHHHcCCcEEEEeecCCCCCCchhhhhccCCCCCccccccccccccCCCCCCCCchhhhH-h
Q 025657 129 FFQLYVTKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASY-V 207 (249)
Q Consensus 129 wfQlY~~~d~~~~~~li~rA~~aG~~alvvTvD~p~~g~Re~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 207 (249)
-+-+....|.+...++.+.+.+.|++.|=||..+|..-.-.+.+|..|.-. .+...++...+ ........ .
T Consensus 36 vv~Vir~~~~~~a~~~a~al~~gGi~~iEvt~~t~~a~e~I~~l~~~~~~~-~iGaGTVlt~~-------~a~~Ai~AGA 107 (232)
T 4e38_A 36 VIPVIAIDNAEDIIPLGKVLAENGLPAAEITFRSDAAVEAIRLLRQAQPEM-LIGAGTILNGE-------QALAAKEAGA 107 (232)
T ss_dssp EEEEECCSSGGGHHHHHHHHHHTTCCEEEEETTSTTHHHHHHHHHHHCTTC-EEEEECCCSHH-------HHHHHHHHTC
T ss_pred EEEEEEcCCHHHHHHHHHHHHHCCCCEEEEeCCCCCHHHHHHHHHHhCCCC-EEeECCcCCHH-------HHHHHHHcCC
Confidence 333444467777778888888888888888888766433334455544100 00001110000 00000000 0
Q ss_pred hhhcCCCCCHHHHHHHHHhCCCCEEEEccCCHHHHHHHhhCC
Q 025657 208 ANQIDRSLNWKDVKWLQTITSLPILVKGVLTAEDGSKLLSKE 249 (249)
Q Consensus 208 ~~~~~~~~tW~dl~wlr~~~~lPivlKGIl~~eDA~~A~~~~ 249 (249)
.-...|.++-+-+++.++. +.|++. |++|+.|+.+|.++|
T Consensus 108 ~fIvsP~~~~~vi~~~~~~-gi~~ip-Gv~TptEi~~A~~~G 147 (232)
T 4e38_A 108 TFVVSPGFNPNTVRACQEI-GIDIVP-GVNNPSTVEAALEMG 147 (232)
T ss_dssp SEEECSSCCHHHHHHHHHH-TCEEEC-EECSHHHHHHHHHTT
T ss_pred CEEEeCCCCHHHHHHHHHc-CCCEEc-CCCCHHHHHHHHHcC
Confidence 0123456666677776664 777766 999999999999987
No 69
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=89.03 E-value=4.1 Score=36.47 Aligned_cols=83 Identities=14% Similarity=0.139 Sum_probs=56.9
Q ss_pred ceeEEEccc------cChHHHHHHHHHHHHcCCcEEEEeecCCCCCCchhhhhccCCCCCccccccccccccCCCCCCCC
Q 025657 127 IRFFQLYVT------KHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDD 200 (249)
Q Consensus 127 ~~wfQlY~~------~d~~~~~~li~rA~~aG~~alvvTvD~p~~g~Re~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~ 200 (249)
+.++.+-.. -+.+...+++++.+++|+..|-|+.-. ... ....|
T Consensus 221 pV~vRls~~~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~----~~~-----~~~~~--------------------- 270 (349)
T 3hgj_A 221 PLFVRVSATDWGEGGWSLEDTLAFARRLKELGVDLLDCSSGG----VVL-----RVRIP--------------------- 270 (349)
T ss_dssp CEEEEEESCCCSTTSCCHHHHHHHHHHHHHTTCCEEEEECCC----SCS-----SSCCC---------------------
T ss_pred eEEEEeccccccCCCCCHHHHHHHHHHHHHcCCCEEEEecCC----cCc-----ccccC---------------------
Confidence 467776542 245667789999999999988766310 000 00000
Q ss_pred chhhhHhhhhcCCCCCHHHHHHHHHhCCCCEEEEc-cCCHHHHHHHhhCC
Q 025657 201 SGLASYVANQIDRSLNWKDVKWLQTITSLPILVKG-VLTAEDGSKLLSKE 249 (249)
Q Consensus 201 ~~~~~~~~~~~~~~~tW~dl~wlr~~~~lPivlKG-Il~~eDA~~A~~~~ 249 (249)
..+...|+-++.+|+.++.||+.=| |.+++||+.+++.|
T Consensus 271 ----------~~~~~~~~~~~~ir~~~~iPVi~~Ggi~t~e~a~~~l~~G 310 (349)
T 3hgj_A 271 ----------LAPGFQVPFADAVRKRVGLRTGAVGLITTPEQAETLLQAG 310 (349)
T ss_dssp ----------CCTTTTHHHHHHHHHHHCCEEEECSSCCCHHHHHHHHHTT
T ss_pred ----------CCccccHHHHHHHHHHcCceEEEECCCCCHHHHHHHHHCC
Confidence 0134577889999999999999887 67999999999876
No 70
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=88.96 E-value=3.7 Score=33.70 Aligned_cols=106 Identities=13% Similarity=0.102 Sum_probs=64.4
Q ss_pred hhhHHHHHHHHhcCCcEEecCCCCCCHHHHHhcCCCceeE----------EEccccChHHHHHHHHHHHHcCCcEEEEee
Q 025657 91 EGECATARAASAAGTIMTLSSWATSSVEEVSSTGPGIRFF----------QLYVTKHRNVDAQLVKRAERAGFKAIALTV 160 (249)
Q Consensus 91 ~gE~~~AraA~~~gi~~~lss~ss~sleeia~~~~~~~wf----------QlY~~~d~~~~~~li~rA~~aG~~alvvTv 160 (249)
+--..+|+++.+.|...+.-. +..-+++|.+.... +++ .+++.++ .+.++.+.++|+..+.+..
T Consensus 23 ~~~~~~a~~~~~~Ga~~i~~~-~~~~i~~i~~~~~~-pv~~~~~~~~~~~~~~i~~~----~~~i~~~~~~Gad~v~l~~ 96 (223)
T 1y0e_A 23 FIMSKMALAAYEGGAVGIRAN-TKEDILAIKETVDL-PVIGIVKRDYDHSDVFITAT----SKEVDELIESQCEVIALDA 96 (223)
T ss_dssp HHHHHHHHHHHHHTCSEEEEE-SHHHHHHHHHHCCS-CEEEECBCCCTTCCCCBSCS----HHHHHHHHHHTCSEEEEEC
T ss_pred ccHHHHHHHHHHCCCeeeccC-CHHHHHHHHHhcCC-CEEeeeccCCCccccccCCc----HHHHHHHHhCCCCEEEEee
Confidence 334589999999998876432 22224445444332 222 1232222 3456777889999876654
Q ss_pred cCCCCCCchhhhhccCCCCCccccccccccccCCCCCCCCchhhhHhhhhcCCCCCH-HHHHHHHHhCCCCEEEEccCCH
Q 025657 161 DTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNW-KDVKWLQTITSLPILVKGVLTA 239 (249)
Q Consensus 161 D~p~~g~Re~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tW-~dl~wlr~~~~lPivlKGIl~~ 239 (249)
.... +|..++ +-++++|+.+++.+++.++.++
T Consensus 97 ~~~~-----------------------------------------------~p~~~~~~~i~~~~~~~~~~~v~~~~~t~ 129 (223)
T 1y0e_A 97 TLQQ-----------------------------------------------RPKETLDELVSYIRTHAPNVEIMADIATV 129 (223)
T ss_dssp SCSC-----------------------------------------------CSSSCHHHHHHHHHHHCTTSEEEEECSSH
T ss_pred eccc-----------------------------------------------CcccCHHHHHHHHHHhCCCceEEecCCCH
Confidence 2100 011233 4578999988666777799999
Q ss_pred HHHHHHhhCC
Q 025657 240 EDGSKLLSKE 249 (249)
Q Consensus 240 eDA~~A~~~~ 249 (249)
++++++.+.|
T Consensus 130 ~e~~~~~~~G 139 (223)
T 1y0e_A 130 EEAKNAARLG 139 (223)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHHHHHcC
Confidence 9999998876
No 71
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=88.81 E-value=0.73 Score=39.77 Aligned_cols=79 Identities=19% Similarity=0.239 Sum_probs=54.3
Q ss_pred HHHHHhcCCCceeEEEccccChHHHHHHHHHHHHcCCcEEEEeecCCCCCCchhhhhccCCCCCccccccccccccCCCC
Q 025657 117 VEEVSSTGPGIRFFQLYVTKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMD 196 (249)
Q Consensus 117 leeia~~~~~~~wfQlY~~~d~~~~~~li~rA~~aG~~alvvTvD~p~~g~Re~d~r~~~~~p~~~~~~~~~~~~~~~~~ 196 (249)
|.||.++.|...|+. + ....++.+..+++|+.+|=|-.|-.. |
T Consensus 49 IaE~k~aSPskg~i~-----~-~~p~~~A~~~~~~GA~~isvlt~~~~-----------f-------------------- 91 (254)
T 1vc4_A 49 IAEVKRQSPSEGLIR-----E-VDPVEAALAYARGGARAVSVLTEPHR-----------F-------------------- 91 (254)
T ss_dssp EEEECSCCTTTCCCC-----S-CCHHHHHHHHHHTTCSEEEEECCCSS-----------S--------------------
T ss_pred EeeecCCCcCCCcCC-----C-CCHHHHHHHHHHcCCCEEEEecchhh-----------h--------------------
Confidence 466766677555542 2 23457788889999999866222100 0
Q ss_pred CCCCchhhhHhhhhcCCCCCHHHHHHHHHhCCCCEEEEc-cCCHHHHHHHhhCC
Q 025657 197 KTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKG-VLTAEDGSKLLSKE 249 (249)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~tW~dl~wlr~~~~lPivlKG-Il~~eDA~~A~~~~ 249 (249)
.=+.++++.+|+.+++||..|+ |.++.+...|.++|
T Consensus 92 -----------------~G~~~~l~~i~~~v~lPvl~kdfI~d~~qi~~a~~~G 128 (254)
T 1vc4_A 92 -----------------GGSLLDLKRVREAVDLPLLRKDFVVDPFMLEEARAFG 128 (254)
T ss_dssp -----------------CCCHHHHHHHHHHCCSCEEEESCCCSHHHHHHHHHTT
T ss_pred -----------------ccCHHHHHHHHHhcCCCEEECCcCCCHHHHHHHHHcC
Confidence 0035789999999999999998 66666888888776
No 72
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=88.65 E-value=0.49 Score=41.20 Aligned_cols=34 Identities=21% Similarity=0.238 Sum_probs=29.5
Q ss_pred CHHHHHHHHHhCCCCEEEE-ccCCHHHHHHHhhCC
Q 025657 216 NWKDVKWLQTITSLPILVK-GVLTAEDGSKLLSKE 249 (249)
Q Consensus 216 tW~dl~wlr~~~~lPivlK-GIl~~eDA~~A~~~~ 249 (249)
.|+.++.+++.++.||+.= ||.+++||.++++.|
T Consensus 229 ~~~~i~~i~~~~~ipvia~GGI~~~~d~~~~l~~G 263 (311)
T 1ep3_A 229 ALKLIHQVAQDVDIPIIGMGGVANAQDVLEMYMAG 263 (311)
T ss_dssp HHHHHHHHHTTCSSCEEECSSCCSHHHHHHHHHHT
T ss_pred HHHHHHHHHHhcCCCEEEECCcCCHHHHHHHHHcC
Confidence 4678899999999999986 588999999998765
No 73
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=88.61 E-value=3.7 Score=36.14 Aligned_cols=35 Identities=11% Similarity=0.027 Sum_probs=30.2
Q ss_pred CCHHHHHHHHHhCCCCEEEEc-cCCHHHHHHHhhCC
Q 025657 215 LNWKDVKWLQTITSLPILVKG-VLTAEDGSKLLSKE 249 (249)
Q Consensus 215 ~tW~dl~wlr~~~~lPivlKG-Il~~eDA~~A~~~~ 249 (249)
.+|+-++.+++..+.||++=| |.+++|+..+++.|
T Consensus 159 ~~~~~l~~v~~~~~iPviaaGGI~~~~~v~~al~~G 194 (328)
T 2gjl_A 159 PGLVLLPAAANRLRVPIIASGGFADGRGLVAALALG 194 (328)
T ss_dssp CHHHHHHHHHTTCCSCEEEESSCCSHHHHHHHHHHT
T ss_pred cHHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcC
Confidence 578899999999999999866 77999999988765
No 74
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=88.58 E-value=2.7 Score=38.06 Aligned_cols=34 Identities=12% Similarity=0.064 Sum_probs=29.7
Q ss_pred CHHHHHHHHHhCCCCEEEEccCCHHHHHHHhhCC
Q 025657 216 NWKDVKWLQTITSLPILVKGVLTAEDGSKLLSKE 249 (249)
Q Consensus 216 tW~dl~wlr~~~~lPivlKGIl~~eDA~~A~~~~ 249 (249)
.|+-++++|+.+++||+.=|=.++|||+.+++.|
T Consensus 281 ~~~~~~~i~~~~~iPvi~~Ggi~~~~a~~~l~~g 314 (365)
T 2gou_A 281 PVSFKRALREAYQGVLIYAGRYNAEKAEQAINDG 314 (365)
T ss_dssp CHHHHHHHHHHCCSEEEEESSCCHHHHHHHHHTT
T ss_pred cHHHHHHHHHHCCCcEEEeCCCCHHHHHHHHHCC
Confidence 4677899999999999988766999999999875
No 75
>2uva_G Fatty acid synthase beta subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; HET: FMN; 3.10A {Thermomyces lanuginosus} PDB: 2uvc_G*
Probab=88.49 E-value=1.8 Score=47.77 Aligned_cols=98 Identities=19% Similarity=0.202 Sum_probs=61.3
Q ss_pred eeccccCCC-CCCcccee---ecCcccccceeeccccccccCCChhhHHHHHHHHhcCCcEEecCCCCCCHHHHHh----
Q 025657 51 FRPRILRDV-SKIDMTTT---VLGFNISMPIMIAPTAFQKMAHPEGECATARAASAAGTIMTLSSWATSSVEEVSS---- 122 (249)
Q Consensus 51 l~pr~l~~v-~~~d~st~---llG~~~~~Pi~iaP~g~~~l~h~~gE~~~AraA~~~gi~~~lss~ss~sleeia~---- 122 (249)
|.||..+-- .+++++|. ++| ..||+.|||+..- .+-.+|.|+.++|..-+++..+..+.|++.+
T Consensus 558 f~prlv~~~~~~~~l~t~~t~~lg---~~PIi~a~M~~~v-----s~~~LaaAva~aGglG~i~g~g~~~~e~l~~~i~~ 629 (2060)
T 2uva_G 558 HGPRLVKTSVGQTFVDTKMSRLLG---VPPVMVAGMTPTT-----VPWDFVAATMNAGYHIELAGGGYYNAQKMSDAISK 629 (2060)
T ss_dssp HCCEEEECTTCCEEEECHHHHHHT---SCSEEECCCTTTT-----CSHHHHHHHHHTTCEECEEGGGCCSHHHHHHHHHH
T ss_pred cCCcceecCCCceecchhhhhccc---cceEEecCCCCcc-----ccHHHHHHHHHCCCEEEECcCCCCCHHHHHHHHHH
Confidence 568777522 33455543 577 5999999988321 2556899999999999995555667665532
Q ss_pred ---cC-C-CceeEEEccccCh--HHHHHHHHHHHHcCCcEE
Q 025657 123 ---TG-P-GIRFFQLYVTKHR--NVDAQLVKRAERAGFKAI 156 (249)
Q Consensus 123 ---~~-~-~~~wfQlY~~~d~--~~~~~li~rA~~aG~~al 156 (249)
.. + .+.-+-+.....+ +...++++.+.+.|++..
T Consensus 630 vk~~~~~~~p~gvN~~~~~p~~~~~~~~~~~~~~~~gv~i~ 670 (2060)
T 2uva_G 630 IEKAIPPGRGITVNLIYVNPRAMGWQIPLLGRLRADGVPIE 670 (2060)
T ss_dssp HGGGSCTTCCEEEEEETTCTTHHHHHHHHHHHHHTTTCCEE
T ss_pred HHhhcccCCCeEecccccCcccchhHHHHHHHHHHcCCCcc
Confidence 22 1 2222333332222 124588899999999873
No 76
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=88.06 E-value=2.6 Score=39.73 Aligned_cols=115 Identities=17% Similarity=0.152 Sum_probs=68.8
Q ss_pred hHHHHHHHHhcCCcEEe--cCCCCCC-----HHHHHhcCCCceeE--EEccccChHHHHHHHHHHHHcCCcEEEEeecCC
Q 025657 93 ECATARAASAAGTIMTL--SSWATSS-----VEEVSSTGPGIRFF--QLYVTKHRNVDAQLVKRAERAGFKAIALTVDTP 163 (249)
Q Consensus 93 E~~~AraA~~~gi~~~l--ss~ss~s-----leeia~~~~~~~wf--QlY~~~d~~~~~~li~rA~~aG~~alvvTvD~p 163 (249)
....++.+.++|+..+. ++.+... +++|.+..|+...+ .+ .+.+..++++++|+.+|.|+.-.
T Consensus 256 ~~~~a~~~~~aG~d~v~i~~~~G~~~~~~~~i~~i~~~~~~~pvi~~~v-------~t~~~a~~l~~aGad~I~vg~~~- 327 (514)
T 1jcn_A 256 DKYRLDLLTQAGVDVIVLDSSQGNSVYQIAMVHYIKQKYPHLQVIGGNV-------VTAAQAKNLIDAGVDGLRVGMGC- 327 (514)
T ss_dssp HHHHHHHHHHTTCSEEEECCSCCCSHHHHHHHHHHHHHCTTCEEEEEEE-------CSHHHHHHHHHHTCSEEEECSSC-
T ss_pred hHHHHHHHHHcCCCEEEeeccCCcchhHHHHHHHHHHhCCCCceEeccc-------chHHHHHHHHHcCCCEEEECCCC-
Confidence 35677778889998775 2333221 45555555432222 12 23456788899999999984421
Q ss_pred CCCCchhhhhccCCCCCccccccccccccCCCCCCCCchhhhHhhhhcCCCCCHHHHHHHHHhCCCCEEE-EccCCHHHH
Q 025657 164 RLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILV-KGVLTAEDG 242 (249)
Q Consensus 164 ~~g~Re~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tW~dl~wlr~~~~lPivl-KGIl~~eDA 242 (249)
|.=.. .| ...+. +. ....++..++.+++..+.||+. =||.+++|+
T Consensus 328 --G~~~~-t~------------~~~~~--------g~-----------~~~~~~~~~~~~~~~~~ipVia~GGI~~~~di 373 (514)
T 1jcn_A 328 --GSICI-TQ------------EVMAC--------GR-----------PQGTAVYKVAEYARRFGVPIIADGGIQTVGHV 373 (514)
T ss_dssp --SCCBT-TB------------CCCSC--------CC-----------CHHHHHHHHHHHHGGGTCCEEEESCCCSHHHH
T ss_pred --Ccccc-cc------------cccCC--------Cc-----------cchhHHHHHHHHHhhCCCCEEEECCCCCHHHH
Confidence 11000 00 00000 00 0012467788899989999997 579999999
Q ss_pred HHHhhCC
Q 025657 243 SKLLSKE 249 (249)
Q Consensus 243 ~~A~~~~ 249 (249)
.+|+..|
T Consensus 374 ~kala~G 380 (514)
T 1jcn_A 374 VKALALG 380 (514)
T ss_dssp HHHHHTT
T ss_pred HHHHHcC
Confidence 9999876
No 77
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=88.00 E-value=1.5 Score=37.21 Aligned_cols=34 Identities=18% Similarity=0.317 Sum_probs=28.8
Q ss_pred CHHHHHHHHHhCCCCEEEEc-cCCHHHHHHHhhCC
Q 025657 216 NWKDVKWLQTITSLPILVKG-VLTAEDGSKLLSKE 249 (249)
Q Consensus 216 tW~dl~wlr~~~~lPivlKG-Il~~eDA~~A~~~~ 249 (249)
.++.++.+++..+.||+++| |-+++|+..+.+.|
T Consensus 62 ~~~~i~~i~~~~~iPvi~~ggi~~~~~i~~~~~~G 96 (266)
T 2w6r_A 62 DTEMIRFVRPLTTLPIIASGGAGKMEHFLEAFLAG 96 (266)
T ss_dssp CHHHHHHHGGGCCSCEEEESCCCSTHHHHHHHHHT
T ss_pred cHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcC
Confidence 57889999999999999975 67789999888765
No 78
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=87.74 E-value=0.74 Score=40.35 Aligned_cols=80 Identities=19% Similarity=0.185 Sum_probs=53.9
Q ss_pred HHHHHhcCCCceeEEEccccChHHHHHHHHHHHHcCCcEEEEeecCCCCCCchhhhhccCCCCCccccccccccccCCCC
Q 025657 117 VEEVSSTGPGIRFFQLYVTKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMD 196 (249)
Q Consensus 117 leeia~~~~~~~wfQlY~~~d~~~~~~li~rA~~aG~~alvvTvD~p~~g~Re~d~r~~~~~p~~~~~~~~~~~~~~~~~ 196 (249)
|.||+++.|..-++.- |- ...++.+..+++|+.+|=|-.|...++
T Consensus 62 IaE~KraSPSkG~i~~----~~-dp~~~A~~y~~~GA~~IsVltd~~~f~------------------------------ 106 (272)
T 3tsm_A 62 IAEIKKASPSKGLIRP----DF-DPPALAKAYEEGGAACLSVLTDTPSFQ------------------------------ 106 (272)
T ss_dssp EEEECSEETTTEESCS----SC-CHHHHHHHHHHTTCSEEEEECCSTTTC------------------------------
T ss_pred EEEeccCCCCCCccCC----CC-CHHHHHHHHHHCCCCEEEEeccccccC------------------------------
Confidence 4566666665444431 22 234677778889999985544532210
Q ss_pred CCCCchhhhHhhhhcCCCCCHHHHHHHHHhCCCCEEEEc-cCCHHHHHHHhhCC
Q 025657 197 KTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKG-VLTAEDGSKLLSKE 249 (249)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~tW~dl~wlr~~~~lPivlKG-Il~~eDA~~A~~~~ 249 (249)
. +.++|+.+|+..++||+.|+ |.++.+...|.++|
T Consensus 107 ----------------G--s~~~L~~ir~~v~lPVl~Kdfi~d~~qi~ea~~~G 142 (272)
T 3tsm_A 107 ----------------G--APEFLTAARQACSLPALRKDFLFDPYQVYEARSWG 142 (272)
T ss_dssp ----------------C--CHHHHHHHHHTSSSCEEEESCCCSTHHHHHHHHTT
T ss_pred ----------------C--CHHHHHHHHHhcCCCEEECCccCCHHHHHHHHHcC
Confidence 0 34788999999999999997 67777888888776
No 79
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=87.51 E-value=3.2 Score=36.79 Aligned_cols=35 Identities=9% Similarity=0.196 Sum_probs=29.8
Q ss_pred CCHHHHHHHHHhCCCCEEEEc-cCCHHHHHHHhhCC
Q 025657 215 LNWKDVKWLQTITSLPILVKG-VLTAEDGSKLLSKE 249 (249)
Q Consensus 215 ~tW~dl~wlr~~~~lPivlKG-Il~~eDA~~A~~~~ 249 (249)
.+|+-++.+++..+.||++=| |.+++|+..|++.|
T Consensus 163 ~~~~ll~~i~~~~~iPviaaGGI~~~~dv~~al~~G 198 (326)
T 3bo9_A 163 TTFVLVNKVSRSVNIPVIAAGGIADGRGMAAAFALG 198 (326)
T ss_dssp CHHHHHHHHHHHCSSCEEEESSCCSHHHHHHHHHHT
T ss_pred cHHHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHhC
Confidence 478889999998999999865 77799999998765
No 80
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=87.34 E-value=4 Score=36.13 Aligned_cols=104 Identities=14% Similarity=0.151 Sum_probs=66.8
Q ss_pred HHHHHHHHhcCCcEEecCCCCCCHHHHHh--cCCCceeEEEccccChHHHHHHHHHHHHcCCcEEEEeecCCCCCCchhh
Q 025657 94 CATARAASAAGTIMTLSSWATSSVEEVSS--TGPGIRFFQLYVTKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREAD 171 (249)
Q Consensus 94 ~~~AraA~~~gi~~~lss~ss~sleeia~--~~~~~~wfQlY~~~d~~~~~~li~rA~~aG~~alvvTvD~p~~g~Re~d 171 (249)
...++.|.+.|..++....+ .|.+-+.. ..+-+.+..+ . +.+.+++++++|+.+|+++ ....|-
T Consensus 78 ~~~~~~a~~~g~d~V~~~~g-~p~~~i~~l~~~g~~v~~~v---~----~~~~a~~~~~~GaD~i~v~--g~~~GG---- 143 (332)
T 2z6i_A 78 EDIVDLVIEEGVKVVTTGAG-NPSKYMERFHEAGIIVIPVV---P----SVALAKRMEKIGADAVIAE--GMEAGG---- 143 (332)
T ss_dssp HHHHHHHHHTTCSEEEECSS-CGGGTHHHHHHTTCEEEEEE---S----SHHHHHHHHHTTCSCEEEE--CTTSSE----
T ss_pred HHHHHHHHHCCCCEEEECCC-ChHHHHHHHHHcCCeEEEEe---C----CHHHHHHHHHcCCCEEEEE--CCCCCC----
Confidence 35677788889988876554 34333322 1233456555 1 2345677888999988774 111000
Q ss_pred hhccCCCCCccccccccccccCCCCCCCCchhhhHhhhhcCCCCCHHHHHHHHHhCCCCEEEEc-cCCHHHHHHHhhCC
Q 025657 172 IKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKG-VLTAEDGSKLLSKE 249 (249)
Q Consensus 172 ~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tW~dl~wlr~~~~lPivlKG-Il~~eDA~~A~~~~ 249 (249)
.. ....+|+-++.+++..+.||++=| |.+++|+..+++.|
T Consensus 144 ----~~----------------------------------g~~~~~~ll~~i~~~~~iPViaaGGI~~~~~~~~al~~G 184 (332)
T 2z6i_A 144 ----HI----------------------------------GKLTTMTLVRQVATAISIPVIAAGGIADGEGAAAGFMLG 184 (332)
T ss_dssp ----EC----------------------------------CSSCHHHHHHHHHHHCSSCEEEESSCCSHHHHHHHHHTT
T ss_pred ----CC----------------------------------CCccHHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcC
Confidence 00 013478889999999999999865 77799999998765
No 81
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=87.27 E-value=0.95 Score=40.02 Aligned_cols=31 Identities=32% Similarity=0.711 Sum_probs=25.2
Q ss_pred CCHHHHHHHHHhCCCCEEEEc-cCCHHHHHHHhh
Q 025657 215 LNWKDVKWLQTITSLPILVKG-VLTAEDGSKLLS 247 (249)
Q Consensus 215 ~tW~dl~wlr~~~~lPivlKG-Il~~eDA~~A~~ 247 (249)
.+|+-++.+++ +.||+.=| |.+++||.++++
T Consensus 172 ~~~~~i~~i~~--~ipVi~~GgI~s~~da~~~l~ 203 (318)
T 1vhn_A 172 AEWKALSVLEK--RIPTFVSGDIFTPEDAKRALE 203 (318)
T ss_dssp CCGGGGGGSCC--SSCEEEESSCCSHHHHHHHHH
T ss_pred cCHHHHHHHHc--CCeEEEECCcCCHHHHHHHHH
Confidence 45766777777 89999854 789999999987
No 82
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=86.70 E-value=1.7 Score=36.79 Aligned_cols=34 Identities=12% Similarity=0.102 Sum_probs=29.7
Q ss_pred CCHHHHHHHHHhCCCCEEEEc-cCCHHHHHHHhhCC
Q 025657 215 LNWKDVKWLQTITSLPILVKG-VLTAEDGSKLLSKE 249 (249)
Q Consensus 215 ~tW~dl~wlr~~~~lPivlKG-Il~~eDA~~A~~~~ 249 (249)
.+|+-++.+++. +.|+|.=| |.+++|+.++.+.|
T Consensus 169 ~~~~li~~l~~~-~ipvIA~GGI~t~~d~~~~~~~G 203 (229)
T 3q58_A 169 PDLAMVTQLSHA-GCRVIAEGRYNTPALAANAIEHG 203 (229)
T ss_dssp CCHHHHHHHHTT-TCCEEEESSCCSHHHHHHHHHTT
T ss_pred CCHHHHHHHHHc-CCCEEEECCCCCHHHHHHHHHcC
Confidence 378889999988 99999886 77999999999876
No 83
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=86.67 E-value=5.8 Score=35.70 Aligned_cols=83 Identities=12% Similarity=0.075 Sum_probs=56.2
Q ss_pred ceeEEEccc-------cChHHHHHHHHHHHHcCCcEEEEeecCCCCCCchhhhhccCCCCCccccccccccccCCCCCCC
Q 025657 127 IRFFQLYVT-------KHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTD 199 (249)
Q Consensus 127 ~~wfQlY~~-------~d~~~~~~li~rA~~aG~~alvvTvD~p~~g~Re~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~ 199 (249)
+..+.+-.. .+.+...+++++.+++|+..|-|+.-.... ....|
T Consensus 227 pV~vRis~~~~~~~G~~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~---------~~~~~-------------------- 277 (363)
T 3l5l_A 227 PLTARFGVLEYDGRDEQTLEESIELARRFKAGGLDLLSVSVGFTIP---------DTNIP-------------------- 277 (363)
T ss_dssp CEEEEEEEECSSSCHHHHHHHHHHHHHHHHHTTCCEEEEEECCCSS---------CCCCC--------------------
T ss_pred eEEEEecchhcCCCCCCCHHHHHHHHHHHHHcCCCEEEEecCcccc---------ccccC--------------------
Confidence 466766542 234566788899999999988776521000 00000
Q ss_pred CchhhhHhhhhcCCCCCHHHHHHHHHhCCCCEEEEc-cCCHHHHHHHhhCC
Q 025657 200 DSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKG-VLTAEDGSKLLSKE 249 (249)
Q Consensus 200 ~~~~~~~~~~~~~~~~tW~dl~wlr~~~~lPivlKG-Il~~eDA~~A~~~~ 249 (249)
..+...|+-++++|+.+++||+.=| |.++++|+.+++.|
T Consensus 278 -----------~~~~~~~~~~~~ir~~~~iPVi~~GgI~s~e~a~~~l~~G 317 (363)
T 3l5l_A 278 -----------WGPAFMGPIAERVRREAKLPVTSAWGFGTPQLAEAALQAN 317 (363)
T ss_dssp -----------CCTTTTHHHHHHHHHHHTCCEEECSSTTSHHHHHHHHHTT
T ss_pred -----------CCcchhHHHHHHHHHHcCCcEEEeCCCCCHHHHHHHHHCC
Confidence 0123567889999999999999886 56899999999876
No 84
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=86.24 E-value=7 Score=35.32 Aligned_cols=34 Identities=18% Similarity=0.244 Sum_probs=26.0
Q ss_pred CHHHHHHHH---HhCCCCEEEE-ccCCHHHHHHHhhCC
Q 025657 216 NWKDVKWLQ---TITSLPILVK-GVLTAEDGSKLLSKE 249 (249)
Q Consensus 216 tW~dl~wlr---~~~~lPivlK-GIl~~eDA~~A~~~~ 249 (249)
+++.+.+++ +..+.|||.= ||.+++|+.+|+..|
T Consensus 192 ~~~~i~~v~~~~~~~~iPVIA~GGI~~~~di~kala~G 229 (361)
T 3khj_A 192 QITAIEKCSSVASKFGIPIIADGGIRYSGDIGKALAVG 229 (361)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEESCCCSHHHHHHHHHHT
T ss_pred cHHHHHHHHHHHhhcCCeEEEECCCCCHHHHHHHHHcC
Confidence 345566664 4468999986 799999999998876
No 85
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=86.02 E-value=1.9 Score=38.46 Aligned_cols=34 Identities=12% Similarity=0.103 Sum_probs=29.0
Q ss_pred CHHHHHHHHHhC-CCCEEE-EccCCHHHHHHHhhCC
Q 025657 216 NWKDVKWLQTIT-SLPILV-KGVLTAEDGSKLLSKE 249 (249)
Q Consensus 216 tW~dl~wlr~~~-~lPivl-KGIl~~eDA~~A~~~~ 249 (249)
+|+.|+.+++.. +.||+. =||.+++|+.+++..|
T Consensus 238 ~~~~l~~v~~~~~~ipvia~GGI~~~~d~~k~l~~G 273 (349)
T 1p0k_A 238 TAASLAEIRSEFPASTMIASGGLQDALDVAKAIALG 273 (349)
T ss_dssp HHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHHTT
T ss_pred HHHHHHHHHHhcCCCeEEEECCCCCHHHHHHHHHcC
Confidence 578889998875 789887 5799999999998876
No 86
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=86.00 E-value=3.7 Score=33.85 Aligned_cols=35 Identities=9% Similarity=0.144 Sum_probs=30.2
Q ss_pred CCHHHHHHHHHhCCCCEEEEc-cCCHHHHHHHhhCC
Q 025657 215 LNWKDVKWLQTITSLPILVKG-VLTAEDGSKLLSKE 249 (249)
Q Consensus 215 ~tW~dl~wlr~~~~lPivlKG-Il~~eDA~~A~~~~ 249 (249)
.+|+.++.+++..+.||++=| |.+++|+.++.++|
T Consensus 185 ~~~~~i~~l~~~~~~pvia~GGi~~~~~~~~~~~~G 220 (253)
T 1h5y_A 185 YDVELIRRVADSVRIPVIASGGAGRVEHFYEAAAAG 220 (253)
T ss_dssp CCHHHHHHHHHHCSSCEEEESCCCSHHHHHHHHHTT
T ss_pred CCHHHHHHHHHhcCCCEEEeCCCCCHHHHHHHHHcC
Confidence 368899999999999999865 88899999998876
No 87
>3o07_A Pyridoxine biosynthesis protein SNZ1; (beta/alpha)8-barrel, pyridoxal 5-phosphate synthase, PLP G3 SNO1, biosynthetic protein; HET: 1GP; 1.80A {Saccharomyces cerevisiae} PDB: 3o06_A 3o05_A* 3fem_A
Probab=85.39 E-value=0.51 Score=41.77 Aligned_cols=36 Identities=22% Similarity=0.225 Sum_probs=32.5
Q ss_pred CCCHHHHHHHHHhCCCCEEE---EccCCHHHHHHHhhCC
Q 025657 214 SLNWKDVKWLQTITSLPILV---KGVLTAEDGSKLLSKE 249 (249)
Q Consensus 214 ~~tW~dl~wlr~~~~lPivl---KGIl~~eDA~~A~~~~ 249 (249)
..+|+-|+.+++..++|||+ =||-+|+||.++.+.|
T Consensus 184 ~ad~elI~~Ike~~~IPVV~IAnGGI~TpedA~~~le~G 222 (291)
T 3o07_A 184 RVPVSLLKDVLEKGKLPVVNFAAGGVATPADAALLMQLG 222 (291)
T ss_dssp TSCHHHHHHHHHHTSCSSCEEBCSSCCSHHHHHHHHHTT
T ss_pred CCCHHHHHHHHHccCCCEEEecCCCCCCHHHHHHHHHhC
Confidence 45799999999999999986 7999999999999876
No 88
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=85.29 E-value=1.8 Score=39.30 Aligned_cols=86 Identities=15% Similarity=0.155 Sum_probs=58.6
Q ss_pred CCCHHHHH---hcCCCceeEEEccccChHHHHHHHHHHHHcCCcEEEEeecCCCCCCchhhhhccCCCCCcccccccccc
Q 025657 114 TSSVEEVS---STGPGIRFFQLYVTKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGL 190 (249)
Q Consensus 114 s~sleeia---~~~~~~~wfQlY~~~d~~~~~~li~rA~~aG~~alvvTvD~p~~g~Re~d~r~~~~~p~~~~~~~~~~~ 190 (249)
+.+.|+|. +..+.|.+++.-. +.+..++|+++|+.+|+|+- .|.|. + .
T Consensus 203 ~~~w~~i~~lr~~~~~PvivK~v~------~~e~A~~a~~~GaD~I~vsn----~GG~~------~-----------d-- 253 (352)
T 3sgz_A 203 SFCWNDLSLLQSITRLPIILKGIL------TKEDAELAMKHNVQGIVVSN----HGGRQ------L-----------D-- 253 (352)
T ss_dssp TCCHHHHHHHHHHCCSCEEEEEEC------SHHHHHHHHHTTCSEEEECC----GGGTS------S-----------C--
T ss_pred CCCHHHHHHHHHhcCCCEEEEecC------cHHHHHHHHHcCCCEEEEeC----CCCCc------c-----------C--
Confidence 45556654 4445677777632 23557889999999998762 12110 0 0
Q ss_pred ccCCCCCCCCchhhhHhhhhcCCCCCHHHHHHHHHhC--CCCEEEE-ccCCHHHHHHHhhCC
Q 025657 191 YIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTIT--SLPILVK-GVLTAEDGSKLLSKE 249 (249)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~tW~dl~wlr~~~--~lPivlK-GIl~~eDA~~A~~~~ 249 (249)
...-+|+-|..+++.. +.||+.= ||.+++|+.+|+..|
T Consensus 254 ---------------------~~~~~~~~L~~i~~av~~~ipVia~GGI~~g~Dv~kaLalG 294 (352)
T 3sgz_A 254 ---------------------EVSASIDALREVVAAVKGKIEVYMDGGVRTGTDVLKALALG 294 (352)
T ss_dssp ---------------------SSCCHHHHHHHHHHHHTTSSEEEEESSCCSHHHHHHHHHTT
T ss_pred ---------------------CCccHHHHHHHHHHHhCCCCeEEEECCCCCHHHHHHHHHcC
Confidence 0134678888888876 6899987 799999999999876
No 89
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=84.32 E-value=2.3 Score=36.01 Aligned_cols=34 Identities=9% Similarity=0.014 Sum_probs=29.2
Q ss_pred CCHHHHHHHHHhCCCCEEEE-ccCCHHHHHHHhhCC
Q 025657 215 LNWKDVKWLQTITSLPILVK-GVLTAEDGSKLLSKE 249 (249)
Q Consensus 215 ~tW~dl~wlr~~~~lPivlK-GIl~~eDA~~A~~~~ 249 (249)
.+|+-++.+++. +.|+|.= ||.+++|+.++.+.|
T Consensus 169 ~~~~~i~~l~~~-~ipvIA~GGI~t~~d~~~~~~~G 203 (232)
T 3igs_A 169 PDLPLVKALHDA-GCRVIAEGRYNSPALAAEAIRYG 203 (232)
T ss_dssp CCHHHHHHHHHT-TCCEEEESCCCSHHHHHHHHHTT
T ss_pred CCHHHHHHHHhc-CCcEEEECCCCCHHHHHHHHHcC
Confidence 378889999998 9999966 577899999999876
No 90
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=84.15 E-value=1.5 Score=36.78 Aligned_cols=34 Identities=29% Similarity=0.305 Sum_probs=28.7
Q ss_pred CHHHHHHHHHhCCCCEEEEc-cCCHHHHHHHhhCC
Q 025657 216 NWKDVKWLQTITSLPILVKG-VLTAEDGSKLLSKE 249 (249)
Q Consensus 216 tW~dl~wlr~~~~lPivlKG-Il~~eDA~~A~~~~ 249 (249)
.++.++.+++..+.||+++| |-+++|++.|++.|
T Consensus 63 ~~~~i~~i~~~~~iPvi~~Ggi~~~~~~~~~~~~G 97 (252)
T 1ka9_F 63 LLDVVARVAERVFIPLTVGGGVRSLEDARKLLLSG 97 (252)
T ss_dssp HHHHHHHHHTTCCSCEEEESSCCSHHHHHHHHHHT
T ss_pred cHHHHHHHHHhCCCCEEEECCcCCHHHHHHHHHcC
Confidence 46778999999999999975 56699999998865
No 91
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=83.95 E-value=2.8 Score=38.01 Aligned_cols=86 Identities=16% Similarity=0.200 Sum_probs=56.9
Q ss_pred CCCHHHHH---hcCCCceeEEEccccChHHHHHHHHHHHHcCCcEEEEeecCCCCCCchhhhhccCCCCCcccccccccc
Q 025657 114 TSSVEEVS---STGPGIRFFQLYVTKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGL 190 (249)
Q Consensus 114 s~sleeia---~~~~~~~wfQlY~~~d~~~~~~li~rA~~aG~~alvvTvD~p~~g~Re~d~r~~~~~p~~~~~~~~~~~ 190 (249)
+.+.++|. +..+.|.++... .+.+..++++++|+++|+|.- . |.|. ..
T Consensus 215 ~~~~~~i~~lr~~~~~PvivK~v------~~~e~a~~a~~~Gad~I~vs~---~-ggr~-----~~-------------- 265 (368)
T 2nli_A 215 KISPRDIEEIAGHSGLPVFVKGI------QHPEDADMAIKRGASGIWVSN---H-GARQ-----LY-------------- 265 (368)
T ss_dssp BCCHHHHHHHHHHSSSCEEEEEE------CSHHHHHHHHHTTCSEEEECC---G-GGTS-----CS--------------
T ss_pred hhhHHHHHHHHHHcCCCEEEEcC------CCHHHHHHHHHcCCCEEEEcC---C-CcCC-----CC--------------
Confidence 34555554 444556777643 234567899999999998731 1 2211 00
Q ss_pred ccCCCCCCCCchhhhHhhhhcCCCCCHHHHHHHHHhC--CCCEEEE-ccCCHHHHHHHhhCC
Q 025657 191 YIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTIT--SLPILVK-GVLTAEDGSKLLSKE 249 (249)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~tW~dl~wlr~~~--~lPivlK-GIl~~eDA~~A~~~~ 249 (249)
...-+|+-+..+++.. +.|||.= ||.+++|+.+|+..|
T Consensus 266 ---------------------~g~~~~~~l~~v~~~v~~~ipVia~GGI~~g~D~~kalalG 306 (368)
T 2nli_A 266 ---------------------EAPGSFDTLPAIAERVNKRVPIVFDSGVRRGEHVAKALASG 306 (368)
T ss_dssp ---------------------SCCCHHHHHHHHHHHHTTSSCEEECSSCCSHHHHHHHHHTT
T ss_pred ---------------------CCCChHHHHHHHHHHhCCCCeEEEECCCCCHHHHHHHHHcC
Confidence 0133678888898876 5888875 799999999999876
No 92
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=83.86 E-value=5.1 Score=33.27 Aligned_cols=34 Identities=18% Similarity=0.208 Sum_probs=30.0
Q ss_pred CCHHHHHHHHHhCCCCEEEEc-cCCHHHHHHHhhC
Q 025657 215 LNWKDVKWLQTITSLPILVKG-VLTAEDGSKLLSK 248 (249)
Q Consensus 215 ~tW~dl~wlr~~~~lPivlKG-Il~~eDA~~A~~~ 248 (249)
.+|+-++.+++..+.||+.=| |.+++|+.++.++
T Consensus 180 ~~~~~~~~l~~~~~ipvia~GGI~~~~d~~~~~~~ 214 (244)
T 2y88_A 180 PNLDLLAGVADRTDAPVIASGGVSSLDDLRAIATL 214 (244)
T ss_dssp CCHHHHHHHHTTCSSCEEEESCCCSHHHHHHHHTT
T ss_pred CCHHHHHHHHHhCCCCEEEECCCCCHHHHHHHHhh
Confidence 479999999999999999965 8889999999886
No 93
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=83.64 E-value=0.68 Score=39.17 Aligned_cols=35 Identities=17% Similarity=0.338 Sum_probs=0.0
Q ss_pred CCHHHHHHHHHhCCCCEEEEc-cCCHHHHHHHhhCC
Q 025657 215 LNWKDVKWLQTITSLPILVKG-VLTAEDGSKLLSKE 249 (249)
Q Consensus 215 ~tW~dl~wlr~~~~lPivlKG-Il~~eDA~~A~~~~ 249 (249)
.+|+-++.+++..+.|++.=| |.++||+..+.+.|
T Consensus 187 ~~~~~~~~i~~~~~iPvia~GGI~~~~d~~~~~~~G 222 (247)
T 3tdn_A 187 YDTEMIRFVRPLTTLPIIASGGAGKMEHFLEAFLRG 222 (247)
T ss_dssp ------------------------------------
T ss_pred CCHHHHHHHHHhCCCCEEEECCCCCHHHHHHHHHcC
Confidence 578889999999999998765 88899999988765
No 94
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=83.26 E-value=6.4 Score=32.21 Aligned_cols=36 Identities=11% Similarity=0.172 Sum_probs=30.8
Q ss_pred CCCHHHHHHHHHhCC-CCEEEEccCCHHHHHHHhhCC
Q 025657 214 SLNWKDVKWLQTITS-LPILVKGVLTAEDGSKLLSKE 249 (249)
Q Consensus 214 ~~tW~dl~wlr~~~~-lPivlKGIl~~eDA~~A~~~~ 249 (249)
..+|+.++++++..+ .|+++=|=.++|++..+.++|
T Consensus 157 ~~~~~~l~~~~~~~~~~pvia~GGI~~~nv~~~~~~G 193 (227)
T 2tps_A 157 VQGVSLIEAVRRQGISIPIVGIGGITIDNAAPVIQAG 193 (227)
T ss_dssp CCTTHHHHHHHHTTCCCCEEEESSCCTTTSHHHHHTT
T ss_pred ccCHHHHHHHHHhCCCCCEEEEcCCCHHHHHHHHHcC
Confidence 568999999999888 999988866699998888765
No 95
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=83.17 E-value=0.6 Score=43.88 Aligned_cols=40 Identities=20% Similarity=0.468 Sum_probs=32.5
Q ss_pred hhcccceeccccC-CCCCCccceeecC-cccccceeeccccc
Q 025657 45 AFSRILFRPRILR-DVSKIDMTTTVLG-FNISMPIMIAPTAF 84 (249)
Q Consensus 45 af~~~~l~pr~l~-~v~~~d~st~llG-~~~~~Pi~iaP~g~ 84 (249)
-|+++.|+|..-. ..+++|++|++-+ ..+..||+.+||..
T Consensus 16 ~~dd~~~~p~~~~~~~~~v~l~t~lt~~l~l~~PIi~a~m~~ 57 (486)
T 2cu0_A 16 TFDDVLLIPQATEVEPKDVDVSTRITPNVKLNIPILSAAMDT 57 (486)
T ss_dssp CGGGEEECCCCCSSCSTTCBCCEEEETTEEESSSEEECCCTT
T ss_pred CccCEEEcCCcCCCCcceEEEEeeecCCcccccceEEcccee
Confidence 3899999998655 4468999999865 68899999999763
No 96
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=83.06 E-value=11 Score=30.96 Aligned_cols=36 Identities=11% Similarity=0.118 Sum_probs=30.7
Q ss_pred CCCHHHHHHHHHhCCCCEEEEccCCHHHHHHHhhCC
Q 025657 214 SLNWKDVKWLQTITSLPILVKGVLTAEDGSKLLSKE 249 (249)
Q Consensus 214 ~~tW~dl~wlr~~~~lPivlKGIl~~eDA~~A~~~~ 249 (249)
..+|+.++++++..+.||++=|=.+++++..++++|
T Consensus 150 ~~~~~~l~~~~~~~~~pvia~GGI~~~nv~~~~~~G 185 (221)
T 1yad_A 150 GRGVSLLSDIKQRISIPVIAIGGMTPDRLRDVKQAG 185 (221)
T ss_dssp -CHHHHHHHHHHHCCSCEEEESSCCGGGHHHHHHTT
T ss_pred CCCHHHHHHHHHhCCCCEEEECCCCHHHHHHHHHcC
Confidence 568999999999889999987744999999998876
No 97
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=83.06 E-value=2.2 Score=39.16 Aligned_cols=85 Identities=14% Similarity=0.097 Sum_probs=55.8
Q ss_pred CCHHHHHh---cCCCceeEEEccccChHHHHHHHHHHHHcCCcEEEEeecCCCCCCchhhhhccCCCCCccccccccccc
Q 025657 115 SSVEEVSS---TGPGIRFFQLYVTKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLY 191 (249)
Q Consensus 115 ~sleeia~---~~~~~~wfQlY~~~d~~~~~~li~rA~~aG~~alvvTvD~p~~g~Re~d~r~~~~~p~~~~~~~~~~~~ 191 (249)
.+.++|.+ ..+.+.++... .+ .+..++++++|+.+|+|. ..|.|. ..
T Consensus 239 ~~~~~i~~lr~~~~~PvivKgv--~~----~e~A~~a~~aGad~I~vs----~~ggr~------~~-------------- 288 (392)
T 2nzl_A 239 ISWEDIKWLRRLTSLPIVAKGI--LR----GDDAREAVKHGLNGILVS----NHGARQ------LD-------------- 288 (392)
T ss_dssp CCHHHHHHHC--CCSCEEEEEE--CC----HHHHHHHHHTTCCEEEEC----CGGGTS------ST--------------
T ss_pred HHHHHHHHHHHhhCCCEEEEec--CC----HHHHHHHHHcCCCEEEeC----CCCCCc------CC--------------
Confidence 45666654 33456777753 22 355788999999999872 111110 00
Q ss_pred cCCCCCCCCchhhhHhhhhcCCCCCHHHHHHHHHhC--CCCEEE-EccCCHHHHHHHhhCC
Q 025657 192 IGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTIT--SLPILV-KGVLTAEDGSKLLSKE 249 (249)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~tW~dl~wlr~~~--~lPivl-KGIl~~eDA~~A~~~~ 249 (249)
...-+|+-|..+++.. +.||+. =||.+++|+.+|+..|
T Consensus 289 --------------------~g~~~~~~l~~v~~av~~~ipVia~GGI~~g~Dv~kalalG 329 (392)
T 2nzl_A 289 --------------------GVPATIDVLPEIVEAVEGKVEVFLDGGVRKGTDVLKALALG 329 (392)
T ss_dssp --------------------TCCCHHHHHHHHHHHHTTSSEEEECSSCCSHHHHHHHHHTT
T ss_pred --------------------CCcChHHHHHHHHHHcCCCCEEEEECCCCCHHHHHHHHHhC
Confidence 0134677888888876 488887 5799999999999876
No 98
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=83.03 E-value=2.4 Score=38.66 Aligned_cols=34 Identities=21% Similarity=0.170 Sum_probs=29.6
Q ss_pred CHHHHHHHHHhCCCCEEE-EccCCHHHHHHHhhCC
Q 025657 216 NWKDVKWLQTITSLPILV-KGVLTAEDGSKLLSKE 249 (249)
Q Consensus 216 tW~dl~wlr~~~~lPivl-KGIl~~eDA~~A~~~~ 249 (249)
+|+-+..+++..+.||+. =||.+++|+.+++..|
T Consensus 266 ~~~~l~~v~~~~~~pVia~GGI~~~~dv~kal~~G 300 (380)
T 1p4c_A 266 PMEVLAQSVAKTGKPVLIDSGFRRGSDIVKALALG 300 (380)
T ss_dssp GGGTHHHHHHHHCSCEEECSSCCSHHHHHHHHHTT
T ss_pred HHHHHHHHHHHcCCeEEEECCCCCHHHHHHHHHhC
Confidence 678888999888889998 5699999999999876
No 99
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=82.98 E-value=24 Score=31.11 Aligned_cols=21 Identities=14% Similarity=0.344 Sum_probs=17.1
Q ss_pred eeecCcccccceeeccccccc
Q 025657 66 TTVLGFNISMPIMIAPTAFQK 86 (249)
Q Consensus 66 t~llG~~~~~Pi~iaP~g~~~ 86 (249)
.+|-|.++.-+|++|||+...
T Consensus 9 ~~ig~~~l~NRiv~aPm~~~~ 29 (338)
T 1z41_A 9 ITIKDMTLKNRIVMSPMCMYS 29 (338)
T ss_dssp EEETTEEESSSEEECCCCCCC
T ss_pred eeECCEEEcCccEECCcCCCc
Confidence 567778899999999988553
No 100
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=82.55 E-value=8.8 Score=35.29 Aligned_cols=110 Identities=16% Similarity=0.173 Sum_probs=64.1
Q ss_pred HHHHHHHHhcCCcEEe--cCCCCCC---HHHHH---hcCCCceeE-EEccccChHHHHHHHHHHHHcCCcEEEEeecCCC
Q 025657 94 CATARAASAAGTIMTL--SSWATSS---VEEVS---STGPGIRFF-QLYVTKHRNVDAQLVKRAERAGFKAIALTVDTPR 164 (249)
Q Consensus 94 ~~~AraA~~~gi~~~l--ss~ss~s---leeia---~~~~~~~wf-QlY~~~d~~~~~~li~rA~~aG~~alvvTvD~p~ 164 (249)
...++++.++|+.+++ ++.. .| ++.|. +..+.+.+. .+ .+.+..++++++|+.+|++..-
T Consensus 146 ~e~~~~lveaGvdvIvldta~G-~~~~~~e~I~~ik~~~~i~Vi~g~V-------~t~e~A~~a~~aGAD~I~vG~g--- 214 (400)
T 3ffs_A 146 IERAKLLVEAGVDVIVLDSAHG-HSLNIIRTLKEIKSKMNIDVIVGNV-------VTEEATKELIENGADGIKVGIG--- 214 (400)
T ss_dssp CHHHHHHHHHTCSEEEECCSCC-SBHHHHHHHHHHHTTCCCEEEEEEE-------CSHHHHHHHHHTTCSEEEECC----
T ss_pred HHHHHHHHHcCCCEEEEeCCCC-CcccHHHHHHHHHhcCCCeEEEeec-------CCHHHHHHHHHcCCCEEEEeCC---
Confidence 5778899999999886 2333 23 34443 333323332 23 2345667888999999998432
Q ss_pred CCCchhhhhccCCCCCccccccccccccCCCCCCCCchhhhHhhhhcCCCCCHHHHHHHHHh---CCCCEEEE-ccCCHH
Q 025657 165 LGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTI---TSLPILVK-GVLTAE 240 (249)
Q Consensus 165 ~g~Re~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tW~dl~wlr~~---~~lPivlK-GIl~~e 240 (249)
.|.+.. . +.+.+. ..-+|+-+.++++. .+.|||.= ||.+++
T Consensus 215 ~Gs~~~-----t--------r~~~g~----------------------g~p~~~al~~v~~~~~~~~IPVIA~GGI~~~~ 259 (400)
T 3ffs_A 215 PGSICT-----T--------RIVAGV----------------------GVPQITAIEKCSSVASKFGIPIIADGGIRYSG 259 (400)
T ss_dssp ---------------------CCSCB----------------------CCCHHHHHHHHHHHHTTTTCCEEEESCCCSHH
T ss_pred CCcCcc-----c--------cccccc----------------------chhHHHHHHHHHHHHHhcCCCEEecCCCCCHH
Confidence 121100 0 000000 01235566666653 68999886 799999
Q ss_pred HHHHHhhCC
Q 025657 241 DGSKLLSKE 249 (249)
Q Consensus 241 DA~~A~~~~ 249 (249)
|+.+|+..|
T Consensus 260 di~kalalG 268 (400)
T 3ffs_A 260 DIGKALAVG 268 (400)
T ss_dssp HHHHHHTTT
T ss_pred HHHHHHHcC
Confidence 999999876
No 101
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=82.54 E-value=2 Score=37.38 Aligned_cols=33 Identities=12% Similarity=-0.040 Sum_probs=24.0
Q ss_pred HHHHHHHHHhC--CCCEEE-EccCCHHHHHHHhhCC
Q 025657 217 WKDVKWLQTIT--SLPILV-KGVLTAEDGSKLLSKE 249 (249)
Q Consensus 217 W~dl~wlr~~~--~lPivl-KGIl~~eDA~~A~~~~ 249 (249)
.+.+..|++.. +.|+|. =||.++||+..+.++|
T Consensus 200 l~~~~~l~~~v~~~~pvVaegGI~t~edv~~l~~~G 235 (272)
T 3qja_A 200 RDCFARIAPGLPSSVIRIAESGVRGTADLLAYAGAG 235 (272)
T ss_dssp TTHHHHHGGGSCTTSEEEEESCCCSHHHHHHHHHTT
T ss_pred HHHHHHHHHhCcccCEEEEECCCCCHHHHHHHHHcC
Confidence 35567777776 567665 4688899999888876
No 102
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=82.29 E-value=2.9 Score=34.98 Aligned_cols=34 Identities=18% Similarity=0.079 Sum_probs=28.8
Q ss_pred CCHHHHHHHHHhCCCCEEEE-ccCCHHHHHHHhhCC
Q 025657 215 LNWKDVKWLQTITSLPILVK-GVLTAEDGSKLLSKE 249 (249)
Q Consensus 215 ~tW~dl~wlr~~~~lPivlK-GIl~~eDA~~A~~~~ 249 (249)
.+|+.++.++ ..+.||+++ ||-+++|+..+++.|
T Consensus 61 ~~~~~i~~i~-~~~ipvi~~Ggi~~~~~~~~~~~~G 95 (241)
T 1qo2_A 61 ENLPVLEKLS-EFAEHIQIGGGIRSLDYAEKLRKLG 95 (241)
T ss_dssp TTHHHHHHGG-GGGGGEEEESSCCSHHHHHHHHHTT
T ss_pred hhHHHHHHHH-hcCCcEEEECCCCCHHHHHHHHHCC
Confidence 4578888898 889999997 577899999998876
No 103
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=82.14 E-value=5.2 Score=33.31 Aligned_cols=35 Identities=20% Similarity=0.221 Sum_probs=30.9
Q ss_pred CCCHHHHHHHHHhCCCCEEEEc-cCCHHHHHHHhhC
Q 025657 214 SLNWKDVKWLQTITSLPILVKG-VLTAEDGSKLLSK 248 (249)
Q Consensus 214 ~~tW~dl~wlr~~~~lPivlKG-Il~~eDA~~A~~~ 248 (249)
..+|+.++.+++..+.||+.=| |-+++|+.++.++
T Consensus 176 g~~~~~~~~i~~~~~ipvia~GGI~~~~d~~~~~~~ 211 (244)
T 1vzw_A 176 GPNLELLKNVCAATDRPVVASGGVSSLDDLRAIAGL 211 (244)
T ss_dssp CCCHHHHHHHHHTCSSCEEEESCCCSHHHHHHHHTT
T ss_pred CCCHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHhh
Confidence 4589999999999999999965 7779999999887
No 104
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=82.09 E-value=18 Score=29.70 Aligned_cols=112 Identities=13% Similarity=0.117 Sum_probs=65.1
Q ss_pred cCCChh-h-HHHHHHHHhcCCcEEecCCCCCCHHHHHhcCCCceeEE----------EccccChHHHHHHHHHHHHcCCc
Q 025657 87 MAHPEG-E-CATARAASAAGTIMTLSSWATSSVEEVSSTGPGIRFFQ----------LYVTKHRNVDAQLVKRAERAGFK 154 (249)
Q Consensus 87 l~h~~g-E-~~~AraA~~~gi~~~lss~ss~sleeia~~~~~~~wfQ----------lY~~~d~~~~~~li~rA~~aG~~ 154 (249)
+.++++ + ..+|+++.+.|+..+--. +..-++.|++... .+++- +|+.. ..+.++++.++|+.
T Consensus 30 ~~~~~~~~~~~~a~~~~~~G~~~i~~~-~~~~i~~i~~~~~-~p~i~~~~~~~~~~~~~i~~----~~~~i~~~~~~Gad 103 (234)
T 1yxy_A 30 LYSETGGIMPLMAKAAQEAGAVGIRAN-SVRDIKEIQAITD-LPIIGIIKKDYPPQEPFITA----TMTEVDQLAALNIA 103 (234)
T ss_dssp TCCTTCCSHHHHHHHHHHHTCSEEEEE-SHHHHHHHHTTCC-SCEEEECBCCCTTSCCCBSC----SHHHHHHHHTTTCS
T ss_pred CcCCccchHHHHHHHHHHCCCcEeecC-CHHHHHHHHHhCC-CCEEeeEcCCCCccccccCC----hHHHHHHHHHcCCC
Confidence 444552 3 489999999998765321 1122344444332 33332 22222 23567888899999
Q ss_pred EEEEeecCCCCCCchhhhhccCCCCCccccccccccccCCCCCCCCchhhhHhhhhcCCCCCHHHHHHHHHhCCCCEEEE
Q 025657 155 AIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVK 234 (249)
Q Consensus 155 alvvTvD~p~~g~Re~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tW~dl~wlr~~~~lPivlK 234 (249)
.+.+...... -|. .....+.++.+|+.++.-.++-
T Consensus 104 ~V~l~~~~~~-------------~~~--------------------------------~~~~~~~i~~i~~~~~~~~v~~ 138 (234)
T 1yxy_A 104 VIAMDCTKRD-------------RHD--------------------------------GLDIASFIRQVKEKYPNQLLMA 138 (234)
T ss_dssp EEEEECCSSC-------------CTT--------------------------------CCCHHHHHHHHHHHCTTCEEEE
T ss_pred EEEEcccccC-------------CCC--------------------------------CccHHHHHHHHHHhCCCCeEEE
Confidence 8765543210 010 0011356788888885555666
Q ss_pred ccCCHHHHHHHhhCC
Q 025657 235 GVLTAEDGSKLLSKE 249 (249)
Q Consensus 235 GIl~~eDA~~A~~~~ 249 (249)
++.++++|+.|.+.|
T Consensus 139 ~~~t~~ea~~a~~~G 153 (234)
T 1yxy_A 139 DISTFDEGLVAHQAG 153 (234)
T ss_dssp ECSSHHHHHHHHHTT
T ss_pred eCCCHHHHHHHHHcC
Confidence 899999999998876
No 105
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=81.96 E-value=4.9 Score=34.01 Aligned_cols=70 Identities=16% Similarity=0.132 Sum_probs=52.5
Q ss_pred eEEEccccChHHHHHHHHHHHHcCCcEEEEeecCCCCCCchhhhhccCCCCCccccccccccccCCCCCCCCchhhhHhh
Q 025657 129 FFQLYVTKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVA 208 (249)
Q Consensus 129 wfQlY~~~d~~~~~~li~rA~~aG~~alvvTvD~p~~g~Re~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (249)
-+-+....|.+....+.+.+.+.|++.|=||..+|..
T Consensus 15 vi~Vir~~~~~~a~~~a~al~~gGi~~iEvt~~t~~a------------------------------------------- 51 (217)
T 3lab_A 15 LIPVIVIDDLVHAIPMAKALVAGGVHLLEVTLRTEAG------------------------------------------- 51 (217)
T ss_dssp EEEEECCSCGGGHHHHHHHHHHTTCCEEEEETTSTTH-------------------------------------------
T ss_pred EEEEEEcCCHHHHHHHHHHHHHcCCCEEEEeCCCccH-------------------------------------------
Confidence 4445455678888899999999999999998876431
Q ss_pred hhcCCCCCHHHHHHHHHhCCCCEEE-EccCCHHHHHHHhhCC
Q 025657 209 NQIDRSLNWKDVKWLQTITSLPILV-KGVLTAEDGSKLLSKE 249 (249)
Q Consensus 209 ~~~~~~~tW~dl~wlr~~~~lPivl-KGIl~~eDA~~A~~~~ 249 (249)
-+.|+.|++..+.++|= =-|+++|+|+.|+++|
T Consensus 52 --------~~~I~~l~~~~p~~~IGAGTVlt~~~a~~ai~AG 85 (217)
T 3lab_A 52 --------LAAISAIKKAVPEAIVGAGTVCTADDFQKAIDAG 85 (217)
T ss_dssp --------HHHHHHHHHHCTTSEEEEECCCSHHHHHHHHHHT
T ss_pred --------HHHHHHHHHHCCCCeEeeccccCHHHHHHHHHcC
Confidence 14678888887655553 3489999999999887
No 106
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=81.58 E-value=0.7 Score=40.37 Aligned_cols=80 Identities=19% Similarity=0.321 Sum_probs=48.0
Q ss_pred HHHHHhcCCCceeEEEccccChHHHHHHHHHHHHcCCcEEEEeecCCCCCCchhhhhccCCCCCccccccccccccCCCC
Q 025657 117 VEEVSSTGPGIRFFQLYVTKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMD 196 (249)
Q Consensus 117 leeia~~~~~~~wfQlY~~~d~~~~~~li~rA~~aG~~alvvTvD~p~~g~Re~d~r~~~~~p~~~~~~~~~~~~~~~~~ 196 (249)
|.||+++.|..-++.- .....++.+..+++|+.+|=|..|... | .+
T Consensus 55 IaE~K~asPs~g~i~~-----~~~p~~~A~~y~~~GA~~isvltd~~~-----------f-----------~G------- 100 (272)
T 3qja_A 55 IAEVKRASPSAGALAT-----IADPAKLAQAYQDGGARIVSVVTEQRR-----------F-----------QG------- 100 (272)
T ss_dssp EEEEC------------------CHHHHHHHHHHTTCSEEEEECCGGG-----------H-----------HH-------
T ss_pred EEEEecCCCCCCccCC-----CCCHHHHHHHHHHcCCCEEEEecChhh-----------c-----------CC-------
Confidence 5677766664444422 122346677788899999977666311 0 00
Q ss_pred CCCCchhhhHhhhhcCCCCCHHHHHHHHHhCCCCEEEEc-cCCHHHHHHHhhCC
Q 025657 197 KTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKG-VLTAEDGSKLLSKE 249 (249)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~tW~dl~wlr~~~~lPivlKG-Il~~eDA~~A~~~~ 249 (249)
+.++|+.+|+..++||+.|+ |.++.+...|.++|
T Consensus 101 -------------------s~~~l~~ir~~v~lPvl~kdfiid~~qv~~A~~~G 135 (272)
T 3qja_A 101 -------------------SLDDLDAVRASVSIPVLRKDFVVQPYQIHEARAHG 135 (272)
T ss_dssp -------------------HHHHHHHHHHHCSSCEEEESCCCSHHHHHHHHHTT
T ss_pred -------------------CHHHHHHHHHhCCCCEEECccccCHHHHHHHHHcC
Confidence 23688999999999999996 66666788888776
No 107
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=80.63 E-value=12 Score=32.46 Aligned_cols=81 Identities=19% Similarity=0.148 Sum_probs=50.5
Q ss_pred ceeeccccccccCCChhhHHHHHHHHhcCCcE--EecCCC---CCCHHHH-------HhcCCCceeEEEccccChHHHHH
Q 025657 76 PIMIAPTAFQKMAHPEGECATARAASAAGTIM--TLSSWA---TSSVEEV-------SSTGPGIRFFQLYVTKHRNVDAQ 143 (249)
Q Consensus 76 Pi~iaP~g~~~l~h~~gE~~~AraA~~~gi~~--~lss~s---s~sleei-------a~~~~~~~wfQlY~~~d~~~~~~ 143 (249)
|.++.|+. .+-++.++=..+++-.-+.|+-- +.||.+ +.|.||= .+...+ .+...- ..+-..+.+
T Consensus 5 ~a~vTPf~-dg~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g-vi~Gvg-~~~t~~ai~ 81 (286)
T 2r91_A 5 APVITTFR-GGRLDPELFANHVKNITSKGVDVVFVAGTTGLGPALSLQEKMELTDAATSAARR-VIVQVA-SLNADEAIA 81 (286)
T ss_dssp EECCCCEE-TTEECHHHHHHHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHHHHCSS-EEEECC-CSSHHHHHH
T ss_pred EeEecCcC-CCccCHHHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC-EEEeeC-CCCHHHHHH
Confidence 55667766 55445555556777666778744 455543 3455543 223344 444442 224567779
Q ss_pred HHHHHHHcCCcEEEEe
Q 025657 144 LVKRAERAGFKAIALT 159 (249)
Q Consensus 144 li~rA~~aG~~alvvT 159 (249)
+.++|+++|+.++++.
T Consensus 82 la~~A~~~Gadavlv~ 97 (286)
T 2r91_A 82 LAKYAESRGAEAVASL 97 (286)
T ss_dssp HHHHHHHTTCSEEEEC
T ss_pred HHHHHHhcCCCEEEEc
Confidence 9999999999999886
No 108
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=80.17 E-value=19 Score=33.93 Aligned_cols=112 Identities=15% Similarity=0.089 Sum_probs=62.8
Q ss_pred hHHHHHHHHhcCCcEEecCCCCC-------CHHHHHhcCCC-ceeE-EEccccChHHHHHHHHHHHHcCCcEEEEeecCC
Q 025657 93 ECATARAASAAGTIMTLSSWATS-------SVEEVSSTGPG-IRFF-QLYVTKHRNVDAQLVKRAERAGFKAIALTVDTP 163 (249)
Q Consensus 93 E~~~AraA~~~gi~~~lss~ss~-------sleeia~~~~~-~~wf-QlY~~~d~~~~~~li~rA~~aG~~alvvTvD~p 163 (249)
....+++..++|+-.+.=+.+.. -++++++..++ +.+. .+ . +.+..+++.++|+++|+|....-
T Consensus 257 ~~era~aLveaGvd~I~Id~a~g~~~~v~~~i~~i~~~~~~~~vi~g~v---~----t~e~a~~~~~aGad~i~vg~g~g 329 (511)
T 3usb_A 257 AMTRIDALVKASVDAIVLDTAHGHSQGVIDKVKEVRAKYPSLNIIAGNV---A----TAEATKALIEAGANVVKVGIGPG 329 (511)
T ss_dssp HHHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHHCTTSEEEEEEE---C----SHHHHHHHHHHTCSEEEECSSCS
T ss_pred hHHHHHHHHhhccceEEecccccchhhhhhHHHHHHHhCCCceEEeeee---c----cHHHHHHHHHhCCCEEEECCCCc
Confidence 35667777888887764332222 24455555553 3332 22 1 33456778899999998733211
Q ss_pred CCCCchhhhhccCCCCCccccccccccccCCCCCCCCchhhhHhhhhcCCCCCHHHHHH---HHHhCCCCEEE-EccCCH
Q 025657 164 RLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKW---LQTITSLPILV-KGVLTA 239 (249)
Q Consensus 164 ~~g~Re~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tW~dl~w---lr~~~~lPivl-KGIl~~ 239 (249)
. ........++. .-+++.+.. ..+..+.|||. =||.++
T Consensus 330 s--i~~~~~~~g~g------------------------------------~p~~~~l~~v~~~~~~~~iPVIa~GGI~~~ 371 (511)
T 3usb_A 330 S--ICTTRVVAGVG------------------------------------VPQLTAVYDCATEARKHGIPVIADGGIKYS 371 (511)
T ss_dssp T--TCCHHHHHCCC------------------------------------CCHHHHHHHHHHHHHTTTCCEEEESCCCSH
T ss_pred c--ccccccccCCC------------------------------------CCcHHHHHHHHHHHHhCCCcEEEeCCCCCH
Confidence 0 00000001111 112333333 44556899998 589999
Q ss_pred HHHHHHhhCC
Q 025657 240 EDGSKLLSKE 249 (249)
Q Consensus 240 eDA~~A~~~~ 249 (249)
+|+.+|+..|
T Consensus 372 ~di~kala~G 381 (511)
T 3usb_A 372 GDMVKALAAG 381 (511)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHHHHHhC
Confidence 9999999876
No 109
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=79.77 E-value=8.5 Score=34.95 Aligned_cols=31 Identities=13% Similarity=0.131 Sum_probs=27.7
Q ss_pred HHHHHHHHhCCCCEEEEccCCHHHHHHHhhCC
Q 025657 218 KDVKWLQTITSLPILVKGVLTAEDGSKLLSKE 249 (249)
Q Consensus 218 ~dl~wlr~~~~lPivlKGIl~~eDA~~A~~~~ 249 (249)
+ ++++|+.++.||+.=|=.+++||+.+++.|
T Consensus 298 ~-~~~ir~~~~iPvi~~G~it~~~a~~~l~~g 328 (379)
T 3aty_A 298 V-VAWVRGSYSGVKISNLRYDFEEADQQIREG 328 (379)
T ss_dssp H-HHHHHTTCCSCEEEESSCCHHHHHHHHHTT
T ss_pred H-HHHHHHHCCCcEEEECCCCHHHHHHHHHcC
Confidence 6 899999999999988766999999999875
No 110
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=79.68 E-value=1.9 Score=36.45 Aligned_cols=35 Identities=31% Similarity=0.181 Sum_probs=26.4
Q ss_pred CCCCHHHHHHHHHhCCCCEEEEccCCHHHHHHHhhCC
Q 025657 213 RSLNWKDVKWLQTITSLPILVKGVLTAEDGSKLLSKE 249 (249)
Q Consensus 213 ~~~tW~dl~wlr~~~~lPivlKGIl~~eDA~~A~~~~ 249 (249)
|..+-+-++..|+ .+.|+++ |+.|++++.+|.+.|
T Consensus 96 p~~d~~v~~~ar~-~g~~~i~-Gv~t~~e~~~A~~~G 130 (224)
T 1vhc_A 96 PGLNPKIVKLCQD-LNFPITP-GVNNPMAIEIALEMG 130 (224)
T ss_dssp SSCCHHHHHHHHH-TTCCEEC-EECSHHHHHHHHHTT
T ss_pred CCCCHHHHHHHHH-hCCCEEe-ccCCHHHHHHHHHCC
Confidence 3444444666676 7778777 999999999999876
No 111
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=79.50 E-value=24 Score=31.94 Aligned_cols=34 Identities=15% Similarity=0.189 Sum_probs=25.9
Q ss_pred CHHHHHHHHH---hCCCCEEEE-ccCCHHHHHHHhhCC
Q 025657 216 NWKDVKWLQT---ITSLPILVK-GVLTAEDGSKLLSKE 249 (249)
Q Consensus 216 tW~dl~wlr~---~~~lPivlK-GIl~~eDA~~A~~~~ 249 (249)
+++.|.++++ ..+.|||.= ||.+++|+.+|+..|
T Consensus 196 ~~~~l~~v~~~~~~~~iPVIA~GGI~~~~di~kala~G 233 (366)
T 4fo4_A 196 QITAIADAAGVANEYGIPVIADGGIRFSGDISKAIAAG 233 (366)
T ss_dssp HHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHHHHHTT
T ss_pred hHHHHHHHHHHHhhcCCeEEEeCCCCCHHHHHHHHHcC
Confidence 3455555554 578998875 888999999999876
No 112
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=79.40 E-value=1.8 Score=36.30 Aligned_cols=32 Identities=6% Similarity=0.091 Sum_probs=28.7
Q ss_pred HHHHHHHHhCCCCEEEE-ccCCHHHHHHHhhCC
Q 025657 218 KDVKWLQTITSLPILVK-GVLTAEDGSKLLSKE 249 (249)
Q Consensus 218 ~dl~wlr~~~~lPivlK-GIl~~eDA~~A~~~~ 249 (249)
+.++.+++.++.||+++ ||-+++|+..++++|
T Consensus 65 ~~i~~i~~~~~ipv~v~ggI~~~~~~~~~l~~G 97 (244)
T 1vzw_A 65 ALIAEVAQAMDIKVELSGGIRDDDTLAAALATG 97 (244)
T ss_dssp HHHHHHHHHCSSEEEEESSCCSHHHHHHHHHTT
T ss_pred HHHHHHHHhcCCcEEEECCcCCHHHHHHHHHcC
Confidence 67899999999999998 588999999998876
No 113
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=79.23 E-value=1.8 Score=35.27 Aligned_cols=107 Identities=10% Similarity=0.078 Sum_probs=56.5
Q ss_pred ccChHHHHHHHHHHHHcCCcEEEEeecCCCCCCchhhhhccCCCCCccccccccccccCCCCCCCCchhhhHhhhhcCCC
Q 025657 135 TKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRS 214 (249)
Q Consensus 135 ~~d~~~~~~li~rA~~aG~~alvvTvD~p~~g~Re~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (249)
..|.+...++++.+.++|+..|-++..++..-.--+.+|..+.-...+.......... .... ......++ +.+.
T Consensus 18 ~~~~~~~~~~~~~~~~~G~~~iev~~~~~~~~~~i~~ir~~~~~~~~ig~~~v~~~~~--~~~a-~~~Gad~i---v~~~ 91 (205)
T 1wa3_A 18 ANSVEEAKEKALAVFEGGVHLIEITFTVPDADTVIKELSFLKEKGAIIGAGTVTSVEQ--CRKA-VESGAEFI---VSPH 91 (205)
T ss_dssp CSSHHHHHHHHHHHHHTTCCEEEEETTSTTHHHHHHHTHHHHHTTCEEEEESCCSHHH--HHHH-HHHTCSEE---ECSS
T ss_pred cCCHHHHHHHHHHHHHCCCCEEEEeCCChhHHHHHHHHHHHCCCCcEEEecccCCHHH--HHHH-HHcCCCEE---EcCC
Confidence 3467778889999999999999888887532111233444321000000000000000 0000 00000111 2344
Q ss_pred CCHHHHHHHHHhCCCCEEEEccCCHHHHHHHhhCC
Q 025657 215 LNWKDVKWLQTITSLPILVKGVLTAEDGSKLLSKE 249 (249)
Q Consensus 215 ~tW~dl~wlr~~~~lPivlKGIl~~eDA~~A~~~~ 249 (249)
++ .++-...+.++.|++. |+++++|+++|.+.|
T Consensus 92 ~~-~~~~~~~~~~g~~vi~-g~~t~~e~~~a~~~G 124 (205)
T 1wa3_A 92 LD-EEISQFCKEKGVFYMP-GVMTPTELVKAMKLG 124 (205)
T ss_dssp CC-HHHHHHHHHHTCEEEC-EECSHHHHHHHHHTT
T ss_pred CC-HHHHHHHHHcCCcEEC-CcCCHHHHHHHHHcC
Confidence 44 3343444457999988 999999999999876
No 114
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=79.16 E-value=5.7 Score=35.09 Aligned_cols=34 Identities=12% Similarity=0.079 Sum_probs=29.8
Q ss_pred CHHHHHHHHHhCCCCEEEE-ccCCHHHHHHHhhCC
Q 025657 216 NWKDVKWLQTITSLPILVK-GVLTAEDGSKLLSKE 249 (249)
Q Consensus 216 tW~dl~wlr~~~~lPivlK-GIl~~eDA~~A~~~~ 249 (249)
+.++|+.+|+...+||+.| +|-+.++++.+.++|
T Consensus 66 ~~~~i~~i~~~v~iPvl~k~~i~~ide~qil~aaG 100 (297)
T 4adt_A 66 DPLKIEEIRKCISINVLAKVRIGHFVEAQILEELK 100 (297)
T ss_dssp CHHHHHHHHTTCCSEEEEEEETTCHHHHHHHHHTT
T ss_pred CHHHHHHHHHhcCCCEEEeccCCcHHHHHHHHHcC
Confidence 5689999999999999999 677799998888776
No 115
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=79.11 E-value=7.1 Score=31.79 Aligned_cols=32 Identities=16% Similarity=0.085 Sum_probs=24.0
Q ss_pred HHHHHHHHhC-----CCCEEEEccCCHHHHHHHhhCC
Q 025657 218 KDVKWLQTIT-----SLPILVKGVLTAEDGSKLLSKE 249 (249)
Q Consensus 218 ~dl~wlr~~~-----~lPivlKGIl~~eDA~~A~~~~ 249 (249)
+.++.+|+.. +.|+++=|=.+++++..+.++|
T Consensus 155 ~~i~~~~~~~~~~~~~~~i~v~GGI~~~~~~~~~~~G 191 (220)
T 2fli_A 155 EKVATVAKWRDEKGLSFDIEVDGGVDNKTIRACYEAG 191 (220)
T ss_dssp HHHHHHHHHHHHTTCCCEEEEESSCCTTTHHHHHHHT
T ss_pred HHHHHHHHHHHhcCCCceEEEECcCCHHHHHHHHHcC
Confidence 5677888766 7898776666689988887765
No 116
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=78.85 E-value=14 Score=29.71 Aligned_cols=36 Identities=8% Similarity=0.320 Sum_probs=31.2
Q ss_pred CCCHHHHHHHHHhCCCCEEEEccCCHHHHHHHhhCC
Q 025657 214 SLNWKDVKWLQTITSLPILVKGVLTAEDGSKLLSKE 249 (249)
Q Consensus 214 ~~tW~dl~wlr~~~~lPivlKGIl~~eDA~~A~~~~ 249 (249)
..+|+.++++++..+.|+++=|=.++|++..+++.|
T Consensus 148 ~~~~~~l~~l~~~~~~pvia~GGI~~~nv~~~~~~G 183 (215)
T 1xi3_A 148 VIGLEGLRKIVESVKIPVVAIGGINKDNAREVLKTG 183 (215)
T ss_dssp CCHHHHHHHHHHHCSSCEEEESSCCTTTHHHHHTTT
T ss_pred CcCHHHHHHHHHhCCCCEEEECCcCHHHHHHHHHcC
Confidence 568999999999999999998866699999988765
No 117
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=78.52 E-value=12 Score=31.84 Aligned_cols=36 Identities=14% Similarity=0.127 Sum_probs=30.6
Q ss_pred CCCHHHHHHHHHh--CCCCEEEEccCCHHHHHHHhhCC
Q 025657 214 SLNWKDVKWLQTI--TSLPILVKGVLTAEDGSKLLSKE 249 (249)
Q Consensus 214 ~~tW~dl~wlr~~--~~lPivlKGIl~~eDA~~A~~~~ 249 (249)
..+|+.++|+++. .+.|++.=|=.+++++..++++|
T Consensus 175 ~~gl~~l~~~~~~~~~~iPvvAiGGI~~~ni~~~~~aG 212 (243)
T 3o63_A 175 APGLGLVRVAAELGGDDKPWFAIGGINAQRLPAVLDAG 212 (243)
T ss_dssp CCCHHHHHHHHTC---CCCEEEESSCCTTTHHHHHHTT
T ss_pred hhhHHHHHHHHHhccCCCCEEEecCCCHHHHHHHHHcC
Confidence 5789999999987 58999988766999999998876
No 118
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=78.28 E-value=17 Score=31.52 Aligned_cols=82 Identities=16% Similarity=0.073 Sum_probs=49.2
Q ss_pred ceeeccccccccCCChhhHHHHHHHHhcCCcE--EecCCC---CCCHHHHH-------hcCCCceeEEEccccChHHHHH
Q 025657 76 PIMIAPTAFQKMAHPEGECATARAASAAGTIM--TLSSWA---TSSVEEVS-------STGPGIRFFQLYVTKHRNVDAQ 143 (249)
Q Consensus 76 Pi~iaP~g~~~l~h~~gE~~~AraA~~~gi~~--~lss~s---s~sleeia-------~~~~~~~wfQlY~~~d~~~~~~ 143 (249)
|.++.|+.-.+-++.++=..+++---+.|+-- +.||.+ +.|.||-. +...+ .+...- ..+-+.+.+
T Consensus 5 ~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~g-ViaGvg-~~~t~~ai~ 82 (288)
T 2nuw_A 5 SPIITPFDKQGKVNVDALKTHAKNLLEKGIDAIFVNGTTGLGPALSKDEKRQNLNALYDVTHK-LIFQVG-SLNLNDVME 82 (288)
T ss_dssp EECCCCBCTTSCBCHHHHHHHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHTTTCSC-EEEECC-CSCHHHHHH
T ss_pred EeeecCCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC-eEEeeC-CCCHHHHHH
Confidence 45566754333334444446677666778744 455543 34655442 22234 444442 124567779
Q ss_pred HHHHHHHcCCcEEEEe
Q 025657 144 LVKRAERAGFKAIALT 159 (249)
Q Consensus 144 li~rA~~aG~~alvvT 159 (249)
+.+.|+++|+.++++.
T Consensus 83 la~~A~~~Gadavlv~ 98 (288)
T 2nuw_A 83 LVKFSNEMDILGVSSH 98 (288)
T ss_dssp HHHHHHTSCCSEEEEC
T ss_pred HHHHHHhcCCCEEEEc
Confidence 9999999999999886
No 119
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=78.02 E-value=2.1 Score=35.47 Aligned_cols=34 Identities=32% Similarity=0.461 Sum_probs=29.5
Q ss_pred CHHHHHHHHHhCCCCEEEEc-cCCHHHHHHHhhCC
Q 025657 216 NWKDVKWLQTITSLPILVKG-VLTAEDGSKLLSKE 249 (249)
Q Consensus 216 tW~dl~wlr~~~~lPivlKG-Il~~eDA~~A~~~~ 249 (249)
.++.++.+++.++.||++.| |.++++++.++++|
T Consensus 65 ~~~~i~~i~~~~~ipvi~~g~i~~~~~~~~~~~~G 99 (253)
T 1h5y_A 65 FIDSVKRVAEAVSIPVLVGGGVRSLEDATTLFRAG 99 (253)
T ss_dssp HHHHHHHHHHHCSSCEEEESSCCSHHHHHHHHHHT
T ss_pred cHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcC
Confidence 35778999999999999986 88999999998876
No 120
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=76.42 E-value=9.7 Score=38.95 Aligned_cols=33 Identities=27% Similarity=0.456 Sum_probs=28.2
Q ss_pred HHHHHHHHHhC-CCCEEEE-ccCCHHHHHHHhhCC
Q 025657 217 WKDVKWLQTIT-SLPILVK-GVLTAEDGSKLLSKE 249 (249)
Q Consensus 217 W~dl~wlr~~~-~lPivlK-GIl~~eDA~~A~~~~ 249 (249)
++-+..+++.. +.|||.= ||.+++||.+++..|
T Consensus 775 ~~~v~~v~~~~~~ipvi~~GGI~s~~da~~~l~~G 809 (1025)
T 1gte_A 775 LRAVTTIARALPGFPILATGGIDSAESGLQFLHSG 809 (1025)
T ss_dssp HHHHHHHHHHSTTCCEEEESSCCSHHHHHHHHHTT
T ss_pred HHHHHHHHHHcCCCCEEEecCcCCHHHHHHHHHcC
Confidence 46788899888 8999865 799999999999876
No 121
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=75.60 E-value=21 Score=29.29 Aligned_cols=81 Identities=15% Similarity=0.093 Sum_probs=45.4
Q ss_pred cceeeccccccccCCChhhHHHHHHHHhcCCcEE-ec-------CCCCCCHHHHH---hcCCCceeEEEccccChHHHHH
Q 025657 75 MPIMIAPTAFQKMAHPEGECATARAASAAGTIMT-LS-------SWATSSVEEVS---STGPGIRFFQLYVTKHRNVDAQ 143 (249)
Q Consensus 75 ~Pi~iaP~g~~~l~h~~gE~~~AraA~~~gi~~~-ls-------s~ss~sleeia---~~~~~~~wfQlY~~~d~~~~~~ 143 (249)
.|+.+.|.=... .++.-...++++.+.|+-++ +. ...+..++.+. +..+.+...-+|+. | ..+
T Consensus 9 ~~~~i~p~i~a~--d~~~~~~~i~~~~~~G~d~i~l~~~dg~f~~~~~~~~~~i~~l~~~~~~~~~v~l~vn-d---~~~ 82 (230)
T 1rpx_A 9 SDIIVSPSILSA--NFSKLGEQVKAIEQAGCDWIHVDVMDGRFVPNITIGPLVVDSLRPITDLPLDVHLMIV-E---PDQ 82 (230)
T ss_dssp TSCEEEEBGGGS--CGGGHHHHHHHHHHTTCCCEEEEEEBSSSSSCBCCCHHHHHHHGGGCCSCEEEEEESS-S---HHH
T ss_pred CceEEEEEeecC--CHHHHHHHHHHHHHCCCCEEEEeeccCCcccccccCHHHHHHHHhccCCcEEEEEEec-C---HHH
Confidence 455566643332 33333456677777775432 22 11234455554 33333455667765 3 336
Q ss_pred HHHHHHHcCCcEEEEeec
Q 025657 144 LVKRAERAGFKAIALTVD 161 (249)
Q Consensus 144 li~rA~~aG~~alvvTvD 161 (249)
.++.+.++|+..+.+..+
T Consensus 83 ~v~~~~~~Gad~v~vh~~ 100 (230)
T 1rpx_A 83 RVPDFIKAGADIVSVHCE 100 (230)
T ss_dssp HHHHHHHTTCSEEEEECS
T ss_pred HHHHHHHcCCCEEEEEec
Confidence 778888899999988877
No 122
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=75.00 E-value=2.6 Score=36.82 Aligned_cols=32 Identities=16% Similarity=0.214 Sum_probs=28.1
Q ss_pred HHHHHHHHhCCCCEEE-EccCCHHHHHHHhhCC
Q 025657 218 KDVKWLQTITSLPILV-KGVLTAEDGSKLLSKE 249 (249)
Q Consensus 218 ~dl~wlr~~~~lPivl-KGIl~~eDA~~A~~~~ 249 (249)
+.++.+|+.++.|+++ -||-++|+|+++++.|
T Consensus 198 ~~v~~vr~~~~~Pv~vGfGIst~e~~~~~~~~g 230 (271)
T 3nav_A 198 ALLERLQQFDAPPALLGFGISEPAQVKQAIEAG 230 (271)
T ss_dssp HHHHHHHHTTCCCEEECSSCCSHHHHHHHHHTT
T ss_pred HHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcC
Confidence 5689999999999999 8999999999777654
No 123
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A*
Probab=74.47 E-value=3 Score=36.95 Aligned_cols=34 Identities=26% Similarity=0.447 Sum_probs=29.4
Q ss_pred CHHHHHHHHHhC-CCCEEE-EccCCHHHHHHHhhCC
Q 025657 216 NWKDVKWLQTIT-SLPILV-KGVLTAEDGSKLLSKE 249 (249)
Q Consensus 216 tW~dl~wlr~~~-~lPivl-KGIl~~eDA~~A~~~~ 249 (249)
+|+-|..+++.. +.||+. =||.+++|+.+|+..|
T Consensus 243 ~~~~l~~v~~~~~~ipvia~GGI~~~~d~~kal~~G 278 (332)
T 1vcf_A 243 TARAILEVREVLPHLPLVASGGVYTGTDGAKALALG 278 (332)
T ss_dssp HHHHHHHHHHHCSSSCEEEESSCCSHHHHHHHHHHT
T ss_pred HHHHHHHHHHhcCCCeEEEECCCCCHHHHHHHHHhC
Confidence 578889999988 799987 5899999999998765
No 124
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=74.20 E-value=9.2 Score=36.21 Aligned_cols=34 Identities=24% Similarity=0.162 Sum_probs=26.6
Q ss_pred CHHHHHHHHHhC-------CCCEEEE-ccCCHHHHHHHhhCC
Q 025657 216 NWKDVKWLQTIT-------SLPILVK-GVLTAEDGSKLLSKE 249 (249)
Q Consensus 216 tW~dl~wlr~~~-------~lPivlK-GIl~~eDA~~A~~~~ 249 (249)
+|+-|..+++.. +.|||.= ||.+++|+.+|+..|
T Consensus 384 ~~~~l~~v~~~v~~~~~~~~ipVia~GGI~~g~Dv~kaLalG 425 (511)
T 1kbi_A 384 PIEVLAETMPILEQRNLKDKLEVFVDGGVRRGTDVLKALCLG 425 (511)
T ss_dssp HHHHHHHHHHHHHTTTCBTTBEEEEESSCCSHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHhhccCCCcEEEEECCCCCHHHHHHHHHcC
Confidence 466677776654 6888874 799999999999766
No 125
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=74.15 E-value=20 Score=32.46 Aligned_cols=111 Identities=15% Similarity=0.076 Sum_probs=63.4
Q ss_pred hhhHHHHHHHHhcCCcEEecCCC-CCC------HHHHHhcCCC-ceeE-EEccccChHHHHHHHHHHHHcCCcEEEEeec
Q 025657 91 EGECATARAASAAGTIMTLSSWA-TSS------VEEVSSTGPG-IRFF-QLYVTKHRNVDAQLVKRAERAGFKAIALTVD 161 (249)
Q Consensus 91 ~gE~~~AraA~~~gi~~~lss~s-s~s------leeia~~~~~-~~wf-QlY~~~d~~~~~~li~rA~~aG~~alvvTvD 161 (249)
+.....++.+.++|+.++.-..+ ..+ ++.|.+..++ +.+. ++ . +.+..++++++|+.+|.|++-
T Consensus 99 ~~~~e~~~~a~~aGvdvI~id~a~G~~~~~~e~I~~ir~~~~~~~Vi~G~V---~----T~e~A~~a~~aGaD~I~Vg~g 171 (361)
T 3r2g_A 99 ENELQRAEALRDAGADFFCVDVAHAHAKYVGKTLKSLRQLLGSRCIMAGNV---A----TYAGADYLASCGADIIKAGIG 171 (361)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECSCCSSHHHHHHHHHHHHHHTTCEEEEEEE---C----SHHHHHHHHHTTCSEEEECCS
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCCCCcHhHHHHHHHHHHhcCCCeEEEcCc---C----CHHHHHHHHHcCCCEEEEcCC
Confidence 34457889999999877653221 112 3344444343 3343 23 2 334567888999999998432
Q ss_pred CCCCCCchhhhhc--cCCCCCccccccccccccCCCCCCCCchhhhHhhhhcCCCCCHHHHHHHHHhCCCCEEEE-ccCC
Q 025657 162 TPRLGRREADIKN--RFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVK-GVLT 238 (249)
Q Consensus 162 ~p~~g~Re~d~r~--~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tW~dl~wlr~~~~lPivlK-GIl~ 238 (249)
|-+..+-|. ++. .+ +++-|..+++... ||+.= ||.+
T Consensus 172 ----~G~~~~tr~~~g~g-----------------------------------~p-~l~aI~~~~~~~~-PVIAdGGI~~ 210 (361)
T 3r2g_A 172 ----GGSVCSTRIKTGFG-----------------------------------VP-MLTCIQDCSRADR-SIVADGGIKT 210 (361)
T ss_dssp ----SSSCHHHHHHHCCC-----------------------------------CC-HHHHHHHHTTSSS-EEEEESCCCS
T ss_pred ----CCcCccccccCCcc-----------------------------------HH-HHHHHHHHHHhCC-CEEEECCCCC
Confidence 111111110 100 01 3455555555444 88875 7999
Q ss_pred HHHHHHHhhCC
Q 025657 239 AEDGSKLLSKE 249 (249)
Q Consensus 239 ~eDA~~A~~~~ 249 (249)
++|+.+|+..|
T Consensus 211 ~~di~kALa~G 221 (361)
T 3r2g_A 211 SGDIVKALAFG 221 (361)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHHHcC
Confidence 99999999877
No 126
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=73.02 E-value=17 Score=30.51 Aligned_cols=57 Identities=21% Similarity=0.122 Sum_probs=33.9
Q ss_pred HHHHHHHHhcCCcEEecCCCCCCHHHHHh---cCCCcee---EE------EccccChHHHHHHHHHHHHcCCcEEEE
Q 025657 94 CATARAASAAGTIMTLSSWATSSVEEVSS---TGPGIRF---FQ------LYVTKHRNVDAQLVKRAERAGFKAIAL 158 (249)
Q Consensus 94 ~~~AraA~~~gi~~~lss~ss~sleeia~---~~~~~~w---fQ------lY~~~d~~~~~~li~rA~~aG~~alvv 158 (249)
..+|+++.+.|...+ +.. +.++|.+ ...-|.. -. +|+.. +.+.++.+.++|++.+++
T Consensus 39 ~~~A~a~~~~Ga~~i-~~~---~~~~i~~ir~~v~~Pvig~~k~d~~~~~~~I~~----~~~~i~~~~~~Gad~V~l 107 (232)
T 3igs_A 39 AAMALAAEQAGAVAV-RIE---GIDNLRMTRSLVSVPIIGIIKRDLDESPVRITP----FLDDVDALAQAGAAIIAV 107 (232)
T ss_dssp HHHHHHHHHTTCSEE-EEE---SHHHHHHHHTTCCSCEEEECBCCCSSCCCCBSC----SHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHHCCCeEE-EEC---CHHHHHHHHHhcCCCEEEEEeecCCCcceEeCc----cHHHHHHHHHcCCCEEEE
Confidence 489999999999854 332 4666654 3322321 11 22222 224467788999997754
No 127
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=72.79 E-value=18 Score=30.40 Aligned_cols=57 Identities=25% Similarity=0.187 Sum_probs=34.7
Q ss_pred HHHHHHHHhcCCcEEecCCCCCCHHHHHhc---CCCcee---EEE------ccccChHHHHHHHHHHHHcCCcEEEE
Q 025657 94 CATARAASAAGTIMTLSSWATSSVEEVSST---GPGIRF---FQL------YVTKHRNVDAQLVKRAERAGFKAIAL 158 (249)
Q Consensus 94 ~~~AraA~~~gi~~~lss~ss~sleeia~~---~~~~~w---fQl------Y~~~d~~~~~~li~rA~~aG~~alvv 158 (249)
..+|+++.+.|...+-. .+.|+|.+. ..-|.. -+. |+.. +.+.++.+.++|++.+++
T Consensus 39 ~~~A~a~~~~Ga~~i~~----~~~~~i~~ir~~v~~Pvig~~k~~~~~~~~~I~~----~~~~i~~~~~aGad~I~l 107 (229)
T 3q58_A 39 AAMAQAAASAGAVAVRI----EGIENLRTVRPHLSVPIIGIIKRDLTGSPVRITP----YLQDVDALAQAGADIIAF 107 (229)
T ss_dssp HHHHHHHHHTTCSEEEE----ESHHHHHHHGGGCCSCEEEECBCCCSSCCCCBSC----SHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHHCCCcEEEE----CCHHHHHHHHHhcCCCEEEEEeecCCCCceEeCc----cHHHHHHHHHcCCCEEEE
Confidence 48999999999987543 256776543 222322 232 2222 223467788999997744
No 128
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=72.66 E-value=8.1 Score=34.84 Aligned_cols=35 Identities=17% Similarity=0.207 Sum_probs=29.3
Q ss_pred CCHHHHHHHHHhC--CCCEEE-EccCCHHHHHHHhhCC
Q 025657 215 LNWKDVKWLQTIT--SLPILV-KGVLTAEDGSKLLSKE 249 (249)
Q Consensus 215 ~tW~dl~wlr~~~--~lPivl-KGIl~~eDA~~A~~~~ 249 (249)
.+|+-+..+++.. +.||+. =||.+++|+.+++..|
T Consensus 265 ~~~~~l~~v~~~~~~~ipvia~GGI~~~~D~~k~l~~G 302 (370)
T 1gox_A 265 ATIMALEEVVKAAQGRIPVFLDGGVRRGTDVFKALALG 302 (370)
T ss_dssp CHHHHHHHHHHHTTTSSCEEEESSCCSHHHHHHHHHHT
T ss_pred cHHHHHHHHHHHhCCCCEEEEECCCCCHHHHHHHHHcC
Confidence 3678888998877 689987 5699999999999876
No 129
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=72.62 E-value=10 Score=35.75 Aligned_cols=112 Identities=14% Similarity=0.107 Sum_probs=64.2
Q ss_pred hHHHHHHHHhcCCcEEecCCC-CCC------HHHHHhcCCC-ceeE-EEccccChHHHHHHHHHHHHcCCcEEEEeecCC
Q 025657 93 ECATARAASAAGTIMTLSSWA-TSS------VEEVSSTGPG-IRFF-QLYVTKHRNVDAQLVKRAERAGFKAIALTVDTP 163 (249)
Q Consensus 93 E~~~AraA~~~gi~~~lss~s-s~s------leeia~~~~~-~~wf-QlY~~~d~~~~~~li~rA~~aG~~alvvTvD~p 163 (249)
....+++..++|+-.+.=+.+ ..+ +++|.+..|+ +.+. ++ .+. +..+++.++|+++|+|..- |
T Consensus 232 ~~~~a~~l~~aG~d~I~id~a~g~~~~~~~~i~~ir~~~p~~~Vi~g~v---~t~----e~a~~l~~aGaD~I~Vg~g-~ 303 (496)
T 4fxs_A 232 NEERVKALVEAGVDVLLIDSSHGHSEGVLQRIRETRAAYPHLEIIGGNV---ATA----EGARALIEAGVSAVKVGIG-P 303 (496)
T ss_dssp CHHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHHCTTCCEEEEEE---CSH----HHHHHHHHHTCSEEEECSS-C
T ss_pred hHHHHHHHHhccCceEEeccccccchHHHHHHHHHHHHCCCceEEEccc---CcH----HHHHHHHHhCCCEEEECCC-C
Confidence 457778888888776542222 222 4455555543 3333 12 222 4557778899999987542 2
Q ss_pred CCCCchhhhhccCCCCCccccccccccccCCCCCCCCchhhhHhhhhcCCCCCHHHHHHHHH---hCCCCEEEE-ccCCH
Q 025657 164 RLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQT---ITSLPILVK-GVLTA 239 (249)
Q Consensus 164 ~~g~Re~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tW~dl~wlr~---~~~lPivlK-GIl~~ 239 (249)
...-..+.. .++ ..-+|+-+.++.+ ..+.|||.= ||.++
T Consensus 304 Gs~~~tr~~-~g~------------------------------------g~p~~~~i~~v~~~~~~~~iPVIa~GGI~~~ 346 (496)
T 4fxs_A 304 GSICTTRIV-TGV------------------------------------GVPQITAIADAAGVANEYGIPVIADGGIRFS 346 (496)
T ss_dssp CTTBCHHHH-HCC------------------------------------CCCHHHHHHHHHHHHGGGTCCEEEESCCCSH
T ss_pred CcCcccccc-cCC------------------------------------CccHHHHHHHHHHHhccCCCeEEEeCCCCCH
Confidence 211111110 011 0124555556655 458999987 89999
Q ss_pred HHHHHHhhCC
Q 025657 240 EDGSKLLSKE 249 (249)
Q Consensus 240 eDA~~A~~~~ 249 (249)
+|+.+|+..|
T Consensus 347 ~di~kala~G 356 (496)
T 4fxs_A 347 GDISKAIAAG 356 (496)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHHHHHcC
Confidence 9999999876
No 130
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=72.09 E-value=40 Score=29.49 Aligned_cols=82 Identities=13% Similarity=0.086 Sum_probs=49.2
Q ss_pred ceeeccc-cccccCCChhhHHHHHHHHhcCCcEEe--cC---CCCCCHHHHH-------hc-CC-CceeEEEccccChHH
Q 025657 76 PIMIAPT-AFQKMAHPEGECATARAASAAGTIMTL--SS---WATSSVEEVS-------ST-GP-GIRFFQLYVTKHRNV 140 (249)
Q Consensus 76 Pi~iaP~-g~~~l~h~~gE~~~AraA~~~gi~~~l--ss---~ss~sleeia-------~~-~~-~~~wfQlY~~~d~~~ 140 (249)
|.++.|+ .-.+-++.++=..+++---+.|+--++ || ..+.|.||=. +. .+ -+.+...-- +-..
T Consensus 17 ~a~vTPF~~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg~--st~~ 94 (314)
T 3d0c_A 17 GINIVPFLEGTREIDWKGLDDNVEFLLQNGIEVIVPNGNTGEFYALTIEEAKQVATRVTELVNGRATVVAGIGY--SVDT 94 (314)
T ss_dssp ECCCCCBCTTTCCBCHHHHHHHHHHHHHTTCSEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECS--SHHH
T ss_pred EeeeccccCCCCCCCHHHHHHHHHHHHHcCCCEEEECcccCChhhCCHHHHHHHHHHHHHHhCCCCeEEecCCc--CHHH
Confidence 4455665 333333444444667766777875543 33 2245655432 22 22 345667643 5566
Q ss_pred HHHHHHHHHHcCCcEEEEe
Q 025657 141 DAQLVKRAERAGFKAIALT 159 (249)
Q Consensus 141 ~~~li~rA~~aG~~alvvT 159 (249)
+.++.+.|+++|+.++++.
T Consensus 95 ai~la~~A~~~Gadavlv~ 113 (314)
T 3d0c_A 95 AIELGKSAIDSGADCVMIH 113 (314)
T ss_dssp HHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHHHcCCCEEEEC
Confidence 7799999999999999876
No 131
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=71.05 E-value=15 Score=30.17 Aligned_cols=112 Identities=14% Similarity=0.198 Sum_probs=59.7
Q ss_pred HhcCCcEEecCCCCCCHHHHHhc--CCCceeEEEccccChHHHHHHHHHHHHcCCcEEEEeecCCCCCCchhhhhccCCC
Q 025657 101 SAAGTIMTLSSWATSSVEEVSST--GPGIRFFQLYVTKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVL 178 (249)
Q Consensus 101 ~~~gi~~~lss~ss~sleeia~~--~~~~~wfQlY~~~d~~~~~~li~rA~~aG~~alvvTvD~p~~g~Re~d~r~~~~~ 178 (249)
.+.++.-++-..+.....+++++ ..+..|+|+-.. +.. ..+.++++++ +.+++..++ +.-+ .+.+.-+.
T Consensus 11 ~~~~ii~vi~~~~~~~~~~~~~~l~~gGv~~iel~~k-~~~-~~~~i~~~~~---~~~~~gag~-vl~~--d~~~~A~~- 81 (207)
T 2yw3_A 11 AESRLLPLLTVRGGEDLLGLARVLEEEGVGALEITLR-TEK-GLEALKALRK---SGLLLGAGT-VRSP--KEAEAALE- 81 (207)
T ss_dssp HHHCEEEEECCCSCCCHHHHHHHHHHTTCCEEEEECS-STH-HHHHHHHHTT---SSCEEEEES-CCSH--HHHHHHHH-
T ss_pred HhCCEEEEEeCCCHHHHHHHHHHHHHcCCCEEEEeCC-ChH-HHHHHHHHhC---CCCEEEeCe-EeeH--HHHHHHHH-
Confidence 44556666555555555555543 235778888643 322 2467777776 556666666 3211 11111000
Q ss_pred CCccccccccccccCCCCCCCCchhhhHhhhhcCCCCCHHHHHHHHHhCCCCEEEEccCCHHHHHHHhhCC
Q 025657 179 PPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKGVLTAEDGSKLLSKE 249 (249)
Q Consensus 179 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tW~dl~wlr~~~~lPivlKGIl~~eDA~~A~~~~ 249 (249)
.+.. ....|..+ .++...++..+.|+++ |+.|++++.+|.+.|
T Consensus 82 ---------~GAd-----------------~v~~~~~d-~~v~~~~~~~g~~~i~-G~~t~~e~~~A~~~G 124 (207)
T 2yw3_A 82 ---------AGAA-----------------FLVSPGLL-EEVAALAQARGVPYLP-GVLTPTEVERALALG 124 (207)
T ss_dssp ---------HTCS-----------------EEEESSCC-HHHHHHHHHHTCCEEE-EECSHHHHHHHHHTT
T ss_pred ---------cCCC-----------------EEEcCCCC-HHHHHHHHHhCCCEEe-cCCCHHHHHHHHHCC
Confidence 0000 00112233 2343344457788777 899999999999876
No 132
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=70.66 E-value=11 Score=35.37 Aligned_cols=113 Identities=18% Similarity=0.104 Sum_probs=64.0
Q ss_pred hHHHHHHHHhcCCcEEec-CCCCCC------HHHHHhcCCC-ceeEEEccccChHHHHHHHHHHHHcCCcEEEEeecCCC
Q 025657 93 ECATARAASAAGTIMTLS-SWATSS------VEEVSSTGPG-IRFFQLYVTKHRNVDAQLVKRAERAGFKAIALTVDTPR 164 (249)
Q Consensus 93 E~~~AraA~~~gi~~~ls-s~ss~s------leeia~~~~~-~~wfQlY~~~d~~~~~~li~rA~~aG~~alvvTvD~p~ 164 (249)
....++++.++|+-++.= +....+ ++++.+..|+ +.+.-- .. +.+..+++.++|+.+|+|.. .+.
T Consensus 230 ~~~~a~~l~~aG~d~I~id~a~g~~~~~~~~v~~i~~~~p~~~Vi~g~--v~----t~e~a~~l~~aGaD~I~vg~-g~G 302 (490)
T 4avf_A 230 TGERVAALVAAGVDVVVVDTAHGHSKGVIERVRWVKQTFPDVQVIGGN--IA----TAEAAKALAEAGADAVKVGI-GPG 302 (490)
T ss_dssp HHHHHHHHHHTTCSEEEEECSCCSBHHHHHHHHHHHHHCTTSEEEEEE--EC----SHHHHHHHHHTTCSEEEECS-SCS
T ss_pred hHHHHHHHhhcccceEEecccCCcchhHHHHHHHHHHHCCCceEEEee--eC----cHHHHHHHHHcCCCEEEECC-CCC
Confidence 457778888888877642 211122 3444444543 233310 12 23456788899999998743 111
Q ss_pred CCCchhhhhccCCCCCccccccccccccCCCCCCCCchhhhHhhhhcCCCCCHHHHHHHHH---hCCCCEEEE-ccCCHH
Q 025657 165 LGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQT---ITSLPILVK-GVLTAE 240 (249)
Q Consensus 165 ~g~Re~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tW~dl~wlr~---~~~lPivlK-GIl~~e 240 (249)
.--..+.. .++ ..-+|+-+.++++ ..+.|||.= ||.+++
T Consensus 303 s~~~t~~~-~g~------------------------------------g~p~~~~l~~v~~~~~~~~iPVIa~GGI~~~~ 345 (490)
T 4avf_A 303 SICTTRIV-AGV------------------------------------GVPQISAIANVAAALEGTGVPLIADGGIRFSG 345 (490)
T ss_dssp TTCHHHHH-TCB------------------------------------CCCHHHHHHHHHHHHTTTTCCEEEESCCCSHH
T ss_pred cCCCcccc-CCC------------------------------------CccHHHHHHHHHHHhccCCCcEEEeCCCCCHH
Confidence 10000000 001 0124555666666 457999986 799999
Q ss_pred HHHHHhhCC
Q 025657 241 DGSKLLSKE 249 (249)
Q Consensus 241 DA~~A~~~~ 249 (249)
|+.+|+.+|
T Consensus 346 di~kal~~G 354 (490)
T 4avf_A 346 DLAKAMVAG 354 (490)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHcC
Confidence 999999876
No 133
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=70.63 E-value=20 Score=30.56 Aligned_cols=34 Identities=15% Similarity=0.060 Sum_probs=28.4
Q ss_pred CHHHHHHHHHhCCCCEEEEc-cCCHHHHHHHhhCC
Q 025657 216 NWKDVKWLQTITSLPILVKG-VLTAEDGSKLLSKE 249 (249)
Q Consensus 216 tW~dl~wlr~~~~lPivlKG-Il~~eDA~~A~~~~ 249 (249)
..+.++.+|+.++.||.+=| |.++|++..|+.+|
T Consensus 193 ~~~~i~~lr~~~~~pi~vggGI~t~e~~~~~~~ag 227 (268)
T 1qop_A 193 LHHLIEKLKEYHAAPALQGFGISSPEQVSAAVRAG 227 (268)
T ss_dssp CHHHHHHHHHTTCCCEEEESSCCSHHHHHHHHHTT
T ss_pred HHHHHHHHHhccCCcEEEECCCCCHHHHHHHHHcC
Confidence 46789999999999998864 66699999988765
No 134
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=70.14 E-value=9.7 Score=32.96 Aligned_cols=26 Identities=19% Similarity=0.211 Sum_probs=23.1
Q ss_pred cChHHHHHHHHHHHHcCCcEEEEeecC
Q 025657 136 KHRNVDAQLVKRAERAGFKAIALTVDT 162 (249)
Q Consensus 136 ~d~~~~~~li~rA~~aG~~alvvTvD~ 162 (249)
.|.+...++++++.++|+..|.+. |+
T Consensus 152 ~~~~~~~~~~~~~~~~G~d~i~l~-Dt 177 (295)
T 1ydn_A 152 VTPQAVASVTEQLFSLGCHEVSLG-DT 177 (295)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEE-ET
T ss_pred CCHHHHHHHHHHHHhcCCCEEEec-CC
Confidence 588999999999999999999887 75
No 135
>3tjx_A Dihydroorotate dehydrogenase; PYRD, dhodh, lmdhodh, oxidored mutation H174A; HET: FMN; 1.64A {Leishmania major} PDB: 3gz3_A* 3gye_A* 3tro_A*
Probab=70.06 E-value=7 Score=34.87 Aligned_cols=32 Identities=19% Similarity=0.145 Sum_probs=23.4
Q ss_pred HHHHHHHHhC-CCCEE-EEccCCHHHHHHHhhCC
Q 025657 218 KDVKWLQTIT-SLPIL-VKGVLTAEDGSKLLSKE 249 (249)
Q Consensus 218 ~dl~wlr~~~-~lPiv-lKGIl~~eDA~~A~~~~ 249 (249)
+-+..+++.. +.||| +=||.+++||.+.+.+|
T Consensus 266 ~~v~~~~~~~~~~pIIg~GGI~s~~Da~e~i~aG 299 (354)
T 3tjx_A 266 ANINAFYRRCPGKLIFGCGGVYTGEDAFLHVLAG 299 (354)
T ss_dssp HHHHHHHHHCTTSEEEEESSCCSHHHHHHHHHHT
T ss_pred HHHHHHHHhcCCCcEEEeCCcCCHHHHHHHHHcC
Confidence 3345555555 57875 45899999999999876
No 136
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=69.95 E-value=5.8 Score=32.91 Aligned_cols=37 Identities=14% Similarity=0.286 Sum_probs=32.6
Q ss_pred CCCCHHHHHHHHHhCCCCEEEEc-cCCHHHHHHHhhCC
Q 025657 213 RSLNWKDVKWLQTITSLPILVKG-VLTAEDGSKLLSKE 249 (249)
Q Consensus 213 ~~~tW~dl~wlr~~~~lPivlKG-Il~~eDA~~A~~~~ 249 (249)
|.+--+-|+++++.++.|||.=| |.+.||+..|+++|
T Consensus 135 PGi~p~iI~~i~~~~~~PiIaGGlI~~~edv~~al~aG 172 (192)
T 3kts_A 135 PGIIPEQVQKMTQKLHIPVIAGGLIETSEQVNQVIASG 172 (192)
T ss_dssp CTTCHHHHHHHHHHHCCCEEEESSCCSHHHHHHHHTTT
T ss_pred CchhHHHHHHHHHhcCCCEEEECCcCCHHHHHHHHHcC
Confidence 44556789999999999999987 78999999999998
No 137
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=69.72 E-value=8.1 Score=35.11 Aligned_cols=110 Identities=11% Similarity=0.070 Sum_probs=63.2
Q ss_pred hHHHHHHHHhcCCcEEe--cCCCCC--CHHHH---HhcCCC-ceeE-EEccccChHHHHHHHHHHHHcCCcEEEEeecCC
Q 025657 93 ECATARAASAAGTIMTL--SSWATS--SVEEV---SSTGPG-IRFF-QLYVTKHRNVDAQLVKRAERAGFKAIALTVDTP 163 (249)
Q Consensus 93 E~~~AraA~~~gi~~~l--ss~ss~--sleei---a~~~~~-~~wf-QlY~~~d~~~~~~li~rA~~aG~~alvvTvD~p 163 (249)
....++.+.+.|...+. ++.... .+|.| .+..++ +.+. .+ . +.+.+++++++|+++|+|+...
T Consensus 154 ~~~~a~~~~~~G~d~i~i~~~~g~~~~~~e~i~~ir~~~~~~pviv~~v---~----~~~~a~~a~~~Gad~I~vg~~~- 225 (404)
T 1eep_A 154 TIERVEELVKAHVDILVIDSAHGHSTRIIELIKKIKTKYPNLDLIAGNI---V----TKEAALDLISVGADCLKVGIGP- 225 (404)
T ss_dssp HHHHHHHHHHTTCSEEEECCSCCSSHHHHHHHHHHHHHCTTCEEEEEEE---C----SHHHHHHHHTTTCSEEEECSSC-
T ss_pred HHHHHHHHHHCCCCEEEEeCCCCChHHHHHHHHHHHHHCCCCeEEEcCC---C----cHHHHHHHHhcCCCEEEECCCC-
Confidence 35566777788887764 223322 23333 444433 3343 22 1 2366788899999999985421
Q ss_pred CCCC--chhhhhccCCCCCccccccccccccCCCCCCCCchhhhHhhhhcCCCCCHHHHHHHHH---hCCCCEEE-EccC
Q 025657 164 RLGR--READIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQT---ITSLPILV-KGVL 237 (249)
Q Consensus 164 ~~g~--Re~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tW~dl~wlr~---~~~lPivl-KGIl 237 (249)
|. +.+.. .+. ..-+|+-+.++++ ..+.||+. =||.
T Consensus 226 --G~~~~~~~~-~~~------------------------------------g~p~~~~l~~v~~~~~~~~ipVia~GGI~ 266 (404)
T 1eep_A 226 --GSICTTRIV-AGV------------------------------------GVPQITAICDVYEACNNTNICIIADGGIR 266 (404)
T ss_dssp --STTSHHHHH-HCC------------------------------------CCCHHHHHHHHHHHHTTSSCEEEEESCCC
T ss_pred --CcCcCcccc-CCC------------------------------------CcchHHHHHHHHHHHhhcCceEEEECCCC
Confidence 21 00000 000 0113555666665 56899887 4799
Q ss_pred CHHHHHHHhhCC
Q 025657 238 TAEDGSKLLSKE 249 (249)
Q Consensus 238 ~~eDA~~A~~~~ 249 (249)
+++|+.+|+..|
T Consensus 267 ~~~d~~~ala~G 278 (404)
T 1eep_A 267 FSGDVVKAIAAG 278 (404)
T ss_dssp SHHHHHHHHHHT
T ss_pred CHHHHHHHHHcC
Confidence 999999999876
No 138
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=69.46 E-value=6.2 Score=32.91 Aligned_cols=30 Identities=13% Similarity=0.110 Sum_probs=24.4
Q ss_pred HHHHHHHhCCCCEEEEccCCHHHHHHHhhCC
Q 025657 219 DVKWLQTITSLPILVKGVLTAEDGSKLLSKE 249 (249)
Q Consensus 219 dl~wlr~~~~lPivlKGIl~~eDA~~A~~~~ 249 (249)
++...++..+.|+++ |+.|++++.+|.+.|
T Consensus 100 ~v~~~~~~~g~~~i~-G~~t~~e~~~A~~~G 129 (214)
T 1wbh_A 100 PLLKAATEGTIPLIP-GISTVSELMLGMDYG 129 (214)
T ss_dssp HHHHHHHHSSSCEEE-EESSHHHHHHHHHTT
T ss_pred HHHHHHHHhCCCEEE-ecCCHHHHHHHHHCC
Confidence 455566667878877 999999999999876
No 139
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=69.43 E-value=67 Score=29.20 Aligned_cols=80 Identities=21% Similarity=0.253 Sum_probs=46.3
Q ss_pred ccceeecCccc---ccceeeccccccccCCChhhHHHHHHHHhcCCcEEec-CCCCCCHHHHHhcCCCceeEEEccccCh
Q 025657 63 DMTTTVLGFNI---SMPIMIAPTAFQKMAHPEGECATARAASAAGTIMTLS-SWATSSVEEVSSTGPGIRFFQLYVTKHR 138 (249)
Q Consensus 63 d~st~llG~~~---~~Pi~iaP~g~~~l~h~~gE~~~AraA~~~gi~~~ls-s~ss~sleeia~~~~~~~wfQlY~~~d~ 138 (249)
|+..++-|..+ ..+++++|++.. ..+.=..+|++++++|..++.. ++-..+ .+. .|-.+ ..
T Consensus 128 ~t~i~i~~~~iG~~~~~~Iigpcsve---s~e~a~~~a~~~k~aGa~~vk~q~fkprt-------s~~-~f~gl----~~ 192 (385)
T 3nvt_A 128 DTIVTVKGLPIGNGEPVFVFGPCSVE---SYEQVAAVAESIKAKGLKLIRGGAFKPRT-------SPY-DFQGL----GL 192 (385)
T ss_dssp CCCEEETTEEETSSSCEEEEECSBCC---CHHHHHHHHHHHHHTTCCEEECBSSCCCS-------STT-SCCCC----TH
T ss_pred CcEEEECCEEECCCCeEEEEEeCCcC---CHHHHHHHHHHHHHcCCCeEEcccccCCC-------ChH-hhcCC----CH
Confidence 44445443333 257889998876 2333458999999999988753 332111 121 12112 23
Q ss_pred HHHHHHHHHHHHcCCcEEE
Q 025657 139 NVDAQLVKRAERAGFKAIA 157 (249)
Q Consensus 139 ~~~~~li~rA~~aG~~alv 157 (249)
+-.+.|.+.+++.|...+.
T Consensus 193 egl~~L~~~~~~~Gl~~~t 211 (385)
T 3nvt_A 193 EGLKILKRVSDEYGLGVIS 211 (385)
T ss_dssp HHHHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHHHHcCCEEEE
Confidence 5556676777788986653
No 140
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=69.39 E-value=37 Score=28.90 Aligned_cols=91 Identities=9% Similarity=0.099 Sum_probs=45.8
Q ss_pred ceeecCcccccceeeccccccccCCChhhHHHHHHHHhcCCcEE-ecC-CC---CCCHHHHHhcCCC---ceeEEEcccc
Q 025657 65 TTTVLGFNISMPIMIAPTAFQKMAHPEGECATARAASAAGTIMT-LSS-WA---TSSVEEVSSTGPG---IRFFQLYVTK 136 (249)
Q Consensus 65 st~llG~~~~~Pi~iaP~g~~~l~h~~gE~~~AraA~~~gi~~~-lss-~s---s~sleeia~~~~~---~~wfQlY~~~ 136 (249)
.++|.|+++..|++++.-|. |+.|.- .++..+.|.-++ |+- .+ ..+++++.+.-+. +.........
T Consensus 3 ~~~i~~~~~~~~~~~~t~g~-----p~~~~~-~~~l~~~Gad~ielg~pr~~~~g~~~~~~~~~l~~~~~~~~pn~~~~~ 76 (264)
T 1xm3_A 3 MLTIGGKSFQSRLLLGTGKY-----PSFDIQ-KEAVAVSESDILTFAVRRMNIFEASQPNFLEQLDLSKYTLLPNTAGAS 76 (264)
T ss_dssp CEEETTEEESCCEEEECSCS-----SCHHHH-HHHHHHHTCSEEEEETTSSTTC-------CTTCCGGGSEEEEECTTCS
T ss_pred CeEECCEEecCCCEEEecCC-----CCHHHH-HHHHHHcCCeEEEEcccccccCCCCHHHHHHHHHhcCCeEcCCccccC
Confidence 46799999999999988554 555442 244445554333 331 11 3445666543321 1122333234
Q ss_pred ChHHHHHHHHHHHHcCCcEEEEeecC
Q 025657 137 HRNVDAQLVKRAERAGFKAIALTVDT 162 (249)
Q Consensus 137 d~~~~~~li~rA~~aG~~alvvTvD~ 162 (249)
+.+.....++.|+++|...+ +++|.
T Consensus 77 ~~~~~~~f~~~a~~agg~~~-i~l~i 101 (264)
T 1xm3_A 77 TAEEAVRIARLAKASGLCDM-IKVEV 101 (264)
T ss_dssp SHHHHHHHHHHHHHTTCCSS-EEECC
T ss_pred CHHHHHHHHHHHHHcCCCCe-EEEee
Confidence 55554567788888754333 44553
No 141
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=69.16 E-value=29 Score=30.75 Aligned_cols=83 Identities=22% Similarity=0.078 Sum_probs=48.6
Q ss_pred ceeeccccccccCCChhhHHHHHHHHhcCCcE--EecCCC---CCCHHHHH-------hcCC--CceeEEEccccChHHH
Q 025657 76 PIMIAPTAFQKMAHPEGECATARAASAAGTIM--TLSSWA---TSSVEEVS-------STGP--GIRFFQLYVTKHRNVD 141 (249)
Q Consensus 76 Pi~iaP~g~~~l~h~~gE~~~AraA~~~gi~~--~lss~s---s~sleeia-------~~~~--~~~wfQlY~~~d~~~~ 141 (249)
|.++.|+.-.+-++.++=..+++---+.|+-- ++||.+ +.|.||-. +... -+.+...-- .+-..+
T Consensus 40 ~a~vTPF~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~-~st~ea 118 (332)
T 2r8w_A 40 AFPITPADEAGRVDIEAFSALIARLDAAEVDSVGILGSTGIYMYLTREERRRAIEAAATILRGRRTLMAGIGA-LRTDEA 118 (332)
T ss_dssp ECCCCCBCTTCCBCHHHHHHHHHHHHHHTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECC-SSHHHH
T ss_pred EEeeCCcCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCC-CCHHHH
Confidence 44556654333334444446666666677743 455544 34555432 2222 345666632 344667
Q ss_pred HHHHHHHHHcCCcEEEEe
Q 025657 142 AQLVKRAERAGFKAIALT 159 (249)
Q Consensus 142 ~~li~rA~~aG~~alvvT 159 (249)
.++.+.|+++|+.++++.
T Consensus 119 i~la~~A~~~Gadavlv~ 136 (332)
T 2r8w_A 119 VALAKDAEAAGADALLLA 136 (332)
T ss_dssp HHHHHHHHHHTCSEEEEC
T ss_pred HHHHHHHHhcCCCEEEEC
Confidence 799999999999999886
No 142
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=68.88 E-value=4.8 Score=36.14 Aligned_cols=37 Identities=19% Similarity=0.197 Sum_probs=31.7
Q ss_pred CCCCHHHHHHHHHhCCCCEEEEc-cCCHHHHHHHhhCC
Q 025657 213 RSLNWKDVKWLQTITSLPILVKG-VLTAEDGSKLLSKE 249 (249)
Q Consensus 213 ~~~tW~dl~wlr~~~~lPivlKG-Il~~eDA~~A~~~~ 249 (249)
+...|+-++++|+.++.||+.=| |.+++||+.+++.|
T Consensus 262 ~~~~~~~~~~ir~~~~iPVi~~Ggi~t~e~Ae~~l~~G 299 (343)
T 3kru_A 262 PGYQVKYAETIKKRCNIKTSAVGLITTQELAEEILSNE 299 (343)
T ss_dssp TTTTHHHHHHHHHHHTCEEEEESSCCCHHHHHHHHHTT
T ss_pred CceeehHHHHHHHhcCcccceeeeeeHHHHHHHHHhch
Confidence 34678889999999999999876 56899999999875
No 143
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=68.68 E-value=23 Score=31.18 Aligned_cols=85 Identities=15% Similarity=0.014 Sum_probs=51.9
Q ss_pred cceeeccccccccCCChhhHHHHHHHHhcCCcE--EecCCC---CCCHHHHH-------hc-CC-CceeEEEccccChHH
Q 025657 75 MPIMIAPTAFQKMAHPEGECATARAASAAGTIM--TLSSWA---TSSVEEVS-------ST-GP-GIRFFQLYVTKHRNV 140 (249)
Q Consensus 75 ~Pi~iaP~g~~~l~h~~gE~~~AraA~~~gi~~--~lss~s---s~sleeia-------~~-~~-~~~wfQlY~~~d~~~ 140 (249)
.|.++.|+.-.+-++.++=..+.+---+.|+-- +.||.+ +.|.||-. +. .+ -+.+.+.- ..+-+.
T Consensus 29 ~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~Gi~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg-~~~t~~ 107 (315)
T 3na8_A 29 IGYTITPFAADGGLDLPALGRSIERLIDGGVHAIAPLGSTGEGAYLSDPEWDEVVDFTLKTVAHRVPTIVSVS-DLTTAK 107 (315)
T ss_dssp EEECCCCBCTTSSBCHHHHHHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECC-CSSHHH
T ss_pred EEEeeCcCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecC-CCCHHH
Confidence 456667765444345555457777777788854 344433 34555432 22 22 34566653 235567
Q ss_pred HHHHHHHHHHcCCcEEEEee
Q 025657 141 DAQLVKRAERAGFKAIALTV 160 (249)
Q Consensus 141 ~~~li~rA~~aG~~alvvTv 160 (249)
+.++.+.|+++|+.++++..
T Consensus 108 ai~la~~A~~~Gadavlv~~ 127 (315)
T 3na8_A 108 TVRRAQFAESLGAEAVMVLP 127 (315)
T ss_dssp HHHHHHHHHHTTCSEEEECC
T ss_pred HHHHHHHHHhcCCCEEEECC
Confidence 78999999999999998853
No 144
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=66.95 E-value=13 Score=34.59 Aligned_cols=30 Identities=13% Similarity=0.154 Sum_probs=27.1
Q ss_pred HHHHHHHHHhCCCCEEEEccCCHHHHHHHh
Q 025657 217 WKDVKWLQTITSLPILVKGVLTAEDGSKLL 246 (249)
Q Consensus 217 W~dl~wlr~~~~lPivlKGIl~~eDA~~A~ 246 (249)
+++++||++.++.|+++|+|.++++|+.++
T Consensus 257 L~~I~~l~~~~~vpvi~k~v~~~~~a~~l~ 286 (486)
T 2cu0_A 257 IKSMKEMRQKVDADFIVGNIANPKAVDDLT 286 (486)
T ss_dssp HHHHHHHHHTCCSEEEEEEECCHHHHTTCT
T ss_pred hhHHHHHHHHhCCccccCCcCCHHHHHHhh
Confidence 478999999999999999999999997665
No 145
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=66.82 E-value=39 Score=29.61 Aligned_cols=65 Identities=11% Similarity=0.082 Sum_probs=41.7
Q ss_pred HHHHHHHhcCCcEEecCCCCCCHHHHHhcCCCceeEEEccccChHHHHHHHHHHHHcCCcEEEEe
Q 025657 95 ATARAASAAGTIMTLSSWATSSVEEVSSTGPGIRFFQLYVTKHRNVDAQLVKRAERAGFKAIALT 159 (249)
Q Consensus 95 ~~AraA~~~gi~~~lss~ss~sleeia~~~~~~~wfQlY~~~d~~~~~~li~rA~~aG~~alvvT 159 (249)
..++.|.++|.-++--++...++++|.+..+-+...+==...+.+...++++.|-++|+..+++.
T Consensus 193 ~aariA~elGAD~VKt~~t~e~~~~vv~~~~vPVv~~GG~~~~~~~~l~~v~~ai~aGA~Gv~vG 257 (295)
T 3glc_A 193 LATRIAAEMGAQIIKTYYVEKGFERIVAGCPVPIVIAGGKKLPEREALEMCWQAIDQGASGVDMG 257 (295)
T ss_dssp HHHHHHHHTTCSEEEEECCTTTHHHHHHTCSSCEEEECCSCCCHHHHHHHHHHHHHTTCSEEEES
T ss_pred HHHHHHHHhCCCEEEeCCCHHHHHHHHHhCCCcEEEEECCCCCHHHHHHHHHHHHHhCCeEEEeH
Confidence 47788888888776544544578888765543332222112255666778888888898877654
No 146
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=65.85 E-value=27 Score=28.17 Aligned_cols=32 Identities=16% Similarity=0.225 Sum_probs=23.6
Q ss_pred eEEEccccChHHHHHHHHHHHHcCCcEEEEee
Q 025657 129 FFQLYVTKHRNVDAQLVKRAERAGFKAIALTV 160 (249)
Q Consensus 129 wfQlY~~~d~~~~~~li~rA~~aG~~alvvTv 160 (249)
.+-.-...|.+...++++++.++|++.|-++.
T Consensus 9 i~~~i~~~d~~~~~~~~~~~~~~G~~~i~l~~ 40 (212)
T 2v82_A 9 LIAILRGITPDEALAHVGAVIDAGFDAVEIPL 40 (212)
T ss_dssp EEEECTTCCHHHHHHHHHHHHHHTCCEEEEET
T ss_pred EEEEEeCCCHHHHHHHHHHHHHCCCCEEEEeC
Confidence 34444456777788889999999999887753
No 147
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=65.51 E-value=6.4 Score=36.11 Aligned_cols=34 Identities=15% Similarity=0.131 Sum_probs=29.8
Q ss_pred CHHHHHHHHHhCCCCEEEEccCCHHHHHHHhhCC
Q 025657 216 NWKDVKWLQTITSLPILVKGVLTAEDGSKLLSKE 249 (249)
Q Consensus 216 tW~dl~wlr~~~~lPivlKGIl~~eDA~~A~~~~ 249 (249)
.|+-++++|+.+++||+.=|=.+++||+.+++.|
T Consensus 307 ~~~~~~~vk~~~~iPvi~~G~i~~~~a~~~l~~g 340 (402)
T 2hsa_B 307 EARLMRTLRNAYQGTFICSGGYTRELGIEAVAQG 340 (402)
T ss_dssp HHHHHHHHHHHCSSCEEEESSCCHHHHHHHHHTT
T ss_pred hHHHHHHHHHHCCCCEEEeCCCCHHHHHHHHHCC
Confidence 4677889999999999988866999999999865
No 148
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=65.12 E-value=36 Score=29.45 Aligned_cols=36 Identities=19% Similarity=0.252 Sum_probs=26.9
Q ss_pred CCCHHHHHHHHHhCC--CCEE-EEccCCHHHHHHHhhCC
Q 025657 214 SLNWKDVKWLQTITS--LPIL-VKGVLTAEDGSKLLSKE 249 (249)
Q Consensus 214 ~~tW~dl~wlr~~~~--lPiv-lKGIl~~eDA~~A~~~~ 249 (249)
..+.+....|.+..+ .|+| -=||.++||++++.++|
T Consensus 204 ~~dl~~~~~L~~~ip~~~~vIaesGI~t~edv~~l~~~G 242 (272)
T 3tsm_A 204 EVNLAVSERLAKMAPSDRLLVGESGIFTHEDCLRLEKSG 242 (272)
T ss_dssp CBCTHHHHHHHHHSCTTSEEEEESSCCSHHHHHHHHTTT
T ss_pred CCChHHHHHHHHhCCCCCcEEEECCCCCHHHHHHHHHcC
Confidence 345677778887763 4544 45899999999999887
No 149
>3eez_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, unknown function, PSI-2, protein structure initiative; 2.80A {Silicibacter pomeroyi}
Probab=64.60 E-value=12 Score=33.64 Aligned_cols=34 Identities=18% Similarity=0.388 Sum_probs=29.5
Q ss_pred CHHHHHHHHHhCCCCEEEEc-cCCHHHHHHHhhCC
Q 025657 216 NWKDVKWLQTITSLPILVKG-VLTAEDGSKLLSKE 249 (249)
Q Consensus 216 tW~dl~wlr~~~~lPivlKG-Il~~eDA~~A~~~~ 249 (249)
+|+.+++||+.++.||..=+ |.+++|++.+++.|
T Consensus 225 ~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~ 259 (378)
T 3eez_A 225 TLDDIAAIRPLHSAPVSVDECLVTLQDAARVARDG 259 (378)
T ss_dssp SHHHHHHTGGGCCCCEEECTTCCSHHHHHHHHHTT
T ss_pred CHHHHHHHHhhCCCCEEECCCCCCHHHHHHHHHcC
Confidence 89999999999999998854 67899999988754
No 150
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=63.94 E-value=17 Score=33.60 Aligned_cols=108 Identities=14% Similarity=0.214 Sum_probs=61.9
Q ss_pred hhcccceeccccC-CCCCCccceeecC-cccccceeeccccccccCCChhhHHHHHHHHhcCCcEEecCCCCCCHHHHHh
Q 025657 45 AFSRILFRPRILR-DVSKIDMTTTVLG-FNISMPIMIAPTAFQKMAHPEGECATARAASAAGTIMTLSSWATSSVEEVSS 122 (249)
Q Consensus 45 af~~~~l~pr~l~-~v~~~d~st~llG-~~~~~Pi~iaP~g~~~l~h~~gE~~~AraA~~~gi~~~lss~ss~sleeia~ 122 (249)
-|+++.|+|.... +.+++|++|.|-. ..+..||+.+||... .+.|+ +.+..+.|-.-.+.. ..+.|++.+
T Consensus 13 ~~~d~~~~p~~~~~~p~~v~~~t~lt~~l~~~~Piv~a~M~~v----t~~eL--a~av~~~Gg~G~i~~--~~~~e~~~~ 84 (491)
T 1zfj_A 13 TFDDVLLIPAESHVLPNEVDLKTKLADNLTLNIPIITAAMDTV----TGSKM--AIAIARAGGLGVIHK--NMSITEQAE 84 (491)
T ss_dssp CGGGEEECCCCCCSCGGGCCCCEEEETTEEESSSEEECCCTTT----CSHHH--HHHHHHTTCEEEECC--SSCHHHHHH
T ss_pred ChhhEEeccCcCCcCccccccchhhhhcceecCceEecCchhc----cHHHH--HHHHHHcCCceEEeC--CCCHHHHHH
Confidence 4899999998655 3367888888754 468899999997732 33344 345555554434432 356665432
Q ss_pred c------CCCceeEEEccccChHHHHHHHHHHHHcCCcEEEEee
Q 025657 123 T------GPGIRFFQLYVTKHRNVDAQLVKRAERAGFKAIALTV 160 (249)
Q Consensus 123 ~------~~~~~wfQlY~~~d~~~~~~li~rA~~aG~~alvvTv 160 (249)
. .....--++.......-..+.++...+.++..+.|.=
T Consensus 85 ~i~~v~~~~~im~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd 128 (491)
T 1zfj_A 85 EVRKVKRSENGVIIDPFFLTPEHKVSEAEELMQRYRISGVPIVE 128 (491)
T ss_dssp HHHHHHHHTTTTSSSCCCBCSSSBHHHHHHHHHHTTCSEEEEES
T ss_pred HHHHHhhHHhcCcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEE
Confidence 1 0110000111112223345666677778888887753
No 151
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=63.82 E-value=19 Score=32.56 Aligned_cols=32 Identities=9% Similarity=0.096 Sum_probs=26.7
Q ss_pred HHHHHHHHhCC-CCEEEE-ccCCHHHHHHHhhCC
Q 025657 218 KDVKWLQTITS-LPILVK-GVLTAEDGSKLLSKE 249 (249)
Q Consensus 218 ~dl~wlr~~~~-lPivlK-GIl~~eDA~~A~~~~ 249 (249)
.-|.++++..+ .||+.= ||.+++|+.+|+..|
T Consensus 256 ~~l~~v~~~~~~ipvia~GGI~~~~d~~kal~lG 289 (368)
T 3vkj_A 256 ASIMEVRYSVPDSFLVGSGGIRSGLDAAKAIALG 289 (368)
T ss_dssp HHHHHHHHHSTTCEEEEESSCCSHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCCcEEEECCCCCHHHHHHHHHcC
Confidence 56778888774 899986 799999999998766
No 152
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=62.19 E-value=62 Score=27.83 Aligned_cols=83 Identities=12% Similarity=0.041 Sum_probs=50.1
Q ss_pred ceeeccccccccCCChhhHHHHHHHHhcCCcEEe--cCC---CCCCHHHHH-------hc-CC-CceeEEEccccChHHH
Q 025657 76 PIMIAPTAFQKMAHPEGECATARAASAAGTIMTL--SSW---ATSSVEEVS-------ST-GP-GIRFFQLYVTKHRNVD 141 (249)
Q Consensus 76 Pi~iaP~g~~~l~h~~gE~~~AraA~~~gi~~~l--ss~---ss~sleeia-------~~-~~-~~~wfQlY~~~d~~~~ 141 (249)
|.++.|+ -.+-++.++=..+++---+.|+--++ ||. .+.|.||=. +. .+ -+.+...-- .+-..+
T Consensus 7 ~a~vTPf-~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~-~~t~~a 84 (292)
T 2vc6_A 7 TALVTPF-ADDRIDEVALHDLVEWQIEEGSFGLVPCGTTGESPTLSKSEHEQVVEITIKTANGRVPVIAGAGS-NSTAEA 84 (292)
T ss_dssp EECCCCE-ETTEECHHHHHHHHHHHHHTTCSEEETTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCC-SSHHHH
T ss_pred EeeecCc-CCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCC-ccHHHH
Confidence 4556666 44444555555777777777875543 442 244555432 22 22 345566532 244667
Q ss_pred HHHHHHHHHcCCcEEEEee
Q 025657 142 AQLVKRAERAGFKAIALTV 160 (249)
Q Consensus 142 ~~li~rA~~aG~~alvvTv 160 (249)
.++.+.|+++|+.++++..
T Consensus 85 i~la~~A~~~Gadavlv~~ 103 (292)
T 2vc6_A 85 IAFVRHAQNAGADGVLIVS 103 (292)
T ss_dssp HHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHHcCCCEEEEcC
Confidence 7999999999999998864
No 153
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=62.01 E-value=7.9 Score=32.59 Aligned_cols=30 Identities=17% Similarity=0.139 Sum_probs=24.5
Q ss_pred HHHHHHHhCCCCEEEEccCCHHHHHHHhhCC
Q 025657 219 DVKWLQTITSLPILVKGVLTAEDGSKLLSKE 249 (249)
Q Consensus 219 dl~wlr~~~~lPivlKGIl~~eDA~~A~~~~ 249 (249)
++...++..+.|+++ |+.|++++.+|.+.|
T Consensus 110 ~v~~~~~~~g~~~i~-G~~t~~e~~~A~~~G 139 (225)
T 1mxs_A 110 DILEAGVDSEIPLLP-GISTPSEIMMGYALG 139 (225)
T ss_dssp HHHHHHHHCSSCEEC-EECSHHHHHHHHTTT
T ss_pred HHHHHHHHhCCCEEE-eeCCHHHHHHHHHCC
Confidence 455566667878877 999999999999876
No 154
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=61.49 E-value=6.3 Score=34.80 Aligned_cols=36 Identities=14% Similarity=0.242 Sum_probs=32.0
Q ss_pred CCCHHHHHHHHHhCCCCEE---EEccCCHHHHHHHhhCC
Q 025657 214 SLNWKDVKWLQTITSLPIL---VKGVLTAEDGSKLLSKE 249 (249)
Q Consensus 214 ~~tW~dl~wlr~~~~lPiv---lKGIl~~eDA~~A~~~~ 249 (249)
..+|+-++++++..+.|++ .=||.+++|+.++.++|
T Consensus 193 ~~~~~ll~~i~~~~~iPVivvA~GGI~t~~dv~~~~~~G 231 (297)
T 4adt_A 193 RAPIDLILLTRKLKRLPVVNFAAGGIATPADAAMCMQLG 231 (297)
T ss_dssp TCCHHHHHHHHHHTSCSSEEEEESCCCSHHHHHHHHHTT
T ss_pred CCCHHHHHHHHHhcCCCeEEEecCCCCCHHHHHHHHHcC
Confidence 4579999999999999997 68999999999999876
No 155
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=60.94 E-value=7.1 Score=35.45 Aligned_cols=34 Identities=9% Similarity=-0.086 Sum_probs=30.6
Q ss_pred CHHHHHHHHHhCCCCEEEEccCCHHHHHHHhhCC
Q 025657 216 NWKDVKWLQTITSLPILVKGVLTAEDGSKLLSKE 249 (249)
Q Consensus 216 tW~dl~wlr~~~~lPivlKGIl~~eDA~~A~~~~ 249 (249)
.|+-++++|+.++.||+.=|=.+++||+.+++.|
T Consensus 287 ~~~~~~~ik~~~~iPvi~~Ggi~~~~a~~~l~~g 320 (377)
T 2r14_A 287 PEGFREQMRQRFKGGLIYCGNYDAGRAQARLDDN 320 (377)
T ss_dssp CTTHHHHHHHHCCSEEEEESSCCHHHHHHHHHTT
T ss_pred hHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHCC
Confidence 5788999999999999998877999999999875
No 156
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=60.40 E-value=24 Score=33.92 Aligned_cols=34 Identities=18% Similarity=0.189 Sum_probs=29.1
Q ss_pred CHHHHHHHHHhCCCCEEEEc-cCCHHHHHHHhhCC
Q 025657 216 NWKDVKWLQTITSLPILVKG-VLTAEDGSKLLSKE 249 (249)
Q Consensus 216 tW~dl~wlr~~~~lPivlKG-Il~~eDA~~A~~~~ 249 (249)
.++.++.+|+.++.||+.=| |.++++|+.+++.|
T Consensus 268 ~~~~~~~i~~~~~iPvi~~Ggi~~~~~a~~~l~~g 302 (671)
T 1ps9_A 268 FSWVTRKLKGHVSLPLVTTNRINDPQVADDILSRG 302 (671)
T ss_dssp THHHHHHHTTSCSSCEEECSSCCSHHHHHHHHHTT
T ss_pred HHHHHHHHHHhcCceEEEeCCCCCHHHHHHHHHcC
Confidence 45778999999999999775 56999999999875
No 157
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=60.33 E-value=44 Score=28.94 Aligned_cols=82 Identities=13% Similarity=0.036 Sum_probs=48.6
Q ss_pred ceeeccccccccCCChhhHHHHHHHHhcCCcEE--ecCC---CCCCHHHHH-------hcCC--CceeEEEccccChHHH
Q 025657 76 PIMIAPTAFQKMAHPEGECATARAASAAGTIMT--LSSW---ATSSVEEVS-------STGP--GIRFFQLYVTKHRNVD 141 (249)
Q Consensus 76 Pi~iaP~g~~~l~h~~gE~~~AraA~~~gi~~~--lss~---ss~sleeia-------~~~~--~~~wfQlY~~~d~~~~ 141 (249)
|.++.|+ -.+-++.++=..+++---+.|+--+ .||. .+.|.||-. +... -+.+...-- .+-+.+
T Consensus 7 ~a~vTPf-~dg~iD~~~l~~lv~~li~~Gv~gi~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~-~~t~~a 84 (297)
T 2rfg_A 7 IAMITPF-INGQVDEKALAGLVDWQIKHGAHGLVPVGTTGESPTLTEEEHKRVVALVAEQAQGRVPVIAGAGS-NNPVEA 84 (297)
T ss_dssp EECCCCE-ETTEECHHHHHHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCC-SSHHHH
T ss_pred EeeecCc-CCCCcCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEccCC-CCHHHH
Confidence 4556666 4443455554566666667777443 3442 244555432 2212 345555532 244667
Q ss_pred HHHHHHHHHcCCcEEEEe
Q 025657 142 AQLVKRAERAGFKAIALT 159 (249)
Q Consensus 142 ~~li~rA~~aG~~alvvT 159 (249)
.++.+.|+++|+.++++.
T Consensus 85 i~la~~A~~~Gadavlv~ 102 (297)
T 2rfg_A 85 VRYAQHAQQAGADAVLCV 102 (297)
T ss_dssp HHHHHHHHHHTCSEEEEC
T ss_pred HHHHHHHHhcCCCEEEEc
Confidence 789999999999999887
No 158
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=59.28 E-value=23 Score=32.59 Aligned_cols=33 Identities=12% Similarity=0.222 Sum_probs=27.4
Q ss_pred CCHHHHHHHHHhC--CCCEEEE-ccCCHHHHHHHhh
Q 025657 215 LNWKDVKWLQTIT--SLPILVK-GVLTAEDGSKLLS 247 (249)
Q Consensus 215 ~tW~dl~wlr~~~--~lPivlK-GIl~~eDA~~A~~ 247 (249)
..|+.++++|+.+ +.||++= ||.++|+|+.+++
T Consensus 303 ~~~~~a~~Ik~~v~~~iPVI~~GgI~t~e~Ae~~L~ 338 (419)
T 3l5a_A 303 FGRPVNQIVYEHLAGRIPLIASGGINSPESALDALQ 338 (419)
T ss_dssp TTSBHHHHHHHHHTTSSCEEECSSCCSHHHHHHHGG
T ss_pred ccHHHHHHHHHHcCCCCeEEEECCCCCHHHHHHHHH
Confidence 4567789999998 5799876 5789999999986
No 159
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=59.23 E-value=66 Score=25.62 Aligned_cols=34 Identities=12% Similarity=0.083 Sum_probs=27.3
Q ss_pred CHHHHHHHHHhC-CCCEEEEccCCHHHHHHHhhCC
Q 025657 216 NWKDVKWLQTIT-SLPILVKGVLTAEDGSKLLSKE 249 (249)
Q Consensus 216 tW~dl~wlr~~~-~lPivlKGIl~~eDA~~A~~~~ 249 (249)
+++.++++|+.. +.||++=|=.+++++..++++|
T Consensus 146 ~~~~i~~l~~~~~~~~i~~~gGI~~~~~~~~~~~G 180 (211)
T 3f4w_A 146 PIDDLITMLKVRRKARIAVAGGISSQTVKDYALLG 180 (211)
T ss_dssp SHHHHHHHHHHCSSCEEEEESSCCTTTHHHHHTTC
T ss_pred CHHHHHHHHHHcCCCcEEEECCCCHHHHHHHHHcC
Confidence 578899999985 8999776433699999998876
No 160
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Probab=58.60 E-value=12 Score=32.98 Aligned_cols=37 Identities=11% Similarity=0.101 Sum_probs=32.8
Q ss_pred CCCCHHHHHHHHHhC--CCCEEEE-ccCCHHHHHHHhhCC
Q 025657 213 RSLNWKDVKWLQTIT--SLPILVK-GVLTAEDGSKLLSKE 249 (249)
Q Consensus 213 ~~~tW~dl~wlr~~~--~lPivlK-GIl~~eDA~~A~~~~ 249 (249)
...+.+-++.+++.+ +.||++= ||-++|||+.++++|
T Consensus 210 ~~v~~e~V~~I~~~~~~~iPV~vGGGIrs~Eda~~ll~aG 249 (286)
T 3vk5_A 210 EHVPPEVVRHFRKGLGPDQVLFVSGNVRSGRQVTEYLDSG 249 (286)
T ss_dssp SCCCHHHHHHHHHHSCTTCEEEEESSCCSHHHHHHHHHTT
T ss_pred CcCCHHHHHHHHHhcCCCCCEEEEeCCCCHHHHHHHHHcC
Confidence 356778999999999 8999998 899999999999876
No 161
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=57.49 E-value=29 Score=32.18 Aligned_cols=25 Identities=24% Similarity=0.302 Sum_probs=21.0
Q ss_pred HhCCCCEEE-EccCCHHHHHHHhhCC
Q 025657 225 TITSLPILV-KGVLTAEDGSKLLSKE 249 (249)
Q Consensus 225 ~~~~lPivl-KGIl~~eDA~~A~~~~ 249 (249)
+..+.||+. =||.+++|+.+|+..|
T Consensus 337 ~~~~ipvia~GGI~~~~di~kala~G 362 (494)
T 1vrd_A 337 RKYDVPIIADGGIRYSGDIVKALAAG 362 (494)
T ss_dssp HTTTCCEEEESCCCSHHHHHHHHHTT
T ss_pred hhcCCCEEEECCcCCHHHHHHHHHcC
Confidence 336899987 5899999999999876
No 162
>4a3u_A NCR, NADH\:flavin oxidoreductase/NADH oxidase; HET: FMN; 1.70A {Zymomonas mobilis}
Probab=57.26 E-value=7.9 Score=34.80 Aligned_cols=32 Identities=16% Similarity=0.148 Sum_probs=28.5
Q ss_pred HHHHHHHHhCCCCEEEEccCCHHHHHHHhhCC
Q 025657 218 KDVKWLQTITSLPILVKGVLTAEDGSKLLSKE 249 (249)
Q Consensus 218 ~dl~wlr~~~~lPivlKGIl~~eDA~~A~~~~ 249 (249)
+-.+++|+.++.|+++-|+.++|+|+.+++.|
T Consensus 276 ~~a~~ik~~~~~~v~~~g~~~~~~ae~~l~~G 307 (358)
T 4a3u_A 276 KLSPEIRKVFKPPLVLNQDYTFETAQAALDSG 307 (358)
T ss_dssp CCHHHHHHHCCSCEEEESSCCHHHHHHHHHHT
T ss_pred HHHHHHHHhcCCcEEEeCCCCHHHHHHHHHcC
Confidence 34678999999999999999999999999865
No 163
>3ozy_A Putative mandelate racemase; beta-alpha barrel, enolase superfamily member, M-xylarate, U function; HET: DXL; 1.30A {Bordetella bronchiseptica} PDB: 3ozm_A* 3h12_A 3op2_A*
Probab=56.88 E-value=9.3 Score=34.57 Aligned_cols=36 Identities=11% Similarity=0.068 Sum_probs=30.0
Q ss_pred CCCHHHHHHHH-HhCCCCEEEEc-cCCHHHHHHHhhCC
Q 025657 214 SLNWKDVKWLQ-TITSLPILVKG-VLTAEDGSKLLSKE 249 (249)
Q Consensus 214 ~~tW~dl~wlr-~~~~lPivlKG-Il~~eDA~~A~~~~ 249 (249)
.-+|+.++.|+ +.++.||..=+ |.+++|++.+++.|
T Consensus 232 ~~d~~~~~~l~~~~~~iPIa~dE~i~~~~~~~~~i~~~ 269 (389)
T 3ozy_A 232 IDDIEGHRILRAQGTPVRIATGENLYTRNAFNDYIRND 269 (389)
T ss_dssp TTCHHHHHHHHTTCCSSEEEECTTCCHHHHHHHHHHTT
T ss_pred cccHHHHHHHHhcCCCCCEEeCCCCCCHHHHHHHHHcC
Confidence 34799999999 99999999876 56689999888754
No 164
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=56.30 E-value=74 Score=27.74 Aligned_cols=46 Identities=11% Similarity=0.112 Sum_probs=31.3
Q ss_pred CCCHHHHHhcCCCceeEEEccccCh------HHHHHHHHHHHHcCCcEEEEe
Q 025657 114 TSSVEEVSSTGPGIRFFQLYVTKHR------NVDAQLVKRAERAGFKAIALT 159 (249)
Q Consensus 114 s~sleeia~~~~~~~wfQlY~~~d~------~~~~~li~rA~~aG~~alvvT 159 (249)
..+.|++.+.+....-+.+|+..|. +...++.+.|++.|...++-.
T Consensus 111 ~~~ve~a~~~GAdaV~vlv~~~~d~~~~~~~~~i~~v~~~~~~~G~p~lv~~ 162 (304)
T 1to3_A 111 KINAQAVKRDGAKALKLLVLWRSDEDAQQRLNMVKEFNELCHSNGLLSIIEP 162 (304)
T ss_dssp SCCHHHHHHTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHTTTCEEEEEE
T ss_pred chhHHHHHHcCCCEEEEEEEcCCCccHHHHHHHHHHHHHHHHHcCCcEEEEE
Confidence 3788888877554344557776665 566677788888898866543
No 165
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=55.90 E-value=6.3 Score=33.31 Aligned_cols=109 Identities=19% Similarity=0.099 Sum_probs=64.2
Q ss_pred ccCCChhhHHHHHHHHhcCCcEEecCCCC-CC---HHHHHhcCCCceeEEEccccChHHHHHHHHHHHHcCCcEEEEeec
Q 025657 86 KMAHPEGECATARAASAAGTIMTLSSWAT-SS---VEEVSSTGPGIRFFQLYVTKHRNVDAQLVKRAERAGFKAIALTVD 161 (249)
Q Consensus 86 ~l~h~~gE~~~AraA~~~gi~~~lss~ss-~s---leeia~~~~~~~wfQlY~~~d~~~~~~li~rA~~aG~~alvvTvD 161 (249)
+..+++-=..+++++.+.|+..+==|+.+ .. |+.+++..|.. .+=. .-=.+.+-+++|.++|++-||-
T Consensus 20 r~~~~~~a~~~a~al~~gGi~~iEvt~~t~~a~~~I~~l~~~~p~~-~IGA----GTVlt~~~a~~ai~AGA~fivs--- 91 (217)
T 3lab_A 20 VIDDLVHAIPMAKALVAGGVHLLEVTLRTEAGLAAISAIKKAVPEA-IVGA----GTVCTADDFQKAIDAGAQFIVS--- 91 (217)
T ss_dssp CCSCGGGHHHHHHHHHHTTCCEEEEETTSTTHHHHHHHHHHHCTTS-EEEE----ECCCSHHHHHHHHHHTCSEEEE---
T ss_pred EcCCHHHHHHHHHHHHHcCCCEEEEeCCCccHHHHHHHHHHHCCCC-eEee----ccccCHHHHHHHHHcCCCEEEe---
Confidence 33355555699999999999987434333 33 44445555531 1110 1112456678888999988753
Q ss_pred CCCCCCchhhhhccCCCCCccccccccccccCCCCCCCCchhhhHhhhhcCCCCCHHHHHHHHHhCCCCEEEEccCCHHH
Q 025657 162 TPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKGVLTAED 241 (249)
Q Consensus 162 ~p~~g~Re~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tW~dl~wlr~~~~lPivlKGIl~~eD 241 (249)
|.. +.. +.+ +-.-.-+-.+|.+|++- |++|++|
T Consensus 92 -P~~-----------------~~e-----------------vi~-----------~~~~~~v~~~~~~~~~P-G~~TptE 124 (217)
T 3lab_A 92 -PGL-----------------TPE-----------------LIE-----------KAKQVKLDGQWQGVFLP-GVATASE 124 (217)
T ss_dssp -SSC-----------------CHH-----------------HHH-----------HHHHHHHHCSCCCEEEE-EECSHHH
T ss_pred -CCC-----------------cHH-----------------HHH-----------HHHHcCCCccCCCeEeC-CCCCHHH
Confidence 220 000 000 00001233468888887 9999999
Q ss_pred HHHHhhCC
Q 025657 242 GSKLLSKE 249 (249)
Q Consensus 242 A~~A~~~~ 249 (249)
+..|.++|
T Consensus 125 ~~~A~~~G 132 (217)
T 3lab_A 125 VMIAAQAG 132 (217)
T ss_dssp HHHHHHTT
T ss_pred HHHHHHcC
Confidence 99999987
No 166
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=54.71 E-value=15 Score=30.18 Aligned_cols=34 Identities=12% Similarity=0.220 Sum_probs=29.3
Q ss_pred CCHHHHHHHHHhCCCCEEEEc-cCCHHHHHHHhhCC
Q 025657 215 LNWKDVKWLQTITSLPILVKG-VLTAEDGSKLLSKE 249 (249)
Q Consensus 215 ~tW~dl~wlr~~~~lPivlKG-Il~~eDA~~A~~~~ 249 (249)
.+|+.++++++. +.||+.=| |-+++|+..++++|
T Consensus 174 ~~~~~i~~~~~~-~ipvia~GGI~s~~~~~~~~~~G 208 (234)
T 1yxy_A 174 PDVALIEALCKA-GIAVIAEGKIHSPEEAKKINDLG 208 (234)
T ss_dssp CCHHHHHHHHHT-TCCEEEESCCCSHHHHHHHHTTC
T ss_pred CCHHHHHHHHhC-CCCEEEECCCCCHHHHHHHHHCC
Confidence 367889999998 99999876 77799999999876
No 167
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=53.83 E-value=71 Score=28.57 Aligned_cols=34 Identities=12% Similarity=0.082 Sum_probs=24.8
Q ss_pred CHHHHHHHHHh-------CC---CCEEEE-ccCCHHHHHHHhhCC
Q 025657 216 NWKDVKWLQTI-------TS---LPILVK-GVLTAEDGSKLLSKE 249 (249)
Q Consensus 216 tW~dl~wlr~~-------~~---lPivlK-GIl~~eDA~~A~~~~ 249 (249)
+++-|..+++. .+ .||+.= ||.+++|+.+|+..|
T Consensus 255 ~~~~l~~v~~~~~~~~~~~~~~~ipvia~GGI~~~~dv~kalalG 299 (393)
T 2qr6_A 255 MATAIADVAAARRDYLDETGGRYVHIIADGSIENSGDVVKAIACG 299 (393)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSCCCEEEECSSCCSHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHHhHhhcCCcceEEEEECCCCCHHHHHHHHHcC
Confidence 44555555554 44 899885 599999999998766
No 168
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=53.72 E-value=7.4 Score=33.92 Aligned_cols=37 Identities=16% Similarity=0.256 Sum_probs=32.1
Q ss_pred CCCCHHHHHHHHHhCCCCEE---EEccCCHHHHHHHhhCC
Q 025657 213 RSLNWKDVKWLQTITSLPIL---VKGVLTAEDGSKLLSKE 249 (249)
Q Consensus 213 ~~~tW~dl~wlr~~~~lPiv---lKGIl~~eDA~~A~~~~ 249 (249)
...+|+-++++++..+.||+ .=||.+++|+..+.++|
T Consensus 192 ~~~~~~~i~~i~~~~~iPvi~~a~GGI~~~~d~~~~~~~G 231 (305)
T 2nv1_A 192 LGAPYELLLQIKKDGKLPVVNFAAGGVATPADAALMMQLG 231 (305)
T ss_dssp HTCCHHHHHHHHHHTSCSSCEEBCSCCCSHHHHHHHHHTT
T ss_pred ccccHHHHHHHHHhcCCCEEEEeccCCCCHHHHHHHHHcC
Confidence 35689999999999999997 67899999999998875
No 169
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=53.38 E-value=9.3 Score=35.36 Aligned_cols=73 Identities=14% Similarity=0.190 Sum_probs=44.9
Q ss_pred ccceeccccCCCCCCccceeecCcccccceeeccccccccCCChhhHHHHHHHHhcCCcEE-ecCCCCCCHHHHHhcCCC
Q 025657 48 RILFRPRILRDVSKIDMTTTVLGFNISMPIMIAPTAFQKMAHPEGECATARAASAAGTIMT-LSSWATSSVEEVSSTGPG 126 (249)
Q Consensus 48 ~~~l~pr~l~~v~~~d~st~llG~~~~~Pi~iaP~g~~~l~h~~gE~~~AraA~~~gi~~~-lss~ss~sleeia~~~~~ 126 (249)
++.+.|+. +..+.+.++|+++|.++.-||++|. ++ ..++|. ..+..++|..++ ++|....+ ..-.|.
T Consensus 69 ~~~~~~~~-~~~~~~~l~v~~~Gl~f~NPvglAA----G~-dk~~~~--~~~l~~lGfG~vevgtvT~~p----q~GNp~ 136 (415)
T 3i65_A 69 KYNILPYD-TSNDSIYACTNIKHLDFINPFGVAA----GF-DKNGVC--IDSILKLGFSFIEIGTITPRG----QTGNAK 136 (415)
T ss_dssp HTTCSCCC-CSCCCGGGCEEETTEEESSSEEECT----TS-STTCSS--HHHHHTTTCSEEEEEEECSSC----BCCSCS
T ss_pred HhcCCCcc-cccccccccEEECCEECCCCCEECC----CC-CCCHHH--HHHHHHcCCCeEEeCcccCCc----CCCCCC
Confidence 34455543 2335567899999999999999987 22 233443 255567887654 56554333 222456
Q ss_pred ceeEEE
Q 025657 127 IRFFQL 132 (249)
Q Consensus 127 ~~wfQl 132 (249)
|+.|.|
T Consensus 137 PRlfrl 142 (415)
T 3i65_A 137 PRIFRD 142 (415)
T ss_dssp CCEEEE
T ss_pred CeEEec
Confidence 788876
No 170
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=53.32 E-value=59 Score=29.05 Aligned_cols=45 Identities=13% Similarity=0.093 Sum_probs=27.7
Q ss_pred eeecCcccccceeeccccccccCCChh---hHHHHHHHHhcCCcEEec
Q 025657 66 TTVLGFNISMPIMIAPTAFQKMAHPEG---ECATARAASAAGTIMTLS 110 (249)
Q Consensus 66 t~llG~~~~~Pi~iaP~g~~~l~h~~g---E~~~AraA~~~gi~~~ls 110 (249)
.+|=+.++.-.|++|||+...-..++| |..+..-++.+|..++++
T Consensus 9 ~~ig~~~l~NRiv~aPm~~~~a~~~~g~~t~~~~~~y~~rAg~GLiit 56 (364)
T 1vyr_A 9 LKVGAVTAPNRVFMAPLTRLRSIEPGDIPTPLMGEYYRQRASAGLIIS 56 (364)
T ss_dssp EEETTEEESSSEEECCCCCCCCBTTTTBCCHHHHHHHHHTTTSSEEEE
T ss_pred eeECCEEECCccEECCCCCCcccCCCCCCCHHHHHHHHHHhcCCEEEE
Confidence 456677888999999988653212333 555555555556555543
No 171
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=53.03 E-value=7.9 Score=33.46 Aligned_cols=36 Identities=22% Similarity=0.491 Sum_probs=31.4
Q ss_pred CCCHHHHHHHHHhCCCCEE---EEccCCHHHHHHHhhCC
Q 025657 214 SLNWKDVKWLQTITSLPIL---VKGVLTAEDGSKLLSKE 249 (249)
Q Consensus 214 ~~tW~dl~wlr~~~~lPiv---lKGIl~~eDA~~A~~~~ 249 (249)
..+++.++++++..+.|++ .=||.+++|+..+.++|
T Consensus 193 ~~~~~~i~~l~~~~~~pvi~~a~GGI~~~e~i~~~~~aG 231 (297)
T 2zbt_A 193 GAPFELVKWVHDHGRLPVVNFAAGGIATPADAALMMHLG 231 (297)
T ss_dssp TCCHHHHHHHHHHSSCSSCEEBCSSCCSHHHHHHHHHTT
T ss_pred hhhHHHHHHHHHhcCCCcEEEeeCCCCCHHHHHHHHHcC
Confidence 4578999999999999985 66788999999998876
No 172
>1rvg_A Fructose-1,6-bisphosphate aldolase; class II aldolase, metal-depdendent aldolase, lyase; 2.00A {Thermus aquaticus} SCOP: c.1.10.2 PDB: 1rv8_A 2fjk_A*
Probab=52.70 E-value=17 Score=32.20 Aligned_cols=38 Identities=16% Similarity=0.287 Sum_probs=33.8
Q ss_pred CCCCCHHHHHHHHHhCCCCEEEEccC-----------------------CHHHHHHHhhCC
Q 025657 212 DRSLNWKDVKWLQTITSLPILVKGVL-----------------------TAEDGSKLLSKE 249 (249)
Q Consensus 212 ~~~~tW~dl~wlr~~~~lPivlKGIl-----------------------~~eDA~~A~~~~ 249 (249)
.|.|+++-|+.|++..+.|||+=|=. ..|+-++|+++|
T Consensus 186 ~p~L~~~~L~~I~~~~~vpLVlHGgSsv~~~~~~~~~~~gg~~~~~~G~p~e~i~~ai~~G 246 (305)
T 1rvg_A 186 RPFIDHARLERIARLVPAPLVLHGASAVPPELVERFRASGGEIGEAAGIHPEDIKKAISLG 246 (305)
T ss_dssp SCCCCHHHHHHHHHHCCSCEEECSCCCCCHHHHHHHHHTTCCCCSCBCCCHHHHHHHHHTT
T ss_pred CCccCHHHHHHHHHhcCCCEEEeCCCCCcHHHHHHHHhhccccccCCCCCHHHHHHHHHCC
Confidence 47899999999999999999999987 678888888876
No 173
>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*
Probab=51.84 E-value=36 Score=39.20 Aligned_cols=106 Identities=18% Similarity=0.291 Sum_probs=66.2
Q ss_pred ceeccccCCC-CC--Cccc-eeecCcccccceeeccccccccCCChhhHHHHHHHHhcCCcEEecCCCCCCHHHHH----
Q 025657 50 LFRPRILRDV-SK--IDMT-TTVLGFNISMPIMIAPTAFQKMAHPEGECATARAASAAGTIMTLSSWATSSVEEVS---- 121 (249)
Q Consensus 50 ~l~pr~l~~v-~~--~d~s-t~llG~~~~~Pi~iaP~g~~~l~h~~gE~~~AraA~~~gi~~~lss~ss~sleeia---- 121 (249)
.|.|++.+.- .. .++. +.+|| ..||+.+||+... ..-.+|.|..++|-.-.++..+-.+.|.+.
T Consensus 402 ~f~P~l~~~~~g~~~~~t~~~~~lg---~~PIi~a~M~~~~-----s~~~LaaAVs~AGglG~l~~~g~~~~~~l~~~i~ 473 (3089)
T 3zen_D 402 SYAPTVVKLPDGSVKLETKFTRLTG---RSPILLAGMTPTT-----VDAKIVAAAANAGHWAELAGGGQVTEQIFNDRIA 473 (3089)
T ss_dssp GGCCEEEECTTCCEEEECHHHHHHS---SCSEEECCCHHHH-----TSHHHHHHHHHTTCEEEECSTTCCSHHHHHHHHH
T ss_pred ccCCcccccCCCcccccchhhhhcC---CCCEEeCCCcCCc-----CCHHHHHHHHhCCCceeecCCCCCCHHHHHHHHH
Confidence 4778776632 22 2333 45788 7899999988532 123588889999998888776665666543
Q ss_pred ---hcCC-Ccee--EEEccccCh---H-HHHHHHHHHHHcC--CcEEEEeecCC
Q 025657 122 ---STGP-GIRF--FQLYVTKHR---N-VDAQLVKRAERAG--FKAIALTVDTP 163 (249)
Q Consensus 122 ---~~~~-~~~w--fQlY~~~d~---~-~~~~li~rA~~aG--~~alvvTvD~p 163 (249)
+..+ +..+ =-+|+.... + -..++++.+.++| +.+++++.|.|
T Consensus 474 ~~r~~~~~~~p~~vNl~~~~p~~~~~~~g~~~~~~~~~~~g~~vdgv~~~aG~P 527 (3089)
T 3zen_D 474 ELETLLEPGRAIQFNTLFLDPYLWKLQVGGKRLVQRARQSGAPIDGLVVSAGIP 527 (3089)
T ss_dssp HHHHHSCTTCCCEEEEECSCHHHHHHHHHHHHHHHHHHHTTCSCCEEEEESSCC
T ss_pred HHHHhcCCCCceeechhhcChhhhhhccCHHHHHHHHHHcCCCceEEEEeCCCC
Confidence 2222 2222 123432221 1 1147899999999 66799988887
No 174
>1gvf_A Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; HET: PGH; 1.45A {Escherichia coli} SCOP: c.1.10.2
Probab=51.48 E-value=11 Score=33.11 Aligned_cols=38 Identities=8% Similarity=0.281 Sum_probs=33.2
Q ss_pred CCCCCHHHHHHHHHhCCCCEEEEccC--CHHHHHHHhhCC
Q 025657 212 DRSLNWKDVKWLQTITSLPILVKGVL--TAEDGSKLLSKE 249 (249)
Q Consensus 212 ~~~~tW~dl~wlr~~~~lPivlKGIl--~~eDA~~A~~~~ 249 (249)
.|.|+++-|+.|++..+.|||+=|=. ..||-++|+++|
T Consensus 186 ~p~Ld~~~L~~I~~~~~vpLVlHGgSG~~~e~i~~ai~~G 225 (286)
T 1gvf_A 186 TPKIDFQRLAEIREVVDVPLVLHGASDVPDEFVRRTIELG 225 (286)
T ss_dssp CCCCCHHHHHHHHHHCCSCEEECCCTTCCHHHHHHHHHTT
T ss_pred CCccCHHHHHHHHHhcCCCEEEECCCCCCHHHHHHHHHCC
Confidence 47899999999999999999999854 667788888876
No 175
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=51.47 E-value=52 Score=27.00 Aligned_cols=33 Identities=27% Similarity=0.154 Sum_probs=26.8
Q ss_pred HHHHHHHHHhC-CCCEEEEccCCHHHHHHHhhCC
Q 025657 217 WKDVKWLQTIT-SLPILVKGVLTAEDGSKLLSKE 249 (249)
Q Consensus 217 W~dl~wlr~~~-~lPivlKGIl~~eDA~~A~~~~ 249 (249)
.+.++++|+.. +.||++=|=.++|.+..++++|
T Consensus 161 l~~i~~~~~~~~~~pi~v~GGI~~~ni~~~~~aG 194 (228)
T 1h1y_A 161 MEKVRALRKKYPSLDIEVDGGLGPSTIDVAASAG 194 (228)
T ss_dssp HHHHHHHHHHCTTSEEEEESSCSTTTHHHHHHHT
T ss_pred HHHHHHHHHhcCCCCEEEECCcCHHHHHHHHHcC
Confidence 46678888888 8999988877789998887765
No 176
>1rvk_A Isomerase/lactonizing enzyme; enolase superfamily, MR.GI-17937161, NYSGXRC, target T1522, structural genomics, PSI; 1.70A {Agrobacterium tumefaciens} SCOP: c.1.11.2 d.54.1.1
Probab=50.32 E-value=37 Score=30.15 Aligned_cols=36 Identities=11% Similarity=0.208 Sum_probs=30.3
Q ss_pred CCCHHHHHHHHHhCCCCEEEEc-cCC-HHHHHHHhhCC
Q 025657 214 SLNWKDVKWLQTITSLPILVKG-VLT-AEDGSKLLSKE 249 (249)
Q Consensus 214 ~~tW~dl~wlr~~~~lPivlKG-Il~-~eDA~~A~~~~ 249 (249)
.-+|+.++.|++.++.||+.=+ +.+ ++|++.+++.|
T Consensus 237 ~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~i~~~ 274 (382)
T 1rvk_A 237 EQSLSSYKWLSDNLDIPVVGPESAAGKHWHRAEWIKAG 274 (382)
T ss_dssp TTCHHHHHHHHHHCSSCEEECSSCSSHHHHHHHHHHTT
T ss_pred hhhHHHHHHHHhhCCCCEEEeCCccCcHHHHHHHHHcC
Confidence 4579999999999999999876 457 89999988764
No 177
>3jva_A Dipeptide epimerase; enolase superfamily, isomerase; 1.70A {Enterococcus faecalis V583} PDB: 3jw7_A* 3jzu_A* 3k1g_A* 3kum_A*
Probab=50.27 E-value=23 Score=31.44 Aligned_cols=35 Identities=17% Similarity=0.345 Sum_probs=29.0
Q ss_pred CCHHHHHHHHHhCCCCEEEEc-cCCHHHHHHHhhCC
Q 025657 215 LNWKDVKWLQTITSLPILVKG-VLTAEDGSKLLSKE 249 (249)
Q Consensus 215 ~tW~dl~wlr~~~~lPivlKG-Il~~eDA~~A~~~~ 249 (249)
-+|+.++.|++.++.||..=+ +.+++|++.+++.|
T Consensus 221 ~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~ 256 (354)
T 3jva_A 221 RDLEGLKYVTSQVNTTIMADESCFDAQDALELVKKG 256 (354)
T ss_dssp TCHHHHHHHHHHCSSEEEESTTCCSHHHHHHHHHHT
T ss_pred hhHHHHHHHHHhCCCCEEEcCCcCCHHHHHHHHHcC
Confidence 478999999999999999854 67899998887643
No 178
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=50.07 E-value=21 Score=32.24 Aligned_cols=59 Identities=17% Similarity=0.196 Sum_probs=41.8
Q ss_pred hhHHHHHHHHhcCCcEEecCCCCCCHHHHHhcCCCceeEEEccccChHHH-HHHHHHHHHcCCcEE
Q 025657 92 GECATARAASAAGTIMTLSSWATSSVEEVSSTGPGIRFFQLYVTKHRNVD-AQLVKRAERAGFKAI 156 (249)
Q Consensus 92 gE~~~AraA~~~gi~~~lss~ss~sleeia~~~~~~~wfQlY~~~d~~~~-~~li~rA~~aG~~al 156 (249)
|-..+.+.+.+.|++++.+-+...+++.+++.. .|+|+ .-++.. ..|++.+.+.|...+
T Consensus 158 gl~~l~~~~~e~Gl~~~te~~d~~~~~~l~~~v---d~lkI---gAr~~~n~~LL~~va~~~kPVi 217 (350)
T 1vr6_A 158 GLEYLREAADKYGMYVVTEALGEDDLPKVAEYA---DIIQI---GARNAQNFRLLSKAGSYNKPVL 217 (350)
T ss_dssp HHHHHHHHHHHHTCEEEEECSSGGGHHHHHHHC---SEEEE---CGGGTTCHHHHHHHHTTCSCEE
T ss_pred HHHHHHHHHHHcCCcEEEEeCCHHHHHHHHHhC---CEEEE---CcccccCHHHHHHHHccCCcEE
Confidence 334788888899999998888888888887762 58998 444433 356777666665444
No 179
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=49.10 E-value=49 Score=28.54 Aligned_cols=83 Identities=14% Similarity=0.035 Sum_probs=48.2
Q ss_pred ceeeccccccccCCChhhHHHHHHHHhcCCcE--EecCCC---CCCHHHHH-------hcCC--CceeEEEccccChHHH
Q 025657 76 PIMIAPTAFQKMAHPEGECATARAASAAGTIM--TLSSWA---TSSVEEVS-------STGP--GIRFFQLYVTKHRNVD 141 (249)
Q Consensus 76 Pi~iaP~g~~~l~h~~gE~~~AraA~~~gi~~--~lss~s---s~sleeia-------~~~~--~~~wfQlY~~~d~~~~ 141 (249)
|.++.|+. .+-++.++=..+++---+.|+-- +.||.+ +.|.||=. +... -+.....- ..+-..+
T Consensus 7 ~a~vTPf~-dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg-~~~t~~a 84 (294)
T 2ehh_A 7 VALITPFK-EGEVDYEALGNLIEFHVDNGTDAILVCGTTGESPTLTFEEHEKVIEFAVKRAAGRIKVIAGTG-GNATHEA 84 (294)
T ss_dssp EECCCCEE-TTEECHHHHHHHHHHHHTTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECC-CSCHHHH
T ss_pred eeeecCcC-CCCcCHHHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecC-CCCHHHH
Confidence 45566765 55445555556666666777743 445533 34554432 2112 23445542 1244567
Q ss_pred HHHHHHHHHcCCcEEEEee
Q 025657 142 AQLVKRAERAGFKAIALTV 160 (249)
Q Consensus 142 ~~li~rA~~aG~~alvvTv 160 (249)
.++.++|+++|+.++++..
T Consensus 85 i~la~~A~~~Gadavlv~~ 103 (294)
T 2ehh_A 85 VHLTAHAKEVGADGALVVV 103 (294)
T ss_dssp HHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHhcCCCEEEECC
Confidence 7888889999999988873
No 180
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A
Probab=48.92 E-value=19 Score=30.53 Aligned_cols=31 Identities=16% Similarity=0.256 Sum_probs=28.0
Q ss_pred CHHHHHHHHHhC-CCCEEEEc-cCCHHHHHHHh
Q 025657 216 NWKDVKWLQTIT-SLPILVKG-VLTAEDGSKLL 246 (249)
Q Consensus 216 tW~dl~wlr~~~-~lPivlKG-Il~~eDA~~A~ 246 (249)
+.+-|+.+|+.+ +.|+++=| |.++|+|+++.
T Consensus 167 ~~~~i~~i~~~~~~~Pv~vGGGI~t~e~a~~~~ 199 (228)
T 3vzx_A 167 DIEAVKKTKAVLETSTLFYGGGIKDAETAKQYA 199 (228)
T ss_dssp CHHHHHHHHHHCSSSEEEEESSCCSHHHHHHHH
T ss_pred CHHHHHHHHHhcCCCCEEEeCCCCCHHHHHHHH
Confidence 678899999999 79999975 99999999887
No 181
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=48.84 E-value=19 Score=29.33 Aligned_cols=34 Identities=12% Similarity=0.229 Sum_probs=29.7
Q ss_pred CHHHHHHHHHhCCCCEEEEc-cCCHHHHHHHhhCC
Q 025657 216 NWKDVKWLQTITSLPILVKG-VLTAEDGSKLLSKE 249 (249)
Q Consensus 216 tW~dl~wlr~~~~lPivlKG-Il~~eDA~~A~~~~ 249 (249)
+|+.++++++..+.||+.=| |.+++|+..++++|
T Consensus 163 ~~~~~~~~~~~~~ipvia~GGI~~~~~~~~~~~~G 197 (223)
T 1y0e_A 163 DFQFLKDVLQSVDAKVIAEGNVITPDMYKRVMDLG 197 (223)
T ss_dssp HHHHHHHHHHHCCSEEEEESSCCSHHHHHHHHHTT
T ss_pred cHHHHHHHHhhCCCCEEEecCCCCHHHHHHHHHcC
Confidence 47789999999999999876 66999999999876
No 182
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=48.70 E-value=9.4 Score=34.57 Aligned_cols=34 Identities=18% Similarity=0.217 Sum_probs=29.6
Q ss_pred CHHHHHHHHHhCCCCEEEEccCCHHHHHHHhhCC
Q 025657 216 NWKDVKWLQTITSLPILVKGVLTAEDGSKLLSKE 249 (249)
Q Consensus 216 tW~dl~wlr~~~~lPivlKGIl~~eDA~~A~~~~ 249 (249)
.|+.++.+|+.++.||+.=|=.+++||+.+++.|
T Consensus 289 ~~~~~~~vr~~~~iPvi~~G~i~~~~a~~~l~~g 322 (376)
T 1icp_A 289 CTESLVPMRKAYKGTFIVAGGYDREDGNRALIED 322 (376)
T ss_dssp CCCCSHHHHHHCCSCEEEESSCCHHHHHHHHHTT
T ss_pred cHHHHHHHHHHcCCCEEEeCCCCHHHHHHHHHCC
Confidence 5677899999999999987766999999999865
No 183
>3ks6_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Agrobacterium tumefaciens str} PDB: 3ks5_A*
Probab=48.69 E-value=19 Score=30.27 Aligned_cols=73 Identities=18% Similarity=0.159 Sum_probs=44.3
Q ss_pred hhhHHHHHHHHhcCC--cEEecCCCCCCHHHHHhcCCCceeEEEc------------------------cccChHHHHHH
Q 025657 91 EGECATARAASAAGT--IMTLSSWATSSVEEVSSTGPGIRFFQLY------------------------VTKHRNVDAQL 144 (249)
Q Consensus 91 ~gE~~~AraA~~~gi--~~~lss~ss~sleeia~~~~~~~wfQlY------------------------~~~d~~~~~~l 144 (249)
+-+..+.+.-++.|. ..+++|+....++.+.+..|...-..++ .......+.++
T Consensus 117 ~~~~~v~~~l~~~~~~~~v~~~SF~~~~l~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (250)
T 3ks6_A 117 GFVALVIAGLERHSMLERTTFSSFLLASMDELWKATTRPRLWLVSPSVLQQLGPGAVIETAIAHSIHEIGVHIDTADAGL 196 (250)
T ss_dssp THHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCCSCEEEEECHHHHHHHHHHHHHHHHHHTTCCEEEEEGGGCCHHH
T ss_pred HHHHHHHHHHHhcCCCCCEEEEeCCHHHHHHHHHHCCCCcEEEEecccccccchhHHHHHHHhcCCCEEecchhhCCHHH
Confidence 334466666666654 5677777777777777666532211111 11122345577
Q ss_pred HHHHHHcCCcEEEEeecCC
Q 025657 145 VKRAERAGFKAIALTVDTP 163 (249)
Q Consensus 145 i~rA~~aG~~alvvTvD~p 163 (249)
+++++++|.+..+.|||.+
T Consensus 197 v~~~~~~G~~V~~WTvn~~ 215 (250)
T 3ks6_A 197 MAQVQAAGLDFGCWAAHTP 215 (250)
T ss_dssp HHHHHHTTCEEEEECCCSH
T ss_pred HHHHHHCCCEEEEEeCCCH
Confidence 8888888888888888754
No 184
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=48.66 E-value=48 Score=28.53 Aligned_cols=83 Identities=18% Similarity=0.063 Sum_probs=48.3
Q ss_pred ceeeccccccccCCChhhHHHHHHHHhcCCcE--EecCCC---CCCHHHH-------HhcCC--CceeEEEccccChHHH
Q 025657 76 PIMIAPTAFQKMAHPEGECATARAASAAGTIM--TLSSWA---TSSVEEV-------SSTGP--GIRFFQLYVTKHRNVD 141 (249)
Q Consensus 76 Pi~iaP~g~~~l~h~~gE~~~AraA~~~gi~~--~lss~s---s~sleei-------a~~~~--~~~wfQlY~~~d~~~~ 141 (249)
|.++.|+. .+-++.++=..+.+---+.|+-- +.||.+ +.|.||= .+... -+.....- ..+-+.+
T Consensus 7 ~a~vTPf~-dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg-~~~t~~a 84 (289)
T 2yxg_A 7 PAIITPFK-NKEVDFDGLEENINFLIENGVSGIVAVGTTGESPTLSHEEHKKVIEKVVDVVNGRVQVIAGAG-SNCTEEA 84 (289)
T ss_dssp EBCCCCEE-TTEECHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECC-CSSHHHH
T ss_pred eeeecCcC-CCCcCHHHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCC-CCCHHHH
Confidence 44566765 55445555556666666677743 445533 3455443 22222 23445542 2244667
Q ss_pred HHHHHHHHHcCCcEEEEee
Q 025657 142 AQLVKRAERAGFKAIALTV 160 (249)
Q Consensus 142 ~~li~rA~~aG~~alvvTv 160 (249)
.++.+.|+++|+.++++..
T Consensus 85 i~la~~a~~~Gadavlv~~ 103 (289)
T 2yxg_A 85 IELSVFAEDVGADAVLSIT 103 (289)
T ss_dssp HHHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHHHhcCCCEEEECC
Confidence 7888999999999988873
No 185
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=48.05 E-value=27 Score=30.28 Aligned_cols=62 Identities=26% Similarity=0.299 Sum_probs=46.0
Q ss_pred ChhhHHHHHHHHhcCCcEEecCCCCCCHHHHHhcCCCceeEEEccccChHHH-HHHHHHHHHcCCcEEE
Q 025657 90 PEGECATARAASAAGTIMTLSSWATSSVEEVSSTGPGIRFFQLYVTKHRNVD-AQLVKRAERAGFKAIA 157 (249)
Q Consensus 90 ~~gE~~~AraA~~~gi~~~lss~ss~sleeia~~~~~~~wfQlY~~~d~~~~-~~li~rA~~aG~~alv 157 (249)
.+|-..+.+.+.+.|+++..+-+...+++.+++.. .|+|+ .-++.. ..|++.+-+.|...++
T Consensus 88 ~~gl~~l~~~~~~~Gl~~~te~~d~~~~~~l~~~v---d~~kI---gs~~~~n~~ll~~~a~~~kPV~l 150 (276)
T 1vs1_A 88 LEGLKLLRRAGDEAGLPVVTEVLDPRHVETVSRYA---DMLQI---GARNMQNFPLLREVGRSGKPVLL 150 (276)
T ss_dssp HHHHHHHHHHHHHHTCCEEEECCCGGGHHHHHHHC---SEEEE---CGGGTTCHHHHHHHHHHTCCEEE
T ss_pred HHHHHHHHHHHHHcCCcEEEecCCHHHHHHHHHhC---CeEEE---CcccccCHHHHHHHHccCCeEEE
Confidence 44556889999999999999989888999888763 59998 444322 3577777777765543
No 186
>3ceu_A Thiamine phosphate pyrophosphorylase; TIM barrel-like protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacteroides thetaiotaomicron vpi-5482}
Probab=47.98 E-value=17 Score=29.70 Aligned_cols=37 Identities=5% Similarity=0.070 Sum_probs=32.5
Q ss_pred CCCCHHHHHHHHHh--CCCCEEEEccCCHHHHHHHhhCC
Q 025657 213 RSLNWKDVKWLQTI--TSLPILVKGVLTAEDGSKLLSKE 249 (249)
Q Consensus 213 ~~~tW~dl~wlr~~--~~lPivlKGIl~~eDA~~A~~~~ 249 (249)
+.++|+.++++++. .+.|++.=|=.+++++..++++|
T Consensus 127 ~~~g~~~l~~~~~~~~~~iPviaiGGI~~~nv~~~~~~G 165 (210)
T 3ceu_A 127 STYTAEELREAQKAKIIDSKVMALGGINEDNLLEIKDFG 165 (210)
T ss_dssp CCCCHHHHHHHHHTTCSSTTEEEESSCCTTTHHHHHHTT
T ss_pred CCCCHHHHHHHHHhcCCCCCEEEECCCCHHHHHHHHHhC
Confidence 46899999999998 68999999977899999998876
No 187
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=47.89 E-value=84 Score=27.23 Aligned_cols=85 Identities=13% Similarity=0.041 Sum_probs=48.8
Q ss_pred cceeeccccccccCCChhhHHHHHHHHhcCCc--EEecCCC---CCCHHHH-------HhcCC--CceeEEEccccChHH
Q 025657 75 MPIMIAPTAFQKMAHPEGECATARAASAAGTI--MTLSSWA---TSSVEEV-------SSTGP--GIRFFQLYVTKHRNV 140 (249)
Q Consensus 75 ~Pi~iaP~g~~~l~h~~gE~~~AraA~~~gi~--~~lss~s---s~sleei-------a~~~~--~~~wfQlY~~~d~~~ 140 (249)
.|.++.|+.-.+-++.++=..+++---+.|+- ++.||.+ +.|.||= .+... -+.+...- ..+-..
T Consensus 21 ~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg-~~st~~ 99 (304)
T 3cpr_A 21 GVAMVTPFTESGDIDIAAGREVAAYLVDKGLDSLVLAGTTGESPTTTAAEKLELLKAVREEVGDRAKLIAGVG-TNNTRT 99 (304)
T ss_dssp EEECCCCBCTTSCBCHHHHHHHHHHHHHTTCCEEEESSTTTTTTTSCHHHHHHHHHHHHHHHTTTSEEEEECC-CSCHHH
T ss_pred EEeeeccCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEecCC-CCCHHH
Confidence 35556665433333444444666666667774 3455533 4455543 22222 34455552 234566
Q ss_pred HHHHHHHHHHcCCcEEEEee
Q 025657 141 DAQLVKRAERAGFKAIALTV 160 (249)
Q Consensus 141 ~~~li~rA~~aG~~alvvTv 160 (249)
+.++.+.|+++|+.++++..
T Consensus 100 ai~la~~A~~~Gadavlv~~ 119 (304)
T 3cpr_A 100 SVELAEAAASAGADGLLVVT 119 (304)
T ss_dssp HHHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHHhcCCCEEEECC
Confidence 77899999999999998873
No 188
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=47.36 E-value=1.1e+02 Score=24.84 Aligned_cols=31 Identities=23% Similarity=0.160 Sum_probs=24.1
Q ss_pred EEEccccChHHHHHHHHHHHHcCCcEEEEee
Q 025657 130 FQLYVTKHRNVDAQLVKRAERAGFKAIALTV 160 (249)
Q Consensus 130 fQlY~~~d~~~~~~li~rA~~aG~~alvvTv 160 (249)
....+..|.....+.++.+.++|++.|=+.+
T Consensus 14 ~p~i~a~d~~~~~~~i~~~~~~G~d~i~l~~ 44 (230)
T 1rpx_A 14 SPSILSANFSKLGEQVKAIEQAGCDWIHVDV 44 (230)
T ss_dssp EEBGGGSCGGGHHHHHHHHHHTTCCCEEEEE
T ss_pred EEEeecCCHHHHHHHHHHHHHCCCCEEEEee
Confidence 3334556777788899999999999887776
No 189
>3gd6_A Muconate cycloisomerase; structural genomics, NYSGXRC, target 9375A, divergent enolase, lyase, PSI-2; 1.60A {Oceanobacillus iheyensis HTE831} PDB: 2oqy_A 3es8_A 3es7_A 3fyy_A 3hpf_A*
Probab=47.26 E-value=22 Score=32.04 Aligned_cols=34 Identities=18% Similarity=0.314 Sum_probs=30.0
Q ss_pred CCHHHHHHHHHhCCCCEEEEccCCHHHHHHHhhCC
Q 025657 215 LNWKDVKWLQTITSLPILVKGVLTAEDGSKLLSKE 249 (249)
Q Consensus 215 ~tW~dl~wlr~~~~lPivlKGIl~~eDA~~A~~~~ 249 (249)
-+|+.++.|++.++.|| =-.+.+++|++.+++.|
T Consensus 227 ~d~~~~~~l~~~~~iPI-dE~~~~~~~~~~~~~~~ 260 (391)
T 3gd6_A 227 NDFDGLYQLRLKTDYPI-SEHVWSFKQQQEMIKKD 260 (391)
T ss_dssp TCHHHHHHHHHHCSSCE-EEECCCHHHHHHHHHHT
T ss_pred hhHHHHHHHHHHcCCCc-CCCCCCHHHHHHHHHcC
Confidence 47999999999999999 88899999999988654
No 190
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=47.24 E-value=36 Score=30.29 Aligned_cols=34 Identities=6% Similarity=0.297 Sum_probs=29.4
Q ss_pred CHHHHHHHHHhCCCCEEEEc-cCCHHHHHHHhhCC
Q 025657 216 NWKDVKWLQTITSLPILVKG-VLTAEDGSKLLSKE 249 (249)
Q Consensus 216 tW~dl~wlr~~~~lPivlKG-Il~~eDA~~A~~~~ 249 (249)
+|+.++.|++.++.||+.=+ |.+++|++++++.|
T Consensus 225 ~~~~~~~l~~~~~iPI~~de~i~~~~~~~~~i~~~ 259 (379)
T 2rdx_A 225 SYEECQQVRRVADQPMKLDECVTGLHMAQRIVADR 259 (379)
T ss_dssp SHHHHHHHHTTCCSCEEECTTCCSHHHHHHHHHHT
T ss_pred CHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHcC
Confidence 89999999999999999876 55899999987654
No 191
>1gvf_A Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; HET: PGH; 1.45A {Escherichia coli} SCOP: c.1.10.2
Probab=47.16 E-value=24 Score=30.86 Aligned_cols=60 Identities=17% Similarity=0.175 Sum_probs=34.9
Q ss_pred HHHHHHHhcCCcEEecCCCCC----CHHHHH-------hcCCCceeEEEccccChHHHHHHHHHHHHcCCcEEEE
Q 025657 95 ATARAASAAGTIMTLSSWATS----SVEEVS-------STGPGIRFFQLYVTKHRNVDAQLVKRAERAGFKAIAL 158 (249)
Q Consensus 95 ~~AraA~~~gi~~~lss~ss~----sleeia-------~~~~~~~wfQlY~~~d~~~~~~li~rA~~aG~~alvv 158 (249)
++.+||++.+.|.+|...-+. .++.++ +..+-|..+.| |.....+.+.+|-++||+.+++
T Consensus 33 avl~AAe~~~sPvIlq~s~~~~~y~g~~~~~~~v~~~a~~~~VPValHl----DHg~~~e~i~~ai~~GFtSVMi 103 (286)
T 1gvf_A 33 AILEVCSEMRSPVILAGTPGTFKHIALEEIYALCSAYSTTYNMPLALHL----DHHESLDDIRRKVHAGVRSAMI 103 (286)
T ss_dssp HHHHHHHHHTCCCEEEECTTHHHHSCHHHHHHHHHHHHHHTTSCBEEEE----EEECCHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHhCCCEEEECChhHHhhcCHHHHHHHHHHHHHhCCCcEEEEc----CCCCCHHHHHHHHHcCCCeEEE
Confidence 777777777777776442221 233222 22234455665 6655567777777777777654
No 192
>2yzr_A Pyridoxal biosynthesis lyase PDXS; redox protein, pyridoxal phosphate, structural genomi NPPSFA; 2.30A {Methanocaldococcus jannaschii}
Probab=46.87 E-value=9.5 Score=34.26 Aligned_cols=34 Identities=18% Similarity=0.334 Sum_probs=28.9
Q ss_pred CHHHHHHHHHhCCCCEE---EEccCCHHHHHHHhhCC
Q 025657 216 NWKDVKWLQTITSLPIL---VKGVLTAEDGSKLLSKE 249 (249)
Q Consensus 216 tW~dl~wlr~~~~lPiv---lKGIl~~eDA~~A~~~~ 249 (249)
+++-|+++++..+.|++ .=||.+++||.++.++|
T Consensus 228 ~lell~~i~~~~~IPVV~VAeGGI~Tpeda~~~l~~G 264 (330)
T 2yzr_A 228 LYEVLLEVKKLGRLPVVNFAAGGVATPADAALMMQLG 264 (330)
T ss_dssp HHHHHHHHHHHTSCSSEEEECSCCCSHHHHHHHHHTT
T ss_pred hHHHHHHHHHhCCCCeEEEEECCCCCHHHHHHHHHcC
Confidence 34778899998899985 66999999999999876
No 193
>2jz7_A Selenium binding protein; NMR {Methanococcus vannielii}
Probab=46.87 E-value=17 Score=26.01 Aligned_cols=27 Identities=11% Similarity=0.192 Sum_probs=20.3
Q ss_pred hHHHHHHHHHHHHcCCcEEE-EeecCCC
Q 025657 138 RNVDAQLVKRAERAGFKAIA-LTVDTPR 164 (249)
Q Consensus 138 ~~~~~~li~rA~~aG~~alv-vTvD~p~ 164 (249)
.+...+|+++|++.|+.|++ +-+|+..
T Consensus 34 ~~A~~rm~e~A~~lGAnAVVgvr~d~~~ 61 (81)
T 2jz7_A 34 DEIVENLRKQVKAKGGMGLIAFRITCAD 61 (81)
T ss_dssp HHHHHHHHHHHHHTTCCEEECCCCCCCS
T ss_pred HHHHHHHHHHHHHcCCCEEEEEEEEccc
Confidence 34667999999999999976 4455433
No 194
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=46.49 E-value=49 Score=27.76 Aligned_cols=135 Identities=19% Similarity=0.184 Sum_probs=0.0
Q ss_pred HHHHHHhcCCcEEecCCCCCCHHHHHh---cCCCceeEEEccccChHHHHHHHHHHHHcCCcEEEEeec--------CCC
Q 025657 96 TARAASAAGTIMTLSSWATSSVEEVSS---TGPGIRFFQLYVTKHRNVDAQLVKRAERAGFKAIALTVD--------TPR 164 (249)
Q Consensus 96 ~AraA~~~gi~~~lss~ss~sleeia~---~~~~~~wfQlY~~~d~~~~~~li~rA~~aG~~alvvTvD--------~p~ 164 (249)
+.+.+++..+|++++ .+-.++|++.+ .+....-+-=...+|+++..++.++- |-..+++.+| ...
T Consensus 67 i~~i~~~~~~pl~vG-GGIrs~e~~~~~l~~GadkVii~t~a~~~p~li~e~~~~~---g~q~iv~~iD~~~~~~~~v~~ 142 (243)
T 4gj1_A 67 IEKLAKEVSVNLQVG-GGIRSKEEVKALLDCGVKRVVIGSMAIKDATLCLEILKEF---GSEAIVLALDTILKEDYVVAV 142 (243)
T ss_dssp HHHHHHHCCSEEEEE-SSCCCHHHHHHHHHTTCSEEEECTTTTTCHHHHHHHHHHH---CTTTEEEEEEEEESSSEEEC-
T ss_pred HHHHHHhcCCCeEec-cccccHHHHHHHHHcCCCEEEEccccccCCchHHHHHhcc---cCceEEEEEEEEeCCCCEEEe
Q ss_pred CCCchhhhhccCCCCCccccccccccccCCCCCCCCchhhhHhhhhcCCCCCHHHHHHHHHhC-CCCEEE-EccCCHHHH
Q 025657 165 LGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTIT-SLPILV-KGVLTAEDG 242 (249)
Q Consensus 165 ~g~Re~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tW~dl~wlr~~~-~lPivl-KGIl~~eDA 242 (249)
.||++.--.+-..+-..+.-.....+-+-.....+... ..+.+-++.+++.+ +.||+. =||-+.+|-
T Consensus 143 ~gw~~~~~~~~~~~~~~~~~~g~~eil~t~Id~DGt~~-----------G~d~~l~~~l~~~~~~ipviasGGv~~~~Dl 211 (243)
T 4gj1_A 143 NAWQEASDKKLMEVLDFYSNKGLKHILCTDISKDGTMQ-----------GVNVRLYKLIHEIFPNICIQASGGVASLKDL 211 (243)
T ss_dssp -------CCBHHHHHHHHHTTTCCEEEEEETTC----------------CCCHHHHHHHHHHCTTSEEEEESCCCSHHHH
T ss_pred cCceecccchHHHHHHHHhhcCCcEEEeeeeccccccc-----------CCCHHHHHHHHHhcCCCCEEEEcCCCCHHHH
Q ss_pred HHH
Q 025657 243 SKL 245 (249)
Q Consensus 243 ~~A 245 (249)
+..
T Consensus 212 ~~l 214 (243)
T 4gj1_A 212 ENL 214 (243)
T ss_dssp HHT
T ss_pred HHH
No 195
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=46.36 E-value=66 Score=27.70 Aligned_cols=83 Identities=17% Similarity=0.041 Sum_probs=45.4
Q ss_pred ceeeccccccccCCChhhHHHHHHHHhcCCc--EEecCCC---CCCHHHHH-------hcCCCceeEEEccccChHHHHH
Q 025657 76 PIMIAPTAFQKMAHPEGECATARAASAAGTI--MTLSSWA---TSSVEEVS-------STGPGIRFFQLYVTKHRNVDAQ 143 (249)
Q Consensus 76 Pi~iaP~g~~~l~h~~gE~~~AraA~~~gi~--~~lss~s---s~sleeia-------~~~~~~~wfQlY~~~d~~~~~~ 143 (249)
|.++.|+.-.+-++.++=..+++---+.|+- ++.||.+ +.|.||=. +...+ .+...- ..+-..+.+
T Consensus 5 ~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~eEr~~v~~~~~~~~~g-viaGvg-~~~t~~ai~ 82 (293)
T 1w3i_A 5 TPIITPFTKDNRIDKEKLKIHAENLIRKGIDKLFVNGTTGLGPSLSPEEKLENLKAVYDVTNK-IIFQVG-GLNLDDAIR 82 (293)
T ss_dssp EECCCCBCTTSSBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHTTCSC-EEEECC-CSCHHHHHH
T ss_pred EEeeCCCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHcCC-EEEecC-CCCHHHHHH
Confidence 4455665433333444444666666667764 3445533 34555432 22334 344442 124456678
Q ss_pred HHHHHHHcCCcEEEEee
Q 025657 144 LVKRAERAGFKAIALTV 160 (249)
Q Consensus 144 li~rA~~aG~~alvvTv 160 (249)
+.+.|+++|+.++++..
T Consensus 83 la~~A~~~Gadavlv~~ 99 (293)
T 1w3i_A 83 LAKLSKDFDIVGIASYA 99 (293)
T ss_dssp HHHHGGGSCCSEEEEEC
T ss_pred HHHHHHhcCCCEEEEcC
Confidence 88888889999988873
No 196
>3rjz_A N-type ATP pyrophosphatase superfamily; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein; 2.30A {Pyrococcus furiosus} SCOP: c.26.2.1 PDB: 3h7e_A 3rk0_A* 3rk1_A* 1ru8_A 2d13_A
Probab=45.72 E-value=24 Score=29.97 Aligned_cols=84 Identities=17% Similarity=0.160 Sum_probs=45.6
Q ss_pred cccccceeeccccccccCCChhh-HHHHHHHHhcCCcEEecC-CCCC----CHHHHHhcCC----CceeEEEccccChHH
Q 025657 71 FNISMPIMIAPTAFQKMAHPEGE-CATARAASAAGTIMTLSS-WATS----SVEEVSSTGP----GIRFFQLYVTKHRNV 140 (249)
Q Consensus 71 ~~~~~Pi~iaP~g~~~l~h~~gE-~~~AraA~~~gi~~~lss-~ss~----sleeia~~~~----~~~wfQlY~~~d~~~ 140 (249)
..+..|+.+-.+.+. .+.| ..+.++.++.|+-.++.- .-+. -+|.+++..+ .|.|- +|+
T Consensus 60 ~~LGIpl~~v~~~g~----~~~e~e~l~~~l~~~~i~~vv~Gdi~s~yqr~r~e~vc~~~gl~~~~PLW~-----~d~-- 128 (237)
T 3rjz_A 60 RALGIPLVKGFTQGE----KEKEVEDLKRVLSGLKIQGIVAGALASKYQRKRIEKVAKELGLEVYTPAWG-----RDA-- 128 (237)
T ss_dssp HHHTCCEEEEEC----------CHHHHHHHHTTSCCSEEECC---CCSHHHHHHHHHHHTTCEEECSSSS-----CCH--
T ss_pred HHcCCCEEEEECCCC----chHHHHHHHHHHHhcCCcEEEECCcchHHHHHHHHHHHHHcCCEEEccccC-----CCH--
Confidence 334456666554332 1222 356666666676554432 1111 2566664433 23332 343
Q ss_pred HHHHHHHHHHcCCcEEEEeecCCCCC
Q 025657 141 DAQLVKRAERAGFKAIALTVDTPRLG 166 (249)
Q Consensus 141 ~~~li~rA~~aG~~alvvTvD~p~~g 166 (249)
.+|++...++|+++++++||+..++
T Consensus 129 -~~Ll~e~i~~G~~aiiv~v~~~gL~ 153 (237)
T 3rjz_A 129 -KEYMRELLNLGFKIMVVGVSAYGLD 153 (237)
T ss_dssp -HHHHHHHHHTTCEEEEEEEESTTCC
T ss_pred -HHHHHHHHHCCCEEEEEEEecCCCC
Confidence 3677777899999999999987653
No 197
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=45.68 E-value=61 Score=27.95 Aligned_cols=34 Identities=15% Similarity=0.087 Sum_probs=24.3
Q ss_pred CHHHHHHHHHhCCCCEEEEcc-CCHHHHHHHhhCC
Q 025657 216 NWKDVKWLQTITSLPILVKGV-LTAEDGSKLLSKE 249 (249)
Q Consensus 216 tW~dl~wlr~~~~lPivlKGI-l~~eDA~~A~~~~ 249 (249)
+.+.++.+++..+.||++|-- ...+++..+.+.|
T Consensus 66 ~~~~i~~I~~~~~iPv~~k~r~g~~~~~~~~~a~G 100 (305)
T 2nv1_A 66 DPTIVEEVMNAVSIPVMAKARIGHIVEARVLEAMG 100 (305)
T ss_dssp CHHHHHHHHHHCSSCEEEEECTTCHHHHHHHHHHT
T ss_pred CHHHHHHHHHhCCCCEEecccccchHHHHHHHHCC
Confidence 457889999999999998642 2266676666554
No 198
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=45.02 E-value=52 Score=28.34 Aligned_cols=84 Identities=11% Similarity=-0.041 Sum_probs=52.8
Q ss_pred cceeeccccccccCCChhhHHHHHHHHhcCCcE--EecCCC---CCCHHHHH-------hcCC--CceeEEEccccChHH
Q 025657 75 MPIMIAPTAFQKMAHPEGECATARAASAAGTIM--TLSSWA---TSSVEEVS-------STGP--GIRFFQLYVTKHRNV 140 (249)
Q Consensus 75 ~Pi~iaP~g~~~l~h~~gE~~~AraA~~~gi~~--~lss~s---s~sleeia-------~~~~--~~~wfQlY~~~d~~~ 140 (249)
.|.++.|+.-.+ ++.++=..+++---+.|+-- +.||.+ +.|.||-. +... -+.+...- ..+-+.
T Consensus 7 ~~a~vTPf~~dg-iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvi~Gvg-~~~t~~ 84 (291)
T 3a5f_A 7 GVAIITPFTNTG-VDFDKLSELIEWHIKSKTDAIIVCGTTGEATTMTETERKETIKFVIDKVNKRIPVIAGTG-SNNTAA 84 (291)
T ss_dssp EEECCCCBCSSS-BCHHHHHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECC-CSSHHH
T ss_pred eeeeEcCcCCCC-cCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCC-cccHHH
Confidence 355667775556 67766667777777777744 445432 44655432 2222 34555552 234566
Q ss_pred HHHHHHHHHHcCCcEEEEee
Q 025657 141 DAQLVKRAERAGFKAIALTV 160 (249)
Q Consensus 141 ~~~li~rA~~aG~~alvvTv 160 (249)
+.++.+.|+++|+.++++..
T Consensus 85 ai~la~~a~~~Gadavlv~~ 104 (291)
T 3a5f_A 85 SIAMSKWAESIGVDGLLVIT 104 (291)
T ss_dssp HHHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHHhcCCCEEEEcC
Confidence 77899999999999999884
No 199
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=44.97 E-value=74 Score=27.63 Aligned_cols=85 Identities=12% Similarity=0.033 Sum_probs=51.2
Q ss_pred cceeeccccccccCCChhhHHHHHHHHhcCCc--EEecCCC---CCCHHHHH-------hcCC--CceeEEEccccChHH
Q 025657 75 MPIMIAPTAFQKMAHPEGECATARAASAAGTI--MTLSSWA---TSSVEEVS-------STGP--GIRFFQLYVTKHRNV 140 (249)
Q Consensus 75 ~Pi~iaP~g~~~l~h~~gE~~~AraA~~~gi~--~~lss~s---s~sleeia-------~~~~--~~~wfQlY~~~d~~~ 140 (249)
.|.++.|+.-.+-++.++=..+.+---+.|+- ++.||.+ +.|.||-. +... -+.+...- ..+-+.
T Consensus 20 ~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gi~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg-~~~t~~ 98 (304)
T 3l21_A 20 LTAMVTPFSGDGSLDTATAARLANHLVDQGCDGLVVSGTTGESPTTTDGEKIELLRAVLEAVGDRARVIAGAG-TYDTAH 98 (304)
T ss_dssp EEECCCCBCTTSCBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECC-CSCHHH
T ss_pred EEEEECCCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEeCC-CCCHHH
Confidence 35556675434333444445677777777874 4455544 33555432 2222 24555552 235567
Q ss_pred HHHHHHHHHHcCCcEEEEee
Q 025657 141 DAQLVKRAERAGFKAIALTV 160 (249)
Q Consensus 141 ~~~li~rA~~aG~~alvvTv 160 (249)
+.++.++|+++|+.++++..
T Consensus 99 ai~la~~a~~~Gadavlv~~ 118 (304)
T 3l21_A 99 SIRLAKACAAEGAHGLLVVT 118 (304)
T ss_dssp HHHHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHHHHHcCCCEEEECC
Confidence 78999999999999999873
No 200
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=44.84 E-value=31 Score=29.80 Aligned_cols=36 Identities=14% Similarity=0.134 Sum_probs=24.8
Q ss_pred CCCHHHHHHHHHhCC-CCEEE--EccCCHHHHHHHhhCC
Q 025657 214 SLNWKDVKWLQTITS-LPILV--KGVLTAEDGSKLLSKE 249 (249)
Q Consensus 214 ~~tW~dl~wlr~~~~-lPivl--KGIl~~eDA~~A~~~~ 249 (249)
..+.+.-..|++.-+ .-++| =||.+++|+.+..++|
T Consensus 188 ~vdl~~t~~L~~~ip~~~~~VsESGI~t~~dv~~l~~~G 226 (258)
T 4a29_A 188 EINKENQRKLISMIPSNVVKVAKLGISERNEIEELRKLG 226 (258)
T ss_dssp CBCHHHHHHHHTTSCTTSEEEEEESSCCHHHHHHHHHTT
T ss_pred ccCHHHHHHHHhhCCCCCEEEEcCCCCCHHHHHHHHHCC
Confidence 345556666776643 33333 5999999999998876
No 201
>2qdd_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.30A {Roseovarius nubinhibens} PDB: 3fvd_B
Probab=44.76 E-value=84 Score=27.82 Aligned_cols=34 Identities=12% Similarity=0.136 Sum_probs=29.2
Q ss_pred CHHHHHHHHHhCCCCEEEEc-cCCHHHHHHHhhCC
Q 025657 216 NWKDVKWLQTITSLPILVKG-VLTAEDGSKLLSKE 249 (249)
Q Consensus 216 tW~dl~wlr~~~~lPivlKG-Il~~eDA~~A~~~~ 249 (249)
+|+.++.|++.++.||+.=+ +.+++|++.+++.|
T Consensus 225 d~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~ 259 (378)
T 2qdd_A 225 TLDQCAHVARRVANPIMLDECLHEFSDHLAAWSRG 259 (378)
T ss_dssp SHHHHHHHHTTCCSCEEECTTCCSHHHHHHHHHHT
T ss_pred CHHHHHHHHHhCCCCEEECCCcCCHHHHHHHHHhC
Confidence 89999999999999999876 45899999887643
No 202
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=44.70 E-value=17 Score=32.75 Aligned_cols=32 Identities=9% Similarity=0.068 Sum_probs=27.7
Q ss_pred HHHHHHHHhCCCCEEEEccCCHHHHHHHhhCC
Q 025657 218 KDVKWLQTITSLPILVKGVLTAEDGSKLLSKE 249 (249)
Q Consensus 218 ~dl~wlr~~~~lPivlKGIl~~eDA~~A~~~~ 249 (249)
+-++++|+.++.||+.=|=.++++|+.+++.|
T Consensus 269 ~~~~~ik~~~~iPvi~~Ggit~e~a~~~l~~g 300 (362)
T 4ab4_A 269 SIGPLIKEAFGGPYIVNERFDKASANAALASG 300 (362)
T ss_dssp CCHHHHHHHHCSCEEEESSCCHHHHHHHHHTT
T ss_pred HHHHHHHHHCCCCEEEeCCCCHHHHHHHHHcC
Confidence 35789999999999988766999999999875
No 203
>3cwo_X Beta/alpha-barrel protein based on 1THF and 1TMY; XRAY, CHEY, HISF, half barrel, de novo protein; 3.10A {Thermotoga maritima} PDB: 2lle_A
Probab=43.90 E-value=1.1e+02 Score=23.91 Aligned_cols=34 Identities=18% Similarity=0.317 Sum_probs=27.5
Q ss_pred CHHHHHHHHHhCCCCEEEE-ccCCHHHHHHHhhCC
Q 025657 216 NWKDVKWLQTITSLPILVK-GVLTAEDGSKLLSKE 249 (249)
Q Consensus 216 tW~dl~wlr~~~~lPivlK-GIl~~eDA~~A~~~~ 249 (249)
.|+-|..+++..+.|||.= |+-+++|..++.+.|
T Consensus 162 ~~~~i~~~~~~~~~Pvia~~g~~~~~~~~~~~~~G 196 (237)
T 3cwo_X 162 DTEMIRFVRPLTTLPIIASGGAGKMEHFLEAFLAG 196 (237)
T ss_dssp CHHHHHHHGGGCCSCEEEESCCCSHHHHHHHHHHT
T ss_pred cHHHHHHHHHhcCCCEEecCCCCCHHHHHHHHHcC
Confidence 4777888888889999875 677899999887755
No 204
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=43.84 E-value=79 Score=27.38 Aligned_cols=84 Identities=15% Similarity=0.073 Sum_probs=48.0
Q ss_pred ceeeccccccccCCChhhHHHHHHHHhcCCcE--EecCCC---CCCHHHH-------HhcCC--CceeEEEccccChHHH
Q 025657 76 PIMIAPTAFQKMAHPEGECATARAASAAGTIM--TLSSWA---TSSVEEV-------SSTGP--GIRFFQLYVTKHRNVD 141 (249)
Q Consensus 76 Pi~iaP~g~~~l~h~~gE~~~AraA~~~gi~~--~lss~s---s~sleei-------a~~~~--~~~wfQlY~~~d~~~~ 141 (249)
|.++.|+.-.+-++.++=..+++---+.|+-- +.||.+ +.|.||- .+... -+.+...- ..+-..+
T Consensus 17 ~a~vTPF~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg-~~~t~~a 95 (303)
T 2wkj_A 17 AALLTPFDQQQALDKASLRRLVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIVAEEAKGKIKLIAHVG-CVSTAES 95 (303)
T ss_dssp EECCCCBCTTSSBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECC-CSSHHHH
T ss_pred EeeEcCCCCCCCcCHHHHHHHHHHHHHcCCCEEEECeeccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecC-CCCHHHH
Confidence 44556654333334444446666666777743 455533 3455543 22222 34455552 1244667
Q ss_pred HHHHHHHHHcCCcEEEEee
Q 025657 142 AQLVKRAERAGFKAIALTV 160 (249)
Q Consensus 142 ~~li~rA~~aG~~alvvTv 160 (249)
.++.+.|+++|+.++++..
T Consensus 96 i~la~~A~~~Gadavlv~~ 114 (303)
T 2wkj_A 96 QQLAASAKRYGFDAVSAVT 114 (303)
T ss_dssp HHHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHHHhCCCCEEEecC
Confidence 7889999999999998874
No 205
>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A*
Probab=43.81 E-value=51 Score=28.81 Aligned_cols=69 Identities=14% Similarity=0.112 Sum_probs=46.7
Q ss_pred cccccCCChhhHHHHHHHHhcCCcEEecCCCCCCHHHHHhcCCCceeEEEccccChHHHHHHHHHHHHcCCcEE
Q 025657 83 AFQKMAHPEGECATARAASAAGTIMTLSSWATSSVEEVSSTGPGIRFFQLYVTKHRNVDAQLVKRAERAGFKAI 156 (249)
Q Consensus 83 g~~~l~h~~gE~~~AraA~~~gi~~~lss~ss~sleeia~~~~~~~wfQlY~~~d~~~~~~li~rA~~aG~~al 156 (249)
+++++.-.+|=..+.+.+.+.|+++...-+...+++.+++. ..|+|+=-..- .+.++++.+.+.|...+
T Consensus 70 sf~G~g~~~GL~~L~~~~~e~Glp~~Tev~d~~~v~~l~~~---vd~lqIgA~~~--~n~~LLr~va~~gkPVi 138 (285)
T 3sz8_A 70 SYRGVGLDEGLKIFAEVKARFGVPVITDVHEAEQAAPVAEI---ADVLQVPAFLA--RQTDLVVAIAKAGKPVN 138 (285)
T ss_dssp SCCCSCHHHHHHHHHHHHHHHCCCEEEECCSGGGHHHHHTT---CSEEEECGGGT--TCHHHHHHHHHTSSCEE
T ss_pred CcCCcCHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHHh---CCEEEECcccc--CCHHHHHHHHccCCcEE
Confidence 44554213454579999999999999888888888888765 35999832221 22357777777776544
No 206
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=43.61 E-value=65 Score=26.64 Aligned_cols=36 Identities=17% Similarity=0.144 Sum_probs=29.7
Q ss_pred CCCHHHHHHHHHhC-----CCCEEEEccCCHHHHHHHhhCC
Q 025657 214 SLNWKDVKWLQTIT-----SLPILVKGVLTAEDGSKLLSKE 249 (249)
Q Consensus 214 ~~tW~dl~wlr~~~-----~lPivlKGIl~~eDA~~A~~~~ 249 (249)
+...+.|+++|+.. +.||.+=|=.+.|.+..+.++|
T Consensus 154 ~~~~~~i~~lr~~~~~~~~~~~I~v~GGI~~~~~~~~~~aG 194 (230)
T 1tqj_A 154 PEVLPKIRALRQMCDERGLDPWIEVDGGLKPNNTWQVLEAG 194 (230)
T ss_dssp GGGHHHHHHHHHHHHHHTCCCEEEEESSCCTTTTHHHHHHT
T ss_pred HHHHHHHHHHHHHHHhcCCCCcEEEECCcCHHHHHHHHHcC
Confidence 45678899999988 7999988877779998888765
No 207
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=43.55 E-value=19 Score=32.54 Aligned_cols=32 Identities=16% Similarity=0.126 Sum_probs=27.9
Q ss_pred HHHHHHHHhCCCCEEEEccCCHHHHHHHhhCC
Q 025657 218 KDVKWLQTITSLPILVKGVLTAEDGSKLLSKE 249 (249)
Q Consensus 218 ~dl~wlr~~~~lPivlKGIl~~eDA~~A~~~~ 249 (249)
+-++.+|+.++.||+.=|=.++|+|+.+++.|
T Consensus 277 ~~~~~ik~~~~iPvi~~Ggit~e~a~~~l~~G 308 (361)
T 3gka_A 277 AIGQQLKAAFGGPFIVNENFTLDSAQAALDAG 308 (361)
T ss_dssp CCHHHHHHHHCSCEEEESSCCHHHHHHHHHTT
T ss_pred HHHHHHHHHcCCCEEEeCCCCHHHHHHHHHcC
Confidence 45789999999999988766999999999875
No 208
>4h1z_A Enolase Q92ZS5; dehydratase, magnesium binding site, enzyme function initiat isomerase; 2.01A {Sinorhizobium meliloti} PDB: 2ppg_A
Probab=43.55 E-value=32 Score=31.25 Aligned_cols=36 Identities=14% Similarity=0.088 Sum_probs=28.5
Q ss_pred CCCHHHHHHHHHhCCCCEEE-EccCCHHHHHHHhhCC
Q 025657 214 SLNWKDVKWLQTITSLPILV-KGVLTAEDGSKLLSKE 249 (249)
Q Consensus 214 ~~tW~dl~wlr~~~~lPivl-KGIl~~eDA~~A~~~~ 249 (249)
.-+++.+++|++.++.||.+ --+.+.+|++.+++.|
T Consensus 269 ~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~ 305 (412)
T 4h1z_A 269 TEDIDGLARVAASVSTAIAVGEEWRTVHDMVPRVARR 305 (412)
T ss_dssp TTCHHHHHHHHHHCSSEEEECTTCCSHHHHHHHHHTT
T ss_pred ccchHHHHHHHhhcCCccccCCcccchHhHHHHHHcC
Confidence 44688899999999999976 3467888988877654
No 209
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=43.30 E-value=43 Score=29.17 Aligned_cols=84 Identities=17% Similarity=0.088 Sum_probs=49.9
Q ss_pred cceeeccccccccCCChhhHHHHHHHHhcCCcE--EecCCC---CCCHHHHH-------hcCC--CceeEEEccccChHH
Q 025657 75 MPIMIAPTAFQKMAHPEGECATARAASAAGTIM--TLSSWA---TSSVEEVS-------STGP--GIRFFQLYVTKHRNV 140 (249)
Q Consensus 75 ~Pi~iaP~g~~~l~h~~gE~~~AraA~~~gi~~--~lss~s---s~sleeia-------~~~~--~~~wfQlY~~~d~~~ 140 (249)
.|.++.|+. .+-++.++=..+++---+.|+-- +.||.+ +.|.||=. +... -+.....- ..+-..
T Consensus 18 ~~a~vTPf~-dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg-~~st~~ 95 (306)
T 1o5k_A 18 GTAIVTPFK-NGELDLESYERLVRYQLENGVNALIVLGTTGESPTVNEDEREKLVSRTLEIVDGKIPVIVGAG-TNSTEK 95 (306)
T ss_dssp EEECCCCEE-TTEECHHHHHHHHHHHHHTTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECC-CSCHHH
T ss_pred eeeeecCcC-CCCcCHHHHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEcCC-CccHHH
Confidence 355566765 55445555556777666777743 445532 44555432 2212 34455552 224466
Q ss_pred HHHHHHHHHHcCCcEEEEee
Q 025657 141 DAQLVKRAERAGFKAIALTV 160 (249)
Q Consensus 141 ~~~li~rA~~aG~~alvvTv 160 (249)
+.++.+.|+++|+.++++..
T Consensus 96 ai~la~~A~~~Gadavlv~~ 115 (306)
T 1o5k_A 96 TLKLVKQAEKLGANGVLVVT 115 (306)
T ss_dssp HHHHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHHHHhcCCCEEEECC
Confidence 77889999999999998873
No 210
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=43.27 E-value=12 Score=36.17 Aligned_cols=36 Identities=14% Similarity=0.150 Sum_probs=30.6
Q ss_pred CCCHHHHHHHHHhCCCCEEEEc-cCCHHHHHHHhhCC
Q 025657 214 SLNWKDVKWLQTITSLPILVKG-VLTAEDGSKLLSKE 249 (249)
Q Consensus 214 ~~tW~dl~wlr~~~~lPivlKG-Il~~eDA~~A~~~~ 249 (249)
...|+.++++|+.++.||+.=| |.++|||+.+++.|
T Consensus 280 ~~~~~~~~~i~~~~~~pvi~~G~i~~~~~a~~~l~~g 316 (690)
T 3k30_A 280 GRQEEFVAGLKKLTTKPVVGVGRFTSPDAMVRQIKAG 316 (690)
T ss_dssp TTTHHHHTTSGGGCSSCEEECSCCCCHHHHHHHHHTT
T ss_pred cccHHHHHHHHHHcCCeEEEeCCCCCHHHHHHHHHCC
Confidence 3457888999999999999876 77899999999875
No 211
>2uva_G Fatty acid synthase beta subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; HET: FMN; 3.10A {Thermomyces lanuginosus} PDB: 2uvc_G*
Probab=43.08 E-value=47 Score=36.85 Aligned_cols=127 Identities=17% Similarity=0.104 Sum_probs=74.7
Q ss_pred cceeeccccccccCCChh---hHHHHHHHHhcCCcE--EecCCCCCCHHHHHh---cCCCceeEEEccccChHHHHHHHH
Q 025657 75 MPIMIAPTAFQKMAHPEG---ECATARAASAAGTIM--TLSSWATSSVEEVSS---TGPGIRFFQLYVTKHRNVDAQLVK 146 (249)
Q Consensus 75 ~Pi~iaP~g~~~l~h~~g---E~~~AraA~~~gi~~--~lss~ss~sleeia~---~~~~~~wfQlY~~~d~~~~~~li~ 146 (249)
.||.+.++-. +|+. ...+.+.+.+.|+++ +..+.+..+.|++.+ .. +...+-+ +. ......+.+.
T Consensus 638 ~p~gvN~~~~----~p~~~~~~~~~~~~~~~~gv~i~gv~~~~G~p~~e~~~~~l~~~-gi~~i~~-v~-~~~~a~~~v~ 710 (2060)
T 2uva_G 638 RGITVNLIYV----NPRAMGWQIPLLGRLRADGVPIEGLTIGAGVPSIEVANEYIQTL-GIRHISF-KP-GSVDAIQQVI 710 (2060)
T ss_dssp CCEEEEEETT----CTTHHHHHHHHHHHHHTTTCCEEEEEEESSCCCHHHHHHHHHHS-CCSEEEE-CC-CSHHHHHHHH
T ss_pred CCeEeccccc----CcccchhHHHHHHHHHHcCCCcceEeecCCCCCHHHHHHHHHHc-CCeEEEe-cC-CHHHHHHHHH
Confidence 4677666432 2432 236788888999999 777777777765543 22 3334322 22 3334445555
Q ss_pred HHHHcCCcEEE-EeecCCCCCCchhhhhccCCCCCccccccccccccCCCCCCCCchhhhHhhhhcCCCCCHHHHHHHHH
Q 025657 147 RAERAGFKAIA-LTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQT 225 (249)
Q Consensus 147 rA~~aG~~alv-vTvD~p~~g~Re~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tW~dl~wlr~ 225 (249)
+.+++|+.+|| +.+...-.|.- .++. ... ...-+-+..+++
T Consensus 711 ~l~~aG~D~iV~~q~~G~eaGGH-----~g~~------------------------d~~---------~~~l~lv~~i~~ 752 (2060)
T 2uva_G 711 NIAKANPTFPIILQWTGGRGGGH-----HSFE------------------------DFH---------QPILLMYSRIRK 752 (2060)
T ss_dssp HHHHHCTTSCEEEEECCTTSSSS-----CCSC------------------------CSH---------HHHHHHHHHHHT
T ss_pred HHHHcCCCEEEEeeeEcccCCCC-----CCcc------------------------ccc---------chHHHHHHHHHH
Confidence 56789999887 33332221110 0000 000 001256788999
Q ss_pred hCCCCEEEE-ccCCHHHHHHHh
Q 025657 226 ITSLPILVK-GVLTAEDGSKLL 246 (249)
Q Consensus 226 ~~~lPivlK-GIl~~eDA~~A~ 246 (249)
..+.|||+= ||.+++|+..|+
T Consensus 753 ~~~ipviaaGGI~~g~~i~aal 774 (2060)
T 2uva_G 753 CSNIVLVAGSGFGGSEDTYPYL 774 (2060)
T ss_dssp STTEEEEEESSCCSHHHHHHHH
T ss_pred HcCCCEEEeCCCCCHHHHHHHh
Confidence 999999886 599999999998
No 212
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=43.00 E-value=82 Score=27.14 Aligned_cols=84 Identities=20% Similarity=0.058 Sum_probs=49.0
Q ss_pred ceeeccccccccCCChhhHHHHHHHHhcCCc--EEecCCC---CCCHHHHH-------hcCC--CceeEEEccccChHHH
Q 025657 76 PIMIAPTAFQKMAHPEGECATARAASAAGTI--MTLSSWA---TSSVEEVS-------STGP--GIRFFQLYVTKHRNVD 141 (249)
Q Consensus 76 Pi~iaP~g~~~l~h~~gE~~~AraA~~~gi~--~~lss~s---s~sleeia-------~~~~--~~~wfQlY~~~d~~~~ 141 (249)
|.++.|+.-.+-++.++=..+++---+.|+- ++.||.+ +.|.||-. +... -+.+...- ..+-+.+
T Consensus 13 ~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg-~~~t~~a 91 (297)
T 3flu_A 13 VALITPMNQDGSIHYEQLRDLIDWHIENGTDGIVAVGTTGESATLSVEEHTAVIEAVVKHVAKRVPVIAGTG-ANNTVEA 91 (297)
T ss_dssp EECCCCBCTTSCBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECC-CSSHHHH
T ss_pred EeeeccCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEeCC-CcCHHHH
Confidence 4455665433333444444666666677875 3445544 33555432 2222 34555552 2355677
Q ss_pred HHHHHHHHHcCCcEEEEee
Q 025657 142 AQLVKRAERAGFKAIALTV 160 (249)
Q Consensus 142 ~~li~rA~~aG~~alvvTv 160 (249)
.++.++|+++|+.++++..
T Consensus 92 i~la~~a~~~Gadavlv~~ 110 (297)
T 3flu_A 92 IALSQAAEKAGADYTLSVV 110 (297)
T ss_dssp HHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHHcCCCEEEECC
Confidence 7899999999999998874
No 213
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=42.84 E-value=1.1e+02 Score=26.29 Aligned_cols=84 Identities=17% Similarity=0.101 Sum_probs=49.9
Q ss_pred ceeeccccccccCCChhhHHHHHHHHhcCCcE--EecCCC---CCCHHHH-------HhcCC--CceeEEEccccChHHH
Q 025657 76 PIMIAPTAFQKMAHPEGECATARAASAAGTIM--TLSSWA---TSSVEEV-------SSTGP--GIRFFQLYVTKHRNVD 141 (249)
Q Consensus 76 Pi~iaP~g~~~l~h~~gE~~~AraA~~~gi~~--~lss~s---s~sleei-------a~~~~--~~~wfQlY~~~d~~~~ 141 (249)
|.++.|+.-.+-++.++=..+++-.-+.|+-- +.||.+ +.|.||- .+... -+.+...-- .+-+.+
T Consensus 9 ~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~-~~t~~a 87 (294)
T 3b4u_A 9 AALTTPFKTDGTVDIDAMIAHARRCLSNGCDSVTLFGTTGEGCSVGSRERQAILSSFIAAGIAPSRIVTGVLV-DSIEDA 87 (294)
T ss_dssp EECCCCBCTTSSBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHTTCCGGGEEEEECC-SSHHHH
T ss_pred EEEECCCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCC-ccHHHH
Confidence 44556654333334444446666666778743 455543 3455543 22223 245566532 345667
Q ss_pred HHHHHHHHHcCCcEEEEee
Q 025657 142 AQLVKRAERAGFKAIALTV 160 (249)
Q Consensus 142 ~~li~rA~~aG~~alvvTv 160 (249)
.++.+.|+++|+.++++..
T Consensus 88 i~la~~A~~~Gadavlv~~ 106 (294)
T 3b4u_A 88 ADQSAEALNAGARNILLAP 106 (294)
T ss_dssp HHHHHHHHHTTCSEEEECC
T ss_pred HHHHHHHHhcCCCEEEEcC
Confidence 7999999999999998873
No 214
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=42.71 E-value=14 Score=30.59 Aligned_cols=33 Identities=15% Similarity=0.062 Sum_probs=27.9
Q ss_pred HHHHHHHHHhCCCCEEEEccCCH-------HHHHHHhhCC
Q 025657 217 WKDVKWLQTITSLPILVKGVLTA-------EDGSKLLSKE 249 (249)
Q Consensus 217 W~dl~wlr~~~~lPivlKGIl~~-------eDA~~A~~~~ 249 (249)
.+.++.+|+.++.||++.+..++ ++++.|.++|
T Consensus 69 ~~~i~~i~~~~~~pv~~~~~~~~~~~~~~~~~~~~~~~~G 108 (248)
T 1geq_A 69 FWIVKEFRRHSSTPIVLMTYYNPIYRAGVRNFLAEAKASG 108 (248)
T ss_dssp HHHHHHHHTTCCCCEEEEECHHHHHHHCHHHHHHHHHHHT
T ss_pred HHHHHHHHhhCCCCEEEEeccchhhhcCHHHHHHHHHHCC
Confidence 57899999999999999886676 7888888776
No 215
>2zad_A Muconate cycloisomerase; muconate lactonizing enzyme (MLE), TM0006, struct genomics, NPPSFA; HET: 1PE; 1.60A {Thermotoga maritima} PDB: 3deq_A 3der_A* 3des_A* 3dfy_A
Probab=42.51 E-value=33 Score=30.12 Aligned_cols=36 Identities=17% Similarity=0.269 Sum_probs=29.6
Q ss_pred CCCHHHHHHHHHhCCCCEEEEc-cCCHHHHHHHhhCC
Q 025657 214 SLNWKDVKWLQTITSLPILVKG-VLTAEDGSKLLSKE 249 (249)
Q Consensus 214 ~~tW~dl~wlr~~~~lPivlKG-Il~~eDA~~A~~~~ 249 (249)
.-+|+.++.|++.++.||+.=+ +.+++|++.+++.|
T Consensus 221 ~~~~~~~~~l~~~~~ipia~dE~~~~~~~~~~~i~~~ 257 (345)
T 2zad_A 221 REDIEGLKFVRFHSPFPVAADESARTKFDVMRLVKEE 257 (345)
T ss_dssp TTCHHHHHHHHHHSSSCEEESTTCCSHHHHHHHHHHT
T ss_pred cccHHHHHHHHHhCCCCEEEeCCcCCHHHHHHHHHhC
Confidence 4578999999999999999865 45899999887643
No 216
>3can_A Pyruvate-formate lyase-activating enzyme; structural genomics, pyruvate-formate lyase-activating enzym MCSG, APC20359.1; 1.80A {Bacteroides vulgatus atcc 8482}
Probab=42.42 E-value=1.2e+02 Score=23.44 Aligned_cols=81 Identities=11% Similarity=0.070 Sum_probs=49.9
Q ss_pred cccccCCChhhHHHHHHHHhcCCcEEecCCCCCCHHHHHhcCCCceeEEEcccc-Ch-----------HHHHHHHHHHHH
Q 025657 83 AFQKMAHPEGECATARAASAAGTIMTLSSWATSSVEEVSSTGPGIRFFQLYVTK-HR-----------NVDAQLVKRAER 150 (249)
Q Consensus 83 g~~~l~h~~gE~~~AraA~~~gi~~~lss~ss~sleeia~~~~~~~wfQlY~~~-d~-----------~~~~~li~rA~~ 150 (249)
|+--+.|++--..+.+.+++.|+.+.+.|.++.+-+.+.+..+...++++-+.. |. +.+.+-|+++.+
T Consensus 11 GGEPll~~~~~~~l~~~~~~~g~~~~l~TNG~l~~~~~~~l~~~~d~v~isld~~~~~~~~~~~g~~~~~i~~~i~~l~~ 90 (182)
T 3can_A 11 GGEPLLHPEFLIDILKRCGQQGIHRAVDTTLLARKETVDEVMRNCELLLIDLKSMDSTVHQTFCDVPNELILKNIRRVAE 90 (182)
T ss_dssp SSTGGGSHHHHHHHHHHHHHTTCCEEEECTTCCCHHHHHHHHHTCSEEEEECCCSCHHHHHHHHSSCSHHHHHHHHHHHH
T ss_pred cccccCCHHHHHHHHHHHHHCCCcEEEECCCCCCHHHHHHHHhhCCEEEEECCCCCHHHHHHHhCCCHHHHHHHHHHHHh
Confidence 444466775434788888889999999999887644333221212345554433 22 345566677778
Q ss_pred cCCcEEEEeecCC
Q 025657 151 AGFKAIALTVDTP 163 (249)
Q Consensus 151 aG~~alvvTvD~p 163 (249)
.|.+..+-++=.+
T Consensus 91 ~g~~v~i~~~v~~ 103 (182)
T 3can_A 91 ADFPYYIRIPLIE 103 (182)
T ss_dssp TTCCEEEEEEECB
T ss_pred CCCeEEEEEEEEC
Confidence 8887766555444
No 217
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=42.32 E-value=18 Score=30.96 Aligned_cols=35 Identities=20% Similarity=0.082 Sum_probs=31.0
Q ss_pred CCCHHHHHHHHHhC----CCCEEEE-ccCCHHHHHHHhhC
Q 025657 214 SLNWKDVKWLQTIT----SLPILVK-GVLTAEDGSKLLSK 248 (249)
Q Consensus 214 ~~tW~dl~wlr~~~----~lPivlK-GIl~~eDA~~A~~~ 248 (249)
..+|+-++.|++.. +.||+.= ||-++||++++.+.
T Consensus 187 G~d~eli~~l~~~~~~~~~iPVIasGGi~s~ed~~~l~~~ 226 (260)
T 2agk_A 187 GIDELLVSKLFEWTKDYDDLKIVYAGGAKSVDDLKLVDEL 226 (260)
T ss_dssp CCCHHHHHHHHHHHTTCSSCEEEEESCCCCTHHHHHHHHH
T ss_pred CCCHHHHHHHHHhhcccCCceEEEeCCCCCHHHHHHHHHh
Confidence 34999999999999 9999996 59999999998875
No 218
>1vr4_A Hypothetical protein APC22750; structural genomics, pentamer, PSI, PR structure initiative, the midwest center for structural GEN MCSG; 2.09A {Bacillus cereus} SCOP: d.230.5.1 PDB: 2gtc_A
Probab=41.67 E-value=21 Score=26.46 Aligned_cols=27 Identities=22% Similarity=0.215 Sum_probs=21.4
Q ss_pred hHHHHHHHHHHHHcCCcEEE-EeecCCC
Q 025657 138 RNVDAQLVKRAERAGFKAIA-LTVDTPR 164 (249)
Q Consensus 138 ~~~~~~li~rA~~aG~~alv-vTvD~p~ 164 (249)
++...+|.++|++.|++||+ +.+|...
T Consensus 59 ~~A~~rm~~~A~~lGAnAVVgvr~d~~~ 86 (103)
T 1vr4_A 59 DIAMDEMKELAKQKGANAIVGVDVDYEV 86 (103)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHcCCCEEEEEEEEeee
Confidence 45667899999999999987 6666644
No 219
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=41.46 E-value=29 Score=29.79 Aligned_cols=34 Identities=18% Similarity=0.142 Sum_probs=28.0
Q ss_pred CHHHHHHHHHhCCCCEEEE-ccCCHHHHHHHhhCC
Q 025657 216 NWKDVKWLQTITSLPILVK-GVLTAEDGSKLLSKE 249 (249)
Q Consensus 216 tW~dl~wlr~~~~lPivlK-GIl~~eDA~~A~~~~ 249 (249)
+.+.|+.+++.++.|++++ ++.+.++++.+.++|
T Consensus 66 ~~~~i~~i~~~~~~Pvi~~~~~~~~~~~~~~~~aG 100 (297)
T 2zbt_A 66 DPKIIKEIMAAVSIPVMAKVRIGHFVEAMILEAIG 100 (297)
T ss_dssp CHHHHHHHHTTCSSCEEEEEETTCHHHHHHHHHTT
T ss_pred CHHHHHHHHHhcCCCeEEEeccCCHHHHHHHHHCC
Confidence 3467899999999999987 466789999988876
No 220
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=41.41 E-value=94 Score=25.77 Aligned_cols=34 Identities=29% Similarity=0.319 Sum_probs=27.9
Q ss_pred CHHHHHHHHHhC-CCCEEEEccCCHHHHHHHhhCC
Q 025657 216 NWKDVKWLQTIT-SLPILVKGVLTAEDGSKLLSKE 249 (249)
Q Consensus 216 tW~dl~wlr~~~-~lPivlKGIl~~eDA~~A~~~~ 249 (249)
+.+.|+++|+.. +.||.|=|=.+++.+..++++|
T Consensus 156 ~l~ki~~lr~~~~~~~I~VdGGI~~~t~~~~~~aG 190 (228)
T 3ovp_A 156 MMPKVHWLRTQFPSLDIEVDGGVGPDTVHKCAEAG 190 (228)
T ss_dssp GHHHHHHHHHHCTTCEEEEESSCSTTTHHHHHHHT
T ss_pred HHHHHHHHHHhcCCCCEEEeCCcCHHHHHHHHHcC
Confidence 456688899876 5789888877999999999877
No 221
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=41.35 E-value=56 Score=29.07 Aligned_cols=26 Identities=15% Similarity=0.031 Sum_probs=21.1
Q ss_pred HHhCCCCEEE-EccCCHHHHHHHhhCC
Q 025657 224 QTITSLPILV-KGVLTAEDGSKLLSKE 249 (249)
Q Consensus 224 r~~~~lPivl-KGIl~~eDA~~A~~~~ 249 (249)
.+..+.|||. =||.++.|+.+|+..|
T Consensus 219 ~~~~~ipvIa~GGI~~g~di~kAlalG 245 (351)
T 2c6q_A 219 AHGLKGHIISDGGCSCPGDVAKAFGAG 245 (351)
T ss_dssp HHHTTCEEEEESCCCSHHHHHHHHHTT
T ss_pred HhhcCCcEEEeCCCCCHHHHHHHHHcC
Confidence 4445788876 4899999999999876
No 222
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=41.17 E-value=28 Score=30.18 Aligned_cols=28 Identities=18% Similarity=0.170 Sum_probs=23.4
Q ss_pred cChHHHHHHHHHHHHcCCcEEEEeecCCC
Q 025657 136 KHRNVDAQLVKRAERAGFKAIALTVDTPR 164 (249)
Q Consensus 136 ~d~~~~~~li~rA~~aG~~alvvTvD~p~ 164 (249)
.|.+...++++++.++|+..|.|- |+-.
T Consensus 156 ~~~~~~~~~~~~~~~~G~d~i~l~-DT~G 183 (302)
T 2ftp_A 156 VDPRQVAWVARELQQMGCYEVSLG-DTIG 183 (302)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEE-ESSS
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEe-CCCC
Confidence 477888899999999999998888 8744
No 223
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=41.17 E-value=90 Score=26.98 Aligned_cols=84 Identities=17% Similarity=0.104 Sum_probs=47.0
Q ss_pred ceeeccccccccCCChhhHHHHHHHHhcCCcE--EecCCC---CCCHHHHH-------hc-CC-CceeEEEccccChHHH
Q 025657 76 PIMIAPTAFQKMAHPEGECATARAASAAGTIM--TLSSWA---TSSVEEVS-------ST-GP-GIRFFQLYVTKHRNVD 141 (249)
Q Consensus 76 Pi~iaP~g~~~l~h~~gE~~~AraA~~~gi~~--~lss~s---s~sleeia-------~~-~~-~~~wfQlY~~~d~~~~ 141 (249)
|-++.|+.-.+-++.++=..+++---+.|+-- ++||.+ +.|.||=. +. .+ -+.....- ..+-..+
T Consensus 18 ~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg-~~~t~~a 96 (301)
T 1xky_A 18 TAMVTPFDINGNIDFAKTTKLVNYLIDNGTTAIVVGGTTGESPTLTSEEKVALYRHVVSVVDKRVPVIAGTG-SNNTHAS 96 (301)
T ss_dssp EECCCCBCTTSSBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECC-CSCHHHH
T ss_pred EeeECcCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCceEEeCCC-CCCHHHH
Confidence 44455653333334444446666666677743 445533 34555432 22 22 34455552 2244667
Q ss_pred HHHHHHHHHcCCcEEEEee
Q 025657 142 AQLVKRAERAGFKAIALTV 160 (249)
Q Consensus 142 ~~li~rA~~aG~~alvvTv 160 (249)
.++.+.|+++|+.++++..
T Consensus 97 i~la~~A~~~Gadavlv~~ 115 (301)
T 1xky_A 97 IDLTKKATEVGVDAVMLVA 115 (301)
T ss_dssp HHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHhcCCCEEEEcC
Confidence 7888999999999988874
No 224
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=41.05 E-value=23 Score=30.61 Aligned_cols=33 Identities=15% Similarity=0.158 Sum_probs=27.6
Q ss_pred HHHHHHHHHhCCCCEEEE-ccCCHHHHHHHhhCC
Q 025657 217 WKDVKWLQTITSLPILVK-GVLTAEDGSKLLSKE 249 (249)
Q Consensus 217 W~dl~wlr~~~~lPivlK-GIl~~eDA~~A~~~~ 249 (249)
.+.++.+|+.++.|+++= ||-++|+|+++++.|
T Consensus 195 ~~~v~~vr~~~~~pv~vGfGI~~~e~~~~~~~~g 228 (267)
T 3vnd_A 195 ENILTQLAEFNAPPPLLGFGIAEPEQVRAAIKAG 228 (267)
T ss_dssp HHHHHHHHTTTCCCEEECSSCCSHHHHHHHHHTT
T ss_pred HHHHHHHHHhcCCCEEEECCcCCHHHHHHHHHcC
Confidence 467899999999999985 677899999777654
No 225
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=40.76 E-value=82 Score=27.33 Aligned_cols=83 Identities=8% Similarity=-0.018 Sum_probs=44.5
Q ss_pred ceeeccccccccCCChhhHHHHHHHHhcCCc--EEecCCC---CCCHHHH-------HhcCCC--ceeEEEccccChHHH
Q 025657 76 PIMIAPTAFQKMAHPEGECATARAASAAGTI--MTLSSWA---TSSVEEV-------SSTGPG--IRFFQLYVTKHRNVD 141 (249)
Q Consensus 76 Pi~iaP~g~~~l~h~~gE~~~AraA~~~gi~--~~lss~s---s~sleei-------a~~~~~--~~wfQlY~~~d~~~~ 141 (249)
|-++.|+.-.+-++.++=..+++---+.|+- ++.||.+ +.|.||- .+...+ +.+...- ..+-..+
T Consensus 20 ~alvTPf~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg-~~~t~~a 98 (307)
T 3s5o_A 20 PPVTTPFTATAEVDYGKLEENLHKLGTFPFRGFVVQGSNGEFPFLTSSERLEVVSRVRQAMPKNRLLLAGSG-CESTQAT 98 (307)
T ss_dssp CBCCCCBCTTSCBCHHHHHHHHHHHTTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHTSCTTSEEEEECC-CSSHHHH
T ss_pred EeeEccCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHcCCCCcEEEecC-CCCHHHH
Confidence 4445565433323333334566666667774 3444433 3455543 222222 2344432 2355567
Q ss_pred HHHHHHHHHcCCcEEEEe
Q 025657 142 AQLVKRAERAGFKAIALT 159 (249)
Q Consensus 142 ~~li~rA~~aG~~alvvT 159 (249)
.++.++|+++|+.++++.
T Consensus 99 i~la~~A~~~Gadavlv~ 116 (307)
T 3s5o_A 99 VEMTVSMAQVGADAAMVV 116 (307)
T ss_dssp HHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHHHcCCCEEEEc
Confidence 788889999999998886
No 226
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=40.70 E-value=79 Score=27.13 Aligned_cols=84 Identities=15% Similarity=0.028 Sum_probs=47.6
Q ss_pred ceeeccccccccCCChhhHHHHHHHHhcCCc--EEecCCC---CCCHHHHH-------hcCC--CceeEEEccccChHHH
Q 025657 76 PIMIAPTAFQKMAHPEGECATARAASAAGTI--MTLSSWA---TSSVEEVS-------STGP--GIRFFQLYVTKHRNVD 141 (249)
Q Consensus 76 Pi~iaP~g~~~l~h~~gE~~~AraA~~~gi~--~~lss~s---s~sleeia-------~~~~--~~~wfQlY~~~d~~~~ 141 (249)
|-++.|+.-.+-++.++=..+.+---+.|+- ++.||.+ +.|.||-. +... -+.+...- ..+-..+
T Consensus 7 ~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg-~~~t~~a 85 (291)
T 3tak_A 7 VAIVTPMLKDGGVDWKSLEKLVEWHIEQGTNSIVAVGTTGEASTLSMEEHTQVIKEIIRVANKRIPIIAGTG-ANSTREA 85 (291)
T ss_dssp EECCCCBCTTSCBCHHHHHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECC-CSSHHHH
T ss_pred eeeECCCCCCCCcCHHHHHHHHHHHHHCCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCeEEEeCC-CCCHHHH
Confidence 4455665433333444444666666666764 4445544 33555432 2222 24455542 2355667
Q ss_pred HHHHHHHHHcCCcEEEEee
Q 025657 142 AQLVKRAERAGFKAIALTV 160 (249)
Q Consensus 142 ~~li~rA~~aG~~alvvTv 160 (249)
.++.++|+++|+.++++..
T Consensus 86 i~la~~a~~~Gadavlv~~ 104 (291)
T 3tak_A 86 IELTKAAKDLGADAALLVT 104 (291)
T ss_dssp HHHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHHHhcCCCEEEEcC
Confidence 7888999999999998873
No 227
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=40.65 E-value=50 Score=29.77 Aligned_cols=32 Identities=22% Similarity=0.141 Sum_probs=23.1
Q ss_pred HHHHHHHHhC-CCCEEEE-ccCCHHHHHHHhhCC
Q 025657 218 KDVKWLQTIT-SLPILVK-GVLTAEDGSKLLSKE 249 (249)
Q Consensus 218 ~dl~wlr~~~-~lPivlK-GIl~~eDA~~A~~~~ 249 (249)
+-|..++..- +.||+.= ||.+++|+.+|+..|
T Consensus 267 ~~L~~v~~~~~~ipvia~GGI~~g~Dv~KaLalG 300 (365)
T 3sr7_A 267 QVLLNAQPLMDKVEILASGGIRHPLDIIKALVLG 300 (365)
T ss_dssp HHHHHHGGGTTTSEEEECSSCCSHHHHHHHHHHT
T ss_pred HHHHHHHHhcCCCeEEEeCCCCCHHHHHHHHHcC
Confidence 3444444332 5788887 699999999998766
No 228
>1viz_A PCRB protein homolog; structural genomics, unknown function; 1.85A {Bacillus subtilis} SCOP: c.1.4.1
Probab=40.46 E-value=30 Score=29.39 Aligned_cols=33 Identities=15% Similarity=0.198 Sum_probs=29.0
Q ss_pred CCHHHHHHHHHhC-CCCEEEE-ccCCHHHHHHHhh
Q 025657 215 LNWKDVKWLQTIT-SLPILVK-GVLTAEDGSKLLS 247 (249)
Q Consensus 215 ~tW~dl~wlr~~~-~lPivlK-GIl~~eDA~~A~~ 247 (249)
-..+-++.+++.+ +.|+++= ||-++|+|+.+.+
T Consensus 168 ~~~~~i~~i~~~~~~~Pv~vGgGI~t~e~a~~~~~ 202 (240)
T 1viz_A 168 GDIEAVKKTKAVLETSTLFYGGGIKDAETAKQYAE 202 (240)
T ss_dssp CCHHHHHHHHHTCSSSEEEEESSCCSHHHHHHHHT
T ss_pred ChHHHHHHHHHhcCCCCEEEEeccCCHHHHHHHHh
Confidence 3577899999999 9999996 5999999999876
No 229
>3w01_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; HET: PGE; 1.54A {Staphylococcus aureus} PDB: 3w02_A
Probab=40.46 E-value=28 Score=29.61 Aligned_cols=32 Identities=6% Similarity=0.198 Sum_probs=28.6
Q ss_pred CHHHHHHHHHhC-CCCEEEE-ccCCHHHHHHHhh
Q 025657 216 NWKDVKWLQTIT-SLPILVK-GVLTAEDGSKLLS 247 (249)
Q Consensus 216 tW~dl~wlr~~~-~lPivlK-GIl~~eDA~~A~~ 247 (249)
+.+-++.+|+.+ +.|+++= ||.++|+|+.+.+
T Consensus 173 ~~~~v~~ir~~~~~~pv~vGfGI~~~e~a~~~~~ 206 (235)
T 3w01_A 173 DVSKVQAVSEHLTETQLFYGGGISSEQQATEMAA 206 (235)
T ss_dssp CHHHHHHHHTTCSSSEEEEESCCCSHHHHHHHHT
T ss_pred CHHHHHHHHHhcCCCCEEEECCcCCHHHHHHHHc
Confidence 678899999999 8999985 7999999998876
No 230
>3l12_A Putative glycerophosphoryl diester phosphodiester; struct genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.60A {Silicibacter pomeroyi}
Probab=40.10 E-value=25 Score=30.56 Aligned_cols=69 Identities=19% Similarity=0.196 Sum_probs=43.9
Q ss_pred HHHHHHHhcCC--cEEecCCCCCCHHHHHhcCCCceeEEEccc-------------------------------------
Q 025657 95 ATARAASAAGT--IMTLSSWATSSVEEVSSTGPGIRFFQLYVT------------------------------------- 135 (249)
Q Consensus 95 ~~AraA~~~gi--~~~lss~ss~sleeia~~~~~~~wfQlY~~------------------------------------- 135 (249)
.+.+.-.+.|. ..+++|+....++.+.+..|...-.+|+-.
T Consensus 169 ~v~~~l~~~~~~~~v~i~SF~~~~l~~~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 248 (313)
T 3l12_A 169 AVLADVRRYRMEPRTVMHSFDWALLGECRRQAPDLPTSYLSQLPENADDPGEDSAKPVGPDYDRMTESLPQAVASAGGQL 248 (313)
T ss_dssp HHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCTTSCEEEEECCCC-------------CCCTTTCCSCHHHHHHHHTCSE
T ss_pred HHHHHHHHcCCCCCEEEEcCCHHHHHHHHHHCCCCcEEEEeccccccccccccccccccccchhccccHHHHHHHhCCcE
Confidence 55555666554 467777777777777765553322222211
Q ss_pred ---cChHHHHHHHHHHHHcCCcEEEEeecCC
Q 025657 136 ---KHRNVDAQLVKRAERAGFKAIALTVDTP 163 (249)
Q Consensus 136 ---~d~~~~~~li~rA~~aG~~alvvTvD~p 163 (249)
.-...+.+++++|+++|.+..+.|||.+
T Consensus 249 ~~~~~~~~~~~~v~~~~~~Gl~V~~WTVn~~ 279 (313)
T 3l12_A 249 WCPYFLDVTPELVAEAHDLGLIVLTWTVNEP 279 (313)
T ss_dssp EEEBGGGCCHHHHHHHHHTTCEEEEBCCCSH
T ss_pred EecchhcCCHHHHHHHHHCCCEEEEEcCCCH
Confidence 1123346889999999999999999864
No 231
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=40.09 E-value=33 Score=29.40 Aligned_cols=62 Identities=19% Similarity=0.171 Sum_probs=45.7
Q ss_pred ChhhHHHHHHHHhcCCcEEecCCCCCCHHHHHhcCCCceeEEEccccChHHH-HHHHHHHHHcCCcEEE
Q 025657 90 PEGECATARAASAAGTIMTLSSWATSSVEEVSSTGPGIRFFQLYVTKHRNVD-AQLVKRAERAGFKAIA 157 (249)
Q Consensus 90 ~~gE~~~AraA~~~gi~~~lss~ss~sleeia~~~~~~~wfQlY~~~d~~~~-~~li~rA~~aG~~alv 157 (249)
.+|-..+.+.+++.|+|++.+-+...+++.+++.. .|+|+ .-++.. ..|++.+.+.|...++
T Consensus 73 ~egl~~l~~~~~~~Gl~~~te~~d~~~~~~l~~~v---d~~kI---ga~~~~n~~ll~~~a~~~kPV~l 135 (262)
T 1zco_A 73 EKALRWMREAADEYGLVTVTEVMDTRHVELVAKYS---DILQI---GARNSQNFELLKEVGKVENPVLL 135 (262)
T ss_dssp HHHHHHHHHHHHHHTCEEEEECCCGGGHHHHHHHC---SEEEE---CGGGTTCHHHHHHHTTSSSCEEE
T ss_pred HHHHHHHHHHHHHcCCcEEEeeCCHHhHHHHHhhC---CEEEE---CcccccCHHHHHHHHhcCCcEEE
Confidence 55666899999999999999988888888888762 59998 334332 3567776666765554
No 232
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=39.73 E-value=1.1e+02 Score=27.04 Aligned_cols=85 Identities=16% Similarity=0.092 Sum_probs=50.2
Q ss_pred cceeeccccccccCCChhhHHHHHHHHhcCC--cEEecCCC---CCCHHHHH-------hcCC--CceeEEEccccChHH
Q 025657 75 MPIMIAPTAFQKMAHPEGECATARAASAAGT--IMTLSSWA---TSSVEEVS-------STGP--GIRFFQLYVTKHRNV 140 (249)
Q Consensus 75 ~Pi~iaP~g~~~l~h~~gE~~~AraA~~~gi--~~~lss~s---s~sleeia-------~~~~--~~~wfQlY~~~d~~~ 140 (249)
.|.++.|+.-.+-++.++=..+++-.-+.|+ .+++||.+ +.|.||-. +... -+.....-- .+-..
T Consensus 36 ~~alvTPF~~dg~ID~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~-~st~e 114 (343)
T 2v9d_A 36 IPPVSTIFTADGQLDKPGTAALIDDLIKAGVDGLFFLGSGGEFSQLGAEERKAIARFAIDHVDRRVPVLIGTGG-TNARE 114 (343)
T ss_dssp CCEECCCBCTTSSBCHHHHHHHHHHHHHTTCSCEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCS-SCHHH
T ss_pred EEeeECCCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCC-CCHHH
Confidence 4556667543333344444466666666776 34556544 34555432 2222 345555532 34566
Q ss_pred HHHHHHHHHHcCCcEEEEee
Q 025657 141 DAQLVKRAERAGFKAIALTV 160 (249)
Q Consensus 141 ~~~li~rA~~aG~~alvvTv 160 (249)
+.++.+.|+++|+.++++..
T Consensus 115 ai~la~~A~~~Gadavlv~~ 134 (343)
T 2v9d_A 115 TIELSQHAQQAGADGIVVIN 134 (343)
T ss_dssp HHHHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHHHHhcCCCEEEECC
Confidence 77899999999999998874
No 233
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=39.65 E-value=1.5e+02 Score=25.67 Aligned_cols=84 Identities=17% Similarity=-0.030 Sum_probs=51.1
Q ss_pred ceeeccccccccCCChhhHHHHHHHHhcCCc--EEecCCC---CCCHHHH-------HhcCC--CceeEEEccccChHHH
Q 025657 76 PIMIAPTAFQKMAHPEGECATARAASAAGTI--MTLSSWA---TSSVEEV-------SSTGP--GIRFFQLYVTKHRNVD 141 (249)
Q Consensus 76 Pi~iaP~g~~~l~h~~gE~~~AraA~~~gi~--~~lss~s---s~sleei-------a~~~~--~~~wfQlY~~~d~~~~ 141 (249)
|.++.|+.-.+-++.++=..+.+-.-+.|+- ++.||.+ +.|.||- .+... -+.+...- ..+-..+
T Consensus 13 ~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpViaGvg-~~~t~~a 91 (311)
T 3h5d_A 13 TAFITPFHEDGSINFDAIPALIEHLLAHHTDGILLAGTTAESPTLTHDEELELFAAVQKVVNGRVPLIAGVG-TNDTRDS 91 (311)
T ss_dssp EECCCCBCTTSSBCTTHHHHHHHHHHHTTCCCEEESSTTTTGGGSCHHHHHHHHHHHHHHSCSSSCEEEECC-CSSHHHH
T ss_pred EeeecCCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCC-CcCHHHH
Confidence 5566676544444555555777777777774 4455544 3455543 22222 34555552 2355667
Q ss_pred HHHHHHHHHcCC-cEEEEee
Q 025657 142 AQLVKRAERAGF-KAIALTV 160 (249)
Q Consensus 142 ~~li~rA~~aG~-~alvvTv 160 (249)
.++.++|+++|+ .++++..
T Consensus 92 i~la~~A~~~Ga~davlv~~ 111 (311)
T 3h5d_A 92 IEFVKEVAEFGGFAAGLAIV 111 (311)
T ss_dssp HHHHHHHHHSCCCSEEEEEC
T ss_pred HHHHHHHHhcCCCcEEEEcC
Confidence 788999999996 9988874
No 234
>3qvq_A Phosphodiesterase OLEI02445; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase, hydrolase; HET: MSE G3P; 1.60A {Oleispira antarctica}
Probab=39.62 E-value=23 Score=29.66 Aligned_cols=69 Identities=17% Similarity=0.151 Sum_probs=42.1
Q ss_pred HHHHHHhcCC---cEEecCCCCCCHHHHHhcCCCceeEEEcc-------------------ccChHHHHHHHHHHHHcCC
Q 025657 96 TARAASAAGT---IMTLSSWATSSVEEVSSTGPGIRFFQLYV-------------------TKHRNVDAQLVKRAERAGF 153 (249)
Q Consensus 96 ~AraA~~~gi---~~~lss~ss~sleeia~~~~~~~wfQlY~-------------------~~d~~~~~~li~rA~~aG~ 153 (249)
+++..++.+. ..++||+....++.+.+..|...-..|+. ......+.+++++++++|.
T Consensus 132 v~~~l~~~~~~~~~vii~SF~~~~l~~~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~v~~~~~~G~ 211 (252)
T 3qvq_A 132 SVEVLKQHWPQDLPLLFSSFNYFALVSAKALWPEIARGYNVSAIPSAWQERLEHLDCAGLHIHQSFFDVQQVSDIKAAGY 211 (252)
T ss_dssp HHHHHHHHSCTTSCEEEEESCHHHHHHHHHHCTTSCEEEECSSCCTTHHHHHHHHTCSEEEEEGGGCCHHHHHHHHHTTC
T ss_pred HHHHHHHhCcccCCEEEEeCCHHHHHHHHHHCCCCcEEEEEecCchhHHHHHHHcCCeEEecchhhCCHHHHHHHHHCCC
Confidence 4444445443 36777777777777766555332222221 1122345678899999999
Q ss_pred cEEEEeecCCC
Q 025657 154 KAIALTVDTPR 164 (249)
Q Consensus 154 ~alvvTvD~p~ 164 (249)
+..+.|||.+.
T Consensus 212 ~v~~WTvn~~~ 222 (252)
T 3qvq_A 212 KVLAFTINDES 222 (252)
T ss_dssp EEEEECCCCHH
T ss_pred EEEEEcCCCHH
Confidence 99999998643
No 235
>2p8b_A Mandelate racemase/muconate lactonizing enzyme family protein; enolase superfamily, prediction of function; HET: NSK; 1.70A {Bacillus cereus atcc 14579} PDB: 2p88_A* 2p8c_A*
Probab=39.35 E-value=86 Score=27.55 Aligned_cols=36 Identities=11% Similarity=0.280 Sum_probs=29.9
Q ss_pred CCCHHHHHHHHHhCCCCEEEEcc-CCHHHHHHHhhCC
Q 025657 214 SLNWKDVKWLQTITSLPILVKGV-LTAEDGSKLLSKE 249 (249)
Q Consensus 214 ~~tW~dl~wlr~~~~lPivlKGI-l~~eDA~~A~~~~ 249 (249)
.-+|+.++.|++.++.||+.=+- .+++|++.+++.|
T Consensus 223 ~~d~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~ 259 (369)
T 2p8b_A 223 ADDIDAMAHIRSKTDLPLMIDEGLKSSREMRQIIKLE 259 (369)
T ss_dssp TTCHHHHHHHHHTCCSCEEESTTCCSHHHHHHHHHHT
T ss_pred cccHHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHhC
Confidence 45799999999999999998764 5899999887643
No 236
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=39.29 E-value=65 Score=28.14 Aligned_cols=85 Identities=16% Similarity=0.047 Sum_probs=50.8
Q ss_pred cceeeccccccccCCChhhHHHHHHHHhcCCc--EEecCCC---CCCHHHHH-------hcCC--CceeEEEccccChHH
Q 025657 75 MPIMIAPTAFQKMAHPEGECATARAASAAGTI--MTLSSWA---TSSVEEVS-------STGP--GIRFFQLYVTKHRNV 140 (249)
Q Consensus 75 ~Pi~iaP~g~~~l~h~~gE~~~AraA~~~gi~--~~lss~s---s~sleeia-------~~~~--~~~wfQlY~~~d~~~ 140 (249)
.|.++.|+.-.+-++.++=..+.+-.-+.|+- ++.||.+ +.|.||-. +... -+.+...-- .+-..
T Consensus 28 ~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~-~st~e 106 (314)
T 3qze_A 28 MVALVTPFDAQGRLDWDSLAKLVDFHLQEGTNAIVAVGTTGESATLDVEEHIQVIRRVVDQVKGRIPVIAGTGA-NSTRE 106 (314)
T ss_dssp EEECCCCBCTTSCBCHHHHHHHHHHHHHHTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECCC-SSHHH
T ss_pred EEeeECCCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCC-cCHHH
Confidence 45666776544434444444666666677774 4445433 34555432 2222 345555532 34566
Q ss_pred HHHHHHHHHHcCCcEEEEee
Q 025657 141 DAQLVKRAERAGFKAIALTV 160 (249)
Q Consensus 141 ~~~li~rA~~aG~~alvvTv 160 (249)
+.++.+.|+++|+.++++..
T Consensus 107 ai~la~~A~~~Gadavlv~~ 126 (314)
T 3qze_A 107 AVALTEAAKSGGADACLLVT 126 (314)
T ss_dssp HHHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHHHcCCCEEEEcC
Confidence 77999999999999999874
No 237
>3stp_A Galactonate dehydratase, putative; PSI biology, structural genomics, NEW YORK structural genomi research consortium; 1.88A {Labrenzia aggregata iam 12614} PDB: 3sqs_A 3ssz_A
Probab=39.18 E-value=75 Score=28.86 Aligned_cols=35 Identities=11% Similarity=0.127 Sum_probs=29.7
Q ss_pred CCHHHHHHHHHhCCCCEEEEc-cCCHHHHHHHhhCC
Q 025657 215 LNWKDVKWLQTITSLPILVKG-VLTAEDGSKLLSKE 249 (249)
Q Consensus 215 ~tW~dl~wlr~~~~lPivlKG-Il~~eDA~~A~~~~ 249 (249)
-+|+.++.||+.++.||..=+ +.+++|++.+++.|
T Consensus 268 ~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~li~~~ 303 (412)
T 3stp_A 268 DDVAGYAELNAMNIVPISGGEHEFSVIGCAELINRK 303 (412)
T ss_dssp TCHHHHHHHHHTCSSCEEECTTCCSHHHHHHHHHTT
T ss_pred ccHHHHHHHHhCCCCCEEeCCCCCCHHHHHHHHHcC
Confidence 378999999999999999865 67799999988754
No 238
>3qkb_A Uncharacterized protein; beta/alpha-propeller, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 2.73A {Pediococcus pentosaceus}
Probab=39.12 E-value=24 Score=26.63 Aligned_cols=28 Identities=21% Similarity=0.189 Sum_probs=21.6
Q ss_pred ChHHHHHHHHHHHHcCCcEEE-EeecCCC
Q 025657 137 HRNVDAQLVKRAERAGFKAIA-LTVDTPR 164 (249)
Q Consensus 137 d~~~~~~li~rA~~aG~~alv-vTvD~p~ 164 (249)
-.+...+|+++|++.|+.||+ |-+|+..
T Consensus 60 r~eA~~rM~e~A~~lGANAVIgvrfdts~ 88 (111)
T 3qkb_A 60 FDEAKQKLKKKADLLEGDGIIGLKYNTEV 88 (111)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHHcCCCEEEEEEEEhhh
Confidence 345677999999999999987 6666543
No 239
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=38.83 E-value=84 Score=27.35 Aligned_cols=84 Identities=10% Similarity=-0.015 Sum_probs=49.2
Q ss_pred cceeeccccccccCCChhhHHHHHHHHhcCCc--EEecCCC---CCCHHHH-------HhcCC-CceeEEEccccChHHH
Q 025657 75 MPIMIAPTAFQKMAHPEGECATARAASAAGTI--MTLSSWA---TSSVEEV-------SSTGP-GIRFFQLYVTKHRNVD 141 (249)
Q Consensus 75 ~Pi~iaP~g~~~l~h~~gE~~~AraA~~~gi~--~~lss~s---s~sleei-------a~~~~-~~~wfQlY~~~d~~~~ 141 (249)
.|.++.|+.-.+-++.++=..+++---+.|+- +++||.+ +.|.||= .+..+ -+.+...- ..+-..+
T Consensus 13 ~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Lt~~Er~~v~~~~v~~~grvpViaGvg-~~~t~~a 91 (313)
T 3dz1_A 13 FAIAPTPFHDDGKIDDVSIDRLTDFYAEVGCEGVTVLGILGEAPKLDAAEAEAVATRFIKRAKSMQVIVGVS-APGFAAM 91 (313)
T ss_dssp EEECCCCBCTTSCBCHHHHHHHHHHHHHTTCSEEEESTGGGTGGGSCHHHHHHHHHHHHHHCTTSEEEEECC-CSSHHHH
T ss_pred EEEeeCCCCCCCCcCHHHHHHHHHHHHHCCCCEEEeCccCcChhhCCHHHHHHHHHHHHHHcCCCcEEEecC-CCCHHHH
Confidence 34556665433333444444677777777874 4445433 3455533 22232 23455542 2355667
Q ss_pred HHHHHHHHHcCCcEEEEe
Q 025657 142 AQLVKRAERAGFKAIALT 159 (249)
Q Consensus 142 ~~li~rA~~aG~~alvvT 159 (249)
.++.++|+++|+.++++.
T Consensus 92 i~la~~A~~~Gadavlv~ 109 (313)
T 3dz1_A 92 RRLARLSMDAGAAGVMIA 109 (313)
T ss_dssp HHHHHHHHHHTCSEEEEC
T ss_pred HHHHHHHHHcCCCEEEEC
Confidence 789999999999999885
No 240
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=38.78 E-value=60 Score=27.84 Aligned_cols=155 Identities=19% Similarity=0.207 Sum_probs=73.2
Q ss_pred eecCcccccceeecccccccc-------CCChhhHHHHHHHHhc-CCcEEecCCCC----CCHHH----HHhcCCCceeE
Q 025657 67 TVLGFNISMPIMIAPTAFQKM-------AHPEGECATARAASAA-GTIMTLSSWAT----SSVEE----VSSTGPGIRFF 130 (249)
Q Consensus 67 ~llG~~~~~Pi~iaP~g~~~l-------~h~~gE~~~AraA~~~-gi~~~lss~ss----~slee----ia~~~~~~~wf 130 (249)
-.+|.+++-|+.=.|+=...+ ...+.=..+.+..++. .+|+++=++.+ +..+. .++++-. -.+
T Consensus 46 IElG~PfsdP~adGp~Iq~a~~~Al~~G~~~~~~~~~v~~ir~~~~~Pii~m~y~n~v~~~g~~~f~~~~~~aG~d-Gvi 124 (271)
T 1ujp_A 46 LEIGLPYSDPLGDGPVIQRASELALRKGMSVQGALELVREVRALTEKPLFLMTYLNPVLAWGPERFFGLFKQAGAT-GVI 124 (271)
T ss_dssp EEEECCCCC----CHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCCSCEEEECCHHHHHHHCHHHHHHHHHHHTCC-EEE
T ss_pred EEECCCCCCcccccHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCEEEEecCcHHHHhhHHHHHHHHHHcCCC-EEE
Confidence 346999999999888532110 1122223455555554 78888733222 12232 2223211 111
Q ss_pred EEccccChHHHHHHHHHHHHcCCcEEEEeecCCCCCCchhhhh---ccCCCCCccccccccccccCCCCCCCCchhhhHh
Q 025657 131 QLYVTKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIK---NRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYV 207 (249)
Q Consensus 131 QlY~~~d~~~~~~li~rA~~aG~~alvvTvD~p~~g~Re~d~r---~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (249)
=+ .-..+...++++.+++.|.+-+.+-.++.. -.|-+.+- .+|.. ...+.+. ...-
T Consensus 125 v~--Dl~~ee~~~~~~~~~~~gl~~i~liap~s~-~eri~~ia~~~~gfiy-----~vs~~G~-------------TG~~ 183 (271)
T 1ujp_A 125 LP--DLPPDEDPGLVRLAQEIGLETVFLLAPTST-DARIATVVRHATGFVY-----AVSVTGV-------------TGMR 183 (271)
T ss_dssp CT--TCCGGGCHHHHHHHHHHTCEEECEECTTCC-HHHHHHHHTTCCSCEE-----EECC--------------------
T ss_pred ec--CCCHHHHHHHHHHHHHcCCceEEEeCCCCC-HHHHHHHHHhCCCCEE-----EEecCcc-------------cCCC
Confidence 11 111255668889999999876655544311 12222221 11110 0000000 0000
Q ss_pred hhhcCCCCCHHHHHHHHHhCCCCEEEE-ccCCHHHHHHH
Q 025657 208 ANQIDRSLNWKDVKWLQTITSLPILVK-GVLTAEDGSKL 245 (249)
Q Consensus 208 ~~~~~~~~tW~dl~wlr~~~~lPivlK-GIl~~eDA~~A 245 (249)
. . .+.-..+.++.+|+.++.||++= ||-++|+|+.+
T Consensus 184 ~-~-~~~~~~~~v~~vr~~~~~Pv~vGfGI~t~e~a~~~ 220 (271)
T 1ujp_A 184 E-R-LPEEVKDLVRRIKARTALPVAVGFGVSGKATAAQA 220 (271)
T ss_dssp -------CCHHHHHHHHTTCCSCEEEESCCCSHHHHHHH
T ss_pred C-C-CCccHHHHHHHHHhhcCCCEEEEcCCCCHHHHHHh
Confidence 0 0 11223567899999999999986 57789999986
No 241
>2isw_A Putative fructose-1,6-bisphosphate aldolase; class II fructose-1,6-bisphosphate aldolase, glycolytic pathway, giardia lamblia, drug target; HET: PGH; 1.75A {Giardia intestinalis} PDB: 2isv_A* 3ohi_A* 3gay_A* 3gak_A* 3gb6_A*
Probab=38.76 E-value=24 Score=31.48 Aligned_cols=37 Identities=19% Similarity=0.359 Sum_probs=31.3
Q ss_pred CC--CCHHHHHHHHHhCCCCEEEEcc-----------------------CCHHHHHHHhhCC
Q 025657 213 RS--LNWKDVKWLQTITSLPILVKGV-----------------------LTAEDGSKLLSKE 249 (249)
Q Consensus 213 ~~--~tW~dl~wlr~~~~lPivlKGI-----------------------l~~eDA~~A~~~~ 249 (249)
|. |+++-|+.|++..+.|||+=|= ...|+-++|+++|
T Consensus 187 p~~~L~~~~L~~I~~~~~vpLVlHGgSsvp~~~~~~~~~~gg~~~~~~Gvp~e~i~~ai~~G 248 (323)
T 2isw_A 187 SDIRLAIDRVKTISDLTGIPLVMHGSSSVPKDVKDMINKYGGKMPDAVGVPIESIVHAIGEG 248 (323)
T ss_dssp ---CCCCHHHHHHHHHHCSCEEECSCCCCCHHHHHHHHHTTCCCTTCBCCCHHHHHHHHHTT
T ss_pred cccccCHHHHHHHHHHhCCCeEEECCCCCCHHHHHHHHHhccccccCCCCCHHHHHHHHHCC
Confidence 56 9999999999999999999994 4678888888877
No 242
>4e8g_A Enolase, mandelate racemase/muconate lactonizing enzyme, N domain protein; putative racemase, nysgrc, structural genomics, PSI-biology; 2.00A {Paracoccus denitrificans}
Probab=38.66 E-value=50 Score=29.77 Aligned_cols=37 Identities=3% Similarity=-0.076 Sum_probs=29.8
Q ss_pred CCCCHHHHHHHHHhCCCCEEEEc-cCCHHHHHHHhhCC
Q 025657 213 RSLNWKDVKWLQTITSLPILVKG-VLTAEDGSKLLSKE 249 (249)
Q Consensus 213 ~~~tW~dl~wlr~~~~lPivlKG-Il~~eDA~~A~~~~ 249 (249)
|.-+|+.++.|++.++.||..=. +.+.+|++.+++.|
T Consensus 243 P~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~ 280 (391)
T 4e8g_A 243 PCNTLEEIAAIRGRVQHGIYLDESGEDLSTVIRAAGQG 280 (391)
T ss_dssp CSSSHHHHHHHGGGCCSCEEESTTCCSHHHHHHHHHTT
T ss_pred CCccHHHHHHHHhhCCCCEEeCCCCCCHHHHHHHHHcC
Confidence 33479999999999999998843 56789998887654
No 243
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=38.60 E-value=1e+02 Score=27.71 Aligned_cols=41 Identities=10% Similarity=0.179 Sum_probs=24.4
Q ss_pred eeecCcccccceeeccccccccCCChh---hHHHHHHHHhcCCcEE
Q 025657 66 TTVLGFNISMPIMIAPTAFQKMAHPEG---ECATARAASAAGTIMT 108 (249)
Q Consensus 66 t~llG~~~~~Pi~iaP~g~~~l~h~~g---E~~~AraA~~~gi~~~ 108 (249)
.+|=+.++.-.|++|||+...- ++| |..+..-++.++..++
T Consensus 15 ~~ig~~~l~NRiv~aPm~~~~a--~~g~pt~~~~~~y~~rA~~GLi 58 (377)
T 2r14_A 15 LQLGSLSLPNRVIMAPLTRSRT--PDSVPGRLQQIYYGQRASAGLI 58 (377)
T ss_dssp EEETTEEESCSEEECCCCCCCC--TTSCCCHHHHHHHHHTTTSSCE
T ss_pred eeECCEEecCCeEECCCcCCcC--CCCCCCHHHHHHHHHHhcCCEE
Confidence 5666778889999999886532 332 4444444444444333
No 244
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=38.48 E-value=25 Score=29.89 Aligned_cols=35 Identities=14% Similarity=0.109 Sum_probs=26.0
Q ss_pred CCCHHHHHHHHHhC-----CCCEE-EEccCCHHHHHHHhhCC
Q 025657 214 SLNWKDVKWLQTIT-----SLPIL-VKGVLTAEDGSKLLSKE 249 (249)
Q Consensus 214 ~~tW~dl~wlr~~~-----~lPiv-lKGIl~~eDA~~A~~~~ 249 (249)
..+.+.+..|++.. +.|+| .=||.+++|+.++.+ |
T Consensus 189 ~~dl~~~~~L~~~i~~~~~~~~vIAegGI~s~~dv~~l~~-G 229 (254)
T 1vc4_A 189 HINLETAPRLGRLARKRGFGGVLVAESGYSRKEELKALEG-L 229 (254)
T ss_dssp CBCTTHHHHHHHHHHHTTCCSEEEEESCCCSHHHHHTTTT-T
T ss_pred CCCHHHHHHHHHhCccccCCCeEEEEcCCCCHHHHHHHHc-C
Confidence 44556777777765 56776 578999999999887 6
No 245
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=38.38 E-value=77 Score=27.55 Aligned_cols=85 Identities=13% Similarity=0.024 Sum_probs=49.4
Q ss_pred cceeeccccccccCCChhhHHHHHHHHhcCCc--EEecCCC---CCCHHHHH-------hcCC--CceeEEEccccChHH
Q 025657 75 MPIMIAPTAFQKMAHPEGECATARAASAAGTI--MTLSSWA---TSSVEEVS-------STGP--GIRFFQLYVTKHRNV 140 (249)
Q Consensus 75 ~Pi~iaP~g~~~l~h~~gE~~~AraA~~~gi~--~~lss~s---s~sleeia-------~~~~--~~~wfQlY~~~d~~~ 140 (249)
.|.++.|+.-.+-++.++=..+.+---+.|+- +++||.+ +.|.||=. +... -+.+...- ..+-..
T Consensus 13 ~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg-~~~t~~ 91 (309)
T 3fkr_A 13 FPVVPTTFADTGDLDLASQKRAVDFMIDAGSDGLCILANFSEQFAITDDERDVLTRTILEHVAGRVPVIVTTS-HYSTQV 91 (309)
T ss_dssp CCBCCCCBCTTSSBCHHHHHHHHHHHHHTTCSCEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECC-CSSHHH
T ss_pred EEeeeCCCCcCCCcCHHHHHHHHHHHHHcCCCEEEECccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEecC-CchHHH
Confidence 35556675433333444444666666677763 4445433 34555432 2212 34556652 235566
Q ss_pred HHHHHHHHHHcCCcEEEEee
Q 025657 141 DAQLVKRAERAGFKAIALTV 160 (249)
Q Consensus 141 ~~~li~rA~~aG~~alvvTv 160 (249)
+.++.++|+++|+.++++..
T Consensus 92 ai~la~~A~~~Gadavlv~~ 111 (309)
T 3fkr_A 92 CAARSLRAQQLGAAMVMAMP 111 (309)
T ss_dssp HHHHHHHHHHTTCSEEEECC
T ss_pred HHHHHHHHHHcCCCEEEEcC
Confidence 77899999999999998864
No 246
>1x60_A Sporulation-specific N-acetylmuramoyl-L-alanine amidase; CWLC, CWLCR, peptidoglycan, cell WALL lytic amidase, tandem repeats, hydrolase; NMR {Bacillus subtilis}
Probab=38.25 E-value=71 Score=21.42 Aligned_cols=33 Identities=30% Similarity=0.381 Sum_probs=29.6
Q ss_pred CceeEEEccccChHHHHHHHHHHHHcCCcEEEE
Q 025657 126 GIRFFQLYVTKHRNVDAQLVKRAERAGFKAIAL 158 (249)
Q Consensus 126 ~~~wfQlY~~~d~~~~~~li~rA~~aG~~alvv 158 (249)
+..|+|+-...+++..+.+.++.+..|+.+.++
T Consensus 8 ~~~~vQvGaf~~~~~A~~~~~~L~~~g~~~~i~ 40 (79)
T 1x60_A 8 GLYKVQIGAFKVKANADSLASNAEAKGFDSIVL 40 (79)
T ss_dssp CEEEEEEEEESCHHHHHHHHHHHHHHTCCEEEE
T ss_pred CCEEEEEEEcCCHHHHHHHHHHHHhCCCCeEEe
Confidence 557899999999999999999999999998875
No 247
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=38.20 E-value=37 Score=28.87 Aligned_cols=25 Identities=20% Similarity=0.222 Sum_probs=20.0
Q ss_pred cChHHHHHHHHHHHHcCCcEEEEee
Q 025657 136 KHRNVDAQLVKRAERAGFKAIALTV 160 (249)
Q Consensus 136 ~d~~~~~~li~rA~~aG~~alvvTv 160 (249)
.|.+.+.++++..+++|+.+|-+.+
T Consensus 28 p~~~~~~~~~~~l~~~GaD~ieig~ 52 (268)
T 1qop_A 28 PGIEQSLKIIDTLIDAGADALELGV 52 (268)
T ss_dssp SCHHHHHHHHHHHHHTTCSSEEEEC
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECC
Confidence 3447888999999999999987743
No 248
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=37.59 E-value=89 Score=27.84 Aligned_cols=44 Identities=14% Similarity=0.197 Sum_probs=25.7
Q ss_pred eeecCcccccceeeccccccccCCChh---hHHHHHHHHhcCCcEEe
Q 025657 66 TTVLGFNISMPIMIAPTAFQKMAHPEG---ECATARAASAAGTIMTL 109 (249)
Q Consensus 66 t~llG~~~~~Pi~iaP~g~~~l~h~~g---E~~~AraA~~~gi~~~l 109 (249)
.+|=+.++.-.|++|||+...-..++| |..+..-++.++..+++
T Consensus 9 ~~ig~~~l~NRiv~aPm~~~~a~~~~g~~t~~~~~~y~~rA~~GLii 55 (365)
T 2gou_A 9 ITLGALTLKNRIVMPPMTRSRASQPGDVANHMMAIYYAQRASAGLIV 55 (365)
T ss_dssp EEETTEEESSSEEECCCCCCCCBTTTTBCCHHHHHHHHTTTTSSEEE
T ss_pred eeECCEEEcCceEECCCCCCcccCCCCCCCHHHHHHHHHHhcCCEEE
Confidence 456677888899999987653211343 44444444444444443
No 249
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=37.55 E-value=98 Score=27.03 Aligned_cols=85 Identities=16% Similarity=0.112 Sum_probs=50.0
Q ss_pred cceeeccccccccCCChhhHHHHHHHHhcCCcE--EecCCC---CCCHHHHH-------hcCC--CceeEEEccccChHH
Q 025657 75 MPIMIAPTAFQKMAHPEGECATARAASAAGTIM--TLSSWA---TSSVEEVS-------STGP--GIRFFQLYVTKHRNV 140 (249)
Q Consensus 75 ~Pi~iaP~g~~~l~h~~gE~~~AraA~~~gi~~--~lss~s---s~sleeia-------~~~~--~~~wfQlY~~~d~~~ 140 (249)
.|.++.|+.-.+-++.++=..+++---+.|+-- ++||.+ +.|.||-. +... -+.+...- ..+-..
T Consensus 27 ~~alvTPf~~dg~iD~~~l~~li~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg-~~st~~ 105 (315)
T 3si9_A 27 VTALITPFDDNGAIDEKAFCNFVEWQITQGINGVSPVGTTGESPTLTHEEHKRIIELCVEQVAKRVPVVAGAG-SNSTSE 105 (315)
T ss_dssp EEECCCCBCTTSCBCHHHHHHHHHHHHHTTCSEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECC-CSSHHH
T ss_pred eEeeECCCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCC-CCCHHH
Confidence 355566754333334444446676667778744 344433 33555432 2212 34566653 235566
Q ss_pred HHHHHHHHHHcCCcEEEEee
Q 025657 141 DAQLVKRAERAGFKAIALTV 160 (249)
Q Consensus 141 ~~~li~rA~~aG~~alvvTv 160 (249)
+.++.++|+++|+.++++..
T Consensus 106 ai~la~~A~~~Gadavlv~~ 125 (315)
T 3si9_A 106 AVELAKHAEKAGADAVLVVT 125 (315)
T ss_dssp HHHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHHhcCCCEEEECC
Confidence 77899999999999998873
No 250
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=37.38 E-value=84 Score=26.99 Aligned_cols=84 Identities=13% Similarity=0.012 Sum_probs=45.9
Q ss_pred ceeeccccccccCCChhhHHHHHHHHh-cCCcE--EecCCC---CCCHHHHH-------hcCC--CceeEEEccccChHH
Q 025657 76 PIMIAPTAFQKMAHPEGECATARAASA-AGTIM--TLSSWA---TSSVEEVS-------STGP--GIRFFQLYVTKHRNV 140 (249)
Q Consensus 76 Pi~iaP~g~~~l~h~~gE~~~AraA~~-~gi~~--~lss~s---s~sleeia-------~~~~--~~~wfQlY~~~d~~~ 140 (249)
|.++.|+.-.+-++.++=..+.+-.-+ .|+-- +.||.+ +.|.||=. +... -+.+...- ..+-+.
T Consensus 9 ~a~vTPf~~dg~iD~~~l~~lv~~li~~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg-~~~t~~ 87 (293)
T 1f6k_A 9 SALLVSFNEDGTINEKGLRQIIRHNIDKMKVDGLYVGGSTGENFMLSTEEKKEIFRIAKDEAKDQIALIAQVG-SVNLKE 87 (293)
T ss_dssp EECCCCBCTTSCBCHHHHHHHHHHHHHTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECC-CSCHHH
T ss_pred EeeEcCCCCCCCcCHHHHHHHHHHHHhhCCCcEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEecC-CCCHHH
Confidence 445566543333344443466665666 77643 345432 34555432 2212 23444442 124466
Q ss_pred HHHHHHHHHHcCCcEEEEee
Q 025657 141 DAQLVKRAERAGFKAIALTV 160 (249)
Q Consensus 141 ~~~li~rA~~aG~~alvvTv 160 (249)
+.++.+.|+++|+.++++..
T Consensus 88 ai~la~~a~~~Gadavlv~~ 107 (293)
T 1f6k_A 88 AVELGKYATELGYDCLSAVT 107 (293)
T ss_dssp HHHHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHHHHhcCCCEEEECC
Confidence 77888999999999988873
No 251
>3q94_A Fructose-bisphosphate aldolase, class II; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel; HET: 13P; 2.30A {Bacillus anthracis} SCOP: c.1.10.0
Probab=36.63 E-value=17 Score=31.93 Aligned_cols=38 Identities=18% Similarity=0.386 Sum_probs=32.3
Q ss_pred CCCCCHHHHHHHHHhCCCCEEEEccC--CHHHHHHHhhCC
Q 025657 212 DRSLNWKDVKWLQTITSLPILVKGVL--TAEDGSKLLSKE 249 (249)
Q Consensus 212 ~~~~tW~dl~wlr~~~~lPivlKGIl--~~eDA~~A~~~~ 249 (249)
.|.|+++-|+.|++..+.|||+=|=. ..||-++|+++|
T Consensus 190 ~p~Ld~~~L~~I~~~v~vpLVlHGgSG~~~e~i~~ai~~G 229 (288)
T 3q94_A 190 EPNLGFAEMEQVRDFTGVPLVLHGGTGIPTADIEKAISLG 229 (288)
T ss_dssp SCCCCHHHHHHHHHHHCSCEEECCCTTCCHHHHHHHHHTT
T ss_pred CCccCHHHHHHHHHhcCCCEEEeCCCCCCHHHHHHHHHcC
Confidence 37899999999999999999999764 457788888876
No 252
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=36.35 E-value=1.8e+02 Score=24.02 Aligned_cols=32 Identities=22% Similarity=0.304 Sum_probs=24.0
Q ss_pred eeEEEccc---cChHHHHHHHHHHHHcCCcEEEEe
Q 025657 128 RFFQLYVT---KHRNVDAQLVKRAERAGFKAIALT 159 (249)
Q Consensus 128 ~wfQlY~~---~d~~~~~~li~rA~~aG~~alvvT 159 (249)
.-+-+|+. .+.+...+.++.++++|+..|-+.
T Consensus 18 ~~~~~~i~~g~~~~~~~~~~~~~l~~~Gad~ielg 52 (262)
T 1rd5_A 18 TAFIPYITAGDPDLATTAEALRLLDGCGADVIELG 52 (262)
T ss_dssp CEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEE
T ss_pred ceEEEEeeCCCCCHHHHHHHHHHHHHcCCCEEEEC
Confidence 45677873 334778888999999999988663
No 253
>2f6u_A GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate synthase; non-canonical TIM-barrel, prenyltransferase, archaeal lipid synthesis, dimer; HET: CIT; 1.55A {Archaeoglobus fulgidus} SCOP: c.1.4.1 PDB: 2f6x_A*
Probab=36.07 E-value=29 Score=29.37 Aligned_cols=34 Identities=15% Similarity=0.130 Sum_probs=29.3
Q ss_pred CCCHHHHHHHHHhC-CCCEEEE-ccCCHHHHHHHhh
Q 025657 214 SLNWKDVKWLQTIT-SLPILVK-GVLTAEDGSKLLS 247 (249)
Q Consensus 214 ~~tW~dl~wlr~~~-~lPivlK-GIl~~eDA~~A~~ 247 (249)
.-..+-++.+++.+ +.|+++= ||-++|+|+.+.+
T Consensus 175 ~~~~~~i~~i~~~~~~~Pv~vGgGI~s~e~a~~~~~ 210 (234)
T 2f6u_A 175 YGNPELVAEVKKVLDKARLFYGGGIDSREKAREMLR 210 (234)
T ss_dssp CCCHHHHHHHHHHCSSSEEEEESCCCSHHHHHHHHH
T ss_pred cchHHHHHHHHHhCCCCCEEEEecCCCHHHHHHHHh
Confidence 34578899999999 9999996 5999999999876
No 254
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=36.07 E-value=1.6e+02 Score=23.80 Aligned_cols=57 Identities=21% Similarity=0.153 Sum_probs=29.8
Q ss_pred HHHHHHHhcCCcEEecCCCCCCHHHHHhcCCCceeEEEccccChHHHHHHHHHHHHcCCcEEEE
Q 025657 95 ATARAASAAGTIMTLSSWATSSVEEVSSTGPGIRFFQLYVTKHRNVDAQLVKRAERAGFKAIAL 158 (249)
Q Consensus 95 ~~AraA~~~gi~~~lss~ss~sleeia~~~~~~~wfQlY~~~d~~~~~~li~rA~~aG~~alvv 158 (249)
.-++.|.+.|.-++++...+.++.+.+...+-+...-. .+ .+-+.+|.++|++.|.+
T Consensus 74 d~~~~A~~~GAd~v~~~~~d~~v~~~~~~~g~~~i~G~---~t----~~e~~~A~~~Gad~v~~ 130 (207)
T 2yw3_A 74 KEAEAALEAGAAFLVSPGLLEEVAALAQARGVPYLPGV---LT----PTEVERALALGLSALKF 130 (207)
T ss_dssp HHHHHHHHHTCSEEEESSCCHHHHHHHHHHTCCEEEEE---CS----HHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHcCCCEEEcCCCCHHHHHHHHHhCCCEEecC---CC----HHHHHHHHHCCCCEEEE
Confidence 34555566677777766544333333332222222232 12 23457778889888766
No 255
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=35.71 E-value=64 Score=30.06 Aligned_cols=39 Identities=21% Similarity=0.432 Sum_probs=31.0
Q ss_pred hhcccceeccccC---CCCCCccceeecC--------cccccceeecccc
Q 025657 45 AFSRILFRPRILR---DVSKIDMTTTVLG--------FNISMPIMIAPTA 83 (249)
Q Consensus 45 af~~~~l~pr~l~---~v~~~d~st~llG--------~~~~~Pi~iaP~g 83 (249)
-|+++.|+|..-. ..+++|++|.|-- ..+..|++.+++.
T Consensus 11 t~~d~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~iP~vsa~m~ 60 (503)
T 1me8_A 11 TFNEYLLIPGLSTVDCIPSNVNLSTPLVKFQKGQQSEINLKIPLVSAIMQ 60 (503)
T ss_dssp CGGGEEECCCCCCTTCCGGGCBCCEECSCEETTCCCSCEESSSEEECSCT
T ss_pred ccccEEEcCCCCCCccCCCcceeeeeccccccccccceeecCceEeccch
Confidence 3899999998765 2368899987764 7899999998864
No 256
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=35.28 E-value=36 Score=31.63 Aligned_cols=32 Identities=16% Similarity=0.100 Sum_probs=23.4
Q ss_pred cceeccccCCCCCCccceeecCcccccceeecc
Q 025657 49 ILFRPRILRDVSKIDMTTTVLGFNISMPIMIAP 81 (249)
Q Consensus 49 ~~l~pr~l~~v~~~d~st~llG~~~~~Pi~iaP 81 (249)
+.+.|+.. ....+.++++++|.++..||++|+
T Consensus 68 ~~~~~~~~-~~~~~~l~~~i~Gl~~~NPvglAA 99 (443)
T 1tv5_A 68 YNILPYDT-SNDSIYACTNIKHLDFINPFGVAA 99 (443)
T ss_dssp TTCSCCCC-SCCCGGGCEEETTEEESSSEEECT
T ss_pred ccCCcccc-cCCCccCCeEECCEEeCCCcEECC
Confidence 35555432 223456799999999999999996
No 257
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=35.20 E-value=30 Score=33.73 Aligned_cols=35 Identities=20% Similarity=0.245 Sum_probs=30.0
Q ss_pred CCHHHHHHHHHhCCCCEEEEc-cCCHHHHHHHhhCC
Q 025657 215 LNWKDVKWLQTITSLPILVKG-VLTAEDGSKLLSKE 249 (249)
Q Consensus 215 ~tW~dl~wlr~~~~lPivlKG-Il~~eDA~~A~~~~ 249 (249)
..|+.++++|+.++.||+.=| |.+++||+.+++.|
T Consensus 278 ~~~~~~~~i~~~~~~pvi~~G~i~~~~~a~~~l~~g 313 (729)
T 1o94_A 278 HTIPWVKLVKQVSKKPVLGVGRYTDPEKMIEIVTKG 313 (729)
T ss_dssp TTHHHHHHHHTTCSSCEECCSCCCCHHHHHHHHHTT
T ss_pred ccHHHHHHHHHHCCCEEEEeCCCCCHHHHHHHHHCC
Confidence 358889999999999999875 56899999999875
No 258
>1nh8_A ATP phosphoribosyltransferase; prtase, de novo His biosynthesis, PRPP, structural genomics, PSI, protei structure initiative; HET: AMP HIS; 1.80A {Mycobacterium tuberculosis H37RV} SCOP: c.94.1.1 d.58.5.3 PDB: 1nh7_A*
Probab=35.09 E-value=47 Score=29.40 Aligned_cols=65 Identities=12% Similarity=0.104 Sum_probs=47.9
Q ss_pred HHHHHHHhcCCcEEecCCCCCCHHHHHhcCC-----------CceeEEEccccChHHHHHHHHHHHHcCCcEEEEe
Q 025657 95 ATARAASAAGTIMTLSSWATSSVEEVSSTGP-----------GIRFFQLYVTKHRNVDAQLVKRAERAGFKAIALT 159 (249)
Q Consensus 95 ~~AraA~~~gi~~~lss~ss~sleeia~~~~-----------~~~wfQlY~~~d~~~~~~li~rA~~aG~~alvvT 159 (249)
.+..+-.+.+-.++.=+.....+|++.+..| ..-|+.+...-++....+++++.+++|++.|+++
T Consensus 222 rl~~vl~A~~~~~l~~nvp~~~l~~v~~~lPg~~~PTVspL~~~~wvAV~~vv~~~~~~~~~~~Lk~~GA~~Ilv~ 297 (304)
T 1nh8_A 222 RVQGVVFGQQYLMLDYDCPRSALKKATAITPGLESPTIAPLADPDWVAIRALVPRRDVNGIMDELAAIGAKAILAS 297 (304)
T ss_dssp HHHHHHHHTTEEEEEEEEEGGGHHHHHHHCCCSSSCEEEECSSTTEEEEEEEEEGGGHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHhcceEEEEEeCCHHHHHHHHHhccCCCCCeeeecCCCCeEEEEEEEcHHHHHHHHHHHHHcCCCeEEEe
Confidence 3333445555666655555667999987653 1248888888899999999999999999999876
No 259
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=34.98 E-value=71 Score=29.00 Aligned_cols=61 Identities=20% Similarity=0.184 Sum_probs=46.4
Q ss_pred hhhHHHHHHHHhcCCcEEecCCCCCCHHHHHhcCCCceeEEEccccChH-HHHHHHHHHHHcCCcEEE
Q 025657 91 EGECATARAASAAGTIMTLSSWATSSVEEVSSTGPGIRFFQLYVTKHRN-VDAQLVKRAERAGFKAIA 157 (249)
Q Consensus 91 ~gE~~~AraA~~~gi~~~lss~ss~sleeia~~~~~~~wfQlY~~~d~~-~~~~li~rA~~aG~~alv 157 (249)
+|-..+.+.|.+.|++++.+-+...+++.+++. ..|+|+ .-++ ....|++.+.+.|...++
T Consensus 193 egl~~L~~~~~~~Gl~~~te~~d~~~~~~l~~~---vd~lkI---gs~~~~n~~LL~~~a~~gkPVil 254 (385)
T 3nvt_A 193 EGLKILKRVSDEYGLGVISEIVTPADIEVALDY---VDVIQI---GARNMQNFELLKAAGRVDKPILL 254 (385)
T ss_dssp HHHHHHHHHHHHHTCEEEEECCSGGGHHHHTTT---CSEEEE---CGGGTTCHHHHHHHHTSSSCEEE
T ss_pred HHHHHHHHHHHHcCCEEEEecCCHHHHHHHHhh---CCEEEE---CcccccCHHHHHHHHccCCcEEE
Confidence 566689999999999999998888888888764 359999 3333 234788888887765543
No 260
>3q45_A Mandelate racemase/muconate lactonizing enzyme FA possible chloromuconate cycloisomerase...; (beta/alpha)8-barrel; 3.00A {Cytophaga hutchinsonii} PDB: 3q4d_A
Probab=34.74 E-value=40 Score=30.05 Aligned_cols=34 Identities=12% Similarity=0.289 Sum_probs=28.6
Q ss_pred CHHHHHHHHHhCCCCEEEEc-cCCHHHHHHHhhCC
Q 025657 216 NWKDVKWLQTITSLPILVKG-VLTAEDGSKLLSKE 249 (249)
Q Consensus 216 tW~dl~wlr~~~~lPivlKG-Il~~eDA~~A~~~~ 249 (249)
+|+.++.|++.++.||..=+ +.+++|++.+++.|
T Consensus 223 ~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~ 257 (368)
T 3q45_A 223 LYTALPKIRQACRIPIMADESCCNSFDAERLIQIQ 257 (368)
T ss_dssp GGGGHHHHHHTCSSCEEESTTCCSHHHHHHHHHTT
T ss_pred HHHHHHHHHhhCCCCEEEcCCcCCHHHHHHHHHcC
Confidence 57889999999999999865 67899999888654
No 261
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=34.68 E-value=38 Score=27.02 Aligned_cols=31 Identities=6% Similarity=0.054 Sum_probs=25.0
Q ss_pred HHHHHHHHhC-CCCEEE--EccCC-HHH-HHHHhhCC
Q 025657 218 KDVKWLQTIT-SLPILV--KGVLT-AED-GSKLLSKE 249 (249)
Q Consensus 218 ~dl~wlr~~~-~lPivl--KGIl~-~eD-A~~A~~~~ 249 (249)
+.++.||+.+ +.|+++ | +.+ ++. ++.|.++|
T Consensus 42 ~~i~~l~~~~~~~~i~~~l~-~~di~~~~~~~a~~~G 77 (207)
T 3ajx_A 42 SVITAVKKAHPDKIVFADMK-TMDAGELEADIAFKAG 77 (207)
T ss_dssp HHHHHHHHHSTTSEEEEEEE-ECSCHHHHHHHHHHTT
T ss_pred HHHHHHHHhCCCCeEEEEEE-ecCccHHHHHHHHhCC
Confidence 4688999998 789885 8 778 787 88888776
No 262
>3fv9_G Mandelate racemase/muconate lactonizing enzyme; structural genomics, mandelate racemase/muconatelactonizing hydrolase, PSI-2; 1.90A {Roseovarius nubinhibens ism} PDB: 2pce_A
Probab=34.66 E-value=91 Score=27.90 Aligned_cols=34 Identities=24% Similarity=0.473 Sum_probs=28.8
Q ss_pred CHHHHHHHHHhCCCCEEEEc-cCCHHHHHHHhhCC
Q 025657 216 NWKDVKWLQTITSLPILVKG-VLTAEDGSKLLSKE 249 (249)
Q Consensus 216 tW~dl~wlr~~~~lPivlKG-Il~~eDA~~A~~~~ 249 (249)
+|+.++.|++.++.||..=. +.+++|++.+++.|
T Consensus 231 ~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~ 265 (386)
T 3fv9_G 231 SWAETKSLRARCALPLLLDELIQTETDLIAAIRDD 265 (386)
T ss_dssp SHHHHHHHHTTCCSCEEESTTCCSHHHHHHHHHTT
T ss_pred CHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHhC
Confidence 89999999999999998854 66789999888654
No 263
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=34.58 E-value=1.4e+02 Score=26.81 Aligned_cols=84 Identities=8% Similarity=-0.105 Sum_probs=50.7
Q ss_pred cceeeccccccccCCChhhHHHHHHHHhcCCc--EEecCCC---CCCHHHHH-------hcCC--CceeEEEccccChHH
Q 025657 75 MPIMIAPTAFQKMAHPEGECATARAASAAGTI--MTLSSWA---TSSVEEVS-------STGP--GIRFFQLYVTKHRNV 140 (249)
Q Consensus 75 ~Pi~iaP~g~~~l~h~~gE~~~AraA~~~gi~--~~lss~s---s~sleeia-------~~~~--~~~wfQlY~~~d~~~ 140 (249)
.|-++.|+.-.+-++.++=..+++---+.|+- +++||.+ +.|.||=. +... -+.....- ..+-+.
T Consensus 64 ~~alvTPF~~dg~ID~~al~~lv~~li~~Gv~Gl~v~GTTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg-~~st~e 142 (360)
T 4dpp_A 64 ITAIKTPYLPDGRFDLEAYDDLVNIQIQNGAEGVIVGGTTGEGQLMSWDEHIMLIGHTVNCFGGSIKVIGNTG-SNSTRE 142 (360)
T ss_dssp EEECCCCBCTTSSBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECC-CSSHHH
T ss_pred EEEEeCcCCCCCCcCHHHHHHHHHHHHHcCCCEEEecccccChhhCCHHHHHHHHHHHHHHhCCCCeEEEecC-CCCHHH
Confidence 45566776544434454445666666677874 3445544 33555432 2222 23455542 235667
Q ss_pred HHHHHHHHHHcCCcEEEEe
Q 025657 141 DAQLVKRAERAGFKAIALT 159 (249)
Q Consensus 141 ~~~li~rA~~aG~~alvvT 159 (249)
+.++.++|+++|+.++++.
T Consensus 143 ai~la~~A~~~Gadavlvv 161 (360)
T 4dpp_A 143 AIHATEQGFAVGMHAALHI 161 (360)
T ss_dssp HHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHHHHcCCCEEEEc
Confidence 7799999999999999887
No 264
>2oog_A Glycerophosphoryl diester phosphodiesterase; phosphatase, ST genomics, protein structure initiative, PSI; 2.20A {Staphylococcus aureus subsp} PDB: 2p76_A
Probab=34.10 E-value=26 Score=29.94 Aligned_cols=70 Identities=13% Similarity=0.161 Sum_probs=43.1
Q ss_pred hHHHHHHHHhcCC---------cEEecCCCCCCHHHHHhcCCCceeEEEcccc-----------------------ChHH
Q 025657 93 ECATARAASAAGT---------IMTLSSWATSSVEEVSSTGPGIRFFQLYVTK-----------------------HRNV 140 (249)
Q Consensus 93 E~~~AraA~~~gi---------~~~lss~ss~sleeia~~~~~~~wfQlY~~~-----------------------d~~~ 140 (249)
+..+++.-.+.|. ..++||+...+++.+.+..|.....+|+... -...
T Consensus 150 ~~~v~~~l~~~~~~~~~~~~~~~vii~SF~~~~l~~~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 229 (287)
T 2oog_A 150 EEQLLASLKKHHLLNNNKLKNGHVMIQSFSDESLKKIHRQNKHVPLVKLVDKGELQQFNDQRLKEIRSYAIGLGPDYTDL 229 (287)
T ss_dssp HHHHHHHHHHTTCSSHHHHHTTSEEEEESCHHHHHHHHHHCTTSCEEEEECTTTGGGCCHHHHHHHHTTCSEEEEBGGGC
T ss_pred HHHHHHHHHHcCCcccccCCCCCEEEEeCCHHHHHHHHHhCCCCcEEEEecCCcccccCHHHHHHHhhhheEEcccHhhc
Confidence 4456666666654 3677777777777777665544434443211 1122
Q ss_pred HHHHHHHHHHcCCcEEEEeecC
Q 025657 141 DAQLVKRAERAGFKAIALTVDT 162 (249)
Q Consensus 141 ~~~li~rA~~aG~~alvvTvD~ 162 (249)
+.+++++++++|.+..+.|||.
T Consensus 230 ~~~~v~~~~~~G~~v~~wTvn~ 251 (287)
T 2oog_A 230 TEQNTHHLKDLGFIVHPYTVNE 251 (287)
T ss_dssp CHHHHHHHHHTTCEECCBCCCS
T ss_pred CHHHHHHHHHCCCeEEEEeCCC
Confidence 4567788888888888778765
No 265
>4hpn_A Putative uncharacterized protein; enolase, enzyme function initiative, EFI, structural genomic isomerase; 1.60A {Agrobacterium tumefaciens} PDB: 4ggb_A
Probab=34.01 E-value=1.1e+02 Score=27.07 Aligned_cols=100 Identities=13% Similarity=0.140 Sum_probs=58.0
Q ss_pred CceeEEEccccChHHHHHHHHHHHHc-CCcEEEEeecCCCCCCchhh-hhccCCCCCccccccccccccCCCCCCCCchh
Q 025657 126 GIRFFQLYVTKHRNVDAQLVKRAERA-GFKAIALTVDTPRLGRREAD-IKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGL 203 (249)
Q Consensus 126 ~~~wfQlY~~~d~~~~~~li~rA~~a-G~~alvvTvD~p~~g~Re~d-~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 203 (249)
+-..+++.+..+.+...+.++.++++ |.+ +-+-||+.. ++...+ ++.. +.+....+
T Consensus 159 Gf~~~K~k~g~~~~~di~~v~avr~~~g~~-~~l~vDaN~-~~~~~~A~~~~---------~~l~~~~i----------- 216 (378)
T 4hpn_A 159 GFHACKIKIGFGVEEDLRVIAAVREAIGPD-MRLMIDANH-GYTVTEAITLG---------DRAAGFGI----------- 216 (378)
T ss_dssp TCSEEEEECCSCHHHHHHHHHHHHHHHTTT-SEEEEECTT-CCCHHHHHHHH---------HHHGGGCC-----------
T ss_pred ccceecccccCChHHHHHHHHHHHHhcCCc-EEEEEecCc-ccCHHHHHHHH---------hhhhhccc-----------
Confidence 44567777767777767788888765 554 456778644 332222 1100 00111000
Q ss_pred hhHhhhhcCCCCCHHHHHHHHHhCCCCEEEE-ccCCHHHHHHHhhCC
Q 025657 204 ASYVANQIDRSLNWKDVKWLQTITSLPILVK-GVLTAEDGSKLLSKE 249 (249)
Q Consensus 204 ~~~~~~~~~~~~tW~dl~wlr~~~~lPivlK-GIl~~eDA~~A~~~~ 249 (249)
.++...+ +.-+|+.+++|++.++.||..= -+.+.+|++.+++.|
T Consensus 217 -~~iEeP~-~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~ 261 (378)
T 4hpn_A 217 -DWFEEPV-VPEQLDAYARVRAGQPIPVAGGETWHGRYGMWQALSAG 261 (378)
T ss_dssp -SCEECCS-CTTCHHHHHHHHHHSSSCEEECTTCCHHHHHHHHHHTT
T ss_pred -chhhcCC-CccchhhhHHHHhhCCceeeCCcCccchHhHHHHHHcC
Confidence 0111111 2457899999999999998763 366788888887754
No 266
>2ps2_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9440A, enolase superfamily, PSI-2; 1.80A {Aspergillus oryzae RIB40}
Probab=33.52 E-value=1.1e+02 Score=26.91 Aligned_cols=34 Identities=21% Similarity=0.426 Sum_probs=29.4
Q ss_pred CHHHHHHHHHhCCCCEEEEc-cCCHHHHHHHhhCC
Q 025657 216 NWKDVKWLQTITSLPILVKG-VLTAEDGSKLLSKE 249 (249)
Q Consensus 216 tW~dl~wlr~~~~lPivlKG-Il~~eDA~~A~~~~ 249 (249)
+|+.++.|++.++.||+.=+ +.+++|++.+++.|
T Consensus 227 ~~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~ 261 (371)
T 2ps2_A 227 TWRECISLRRKTDIPIIYDELATNEMSIVKILADD 261 (371)
T ss_dssp SHHHHHHHHTTCCSCEEESTTCCSHHHHHHHHHHT
T ss_pred CHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHhC
Confidence 89999999999999999866 56899999987654
No 267
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=33.52 E-value=1.2e+02 Score=26.12 Aligned_cols=82 Identities=15% Similarity=0.162 Sum_probs=48.3
Q ss_pred ceeEEEccc---cChHHHHHHHHHHHHcCCcEEEEeecCCCCCCchhhhhccCCCCCccccccccccccCCCCCCCCchh
Q 025657 127 IRFFQLYVT---KHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGL 203 (249)
Q Consensus 127 ~~wfQlY~~---~d~~~~~~li~rA~~aG~~alvvTvD~p~~g~Re~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 203 (249)
..-|=.|+. .|.+.+.++++...++|+..|=+.+= |+-| ...+ .-+
T Consensus 19 ~~ali~yi~aGdP~~~~~~~~~~~l~~~GaD~iElGiP--------------fSDP------~aDG-----------pvI 67 (271)
T 3nav_A 19 QGAFVPFVTIGDPNPEQSLAIMQTLIDAGADALELGMP--------------FSDP------LADG-----------PTI 67 (271)
T ss_dssp BCEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECC--------------CCCG------GGCC-----------SHH
T ss_pred CCeEEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECCC--------------CCCC------CCCC-----------HHH
Confidence 345556664 45688999999999999988755432 1112 0111 111
Q ss_pred hhHhhhhcCCCCC----HHHHHHHHHh-CCCCEEEEccCCH
Q 025657 204 ASYVANQIDRSLN----WKDVKWLQTI-TSLPILVKGVLTA 239 (249)
Q Consensus 204 ~~~~~~~~~~~~t----W~dl~wlr~~-~~lPivlKGIl~~ 239 (249)
.......+....+ ++.++.+|+. .+.||++-|-.++
T Consensus 68 q~a~~rAL~~G~~~~~~~~~v~~~r~~~~~~Pivlm~Y~n~ 108 (271)
T 3nav_A 68 QGANLRALAAKTTPDICFELIAQIRARNPETPIGLLMYANL 108 (271)
T ss_dssp HHHHHHHHHTTCCHHHHHHHHHHHHHHCTTSCEEEEECHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEecCcH
Confidence 1111112222344 4678888887 8899999986664
No 268
>1y2i_A Hypothetical protein S0862; structural genomics, pentamer, protein structure initiative, PSI, midwest center for structural genomics; 2.30A {Shigella flexneri 2a str} SCOP: d.230.5.1
Probab=33.50 E-value=29 Score=26.95 Aligned_cols=28 Identities=18% Similarity=0.221 Sum_probs=21.8
Q ss_pred hHHHHHHHHHHHHcCCcEEE-EeecCCCC
Q 025657 138 RNVDAQLVKRAERAGFKAIA-LTVDTPRL 165 (249)
Q Consensus 138 ~~~~~~li~rA~~aG~~alv-vTvD~p~~ 165 (249)
++...+|.++|++.|+.||| |.+|....
T Consensus 83 ~~Al~rm~~~A~~lGAnAVVGvr~d~~~i 111 (133)
T 1y2i_A 83 EIAFEELGSQARALGADAVVGIDIDYETV 111 (133)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHcCCCEEEEEEEEeeee
Confidence 35667899999999999987 66666543
No 269
>1nsj_A PRAI, phosphoribosyl anthranilate isomerase; thermostability; 2.00A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1lbm_A 1dl3_A
Probab=33.17 E-value=1.3e+02 Score=24.51 Aligned_cols=34 Identities=12% Similarity=0.229 Sum_probs=26.5
Q ss_pred CCCCHHHHHHHHHhCCCCEEEEccCCHHHHHHHhh
Q 025657 213 RSLNWKDVKWLQTITSLPILVKGVLTAEDGSKLLS 247 (249)
Q Consensus 213 ~~~tW~dl~wlr~~~~lPivlKGIl~~eDA~~A~~ 247 (249)
..++|+-++.++ ..+.|++|=|=++||....|++
T Consensus 137 ~~fdw~~l~~~~-~~~~p~~LAGGL~peNV~~ai~ 170 (205)
T 1nsj_A 137 KTFDWSLILPYR-DRFRYLVLSGGLNPENVRSAID 170 (205)
T ss_dssp SCCCGGGTGGGG-GGSSCEEEESSCCTTTHHHHHH
T ss_pred CccCHHHHHhhh-cCCCcEEEECCCCHHHHHHHHH
Confidence 478898765442 3478999999999999988865
No 270
>3tml_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.90A {Burkholderia cenocepacia} PDB: 3t4c_A
Probab=32.99 E-value=67 Score=28.08 Aligned_cols=69 Identities=16% Similarity=0.190 Sum_probs=43.3
Q ss_pred cccccCCChhhHHHHHHHHhcCCcEEecCCCCCCHHHHHhcCCCceeEEEccccChHHHHHHHHHHHHcCCcEE
Q 025657 83 AFQKMAHPEGECATARAASAAGTIMTLSSWATSSVEEVSSTGPGIRFFQLYVTKHRNVDAQLVKRAERAGFKAI 156 (249)
Q Consensus 83 g~~~l~h~~gE~~~AraA~~~gi~~~lss~ss~sleeia~~~~~~~wfQlY~~~d~~~~~~li~rA~~aG~~al 156 (249)
+++++.-.+|=..+.+.+.+.|+++...-+...+++.+++.. .|+|+=-..-+ +.++++.+.+.|...+
T Consensus 67 sf~Glg~~~GL~~L~~~~~e~Glp~~tev~d~~~v~~l~~~v---d~lkIgA~~~~--n~~LLr~~a~~gkPVi 135 (288)
T 3tml_A 67 SFRGLGMDEGLRILSEVKRQLGLPVLTDVHSIDEIEQVASVV---DVLQTPAFLCR--QTDFIHACARSGKPVN 135 (288)
T ss_dssp -----CHHHHHHHHHHHHHHHCCCEEEECCSGGGHHHHHHHC---SEEEECGGGTT--CHHHHHHHHTSSSCEE
T ss_pred CcCCcCHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHHhC---CEEEECccccc--CHHHHHHHHccCCcEE
Confidence 344442134545799999999999998888888888887763 48888332222 2346776666665443
No 271
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=32.77 E-value=84 Score=26.97 Aligned_cols=23 Identities=13% Similarity=0.122 Sum_probs=15.8
Q ss_pred ChHHHHHHHHHHHHcCCcEEEEe
Q 025657 137 HRNVDAQLVKRAERAGFKAIALT 159 (249)
Q Consensus 137 d~~~~~~li~rA~~aG~~alvvT 159 (249)
+-..+.++.+.|+++|+.++++.
T Consensus 81 ~t~~ai~la~~a~~~Gadavlv~ 103 (292)
T 2ojp_A 81 ATAEAISLTQRFNDSGIVGCLTV 103 (292)
T ss_dssp SHHHHHHHHHHTTTSSCSEEEEE
T ss_pred cHHHHHHHHHHHHhcCCCEEEEC
Confidence 33555677777777788777776
No 272
>1zcc_A Glycerophosphodiester phosphodiesterase; NYSGXRC, agrobacterium tumefaciens STR. C58, structural genomics; 2.50A {Agrobacterium tumefaciens str} SCOP: c.1.18.3
Probab=32.67 E-value=60 Score=26.96 Aligned_cols=70 Identities=11% Similarity=0.127 Sum_probs=43.4
Q ss_pred HHHHHHHHhcCC--cEEecCCCCCCHHHHHhcCCCceeEEEcc-----------------ccCh-HH-HHHHHHHHHHcC
Q 025657 94 CATARAASAAGT--IMTLSSWATSSVEEVSSTGPGIRFFQLYV-----------------TKHR-NV-DAQLVKRAERAG 152 (249)
Q Consensus 94 ~~~AraA~~~gi--~~~lss~ss~sleeia~~~~~~~wfQlY~-----------------~~d~-~~-~~~li~rA~~aG 152 (249)
..+++..++.|. ..++||+....++.+.+..|...-..++. .-+. .. +.+++++++++|
T Consensus 115 ~~v~~~l~~~~~~~~v~i~Sf~~~~l~~~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~v~~~~~~G 194 (248)
T 1zcc_A 115 AKVAALVRHLGMVRDTFYFSFSEEMRQGLQSIAPEFRRMMTLDIAKSPSLVGAVHHASIIEITPAQMRRPGIIEASRKAG 194 (248)
T ss_dssp HHHHHHHHHHTCSTTEEEECSCHHHHHHHHHHCTTSEEEEEHHHHSSTHHHHHTTCCSEEEECHHHHHSHHHHHHHHHHT
T ss_pred HHHHHHHHHhCCCCCEEEEECCHHHHHHHHHHCCCCcEEEEecCCccHHHHHHHcCCCEEEecHHHhCCHHHHHHHHHCC
Confidence 345555555543 46777777767777766555322222211 0122 23 578999999999
Q ss_pred CcEEEEeecCC
Q 025657 153 FKAIALTVDTP 163 (249)
Q Consensus 153 ~~alvvTvD~p 163 (249)
.+..+.|||.+
T Consensus 195 ~~v~~wTvn~~ 205 (248)
T 1zcc_A 195 LEIMVYYGGDD 205 (248)
T ss_dssp CEEEEECCCCC
T ss_pred CEEEEECCCCH
Confidence 99999999865
No 273
>3n9r_A Fructose-bisphosphate aldolase; FBP aldolase, class II, inhibitor, lyase; HET: TD3; 1.80A {Helicobacter pylori} SCOP: c.1.10.0 PDB: 3c52_A* 3c56_A* 3c4u_A* 3n9s_A*
Probab=32.56 E-value=45 Score=29.53 Aligned_cols=38 Identities=13% Similarity=0.306 Sum_probs=32.2
Q ss_pred CCCCCHHHHHHHHHhCCCCEEEEccC-----------------------CHHHHHHHhhCC
Q 025657 212 DRSLNWKDVKWLQTITSLPILVKGVL-----------------------TAEDGSKLLSKE 249 (249)
Q Consensus 212 ~~~~tW~dl~wlr~~~~lPivlKGIl-----------------------~~eDA~~A~~~~ 249 (249)
.|.|+++-|+.|++..+.|||+=|-. ..||-++|+++|
T Consensus 188 ~p~Ld~~~L~~I~~~~~~PLVlHGgS~vp~~~~~~~~~~gg~~~~~~G~p~e~i~~ai~~G 248 (307)
T 3n9r_A 188 EPKLDFERLQEVKRLTNIPLVLHGASAIPDNVRKSYLDAGGDLKGSKGVPFEFLQESVKGG 248 (307)
T ss_dssp SCCCCHHHHHHHHHHHCSCEEESSCCCCCHHHHHHHHHTTCCCTTCBCCCHHHHHHHHHTT
T ss_pred CCccCHHHHHHHHhcCCCCeEEeCCCCcchHHHHHHHHhcCccCCCCCCCHHHHHHHHHcC
Confidence 37899999999988889999999854 578888888776
No 274
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=32.37 E-value=29 Score=29.60 Aligned_cols=36 Identities=28% Similarity=0.369 Sum_probs=30.3
Q ss_pred CCCHHHHHHHHHhCCCCEEEE---ccCCHHHHHHHhhCC
Q 025657 214 SLNWKDVKWLQTITSLPILVK---GVLTAEDGSKLLSKE 249 (249)
Q Consensus 214 ~~tW~dl~wlr~~~~lPivlK---GIl~~eDA~~A~~~~ 249 (249)
.-|-+|++-+|+..+.++=|| ||-+.+||..-+++|
T Consensus 184 gAt~~dv~lmr~~vg~~v~VKasGGIrt~~da~~~i~aG 222 (239)
T 3ngj_A 184 GATPEDVKLMKDTVGDKALVKAAGGIRTFDDAMKMINNG 222 (239)
T ss_dssp CCCHHHHHHHHHHHGGGSEEEEESSCCSHHHHHHHHHTT
T ss_pred CCCHHHHHHHHHhhCCCceEEEeCCCCCHHHHHHHHHhc
Confidence 456789999999987766666 699999999999887
No 275
>3q94_A Fructose-bisphosphate aldolase, class II; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel; HET: 13P; 2.30A {Bacillus anthracis} SCOP: c.1.10.0
Probab=32.30 E-value=47 Score=29.08 Aligned_cols=60 Identities=18% Similarity=0.137 Sum_probs=31.6
Q ss_pred HHHHHHHhcCCcEEecCCC----C-CCHHHH-------Hh--cCCCceeEEEccccChHHHHHHHHHHHHcCCcEEEE
Q 025657 95 ATARAASAAGTIMTLSSWA----T-SSVEEV-------SS--TGPGIRFFQLYVTKHRNVDAQLVKRAERAGFKAIAL 158 (249)
Q Consensus 95 ~~AraA~~~gi~~~lss~s----s-~sleei-------a~--~~~~~~wfQlY~~~d~~~~~~li~rA~~aG~~alvv 158 (249)
++.+||++.+.|.+|...- - ..++.+ ++ ...-|..++| |.....+.+.+|-++||+.+++
T Consensus 36 avi~AAee~~sPvIlq~s~~~~~~~~g~~~~~~~v~~~A~~~~~~VPValHl----DHg~~~e~i~~ai~~GFtSVMi 109 (288)
T 3q94_A 36 AILAAAEEEKSPVILGVSEGAARHMTGFKTVVAMVKALIEEMNITVPVAIHL----DHGSSFEKCKEAIDAGFTSVMI 109 (288)
T ss_dssp HHHHHHHHTTCCEEEEEEHHHHHHTSCHHHHHHHHHHHHHHTTCCSCEEEEE----EEECSHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHhCCCEEEECChhhhhhcCCHHHHHHHHHHHHHhcCCCCcEEEEC----CCCCCHHHHHHHHHcCCCeEEE
Confidence 6666667777666654210 0 122222 22 2223445555 5555566667777777777654
No 276
>1wdi_A Hypothetical protein TT0907; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; HET: CIT; 2.10A {Thermus thermophilus} SCOP: e.53.1.1
Probab=32.24 E-value=1.2e+02 Score=27.21 Aligned_cols=70 Identities=16% Similarity=0.127 Sum_probs=41.1
Q ss_pred eccccccccCCChhhHHHHHHHHhcCCcE-------EecCCCCCCHHHHHhcCCCceeEEEccccChHHHHHHHHHHHHc
Q 025657 79 IAPTAFQKMAHPEGECATARAASAAGTIM-------TLSSWATSSVEEVSSTGPGIRFFQLYVTKHRNVDAQLVKRAERA 151 (249)
Q Consensus 79 iaP~g~~~l~h~~gE~~~AraA~~~gi~~-------~lss~ss~sleeia~~~~~~~wfQlY~~~d~~~~~~li~rA~~a 151 (249)
-|||++-. =.. .+-..-++.||-+ .+||+-... |+|.+.....-||.+ . +.+.+.|++|++.
T Consensus 181 AAPTAGLH---Ft~--~Ll~~L~~kGv~~a~vTLHVG~GTF~PV~-e~i~~H~MHsE~~~V----~-~~ta~~in~aka~ 249 (345)
T 1wdi_A 181 AAPTAGLH---FTP--ELLERLREMGVELRFLTLHVGPGTFRPVK-GDPEKHEMHAEPYAI----P-EEVAEAVNRAKAE 249 (345)
T ss_dssp CCCCGGGG---CCH--HHHHHHHHTTCEEEEEEEEESGGGCCC----------CCCEEEEE----C-HHHHHHHHHHHHT
T ss_pred hcCCCCCC---CCH--HHHHHHHHCCCeEEEEEEeecCCCCcccc-cchhcCCccceEEEE----C-HHHHHHHHHHHHc
Confidence 45666543 222 3455556666644 467777777 888876555679988 3 4566899999999
Q ss_pred CCcEEEEe
Q 025657 152 GFKAIALT 159 (249)
Q Consensus 152 G~~alvvT 159 (249)
|-+.|.|.
T Consensus 250 G~RViAVG 257 (345)
T 1wdi_A 250 GRRVVAVG 257 (345)
T ss_dssp TCCEEEES
T ss_pred CCeEEEEe
Confidence 99988874
No 277
>3mz2_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics; HET: MSE PE4; 1.55A {Parabacteroides distasonis}
Probab=32.03 E-value=68 Score=27.63 Aligned_cols=69 Identities=12% Similarity=0.084 Sum_probs=42.0
Q ss_pred HHHHHHHhcCC--cEEecCCCCCCHHHHHhcCCCceeE-----------------------EEccccChHHHHHHHHHHH
Q 025657 95 ATARAASAAGT--IMTLSSWATSSVEEVSSTGPGIRFF-----------------------QLYVTKHRNVDAQLVKRAE 149 (249)
Q Consensus 95 ~~AraA~~~gi--~~~lss~ss~sleeia~~~~~~~wf-----------------------QlY~~~d~~~~~~li~rA~ 149 (249)
.+++..++.|. ..+++|++...+..+.+..|..... ..|-+.....+.+++++|.
T Consensus 146 ~v~~~l~~~~~~~~vii~Sf~~~~l~~~~~~~p~~~~~~l~~~~~~l~~~~~~g~~~~~~~~~~~~~~~~~~~~~V~~ah 225 (292)
T 3mz2_A 146 RTAQLITDMQAEPYVMITVHDGASARFFYEKNPNFMFEAFVKTKEAVQDYEDNGIPWSHIMAYVGPKITPEVREVIDMLH 225 (292)
T ss_dssp HHHHHHHHTTCTTTEEEEESSHHHHHHHHHHCTTCCEEEECCSHHHHHHHHHTTCCGGGEEEEEESSCCHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCCCEEEEECCHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHhCCChhheeeeecccccccCHHHHHHHH
Confidence 34445555443 4566666555556665544432221 2222234456789999999
Q ss_pred HcCCcEEEEeecCC
Q 025657 150 RAGFKAIALTVDTP 163 (249)
Q Consensus 150 ~aG~~alvvTvD~p 163 (249)
+.|.+..+.||+++
T Consensus 226 ~~G~~V~vWTv~t~ 239 (292)
T 3mz2_A 226 ERGVMCMISTAPSD 239 (292)
T ss_dssp HTTBCEEEECTTTG
T ss_pred HCCCEEEEEeCCCc
Confidence 99999999998764
No 278
>3tj4_A Mandelate racemase; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.50A {Agrobacterium tumefaciens} PDB: 4h19_A*
Probab=31.83 E-value=1.6e+02 Score=25.96 Aligned_cols=36 Identities=17% Similarity=0.136 Sum_probs=29.9
Q ss_pred CCCHHHHHHHHHhCCCCEEEEc-cCCHHHHHHHhhCC
Q 025657 214 SLNWKDVKWLQTITSLPILVKG-VLTAEDGSKLLSKE 249 (249)
Q Consensus 214 ~~tW~dl~wlr~~~~lPivlKG-Il~~eDA~~A~~~~ 249 (249)
.-+|+.++.|++.++.||..=+ +.+++|++.+++.|
T Consensus 234 ~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~ 270 (372)
T 3tj4_A 234 YDDVTSHARLARNTSIPIALGEQLYTVDAFRSFIDAG 270 (372)
T ss_dssp TTCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTT
T ss_pred chhHHHHHHHHhhcCCCEEeCCCccCHHHHHHHHHcC
Confidence 3478999999999999999865 67799999988754
No 279
>3ik4_A Mandelate racemase/muconate lactonizing protein; structural genomics, enolase, epimerase, PSI-2, protein STRU initiative; 2.10A {Herpetosiphon aurantiacus atcc 23779}
Probab=31.80 E-value=90 Score=27.66 Aligned_cols=115 Identities=10% Similarity=0.121 Sum_probs=0.0
Q ss_pred CCCCCCHHHHHhcCC-----CceeEEEccccC-hHHHHHHHHHHHHcCCcEEEEeecCCCCCCchhhhhccCCCC--Ccc
Q 025657 111 SWATSSVEEVSSTGP-----GIRFFQLYVTKH-RNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLP--PHL 182 (249)
Q Consensus 111 s~ss~sleeia~~~~-----~~~wfQlY~~~d-~~~~~~li~rA~~aG~~alvvTvD~p~~g~Re~d~r~~~~~p--~~~ 182 (249)
+.+..+.|++++... +..-|++-+-.+ .+...+.++..+++--. +-+.||+.. ++...+...-...- ..+
T Consensus 138 ~~~~~~~e~~~~~a~~~~~~G~~~iK~Kvg~~~~~~d~~~v~avr~~~~~-~~l~vDaN~-~~~~~~A~~~~~~L~~~~~ 215 (365)
T 3ik4_A 138 TITAGDEVHAAASAKAILARGIKSIKVKTAGVDVAYDLARLRAIHQAAPT-APLIVDGNC-GYDVERALAFCAACKAESI 215 (365)
T ss_dssp EECCSCHHHHHHHHHHHHHTTCCCEEEECCSSCHHHHHHHHHHHHHHSSS-CCEEEECTT-CCCHHHHHHHHHHHHHTTC
T ss_pred EecCCCHHHHHHHHHHHHHcCCCEEEEEeCCCCHHHHHHHHHHHHHhCCC-CeEEEECCC-CCCHHHHHHHHHHHhhCCC
Q ss_pred ccccccccccCCCCCCCCchhhhHhhhhcCCCCCHHHHHHHHHhCCCCEEEEc--cCCHHHHHHHhhCC
Q 025657 183 TLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTITSLPILVKG--VLTAEDGSKLLSKE 249 (249)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tW~dl~wlr~~~~lPivlKG--Il~~eDA~~A~~~~ 249 (249)
.+.-+...- +.-+|+.+++|++.++.||.. | +.+++|++.+++.|
T Consensus 216 ~i~~iEeP~---------------------~~~d~~~~~~l~~~~~ipIa~-dE~~~~~~~~~~~i~~~ 262 (365)
T 3ik4_A 216 PMVLFEQPL---------------------PREDWAGMAQVTAQSGFAVAA-DESARSAHDVLRIAREG 262 (365)
T ss_dssp CEEEEECCS---------------------CTTCHHHHHHHHHHSSSCEEE-STTCSSHHHHHHHHHHT
T ss_pred CceEEECCC---------------------CcccHHHHHHHHhhCCCCEEE-CCCCCCHHHHHHHHHhC
No 280
>3pm6_A Putative fructose-bisphosphate aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.20A {Coccidioides immitis}
Probab=31.54 E-value=27 Score=30.97 Aligned_cols=38 Identities=13% Similarity=0.239 Sum_probs=31.5
Q ss_pred CCCCCHHHHHHHHHhC--CCCEEEEccC--CHHHHHHHhhCC
Q 025657 212 DRSLNWKDVKWLQTIT--SLPILVKGVL--TAEDGSKLLSKE 249 (249)
Q Consensus 212 ~~~~tW~dl~wlr~~~--~lPivlKGIl--~~eDA~~A~~~~ 249 (249)
.|.|+++-|+.|++.. +.|||+=|-. ..|+-++|+++|
T Consensus 203 ~p~Ld~~~L~~I~~~v~~~vpLVlHGgSG~p~e~i~~ai~~G 244 (306)
T 3pm6_A 203 GVQLDYERLQRINEAVGERVGLVLHGADPFTKEIFEKCIERG 244 (306)
T ss_dssp CCCCCHHHHHHHHHHHTTTSEEEECSCTTCCHHHHHHHHHTT
T ss_pred CCccCHHHHHHHHHHhCCCCCEEeeCCCCCCHHHHHHHHHcC
Confidence 3789999999999997 6999999864 456778888776
No 281
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=31.46 E-value=1.7e+02 Score=25.11 Aligned_cols=84 Identities=17% Similarity=0.099 Sum_probs=49.6
Q ss_pred cceeeccccccccCCChhhHHHHHHHHhcCCcEE--ecCCC---CCCHHHHH-------hcCCC---ceeEEEccccChH
Q 025657 75 MPIMIAPTAFQKMAHPEGECATARAASAAGTIMT--LSSWA---TSSVEEVS-------STGPG---IRFFQLYVTKHRN 139 (249)
Q Consensus 75 ~Pi~iaP~g~~~l~h~~gE~~~AraA~~~gi~~~--lss~s---s~sleeia-------~~~~~---~~wfQlY~~~d~~ 139 (249)
.|.++.|+ -.+-++.++=..+.+---+.|+--+ .||.+ +.|.||-. +...+ +.+...- ..+-.
T Consensus 13 ~~a~vTPf-~dg~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g~rvpviaGvg-~~~t~ 90 (301)
T 3m5v_A 13 MTALITPF-KNGKVDEQSYARLIKRQIENGIDAVVPVGTTGESATLTHEEHRTCIEIAVETCKGTKVKVLAGAG-SNATH 90 (301)
T ss_dssp EEECCCCE-ETTEECHHHHHHHHHHHHHTTCCEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEECC-CSSHH
T ss_pred eEeeecCc-CCCCCCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCCeEEEeCC-CCCHH
Confidence 34556666 4443455555567777777787443 44433 33555432 22222 4455542 23556
Q ss_pred HHHHHHHHHHHcCCcEEEEee
Q 025657 140 VDAQLVKRAERAGFKAIALTV 160 (249)
Q Consensus 140 ~~~~li~rA~~aG~~alvvTv 160 (249)
.+.++.++|+++|+.++++..
T Consensus 91 ~ai~la~~a~~~Gadavlv~~ 111 (301)
T 3m5v_A 91 EAVGLAKFAKEHGADGILSVA 111 (301)
T ss_dssp HHHHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHHHHcCCCEEEEcC
Confidence 777899999999999998873
No 282
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=31.41 E-value=49 Score=29.46 Aligned_cols=37 Identities=14% Similarity=0.180 Sum_probs=31.3
Q ss_pred CCCCHHHHHHHHHhCCCCEEEEc-cCCHHHHHHHhhCC
Q 025657 213 RSLNWKDVKWLQTITSLPILVKG-VLTAEDGSKLLSKE 249 (249)
Q Consensus 213 ~~~tW~dl~wlr~~~~lPivlKG-Il~~eDA~~A~~~~ 249 (249)
+.-+|+.++.|++.++.||+.=| |.+++|++++++.|
T Consensus 226 ~~~~~~~~~~l~~~~~iPI~~de~i~~~~~~~~~i~~~ 263 (384)
T 2pgw_A 226 VSWSIPAMAHVREKVGIPIVADQAAFTLYDVYEICRQR 263 (384)
T ss_dssp CTTCHHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHTT
T ss_pred ChhhHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHcC
Confidence 34589999999999999999876 55899999988754
No 283
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=31.33 E-value=1.2e+02 Score=26.26 Aligned_cols=83 Identities=16% Similarity=0.033 Sum_probs=45.2
Q ss_pred cceeeccccc-cccCCChhhHHHHHHHHhcCCcEEe--cCC---CCCCHHHH-------HhcCC--CceeEEEccccChH
Q 025657 75 MPIMIAPTAF-QKMAHPEGECATARAASAAGTIMTL--SSW---ATSSVEEV-------SSTGP--GIRFFQLYVTKHRN 139 (249)
Q Consensus 75 ~Pi~iaP~g~-~~l~h~~gE~~~AraA~~~gi~~~l--ss~---ss~sleei-------a~~~~--~~~wfQlY~~~d~~ 139 (249)
.|.++.|+.- .+-++.++=..+++---+.|+--++ ||. .+.|.||= .+... -+.+...- .+-.
T Consensus 16 ~~a~vTPf~~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~v~~~~grvpViaGvg--~~t~ 93 (316)
T 3e96_A 16 SGIPITPFRKSDGSIDWHHYKETVDRIVDNGIDVIVPCGNTSEFYALSLEEAKEEVRRTVEYVHGRALVVAGIG--YATS 93 (316)
T ss_dssp EECCCCCBCTTTCCBCHHHHHHHHHHHHTTTCCEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEEC--SSHH
T ss_pred EEeeeCCccCCCCCCCHHHHHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEEeC--cCHH
Confidence 3455566543 3333444444666666667764433 332 23344432 12212 34556653 2666
Q ss_pred HHHHHHHHHHHcCCcEEEEe
Q 025657 140 VDAQLVKRAERAGFKAIALT 159 (249)
Q Consensus 140 ~~~~li~rA~~aG~~alvvT 159 (249)
.+.++.++|+++|+.++++.
T Consensus 94 ~ai~la~~A~~~Gadavlv~ 113 (316)
T 3e96_A 94 TAIELGNAAKAAGADAVMIH 113 (316)
T ss_dssp HHHHHHHHHHHHTCSEEEEC
T ss_pred HHHHHHHHHHhcCCCEEEEc
Confidence 67778888888888888775
No 284
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=31.24 E-value=1.7e+02 Score=24.87 Aligned_cols=81 Identities=14% Similarity=0.165 Sum_probs=47.5
Q ss_pred eeEEEccc-cCh--HHHHHHHHHHHHcCCcEEEEeecCCCCCCchhhhhccCCCCCccccccccccccCCCCCCCCchhh
Q 025657 128 RFFQLYVT-KHR--NVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLA 204 (249)
Q Consensus 128 ~wfQlY~~-~d~--~~~~~li~rA~~aG~~alvvTvD~p~~g~Re~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (249)
.-|=.|+. .|+ +.+.++++..+++|+..|=+. .|. +-| ...+ .-+.
T Consensus 18 ~ali~yi~aGdP~~~~~~~~~~~l~~~GaD~iElg--iPf------------SDP------~aDG-----------p~Iq 66 (267)
T 3vnd_A 18 GAFVPFVTIGDPSPELSLKIIQTLVDNGADALELG--FPF------------SDP------LADG-----------PVIQ 66 (267)
T ss_dssp CEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEE--CCC------------SCC------TTCC-----------HHHH
T ss_pred CeEEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEC--CCC------------CCC------CCCC-----------HHHH
Confidence 34445553 444 889999999999999887443 222 222 0111 1111
Q ss_pred hHhhhhcCCCCC----HHHHHHHHHh-CCCCEEEEccCCH
Q 025657 205 SYVANQIDRSLN----WKDVKWLQTI-TSLPILVKGVLTA 239 (249)
Q Consensus 205 ~~~~~~~~~~~t----W~dl~wlr~~-~~lPivlKGIl~~ 239 (249)
......+....+ ++.++.+|+. .+.|+++-|-.+|
T Consensus 67 ~a~~~AL~~G~~~~~~~~~v~~ir~~~~~~Pivlm~Y~np 106 (267)
T 3vnd_A 67 GANLRSLAAGTTSSDCFDIITKVRAQHPDMPIGLLLYANL 106 (267)
T ss_dssp HHHHHHHHTTCCHHHHHHHHHHHHHHCTTCCEEEEECHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEecCcH
Confidence 111111112233 4668888987 8999999998776
No 285
>2isw_A Putative fructose-1,6-bisphosphate aldolase; class II fructose-1,6-bisphosphate aldolase, glycolytic pathway, giardia lamblia, drug target; HET: PGH; 1.75A {Giardia intestinalis} PDB: 2isv_A* 3ohi_A* 3gay_A* 3gak_A* 3gb6_A*
Probab=31.15 E-value=23 Score=31.61 Aligned_cols=62 Identities=15% Similarity=0.057 Sum_probs=37.0
Q ss_pred HHHHHHHHhcCCcEEecCCCC----CCHHHH-------Hhc-CCCceeEEEccccChHHHHHHHHHHHHcCCcEEEEe
Q 025657 94 CATARAASAAGTIMTLSSWAT----SSVEEV-------SST-GPGIRFFQLYVTKHRNVDAQLVKRAERAGFKAIALT 159 (249)
Q Consensus 94 ~~~AraA~~~gi~~~lss~ss----~sleei-------a~~-~~~~~wfQlY~~~d~~~~~~li~rA~~aG~~alvvT 159 (249)
.++.+||++.+.|.+|..... ...+.+ ++. ..-|..++| |.....+++.+|-++||+.++++
T Consensus 32 ~Ail~AAee~~sPvIlq~s~g~~~y~g~~~~~~~v~~aa~~~~~VPValHl----DHg~~~e~i~~ai~~GFtSVMiD 105 (323)
T 2isw_A 32 QGIMKAVVQLKSPVILQCSRGALKYSDMIYLKKLCEAALEKHPDIPICIHL----DHGDTLESVKMAIDLGFSSVMID 105 (323)
T ss_dssp HHHHHHHHHTTCCEEEEEEHHHHHHTTTHHHHHHHHHHHHHCTTSCEEEEE----EEECSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHHhCCCEEEECChhHHHhCCHHHHHHHHHHHHHhcCCCcEEEEC----CCCCCHHHHHHHHHcCCCeEEec
Confidence 377888888888887743211 111211 111 223455666 77666777888888888887543
No 286
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=30.93 E-value=1.5e+02 Score=26.44 Aligned_cols=29 Identities=14% Similarity=0.040 Sum_probs=23.4
Q ss_pred HHHHHHHhcCCcEEecCCCCCCHHHHHhc
Q 025657 95 ATARAASAAGTIMTLSSWATSSVEEVSST 123 (249)
Q Consensus 95 ~~AraA~~~gi~~~lss~ss~sleeia~~ 123 (249)
.+-+.+++.|.|+.+|+.-+.+++|+..+
T Consensus 204 ~LL~~va~~~kPVilk~G~~~tl~ei~~A 232 (350)
T 1vr6_A 204 RLLSKAGSYNKPVLLKRGFMNTIEEFLLS 232 (350)
T ss_dssp HHHHHHHTTCSCEEEECCTTCCHHHHHHH
T ss_pred HHHHHHHccCCcEEEcCCCCCCHHHHHHH
Confidence 56777778899999998888888888754
No 287
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=30.82 E-value=76 Score=26.93 Aligned_cols=36 Identities=6% Similarity=0.019 Sum_probs=29.7
Q ss_pred CCCHHHHHHHHHhC-----CCCEEEEccCCHHHHHHHhhCC
Q 025657 214 SLNWKDVKWLQTIT-----SLPILVKGVLTAEDGSKLLSKE 249 (249)
Q Consensus 214 ~~tW~dl~wlr~~~-----~lPivlKGIl~~eDA~~A~~~~ 249 (249)
+-+++.|+++|+.. +.+|.|=|=.++|.+..++++|
T Consensus 176 ~~~l~KI~~lr~~~~~~~~~~~I~VDGGI~~~ti~~~~~aG 216 (246)
T 3inp_A 176 PAMLDKAKEISKWISSTDRDILLEIDGGVNPYNIAEIAVCG 216 (246)
T ss_dssp TTHHHHHHHHHHHHHHHTSCCEEEEESSCCTTTHHHHHTTT
T ss_pred hHHHHHHHHHHHHHHhcCCCeeEEEECCcCHHHHHHHHHcC
Confidence 44678888888763 4789888888899999999987
No 288
>1rvg_A Fructose-1,6-bisphosphate aldolase; class II aldolase, metal-depdendent aldolase, lyase; 2.00A {Thermus aquaticus} SCOP: c.1.10.2 PDB: 1rv8_A 2fjk_A*
Probab=30.47 E-value=26 Score=31.07 Aligned_cols=22 Identities=32% Similarity=0.471 Sum_probs=12.8
Q ss_pred ChHHHHHHHHHHHHcCCcEEEE
Q 025657 137 HRNVDAQLVKRAERAGFKAIAL 158 (249)
Q Consensus 137 d~~~~~~li~rA~~aG~~alvv 158 (249)
|.....+.+.+|-++||..+++
T Consensus 80 DHg~~~e~~~~ai~~GFtSVMi 101 (305)
T 1rvg_A 80 DHGSSYESVLRALRAGFTSVMI 101 (305)
T ss_dssp EEECSHHHHHHHHHTTCSEEEE
T ss_pred CCCCCHHHHHHHHHcCCCeeee
Confidence 5544556666666666666543
No 289
>3fs2_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, bruciellla melitensis, DAHP synthetase I, cytoplasm, lipopolysaccharide biosynthesis; HET: PG4; 1.85A {Brucella melitensis}
Probab=30.13 E-value=55 Score=28.80 Aligned_cols=69 Identities=13% Similarity=0.076 Sum_probs=42.3
Q ss_pred cccccCCChhhHHHHHHHHhcCCcEEecCCCCCCHHHHHhcCCCceeEEEccccChHHHHHHHHHHHHcCCcEE
Q 025657 83 AFQKMAHPEGECATARAASAAGTIMTLSSWATSSVEEVSSTGPGIRFFQLYVTKHRNVDAQLVKRAERAGFKAI 156 (249)
Q Consensus 83 g~~~l~h~~gE~~~AraA~~~gi~~~lss~ss~sleeia~~~~~~~wfQlY~~~d~~~~~~li~rA~~aG~~al 156 (249)
+++++.-.+|=..+.+.+.+.|+++...-+...+++.+++. ..|+|+=-..-+ +.++++.+.+.|...+
T Consensus 91 sf~Glg~~~GL~~L~~~~~e~GLpv~Tev~D~~~v~~l~~~---vd~lkIgA~~~~--n~~LLr~va~~gkPVi 159 (298)
T 3fs2_A 91 AARGIGLEKALEVFSDLKKEYGFPVLTDIHTEEQCAAVAPV---VDVLQIPAFLCR--QTDLLIAAARTGRVVN 159 (298)
T ss_dssp ----CCHHHHHHHHHHHHHHHCCCEEEECCSHHHHHHHTTT---CSEEEECGGGTT--CHHHHHHHHHTTSEEE
T ss_pred CcCCcCHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHhh---CCEEEECccccC--CHHHHHHHHccCCcEE
Confidence 44554213454578999999999999877766666666554 359998332212 2357777777776544
No 290
>3no3_A Glycerophosphodiester phosphodiesterase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.89A {Parabacteroides distasonis} SCOP: c.1.18.0
Probab=30.12 E-value=46 Score=27.61 Aligned_cols=69 Identities=17% Similarity=0.150 Sum_probs=41.0
Q ss_pred HHHHHHHhcCC--cEEecCCCCCCHHHHHhcCCCceeEEEccc---------------cChH---HHHHHHHHHHHcCCc
Q 025657 95 ATARAASAAGT--IMTLSSWATSSVEEVSSTGPGIRFFQLYVT---------------KHRN---VDAQLVKRAERAGFK 154 (249)
Q Consensus 95 ~~AraA~~~gi--~~~lss~ss~sleeia~~~~~~~wfQlY~~---------------~d~~---~~~~li~rA~~aG~~ 154 (249)
.+.+..++.|. ..+++|+....++.+.+..|...-..|+-. -+.. .+.+++++++++|.+
T Consensus 119 ~v~~~l~~~~~~~~v~~~Sf~~~~l~~~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~G~~ 198 (238)
T 3no3_A 119 LSVQMVKRMKLAKRTDYISFNMDACKEFIRLCPKSEVSYLNGELSPMELKELGFTGLDYHYKVLQSHPDWVKDCKVLGMT 198 (238)
T ss_dssp HHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCTTSCEEECSSCSCHHHHHHTTCCEEEEEHHHHHHSTTHHHHHHHTTCE
T ss_pred HHHHHHHHcCCcCCEEEEECCHHHHHHHHHHCCCCeEEEEeCCCCHHHHHHCCCceEeccHHhhhCCHHHHHHHHHCCCE
Confidence 45555566655 356677766666666665553221111110 0111 134788999999999
Q ss_pred EEEEeecCC
Q 025657 155 AIALTVDTP 163 (249)
Q Consensus 155 alvvTvD~p 163 (249)
..+.|||.+
T Consensus 199 v~~WTVn~~ 207 (238)
T 3no3_A 199 SNVWTVDDP 207 (238)
T ss_dssp EEEECCCSH
T ss_pred EEEECCCCH
Confidence 999999864
No 291
>2uv8_G Fatty acid synthase subunit beta (FAS1); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_G* 3hmj_G*
Probab=29.86 E-value=1.2e+02 Score=33.65 Aligned_cols=104 Identities=18% Similarity=0.285 Sum_probs=61.8
Q ss_pred eeccccCCCC-C--Cccc-eeecCcccccceeeccccccccCCChhhHHHHHHHHhcCCcEEecCCCCCCHHHHHh----
Q 025657 51 FRPRILRDVS-K--IDMT-TTVLGFNISMPIMIAPTAFQKMAHPEGECATARAASAAGTIMTLSSWATSSVEEVSS---- 122 (249)
Q Consensus 51 l~pr~l~~v~-~--~d~s-t~llG~~~~~Pi~iaP~g~~~l~h~~gE~~~AraA~~~gi~~~lss~ss~sleeia~---- 122 (249)
|.||+.+--+ . .+|. |++||+ .||+.+||+.. -..-.++.|+.++|-.-+|...+..+.|++.+
T Consensus 565 f~PrLv~~~~g~~~~~t~~t~llg~---~PIi~~gM~~~-----~~~~~lvaAvsnAGglg~l~~~~~~~~e~l~~~I~~ 636 (2051)
T 2uv8_G 565 YHPKLIKNKSGKIFVETKFSKLIGR---PPLLVPGMTPC-----TVSPDFVAATTNAGYTIELAGGGYFSAAGMTAAIDS 636 (2051)
T ss_dssp TCCEEEECSSCCEEEECHHHHHHSS---CSEEECCCHHH-----HTCHHHHHHHHHTTCEEEEEGGGCCSHHHHHHHHHH
T ss_pred cCCccccCCCCchhHHHHHHHhhCc---cceecCCCccc-----cccHHHHHHHHcCCcEEEEccCCCCCHHHHHHHHHH
Confidence 5677765222 1 2343 568993 69999998722 12456788899999888885555566665532
Q ss_pred ---cCC-C-ceeEEE-ccccC-hHHHHHHHHHHHHcCCcEEEEeecC
Q 025657 123 ---TGP-G-IRFFQL-YVTKH-RNVDAQLVKRAERAGFKAIALTVDT 162 (249)
Q Consensus 123 ---~~~-~-~~wfQl-Y~~~d-~~~~~~li~rA~~aG~~alvvTvD~ 162 (249)
... + +.=+-+ |+..+ .....++++.+.+.|++.-.|++-.
T Consensus 637 ~~~~t~~~~~~gvN~~~~~~~~~~~~~~~~~~~~~~gv~i~~v~~~a 683 (2051)
T 2uv8_G 637 VVSQIEKGSTFGINLIYVNPFMLQWGIPLIKELRSKGYPIQFLTIGA 683 (2051)
T ss_dssp HHHHSCTTCCEEEEEETTCTTHHHHHHHHHHHHHHTTCSEEEEEEES
T ss_pred HHHhcCCCCceEEEEeecChhhhhhhHHHHHHHHHcCCCcceEEecC
Confidence 122 1 222333 33222 1112288999999999995555543
No 292
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=29.54 E-value=46 Score=26.97 Aligned_cols=86 Identities=9% Similarity=0.069 Sum_probs=53.1
Q ss_pred ceeecCcccccceeeccccccccCCChhhHHHHHHHHhcCCcEEecCCC-CCCHHHHHhcCCCceeEEEccccChHHHHH
Q 025657 65 TTTVLGFNISMPIMIAPTAFQKMAHPEGECATARAASAAGTIMTLSSWA-TSSVEEVSSTGPGIRFFQLYVTKHRNVDAQ 143 (249)
Q Consensus 65 st~llG~~~~~Pi~iaP~g~~~l~h~~gE~~~AraA~~~gi~~~lss~s-s~sleeia~~~~~~~wfQlY~~~d~~~~~~ 143 (249)
+..++-+.++.|+.-=|+++.-+ =.++.++-+..+-.-+++-.+ ...++.+....+- =++.|...+.+..++
T Consensus 61 ta~~lr~~~~iPVV~I~~s~~Di-----l~al~~a~~~~~kIavvg~~~~~~~~~~~~~ll~~--~i~~~~~~~~~e~~~ 133 (196)
T 2q5c_A 61 TSDYIKKSVSIPSISIKVTRFDT-----MRAVYNAKRFGNELALIAYKHSIVDKHEIEAMLGV--KIKEFLFSSEDEITT 133 (196)
T ss_dssp HHHHHHTTCSSCEEEECCCHHHH-----HHHHHHHGGGCSEEEEEEESSCSSCHHHHHHHHTC--EEEEEEECSGGGHHH
T ss_pred HHHHHHHhCCCCEEEEcCCHhHH-----HHHHHHHHhhCCcEEEEeCcchhhHHHHHHHHhCC--ceEEEEeCCHHHHHH
Confidence 34556667889988666443211 125555544333233343332 3356666665441 255677788988999
Q ss_pred HHHHHHHcCCcEEE
Q 025657 144 LVKRAERAGFKAIA 157 (249)
Q Consensus 144 li~rA~~aG~~alv 157 (249)
.++++++.|++++|
T Consensus 134 ~i~~l~~~G~~vvV 147 (196)
T 2q5c_A 134 LISKVKTENIKIVV 147 (196)
T ss_dssp HHHHHHHTTCCEEE
T ss_pred HHHHHHHCCCeEEE
Confidence 99999999999976
No 293
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=29.30 E-value=39 Score=27.99 Aligned_cols=31 Identities=16% Similarity=0.143 Sum_probs=22.1
Q ss_pred HHHHHHHHhCCCCEEEEcc-----CCHHH----HHHHhhCC
Q 025657 218 KDVKWLQTITSLPILVKGV-----LTAED----GSKLLSKE 249 (249)
Q Consensus 218 ~dl~wlr~~~~lPivlKGI-----l~~eD----A~~A~~~~ 249 (249)
++++.+++..+ |+++|-| ++.|+ |+.|.++|
T Consensus 106 ~~i~~v~~a~~-pv~vKvi~e~~~l~~~~~~~~a~~a~eaG 145 (225)
T 1mzh_A 106 EELKEIFRETP-SAVHKVIVETPYLNEEEIKKAVEICIEAG 145 (225)
T ss_dssp HHHHHHHHTCT-TSEEEEECCGGGCCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhc-CceEEEEEeCCCCCHHHHHHHHHHHHHhC
Confidence 56888999888 9999986 55655 45555544
No 294
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=28.74 E-value=63 Score=28.36 Aligned_cols=36 Identities=19% Similarity=0.231 Sum_probs=30.7
Q ss_pred CCCHHHHHHHHHhCCCCEEEEc-cCCHHHHHHHhhCC
Q 025657 214 SLNWKDVKWLQTITSLPILVKG-VLTAEDGSKLLSKE 249 (249)
Q Consensus 214 ~~tW~dl~wlr~~~~lPivlKG-Il~~eDA~~A~~~~ 249 (249)
.-+|+.++.|++.++.||+.=+ +.+++|++.+++.|
T Consensus 226 ~~~~~~~~~l~~~~~iPI~~de~~~~~~~~~~~i~~~ 262 (359)
T 1mdl_A 226 QHDYEGHQRIQSKLNVPVQMGENWLGPEEMFKALSIG 262 (359)
T ss_dssp TTCHHHHHHHHHTCSSCEEECTTCCSHHHHHHHHHTT
T ss_pred hhhHHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHcC
Confidence 4589999999999999999876 56899999988754
No 295
>3c8f_A Pyruvate formate-lyase 1-activating enzyme; adoMet radical, SAM radical, activase, glycyl radical, 4Fe- 4S, carbohydrate metabolism, cytoplasm; HET: MT2 PGE; 2.25A {Escherichia coli} PDB: 3cb8_A*
Probab=28.60 E-value=2e+02 Score=22.63 Aligned_cols=82 Identities=12% Similarity=-0.013 Sum_probs=46.6
Q ss_pred cccccCCChhhHHHHHHHHhcCCcEEecCCCCC--CHHHHHhcCCCceeEEEcccc-Ch-----------HHHHHHHHHH
Q 025657 83 AFQKMAHPEGECATARAASAAGTIMTLSSWATS--SVEEVSSTGPGIRFFQLYVTK-HR-----------NVDAQLVKRA 148 (249)
Q Consensus 83 g~~~l~h~~gE~~~AraA~~~gi~~~lss~ss~--sleeia~~~~~~~wfQlY~~~-d~-----------~~~~~li~rA 148 (249)
|+--+.|++-=..+.+.+.+.|+.+.+.|.++. +.+.+.+......++++-+.. +. +.+.+-++++
T Consensus 77 GGEP~l~~~~l~~l~~~~~~~~~~i~i~Tng~~~~~~~~~~~l~~~~~~v~isld~~~~~~~~~~~~~~~~~~~~~i~~l 156 (245)
T 3c8f_A 77 GGEAILQAEFVRDWFRACKKEGIHTCLDTNGFVRRYDPVIDELLEVTDLVMLDLKQMNDEIHQNLVGVSNHRTLEFAKYL 156 (245)
T ss_dssp ESCGGGGHHHHHHHHHHHHTTTCCEEEEECCCCCCCCHHHHHHHHTCSEEEEECCCSSHHHHHHHHSSCSHHHHHHHHHH
T ss_pred CCCcCCCHHHHHHHHHHHHHcCCcEEEEeCCCcCcCHHHHHHHHHhCCEEEEeCCCCCHHHhhhccCCCHHHHHHHHHHH
Confidence 333355664224788888888999888887765 444443211112245554433 22 3455677888
Q ss_pred HHcCCcEEEEeecCCC
Q 025657 149 ERAGFKAIALTVDTPR 164 (249)
Q Consensus 149 ~~aG~~alvvTvD~p~ 164 (249)
.++|.+..+-++=.+.
T Consensus 157 ~~~g~~v~i~~~~~~g 172 (245)
T 3c8f_A 157 ANKNVKVWIRYVVVPG 172 (245)
T ss_dssp HHHTCCEEEEEEECTT
T ss_pred HhcCCEEEEEEeecCC
Confidence 8899875443332443
No 296
>3n9r_A Fructose-bisphosphate aldolase; FBP aldolase, class II, inhibitor, lyase; HET: TD3; 1.80A {Helicobacter pylori} SCOP: c.1.10.0 PDB: 3c52_A* 3c56_A* 3c4u_A* 3n9s_A*
Probab=28.56 E-value=23 Score=31.40 Aligned_cols=60 Identities=12% Similarity=0.155 Sum_probs=30.4
Q ss_pred HHHHHHHhcCCcEEecCCCC----CCHHHH-------Hhc-CCCceeEEEccccChHHHHHHHHHHHHcCCcEEEE
Q 025657 95 ATARAASAAGTIMTLSSWAT----SSVEEV-------SST-GPGIRFFQLYVTKHRNVDAQLVKRAERAGFKAIAL 158 (249)
Q Consensus 95 ~~AraA~~~gi~~~lss~ss----~sleei-------a~~-~~~~~wfQlY~~~d~~~~~~li~rA~~aG~~alvv 158 (249)
++.+||++.+.|.+|...-. ...+-+ ++. ..-|..++| |.....+.+.+|-++||+.+++
T Consensus 32 avi~AAee~~sPvIlq~s~g~~~y~g~~~~~~~v~~aa~~~~~VPValHL----DHg~~~e~~~~ai~~GFtSVMi 103 (307)
T 3n9r_A 32 AIFEAGNEENSPLFIQASEGAIKYMGIDMAVGMVKIMCERYPHIPVALHL----DHGTTFESCEKAVKAGFTSVMI 103 (307)
T ss_dssp HHHHHHHHHTCCEEEEEEHHHHHHHCHHHHHHHHHHHHHHSTTSCEEEEE----EEECSHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHhCCCEEEEcChhhhhhCCHHHHHHHHHHHHHhcCCCcEEEEC----CCCCCHHHHHHHHHhCCCcEEE
Confidence 66666677776666542110 111111 111 123445555 5555556666666777776654
No 297
>1viz_A PCRB protein homolog; structural genomics, unknown function; 1.85A {Bacillus subtilis} SCOP: c.1.4.1
Probab=28.55 E-value=41 Score=28.52 Aligned_cols=25 Identities=8% Similarity=0.166 Sum_probs=20.9
Q ss_pred cChHHHHHHHHHHHHcCCcEEEEee
Q 025657 136 KHRNVDAQLVKRAERAGFKAIALTV 160 (249)
Q Consensus 136 ~d~~~~~~li~rA~~aG~~alvvTv 160 (249)
.|.+.+.++++...++|+.+|.+.+
T Consensus 17 P~~~~t~~~~~~l~~~GaD~ielG~ 41 (240)
T 1viz_A 17 PNKDLPDEQLEILCESGTDAVIIGG 41 (240)
T ss_dssp TTSCCCHHHHHHHHTSCCSEEEECC
T ss_pred CCccccHHHHHHHHHcCCCEEEECC
Confidence 3555677888999999999999988
No 298
>2l82_A Designed protein OR32; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}
Probab=28.51 E-value=35 Score=25.93 Aligned_cols=31 Identities=16% Similarity=0.363 Sum_probs=25.9
Q ss_pred cccChHHHHHHHHHHHHcCCcEEEEeecCCC
Q 025657 134 VTKHRNVDAQLVKRAERAGFKAIALTVDTPR 164 (249)
Q Consensus 134 ~~~d~~~~~~li~rA~~aG~~alvvTvD~p~ 164 (249)
+..|+++.+++++..+..|...+.+--|..-
T Consensus 8 fssdpeilkeivreikrqgvrvvllysdqde 38 (162)
T 2l82_A 8 FSSDPEILKEIVREIKRQGVRVVLLYSDQDE 38 (162)
T ss_dssp EESCHHHHHHHHHHHHHTTCEEEEEECCSCH
T ss_pred ecCCHHHHHHHHHHHHhCCeEEEEEecCchH
Confidence 3678999999999999999999888888544
No 299
>3sho_A Transcriptional regulator, RPIR family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.80A {Sphaerobacter thermophilus}
Probab=28.05 E-value=1.8e+02 Score=22.31 Aligned_cols=61 Identities=16% Similarity=0.133 Sum_probs=39.1
Q ss_pred HhcCCcEEecCCCCCCHH-HHHhcCCCceeEEEccccChHHHHHHHHHHHHcCCcEEEEeec
Q 025657 101 SAAGTIMTLSSWATSSVE-EVSSTGPGIRFFQLYVTKHRNVDAQLVKRAERAGFKAIALTVD 161 (249)
Q Consensus 101 ~~~gi~~~lss~ss~sle-eia~~~~~~~wfQlY~~~d~~~~~~li~rA~~aG~~alvvTvD 161 (249)
...|.+..+-+.....+. .+....++...+=+-..+.-..+.+.++.|++.|++.|.+|=.
T Consensus 62 ~~~g~~~~~~~~~~~~~~~~~~~~~~~d~~i~iS~sG~t~~~~~~~~~ak~~g~~vi~IT~~ 123 (187)
T 3sho_A 62 NSLGIRTTVLTEGGSTLTITLANLRPTDLMIGVSVWRYLRDTVAALAGAAERGVPTMALTDS 123 (187)
T ss_dssp HHTTCCEEEECCCTHHHHHHHHTCCTTEEEEEECCSSCCHHHHHHHHHHHHTTCCEEEEESC
T ss_pred HhcCCCEEEecCCchhHHHHHhcCCCCCEEEEEeCCCCCHHHHHHHHHHHHCCCCEEEEeCC
Confidence 457887765542222222 2223344445554555666667889999999999999999964
No 300
>1m65_A Hypothetical protein YCDX; structural genomics, beta-alpha-barrel, metallo-enzyme, STRU function project, S2F, unknown function; 1.57A {Escherichia coli} SCOP: c.6.3.1 PDB: 1m68_A 1pb0_A
Probab=27.99 E-value=38 Score=27.60 Aligned_cols=23 Identities=26% Similarity=0.424 Sum_probs=19.2
Q ss_pred HHHHHHHHHHcCCcEEEEeecCC
Q 025657 141 DAQLVKRAERAGFKAIALTVDTP 163 (249)
Q Consensus 141 ~~~li~rA~~aG~~alvvTvD~p 163 (249)
.++++++|++.|+++|++|==.+
T Consensus 20 ~~e~v~~A~~~Gl~~iaiTDH~~ 42 (245)
T 1m65_A 20 LSDYIAQAKQKGIKLFAITDHGP 42 (245)
T ss_dssp HHHHHHHHHHHTCCEEEEEEECT
T ss_pred HHHHHHHHHHCCCCEEEECCCCC
Confidence 45999999999999999985333
No 301
>1vky_A S-adenosylmethionine:tRNA ribosyltransferase-ISOM; TM0574, struct genomics, JCSG, protein structure initiative, PSI; 2.00A {Thermotoga maritima} SCOP: e.53.1.1
Probab=27.93 E-value=1.2e+02 Score=27.30 Aligned_cols=72 Identities=21% Similarity=0.268 Sum_probs=33.6
Q ss_pred eccccccccCCChhhHHHHHHHHhcCCcE-------EecCCCCCCHHHHHhcCCCceeEEEccccChHHHHHHHHHHHHc
Q 025657 79 IAPTAFQKMAHPEGECATARAASAAGTIM-------TLSSWATSSVEEVSSTGPGIRFFQLYVTKHRNVDAQLVKRAERA 151 (249)
Q Consensus 79 iaP~g~~~l~h~~gE~~~AraA~~~gi~~-------~lss~ss~sleeia~~~~~~~wfQlY~~~d~~~~~~li~rA~~a 151 (249)
-|||++- |=..| +-+.-++.|+-+ .+||+-....|+|.+.....-||.+ . +.+.+.|++|++.
T Consensus 183 AAPTAGL---HFt~e--LL~~L~~kGv~~a~vTLHVG~GTF~PV~~edi~~H~MHsE~~~V----~-~eta~~in~aka~ 252 (347)
T 1vky_A 183 AAPTAGL---HFTPE--LIEKLKKKGVQFAEVVLHVGIGTFRPVKVEEVEKHKMHEEFYQV----P-KETVRKLRETRER 252 (347)
T ss_dssp ---CGGG---GCCHH--HHHHHHHHTCEEEEEEEEC------------------CCCEEEE----C-HHHHHHHHHHHHH
T ss_pred ecCCCCC---CCCHH--HHHHHHHCCCcEEEEEEeecCCCCCCccccccccCCcccEEEEE----C-HHHHHHHHHHHHc
Confidence 4567655 33333 344445555543 4667766677888876555569988 3 4566899999999
Q ss_pred CCcEEEEee
Q 025657 152 GFKAIALTV 160 (249)
Q Consensus 152 G~~alvvTv 160 (249)
|-+.|.|..
T Consensus 253 G~RViAVGT 261 (347)
T 1vky_A 253 GNRIVAVGT 261 (347)
T ss_dssp TCCEEEESH
T ss_pred CCeEEEEcc
Confidence 999888753
No 302
>3obe_A Sugar phosphate isomerase/epimerase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=27.69 E-value=27 Score=29.95 Aligned_cols=35 Identities=14% Similarity=0.114 Sum_probs=27.7
Q ss_pred ceeEEEccccCh--HHHHHHHHHHHHcCCcEEEEeec
Q 025657 127 IRFFQLYVTKHR--NVDAQLVKRAERAGFKAIALTVD 161 (249)
Q Consensus 127 ~~wfQlY~~~d~--~~~~~li~rA~~aG~~alvvTvD 161 (249)
+.=+|+|..++. .-..+.+++|+++||++|=+...
T Consensus 22 ~~g~~~~s~~~~~~~~l~~~l~~aa~~G~~~VEl~~~ 58 (305)
T 3obe_A 22 KMGLQTYSLGQELLQDMPNGLNRLAKAGYTDLEIFGY 58 (305)
T ss_dssp CCEEEGGGGTHHHHTTHHHHHHHHHHHTCCEEEECCB
T ss_pred ceEEEEEEchhhhhcCHHHHHHHHHHcCCCEEEeccc
Confidence 346999998875 34668889999999999988764
No 303
>4e5t_A Mandelate racemase / muconate lactonizing enzyme, terminal domain protein; aldolase, structural genomics, biology; 2.90A {Labrenzia alexandrii}
Probab=27.62 E-value=81 Score=28.41 Aligned_cols=36 Identities=19% Similarity=0.182 Sum_probs=29.4
Q ss_pred CCCHHHHHHHHHhCCCCEEEEc-cCCHHHHHHHhhCC
Q 025657 214 SLNWKDVKWLQTITSLPILVKG-VLTAEDGSKLLSKE 249 (249)
Q Consensus 214 ~~tW~dl~wlr~~~~lPivlKG-Il~~eDA~~A~~~~ 249 (249)
.-+|+.++.||+.++.||..=+ +.+++|++.+++.|
T Consensus 245 ~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~ 281 (404)
T 4e5t_A 245 PEKPEDMAEVARYTSIPVATGERLCTKYEFSRVLETG 281 (404)
T ss_dssp TTCHHHHHHHHHHCSSCEEECTTCCHHHHHHHHHHHT
T ss_pred cccHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHhC
Confidence 3478999999999999999876 45688998887654
No 304
>2nwr_A 2-dehydro-3-deoxyphosphooctonate aldolase; KDO, KDO8P, KDO8PS, PEP, A5P, transferase; HET: PEP; 1.50A {Aquifex aeolicus} PDB: 2nws_A* 2nx1_A* 3e0i_A* 1fwn_A* 1fwt_A* 1fws_A* 1fx6_A 1fww_A 1fxq_A* 1fy6_A* 1jcx_A* 1jcy_A* 1pck_A* 1pcw_A* 1fxp_A* 2a21_A* 2a2i_A* 1pe1_A* 3e12_A* 2nx3_A* ...
Probab=27.51 E-value=1.1e+02 Score=26.19 Aligned_cols=61 Identities=18% Similarity=0.151 Sum_probs=42.2
Q ss_pred ChhhHHHHHHHHhcCCcEEecCCCCCCHHHHHhcCCCceeEEEccccChHHHHHHHHHHHHcCCcE
Q 025657 90 PEGECATARAASAAGTIMTLSSWATSSVEEVSSTGPGIRFFQLYVTKHRNVDAQLVKRAERAGFKA 155 (249)
Q Consensus 90 ~~gE~~~AraA~~~gi~~~lss~ss~sleeia~~~~~~~wfQlY~~~d~~~~~~li~rA~~aG~~a 155 (249)
.+|=..+.+.+.+.|+|++..-+...+++.+++. ..|+|+=-..-+. .++++.+.+.|...
T Consensus 61 ~~GL~~l~~~~~e~Glp~~te~~d~~~~~~l~~~---vd~~~IgA~~~rn--~~ll~~~a~~~~PV 121 (267)
T 2nwr_A 61 EYGVKALRKVKEEFGLKITTDIHESWQAEPVAEV---ADIIQIPAFLCRQ--TDLLLAAAKTGRAV 121 (267)
T ss_dssp HHHHHHHHHHHHHHCCEEEEECSSGGGHHHHHTT---CSEEEECGGGTTC--HHHHHHHHTTTSEE
T ss_pred HHHHHHHHHHHHhcCCeEEEecCCHHhHHHHHhc---CCEEEECcccccC--HHHHHHHHcCCCcE
Confidence 3455578888999999999988888888888763 3599983222222 24777765555543
No 305
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=27.36 E-value=57 Score=26.79 Aligned_cols=34 Identities=21% Similarity=0.226 Sum_probs=27.8
Q ss_pred CHHHHHHHHHhCCCCEEEE-ccCCHHHHHHHhhCC
Q 025657 216 NWKDVKWLQTITSLPILVK-GVLTAEDGSKLLSKE 249 (249)
Q Consensus 216 tW~dl~wlr~~~~lPivlK-GIl~~eDA~~A~~~~ 249 (249)
+.+.++.+++..+.||++= ||.++||+..+.++|
T Consensus 179 ~~~~i~~l~~~~~~pi~~~GGI~~~e~i~~~~~~G 213 (248)
T 1geq_A 179 AYDLLRRAKRICRNKVAVGFGVSKREHVVSLLKEG 213 (248)
T ss_dssp HHHHHHHHHHHCSSCEEEESCCCSHHHHHHHHHTT
T ss_pred HHHHHHHHHhhcCCCEEEEeecCCHHHHHHHHHcC
Confidence 3567889999999999875 677779999988776
No 306
>2yxo_A Histidinol phosphatase; metal-dependent, hydrolase; 1.60A {Thermus thermophilus} PDB: 2yz5_A 2z4g_A
Probab=27.35 E-value=43 Score=27.64 Aligned_cols=24 Identities=21% Similarity=0.407 Sum_probs=19.5
Q ss_pred HHHHHHHHHHcCCcEEEEeecCCC
Q 025657 141 DAQLVKRAERAGFKAIALTVDTPR 164 (249)
Q Consensus 141 ~~~li~rA~~aG~~alvvTvD~p~ 164 (249)
.++++++|.+.|+++|++|==.+.
T Consensus 18 ~ee~v~~A~~~Gl~~iaiTDH~~~ 41 (267)
T 2yxo_A 18 PEAYLEEARAKGLKGVVFTDHSPM 41 (267)
T ss_dssp HHHHHHHHHHTTCSEEEEEEECCC
T ss_pred HHHHHHHHHHcCCCEEEEcCCCCC
Confidence 458999999999999999854433
No 307
>3h4q_A Putative acetyltransferase; NP_371943.1, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE P33; 2.50A {Staphylococcus aureus subsp}
Probab=27.23 E-value=64 Score=24.18 Aligned_cols=49 Identities=12% Similarity=0.009 Sum_probs=32.3
Q ss_pred eEEEccccC-----hHHHHHHHHHHHHcCCcEEEEeecCCCCCCchhhhhccCC
Q 025657 129 FFQLYVTKH-----RNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFV 177 (249)
Q Consensus 129 wfQlY~~~d-----~~~~~~li~rA~~aG~~alvvTvD~p~~g~Re~d~r~~~~ 177 (249)
...+|+..+ +.++..+++.|++.|++.|.++|+....+.+.-=.|.||.
T Consensus 108 i~~l~V~p~~~Gig~~Ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~~y~k~GF~ 161 (188)
T 3h4q_A 108 IHRLTGSKEYKGAATELFNYVIDVVKARGAEVILTDTFALNKPAQGLFAKFGFH 161 (188)
T ss_dssp EEEEECCSSCTTHHHHHHHHHHHHHHHTTCCEEEEEGGGSCGGGTHHHHHTTCE
T ss_pred EEEEEECCccCcHHHHHHHHHHHHHHHcCCCEEEEEEecCCHHHHHHHHHCCCe
Confidence 345555444 3466667777888899999999987654444444566664
No 308
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=27.18 E-value=1.2e+02 Score=26.32 Aligned_cols=22 Identities=23% Similarity=0.336 Sum_probs=18.2
Q ss_pred hHHHHHHHHHHHHcCCc--EEEEe
Q 025657 138 RNVDAQLVKRAERAGFK--AIALT 159 (249)
Q Consensus 138 ~~~~~~li~rA~~aG~~--alvvT 159 (249)
.+...+.+++|+++|++ -|++.
T Consensus 162 ~~~l~~~i~~a~~~Gi~~~~IilD 185 (282)
T 1aj0_A 162 NRYFIEQIARCEQAGIAKEKLLLD 185 (282)
T ss_dssp HHHHHHHHHHHHHTTCCGGGEEEE
T ss_pred HHHHHHHHHHHHHcCCChhhEEEe
Confidence 46677888999999998 68777
No 309
>4ggj_A Mitochondrial cardiolipin hydrolase; piRNA pathway, protein-RNA interactions, piRNA RNAI, HKD MOT zinc finger, nuclease, nucleic acid binding; 1.75A {Mus musculus} PDB: 4ggk_A
Probab=27.16 E-value=1.1e+02 Score=24.57 Aligned_cols=43 Identities=9% Similarity=0.139 Sum_probs=30.1
Q ss_pred HHHHHhcCCCceeEEEccccChHHHHHHHHHHHHcCCcEEEEeecC
Q 025657 117 VEEVSSTGPGIRFFQLYVTKHRNVDAQLVKRAERAGFKAIALTVDT 162 (249)
Q Consensus 117 leeia~~~~~~~wfQlY~~~d~~~~~~li~rA~~aG~~alvvTvD~ 162 (249)
++.|.++ ....+++.|...|+++...|++ |.+-|++.=+|+ |.
T Consensus 52 l~~I~~A-~~sI~i~~y~~~~~~i~~aL~~-aa~rGV~Vrii~-D~ 94 (196)
T 4ggj_A 52 LRALLAA-RSSLELCLFAFSSPQLGRAVQL-LHQRGVRVRVIT-DC 94 (196)
T ss_dssp HHHHHTC-SSEEEEEESCBCCHHHHHHHHH-HHHTTCEEEEEE-SS
T ss_pred HHHHHHh-heEEEEEEEEeCCHHHHHHHHH-HHHcCCcEEEEE-ec
Confidence 3444433 3457899999999998877765 456799877765 64
No 310
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=26.98 E-value=1.5e+02 Score=25.90 Aligned_cols=32 Identities=9% Similarity=-0.015 Sum_probs=19.0
Q ss_pred ceeEEEccccChHHHHHHHHHHHHcCCcEEEEe
Q 025657 127 IRFFQLYVTKHRNVDAQLVKRAERAGFKAIALT 159 (249)
Q Consensus 127 ~~wfQlY~~~d~~~~~~li~rA~~aG~~alvvT 159 (249)
+.+...- ..+-..+.++.++|+++|+.++++.
T Consensus 82 pviaGvg-~~~t~~ai~la~~a~~~Gadavlv~ 113 (318)
T 3qfe_A 82 PIMAGVG-AHSTRQVLEHINDASVAGANYVLVL 113 (318)
T ss_dssp CEEEECC-CSSHHHHHHHHHHHHHHTCSEEEEC
T ss_pred cEEEeCC-CCCHHHHHHHHHHHHHcCCCEEEEe
Confidence 3444442 1244556677777777777777664
No 311
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=26.67 E-value=63 Score=26.99 Aligned_cols=136 Identities=12% Similarity=0.038 Sum_probs=72.8
Q ss_pred CChHHHHHHHHHhCChhh----hhhhccCccchHHHHHHHHhhcccceeccccCCCCCCccceeecCcccccceeecccc
Q 025657 8 TNVMEYEALAKEKLPKMV----YDYYASGAEDQWTLQENRNAFSRILFRPRILRDVSKIDMTTTVLGFNISMPIMIAPTA 83 (249)
Q Consensus 8 ~~i~d~e~~A~~~Lp~~~----~~Y~~gGa~de~t~~~N~~af~~~~l~pr~l~~v~~~d~st~llG~~~~~Pi~iaP~g 83 (249)
.+..++.+.+++..+... ...+.++-++.....++. .+.= ...++. .+--+..++-..++.|+.-=+++
T Consensus 19 ~~~~~L~~~~~~i~~e~~~~~~I~vi~~~le~av~~a~~~--~~~~--~~dVII---SRGgta~~Lr~~~~iPVV~I~vs 91 (225)
T 2pju_A 19 VSVTRLFELFRDISLEFDHLANITPIQLGFEKAVTYIRKK--LANE--RCDAII---AAGSNGAYLKSRLSVPVILIKPS 91 (225)
T ss_dssp ECCHHHHHHHHHHHTTTTTTCEEEEECCCHHHHHHHHHHH--TTTS--CCSEEE---EEHHHHHHHHTTCSSCEEEECCC
T ss_pred EchHHHHHHHHHHHHhhCCCceEEEecCcHHHHHHHHHHH--HhcC--CCeEEE---eCChHHHHHHhhCCCCEEEecCC
Confidence 456777777777776432 222334444444433332 2210 011111 11223455666788998865644
Q ss_pred ccccCCChhhHHHHHHHHhcCCcEEecCCCCC-CHHHHHhcCCCceeEEEccccChHHHHHHHHHHHHcCCcEEE
Q 025657 84 FQKMAHPEGECATARAASAAGTIMTLSSWATS-SVEEVSSTGPGIRFFQLYVTKHRNVDAQLVKRAERAGFKAIA 157 (249)
Q Consensus 84 ~~~l~h~~gE~~~AraA~~~gi~~~lss~ss~-sleeia~~~~~~~wfQlY~~~d~~~~~~li~rA~~aG~~alv 157 (249)
+.-+ =.++.++-+..+-.-+++-.+.. .++.+....+- =++.|...+.+..++.++++++.|++++|
T Consensus 92 ~~Di-----l~aL~~a~~~~~kIavVg~~~~~~~~~~i~~ll~~--~i~~~~~~~~ee~~~~i~~l~~~G~~vVV 159 (225)
T 2pju_A 92 GYDV-----LQFLAKAGKLTSSIGVVTYQETIPALVAFQKTFNL--RLDQRSYITEEDARGQINELKANGTEAVV 159 (225)
T ss_dssp HHHH-----HHHHHHTTCTTSCEEEEEESSCCHHHHHHHHHHTC--CEEEEEESSHHHHHHHHHHHHHTTCCEEE
T ss_pred HHHH-----HHHHHHHHhhCCcEEEEeCchhhhHHHHHHHHhCC--ceEEEEeCCHHHHHHHHHHHHHCCCCEEE
Confidence 3211 12455554433333344433322 34555554331 15567778999999999999999999976
No 312
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=26.58 E-value=2.2e+02 Score=24.45 Aligned_cols=85 Identities=13% Similarity=0.053 Sum_probs=47.8
Q ss_pred ceeeccccccccCCChhhHHHHHHHHhcCCcE--EecCC---CCCCHHHHH-------hcCC--CceeEEEccccChHHH
Q 025657 76 PIMIAPTAFQKMAHPEGECATARAASAAGTIM--TLSSW---ATSSVEEVS-------STGP--GIRFFQLYVTKHRNVD 141 (249)
Q Consensus 76 Pi~iaP~g~~~l~h~~gE~~~AraA~~~gi~~--~lss~---ss~sleeia-------~~~~--~~~wfQlY~~~d~~~~ 141 (249)
|.++.|+.-.+-++.++=..+++---+.|+-- +.||. .+.|.||-. +... -+.+...- ..+-..+
T Consensus 10 ~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg-~~~t~~a 88 (300)
T 3eb2_A 10 PYLVSPVDAEGRVRADVMGRLCDDLIQAGVHGLTPLGSTGEFAYLGTAQREAVVRATIEAAQRRVPVVAGVA-STSVADA 88 (300)
T ss_dssp EBCCCCBCTTSCBCHHHHHHHHHHHHHTTCSCBBTTSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCBEEEEE-ESSHHHH
T ss_pred EEEeccCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCC-CCCHHHH
Confidence 44556654333334444446666666667643 33432 234555432 2112 34566653 2355667
Q ss_pred HHHHHHHHHcCCcEEEEeec
Q 025657 142 AQLVKRAERAGFKAIALTVD 161 (249)
Q Consensus 142 ~~li~rA~~aG~~alvvTvD 161 (249)
.++.++|+++|+.++++..=
T Consensus 89 i~la~~a~~~Gadavlv~~P 108 (300)
T 3eb2_A 89 VAQAKLYEKLGADGILAILE 108 (300)
T ss_dssp HHHHHHHHHHTCSEEEEEEC
T ss_pred HHHHHHHHHcCCCEEEEcCC
Confidence 78889999999999888654
No 313
>1o60_A 2-dehydro-3-deoxyphosphooctonate aldolase; structural genomics, transferase; 1.80A {Haemophilus influenzae} SCOP: c.1.10.4 PDB: 3e9a_A
Probab=26.51 E-value=1.4e+02 Score=25.97 Aligned_cols=63 Identities=16% Similarity=0.141 Sum_probs=44.9
Q ss_pred ChhhHHHHHHHHhcCCcEEecCCCCCCHHHHHhcCCCceeEEEccccChHHHHHHHHHHHHcCCcEEE
Q 025657 90 PEGECATARAASAAGTIMTLSSWATSSVEEVSSTGPGIRFFQLYVTKHRNVDAQLVKRAERAGFKAIA 157 (249)
Q Consensus 90 ~~gE~~~AraA~~~gi~~~lss~ss~sleeia~~~~~~~wfQlY~~~d~~~~~~li~rA~~aG~~alv 157 (249)
.+|-..+.+.+.+.|+|++.+-+...+++.+++. ..|+|+=-..-+. .+|++.+.+.|...++
T Consensus 75 ~~gl~~l~~~~~~~Glp~~te~~d~~~~~~l~~~---vd~~kIgA~~~~n--~~Ll~~~a~~~kPV~l 137 (292)
T 1o60_A 75 EEGLKIFQELKDTFGVKIITDVHEIYQCQPVADV---VDIIQLPAFLARQ--TDLVEAMAKTGAVINV 137 (292)
T ss_dssp HHHHHHHHHHHHHHCCEEEEECCSGGGHHHHHTT---CSEEEECGGGTTC--HHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHHcCCcEEEecCCHHHHHHHHhc---CCEEEECcccccC--HHHHHHHHcCCCcEEE
Confidence 4455578888999999999988888888888763 4699993221122 2577777777765543
No 314
>3r0u_A Enzyme of enolase superfamily; structural genomics, putative epimerase, PSI-biolog YORK structural genomics research consortium; HET: MSE TAR; 1.90A {Francisella philomiragia subsp} PDB: 3px5_A* 3r0k_A* 3r10_A 3r11_A 3r1z_A*
Probab=26.42 E-value=1.3e+02 Score=26.83 Aligned_cols=36 Identities=14% Similarity=0.416 Sum_probs=29.6
Q ss_pred CCCHHHHHHHHHhCCCCEEEEc-cCCHHHHHHHhhCC
Q 025657 214 SLNWKDVKWLQTITSLPILVKG-VLTAEDGSKLLSKE 249 (249)
Q Consensus 214 ~~tW~dl~wlr~~~~lPivlKG-Il~~eDA~~A~~~~ 249 (249)
.-+|+.++.|++.++.||..=. +.+++|++.+++.|
T Consensus 225 ~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~ 261 (379)
T 3r0u_A 225 YYDIKAMAEITKFSNIPVVADESVFDAKDAERVIDEQ 261 (379)
T ss_dssp TTCHHHHHHHHHHCSSCEEESTTCSSHHHHHHHHHTT
T ss_pred cccHHHHHHHHhcCCCCEEeCCccCCHHHHHHHHHcC
Confidence 3468899999999999999864 66789998888754
No 315
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=26.27 E-value=2.8e+02 Score=23.09 Aligned_cols=25 Identities=8% Similarity=0.143 Sum_probs=20.2
Q ss_pred cChHHHHHHHHHHHHcCCcEEEEee
Q 025657 136 KHRNVDAQLVKRAERAGFKAIALTV 160 (249)
Q Consensus 136 ~d~~~~~~li~rA~~aG~~alvvTv 160 (249)
.|.+.+.++++...++|+.+|-|.+
T Consensus 28 p~~~~~~~~~~~l~~~G~D~IElG~ 52 (262)
T 2ekc_A 28 PDYETSLKAFKEVLKNGTDILEIGF 52 (262)
T ss_dssp SCHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred CChHHHHHHHHHHHHcCCCEEEECC
Confidence 4556788899999999999998743
No 316
>3kzp_A LMO0111 protein, putative diguanylate cyclase/phosphodiesterase; EAL-domain, structural genomics, PSI-2; 2.00A {Listeria monocytogenes}
Probab=26.18 E-value=57 Score=26.29 Aligned_cols=30 Identities=23% Similarity=0.181 Sum_probs=25.3
Q ss_pred HHHHHHhCCCCEEEEccCCHHHHHHHhhCC
Q 025657 220 VKWLQTITSLPILVKGVLTAEDGSKLLSKE 249 (249)
Q Consensus 220 l~wlr~~~~lPivlKGIl~~eDA~~A~~~~ 249 (249)
+-.+.+..+..+|+.||-+.++...+.+.|
T Consensus 191 i~~~a~~lg~~viaeGVEt~~~~~~l~~~G 220 (235)
T 3kzp_A 191 WANFAQKNKLDFVVEGIETKETMTLLESHG 220 (235)
T ss_dssp HHHHHHHTTCEEEEEEECSTHHHHHHHHTT
T ss_pred HHHHHHHcCCEEEEEEecCHHHHHHHHHcC
Confidence 444556789999999999999999998876
No 317
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=25.92 E-value=64 Score=27.21 Aligned_cols=32 Identities=9% Similarity=0.130 Sum_probs=24.7
Q ss_pred HHHHHHHHhCCCCEEE-EccCCHHHHHHHhhCC
Q 025657 218 KDVKWLQTITSLPILV-KGVLTAEDGSKLLSKE 249 (249)
Q Consensus 218 ~dl~wlr~~~~lPivl-KGIl~~eDA~~A~~~~ 249 (249)
+.|+.|++..+..++- =.|+++|+|+.|+++|
T Consensus 74 e~I~~l~~~~~~~~iGaGTVlt~~~a~~Ai~AG 106 (232)
T 4e38_A 74 EAIRLLRQAQPEMLIGAGTILNGEQALAAKEAG 106 (232)
T ss_dssp HHHHHHHHHCTTCEEEEECCCSHHHHHHHHHHT
T ss_pred HHHHHHHHhCCCCEEeECCcCCHHHHHHHHHcC
Confidence 6788899887554443 2389999999999987
No 318
>2dqw_A Dihydropteroate synthase; dimer, structural genomics; 1.65A {Thermus thermophilus} PDB: 2dza_A* 2dzb_A*
Probab=25.67 E-value=1.6e+02 Score=25.68 Aligned_cols=21 Identities=24% Similarity=0.262 Sum_probs=16.9
Q ss_pred HHHHHHHHHHHHcCCcEEEEe
Q 025657 139 NVDAQLVKRAERAGFKAIALT 159 (249)
Q Consensus 139 ~~~~~li~rA~~aG~~alvvT 159 (249)
+...+.+++|+++|++-|++.
T Consensus 177 ~~l~~~i~~a~~~Gi~~IilD 197 (294)
T 2dqw_A 177 AFLEAQARRALSAGVPQVVLD 197 (294)
T ss_dssp HHHHHHHHHHHHTTCSCEEEE
T ss_pred HHHHHHHHHHHHCCCCcEEEc
Confidence 466788899999999977665
No 319
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=25.61 E-value=1.8e+02 Score=26.37 Aligned_cols=63 Identities=11% Similarity=0.167 Sum_probs=49.1
Q ss_pred cChHHHHHHHHHHHHcCCcEEEEeecCCCCCCchhhhhccCCCCCccccccccccccCCCCCCCCchhhhHhhhhcCCCC
Q 025657 136 KHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSL 215 (249)
Q Consensus 136 ~d~~~~~~li~rA~~aG~~alvvTvD~p~~g~Re~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (249)
.|-+.+.+.+++.+++||.=+=+||...-
T Consensus 43 ~D~~atv~Qi~~l~~aG~diVRvavp~~~--------------------------------------------------- 71 (366)
T 3noy_A 43 HDVEATLNQIKRLYEAGCEIVRVAVPHKE--------------------------------------------------- 71 (366)
T ss_dssp TCHHHHHHHHHHHHHTTCCEEEEECCSHH---------------------------------------------------
T ss_pred cCHHHHHHHHHHHHHcCCCEEEeCCCChH---------------------------------------------------
Confidence 47778888899999999998766665200
Q ss_pred CHHHHHHHHHhCCCCEEEEccCCHHHHHHHhhCC
Q 025657 216 NWKDVKWLQTITSLPILVKGVLTAEDGSKLLSKE 249 (249)
Q Consensus 216 tW~dl~wlr~~~~lPivlKGIl~~eDA~~A~~~~ 249 (249)
.-+-++.||++.+.|||.===.++.-|..|+++|
T Consensus 72 ~a~al~~I~~~~~vPlvaDiHf~~~lal~a~e~G 105 (366)
T 3noy_A 72 DVEALEEIVKKSPMPVIADIHFAPSYAFLSMEKG 105 (366)
T ss_dssp HHHHHHHHHHHCSSCEEEECCSCHHHHHHHHHTT
T ss_pred HHHHHHHHHhcCCCCEEEeCCCCHHHHHHHHHhC
Confidence 0145788999999999987768999999998876
No 320
>1z4e_A Transcriptional regulator; nysgxrc target T2017, GNAT fold, structural genomics, PSI, P structure initiative; 2.00A {Bacillus halodurans} SCOP: d.108.1.1
Probab=25.59 E-value=66 Score=23.19 Aligned_cols=39 Identities=23% Similarity=0.205 Sum_probs=24.3
Q ss_pred HHHHHHHHHHHHcCCcEEEEeecCCCCCCchhhhhccCC
Q 025657 139 NVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFV 177 (249)
Q Consensus 139 ~~~~~li~rA~~aG~~alvvTvD~p~~g~Re~d~r~~~~ 177 (249)
.+...+++.|++.|++.|.++|+.....-+.-=.|.||.
T Consensus 105 ~Ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~~Y~k~GF~ 143 (153)
T 1z4e_A 105 QLVCWAIERAKERGCHLIQLTTDKQRPDALRFYEQLGFK 143 (153)
T ss_dssp HHHHHHHHHHHHTTEEEEEEEEETTCTTHHHHHHHHTCE
T ss_pred HHHHHHHHHHHHcCCCEEEEEEccCChHHHHHHHHcCCc
Confidence 355566677778899999999876432222222345553
No 321
>2nql_A AGR_PAT_674P, isomerase/lactonizing enzyme; enolase, structural genomics, protein structure initiative, nysgxrc; 1.80A {Agrobacterium tumefaciens str} PDB: 4dn1_A
Probab=25.53 E-value=71 Score=28.47 Aligned_cols=36 Identities=17% Similarity=0.077 Sum_probs=30.7
Q ss_pred CCCHHHHHHHHHhCCCCEEEEc-cCCHHHHHHHhhCC
Q 025657 214 SLNWKDVKWLQTITSLPILVKG-VLTAEDGSKLLSKE 249 (249)
Q Consensus 214 ~~tW~dl~wlr~~~~lPivlKG-Il~~eDA~~A~~~~ 249 (249)
.-+|+.++.|++.++.||+.=+ |.+++|++++++.|
T Consensus 245 ~~d~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~ 281 (388)
T 2nql_A 245 TEDIAGLEKVSKNTDVPIAVGEEWRTHWDMRARIERC 281 (388)
T ss_dssp TTCHHHHHHHHTSCCSCEEECTTCCSHHHHHHHHTTS
T ss_pred hhhHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHcC
Confidence 4579999999999999999877 45799999998764
No 322
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=25.49 E-value=66 Score=27.50 Aligned_cols=30 Identities=30% Similarity=0.538 Sum_probs=25.5
Q ss_pred HHHHHHHHhCCCCEEEE-ccCCHHHHHHHhh
Q 025657 218 KDVKWLQTITSLPILVK-GVLTAEDGSKLLS 247 (249)
Q Consensus 218 ~dl~wlr~~~~lPivlK-GIl~~eDA~~A~~ 247 (249)
+.++.+|+.++.|+++= ||-++|+|+.+.+
T Consensus 189 ~~v~~vr~~~~~Pv~vGfGIst~e~a~~~~~ 219 (252)
T 3tha_A 189 DKVKEIRSFTNLPIFVGFGIQNNQDVKRMRK 219 (252)
T ss_dssp HHHHHHHTTCCSCEEEESSCCSHHHHHHHTT
T ss_pred HHHHHHHHhcCCcEEEEcCcCCHHHHHHHHh
Confidence 45789999999999884 7999999988765
No 323
>3l23_A Sugar phosphate isomerase/epimerase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=25.29 E-value=34 Score=29.18 Aligned_cols=33 Identities=15% Similarity=0.247 Sum_probs=20.8
Q ss_pred eeEEEccccCh--H-HHHHHHHHHHHcCCcEEEEee
Q 025657 128 RFFQLYVTKHR--N-VDAQLVKRAERAGFKAIALTV 160 (249)
Q Consensus 128 ~wfQlY~~~d~--~-~~~~li~rA~~aG~~alvvTv 160 (249)
.=+|+|..++. + -..+.+++++++||++|=+..
T Consensus 15 ~g~~~~s~~~~~~~~~~~~~l~~~a~~G~~~VEl~~ 50 (303)
T 3l23_A 15 IGLQIYSLSQELYKGDVAANLRKVKDMGYSKLELAG 50 (303)
T ss_dssp CEEEGGGGGGGGGSSCHHHHHHHHHHTTCCEEEECC
T ss_pred eEEEEEEchhhhccCCHHHHHHHHHHcCCCEEEecc
Confidence 45677776664 1 245666777777777776654
No 324
>3tqp_A Enolase; energy metabolism, lyase; 2.20A {Coxiella burnetii}
Probab=25.06 E-value=58 Score=30.00 Aligned_cols=36 Identities=19% Similarity=0.202 Sum_probs=27.4
Q ss_pred CCCHHHHHHHHHhCCCCEEEEc----cCCHHHHHHHhhCC
Q 025657 214 SLNWKDVKWLQTITSLPILVKG----VLTAEDGSKLLSKE 249 (249)
Q Consensus 214 ~~tW~dl~wlr~~~~lPivlKG----Il~~eDA~~A~~~~ 249 (249)
.-+|+.+++|++.++.||-|=| +.+++|.+++++.|
T Consensus 290 ~dD~eg~~~L~~~~~~pI~ivGDel~vt~~~~~~~~i~~~ 329 (428)
T 3tqp_A 290 ENDWAGWKLLTERLENKVQLVGDDIFVTNPDILEKGIKKN 329 (428)
T ss_dssp TTCHHHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHTT
T ss_pred cccHHHHHHHHHhcCCCcceeccccccCCHHHHHHHHHhC
Confidence 4589999999999887764423 34899999988754
No 325
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=25.04 E-value=2.9e+02 Score=22.74 Aligned_cols=31 Identities=16% Similarity=0.127 Sum_probs=24.6
Q ss_pred CCCHHHHHHHHHhCCCCEEEEc-cC--CHHHHHH
Q 025657 214 SLNWKDVKWLQTITSLPILVKG-VL--TAEDGSK 244 (249)
Q Consensus 214 ~~tW~dl~wlr~~~~lPivlKG-Il--~~eDA~~ 244 (249)
+.+|+.++++++..+.||+.=| |- +.||+..
T Consensus 188 ~~~~~~l~~i~~~~~ipvva~GGi~~~~~~~~~~ 221 (273)
T 2qjg_A 188 TGDIDSFRDVVKGCPAPVVVAGGPKTNTDEEFLQ 221 (273)
T ss_dssp CSSHHHHHHHHHHCSSCEEEECCSCCSSHHHHHH
T ss_pred CCCHHHHHHHHHhCCCCEEEEeCCCCCCHHHHHH
Confidence 4789999999999999998877 55 3778443
No 326
>3i4k_A Muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9450D, isomerase, PSI-2, protein structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=24.95 E-value=98 Score=27.57 Aligned_cols=36 Identities=8% Similarity=0.212 Sum_probs=29.6
Q ss_pred CCCHHHHHHHHHhCCCCEEEEc-cCCHHHHHHHhhCC
Q 025657 214 SLNWKDVKWLQTITSLPILVKG-VLTAEDGSKLLSKE 249 (249)
Q Consensus 214 ~~tW~dl~wlr~~~~lPivlKG-Il~~eDA~~A~~~~ 249 (249)
.-+|+.++.|++.++.||..=+ +.+++|++.+++.|
T Consensus 231 ~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~ 267 (383)
T 3i4k_A 231 ADDLETLREITRRTNVSVMADESVWTPAEALAVVKAQ 267 (383)
T ss_dssp TTCHHHHHHHHHHHCCEEEESTTCSSHHHHHHHHHHT
T ss_pred hhhHHHHHHHHhhCCCCEEecCccCCHHHHHHHHHcC
Confidence 3478999999999999999865 56799999888643
No 327
>3txv_A Probable tagatose 6-phosphate kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.80A {Sinorhizobium meliloti}
Probab=24.93 E-value=72 Score=29.78 Aligned_cols=36 Identities=11% Similarity=0.143 Sum_probs=28.9
Q ss_pred CCCHHHHHHHHHhC-CCC-EEEEccC----CHHHHHHHhhCC
Q 025657 214 SLNWKDVKWLQTIT-SLP-ILVKGVL----TAEDGSKLLSKE 249 (249)
Q Consensus 214 ~~tW~dl~wlr~~~-~lP-ivlKGIl----~~eDA~~A~~~~ 249 (249)
.++.+.++.|++.. +.| +|++|=. +.++-+++++.|
T Consensus 241 ~y~~e~~~~L~~~v~~~P~LVlhghStDy~~~e~l~~~V~~G 282 (450)
T 3txv_A 241 AYDRARAEKLSATLGQLHGMVFEAHSTDYQTPDALRELVADG 282 (450)
T ss_dssp CCCTTTTSHHHHGGGTSTTCEEEESCCTTCCHHHHHHHHHTT
T ss_pred CCCHHHHHHHHHHhccCCCEEEecCCCCCCCHHHHHHHHHcC
Confidence 45677899999998 789 9999965 777778887765
No 328
>3sjn_A Mandelate racemase/muconate lactonizing protein; enolase, magnesium binding site, lyase; 1.90A {Shewanella pealeana}
Probab=24.88 E-value=1.2e+02 Score=26.87 Aligned_cols=34 Identities=15% Similarity=-0.007 Sum_probs=28.2
Q ss_pred CCHHHHHHHHHhCCCCEEEEc-cCCHHHHHHHhhC
Q 025657 215 LNWKDVKWLQTITSLPILVKG-VLTAEDGSKLLSK 248 (249)
Q Consensus 215 ~tW~dl~wlr~~~~lPivlKG-Il~~eDA~~A~~~ 248 (249)
-+|+.++.||+.++.||..=+ +.+++|++.+++.
T Consensus 232 ~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~ 266 (374)
T 3sjn_A 232 DSLISYEKLSRQVSQKIAGGESLTTRYEFQEFITK 266 (374)
T ss_dssp TCHHHHHHHHHHCSSEEEECTTCCHHHHHHHHHHH
T ss_pred ccHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHc
Confidence 478999999999999999866 4558899888754
No 329
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=24.73 E-value=83 Score=27.35 Aligned_cols=22 Identities=18% Similarity=0.283 Sum_probs=16.7
Q ss_pred HHHHHHHHHHH---HcCCcEEEEee
Q 025657 139 NVDAQLVKRAE---RAGFKAIALTV 160 (249)
Q Consensus 139 ~~~~~li~rA~---~aG~~alvvTv 160 (249)
+...++|+||+ +||+.+|++-.
T Consensus 158 ~~a~~~i~rA~a~~eAGA~~ivlE~ 182 (275)
T 1o66_A 158 GKAQALLNDAKAHDDAGAAVVLMEC 182 (275)
T ss_dssp -CHHHHHHHHHHHHHTTCSEEEEES
T ss_pred HHHHHHHHHHHHHHHcCCcEEEEec
Confidence 44578888886 59999999855
No 330
>3mwc_A Mandelate racemase/muconate lactonizing protein; enolase, structural genomics, protein structure initiative, nysgrc; 1.80A {Kosmotoga olearia}
Probab=24.34 E-value=96 Score=27.92 Aligned_cols=36 Identities=14% Similarity=0.076 Sum_probs=29.4
Q ss_pred CCCHHHHHHHHHhCCCCEEEEc-cCCHHHHHHHhhCC
Q 025657 214 SLNWKDVKWLQTITSLPILVKG-VLTAEDGSKLLSKE 249 (249)
Q Consensus 214 ~~tW~dl~wlr~~~~lPivlKG-Il~~eDA~~A~~~~ 249 (249)
+-+|+.++.|++.++.||..=. +.+++|++.+++.|
T Consensus 241 ~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~ 277 (400)
T 3mwc_A 241 YEALLDLKELGERIETPICLDESLISSRVAEFVAKLG 277 (400)
T ss_dssp TTCHHHHHHHHHHSSSCEEESTTCCSHHHHHHHHHTT
T ss_pred hhhHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHhcC
Confidence 3468999999999999999854 56799999888654
No 331
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=24.33 E-value=61 Score=28.66 Aligned_cols=36 Identities=8% Similarity=-0.127 Sum_probs=30.4
Q ss_pred CCCHHHHHHHHHhCCCCEEEEc-cCCHHHHHHHhhCC
Q 025657 214 SLNWKDVKWLQTITSLPILVKG-VLTAEDGSKLLSKE 249 (249)
Q Consensus 214 ~~tW~dl~wlr~~~~lPivlKG-Il~~eDA~~A~~~~ 249 (249)
.-+|+.+++|++.++.||+.=+ |.+++|++.+++.|
T Consensus 228 ~~d~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~ 264 (371)
T 2ovl_A 228 PDDLVGNARIVRESGHTIAGGENLHTLYDFHNAVRAG 264 (371)
T ss_dssp TTCHHHHHHHHHHHCSCEEECTTCCSHHHHHHHHHHT
T ss_pred cccHHHHHHHHhhCCCCEEeCCCCCCHHHHHHHHHcC
Confidence 4579999999999999999876 56899999987653
No 332
>1vd6_A Glycerophosphoryl diester phosphodiesterase; glycerophosphod phosphodiesterase, HB8; 1.30A {Thermus thermophilus} SCOP: c.1.18.3 PDB: 1v8e_A
Probab=24.30 E-value=36 Score=27.84 Aligned_cols=24 Identities=25% Similarity=0.314 Sum_probs=20.8
Q ss_pred HHHHHHHHHHHcCCcEEEEeecCC
Q 025657 140 VDAQLVKRAERAGFKAIALTVDTP 163 (249)
Q Consensus 140 ~~~~li~rA~~aG~~alvvTvD~p 163 (249)
.+.+++++++++|.+..+.|||.+
T Consensus 174 ~~~~~v~~~~~~G~~v~~wtvn~~ 197 (224)
T 1vd6_A 174 VTEEAVAGWRKRGLFVVAWTVNEE 197 (224)
T ss_dssp CCHHHHHHHHHTTCEEEEECCCCH
T ss_pred CCHHHHHHHHHCCCEEEEEeCCCH
Confidence 457899999999999999999864
No 333
>3jvn_A Acetyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; 2.61A {Vibrio fischeri}
Probab=23.90 E-value=65 Score=23.29 Aligned_cols=39 Identities=18% Similarity=0.077 Sum_probs=19.6
Q ss_pred HHHHHHHHHHHHcCCcEEEEeecCCCCCCchhhhhccCC
Q 025657 139 NVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFV 177 (249)
Q Consensus 139 ~~~~~li~rA~~aG~~alvvTvD~p~~g~Re~d~r~~~~ 177 (249)
.++..+++.|++.|++.|.++|+.....-+.-=.|.||.
T Consensus 108 ~ll~~~~~~a~~~g~~~i~l~v~~~n~~a~~~y~k~GF~ 146 (166)
T 3jvn_A 108 QLMMRIEQELKDYGVKEIFVEVWDFNKGALEFYNKQGLN 146 (166)
T ss_dssp HHHHHHHHHHHTTTCSEEEECCC--CCBC----------
T ss_pred HHHHHHHHHHHHcCCCEEEEEEecCCHHHHHHHHHcCCe
Confidence 455566677777899999999876543333333455553
No 334
>3ndo_A Deoxyribose-phosphate aldolase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; HET: GOL; 1.25A {Mycobacterium smegmatis} PDB: 3ng3_A
Probab=23.81 E-value=67 Score=27.13 Aligned_cols=36 Identities=22% Similarity=0.272 Sum_probs=30.5
Q ss_pred CCCHHHHHHHHHhCCCCEEEE---ccCCHHHHHHHhhCC
Q 025657 214 SLNWKDVKWLQTITSLPILVK---GVLTAEDGSKLLSKE 249 (249)
Q Consensus 214 ~~tW~dl~wlr~~~~lPivlK---GIl~~eDA~~A~~~~ 249 (249)
.-|-+|++-+|+..+.++=|| ||-+.+||..-+++|
T Consensus 174 gAt~edv~lm~~~v~~~v~VKaaGGIrt~~~a~~~i~aG 212 (231)
T 3ndo_A 174 GASVQAVEIMARTVGERLGVKASGGIRTAEQAAAMLDAG 212 (231)
T ss_dssp SCCHHHHHHHHHHHTTTSEEEEESSCCSHHHHHHHHHTT
T ss_pred CCCHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHhc
Confidence 346789999999988777777 699999999988877
No 335
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=23.57 E-value=1.2e+02 Score=26.36 Aligned_cols=21 Identities=24% Similarity=0.271 Sum_probs=17.2
Q ss_pred HHHHHHHHHH---HcCCcEEEEee
Q 025657 140 VDAQLVKRAE---RAGFKAIALTV 160 (249)
Q Consensus 140 ~~~~li~rA~---~aG~~alvvTv 160 (249)
...++|+||+ +||+.+|++-.
T Consensus 177 ~a~~~i~rA~a~~eAGA~~ivlE~ 200 (281)
T 1oy0_A 177 AAEQTIADAIAVAEAGAFAVVMEM 200 (281)
T ss_dssp HHHHHHHHHHHHHHHTCSEEEEES
T ss_pred HHHHHHHHHHHHHHcCCcEEEEec
Confidence 5678888887 59999999855
No 336
>4h83_A Mandelate racemase/muconate lactonizing enzyme; structural genomics, enzyme function initiative; 2.09A {Marine actinobacterium PHSC20C1} PDB: 3no1_A 3msy_A
Probab=23.54 E-value=1.1e+02 Score=27.35 Aligned_cols=33 Identities=12% Similarity=0.202 Sum_probs=26.4
Q ss_pred HHHHHHHHHhCCCCEEE-EccCCHHHHHHHhhCC
Q 025657 217 WKDVKWLQTITSLPILV-KGVLTAEDGSKLLSKE 249 (249)
Q Consensus 217 W~dl~wlr~~~~lPivl-KGIl~~eDA~~A~~~~ 249 (249)
++.+++|++.++.||.. --+.+.+|++.+++.|
T Consensus 250 ~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~ 283 (388)
T 4h83_A 250 KRSMRDVRYQGSVPVCAGQTEFSASGCRDLMETG 283 (388)
T ss_dssp HHHHHHHHHHSSSCEEECTTCSSHHHHHHHHHHT
T ss_pred hHHHHHHHhhcCCCccCCccccChHhHHHHHHcC
Confidence 55688999999999987 3577889998887654
No 337
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=23.54 E-value=2.8e+02 Score=23.58 Aligned_cols=83 Identities=16% Similarity=0.018 Sum_probs=42.7
Q ss_pred ceeeccccccccCCChhhHHHHHHHHhcCCc--EEecCCC---CCCHHHHH-------hc-CC-CceeEEEccccChHHH
Q 025657 76 PIMIAPTAFQKMAHPEGECATARAASAAGTI--MTLSSWA---TSSVEEVS-------ST-GP-GIRFFQLYVTKHRNVD 141 (249)
Q Consensus 76 Pi~iaP~g~~~l~h~~gE~~~AraA~~~gi~--~~lss~s---s~sleeia-------~~-~~-~~~wfQlY~~~d~~~~ 141 (249)
|.++.|+.-. -++.++=..+.+---+.|+- ++.||.+ +.|.||-. +. .+ -+.+...- ..+-..+
T Consensus 9 ~a~vTPf~~d-~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg-~~~t~~a 86 (292)
T 3daq_A 9 VALTTPFTNN-KVNLEALKAHVNFLLENNAQAIIVNGTTAESPTLTTDEKELILKTVIDLVDKRVPVIAGTG-TNDTEKS 86 (292)
T ss_dssp EECCCCEETT-EECHHHHHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECC-CSCHHHH
T ss_pred EeeecCcCCC-CcCHHHHHHHHHHHHHcCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCcEEEeCC-cccHHHH
Confidence 4445565433 23444444566655566663 3334322 33444421 11 11 23455542 2344556
Q ss_pred HHHHHHHHHcCCcEEEEee
Q 025657 142 AQLVKRAERAGFKAIALTV 160 (249)
Q Consensus 142 ~~li~rA~~aG~~alvvTv 160 (249)
.++.++|+++|+.++++..
T Consensus 87 i~la~~a~~~Gadavlv~~ 105 (292)
T 3daq_A 87 IQASIQAKALGADAIMLIT 105 (292)
T ss_dssp HHHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHHHHcCCCEEEECC
Confidence 6778888888888887763
No 338
>3nk6_A 23S rRNA methyltransferase; nosiheptide, nosiheptide-resistance methyltransferase, 23S R methyltransferase; 2.00A {Streptomyces actuosus} PDB: 3nk7_A* 3gyq_A*
Probab=23.47 E-value=2.1e+02 Score=24.39 Aligned_cols=57 Identities=14% Similarity=0.036 Sum_probs=44.2
Q ss_pred hcCCcEEecCCCCCCHHHHHhcCCCceeEEEccccChHHHHHHHHHHHHcCCcEEEEee
Q 025657 102 AAGTIMTLSSWATSSVEEVSSTGPGIRFFQLYVTKHRNVDAQLVKRAERAGFKAIALTV 160 (249)
Q Consensus 102 ~~gi~~~lss~ss~sleeia~~~~~~~wfQlY~~~d~~~~~~li~rA~~aG~~alvvTv 160 (249)
-.|+...+......+++++... +.+ ++=|.-..|+.-+-.+++-|.+.|+.+++++=
T Consensus 96 ~qGv~a~~~~~~~~~l~~~~~~-~~~-~lvLd~v~dP~NlGaI~Rta~a~G~~~vil~~ 152 (277)
T 3nk6_A 96 KAKVFGIARVPRPARLADIAER-GGD-VVVLDGVKIVGNIGAIVRTSLALGAAGIVLVD 152 (277)
T ss_dssp -CCEEEEEECCCCCCHHHHHHH-CSC-EEEEESCCCHHHHHHHHHHHHHTTCSEEEEES
T ss_pred CCeEEEEEecCCCCCHHHHhcc-CCC-EEEEEcCCCcchHHHHHHHHHHcCCCEEEEcC
Confidence 4567777766556688888643 233 76677778999999999999999999999976
No 339
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=23.47 E-value=2.1e+02 Score=23.39 Aligned_cols=25 Identities=20% Similarity=0.162 Sum_probs=20.3
Q ss_pred cChHHHHHHHHHHHHcCCcEEEEee
Q 025657 136 KHRNVDAQLVKRAERAGFKAIALTV 160 (249)
Q Consensus 136 ~d~~~~~~li~rA~~aG~~alvvTv 160 (249)
.|.....+.+++++++|++.+=+.+
T Consensus 14 ~D~~~l~~~i~~~~~~Gad~ihldi 38 (230)
T 1tqj_A 14 ADFSRLGEEIKAVDEAGADWIHVDV 38 (230)
T ss_dssp SCGGGHHHHHHHHHHTTCSEEEEEE
T ss_pred cCHhHHHHHHHHHHHcCCCEEEEEE
Confidence 5777788899999999999875555
No 340
>3viv_A 441AA long hypothetical NFED protein; protein-peptide complex, alpha / beta motif, protease, membr protein stomatin, hydrolase-protein binding complex; 2.25A {Pyrococcus horikoshii} PDB: 3bpp_A 2deo_A
Probab=23.36 E-value=72 Score=26.73 Aligned_cols=25 Identities=28% Similarity=0.353 Sum_probs=20.4
Q ss_pred HHHHHHHHHHHcCCcEEEEeecCCC
Q 025657 140 VDAQLVKRAERAGFKAIALTVDTPR 164 (249)
Q Consensus 140 ~~~~li~rA~~aG~~alvvTvD~p~ 164 (249)
...+.+++|++.+.++|+|++|+|.
T Consensus 26 ~l~~~l~~a~~~~~~~Ivl~inspG 50 (230)
T 3viv_A 26 QFDRYITIAEQDNAEAIIIELDTPG 50 (230)
T ss_dssp HHHHHHHHHHHTTCSEEEEEEEBSC
T ss_pred HHHHHHHHHhcCCCCEEEEEEeCCC
Confidence 4456667888889999999999986
No 341
>2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.48A {Mesorhizobium loti}
Probab=23.31 E-value=81 Score=28.13 Aligned_cols=36 Identities=14% Similarity=0.066 Sum_probs=30.7
Q ss_pred CCCHHHHHHHHHhC-CCCEEEEccCCHHHHHHHhhCC
Q 025657 214 SLNWKDVKWLQTIT-SLPILVKGVLTAEDGSKLLSKE 249 (249)
Q Consensus 214 ~~tW~dl~wlr~~~-~lPivlKGIl~~eDA~~A~~~~ 249 (249)
.-+|+.++.|++.+ +.||+.=+-.+++|++++++.|
T Consensus 229 ~~~~~~~~~l~~~~~~iPIa~dE~~~~~~~~~~i~~~ 265 (389)
T 2oz8_A 229 RHDHDGLRTLRHAVTWTQINSGEYLDLQGKRLLLEAH 265 (389)
T ss_dssp TTCHHHHHHHHHHCCSSEEEECTTCCHHHHHHHHHTT
T ss_pred CcCHHHHHHHHhhCCCCCEEeCCCCCHHHHHHHHHcC
Confidence 34799999999999 9999997755999999988764
No 342
>3fok_A Uncharacterized protein CGL0159; CGL0159 ,brevibacterium flavum., structural genomics, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum}
Probab=23.24 E-value=2.2e+02 Score=25.08 Aligned_cols=87 Identities=14% Similarity=0.123 Sum_probs=49.9
Q ss_pred cccccceeeccccc----cccCC-ChhhH--HHHHHHHhcCCc----EEecCCCCCCHHHHHhcCCCceeEEEcccc--C
Q 025657 71 FNISMPIMIAPTAF----QKMAH-PEGEC--ATARAASAAGTI----MTLSSWATSSVEEVSSTGPGIRFFQLYVTK--H 137 (249)
Q Consensus 71 ~~~~~Pi~iaP~g~----~~l~h-~~gE~--~~AraA~~~gi~----~~lss~ss~sleeia~~~~~~~wfQlY~~~--d 137 (249)
+++.+|+++-|+.. .++.+ .+.|. ..+|.|.++|.- ++=-.+. -++++|.++++- +|.=+==.+ |
T Consensus 173 ~~~GlP~~~ep~~y~r~gg~v~~~~dp~~Va~aaRiAaELGADs~~tivK~~y~-e~f~~Vv~a~~v-PVViaGG~k~~~ 250 (307)
T 3fok_A 173 AAAQLPIMLEPFMSNWVNGKVVNDLSTDAVIQSVAIAAGLGNDSSYTWMKLPVV-EEMERVMESTTM-PTLLLGGEGGND 250 (307)
T ss_dssp HHTTCCEEEEEEEEEEETTEEEECCSHHHHHHHHHHHHTCSSCCSSEEEEEECC-TTHHHHGGGCSS-CEEEECCSCC--
T ss_pred HHcCCcEEEEeeccccCCCCcCCCCCHHHHHHHHHHHHHhCCCcCCCEEEeCCc-HHHHHHHHhCCC-CEEEeCCCCCCC
Confidence 45667877765432 22211 23343 778888888865 3211122 578888877653 343332222 4
Q ss_pred hHHHHHHHHHHHH-cCCcEEEEe
Q 025657 138 RNVDAQLVKRAER-AGFKAIALT 159 (249)
Q Consensus 138 ~~~~~~li~rA~~-aG~~alvvT 159 (249)
.+...++++.|-+ +|+..+++.
T Consensus 251 ~~e~L~~v~~A~~~aGa~Gv~vG 273 (307)
T 3fok_A 251 PDATFASWEHALTLPGVRGLTVG 273 (307)
T ss_dssp CHHHHHHHHHHTTSTTEEEEEEC
T ss_pred HHHHHHHHHHHHHhCCCeEEeec
Confidence 5667788888888 798887653
No 343
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=23.04 E-value=3.5e+02 Score=25.60 Aligned_cols=19 Identities=0% Similarity=-0.090 Sum_probs=15.7
Q ss_pred eeecCcccccceeeccccc
Q 025657 66 TTVLGFNISMPIMIAPTAF 84 (249)
Q Consensus 66 t~llG~~~~~Pi~iaP~g~ 84 (249)
.+|=+.++.-+|++|||+.
T Consensus 9 ~~ig~~~l~nRi~~apm~~ 27 (671)
T 1ps9_A 9 LDLGFTTLKNRVLMGSMHT 27 (671)
T ss_dssp EECSSCEESSSEEECCCCC
T ss_pred eeECCEEEcCceEECCccC
Confidence 4566788999999999875
No 344
>4gel_A Mitochondrial cardiolipin hydrolase; piRNA, phospholipase D, nuclease; 1.76A {Drosophila melanogaster} PDB: 4gem_A 4gen_A
Probab=23.01 E-value=1.2e+02 Score=24.13 Aligned_cols=44 Identities=9% Similarity=0.067 Sum_probs=30.9
Q ss_pred HHHHhcCCCceeEEEccccChHHHHHHHHHHHHcCCcEEEEeecCCC
Q 025657 118 EEVSSTGPGIRFFQLYVTKHRNVDAQLVKRAERAGFKAIALTVDTPR 164 (249)
Q Consensus 118 eeia~~~~~~~wfQlY~~~d~~~~~~li~rA~~aG~~alvvTvD~p~ 164 (249)
++|.+| .....++.|...|+++...|++. .+-|++.=+|+ |...
T Consensus 65 ~~I~~A-~~sI~i~~Y~~~~~~I~~aL~~A-a~RGV~VRii~-D~~~ 108 (220)
T 4gel_A 65 EQIDRA-VYSIDLAIYTFTSLFLADSIKRA-LQRGVIIRIIS-DGEM 108 (220)
T ss_dssp HHHHTC-SSEEEEECSCBCCHHHHHHHHHH-HHHTCEEEEEC-CTTT
T ss_pred HHHHHh-hhEEEEEEEEeCCHHHHHHHHHH-HHcCCeEEEEE-echh
Confidence 344433 34568999999999998777655 46699887775 6544
No 345
>3i6e_A Muconate cycloisomerase I; structural genomics, NYSGXRC, targer 9468A, muconate lactonizing enzyme, PSI-2, protein structure initiative; 1.70A {Ruegeria pomeroyi} PDB: 3i6t_A
Probab=22.97 E-value=1.1e+02 Score=27.16 Aligned_cols=36 Identities=19% Similarity=0.315 Sum_probs=29.0
Q ss_pred CCCHHHHHHHHHhCCCCEEEEc-cCCHHHHHHHhhCC
Q 025657 214 SLNWKDVKWLQTITSLPILVKG-VLTAEDGSKLLSKE 249 (249)
Q Consensus 214 ~~tW~dl~wlr~~~~lPivlKG-Il~~eDA~~A~~~~ 249 (249)
+-+|+.+++|++.++.||..=. +.+++|++.+++.|
T Consensus 229 ~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~ 265 (385)
T 3i6e_A 229 AHHFELMARLRGLTDVPLLADESVYGPEDMVRAAHEG 265 (385)
T ss_dssp TTCHHHHHHHHTTCSSCEEESTTCCSHHHHHHHHHHT
T ss_pred cccHHHHHHHHHhCCCCEEEeCCcCCHHHHHHHHHcC
Confidence 3468999999999999999854 56788998887643
No 346
>2otd_A Glycerophosphodiester phosphodiesterase; structural genomics PSI-2, protein structure initiative, midwest center for STR genomics, hydrolase; 2.60A {Shigella flexneri}
Probab=22.91 E-value=46 Score=27.60 Aligned_cols=23 Identities=30% Similarity=0.533 Sum_probs=18.9
Q ss_pred HHHHHHHHHHcCCcEEEEeecCC
Q 025657 141 DAQLVKRAERAGFKAIALTVDTP 163 (249)
Q Consensus 141 ~~~li~rA~~aG~~alvvTvD~p 163 (249)
+.+++++++++|.+..+.|||.+
T Consensus 196 ~~~~v~~~~~~G~~v~~wTvn~~ 218 (247)
T 2otd_A 196 DKARVMQLKDAGLRILVYTVNKP 218 (247)
T ss_dssp CHHHHHHHHHTTCEEEEECCCCH
T ss_pred CHHHHHHHHHCCCEEEEEccCCH
Confidence 46788888899999999998764
No 347
>2xhz_A KDSD, YRBH, arabinose 5-phosphate isomerase; lipopolysaccharide biogenesis; 2.60A {Escherichia coli}
Probab=22.63 E-value=1.4e+02 Score=22.88 Aligned_cols=38 Identities=13% Similarity=0.071 Sum_probs=29.1
Q ss_pred CCceeEEEccccChHHHHHHHHHHHHcCCcEEEEeecC
Q 025657 125 PGIRFFQLYVTKHRNVDAQLVKRAERAGFKAIALTVDT 162 (249)
Q Consensus 125 ~~~~wfQlY~~~d~~~~~~li~rA~~aG~~alvvTvD~ 162 (249)
++...+=+-..+.-..+.+.++.|++.|++.+.+|-..
T Consensus 96 ~~d~vI~iS~sG~t~~~~~~~~~ak~~g~~vi~IT~~~ 133 (183)
T 2xhz_A 96 PQDVVIAISNSGESSEITALIPVLKRLHVPLICITGRP 133 (183)
T ss_dssp TTCEEEEECSSSCCHHHHHHHHHHHTTTCCEEEEESCT
T ss_pred CCCEEEEEeCCCCCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 34455556666666778899999999999999999753
No 348
>1x60_A Sporulation-specific N-acetylmuramoyl-L-alanine amidase; CWLC, CWLCR, peptidoglycan, cell WALL lytic amidase, tandem repeats, hydrolase; NMR {Bacillus subtilis}
Probab=22.43 E-value=1.1e+02 Score=20.43 Aligned_cols=31 Identities=26% Similarity=0.489 Sum_probs=25.1
Q ss_pred eEEEc--cccChHHHHHHHHHHHHcCCcEEEEe
Q 025657 129 FFQLY--VTKHRNVDAQLVKRAERAGFKAIALT 159 (249)
Q Consensus 129 wfQlY--~~~d~~~~~~li~rA~~aG~~alvvT 159 (249)
|+.++ +..+++...+++++.++.|+++++++
T Consensus 45 ~yRV~vGpf~~~~~A~~~~~~L~~~g~~~~iv~ 77 (79)
T 1x60_A 45 LYKVQIGAFSSKDNADTLAARAKNAGFDAIVIL 77 (79)
T ss_dssp EEEEEEEEESSHHHHHHHHHHHHHHTSCCEEEE
T ss_pred EEEEEECCcCCHHHHHHHHHHHHHcCCceEEEe
Confidence 55554 45789999999999999999998875
No 349
>3t9y_A Acetyltransferase, GNAT family; PSI-biology, structural genomics, midwest center for structu genomics, MCSG; HET: PGE; 2.00A {Staphylococcus aureus}
Probab=22.40 E-value=70 Score=22.55 Aligned_cols=39 Identities=26% Similarity=0.266 Sum_probs=20.1
Q ss_pred HHHHHHHHHHHHcCCcEEEEeec--CCCCCCchhhhhccCC
Q 025657 139 NVDAQLVKRAERAGFKAIALTVD--TPRLGRREADIKNRFV 177 (249)
Q Consensus 139 ~~~~~li~rA~~aG~~alvvTvD--~p~~g~Re~d~r~~~~ 177 (249)
.+...+++.|++.|++.+.++++ ......+.-=.+.||.
T Consensus 100 ~ll~~~~~~~~~~g~~~i~l~~~~~~~N~~a~~~y~k~GF~ 140 (150)
T 3t9y_A 100 RLLADSEEFSKRLNCKAITLNSGNRNERLSAHKLYSDNGYV 140 (150)
T ss_dssp HHHHHHHHHHHHTTCSCEEECCCCCC------------CCC
T ss_pred HHHHHHHHHHHHcCCEEEEEEcCCCccchhHHHHHHHcCCE
Confidence 35556667777889999999988 4333333333445553
No 350
>2pz0_A Glycerophosphoryl diester phosphodiesterase; glycerophosphodiester phosphodiesterase, T. tengcongensis; 1.91A {Thermoanaerobacter tengcongensis}
Probab=22.34 E-value=46 Score=27.76 Aligned_cols=69 Identities=23% Similarity=0.272 Sum_probs=37.1
Q ss_pred HHHHHHHHhcCC--cEEecCCCCCCHHHHHhcCCCceeEEEccc-------------------cChHHHHHHHHHHHHcC
Q 025657 94 CATARAASAAGT--IMTLSSWATSSVEEVSSTGPGIRFFQLYVT-------------------KHRNVDAQLVKRAERAG 152 (249)
Q Consensus 94 ~~~AraA~~~gi--~~~lss~ss~sleeia~~~~~~~wfQlY~~-------------------~d~~~~~~li~rA~~aG 152 (249)
..+.+.-++.|. ..++||+....++.+.+..|...-.+++.. .-...+.+++++++++|
T Consensus 132 ~~v~~~l~~~~~~~~vii~SF~~~~l~~~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~v~~~~~~G 211 (252)
T 2pz0_A 132 EKLIKAIKEYNFEERVIISSFNHYSLRDVKKMAPHLKIGLLYQCGLVEPWHMALRMEAYSLHPFYFNIIPELVEGCKKNG 211 (252)
T ss_dssp HHHHHHHHHTTCTTTEEEEESBHHHHHHHHHHCTTSEEEEEECSBCSSTHHHHHHTTCSEEEEBGGGCCHHHHHHHHHTT
T ss_pred HHHHHHHHhcCCCCCEEEEeCCHHHHHHHHHHCCCCCEEEEecCccccHHHHHHHcCCeEEecchhcCCHHHHHHHHHCC
Confidence 345555555543 256666666666666655553322222211 11123456777777777
Q ss_pred CcEEEEeecC
Q 025657 153 FKAIALTVDT 162 (249)
Q Consensus 153 ~~alvvTvD~ 162 (249)
.+..+.|||.
T Consensus 212 ~~v~~wTvn~ 221 (252)
T 2pz0_A 212 VKLFPWTVDR 221 (252)
T ss_dssp CEECCBCCCS
T ss_pred CEEEEECCCC
Confidence 7777777764
No 351
>2y5s_A DHPS, dihydropteroate synthase; transferase, folate biosynthesis; HET: 78H; 1.95A {Burkholderia cenocepacia} PDB: 2y5j_A*
Probab=22.31 E-value=1.5e+02 Score=25.72 Aligned_cols=22 Identities=23% Similarity=0.264 Sum_probs=17.8
Q ss_pred hHHHHHHHHHHHHcCCc--EEEEe
Q 025657 138 RNVDAQLVKRAERAGFK--AIALT 159 (249)
Q Consensus 138 ~~~~~~li~rA~~aG~~--alvvT 159 (249)
.+...+.+++|+++|++ -|++.
T Consensus 170 ~~~l~~~i~~a~~~Gi~~~~IilD 193 (294)
T 2y5s_A 170 RDFLAARAQALRDAGVAAERICVD 193 (294)
T ss_dssp HHHHHHHHHHHHHTTCCGGGEEEE
T ss_pred HHHHHHHHHHHHHcCCChhhEEEe
Confidence 45667888999999998 68777
No 352
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=21.92 E-value=98 Score=25.77 Aligned_cols=34 Identities=15% Similarity=0.172 Sum_probs=28.0
Q ss_pred CHHHHHHHHHhCCCCEEEE-ccCCHHHHHHHhhCC
Q 025657 216 NWKDVKWLQTITSLPILVK-GVLTAEDGSKLLSKE 249 (249)
Q Consensus 216 tW~dl~wlr~~~~lPivlK-GIl~~eDA~~A~~~~ 249 (249)
..+.++++|+.++.||++= ||-++|++..+.++|
T Consensus 189 ~~~~i~~v~~~~~~pI~vgGGI~~~e~~~~~~~~G 223 (262)
T 1rd5_A 189 VESLIQEVKKVTNKPVAVGFGISKPEHVKQIAQWG 223 (262)
T ss_dssp HHHHHHHHHHHCSSCEEEESCCCSHHHHHHHHHTT
T ss_pred HHHHHHHHHhhcCCeEEEECCcCCHHHHHHHHHcC
Confidence 3467899999999999885 566699999998876
No 353
>2jvr_A Nucleolar protein 3; RNA recognition motif, nucleus, phosphorylation, ribonucleoprotein, ribosome biogenesis, RNA-binding; NMR {Saccharomyces cerevisiae} PDB: 2osr_A
Probab=21.90 E-value=81 Score=22.97 Aligned_cols=36 Identities=28% Similarity=0.309 Sum_probs=24.9
Q ss_pred CCCCCHHHHHHHHHhCCCCEE---E-----Ecc-----CCHHHHHHHhh
Q 025657 212 DRSLNWKDVKWLQTITSLPIL---V-----KGV-----LTAEDGSKLLS 247 (249)
Q Consensus 212 ~~~~tW~dl~wlr~~~~lPiv---l-----KGI-----l~~eDA~~A~~ 247 (249)
....+|++|+.+-+..+.+|. | ||. .+.|||.+|++
T Consensus 37 p~~~te~dL~~~F~~~G~~v~~v~i~~~~~rGfaFV~F~~~e~A~~Ai~ 85 (111)
T 2jvr_A 37 PEGCSWQDLKDLARENSLETTFSSVNTRDFDGTGALEFPSEEILVEALE 85 (111)
T ss_dssp SCCCCHHHHHHHHHHHTCCCSEEECSSCSSSCCEEEEESSHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHhCCeeEEEEEEcCCCCCEEEEEECCHHHHHHHHH
Confidence 457899999988877762222 2 221 37899999986
No 354
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=21.75 E-value=3.1e+02 Score=22.57 Aligned_cols=36 Identities=25% Similarity=0.162 Sum_probs=31.0
Q ss_pred CCCHHHHHHHHHhC-CCCEEEEccCCHHHHHHHhhCC
Q 025657 214 SLNWKDVKWLQTIT-SLPILVKGVLTAEDGSKLLSKE 249 (249)
Q Consensus 214 ~~tW~dl~wlr~~~-~lPivlKGIl~~eDA~~A~~~~ 249 (249)
+-+.+.|+++|+.. +.+|.+=|=.+++.+..++++|
T Consensus 158 ~~~l~ki~~lr~~~~~~~I~VdGGI~~~ti~~~~~aG 194 (227)
T 1tqx_A 158 HDMMGKVSFLRKKYKNLNIQVDGGLNIETTEISASHG 194 (227)
T ss_dssp GGGHHHHHHHHHHCTTCEEEEESSCCHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHhccCCeEEEECCCCHHHHHHHHHcC
Confidence 34678899999887 7899999999999999999887
No 355
>4a35_A Mitochondrial enolase superfamily member 1; isomerase; 1.74A {Homo sapiens}
Probab=21.70 E-value=1.8e+02 Score=26.56 Aligned_cols=123 Identities=11% Similarity=0.026 Sum_probs=69.7
Q ss_pred cCCcEEecCC--CCCCHHHHHhc-----CCCceeEEEccccChHHHHHHHHHHHHc-CCcEEEEeecCCCCCCchhh-hh
Q 025657 103 AGTIMTLSSW--ATSSVEEVSST-----GPGIRFFQLYVTKHRNVDAQLVKRAERA-GFKAIALTVDTPRLGRREAD-IK 173 (249)
Q Consensus 103 ~gi~~~lss~--ss~sleeia~~-----~~~~~wfQlY~~~d~~~~~~li~rA~~a-G~~alvvTvD~p~~g~Re~d-~r 173 (249)
.++|.--|+. ...+.|++++. ..|..-|++-+-.+.+...+.++.++++ |.. +-|.||+.. ++...+ ++
T Consensus 186 ~~~p~y~~~~g~~~~~~e~~~~~a~~~~~~Gf~~~KlKvG~~~~~d~~~v~avR~a~G~~-~~l~vDaN~-~~~~~~A~~ 263 (441)
T 4a35_A 186 QGYPAYTTSCAWLGYSDDTLKQLCAQALKDGWTRFKVKVGADLQDDMRRCQIIRDMIGPE-KTLMMDANQ-RWDVPEAVE 263 (441)
T ss_dssp HCEEEEECTTCCTTCCHHHHHHHHHHHHHTTCCEEEEECSSCHHHHHHHHHHHHHHHCTT-SEEEEECTT-CCCHHHHHH
T ss_pred cCcceEEeccccCCCCHHHHHHHHHHHHHCCCCEEEEcCCCCHHHHHHHHHHHHHHhCCC-CeEEEECCC-CCCHHHHHH
Confidence 3566554432 24577877542 1366788887766666666777777775 654 346778643 333322 11
Q ss_pred ccCCCCCccccccccccccCCCCCCCCchhhhHhhhhcCCCCCHHHHHHHHHh---CCCCEEEE-ccCCHHHHHHHhhCC
Q 025657 174 NRFVLPPHLTLKNYEGLYIGKMDKTDDSGLASYVANQIDRSLNWKDVKWLQTI---TSLPILVK-GVLTAEDGSKLLSKE 249 (249)
Q Consensus 174 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tW~dl~wlr~~---~~lPivlK-GIl~~eDA~~A~~~~ 249 (249)
.. +.+..... .++...+ ++-+++.+++|++. ++.||..= -+.+..|.+.+++.|
T Consensus 264 ~~---------~~L~~~~~------------~~iEeP~-~~~d~~~~~~l~~~l~~~~iPIa~gE~~~~~~~~~~~l~~~ 321 (441)
T 4a35_A 264 WM---------SKLAKFKP------------LWIEEPT-SPDDILGHATISKALVPLGIGIATGEQCHNRVIFKQLLQAK 321 (441)
T ss_dssp HH---------HHHGGGCC------------SEEECCS-CTTCHHHHHHHHHHHGGGTCEEEECTTCCSHHHHHHHHHTT
T ss_pred HH---------HhhcccCc------------cEEeCCC-CcccHHHHHHHHHhccCCCCCEEeCCccccHHHHHHHHHcC
Confidence 10 00100000 0111111 23467888999997 88999883 367788888877654
No 356
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=21.66 E-value=77 Score=27.28 Aligned_cols=36 Identities=28% Similarity=0.286 Sum_probs=31.0
Q ss_pred CCCHHHHHHHHHhCCCCEEEE---ccCCHHHHHHHhhCC
Q 025657 214 SLNWKDVKWLQTITSLPILVK---GVLTAEDGSKLLSKE 249 (249)
Q Consensus 214 ~~tW~dl~wlr~~~~lPivlK---GIl~~eDA~~A~~~~ 249 (249)
.-|-+|++-+|+..+.++=|| ||-+.+||..-+++|
T Consensus 200 GAT~edV~lm~~~vg~~v~VKaAGGIrt~~~al~mi~aG 238 (260)
T 3r12_A 200 GATAEDVHLMKWIVGDEMGVKASGGIRTFEDAVKMIMYG 238 (260)
T ss_dssp CCCHHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHHTT
T ss_pred CCCHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHcC
Confidence 457789999999988777777 799999999988887
No 357
>3dg3_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding; 1.60A {Mycobacterium smegmatis} PDB: 3dg6_A* 3dg7_A*
Probab=21.52 E-value=1.8e+02 Score=25.63 Aligned_cols=35 Identities=14% Similarity=0.100 Sum_probs=28.8
Q ss_pred CCHHHHHHHHHhCCCCEEEEc-cCCHHHHHHHhhCC
Q 025657 215 LNWKDVKWLQTITSLPILVKG-VLTAEDGSKLLSKE 249 (249)
Q Consensus 215 ~tW~dl~wlr~~~~lPivlKG-Il~~eDA~~A~~~~ 249 (249)
-+|+.++.|++.++.||..=+ +.+++|++.+++.|
T Consensus 223 ~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~ 258 (367)
T 3dg3_A 223 DDVLSRRRLVGQLDMPFIADESVPTPADVTREVLGG 258 (367)
T ss_dssp TSHHHHHHHHHHCSSCEEECTTCSSHHHHHHHHHHT
T ss_pred ccHHHHHHHHHhCCCCEEecCCcCCHHHHHHHHHcC
Confidence 468899999999999998765 56799999887654
No 358
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=21.51 E-value=1.4e+02 Score=25.98 Aligned_cols=21 Identities=29% Similarity=0.245 Sum_probs=17.4
Q ss_pred HHHHHHHHHHHHcCCc--EEEEe
Q 025657 139 NVDAQLVKRAERAGFK--AIALT 159 (249)
Q Consensus 139 ~~~~~li~rA~~aG~~--alvvT 159 (249)
+...+.+++|+++|++ -|++.
T Consensus 182 ~~l~~~i~~a~~~GI~~~~IilD 204 (297)
T 1tx2_A 182 ADLYDSIKIAKDAGVRDENIILD 204 (297)
T ss_dssp HHHHHHHHHHHHTTCCGGGEEEE
T ss_pred HHHHHHHHHHHHcCCChhcEEEe
Confidence 5667888999999998 67776
No 359
>4djd_C C/Fe-SP, corrinoid/iron-sulfur protein large subunit; TIM barrel, rossmann fold, B12-dependent methyltransferase; HET: B12; 2.38A {Moorella thermoacetica} PDB: 4dje_C* 4djf_C*
Probab=21.50 E-value=1.4e+02 Score=27.80 Aligned_cols=77 Identities=12% Similarity=0.110 Sum_probs=44.4
Q ss_pred ccccceeeccccccccCCChhhHHHHHHHHhc---CCcEEecCCCCCCHHHHHh---cCCCceeEEEccccChHHHHHHH
Q 025657 72 NISMPIMIAPTAFQKMAHPEGECATARAASAA---GTIMTLSSWATSSVEEVSS---TGPGIRFFQLYVTKHRNVDAQLV 145 (249)
Q Consensus 72 ~~~~Pi~iaP~g~~~l~h~~gE~~~AraA~~~---gi~~~lss~ss~sleeia~---~~~~~~wfQlY~~~d~~~~~~li 145 (249)
.+..|+.|-- + +..++++|.++ +.+++-|. ..-.+|++++ ....+.-.. ..|-+..++++
T Consensus 153 ~~dvPL~IDS--------~--dpevleaALea~a~~~plI~sa-t~dn~e~m~~lAa~y~~pVi~~---~~dl~~lkelv 218 (446)
T 4djd_C 153 ATQLNLVLMA--------D--DPDVLKEALAGVADRKPLLYAA-TGANYEAMTALAKENNCPLAVY---GNGLEELAELV 218 (446)
T ss_dssp TCCSEEEEEC--------S--CHHHHHHHHGGGGGGCCEEEEE-CTTTHHHHHHHHHHTTCCEEEE---CSSHHHHHHHH
T ss_pred hCCCCEEEec--------C--CHHHHHHHHHhhcCcCCeeEec-chhhHHHHHHHHHHcCCcEEEE---eccHHHHHHHH
Confidence 4677877742 2 23344444442 23444443 3446676653 233332221 23788899999
Q ss_pred HHHHHcCCcEEEEeecC
Q 025657 146 KRAERAGFKAIALTVDT 162 (249)
Q Consensus 146 ~rA~~aG~~alvvTvD~ 162 (249)
+++.++|++-|++.-=+
T Consensus 219 ~~a~~~GI~~IvLDPG~ 235 (446)
T 4djd_C 219 DKIVALGHKQLVLDPGA 235 (446)
T ss_dssp HHHHHTTCCCEEEECCC
T ss_pred HHHHHCCCCcEEECCCc
Confidence 99999999987665443
No 360
>2qgy_A Enolase from the environmental genome shotgun sequencing of the sargasso SEA; structural genomics, unknown function, PSI-2; 1.80A {Environmental sample}
Probab=21.38 E-value=1e+02 Score=27.50 Aligned_cols=36 Identities=8% Similarity=0.025 Sum_probs=30.5
Q ss_pred CCCHHHHHHHHHhCCCCEEEEc-cCCHHHHHHHhhCC
Q 025657 214 SLNWKDVKWLQTITSLPILVKG-VLTAEDGSKLLSKE 249 (249)
Q Consensus 214 ~~tW~dl~wlr~~~~lPivlKG-Il~~eDA~~A~~~~ 249 (249)
.-+|+.++.|++.++.||+.=+ +.+++|++++++.|
T Consensus 231 ~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~ 267 (391)
T 2qgy_A 231 GENISLLTEIKNTFNMKVVTGEKQSGLVHFRELISRN 267 (391)
T ss_dssp TTCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTT
T ss_pred hhhHHHHHHHHhhCCCCEEEcCCcCCHHHHHHHHHcC
Confidence 4579999999999999999876 55899999988754
No 361
>3qld_A Mandelate racemase/muconate lactonizing protein; structural genomics, PSI-2, isomerase; HET: MSE; 1.85A {Alicyclobacillus acidocaldarius LAA1}
Probab=21.23 E-value=1.6e+02 Score=26.37 Aligned_cols=35 Identities=17% Similarity=0.204 Sum_probs=27.6
Q ss_pred CCCHHHHHHHHHhCCCCEEEE-ccCCHHHHHHHhhC
Q 025657 214 SLNWKDVKWLQTITSLPILVK-GVLTAEDGSKLLSK 248 (249)
Q Consensus 214 ~~tW~dl~wlr~~~~lPivlK-GIl~~eDA~~A~~~ 248 (249)
.-+|+.+++|++.++.||..= -+.+.+|.+.+++.
T Consensus 226 ~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~~~ 261 (388)
T 3qld_A 226 EDDWFDLAKLQASLRTPVCLDESVRSVRELKLTARL 261 (388)
T ss_dssp TTCHHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHH
T ss_pred cccHHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHc
Confidence 446889999999999999872 36778888877754
No 362
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=21.22 E-value=80 Score=26.66 Aligned_cols=27 Identities=26% Similarity=0.421 Sum_probs=22.8
Q ss_pred HHHHHHHHhCCCCEEEE-ccCCHHHHHH
Q 025657 218 KDVKWLQTITSLPILVK-GVLTAEDGSK 244 (249)
Q Consensus 218 ~dl~wlr~~~~lPivlK-GIl~~eDA~~ 244 (249)
+.++.+|+.+++||.+= ||.++|++..
T Consensus 196 ~~v~~vr~~~~~pv~vG~GI~t~e~~~~ 223 (262)
T 2ekc_A 196 KKVEEYRELCDKPVVVGFGVSKKEHARE 223 (262)
T ss_dssp HHHHHHHHHCCSCEEEESSCCSHHHHHH
T ss_pred HHHHHHHhhcCCCEEEeCCCCCHHHHHH
Confidence 56788999999999874 6888999988
No 363
>2og9_A Mandelate racemase/muconate lactonizing enzyme; NYSGXRC, protein structure initiative (PSI) II, PSI-2, 9382A mandelate racemase; 1.90A {Polaromonas SP} PDB: 3cb3_A*
Probab=21.13 E-value=1e+02 Score=27.47 Aligned_cols=36 Identities=14% Similarity=0.170 Sum_probs=30.5
Q ss_pred CCCHHHHHHHHHhCCCCEEEEc-cCCHHHHHHHhhCC
Q 025657 214 SLNWKDVKWLQTITSLPILVKG-VLTAEDGSKLLSKE 249 (249)
Q Consensus 214 ~~tW~dl~wlr~~~~lPivlKG-Il~~eDA~~A~~~~ 249 (249)
.-+|+.++.|++.++.||+.=+ |.+++|++.+++.|
T Consensus 244 ~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~ 280 (393)
T 2og9_A 244 AYDHEGHAALALQFDTPIATGEMLTSAAEHGDLIRHR 280 (393)
T ss_dssp TTCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTT
T ss_pred cccHHHHHHHHHhCCCCEEeCCCcCCHHHHHHHHHCC
Confidence 4579999999999999999876 55899999988764
No 364
>1o1z_A GDPD, glycerophosphodiester phosphodiesterase; TM1621, glycerophosphodiester phosphodiesterase (GDPD), STRU genomics, JCSG, PSI; 1.60A {Thermotoga maritima} SCOP: c.1.18.3
Probab=21.08 E-value=2.4e+02 Score=22.95 Aligned_cols=22 Identities=14% Similarity=0.424 Sum_probs=19.1
Q ss_pred HHHHHHHHHcCCcEEEEeecCC
Q 025657 142 AQLVKRAERAGFKAIALTVDTP 163 (249)
Q Consensus 142 ~~li~rA~~aG~~alvvTvD~p 163 (249)
.+++++++++|.+..+.|||.+
T Consensus 188 ~~~v~~~~~~G~~v~~wTvn~~ 209 (234)
T 1o1z_A 188 VEVLRSFRKKGIVIFVWTLNDP 209 (234)
T ss_dssp HHHHHHHHHTTCEEEEESCCCH
T ss_pred HHHHHHHHHcCCEEEEeCCCCH
Confidence 7889999999999999998854
No 365
>3tr9_A Dihydropteroate synthase; biosynthesis of cofactors, prosthetic groups, and carriers, transferase; HET: PT1; 1.90A {Coxiella burnetii}
Probab=21.06 E-value=1.3e+02 Score=26.54 Aligned_cols=21 Identities=19% Similarity=0.374 Sum_probs=16.2
Q ss_pred HHHHHHHHHHHHcCCc--EEEEe
Q 025657 139 NVDAQLVKRAERAGFK--AIALT 159 (249)
Q Consensus 139 ~~~~~li~rA~~aG~~--alvvT 159 (249)
+...+.+++|+++|.+ -|++.
T Consensus 177 ~~l~~~i~~a~~~GI~~~~IilD 199 (314)
T 3tr9_A 177 KELQESIQRCKKAGISEDRIIID 199 (314)
T ss_dssp HHHHHHHHHHHHTTCCGGGEEEE
T ss_pred HHHHHHHHHHHHcCCCHhHEEEe
Confidence 4566888999999997 56643
No 366
>1f6y_A 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; carbon dioxide fixation, cobalamin, methyltatrahydrofolate; 2.20A {Moorella thermoacetica} SCOP: c.1.21.2 PDB: 2e7f_A* 4djd_A* 4dje_A* 4djf_A* 2ogy_A*
Probab=20.91 E-value=1.8e+02 Score=24.57 Aligned_cols=22 Identities=18% Similarity=0.295 Sum_probs=16.8
Q ss_pred HHHHHHHHHHHHcCCc--EEEEee
Q 025657 139 NVDAQLVKRAERAGFK--AIALTV 160 (249)
Q Consensus 139 ~~~~~li~rA~~aG~~--alvvTv 160 (249)
+..++++++|+++|++ -|++.-
T Consensus 138 ~~~~~~~~~a~~~Gi~~~~IilDP 161 (262)
T 1f6y_A 138 AFAMELVAAADEFGLPMEDLYIDP 161 (262)
T ss_dssp HHHHHHHHHHHHHTCCGGGEEEEC
T ss_pred HHHHHHHHHHHHCCCCcccEEEeC
Confidence 5667889999999996 566543
No 367
>3h6g_A Glutamate receptor, ionotropic kainate 2; membrane protein glycoprotein, cell junction, cell membrane, glycoprotein, ION transport; HET: NAG TLA; 2.70A {Rattus norvegicus} PDB: 3h6h_A* 3qlv_C 3qlu_C* 3qlt_A* 3olz_A*
Probab=20.89 E-value=3.2e+02 Score=23.34 Aligned_cols=64 Identities=13% Similarity=0.252 Sum_probs=43.0
Q ss_pred hHHHHHHHHhcCCcEEecCCCCCCHHHHHhcCCCceeEEEccccChHHHHHHHHHHHHcCCcEEEEeecC
Q 025657 93 ECATARAASAAGTIMTLSSWATSSVEEVSSTGPGIRFFQLYVTKHRNVDAQLVKRAERAGFKAIALTVDT 162 (249)
Q Consensus 93 E~~~AraA~~~gi~~~lss~ss~sleeia~~~~~~~wfQlY~~~d~~~~~~li~rA~~aG~~alvvTvD~ 162 (249)
-.+++..+.+.++|++..+.++..+.+ ..+.+|++. +.|......+++-++.-|.+-+.+-.|.
T Consensus 84 ~~a~~~~~~~~~ip~is~~~~~~~l~~-----~~~~~~r~~-~~~~~~~~~~~~~~~~~g~~~v~ii~d~ 147 (395)
T 3h6g_A 84 ANAVQSICNALGVPHIQTRWKHQVSDN-----KDSFYVSLY-PDFSSLSRAILDLVQFFKWKTVTVVYDD 147 (395)
T ss_dssp HHHHHHHHHHTTCCEEECSCCCCCTTC-----CCCSEEEEE-ECHHHHHHHHHHHHHHTTCSEEEEEESS
T ss_pred HHHHHHHHhcCCCCeEeeccCcccccc-----cCceEEEec-CCHHHHHHHHHHHHHHCCCeEEEEEEEC
Confidence 347889999999999965544444321 233467775 4555666677777777888877776664
No 368
>3tjl_A NADPH dehydrogenase; OLD yellow enzyme, flavin mononucleotide, TIM barrel, NADPH oxidoreductase, enone reductase; HET: FMN; 1.50A {Scheffersomyces stipitis cbs 6054} PDB: 3upw_A* 4df2_A*
Probab=20.64 E-value=16 Score=33.64 Aligned_cols=33 Identities=21% Similarity=0.101 Sum_probs=25.9
Q ss_pred CHHHHHHHHHhCCCCEEEEc-cCCHHHHHHHhhC
Q 025657 216 NWKDVKWLQTITSLPILVKG-VLTAEDGSKLLSK 248 (249)
Q Consensus 216 tW~dl~wlr~~~~lPivlKG-Il~~eDA~~A~~~ 248 (249)
.|+.++.+|+.|++|||.=| |.+++||..+++.
T Consensus 301 ~~~~~~~ir~~~~~PvI~~Ggi~~~~dA~~~i~~ 334 (407)
T 3tjl_A 301 QAGDNEFVSKIWKGVILKAGNYSYDAPEFKTLKE 334 (407)
T ss_dssp CCCCSHHHHHHCCSEEEEESCGGGGTTTTHHHHH
T ss_pred hhHHHHHHHHHhCCCEEecCCCCCHHHHHHHHHh
Confidence 35678999999999999886 6667778777654
No 369
>3td9_A Branched chain amino acid ABC transporter, peripl amino acid-binding protein; leucine binding, structural genomics; HET: MSE PHE; 1.90A {Thermotoga maritima}
Probab=20.64 E-value=2.1e+02 Score=24.10 Aligned_cols=61 Identities=15% Similarity=0.012 Sum_probs=35.8
Q ss_pred hHHHHHHHHhcCCcEEecCCCCCCHHHHHhcCCCceeEEEccccChHHHHHHHHHHHH-cCCcEEEEe
Q 025657 93 ECATARAASAAGTIMTLSSWATSSVEEVSSTGPGIRFFQLYVTKHRNVDAQLVKRAER-AGFKAIALT 159 (249)
Q Consensus 93 E~~~AraA~~~gi~~~lss~ss~sleeia~~~~~~~wfQlY~~~d~~~~~~li~rA~~-aG~~alvvT 159 (249)
-.+++..+.+.|+|++..+.++..+.+ +.+..|++.+ .|......+++.+.+ .|.+-+.+-
T Consensus 94 ~~~~~~~~~~~~iP~i~~~~~~~~~~~-----~~~~~f~~~~-~~~~~~~~~~~~l~~~~g~~~iaii 155 (366)
T 3td9_A 94 SLAIAPIAEENKVPMVTPASTNPLVTQ-----GRKFVSRVCF-IDPFQGAAMAVFAYKNLGAKRVVVF 155 (366)
T ss_dssp HHHHHHHHHHTTCCEEESSCCCGGGTT-----TCSSEEESSC-CHHHHHHHHHHHHHHTSCCCEEEEE
T ss_pred HHHHHHHHHhCCCeEEecCCCCccccC-----CCCCEEEEeC-CcHHHHHHHHHHHHHhcCCcEEEEE
Confidence 456788899999999976554332211 2345566643 344445556666644 476665544
No 370
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=20.63 E-value=2e+02 Score=23.21 Aligned_cols=84 Identities=12% Similarity=0.022 Sum_probs=44.0
Q ss_pred ccccceeeccccccccCCChhhHHHHHHHHhcCCcEE-ecCC---CCCCH---HHHHhc---CC-CceeEEEccccChHH
Q 025657 72 NISMPIMIAPTAFQKMAHPEGECATARAASAAGTIMT-LSSW---ATSSV---EEVSST---GP-GIRFFQLYVTKHRNV 140 (249)
Q Consensus 72 ~~~~Pi~iaP~g~~~l~h~~gE~~~AraA~~~gi~~~-lss~---ss~sl---eeia~~---~~-~~~wfQlY~~~d~~~ 140 (249)
+..++|.++......+ + =....+.++++|.-.+ +... ...+- +++.+. .+ ...-+..+.....+.
T Consensus 15 ~~~~klg~~~~~~~~~---~-~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~~~~~~~~ 90 (257)
T 3lmz_A 15 VNPFHLGMAGYTFVNF---D-LDTTLKTLERLDIHYLCIKDFHLPLNSTDEQIRAFHDKCAAHKVTGYAVGPIYMKSEEE 90 (257)
T ss_dssp CCSSEEEECGGGGTTS---C-HHHHHHHHHHTTCCEEEECTTTSCTTCCHHHHHHHHHHHHHTTCEEEEEEEEEECSHHH
T ss_pred CCceEEEEEEEeecCC---C-HHHHHHHHHHhCCCEEEEecccCCCCCCHHHHHHHHHHHHHcCCeEEEEeccccCCHHH
Confidence 3456777777665542 1 1245555666666543 2221 11222 344322 11 111223333366777
Q ss_pred HHHHHHHHHHcCCcEEEEe
Q 025657 141 DAQLVKRAERAGFKAIALT 159 (249)
Q Consensus 141 ~~~li~rA~~aG~~alvvT 159 (249)
.++.++.|++.|++.|++.
T Consensus 91 ~~~~i~~A~~lGa~~v~~~ 109 (257)
T 3lmz_A 91 IDRAFDYAKRVGVKLIVGV 109 (257)
T ss_dssp HHHHHHHHHHHTCSEEEEE
T ss_pred HHHHHHHHHHhCCCEEEec
Confidence 7888888888888888764
No 371
>4evy_A Aminoglycoside N(6')-acetyltransferase type 1; center for structural genomics of infectious diseases (csgid national institute of allergy and infectious diseases; HET: TOY; 1.77A {Acinetobacter haemolyticus} PDB: 4f0y_A 4e8o_A
Probab=20.47 E-value=73 Score=23.39 Aligned_cols=38 Identities=11% Similarity=-0.072 Sum_probs=24.1
Q ss_pred HHHHHHHHHHHHcCCcEEEEeecCCCCCCchhhhhccC
Q 025657 139 NVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRF 176 (249)
Q Consensus 139 ~~~~~li~rA~~aG~~alvvTvD~p~~g~Re~d~r~~~ 176 (249)
.++..+++.|++.|++.|.++++.....-+.-=.|.||
T Consensus 115 ~Ll~~~~~~a~~~g~~~i~l~~~~~N~~a~~~y~k~GF 152 (166)
T 4evy_A 115 MLIRQAEVWAKQFSCTEFASDAALDNVISHAMHRSLGF 152 (166)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEEETTCHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHcCCCEEEEecCCCCHHHHHHHHHcCC
Confidence 35556667777899999999998653222222234555
No 372
>2anu_A Hypothetical protein TM0559; predicted metal-dependent phosphoesterase (PHP famil structural genomics, joint center for structural genomics; 2.40A {Thermotoga maritima} SCOP: c.6.3.1
Probab=20.45 E-value=70 Score=26.56 Aligned_cols=21 Identities=14% Similarity=0.202 Sum_probs=18.1
Q ss_pred HHHHHHHHHHHcCCcEEEEee
Q 025657 140 VDAQLVKRAERAGFKAIALTV 160 (249)
Q Consensus 140 ~~~~li~rA~~aG~~alvvTv 160 (249)
-.++++++|++.|++.|++|=
T Consensus 36 t~ee~v~~A~~~Gl~~i~iTD 56 (255)
T 2anu_A 36 PLGEVVDLFGKHGVDVVSITD 56 (255)
T ss_dssp CHHHHHHHHHHTTCSEEEEEE
T ss_pred CHHHHHHHHHHCCCCEEEEcC
Confidence 356799999999999999983
No 373
>2wje_A CPS4B, tyrosine-protein phosphatase CPSB; capsule biogenesis/degradation, manganese, hydrolase, exopolysaccharide synthesis; 1.90A {Streptococcus pneumoniae} PDB: 2wjd_A 2wjf_A 3qy8_A
Probab=20.43 E-value=52 Score=27.23 Aligned_cols=27 Identities=22% Similarity=0.309 Sum_probs=21.3
Q ss_pred ChHHHHHHHHHHHHcCCcEEEEeecCC
Q 025657 137 HRNVDAQLVKRAERAGFKAIALTVDTP 163 (249)
Q Consensus 137 d~~~~~~li~rA~~aG~~alvvTvD~p 163 (249)
+.+.+.+++++|.+.|++.|++|==.+
T Consensus 22 ~~e~~~e~i~~A~~~Gi~~i~~TdH~~ 48 (247)
T 2wje_A 22 SREESKALLAESYRQGVRTIVSTSHRR 48 (247)
T ss_dssp SHHHHHHHHHHHHHTTEEEEECCCEEB
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCCCC
Confidence 345667899999999999999885433
No 374
>4fnq_A Alpha-galactosidase AGAB; glycoside hydrolase, hydrolase; 1.80A {Geobacillus stearothermophilus} PDB: 4fnr_A 4fnu_A* 4fnt_A* 4fns_A* 4fnp_A*
Probab=20.42 E-value=47 Score=32.71 Aligned_cols=43 Identities=19% Similarity=0.317 Sum_probs=34.0
Q ss_pred eeEEEccccChHHHHHHHHHHHHcCCcEEEEeecCCCCCCchhhh
Q 025657 128 RFFQLYVTKHRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADI 172 (249)
Q Consensus 128 ~wfQlY~~~d~~~~~~li~rA~~aG~~alvvTvD~p~~g~Re~d~ 172 (249)
.|.-.|..-|.+.+.+++++|+++||+-++| |--..|.|..|.
T Consensus 335 sW~a~~~d~~e~~i~~~ad~aa~lG~e~fvi--DDGWf~~r~~d~ 377 (729)
T 4fnq_A 335 NWEATYFDFNEEKLVNIAKTEAELGIELFVL--DDGWFGKRDDDR 377 (729)
T ss_dssp CSTTTTTCCCHHHHHHHHHHHHHHTCCEEEE--CSCCBTTCCSTT
T ss_pred ccccccccCCHHHHHHHHHHHHhcCccEEEE--cceeecCCCCCc
Confidence 3777788889999999999999999998765 665666665543
No 375
>1xx1_A Smase I, sphingomyelinase I; structure, quick cryo-soaking, activity, smase D, hydrolase; HET: EPE; 1.75A {Loxosceles laeta} PDB: 2f9r_A*
Probab=20.10 E-value=31 Score=29.24 Aligned_cols=26 Identities=23% Similarity=0.353 Sum_probs=21.7
Q ss_pred HHHHHHHHHHHHcCC--cEEEEeecCCC
Q 025657 139 NVDAQLVKRAERAGF--KAIALTVDTPR 164 (249)
Q Consensus 139 ~~~~~li~rA~~aG~--~alvvTvD~p~ 164 (249)
..+.+++++++++|. +..+.|||.+.
T Consensus 209 ~~~~~~v~~~~~~Glg~~V~~WTvn~~~ 236 (285)
T 1xx1_A 209 RLKEAIKSRDSANGFINKIYYWSVDKVS 236 (285)
T ss_dssp HHHHHHHHHTSTTCCCCEEEEECCCSHH
T ss_pred HHhHHHHHHHHhcCCCCeEEEeeCCCHH
Confidence 456788899999999 99999998753
No 376
>1yy3_A S-adenosylmethionine:tRNA ribosyltransferase- isomerase; beta-barrel, QUEA, quein queuosine, tRNA- modification; 2.88A {Bacillus subtilis}
Probab=20.09 E-value=1.6e+02 Score=26.49 Aligned_cols=109 Identities=20% Similarity=0.255 Sum_probs=48.9
Q ss_pred HHHHHhhcccceeccccCCCCCCccceeecCcccccceeeccccccccCCChhhHHHHHHHHhcCCcE-------EecCC
Q 025657 40 QENRNAFSRILFRPRILRDVSKIDMTTTVLGFNISMPIMIAPTAFQKMAHPEGECATARAASAAGTIM-------TLSSW 112 (249)
Q Consensus 40 ~~N~~af~~~~l~pr~l~~v~~~d~st~llG~~~~~Pi~iaP~g~~~l~h~~gE~~~AraA~~~gi~~-------~lss~ 112 (249)
.+-.+.+.++-|-|-.=+..++.+-==|+|-++--+ .-|||++- |=..|+ -..-++.|+-+ .+||+
T Consensus 143 ~~~L~~~G~~PLPPYI~r~~~D~erYQTVyAk~~Gs--vAAPTAGL---HFt~eL--l~~L~~kGv~~a~vTLHVG~GTF 215 (346)
T 1yy3_A 143 YEVLESLGEMPLPPYIKEQLDDKERYQTVYSKEIGS--AAAPTAGL---HFTEEI--LQQLKDKGVQIEFITLHVGLGTF 215 (346)
T ss_dssp HHHHHHHHTCCCCHHHHTTSSSCC--------------CCCCSSTT---CCCHHH--HHHHHHHTEEEEECEEESGGGGG
T ss_pred HHHHHHCCCCCCCcccCCCCCChhhchhhhcCCCCh--hhcCCCCC---CCCHHH--HHHHHHCCCeEEEEEEeecCCCC
Confidence 344444555444443322222222212345443221 34567655 443443 33344445433 46777
Q ss_pred CCCCHHHHHhcCCCceeEEEccccChHHHHHHHHHHHHcCCcEEEEee
Q 025657 113 ATSSVEEVSSTGPGIRFFQLYVTKHRNVDAQLVKRAERAGFKAIALTV 160 (249)
Q Consensus 113 ss~sleeia~~~~~~~wfQlY~~~d~~~~~~li~rA~~aG~~alvvTv 160 (249)
-....|+|.+.....-||++ . +.+.+.|++|++.|-+.|.|..
T Consensus 216 ~PV~~e~i~~H~MHsE~~~V----~-~~ta~~in~aka~G~RViAVGT 258 (346)
T 1yy3_A 216 RPVSADEVEEHNMHAEFYQM----S-EETAAALNKVRENGGRIISVGT 258 (346)
T ss_dssp C-----------CCCEEEEE----C-HHHHHHHHHHHHTTCCEEEECT
T ss_pred CCccccccccCCcccEEEEE----C-HHHHHHHHHHHHcCCeEEEEec
Confidence 77778899876555679988 3 4566899999999999887654
Done!