BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 025661
(249 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255545402|ref|XP_002513761.1| Photosystem II 22 kDa protein, chloroplast precursor, putative
[Ricinus communis]
gi|223546847|gb|EEF48344.1| Photosystem II 22 kDa protein, chloroplast precursor, putative
[Ricinus communis]
Length = 275
Score = 321 bits (822), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 197/281 (70%), Positives = 216/281 (76%), Gaps = 38/281 (13%)
Query: 1 MAQTMLLMSGVSTSHAGNLKRDSLVTFQTQMLRPKPFSHLMFNPLSNESLTAAAASSSSK 60
MAQTML MSGVST H +LKRD L+ FQ LRPKPFS L+F+PL T +++ + SK
Sbjct: 1 MAQTMLFMSGVSTRHVVDLKRDPLLQFQVDRLRPKPFSSLLFSPLP----TNSSSFAPSK 56
Query: 61 AFSTVALFKSKTKAPPKTKKVESKPKVEDGIFGTSGGFGFTKQNELFVGRVAMIGFAASL 120
F+T ALFKSK KA PK V+ K KVEDG+FGTSGG GFTKQNELFVGRVAM+GFAASL
Sbjct: 57 TFTTFALFKSKAKAAPKKTVVKPKQKVEDGVFGTSGGIGFTKQNELFVGRVAMLGFAASL 116
Query: 121 LGEGITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDEPDEPTGL 180
LGEG+TGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVD+P PTG+
Sbjct: 117 LGEGLTGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDDP--PTGI 174
Query: 181 GGAVIPPGKGLRSALGLKEG--------------------------------GKGALAQL 208
GAVIPPGKG R+ALGLKEG GKGALAQL
Sbjct: 175 EGAVIPPGKGFRAALGLKEGGPLFGFTKSNELFVGRLAQLGIAFSLIGEIITGKGALAQL 234
Query: 209 NIETGIPINEIEPLVLFNVIFFFVAALNPGTGKFVTDEDEE 249
NIETGIP+NEIEPLVLFNVIFFF AALNPGTGKFVTDE++E
Sbjct: 235 NIETGIPVNEIEPLVLFNVIFFFFAALNPGTGKFVTDEEDE 275
>gi|224063082|ref|XP_002300987.1| hypothetical protein POPTRDRAFT_816277 [Populus trichocarpa]
gi|118488707|gb|ABK96164.1| unknown [Populus trichocarpa]
gi|222842713|gb|EEE80260.1| hypothetical protein POPTRDRAFT_816277 [Populus trichocarpa]
Length = 272
Score = 317 bits (813), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 195/281 (69%), Positives = 214/281 (76%), Gaps = 41/281 (14%)
Query: 1 MAQTMLLMSGVSTSHAGNLKRDSLVTFQTQMLRPKPFSHLMFNPLSNESLTAAAASSSSK 60
MAQTM+LMSGVST +LKRD L+ FQ Q LRP PFS L++NPL +++ SSS
Sbjct: 1 MAQTMVLMSGVSTRQVVDLKRDPLLQFQVQRLRPAPFSRLLYNPLPSKA-------SSSN 53
Query: 61 AFSTVALFKSKTKAPPKTKKVESKPKVEDGIFGTSGGFGFTKQNELFVGRVAMIGFAASL 120
AF+T+ALFK +TKA PK KPKVEDGIFGTSGG GFTKQNELFVGRVAMIGFAASL
Sbjct: 54 AFTTLALFKPRTKAVPKKAAPPPKPKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASL 113
Query: 121 LGEGITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDEPDEPTGL 180
LGE ITGKGIL+QLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRG+FVD+P TG+
Sbjct: 114 LGEAITGKGILSQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGRFVDDPT--TGI 171
Query: 181 GGAVIPPGKGLRSALGLKEG--------------------------------GKGALAQL 208
GAVIPPGK R+ALGLKEG GKGALAQL
Sbjct: 172 EGAVIPPGKSFRAALGLKEGGPLFGFTKSNELFVGRLAQLGIAFSLIGEIITGKGALAQL 231
Query: 209 NIETGIPINEIEPLVLFNVIFFFVAALNPGTGKFVTDEDEE 249
NIETGIP+NEIEPLVLFNV+FFF+AALNPGTGKFVTDEDEE
Sbjct: 232 NIETGIPVNEIEPLVLFNVLFFFIAALNPGTGKFVTDEDEE 272
>gi|357463499|ref|XP_003602031.1| Photosystem II 22 kDa protein [Medicago truncatula]
gi|355491079|gb|AES72282.1| Photosystem II 22 kDa protein [Medicago truncatula]
gi|388508062|gb|AFK42097.1| unknown [Medicago truncatula]
Length = 270
Score = 316 bits (809), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 187/281 (66%), Positives = 208/281 (74%), Gaps = 43/281 (15%)
Query: 1 MAQTMLLMSGVSTSHAGNLKRDSLVTFQTQMLRPKPFSHLMFNPLSNESLTAAAASSSSK 60
MAQTMLLMS VS++++ +LK+D L+ Q Q LRP+ FS + FNPL + S SS+
Sbjct: 1 MAQTMLLMSSVSSTYSVDLKKDPLLQLQCQRLRPR-FSDVSFNPLPSNS-----KCFSSR 54
Query: 61 AFSTVALFKSKTKAPPKTKKVESKPKVEDGIFGTSGGFGFTKQNELFVGRVAMIGFAASL 120
F+T+ALFKSKTKAP K K KVEDGIFGTSGGFGFTKQNELFVGRVAMIGFAAS+
Sbjct: 55 TFTTLALFKSKTKAPAKVVKKPKP-KVEDGIFGTSGGFGFTKQNELFVGRVAMIGFAASI 113
Query: 121 LGEGITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDEPDEPTGL 180
LGE +TGKGILAQLNLETGIPIYEAEPLLLFFI+FTLLGAIGALGDRGKFVD DEP
Sbjct: 114 LGEALTGKGILAQLNLETGIPIYEAEPLLLFFIIFTLLGAIGALGDRGKFVD--DEPN-- 169
Query: 181 GGAVIPPGKGLRSALGLKEG--------------------------------GKGALAQL 208
G VIPPGKG RSALGL EG GKGALAQL
Sbjct: 170 TGGVIPPGKGFRSALGLSEGGPLFGFTKSNELFVGRLAQLGFVFSLIGEIITGKGALAQL 229
Query: 209 NIETGIPINEIEPLVLFNVIFFFVAALNPGTGKFVTDEDEE 249
NIETG+PI EIEPLVLFNVIFFF+AALNPGTG FVTD++E+
Sbjct: 230 NIETGVPITEIEPLVLFNVIFFFIAALNPGTGTFVTDDEED 270
>gi|388510160|gb|AFK43146.1| unknown [Lotus japonicus]
Length = 273
Score = 312 bits (799), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 197/282 (69%), Positives = 216/282 (76%), Gaps = 42/282 (14%)
Query: 1 MAQTMLLMSGVSTSHAGNLKRDSLVTFQTQMLRPKPFSHLMFNPL-SNESLTAAAASSSS 59
MAQTMLLMS VS+S++ +LK+D L+ Q+Q LRPK FS L FNPL SN SL SS
Sbjct: 1 MAQTMLLMSSVSSSYSVDLKKDPLLHLQSQRLRPK-FSQLSFNPLPSNSSLF------SS 53
Query: 60 KAFSTVALFKSKTKAPPKTKKVESKPKVEDGIFGTSGGFGFTKQNELFVGRVAMIGFAAS 119
+ F+T+ALFKSK KAPP K V+ KPKVEDG+FGTSGG GFTKQNELFVGRVAMIGFAAS
Sbjct: 54 RTFTTLALFKSKAKAPP-PKVVKQKPKVEDGVFGTSGGIGFTKQNELFVGRVAMIGFAAS 112
Query: 120 LLGEGITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDEPDEPTG 179
LLGE +TGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVD+ + PTG
Sbjct: 113 LLGEALTGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDD-ESPTG 171
Query: 180 LGGAVIPPGKGLRSALGLKEG--------------------------------GKGALAQ 207
L AVIPPGKGLR ALGL EG GKGALAQ
Sbjct: 172 LDKAVIPPGKGLRGALGLSEGGPLFGFTKSNELFVGRLAQLGFAFSLIGEIITGKGALAQ 231
Query: 208 LNIETGIPINEIEPLVLFNVIFFFVAALNPGTGKFVTDEDEE 249
LNIETGIPINEIEPLVLFNV FFF+AALNPGTGKFV+D+ E+
Sbjct: 232 LNIETGIPINEIEPLVLFNVAFFFIAALNPGTGKFVSDDGED 273
>gi|188509922|gb|ACD56611.1| putative photosystem II protein [Gossypioides kirkii]
Length = 277
Score = 312 bits (799), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 204/284 (71%), Positives = 220/284 (77%), Gaps = 42/284 (14%)
Query: 1 MAQTMLLMSG--VSTSHAGNLKRDS-LVTFQTQMLRPKPFSHLMFNPLSNESLTAAAASS 57
MAQTML+MS VS SH NLKRD L+ FQ Q L+PKPFSH +FNPLSN A A+S
Sbjct: 1 MAQTMLVMSSTSVSASHVVNLKRDHPLLHFQAQGLKPKPFSHFLFNPLSN-----AVAAS 55
Query: 58 SSKAFSTVALFKSKTKAPPKTKKVESKPKVEDGIFGTSGGFGFTKQNELFVGRVAMIGFA 117
SSKAF+T ALFKSKTKA PK + + KPKVEDGIFGTSGG GFTKQNELFVGRVAMIGFA
Sbjct: 56 SSKAFTTFALFKSKTKAAPKKAEPKPKPKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFA 115
Query: 118 ASLLGEGITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDEPDEP 177
ASLLGE ITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRG+FVDEP P
Sbjct: 116 ASLLGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGRFVDEP--P 173
Query: 178 TGLGGAVIPPGKGLRSALGLKEG--------------------------------GKGAL 205
TG+ GAVIPPGKG+R ALGLKEG GKGAL
Sbjct: 174 TGVEGAVIPPGKGVRGALGLKEGGPLFGFTKANELFVGRLAQLGIAFSLIGEIITGKGAL 233
Query: 206 AQLNIETGIPINEIEPLVLFNVIFFFVAALNPGTGKFVTDEDEE 249
AQLNIETGIPI++IEPLVLFNV FFF AA+NPGTGKFVTDE+E+
Sbjct: 234 AQLNIETGIPISDIEPLVLFNVAFFFAAAINPGTGKFVTDEEED 277
>gi|133902325|gb|ABO41853.1| putative photosystem II protein [Gossypium hirsutum]
Length = 278
Score = 300 bits (769), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 203/284 (71%), Positives = 216/284 (76%), Gaps = 42/284 (14%)
Query: 1 MAQTMLLMSG--VSTSHAGNLKRD-SLVTFQTQMLRPKPFSHLMFNPLSNESLTAAAASS 57
MAQTML+MS VSTSH NLKRD +L+ FQ Q L+PKP SH +FNP SN A+S
Sbjct: 1 MAQTMLVMSSTRVSTSHVVNLKRDHTLLHFQAQGLKPKPSSHFLFNPHSN-----TVAAS 55
Query: 58 SSKAFSTVALFKSKTKAPPKTKKVESKPKVEDGIFGTSGGFGFTKQNELFVGRVAMIGFA 117
SSKAF+T ALFK KTKA PK + KPKVEDGIFGTSGG GFTKQNELFVGRVAMIGFA
Sbjct: 56 SSKAFTTFALFKPKTKAAPKKAAPKPKPKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFA 115
Query: 118 ASLLGEGITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDEPDEP 177
ASLLGE ITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDEP P
Sbjct: 116 ASLLGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDEP--P 173
Query: 178 TGLGGAVIPPGKGLRSALGLKEG--------------------------------GKGAL 205
TG+ GAVIPPGKG+R ALGLKEG GKGAL
Sbjct: 174 TGIEGAVIPPGKGIRGALGLKEGGPLFGFTKANELFVGRLAQLGIAFSLIGEIITGKGAL 233
Query: 206 AQLNIETGIPINEIEPLVLFNVIFFFVAALNPGTGKFVTDEDEE 249
AQLNIETGIPI++IEPLVLFNV FFF AA+NPGTGKFVTDE EE
Sbjct: 234 AQLNIETGIPISDIEPLVLFNVAFFFFAAINPGTGKFVTDEAEE 277
>gi|225459564|ref|XP_002285857.1| PREDICTED: photosystem II 22 kDa protein, chloroplastic [Vitis
vinifera]
gi|302141814|emb|CBI19017.3| unnamed protein product [Vitis vinifera]
Length = 270
Score = 298 bits (763), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 185/281 (65%), Positives = 207/281 (73%), Gaps = 43/281 (15%)
Query: 1 MAQTMLLMSGVSTSHAGNLKRDSLVTFQTQMLRPKPFSHLMFNPLSNESLTAAAASSSSK 60
MAQTML+ VS +LKR L+ Q LRPKPFSH ++S+SS
Sbjct: 1 MAQTMLITPSVSGHSVLDLKRQPLL----QRLRPKPFSH------LLLPPLPTSSSTSSP 50
Query: 61 AFSTVALFKSKTKAPPKTKKVESKPKVEDGIFGTSGGFGFTKQNELFVGRVAMIGFAASL 120
AF+T+ALFKSKTKA P K + KP+VEDGIFGTSGG GFTK+NELFVGRVAM+GFAASL
Sbjct: 51 AFTTLALFKSKTKAAPSKKVTKPKPQVEDGIFGTSGGIGFTKKNELFVGRVAMLGFAASL 110
Query: 121 LGEGITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDEPDEPTGL 180
LGE ITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRG+FVD+ D PTG+
Sbjct: 111 LGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGRFVDD-DPPTGI 169
Query: 181 GGAVIPPGKGLRSALGLKEG--------------------------------GKGALAQL 208
GAVIPPGKGLRSALGL+EG GKGALAQL
Sbjct: 170 EGAVIPPGKGLRSALGLREGGPLFGFTKSNELFVGRLAQLGIVFSIIGEIITGKGALAQL 229
Query: 209 NIETGIPINEIEPLVLFNVIFFFVAALNPGTGKFVTDEDEE 249
NIETG+PI++IEPLVLFNVIFFF AALNPG+GKFVTD++EE
Sbjct: 230 NIETGVPISDIEPLVLFNVIFFFFAALNPGSGKFVTDDEEE 270
>gi|356509413|ref|XP_003523444.1| PREDICTED: photosystem II 22 kDa protein, chloroplastic-like
[Glycine max]
Length = 273
Score = 298 bits (762), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 192/281 (68%), Positives = 213/281 (75%), Gaps = 41/281 (14%)
Query: 1 MAQTMLLMSGVSTSHAGNLKRDSLVTFQTQMLRPKPFSHLMFNPLSNESLTAAAASSSSK 60
MAQTMLLMS VS+S++ +LK+D + Q+Q LRPK FS L FNPL ++ ++ SS +
Sbjct: 1 MAQTMLLMSSVSSSYSVDLKKDLFLQLQSQSLRPK-FSQLSFNPLP----SSTSSFSSPR 55
Query: 61 AFSTVALFKSKTKAPP-KTKKVESKPKVEDGIFGTSGGFGFTKQNELFVGRVAMIGFAAS 119
F+T+ALFKSKTKA P KTK + K KVEDGIFGTSGGFGFTKQNELFVGRVAM+GFAAS
Sbjct: 56 TFTTLALFKSKTKAAPAKTKVTKPKQKVEDGIFGTSGGFGFTKQNELFVGRVAMLGFAAS 115
Query: 120 LLGEGITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDEPDEPTG 179
LLGEGITGKGILAQLNLETGIP+YEAEPLLLFFILFTLLGAIG LGDRGKFVD DEPT
Sbjct: 116 LLGEGITGKGILAQLNLETGIPLYEAEPLLLFFILFTLLGAIGGLGDRGKFVD--DEPT- 172
Query: 180 LGGAVIPPGKGLRSALGLKEG-------------------------------GKGALAQL 208
G VIPPGKG R ALGL G GKGALAQL
Sbjct: 173 -TGGVIPPGKGFREALGLGSGPLFGFTKANELFVGRLAQLGFVFSLIGEIITGKGALAQL 231
Query: 209 NIETGIPINEIEPLVLFNVIFFFVAALNPGTGKFVTDEDEE 249
NIETG+PINEIEPLVLFNV+FFF+AALNPGTGKFVTDE E+
Sbjct: 232 NIETGVPINEIEPLVLFNVLFFFIAALNPGTGKFVTDEGED 272
>gi|217072844|gb|ACJ84782.1| unknown [Medicago truncatula]
Length = 262
Score = 298 bits (762), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 179/270 (66%), Positives = 197/270 (72%), Gaps = 43/270 (15%)
Query: 1 MAQTMLLMSGVSTSHAGNLKRDSLVTFQTQMLRPKPFSHLMFNPLSNESLTAAAASSSSK 60
MAQTMLLMS VS++++ +LK+D L+ Q Q LRP+ FS + FNPL + S SS+
Sbjct: 1 MAQTMLLMSSVSSTYSVDLKKDPLLQLQCQRLRPR-FSDVSFNPLPSNS-----KCFSSR 54
Query: 61 AFSTVALFKSKTKAPPKTKKVESKPKVEDGIFGTSGGFGFTKQNELFVGRVAMIGFAASL 120
F+T+ALFKSKTKAP K K KVEDGIFGTS GFGFTKQNELFVGRVAMIGFAAS+
Sbjct: 55 TFTTLALFKSKTKAPAKVVKKPKP-KVEDGIFGTSRGFGFTKQNELFVGRVAMIGFAASI 113
Query: 121 LGEGITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDEPDEPTGL 180
LGE +TGKGILAQLNLETGIPIYEAEPLLLFFI+FTLLGAIGALGDRGKFVD DEP
Sbjct: 114 LGEALTGKGILAQLNLETGIPIYEAEPLLLFFIIFTLLGAIGALGDRGKFVD--DEPN-- 169
Query: 181 GGAVIPPGKGLRSALGLKEG--------------------------------GKGALAQL 208
G VIPPGKG RSALGL EG GKGALAQL
Sbjct: 170 TGGVIPPGKGFRSALGLSEGGPLFGFTKSNELFVGRLAQLGFVFSLIGEIITGKGALAQL 229
Query: 209 NIETGIPINEIEPLVLFNVIFFFVAALNPG 238
NIETG+PI EIEPLVLFNVIFFF+AALNPG
Sbjct: 230 NIETGVPITEIEPLVLFNVIFFFIAALNPG 259
>gi|449465453|ref|XP_004150442.1| PREDICTED: photosystem II 22 kDa protein, chloroplastic-like
[Cucumis sativus]
gi|449529497|ref|XP_004171736.1| PREDICTED: photosystem II 22 kDa protein, chloroplastic-like
[Cucumis sativus]
Length = 272
Score = 297 bits (761), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 185/282 (65%), Positives = 205/282 (72%), Gaps = 47/282 (16%)
Query: 2 AQTMLLMSGVSTSHAGNLKRD-SLVTFQTQMLRPKPFSHLMFNPLSNESLTAAAASSSSK 60
AQTMLL SGV H LKR+ SL TQ F+ L FNPL + S+ S +
Sbjct: 3 AQTMLLTSGVCVGHGVCLKRELSLRPNYTQ------FTRLFFNPLPSHSV-----SLPPR 51
Query: 61 AFSTVALFKSKTKAPPKTKKVES-KPKVEDGIFGTSGGFGFTKQNELFVGRVAMIGFAAS 119
F+T+A+FKS+TKAPPK KVE K KVEDGIFGTSGG GFTKQNELFVGRVAMIGFAAS
Sbjct: 52 GFTTLAVFKSRTKAPPK--KVEKPKQKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAAS 109
Query: 120 LLGEGITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDEPDEPTG 179
+LGE ITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKF+D+P+ TG
Sbjct: 110 ILGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATG 169
Query: 180 LGGAVIPPGKGLRSALGLKEG--------------------------------GKGALAQ 207
L AVIPPGK RSALGLKEG GKGALAQ
Sbjct: 170 LERAVIPPGKSFRSALGLKEGGPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQ 229
Query: 208 LNIETGIPINEIEPLVLFNVIFFFVAALNPGTGKFVTDEDEE 249
LNIETG+PINEIEPLVL NV+FFF+AA+NPGTGKFVTDE+++
Sbjct: 230 LNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDD 271
>gi|255645594|gb|ACU23291.1| unknown [Glycine max]
Length = 273
Score = 297 bits (761), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 192/281 (68%), Positives = 213/281 (75%), Gaps = 41/281 (14%)
Query: 1 MAQTMLLMSGVSTSHAGNLKRDSLVTFQTQMLRPKPFSHLMFNPLSNESLTAAAASSSSK 60
MAQTMLLMS VS+S++ +LK+D + Q+Q LRPK FS L FNPL ++ ++ SS +
Sbjct: 1 MAQTMLLMSSVSSSYSVDLKKDLFLQLQSQSLRPK-FSQLSFNPLP----SSTSSFSSPR 55
Query: 61 AFSTVALFKSKTKAPP-KTKKVESKPKVEDGIFGTSGGFGFTKQNELFVGRVAMIGFAAS 119
F+T+ALFKSKTKA P KTK + K KVEDGIFGTSGGFGFTKQNELFVGRVAM+GFAAS
Sbjct: 56 TFTTLALFKSKTKAAPAKTKVTKPKQKVEDGIFGTSGGFGFTKQNELFVGRVAMLGFAAS 115
Query: 120 LLGEGITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDEPDEPTG 179
LLGEGITGKGILAQLNLETGIP+YEAEPLLLFFILFTLLGAIG LGDRGKFVD DEPT
Sbjct: 116 LLGEGITGKGILAQLNLETGIPLYEAEPLLLFFILFTLLGAIGGLGDRGKFVD--DEPT- 172
Query: 180 LGGAVIPPGKGLRSALGLKEG-------------------------------GKGALAQL 208
G VIPPGKG R ALGL G GKGALAQL
Sbjct: 173 -TGGVIPPGKGFREALGLGSGPLFGFTKANEPFVGRLAQLGFVFSLIGEIITGKGALAQL 231
Query: 209 NIETGIPINEIEPLVLFNVIFFFVAALNPGTGKFVTDEDEE 249
NIETG+PINEIEPLVLFNV+FFF+AALNPGTGKFVTDE E+
Sbjct: 232 NIETGVPINEIEPLVLFNVLFFFIAALNPGTGKFVTDEGED 272
>gi|356515892|ref|XP_003526631.1| PREDICTED: photosystem II 22 kDa protein, chloroplastic-like
[Glycine max]
Length = 273
Score = 291 bits (744), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 189/281 (67%), Positives = 209/281 (74%), Gaps = 41/281 (14%)
Query: 1 MAQTMLLMSGVSTSHAGNLKRDSLVTFQTQMLRPKPFSHLMFNPLSNESLTAAAASSSSK 60
MAQTMLLMS VS+S++ +LK+D + Q+Q LRPK FS L FN + ++ SS +
Sbjct: 1 MAQTMLLMSSVSSSYSVDLKKDLFLQLQSQSLRPK-FSQLSFN----PLPPSTSSFSSPR 55
Query: 61 AFSTVALFKSKTKAPP-KTKKVESKPKVEDGIFGTSGGFGFTKQNELFVGRVAMIGFAAS 119
F+T+ALFKSKTKA P KTK + K KVEDGIFGTSGGFGFTKQNELFVGRVAM+GFAAS
Sbjct: 56 TFTTLALFKSKTKAAPAKTKVTKPKQKVEDGIFGTSGGFGFTKQNELFVGRVAMLGFAAS 115
Query: 120 LLGEGITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDEPDEPTG 179
LLGEGITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIG LGDRGKFVD DEPT
Sbjct: 116 LLGEGITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGGLGDRGKFVD--DEPT- 172
Query: 180 LGGAVIPPGKGLRSALGLKEG-------------------------------GKGALAQL 208
G VIP GKG R ALGL G GKGALAQL
Sbjct: 173 -TGGVIPSGKGFREALGLGSGPLFGFTKANELFVGRLAQLGFVFSLIGEIITGKGALAQL 231
Query: 209 NIETGIPINEIEPLVLFNVIFFFVAALNPGTGKFVTDEDEE 249
NIETG+PINEIEPLVLFNV+FFF+AALNPGTGKFVTD+ E+
Sbjct: 232 NIETGVPINEIEPLVLFNVLFFFIAALNPGTGKFVTDDGED 272
>gi|255638809|gb|ACU19708.1| unknown [Glycine max]
Length = 273
Score = 288 bits (737), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 188/281 (66%), Positives = 208/281 (74%), Gaps = 41/281 (14%)
Query: 1 MAQTMLLMSGVSTSHAGNLKRDSLVTFQTQMLRPKPFSHLMFNPLSNESLTAAAASSSSK 60
MAQTMLLMS VS+S++ +LK+D + Q+Q LRPK FS L FN + ++ SS +
Sbjct: 1 MAQTMLLMSSVSSSYSVDLKKDLFLQLQSQSLRPK-FSQLSFN----PLPPSTSSFSSPR 55
Query: 61 AFSTVALFKSKTKAPP-KTKKVESKPKVEDGIFGTSGGFGFTKQNELFVGRVAMIGFAAS 119
F+T+ALFKSKTKA P KTK + K KVEDGIFGTSGGFGFTKQNELFVGRVAM+GFAAS
Sbjct: 56 TFTTLALFKSKTKAAPAKTKVTKPKQKVEDGIFGTSGGFGFTKQNELFVGRVAMLGFAAS 115
Query: 120 LLGEGITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDEPDEPTG 179
LLGEGITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIG LGDRGKFVD DEPT
Sbjct: 116 LLGEGITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGGLGDRGKFVD--DEPT- 172
Query: 180 LGGAVIPPGKGLRSALGLKEG-------------------------------GKGALAQL 208
G VIP GKG R ALGL G GKGALAQL
Sbjct: 173 -TGGVIPSGKGFREALGLGSGPLFGFTKANELFVGRLAQLGFVSSLIGEIITGKGALAQL 231
Query: 209 NIETGIPINEIEPLVLFNVIFFFVAALNPGTGKFVTDEDEE 249
NIETG+PINEIEPLVLFNV+FFF+AALNPGTGKFVT + E+
Sbjct: 232 NIETGVPINEIEPLVLFNVLFFFIAALNPGTGKFVTGDGED 272
>gi|133902304|gb|ABO41835.1| putative photosystem II protein [Gossypium raimondii]
Length = 278
Score = 282 bits (722), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 200/284 (70%), Positives = 214/284 (75%), Gaps = 42/284 (14%)
Query: 1 MAQTMLLMSGVSTSHAG--NLKRD-SLVTFQTQMLRPKPFSHLMFNPLSNESLTAAAASS 57
MAQTML+MS S S + NLKRD +L+ FQ Q L+PKP SH +FNP SN A+S
Sbjct: 1 MAQTMLVMSSTSVSTSHVVNLKRDHTLLHFQAQGLKPKPSSHFLFNPHSN-----TVAAS 55
Query: 58 SSKAFSTVALFKSKTKAPPKTKKVESKPKVEDGIFGTSGGFGFTKQNELFVGRVAMIGFA 117
SSKAF+T ALFK KTKA PK + KPKVEDGIFGTSGG GFTKQNELFVGRVAMIGFA
Sbjct: 56 SSKAFTTFALFKPKTKAAPKKAAPKPKPKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFA 115
Query: 118 ASLLGEGITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDEPDEP 177
ASLLGE ITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDEP P
Sbjct: 116 ASLLGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDEP--P 173
Query: 178 TGLGGAVIPPGKGLRSALGLKEG--------------------------------GKGAL 205
TG+ GAVIPPGKG+R ALGLKEG GKGAL
Sbjct: 174 TGIEGAVIPPGKGIRGALGLKEGGPLFGFTKANELFVGRLAQLGIAFSLIGEIITGKGAL 233
Query: 206 AQLNIETGIPINEIEPLVLFNVIFFFVAALNPGTGKFVTDEDEE 249
AQLNIETGIPI++IEPLVLFNV FFF AA+NPGTGKFVTDE EE
Sbjct: 234 AQLNIETGIPISDIEPLVLFNVAFFFFAAINPGTGKFVTDEAEE 277
>gi|400890|sp|Q02060.1|PSBS_SPIOL RecName: Full=Photosystem II 22 kDa protein, chloroplastic;
AltName: Full=CP22; Flags: Precursor
gi|21307|emb|CAA48557.1| 22kD-protein of PSII [Spinacia oleracea]
gi|260917|gb|AAB24338.1| photosystem II 22 kda polypeptide [Spinacia oleracea]
Length = 274
Score = 281 bits (719), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 181/284 (63%), Positives = 206/284 (72%), Gaps = 46/284 (16%)
Query: 1 MAQTMLLM-SGVSTSHAGNLKRDSLVTFQTQMLRPKPFSHLMFNPLSNESLTAAAASSSS 59
MAQ MLLM GVST++ +LKR++L+ Q Q ++PK + SN + +SSSS
Sbjct: 1 MAQAMLLMMPGVSTTNTIDLKRNALLKLQIQKIKPK-------SSTSNLFFSPLPSSSSS 53
Query: 60 K--AFSTVALFKSKTKAPPKTKKVESKPKVEDGIFGTSGGFGFTKQNELFVGRVAMIGFA 117
F T+ALFKSK KAP K +K K KVEDG+FGTSGG GFTK+NELFVGRVAMIGFA
Sbjct: 54 SSTVFKTLALFKSKAKAPKKVEK--PKLKVEDGLFGTSGGIGFTKENELFVGRVAMIGFA 111
Query: 118 ASLLGEGITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDEPDEP 177
ASLLGEGITGKGIL+QLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRG+FVDEP
Sbjct: 112 ASLLGEGITGKGILSQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGRFVDEPT-- 169
Query: 178 TGLGGAVIPPGKGLRSALGLKEG--------------------------------GKGAL 205
TGL AVIPPGK +RSALGLK GKGAL
Sbjct: 170 TGLEKAVIPPGKDVRSALGLKTKGPLFGFTKSNELFVGRLAQLGFAFSLIGEIITGKGAL 229
Query: 206 AQLNIETGIPINEIEPLVLFNVIFFFVAALNPGTGKFVTDEDEE 249
AQLNIETG+PINEIEPLVL NV+FFF+AA+NPGTGKF+TD++EE
Sbjct: 230 AQLNIETGVPINEIEPLVLLNVVFFFIAAINPGTGKFITDDEEE 273
>gi|106879623|emb|CAJ38395.1| Photosystem II, 22 kDa Protein [Plantago major]
Length = 262
Score = 279 bits (714), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 174/280 (62%), Positives = 197/280 (70%), Gaps = 49/280 (17%)
Query: 1 MAQTMLLMSGVSTSHAGNLKRDSLVTFQTQMLRPKPFSHLMFNPLSNESLTAAAASSSSK 60
MAQTMLL + VS +LK + + + +PK FS+ + P +N S S
Sbjct: 1 MAQTMLLSANVSA----HLKSEQPLI---KTFKPKAFSNFVLPPRTN--------VSRSL 45
Query: 61 AFSTVALFKSKTKAPPKTKKVESKPKVEDGIFGTSGGFGFTKQNELFVGRVAMIGFAASL 120
F+T ALFKSKTKAP K V+ KPKVEDGIFGTSGG GFTKQNELFVGRVAMIGFAASL
Sbjct: 46 PFTTYALFKSKTKAPTKAPVVKEKPKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASL 105
Query: 121 LGEGITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDEPDEPTGL 180
LGE ITGKGILAQLNLETGIPI+EAEPLLLFFILF LLGAIGALGDRG+FV DEPTGL
Sbjct: 106 LGEAITGKGILAQLNLETGIPIFEAEPLLLFFILFNLLGAIGALGDRGRFV---DEPTGL 162
Query: 181 GGAVIPPGKGLRSALGLKEG-------------------------------GKGALAQLN 209
AVI PGKG R+ALGL G GKGALAQLN
Sbjct: 163 DKAVIAPGKGFRAALGLGSGPLFGFTKANELFVGRLAQLGIAFSIIGEIVTGKGALAQLN 222
Query: 210 IETGIPINEIEPLVLFNVIFFFVAALNPGTGKFVTDEDEE 249
+ETG+PI E+EPL+LFN++FFFVAA+NPGTGKFVTDE+E+
Sbjct: 223 VETGVPIGELEPLLLFNIVFFFVAAINPGTGKFVTDEEED 262
>gi|115441299|ref|NP_001044929.1| Os01g0869800 [Oryza sativa Japonica Group]
gi|15408693|dbj|BAB64099.1| putative photosystem II subunit PsbS [Oryza sativa Japonica Group]
gi|20160872|dbj|BAB89811.1| putative photosystem II subunit PsbS [Oryza sativa Japonica Group]
gi|113534460|dbj|BAF06843.1| Os01g0869800 [Oryza sativa Japonica Group]
gi|125528521|gb|EAY76635.1| hypothetical protein OsI_04589 [Oryza sativa Indica Group]
gi|125572786|gb|EAZ14301.1| hypothetical protein OsJ_04227 [Oryza sativa Japonica Group]
gi|215701291|dbj|BAG92715.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737433|dbj|BAG96563.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215764949|dbj|BAG86646.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 268
Score = 268 bits (685), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 178/285 (62%), Positives = 196/285 (68%), Gaps = 53/285 (18%)
Query: 1 MAQTMLLMSGVSTSHAGNLKRDSLVTFQTQMLRPKPFSHLMFNPLSNESLTAAAASSSSK 60
MAQ+ML+ T A + R Q +RP PFS L+ LS S + A S
Sbjct: 1 MAQSMLVSGANGTVAAASTSR-------LQPVRPTPFSRLV---LSQPSSSLGRAVS--- 47
Query: 61 AFSTVALF-KSKTKAPPKTKKVESKPK--VEDGIFGTSGGFGFTKQNELFVGRVAMIGFA 117
TVALF +SKTKA P +K E KPK EDGIFGTSGG GFTK+NELFVGRVAM+GFA
Sbjct: 48 -VKTVALFGRSKTKAAP-ARKAEPKPKFKTEDGIFGTSGGIGFTKENELFVGRVAMLGFA 105
Query: 118 ASLLGEGITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDEPDEP 177
AS+LGE ITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRG FVD D+P
Sbjct: 106 ASILGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGSFVD--DQP 163
Query: 178 -TGLGGAVIPPGKGLRSALGLKEG--------------------------------GKGA 204
TGL AVI PGKG RSALGL EG GKGA
Sbjct: 164 VTGLDKAVIAPGKGFRSALGLSEGGPLFGFTKANELFVGRLAQLGIAFSIIGEIITGKGA 223
Query: 205 LAQLNIETGIPINEIEPLVLFNVIFFFVAALNPGTGKFVTDEDEE 249
LAQLNIETG+PINEIEPLVLFNV+FFF+AA+NPGTGKFV+D+DEE
Sbjct: 224 LAQLNIETGVPINEIEPLVLFNVVFFFIAAINPGTGKFVSDDDEE 268
>gi|326494250|dbj|BAJ90394.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326523967|dbj|BAJ96994.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 271
Score = 261 bits (668), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 173/282 (61%), Positives = 194/282 (68%), Gaps = 44/282 (15%)
Query: 1 MAQTMLLMSGVSTSHAGNLKRDSLVTFQTQMLRPKPFSHLMFNPLSNESLTAAAASSSSK 60
MAQ+ML MSGV+ +G SL+ Q RP S + S A S
Sbjct: 1 MAQSML-MSGVNGVASGR----SLL----QAARPSSASTPFSRLALSSSSAAYYKHMPSL 51
Query: 61 AFSTVALF-KSKTKAPPKTKKVESKPKVEDGIFGTSGGFGFTKQNELFVGRVAMIGFAAS 119
+ T+ALF KSKTKA P K V KPK EDGIFGTSGG GFTK+NELFVGRVAMIGFAAS
Sbjct: 52 SVRTMALFGKSKTKAAPAKKVVAPKPKTEDGIFGTSGGIGFTKENELFVGRVAMIGFAAS 111
Query: 120 LLGEGITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDEPDEPTG 179
+LGE ITGKGIL+QLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRG+FVDE +PTG
Sbjct: 112 ILGEAITGKGILSQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGRFVDE--QPTG 169
Query: 180 LGGAVIPPGKGLRSALGLKEG--------------------------------GKGALAQ 207
L AVI PGKG RSALGL EG GKGALAQ
Sbjct: 170 LDKAVIAPGKGFRSALGLSEGGPLFGFTKSNELFVGRLAQLGIAFSIIGEIITGKGALAQ 229
Query: 208 LNIETGIPINEIEPLVLFNVIFFFVAALNPGTGKFVTDEDEE 249
LNIETG+PI+EIEPLVLFNV+FFF+AA+NPGTGKF++ ED++
Sbjct: 230 LNIETGVPISEIEPLVLFNVVFFFIAAINPGTGKFISGEDDD 271
>gi|116778734|gb|ABK20973.1| unknown [Picea sitchensis]
Length = 297
Score = 260 bits (665), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 172/297 (57%), Positives = 198/297 (66%), Gaps = 49/297 (16%)
Query: 1 MAQTMLLMSGVSTSHAG----NLKR----DSLVTFQTQMLRPKPFSHLMFNPLSNESLTA 52
MAQ++L G+S+ AG N + +L + +RP + + ++PL+ E +A
Sbjct: 1 MAQSVLASGGLSSCVAGIAGFNQRPLPSPPALPVARGLRIRPPNAAQISWSPLT-ELPSA 59
Query: 53 AAASSSSKAFSTVALFKSKTKA--PPKTKKV------ESKPKVEDGIFGTSGGFGFTKQN 104
AA +++ T ALF+ K KA PPK + E KPKVEDGIFGTSGG GFTK N
Sbjct: 60 NAAGLNARIARTEALFRPKEKAAAPPKKGRTGRVALPEEKPKVEDGIFGTSGGIGFTKAN 119
Query: 105 ELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGAL 164
ELFVGRVAMIGFAASLLGE ITGKGIL+QLNLETGIPIYEAEPLLLFFILFTLLGAIGAL
Sbjct: 120 ELFVGRVAMIGFAASLLGEAITGKGILSQLNLETGIPIYEAEPLLLFFILFTLLGAIGAL 179
Query: 165 GDRGKFVDEPDEPTGLGGAVIPPGKGLRSALGLKEG------------------------ 200
GDRGKFVD+ TGL AVIPPGKG RSA+GL E
Sbjct: 180 GDRGKFVDDQTPTTGLEKAVIPPGKGFRSAVGLNESGPLFGFTKSNELFVGRLAQLGIAF 239
Query: 201 --------GKGALAQLNIETGIPINEIEPLVLFNVIFFFVAALNPGTGKFVTDEDEE 249
GKGALAQLNIETG+P++EIEPLVLFNV FF AALNPG GKFVTDE+EE
Sbjct: 240 SIIGEIITGKGALAQLNIETGVPVSEIEPLVLFNVAFFLFAALNPGNGKFVTDEEEE 296
>gi|84620804|gb|ABC59516.1| chloroplast photosystem II 22 kDa component [Nicotiana benthamiana]
gi|186926676|gb|ACC95540.1| chloroplast photosystem II 22 kDa component [Nicotiana benthamiana]
Length = 277
Score = 259 bits (663), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 180/284 (63%), Positives = 202/284 (71%), Gaps = 42/284 (14%)
Query: 1 MAQTMLLMSGVSTSHAGNLKRDSLVTFQTQMLRPKPFSHLMFNPLSNESLTAAAASSSSK 60
MAQTMLL + ++SLV + L+PKP S LS + +A+++SSSS
Sbjct: 1 MAQTMLLTANAKVDLR---SKESLV----ERLKPKPLSSFFLPSLSLKYPSASSSSSSSS 53
Query: 61 AF---STVALFKSKTKAPPKTKKVESKPKVEDGIFGTSGGFGFTKQNELFVGRVAMIGFA 117
+ +TVALFKSK KAP K + K KVEDGIFGTSGG GFTKQNELFVGRVAMIGFA
Sbjct: 54 SHFTSTTVALFKSKAKAPAKKVVPKPKEKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFA 113
Query: 118 ASLLGEGITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDEPDEP 177
ASLLGE ITGKGILAQLNLETGIPIYEAEPLLLFFILF LLGAIGALGDRGKF+D+P P
Sbjct: 114 ASLLGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFNLLGAIGALGDRGKFIDDPTPP 173
Query: 178 TGLGGAVIPPGKGLRSALGLKEG--------------------------------GKGAL 205
TGL AVIPPGKG +SALGL EG GKGAL
Sbjct: 174 TGLDKAVIPPGKGFKSALGLSEGGPLFGFTKANELFVGRLAQLGIAFSIIGEIITGKGAL 233
Query: 206 AQLNIETGIPINEIEPLVLFNVIFFFVAALNPGTGKFVTDEDEE 249
AQLN ETG+PINEIEPL+LFN++FFFVAA+NPGTGKFVTDE+EE
Sbjct: 234 AQLNFETGVPINEIEPLLLFNIVFFFVAAINPGTGKFVTDEEEE 277
>gi|18203444|sp|Q9SMB4.1|PSBS_TOBAC RecName: Full=Photosystem II 22 kDa protein, chloroplastic;
AltName: Full=CP22; Flags: Precursor
gi|6103011|emb|CAA59007.1| precursor of photosystem II subunit (22KDa) [Nicotiana tabacum]
Length = 274
Score = 259 bits (661), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 177/281 (62%), Positives = 198/281 (70%), Gaps = 39/281 (13%)
Query: 1 MAQTMLLMSGVSTSHAGNLKRDSLVTFQTQMLRPKPFSHLMFNPLSNESLTAAAASSSSK 60
MAQTMLL + ++SLV + L+PKP S L + +A+A++SS
Sbjct: 1 MAQTMLLTANAKVDLR---SKESLV----ERLKPKPLSSFFLPSLPLKYPSASASASSHF 53
Query: 61 AFSTVALFKSKTKAPPKTKKVESKPKVEDGIFGTSGGFGFTKQNELFVGRVAMIGFAASL 120
+TVALFKSK KAP K + K KVEDGIFGTSGG GFTKQNELFVGRVAMIGFAASL
Sbjct: 54 TSTTVALFKSKAKAPAKKVVPKPKEKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASL 113
Query: 121 LGEGITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDEPDEPTGL 180
LGE ITGKGILAQLNLETGIPIYEAEPLLLFFILF LLGAIGAL DRGKF+D+P PTGL
Sbjct: 114 LGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFNLLGAIGALEDRGKFIDDPAPPTGL 173
Query: 181 GGAVIPPGKGLRSALGLKEG--------------------------------GKGALAQL 208
AVIPPGKG +SALGL EG GKGALAQL
Sbjct: 174 DKAVIPPGKGFKSALGLSEGGPLFEFTKANELFVGRLAQLGIAFSIIGEIITGKGALAQL 233
Query: 209 NIETGIPINEIEPLVLFNVIFFFVAALNPGTGKFVTDEDEE 249
N ETG+PINEIEPL+LFN++FFFVAA+NPGTGKFVTDE+EE
Sbjct: 234 NFETGVPINEIEPLLLFNIVFFFVAAINPGTGKFVTDEEEE 274
>gi|84620802|gb|ABC59515.1| chloroplast photosystem II 22 kDa component [Nicotiana benthamiana]
Length = 274
Score = 254 bits (648), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 176/281 (62%), Positives = 197/281 (70%), Gaps = 39/281 (13%)
Query: 1 MAQTMLLMSGVSTSHAGNLKRDSLVTFQTQMLRPKPFSHLMFNPLSNESLTAAAASSSSK 60
MAQTMLL + ++ LV + L+PKP S L + +A+++SSS
Sbjct: 1 MAQTMLLTANAKVDLR---NKEPLV----ERLKPKPLSSFFLPSLPLKYPSASSSSSSHF 53
Query: 61 AFSTVALFKSKTKAPPKTKKVESKPKVEDGIFGTSGGFGFTKQNELFVGRVAMIGFAASL 120
+TVALFKSK KAP K + K KVEDGIFGTSGG GFTKQNELFVGRVAMIGFAASL
Sbjct: 54 TSTTVALFKSKAKAPAKKVVPKPKEKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASL 113
Query: 121 LGEGITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDEPDEPTGL 180
LGE ITGKGILAQLNLETGIPIYEAEPLLLFFILF LLGAIGALGDRGKF+D+P TGL
Sbjct: 114 LGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFNLLGAIGALGDRGKFIDDPVPATGL 173
Query: 181 GGAVIPPGKGLRSALGLKEG--------------------------------GKGALAQL 208
AVIPPGKG +SALGL EG GKGALAQL
Sbjct: 174 DKAVIPPGKGFKSALGLSEGGPLFGFTKANELFVGRLAQLGIAFSIIGEIITGKGALAQL 233
Query: 209 NIETGIPINEIEPLVLFNVIFFFVAALNPGTGKFVTDEDEE 249
N ETG+PINEIEPL+LFN++FFFVAA+NPGTGKFVTDE+EE
Sbjct: 234 NFETGVPINEIEPLLLFNIVFFFVAAINPGTGKFVTDEEEE 274
>gi|116790851|gb|ABK25763.1| unknown [Picea sitchensis]
Length = 294
Score = 249 bits (636), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 160/258 (62%), Positives = 177/258 (68%), Gaps = 45/258 (17%)
Query: 32 LRPKPFSHLMFNPLSNESLTAAAASSSSKAFSTVALFKSKTKA--PPKTKKV------ES 83
+RP + ++PL E +A AA +++ +TVALF+ K KA PPK + E
Sbjct: 40 IRPPNAAETSWSPL-RELPSANAAGLNARTANTVALFRPKEKAAAPPKKGRTGRVSVPEE 98
Query: 84 KPKVEDGIFGTSGGFGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGIPIY 143
KPKVEDGIFGTSGG GFTK NELFVGRVAMIGFAASLLGE ITGKGILAQLNLETGIPIY
Sbjct: 99 KPKVEDGIFGTSGGIGFTKANELFVGRVAMIGFAASLLGEAITGKGILAQLNLETGIPIY 158
Query: 144 EAEPLLLFFILFTLLGAIGALGDRGKFVDEPDEPTGLGGAVIPPGKGLRSALGLKEG--- 200
EAEPLLLFFILFTLLGAIGALGDRGKFVDE P L + PGKG RSA+GLK+
Sbjct: 159 EAEPLLLFFILFTLLGAIGALGDRGKFVDEAPTPDSL----VDPGKGFRSAVGLKDSGPL 214
Query: 201 -----------------------------GKGALAQLNIETGIPINEIEPLVLFNVIFFF 231
GKGALAQLNIETG+P++EIEPLVLFNV FF
Sbjct: 215 FGFTKSNELFVGRLAQLGIAFSIIGEIITGKGALAQLNIETGVPVSEIEPLVLFNVAFFL 274
Query: 232 VAALNPGTGKFVTDEDEE 249
AALNPG GKFVTD DEE
Sbjct: 275 FAALNPGNGKFVTDVDEE 292
>gi|340002457|gb|AEK26371.1| chloroplast photosystem II subunit [Sedum alfredii]
Length = 273
Score = 249 bits (635), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 177/283 (62%), Positives = 197/283 (69%), Gaps = 44/283 (15%)
Query: 1 MAQTMLLMSGVSTSHAGNLKRDSLVTFQTQMLRPKPFSHLMFNPLSNESLTAAAASSSSK 60
MAQ+ LLM + K S + Q Q L + + PL L + A+S
Sbjct: 1 MAQSTLLMFNGALP---TFKTHSSLQSQIQRLVKPNNNPFLQTPL----LHSKASSPLGL 53
Query: 61 AFSTVALFKSKTKAPPKTKKVESKPK--VEDGIFGTSGGFGFTKQNELFVGRVAMIGFAA 118
F+TVALFK+K KAP K+ +SKPK VEDG+FGTSGG GFTKQNELFVGRVAMIGFAA
Sbjct: 54 GFTTVALFKAKAKAP-AKKETKSKPKLKVEDGVFGTSGGIGFTKQNELFVGRVAMIGFAA 112
Query: 119 SLLGEGITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDEPDEPT 178
S+LGE +TGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRG+FVD+P PT
Sbjct: 113 SILGEAVTGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGRFVDDP--PT 170
Query: 179 GLGGAVIPPGKGLRSALGLKEG--------------------------------GKGALA 206
GL AVIPPGKGLRSA GL EG GKGALA
Sbjct: 171 GLEKAVIPPGKGLRSAFGLSEGGPLFGFTKSNELFVGRLAQLGFAFSLIGEIITGKGALA 230
Query: 207 QLNIETGIPINEIEPLVLFNVIFFFVAALNPGTGKFVTDEDEE 249
QLNIETG+PINEIEPLVLFNVIFFF AALNPGTGKFVTD++E+
Sbjct: 231 QLNIETGVPINEIEPLVLFNVIFFFFAALNPGTGKFVTDDEED 273
>gi|15219418|ref|NP_175092.1| photosystem II 22 kDa protein [Arabidopsis thaliana]
gi|17380270|sp|Q9XF91.1|PSBS_ARATH RecName: Full=Photosystem II 22 kDa protein, chloroplastic;
AltName: Full=CP22; Flags: Precursor
gi|4741962|gb|AAD28778.1|AF134131_1 PsbS protein [Arabidopsis thaliana]
gi|13876505|gb|AAK43481.1|AC084807_6 photosystem II 22kDa protein, putative [Arabidopsis thaliana]
gi|62320751|dbj|BAD95419.1| Photosystem II chlorophyll-binding protein PsbS [Arabidopsis
thaliana]
gi|332193918|gb|AEE32039.1| photosystem II 22 kDa protein [Arabidopsis thaliana]
Length = 265
Score = 247 bits (631), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 176/282 (62%), Positives = 193/282 (68%), Gaps = 51/282 (18%)
Query: 1 MAQTMLLMSGVSTSHAGNLKRDSLVTFQTQMLRPKPFSHLMFNPLSNESLTAAAASSSSK 60
MAQTMLL SGV+ H + ++ + +PK H +F LS S A S +
Sbjct: 1 MAQTMLLTSGVTAGH--------FLRNKSPLAQPK--VHHLF--LSGNS--PVALPSRRQ 46
Query: 61 AFSTVALFKSKTKAPPKTKKVES-KPKVEDGIFGTSGGFGFTKQNELFVGRVAMIGFAAS 119
+F +ALFK KTKA KKVE K KVEDGIFGTSGG GFTK NELFVGRVAMIGFAAS
Sbjct: 47 SFVPLALFKPKTKA--APKKVEKPKSKVEDGIFGTSGGIGFTKANELFVGRVAMIGFAAS 104
Query: 120 LLGEGITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDEPDEPTG 179
LLGE +TGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVD+P PTG
Sbjct: 105 LLGEALTGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDDP--PTG 162
Query: 180 LGGAVIPPGKGLRSALGLKEG--------------------------------GKGALAQ 207
L AVIPPGK +RSALGLKE GKGALAQ
Sbjct: 163 LEKAVIPPGKNVRSALGLKEQGPLFGFTKANELFVGRLAQLGIAFSLIGEIITGKGALAQ 222
Query: 208 LNIETGIPINEIEPLVLFNVIFFFVAALNPGTGKFVTDEDEE 249
LNIETGIPI +IEPLVL NV FFF AA+NPG GKF+TD+ EE
Sbjct: 223 LNIETGIPIQDIEPLVLLNVAFFFFAAINPGNGKFITDDGEE 264
>gi|255764547|gb|ACU33835.1| PsbS protein [Phyllostachys edulis]
Length = 269
Score = 246 bits (628), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 162/255 (63%), Positives = 176/255 (69%), Gaps = 43/255 (16%)
Query: 30 QMLRPKPFSHLMFNPLSNESLTAAAASSSSKAFSTVALFK-SKTKAPPKTKKVESKPK-- 86
+RP P S + + S S A S K TVALF +K E+KPK
Sbjct: 23 HAVRPTPLSRFVLS--SQPSYCKRMAPLSVK---TVALFGGKSKAKAAPARKAETKPKFK 77
Query: 87 VEDGIFGTSGGFGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGIPIYEAE 146
EDGIFGTSGG GFTK+NELFVGRVAM+GFAAS+LGE ITGKGILAQLNLETGIPIYEAE
Sbjct: 78 TEDGIFGTSGGIGFTKENELFVGRVAMLGFAASILGEAITGKGILAQLNLETGIPIYEAE 137
Query: 147 PLLLFFILFTLLGAIGALGDRGKFVDEPDEPTGLGGAVIPPGKGLRSALGLKEG------ 200
PLLLFFILFTLLGAIGALGDRG FV DEPTGL A++PPGKGLRSALGL EG
Sbjct: 138 PLLLFFILFTLLGAIGALGDRGSFV---DEPTGLDKAIVPPGKGLRSALGLGEGGPLFGF 194
Query: 201 --------------------------GKGALAQLNIETGIPINEIEPLVLFNVIFFFVAA 234
GKGALAQLNIETG+PI+EIEPLVLFNVIFFFVAA
Sbjct: 195 TKANELFVGRLAQLGIAFSIIGEIITGKGALAQLNIETGVPISEIEPLVLFNVIFFFVAA 254
Query: 235 LNPGTGKFVTDEDEE 249
+NPGTGKFVT +DEE
Sbjct: 255 INPGTGKFVTTDDEE 269
>gi|242055117|ref|XP_002456704.1| hypothetical protein SORBIDRAFT_03g041100 [Sorghum bicolor]
gi|241928679|gb|EES01824.1| hypothetical protein SORBIDRAFT_03g041100 [Sorghum bicolor]
Length = 268
Score = 246 bits (627), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 172/284 (60%), Positives = 189/284 (66%), Gaps = 51/284 (17%)
Query: 1 MAQTMLLMSGVSTSHAGNLKRDSLVTFQTQMLRPKPFSHLMFNPLSNESLTAAAASSSSK 60
MAQ+ML+ STS G SL Q RP P+ L PL + S + S S
Sbjct: 1 MAQSMLM----STSVNGGRALPSL-----QAGRPAPYPRL---PLPSSS--SGYRHSKSV 46
Query: 61 AFSTVALF---KSKTKAPPKTKKVESKPKVEDGIFGTSGGFGFTKQNELFVGRVAMIGFA 117
+ T+ALF K KT K + KPKVEDGIFGTSGG GFTK+NELFVGRVAM+GFA
Sbjct: 47 SVKTLALFGKSKVKTAPSKKAAAPKPKPKVEDGIFGTSGGIGFTKENELFVGRVAMLGFA 106
Query: 118 ASLLGEGITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDEPDEP 177
ASLLGE ITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRG+FVDE E
Sbjct: 107 ASLLGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGRFVDE--EV 164
Query: 178 TGLGGAVIPPGKGLRSALGLKEG--------------------------------GKGAL 205
TGL AVI PGKG R ALGL EG GKGAL
Sbjct: 165 TGLDKAVIQPGKGFRGALGLSEGGPLFGFTKSNELFVGRLAQLGVAFSIIGEIITGKGAL 224
Query: 206 AQLNIETGIPINEIEPLVLFNVIFFFVAALNPGTGKFVTDEDEE 249
AQLNIETG+PINEIEPLV+FNV+FFFVAA+NPG G+F+ EDEE
Sbjct: 225 AQLNIETGVPINEIEPLVIFNVLFFFVAAINPGNGRFIIGEDEE 268
>gi|15294226|gb|AAK95290.1|AF410304_1 unknown protein [Arabidopsis thaliana]
gi|25090250|gb|AAN72262.1| At1g44575/T18F15 [Arabidopsis thaliana]
Length = 265
Score = 244 bits (623), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 173/281 (61%), Positives = 192/281 (68%), Gaps = 49/281 (17%)
Query: 1 MAQTMLLMSGVSTSHAGNLKRDSLVTFQTQMLRPKPFSHLMFNPLSNESLTAAAASSSSK 60
MAQT LL SGV+ H + ++ + +PK H +F LS S A S +
Sbjct: 1 MAQTFLLTSGVTAGH--------FLRNKSPLAQPK--VHHLF--LSGNS--PVALPSRRQ 46
Query: 61 AFSTVALFKSKTKAPPKTKKVESKPKVEDGIFGTSGGFGFTKQNELFVGRVAMIGFAASL 120
+F +ALFK KTKA PK + + K KVEDGIFGTSGG GFTK NELFVGRVAMIGFAASL
Sbjct: 47 SFVPLALFKPKTKAAPKKVE-KPKSKVEDGIFGTSGGIGFTKANELFVGRVAMIGFAASL 105
Query: 121 LGEGITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDEPDEPTGL 180
LGE +TGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVD+P PTGL
Sbjct: 106 LGEALTGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDDP--PTGL 163
Query: 181 GGAVIPPGKGLRSALGLKEG--------------------------------GKGALAQL 208
AVIPPGK +RSALGLKE GKGALAQL
Sbjct: 164 EKAVIPPGKNVRSALGLKEQGPLFGFTKANELFVGRLAQLGIAFSLIGEIITGKGALAQL 223
Query: 209 NIETGIPINEIEPLVLFNVIFFFVAALNPGTGKFVTDEDEE 249
NIETGIPI +IEPLVL NV FFF AA+NPG GKF+TD+ EE
Sbjct: 224 NIETGIPIQDIEPLVLLNVAFFFFAAINPGNGKFITDDGEE 264
>gi|226504130|ref|NP_001150026.1| photosystem II 22 kDa protein [Zea mays]
gi|195636192|gb|ACG37564.1| photosystem II 22 kDa protein [Zea mays]
Length = 271
Score = 244 bits (622), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 169/283 (59%), Positives = 190/283 (67%), Gaps = 49/283 (17%)
Query: 2 AQTMLLMSGVSTSHAGNLKRDSLVTFQTQMLRPKPFSHLMFNPLSNESLTAAAASSSSKA 61
AQ+ML+ STS G SL Q +RP P+ L PL + S ++ S S +
Sbjct: 3 AQSMLM----STSVNGGRALPSL-----QAVRPAPYPRL---PLPSSSSSSGYRHSKSVS 50
Query: 62 FSTVALF---KSKTKAPPKTKKVESKPKVEDGIFGTSGGFGFTKQNELFVGRVAMIGFAA 118
T+ALF K KT K + KPKVEDGIFGTSGG GFTK+NELFVGRVAM+GFAA
Sbjct: 51 VKTLALFGKSKVKTAPAKKAAAPKPKPKVEDGIFGTSGGIGFTKENELFVGRVAMLGFAA 110
Query: 119 SLLGEGITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDEPDEPT 178
SLLGE ITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRG+FVDE E T
Sbjct: 111 SLLGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGRFVDE--EVT 168
Query: 179 GLGGAVIPPGKGLRSALGLKEG--------------------------------GKGALA 206
GL AVI PGKG R ALGL EG GKGALA
Sbjct: 169 GLDKAVIQPGKGFRGALGLSEGGPLFGFTKSNELFVGRMAQLGVAFSIIGEIITGKGALA 228
Query: 207 QLNIETGIPINEIEPLVLFNVIFFFVAALNPGTGKFVTDEDEE 249
QLNIETG+PINEIEPLV+FNV+FFF+AA+NPG G+F+ E+EE
Sbjct: 229 QLNIETGVPINEIEPLVIFNVLFFFIAAINPGNGRFIIGEEEE 271
>gi|414879500|tpg|DAA56631.1| TPA: photosystem II protein [Zea mays]
Length = 272
Score = 241 bits (616), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 171/284 (60%), Positives = 191/284 (67%), Gaps = 50/284 (17%)
Query: 2 AQTMLLMSGVSTSHAGNLKRDSLVTFQTQMLRPKPFSHLMFNPL-SNESLTAAAASSSSK 60
AQ+ML+ STS G SL Q +RP P+ L PL S+ S +A S S
Sbjct: 3 AQSMLM----STSVNGGRALPSL-----QAVRPAPYPRL---PLPSSSSSSAGYRHSKSV 50
Query: 61 AFSTVALF---KSKTKAPPKTKKVESKPKVEDGIFGTSGGFGFTKQNELFVGRVAMIGFA 117
+ T+ALF K KT K + KPKVEDGIFGTSGG GFTK+NELFVGRVAM+GFA
Sbjct: 51 SVKTLALFGKSKVKTAPAKKAAAPKPKPKVEDGIFGTSGGIGFTKENELFVGRVAMLGFA 110
Query: 118 ASLLGEGITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDEPDEP 177
ASLLGE ITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRG+FVDE E
Sbjct: 111 ASLLGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGRFVDE--EV 168
Query: 178 TGLGGAVIPPGKGLRSALGLKEG--------------------------------GKGAL 205
TGL AVI PGKG R ALGL EG GKGAL
Sbjct: 169 TGLDKAVIQPGKGFRGALGLSEGGPLFGFTKSNELFVGRMAQLGVAFSIIGEIITGKGAL 228
Query: 206 AQLNIETGIPINEIEPLVLFNVIFFFVAALNPGTGKFVTDEDEE 249
AQLNIETG+PINEIEPLV+FNV+FFF+AA+NPG G+F+ E+EE
Sbjct: 229 AQLNIETGVPINEIEPLVIFNVLFFFIAAINPGNGRFIIGEEEE 272
>gi|162463509|ref|NP_001105228.1| photosystem II subunit PsbS1 [Zea mays]
gi|33867383|gb|AAQ55066.1| photosystem II subunit PsbS precursor [Zea mays]
Length = 265
Score = 238 bits (607), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 167/275 (60%), Positives = 186/275 (67%), Gaps = 46/275 (16%)
Query: 11 VSTSHAGNLKRDSLVTFQTQMLRPKPFSHLMFNPL-SNESLTAAAASSSSKAFSTVALF- 68
+STS G SL Q +RP P+ L PL S+ S +A S S + T+ALF
Sbjct: 1 MSTSVNGGRALPSL-----QAVRPAPYPRL---PLPSSSSSSAGYRHSKSVSVKTLALFG 52
Query: 69 --KSKTKAPPKTKKVESKPKVEDGIFGTSGGFGFTKQNELFVGRVAMIGFAASLLGEGIT 126
K KT K + KPKVEDGIFGTSGG GFTK+NELFVGRVAM+GFAASLLGE IT
Sbjct: 53 KSKVKTAPAKKAAAPKPKPKVEDGIFGTSGGIGFTKENELFVGRVAMLGFAASLLGEAIT 112
Query: 127 GKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDEPDEPTGLGGAVIP 186
GKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRG+FVDE E TGL AVI
Sbjct: 113 GKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGRFVDE--EVTGLDKAVIQ 170
Query: 187 PGKGLRSALGLKEG--------------------------------GKGALAQLNIETGI 214
PGKG R ALGL EG GKGALAQLNIETG+
Sbjct: 171 PGKGFRGALGLSEGGPLFGFTKSNELFVGRMAQLGVAFSIIGEIITGKGALAQLNIETGV 230
Query: 215 PINEIEPLVLFNVIFFFVAALNPGTGKFVTDEDEE 249
PINEIEPLV+FNV+FFF+AA+NPG G+F+ E+EE
Sbjct: 231 PINEIEPLVIFNVLFFFIAAINPGNGRFIIGEEEE 265
>gi|297846822|ref|XP_002891292.1| hypothetical protein ARALYDRAFT_891398 [Arabidopsis lyrata subsp.
lyrata]
gi|297337134|gb|EFH67551.1| hypothetical protein ARALYDRAFT_891398 [Arabidopsis lyrata subsp.
lyrata]
Length = 265
Score = 235 bits (600), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 175/281 (62%), Positives = 193/281 (68%), Gaps = 49/281 (17%)
Query: 1 MAQTMLLMSGVSTSHAGNLKRDSLVTFQTQMLRPKPFSHLMFNPLSNESLTAAAASSSSK 60
MAQTMLL SGVS AG R+ ++ + +PK H +F LS S S +
Sbjct: 1 MAQTMLLTSGVS---AGQFLRN-----KSPLAQPK--VHHLF--LSGNS--PVVLPSRRQ 46
Query: 61 AFSTVALFKSKTKAPPKTKKVESKPKVEDGIFGTSGGFGFTKQNELFVGRVAMIGFAASL 120
+F +ALFK KTKA PK + K KVEDGIFGTSGG GFTK NELFVGRVAMIGFAASL
Sbjct: 47 SFVPLALFKPKTKAAPKKVEKPKK-KVEDGIFGTSGGIGFTKANELFVGRVAMIGFAASL 105
Query: 121 LGEGITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDEPDEPTGL 180
LGE +TGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRG+FVD+P PTGL
Sbjct: 106 LGEALTGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGQFVDDP--PTGL 163
Query: 181 GGAVIPPGKGLRSALGLKEG--------------------------------GKGALAQL 208
AVIPPGK +RSALGLKE GKGALAQL
Sbjct: 164 EKAVIPPGKNVRSALGLKEQGPLFGFTKANELFVGRLAQLGIAFSLIGEIITGKGALAQL 223
Query: 209 NIETGIPINEIEPLVLFNVIFFFVAALNPGTGKFVTDEDEE 249
NIETGIPI +IEPLVL NV FFF AA+NPG GKF+TD+ EE
Sbjct: 224 NIETGIPIQDIEPLVLLNVAFFFFAAINPGNGKFITDDGEE 264
>gi|1709846|sp|P54773.1|PSBS_SOLLC RecName: Full=Photosystem II 22 kDa protein, chloroplastic;
AltName: Full=CP22; Flags: Precursor
gi|706853|gb|AAA63649.1| 22 kDa component of photosystem II [Solanum lycopersicum]
Length = 276
Score = 233 bits (593), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 178/288 (61%), Positives = 197/288 (68%), Gaps = 51/288 (17%)
Query: 1 MAQTMLLMSGVSTSHAGNLKRDSLVTFQTQMLRPKPFSHLMFNPLSNESLTAAAASSSSK 60
MAQTMLL + ++SLV + L+PKP S L L +++ +SSSK
Sbjct: 1 MAQTMLLTANAKVDLR---SKESLV----ERLKPKPLSSLFLPSLPLRFSSSSTNASSSK 53
Query: 61 AFST-VALFKSKTK------APPKTKKVESKPKVEDGIFGTSGGFGFTKQNELFVGRVAM 113
ST VALFKSK K APPK K+ KVEDGIFGTSGG GFTKQNELFVGRVAM
Sbjct: 54 FTSTTVALFKSKAKAPPKKVAPPKEKQ-----KVEDGIFGTSGGIGFTKQNELFVGRVAM 108
Query: 114 IGFAASLLGEGITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDE 173
IGFAASLLGE ITGKGILAQLNLETGIPIYEAEPLLLFFILF LLGAIGALGDRGKFVD+
Sbjct: 109 IGFAASLLGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFNLLGAIGALGDRGKFVDD 168
Query: 174 PDEPTGLGGAVIPPGKGLRSALGLKEG--------------------------------G 201
P PTGL AVIPPGK +SALGL EG G
Sbjct: 169 PTPPTGLEKAVIPPGKSFKSALGLSEGGPLFGFTKANELFVGRLAQLGIAFSIIGEIITG 228
Query: 202 KGALAQLNIETGIPINEIEPLVLFNVIFFFVAALNPGTGKFVTDEDEE 249
KGALAQLN ETG+PINEIEPL+LFN+ FFF AA+NPGTGKF+TDE+E+
Sbjct: 229 KGALAQLNFETGVPINEIEPLLLFNIAFFFFAAINPGTGKFITDEEED 276
>gi|312281657|dbj|BAJ33694.1| unnamed protein product [Thellungiella halophila]
Length = 267
Score = 232 bits (592), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 168/281 (59%), Positives = 187/281 (66%), Gaps = 47/281 (16%)
Query: 1 MAQTMLLMSGVSTSHAGNLKRDSLVTFQTQMLRPKPFSHLMFNPLSNESLTAAAASSSSK 60
MAQTM+L SGVS + + + + +PK H +F LS S S +
Sbjct: 1 MAQTMMLTSGVSANQ--------FLRNKNPLAQPK--VHHLF--LSGNS--PVVIPSRRQ 46
Query: 61 AFSTVALFKSKTKAPPKTKKVESKPKVEDGIFGTSGGFGFTKQNELFVGRVAMIGFAASL 120
+ +ALFK KTKA PK + KVEDGIFGTSGG GFTK NELFVGRVAMIGFAASL
Sbjct: 47 SLVPLALFKPKTKAAPKKVEKVKP-KVEDGIFGTSGGIGFTKANELFVGRVAMIGFAASL 105
Query: 121 LGEGITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDEPDEPTGL 180
LGE +TGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVD+P PTGL
Sbjct: 106 LGEAVTGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDDPPTPTGL 165
Query: 181 GGAVIPPGKGLRSALGLKEG--------------------------------GKGALAQL 208
AVI PGK +RSALGLKE GKGALAQL
Sbjct: 166 EKAVIAPGKNVRSALGLKEQGPLFGFTKANELFVGRLAQLGIAFSLIGEIITGKGALAQL 225
Query: 209 NIETGIPINEIEPLVLFNVIFFFVAALNPGTGKFVTDEDEE 249
NIETGIPI +IEPLVL NV FFF AA+NPG GKF+TD+ E+
Sbjct: 226 NIETGIPIQDIEPLVLLNVAFFFFAAINPGNGKFITDDGED 266
>gi|295824589|gb|ABF72923.2| chloroplast chlorophyll a/b-binding protein [Solanum nigrum]
gi|295824591|gb|ABF72924.2| chloroplast chlorophyll a/b-binding protein [Solanum nigrum]
Length = 276
Score = 231 bits (589), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 177/288 (61%), Positives = 197/288 (68%), Gaps = 51/288 (17%)
Query: 1 MAQTMLLMSGVSTSHAGNLKRDSLVTFQTQMLRPKPFSHLMFNPLSNESLTAAAASSSSK 60
MAQTMLL + ++SLV + L+PKP S L L +++ +SSSK
Sbjct: 1 MAQTMLLTANAKVDLR---SKESLV----ERLKPKPLSSLFLPSLPLRFSSSSTNASSSK 53
Query: 61 AFST-VALFKSKTK------APPKTKKVESKPKVEDGIFGTSGGFGFTKQNELFVGRVAM 113
ST VALFKSK K APPK K+ KVEDGIFGTSGG GFTKQNELFVGRVAM
Sbjct: 54 FTSTTVALFKSKAKAPPKKVAPPKQKE-----KVEDGIFGTSGGIGFTKQNELFVGRVAM 108
Query: 114 IGFAASLLGEGITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDE 173
IGFAASLLGE ITGKGILAQLNLETGIPIYEAEPLLLFFILF LLGAIGALGDRGKFVD+
Sbjct: 109 IGFAASLLGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFNLLGAIGALGDRGKFVDD 168
Query: 174 PDEPTGLGGAVIPPGKGLRSALGLKEG--------------------------------G 201
P PTGL AVIPPG+ +SALGL EG G
Sbjct: 169 PAPPTGLEKAVIPPGRSFKSALGLSEGGPLFGFTKANELFVGRLAQLGIAFSIIGEIITG 228
Query: 202 KGALAQLNIETGIPINEIEPLVLFNVIFFFVAALNPGTGKFVTDEDEE 249
KGALAQLN ETG+PINEIEPL+LFN+ FFF AA+NPGTGKF+TDE+E+
Sbjct: 229 KGALAQLNFETGVPINEIEPLLLFNIAFFFFAAINPGTGKFITDEEED 276
>gi|302783280|ref|XP_002973413.1| LHC-related protein [Selaginella moellendorffii]
gi|300159166|gb|EFJ25787.1| LHC-related protein [Selaginella moellendorffii]
Length = 266
Score = 230 bits (586), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 143/226 (63%), Positives = 161/226 (71%), Gaps = 43/226 (19%)
Query: 56 SSSSKAFSTVALFKSKTKAPPKTKKVESKPKVEDGIFGTSGGFGFTKQNELFVGRVAMIG 115
SS+S+ T AL K+KAP +KK SK VEDGIFGTSGG GFTKQNELFVGRVAMIG
Sbjct: 52 SSASRIVRTFAL---KSKAPATSKK--SKSTVEDGIFGTSGGIGFTKQNELFVGRVAMIG 106
Query: 116 FAASLLGEGITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDEPD 175
FAASLLGE ITGKG+LAQ +LETGIP+ E EPLLLFFILFTLLGAIGALGDRGKFVDE
Sbjct: 107 FAASLLGEAITGKGVLAQFDLETGIPLNETEPLLLFFILFTLLGAIGALGDRGKFVDETP 166
Query: 176 EPTGLGGAVIPPGKGLRSALGLKEG--------------------------------GKG 203
P +I PGKG +SA+GLKE GKG
Sbjct: 167 GP------IIEPGKGFKSAIGLKEKGPVFGFTKSNELFVGRLAQLGIAFSIIGELITGKG 220
Query: 204 ALAQLNIETGIPINEIEPLVLFNVIFFFVAALNPGTGKFVTDEDEE 249
ALAQLNIETG+PI EIEPL+LFN+IFFF+AA+NPGTG+F+ D +EE
Sbjct: 221 ALAQLNIETGVPITEIEPLLLFNIIFFFIAAINPGTGRFIADNEEE 266
>gi|302789452|ref|XP_002976494.1| LHC-related protein [Selaginella moellendorffii]
gi|300155532|gb|EFJ22163.1| LHC-related protein [Selaginella moellendorffii]
Length = 266
Score = 230 bits (586), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 143/226 (63%), Positives = 161/226 (71%), Gaps = 43/226 (19%)
Query: 56 SSSSKAFSTVALFKSKTKAPPKTKKVESKPKVEDGIFGTSGGFGFTKQNELFVGRVAMIG 115
SS+S+ T AL K+KAP +KK SK VEDGIFGTSGG GFTKQNELFVGRVAMIG
Sbjct: 52 SSASRIVRTFAL---KSKAPATSKK--SKSTVEDGIFGTSGGIGFTKQNELFVGRVAMIG 106
Query: 116 FAASLLGEGITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDEPD 175
FAASLLGE ITGKG+LAQ +LETGIP+ E EPLLLFFILFTLLGAIGALGDRGKFVDE
Sbjct: 107 FAASLLGEAITGKGVLAQFDLETGIPLNETEPLLLFFILFTLLGAIGALGDRGKFVDETP 166
Query: 176 EPTGLGGAVIPPGKGLRSALGLKEG--------------------------------GKG 203
P +I PGKG +SA+GLKE GKG
Sbjct: 167 GP------IIEPGKGFKSAIGLKEKGPVFGFTKSNELFVGRLAQLGIAFSIIGELITGKG 220
Query: 204 ALAQLNIETGIPINEIEPLVLFNVIFFFVAALNPGTGKFVTDEDEE 249
ALAQLNIETG+PI EIEPL+LFN+IFFF+AA+NPGTG+F+ D +EE
Sbjct: 221 ALAQLNIETGVPITEIEPLLLFNIIFFFIAAINPGTGRFIADNEEE 266
>gi|1304215|dbj|BAA12337.1| 22 kDa protein of photosystem II precursor [Oryza sativa Japonica
Group]
Length = 254
Score = 229 bits (585), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 150/223 (67%), Positives = 168/223 (75%), Gaps = 36/223 (16%)
Query: 60 KAFSTVALFKSKTKAPPKTKKV-ESKPKVEDGIFGTSGGFGFTKQNELFVGRVAMIGFAA 118
K VA FKS+TKA PK K ++K VEDGIFGTSGG GFTK+NELFVGRVAM+GFAA
Sbjct: 34 KHLVVVAAFKSRTKASPKVDKSNKNKSIVEDGIFGTSGGIGFTKENELFVGRVAMLGFAA 93
Query: 119 SLLGEGITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDEPDEPT 178
SLLGE +TGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRG+FV D+ T
Sbjct: 94 SLLGEAVTGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGRFV---DDAT 150
Query: 179 GLGGAVIPPGKGLRSALGLKEG--------------------------------GKGALA 206
GL AVIPPGKG R+ALGL EG GKGALA
Sbjct: 151 GLERAVIPPGKGFRAALGLSEGGPLFGFTKANELFVGRLAHVGIAFSLIGEIITGKGALA 210
Query: 207 QLNIETGIPINEIEPLVLFNVIFFFVAALNPGTGKFVTDEDEE 249
QLNIETG+PINEIEPL+LFN++FFF AA+NPGTGKFVTD++++
Sbjct: 211 QLNIETGVPINEIEPLLLFNILFFFFAAINPGTGKFVTDDNDD 253
>gi|115461508|ref|NP_001054354.1| Os04g0690800 [Oryza sativa Japonica Group]
gi|113565925|dbj|BAF16268.1| Os04g0690800 [Oryza sativa Japonica Group]
Length = 254
Score = 229 bits (584), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 150/223 (67%), Positives = 168/223 (75%), Gaps = 36/223 (16%)
Query: 60 KAFSTVALFKSKTKAPPKTKKV-ESKPKVEDGIFGTSGGFGFTKQNELFVGRVAMIGFAA 118
K VA FKS+TKA PK K ++K VEDGIFGTSGG GFTK+NELFVGRVAM+GFAA
Sbjct: 34 KHLVVVAAFKSRTKASPKVDKSNKNKSIVEDGIFGTSGGIGFTKENELFVGRVAMLGFAA 93
Query: 119 SLLGEGITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDEPDEPT 178
SLLGE +TGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRG+FV D+ T
Sbjct: 94 SLLGEAVTGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGRFV---DDAT 150
Query: 179 GLGGAVIPPGKGLRSALGLKEG--------------------------------GKGALA 206
GL AVIPPGKG R+ALGL EG GKGALA
Sbjct: 151 GLERAVIPPGKGFRAALGLSEGGPLFGFTKANELFVGRLAQLGIAFSLIGEIITGKGALA 210
Query: 207 QLNIETGIPINEIEPLVLFNVIFFFVAALNPGTGKFVTDEDEE 249
QLNIETG+PINEIEPL+LFN++FFF AA+NPGTGKFVTD++++
Sbjct: 211 QLNIETGVPINEIEPLLLFNILFFFFAAINPGTGKFVTDDNDD 253
>gi|18202913|sp|Q9FPP4.1|PSBS_SOLSG RecName: Full=Photosystem II 22 kDa protein, chloroplastic;
AltName: Full=CP22; Flags: Precursor
gi|12082782|gb|AAG48610.1|AF311720_1 photosystem II 22 kDa protein precursor [Solanum sogarandinum]
Length = 276
Score = 229 bits (583), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 175/288 (60%), Positives = 194/288 (67%), Gaps = 51/288 (17%)
Query: 1 MAQTMLLMSGVSTSHAGNLKRDSLVTFQTQMLRPKPFSHLMFNPLSNESLTAAAASSSSK 60
MAQTMLL + ++SLV + L+PKP S L L ++ SSSK
Sbjct: 1 MAQTMLLTANAKVDLR---SKESLV----ERLKPKPLSSLFLPSLPLRFSSSTTNFSSSK 53
Query: 61 AFST-VALFKSKTK------APPKTKKVESKPKVEDGIFGTSGGFGFTKQNELFVGRVAM 113
ST VALFKSK K APPK K+ KVEDGIFGTSGG GFTKQNELFVGRVAM
Sbjct: 54 FTSTTVALFKSKAKAPPKKVAPPKEKQ-----KVEDGIFGTSGGIGFTKQNELFVGRVAM 108
Query: 114 IGFAASLLGEGITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDE 173
IGFAASLLGE ITGKGILAQLNLETGIPIYEAEPLLLFFILF LLGAIGALGDRG+F+D+
Sbjct: 109 IGFAASLLGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFNLLGAIGALGDRGRFIDD 168
Query: 174 PDEPTGLGGAVIPPGKGLRSALGLKEG--------------------------------G 201
P TGL AVIPPGK +SALGL EG G
Sbjct: 169 PAPATGLEKAVIPPGKSFKSALGLSEGGPLFGFTKANELFVGRLAQLGIAFSIIGEIITG 228
Query: 202 KGALAQLNIETGIPINEIEPLVLFNVIFFFVAALNPGTGKFVTDEDEE 249
KGALAQLN ETG+PINEIEPL+LFN+ FFF AA+NPGTGKF+TDE+E+
Sbjct: 229 KGALAQLNFETGVPINEIEPLLLFNIAFFFFAAINPGTGKFITDEEED 276
>gi|38345525|emb|CAE01809.2| OSJNBa0039K24.28 [Oryza sativa Japonica Group]
gi|125592162|gb|EAZ32512.1| hypothetical protein OsJ_16732 [Oryza sativa Japonica Group]
Length = 248
Score = 228 bits (582), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 150/223 (67%), Positives = 168/223 (75%), Gaps = 36/223 (16%)
Query: 60 KAFSTVALFKSKTKAPPKTKKV-ESKPKVEDGIFGTSGGFGFTKQNELFVGRVAMIGFAA 118
K VA FKS+TKA PK K ++K VEDGIFGTSGG GFTK+NELFVGRVAM+GFAA
Sbjct: 28 KHLVVVAAFKSRTKASPKVDKSNKNKSIVEDGIFGTSGGIGFTKENELFVGRVAMLGFAA 87
Query: 119 SLLGEGITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDEPDEPT 178
SLLGE +TGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRG+FV D+ T
Sbjct: 88 SLLGEAVTGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGRFV---DDAT 144
Query: 179 GLGGAVIPPGKGLRSALGLKEG--------------------------------GKGALA 206
GL AVIPPGKG R+ALGL EG GKGALA
Sbjct: 145 GLERAVIPPGKGFRAALGLSEGGPLFGFTKANELFVGRLAQLGIAFSLIGEIITGKGALA 204
Query: 207 QLNIETGIPINEIEPLVLFNVIFFFVAALNPGTGKFVTDEDEE 249
QLNIETG+PINEIEPL+LFN++FFF AA+NPGTGKFVTD++++
Sbjct: 205 QLNIETGVPINEIEPLLLFNILFFFFAAINPGTGKFVTDDNDD 247
>gi|90399255|emb|CAH68096.1| B0518A01.1 [Oryza sativa Indica Group]
gi|116311997|emb|CAJ86355.1| H0814G11.22 [Oryza sativa Indica Group]
gi|125550332|gb|EAY96154.1| hypothetical protein OsI_18034 [Oryza sativa Indica Group]
Length = 248
Score = 228 bits (582), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 150/223 (67%), Positives = 168/223 (75%), Gaps = 36/223 (16%)
Query: 60 KAFSTVALFKSKTKAPPKTKKV-ESKPKVEDGIFGTSGGFGFTKQNELFVGRVAMIGFAA 118
K VA FKS+TKA PK K ++K VEDGIFGTSGG GFTK+NELFVGRVAM+GFAA
Sbjct: 28 KHLVVVAAFKSRTKASPKVDKSNKNKSIVEDGIFGTSGGIGFTKENELFVGRVAMLGFAA 87
Query: 119 SLLGEGITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDEPDEPT 178
SLLGE +TGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRG+FV D+ T
Sbjct: 88 SLLGEAVTGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGRFV---DDAT 144
Query: 179 GLGGAVIPPGKGLRSALGLKEG--------------------------------GKGALA 206
GL AVIPPGKG R+ALGL EG GKGALA
Sbjct: 145 GLERAVIPPGKGFRAALGLSEGGPLFGFTKANELFVGRLAQLGIAFSLIGEIITGKGALA 204
Query: 207 QLNIETGIPINEIEPLVLFNVIFFFVAALNPGTGKFVTDEDEE 249
QLNIETG+PINEIEPL+LFN++FFF AA+NPGTGKFVTD++++
Sbjct: 205 QLNIETGVPINEIEPLLLFNILFFFFAAINPGTGKFVTDDNDD 247
>gi|104569511|gb|ABF72925.1| chloroplast chlorophyll a/b-binding protein, partial [Solanum
nigrum]
gi|104569543|gb|ABF72926.1| chloroplast chlorophyll a/b-binding protein [Solanum nigrum]
Length = 268
Score = 218 bits (555), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 172/280 (61%), Positives = 189/280 (67%), Gaps = 51/280 (18%)
Query: 1 MAQTMLLMSGVSTSHAGNLKRDSLVTFQTQMLRPKPFSHLMFNPLSNESLTAAAASSSSK 60
MAQTMLL + ++SLV + L+PKP S L L +++ +SSSK
Sbjct: 1 MAQTMLLTANAKVDLR---SKESLV----ERLKPKPLSSLFLPSLPLRFSSSSTNASSSK 53
Query: 61 AFST-VALFKSKTK------APPKTKKVESKPKVEDGIFGTSGGFGFTKQNELFVGRVAM 113
ST VALFKSK K APPK K+ KVEDGIFGTSGG GFTKQNELFVGRVAM
Sbjct: 54 FTSTTVALFKSKAKAPPKKVAPPKQKE-----KVEDGIFGTSGGIGFTKQNELFVGRVAM 108
Query: 114 IGFAASLLGEGITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDE 173
IGFAASLLGE ITGKGILAQLNLETGIPIYEAEPLLLFFILF LLGAIGALGDRGKFVD+
Sbjct: 109 IGFAASLLGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFNLLGAIGALGDRGKFVDD 168
Query: 174 PDEPTGLGGAVIPPGKGLRSALGLKEG--------------------------------G 201
P PTGL AVIPPG+ +SALGL EG G
Sbjct: 169 PAPPTGLEKAVIPPGRSFKSALGLSEGGPLFGFTKANELFVGRLAQLGIAFSIIGEIITG 228
Query: 202 KGALAQLNIETGIPINEIEPLVLFNVIFFFVAALNPGTGK 241
KGALAQLN ETG+PINEIEPL+LFN+ FFF AA+NPGTGK
Sbjct: 229 KGALAQLNFETGVPINEIEPLLLFNIAFFFFAAINPGTGK 268
>gi|168052249|ref|XP_001778563.1| photosystem II 22kDa chloroplast protein [Physcomitrella patens
subsp. patens]
gi|162670017|gb|EDQ56593.1| photosystem II 22kDa chloroplast protein [Physcomitrella patens
subsp. patens]
Length = 279
Score = 215 bits (548), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 143/236 (60%), Positives = 157/236 (66%), Gaps = 41/236 (17%)
Query: 50 LTAAAASSSSKAFSTVALF---KSKTKAPPKTKKVESKPKVEDGIFGTSGGFGFTKQNEL 106
L A SS A T ALF K KAP TK K KVEDGIFGTSGG GFTK NEL
Sbjct: 48 LNRNAERVSSGAVKTFALFGKTKPAAKAPAPTK---GKAKVEDGIFGTSGGIGFTKANEL 104
Query: 107 FVGRVAMIGFAASLLGEGITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGD 166
FVGRVAM+GFAAS+LGE +TGKG LAQ ++ETGIP+ E EPLLLFFILFTLLGAIGALGD
Sbjct: 105 FVGRVAMLGFAASILGEALTGKGTLAQFDIETGIPLTETEPLLLFFILFTLLGAIGALGD 164
Query: 167 RGKFVDEPDEPT-GLGGAVIPPGKGLRSALGLKEG------------------------- 200
RGKFVD D P GL +I PGKG++ ALGL E
Sbjct: 165 RGKFVD--DAPVAGLDSTIIKPGKGVKGALGLNEKGPVFGFTKSNELFVGRLAQLGIAFA 222
Query: 201 -------GKGALAQLNIETGIPINEIEPLVLFNVIFFFVAALNPGTGKFVTDEDEE 249
GKGALAQLNIETG+PI E+EPL+LFNVIFF AA+NPGTGKFV D+D E
Sbjct: 223 IIGEIITGKGALAQLNIETGVPITELEPLILFNVIFFLFAAVNPGTGKFVNDDDIE 278
>gi|357126063|ref|XP_003564708.1| PREDICTED: photosystem II 22 kDa protein, chloroplastic-like
[Brachypodium distachyon]
Length = 269
Score = 211 bits (538), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 171/284 (60%), Positives = 192/284 (67%), Gaps = 50/284 (17%)
Query: 1 MAQTMLLMSGVSTSHAGNLKRDSLVTFQTQMLRPK--PFSHLMFNPLSNESLTAAAASSS 58
MAQ+ML+ S + +G SL+ Q RP PFS L P S
Sbjct: 1 MAQSMLMSSVNGVASSGR----SLL----QAARPAATPFSRLAL-PASPSYYK----HMP 47
Query: 59 SKAFSTVALF-KSKTKAPPKTKKVESKPKVEDGIFGTSGGFGFTKQNELFVGRVAMIGFA 117
S + T+A+F KSK KA P K KPK EDGIFGTSGG GFTK+NELFVGRVAMIGFA
Sbjct: 48 SLSVRTMAIFGKSKAKAAPAKKVAAPKPKTEDGIFGTSGGIGFTKENELFVGRVAMIGFA 107
Query: 118 ASLLGEGITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDEPDEP 177
AS+LGE ITGKGIL+QLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDE +P
Sbjct: 108 ASILGEAITGKGILSQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDE--QP 165
Query: 178 TGLGGAVIPPGKGLRSALGLKEG--------------------------------GKGAL 205
TGL AVI PGKG RSALGL EG GKGAL
Sbjct: 166 TGLDKAVIAPGKGFRSALGLSEGGPLFGFTKSNELFVGRLAQLGIAFSIIGEIITGKGAL 225
Query: 206 AQLNIETGIPINEIEPLVLFNVIFFFVAALNPGTGKFVTDEDEE 249
AQLNIETG+PI+EIEPLVLFNV+FFFVAA+NPGTGKF++ E+++
Sbjct: 226 AQLNIETGVPISEIEPLVLFNVVFFFVAAINPGTGKFISGEEDD 269
>gi|42571761|ref|NP_973971.1| photosystem II 22 kDa protein [Arabidopsis thaliana]
gi|332193919|gb|AEE32040.1| photosystem II 22 kDa protein [Arabidopsis thaliana]
Length = 205
Score = 189 bits (479), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 138/202 (68%), Positives = 151/202 (74%), Gaps = 19/202 (9%)
Query: 1 MAQTMLLMSGVSTSHAGNLKRDSLVTFQTQMLRPKPFSHLMFNPLSNESLTAAAASSSSK 60
MAQTMLL SGV+ H + ++ + +PK H +F LS S A S +
Sbjct: 1 MAQTMLLTSGVTAGH--------FLRNKSPLAQPK--VHHLF--LSGNS--PVALPSRRQ 46
Query: 61 AFSTVALFKSKTKAPPKTKKVES-KPKVEDGIFGTSGGFGFTKQNELFVGRVAMIGFAAS 119
+F +ALFK KTKA KKVE K KVEDGIFGTSGG GFTK NELFVGRVAMIGFAAS
Sbjct: 47 SFVPLALFKPKTKA--APKKVEKPKSKVEDGIFGTSGGIGFTKANELFVGRVAMIGFAAS 104
Query: 120 LLGEGITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDEPDEPTG 179
LLGE +TGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVD+P PTG
Sbjct: 105 LLGEALTGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDDP--PTG 162
Query: 180 LGGAVIPPGKGLRSALGLKEGG 201
L AVIPPGK +RSALGLKE G
Sbjct: 163 LEKAVIPPGKNVRSALGLKEQG 184
Score = 38.1 bits (87), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 36/55 (65%), Gaps = 2/55 (3%)
Query: 193 SALGLKEGGKGALAQLNIETGIPINEIEPLVLFNVIFFFVAALNP--GTGKFVTD 245
S LG GKG LAQLN+ETGIPI E EPL+LF ++F + A+ GKFV D
Sbjct: 104 SLLGEALTGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDD 158
>gi|71063184|gb|AAZ22183.1| PSII subunit PsbS [Xerophyta humilis]
Length = 159
Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 108/159 (67%), Positives = 117/159 (73%), Gaps = 32/159 (20%)
Query: 108 VGRVAMIGFAASLLGEGITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDR 167
VGRVAMIGFAASLLGE ITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDR
Sbjct: 1 VGRVAMIGFAASLLGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDR 60
Query: 168 GKFVDEPDEPTGLGGAVIPPGKGLRSALGLKEG--------------------------- 200
GKFVD+P PTGL AVIPPGKG+R+ALGL
Sbjct: 61 GKFVDDPPPPTGLERAVIPPGKGIRAALGLNSDGPLFGFTKANELFVGRLAQLGIAFSLI 120
Query: 201 -----GKGALAQLNIETGIPINEIEPLVLFNVIFFFVAA 234
GKGALAQLNIETG+PI++IEPL+L N+ FFF+AA
Sbjct: 121 GEVITGKGALAQLNIETGVPISDIEPLLLLNIAFFFLAA 159
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/63 (68%), Positives = 49/63 (77%)
Query: 98 FGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGIPIYEAEPLLLFFILFTL 157
FGFTK NELFVGR+A +G A SL+GE ITGKG LAQLN+ETG+PI + EPLLL I F
Sbjct: 97 FGFTKANELFVGRLAQLGIAFSLIGEVITGKGALAQLNIETGVPISDIEPLLLLNIAFFF 156
Query: 158 LGA 160
L A
Sbjct: 157 LAA 159
>gi|351720766|ref|NP_001238211.1| uncharacterized protein LOC100305885 [Glycine max]
gi|255626883|gb|ACU13786.1| unknown [Glycine max]
Length = 190
Score = 167 bits (422), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 115/200 (57%), Positives = 141/200 (70%), Gaps = 16/200 (8%)
Query: 1 MAQTMLLMSGV----STSHAGNLKRDSLVTFQTQMLRPKPFSHLMFNPLSNESLTAAAAS 56
MAQT+L +S S +++ +LK+DSL+ Q Q LRPK SHL F PL + S + +++S
Sbjct: 1 MAQTVLFLSSSTVPGSANYSIDLKKDSLIHLQNQGLRPK-ISHLFFVPLPSASYSFSSSS 59
Query: 57 SSSKAFSTVALFKSKTKAPPKTKKVESKPKVEDGIFGTSGGFGFTKQNELFVGRVAMIGF 116
S + + +A FK+KT + K K + KPKVED IFG+SGGFGFTK NELFVGRVAM+GF
Sbjct: 60 SRT-FITALAFFKTKTPS--KVVKSKPKPKVEDAIFGSSGGFGFTKVNELFVGRVAMLGF 116
Query: 117 AASLLGEGITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDEPDE 176
+A LGE ITGKGI+AQLNLETG+PIYEA +LFTLLGAIGAL RGKF+ D
Sbjct: 117 SAPSLGEAITGKGIIAQLNLETGMPIYEA------LLLFTLLGAIGALVYRGKFLY--DL 168
Query: 177 PTGLGGAVIPPGKGLRSALG 196
PT L AVIPPGKGL G
Sbjct: 169 PTELNKAVIPPGKGLSEGQG 188
>gi|6006279|dbj|BAA84769.1| photosystem II 22 kDa protein [Arabidopsis thaliana]
Length = 155
Score = 161 bits (407), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 106/156 (67%), Positives = 112/156 (71%), Gaps = 34/156 (21%)
Query: 126 TGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDEPDEPTGLGGAVI 185
TGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVD+P PTGL AVI
Sbjct: 1 TGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDDP--PTGLEKAVI 58
Query: 186 PPGKGLRSALGLKEG--------------------------------GKGALAQLNIETG 213
PPGK +RSALGLKE GKGALAQLNIETG
Sbjct: 59 PPGKNVRSALGLKEQGPLFGFTKANELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETG 118
Query: 214 IPINEIEPLVLFNVIFFFVAALNPGTGKFVTDEDEE 249
IPI +IEPLVL NV FFF AA+NPG GKF+TD+ EE
Sbjct: 119 IPIQDIEPLVLLNVAFFFFAAINPGNGKFITDDGEE 154
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/79 (58%), Positives = 55/79 (69%), Gaps = 2/79 (2%)
Query: 98 FGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGIPIYEAEPLLLFFILFTL 157
FGFTK NELFVGR+A +G A SL+GE ITGKG LAQLN+ETGIPI + EPL+L + F
Sbjct: 77 FGFTKANELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGIPIQDIEPLVLLNVAFFF 136
Query: 158 LGAIGALGDRGKFVDEPDE 176
AI GKF+ + E
Sbjct: 137 FAAINP--GNGKFITDDGE 153
>gi|306476221|gb|ADM89004.1| chloroplast chlorophyll a/b-binding photosystem II 22kDa subunit S
[Coffea arabica]
Length = 118
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 88/118 (74%), Positives = 94/118 (79%), Gaps = 15/118 (12%)
Query: 105 ELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGAL 164
ELFVGRVAM+GFAAS+LGE ITGKGILAQLNLETGIPIYEAEPLLL FILF LLGAIGAL
Sbjct: 1 ELFVGRVAMLGFAASILGEAITGKGILAQLNLETGIPIYEAEPLLLCFILFNLLGAIGAL 60
Query: 165 GDRGKFVDEPDEPTGLGGAVIPPGKGLRSALGLKEGGK------------GALAQLNI 210
GDRG+FVD D P G+ GAV+PPGKGLR ALGL+EGG G LAQL I
Sbjct: 61 GDRGRFVD--DAP-GIEGAVVPPGKGLRGALGLREGGPLFGFTKANELFVGRLAQLGI 115
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 35/55 (63%), Gaps = 2/55 (3%)
Query: 193 SALGLKEGGKGALAQLNIETGIPINEIEPLVLFNVIFFFVAALNP--GTGKFVTD 245
S LG GKG LAQLN+ETGIPI E EPL+L ++F + A+ G+FV D
Sbjct: 15 SILGEAITGKGILAQLNLETGIPIYEAEPLLLCFILFNLLGAIGALGDRGRFVDD 69
>gi|145079474|tpg|DAA05916.1| TPA_inf: chloroplast photosystem II 22 kDa PsbS protein precursor
psbS [Acetabularia acetabulum]
Length = 242
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/180 (42%), Positives = 104/180 (57%), Gaps = 35/180 (19%)
Query: 99 GFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGIPIYEAEPLLLFFILFTLL 158
GFTK NELFVGR+AMIGFA++++GE +TGKG LAQ LETGIPI + EPL++ ++F L+
Sbjct: 66 GFTKSNELFVGRLAMIGFASAIIGELLTGKGALAQFGLETGIPITDTEPLVIGLVIFNLV 125
Query: 159 GAIGALGDRGKFV-DEPDEPTGLGGAVIPP--------------GKGLRSA--------- 194
A+ L +G FV + +E G G++ P G G A
Sbjct: 126 AAL--LPAKGVFVPSDEEEEEGPKGSLQDPSISILQPQKFFGISGFGFTKANELFVGRVA 183
Query: 195 --------LGLKEGGKGALAQLNIETGIPINEIEPLVLFNVIFFFVAALNPGTGKFVTDE 246
+G GKG LAQ +IETG+P+ + EPL+L + F AA+N G+G+F TDE
Sbjct: 184 QLGFAFALIGEAITGKGPLAQFDIETGLPLADTEPLLLVFIAFTLFAAINEGSGRF-TDE 242
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/82 (63%), Positives = 61/82 (74%), Gaps = 3/82 (3%)
Query: 92 FGTSGGFGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGIPIYEAEPLLLF 151
FG SG FGFTK NELFVGRVA +GFA +L+GE ITGKG LAQ ++ETG+P+ + EPLLL
Sbjct: 164 FGISG-FGFTKANELFVGRVAQLGFAFALIGEAITGKGPLAQFDIETGLPLADTEPLLLV 222
Query: 152 FILFTLLGAIGALGDRGKFVDE 173
FI FTL AI G+F DE
Sbjct: 223 FIAFTLFAAINE--GSGRFTDE 242
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/50 (64%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 201 GKGALAQLNIETGIPINEIEPLVLFNVIFFFVAALNPGTGKFV-TDEDEE 249
GKGALAQ +ETGIPI + EPLV+ VIF VAAL P G FV +DE+EE
Sbjct: 94 GKGALAQFGLETGIPITDTEPLVIGLVIFNLVAALLPAKGVFVPSDEEEE 143
>gi|145079494|tpg|DAA05917.1| TPA_inf: chloroplast photosystem II 22 kDa PsbS protein precursor
psbS [Acetabularia acetabulum]
Length = 243
Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 76/176 (43%), Positives = 103/176 (58%), Gaps = 34/176 (19%)
Query: 99 GFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGIPIYEAEPLLLFFILFTLL 158
GFTK NELFVGR+AMIGFA++++GE +TGKG LAQ LETGIPI + EPL++ ++F L+
Sbjct: 66 GFTKSNELFVGRLAMIGFASAIIGELLTGKGALAQFGLETGIPITDTEPLVIGLVIFNLV 125
Query: 159 GAIGALGDRGKFV--DEPDEPTGLGG------AVIPPGKGL----------------RSA 194
A+ L +G FV DE +E G +++ P K L R A
Sbjct: 126 AAL--LPAKGVFVPSDEEEEERPKGSLQDPSISILQPLKFLGISGFGFTKANELFVGRVA 183
Query: 195 --------LGLKEGGKGALAQLNIETGIPINEIEPLVLFNVIFFFVAALNPGTGKF 242
+G GKG LAQ +IETG+P+++ EPL+L + F AA+N GTG F
Sbjct: 184 QLGFAFALIGEAVTGKGPLAQFDIETGLPLSDTEPLLLAFIAFTLFAAINEGTGTF 239
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/65 (67%), Positives = 53/65 (81%)
Query: 97 GFGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGIPIYEAEPLLLFFILFT 156
GFGFTK NELFVGRVA +GFA +L+GE +TGKG LAQ ++ETG+P+ + EPLLL FI FT
Sbjct: 168 GFGFTKANELFVGRVAQLGFAFALIGEAVTGKGPLAQFDIETGLPLSDTEPLLLAFIAFT 227
Query: 157 LLGAI 161
L AI
Sbjct: 228 LFAAI 232
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/50 (64%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 201 GKGALAQLNIETGIPINEIEPLVLFNVIFFFVAALNPGTGKFV-TDEDEE 249
GKGALAQ +ETGIPI + EPLV+ VIF VAAL P G FV +DE+EE
Sbjct: 94 GKGALAQFGLETGIPITDTEPLVIGLVIFNLVAALLPAKGVFVPSDEEEE 143
>gi|384246138|gb|EIE19629.1| hypothetical protein COCSUDRAFT_19247, partial [Coccomyxa
subellipsoidea C-169]
Length = 182
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/183 (43%), Positives = 107/183 (58%), Gaps = 36/183 (19%)
Query: 98 FGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGIPIYEAEPLLLFFILFTL 157
GFTK NELFV R AMIG A S++GE +TGKG L QL ETG+PI E + ++LF I F L
Sbjct: 3 LGFTKSNELFVSRAAMIGVATSIIGELLTGKGALQQLGFETGLPIQELDGIVLFIIAFNL 62
Query: 158 LGAIGALGDRGKFVDEPDE--PTGLGG------AVIPPGK-----------------GLR 192
+ A+ L +G FV + +E P G +++ PGK G
Sbjct: 63 IAAL--LPAKGTFVPDEEELTPRPKGALQDSKVSLVTPGKFFGIKGLGFTKANELFAGRL 120
Query: 193 SALG-----LKEG--GKGALAQLNIETGIPINEIEP-LVLFNVIFFFVAALNPGTGKFVT 244
+ LG + EG GKG L QLN+ETGIP+ +++ L++F VI F+AA+N G+GKFV
Sbjct: 121 AQLGFAASLIGEGLTGKGILGQLNVETGIPLKDVDAVLLVFGVILPFLAAINEGSGKFV- 179
Query: 245 DED 247
DED
Sbjct: 180 DED 182
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/125 (46%), Positives = 76/125 (60%), Gaps = 14/125 (11%)
Query: 61 AFSTVA-LFKSKTKAPPKTKKVESKPK----------VEDGIFGTSGGFGFTKQNELFVG 109
AF+ +A L +K P +++ +PK V G F G GFTK NELF G
Sbjct: 59 AFNLIAALLPAKGTFVPDEEELTPRPKGALQDSKVSLVTPGKFFGIKGLGFTKANELFAG 118
Query: 110 RVAMIGFAASLLGEGITGKGILAQLNLETGIPIYEAEPLLLFF-ILFTLLGAIGALGDRG 168
R+A +GFAASL+GEG+TGKGIL QLN+ETGIP+ + + +LL F ++ L AI G
Sbjct: 119 RLAQLGFAASLIGEGLTGKGILGQLNVETGIPLKDVDAVLLVFGVILPFLAAINE--GSG 176
Query: 169 KFVDE 173
KFVDE
Sbjct: 177 KFVDE 181
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 34/48 (70%)
Query: 201 GKGALAQLNIETGIPINEIEPLVLFNVIFFFVAALNPGTGKFVTDEDE 248
GKGAL QL ETG+PI E++ +VLF + F +AAL P G FV DE+E
Sbjct: 32 GKGALQQLGFETGLPIQELDGIVLFIIAFNLIAALLPAKGTFVPDEEE 79
>gi|380293423|gb|AFD50359.1| photosystem II 22 KDa protein, partial [Mentha spicata]
gi|380293425|gb|AFD50360.1| photosystem II 22 KDa protein, partial [Mentha spicata]
Length = 85
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/84 (82%), Positives = 73/84 (86%), Gaps = 3/84 (3%)
Query: 118 ASLLGEGITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDEPDEP 177
ASLLGE +TGKGIL+QLNLETGIPIYEAEPLLLFFILF LLGAIGALGDRG+FVD D P
Sbjct: 1 ASLLGEAVTGKGILSQLNLETGIPIYEAEPLLLFFILFNLLGAIGALGDRGRFVD--DAP 58
Query: 178 -TGLGGAVIPPGKGLRSALGLKEG 200
TGL AVI PGKG RSALGL +G
Sbjct: 59 ATGLDKAVIAPGKGFRSALGLGDG 82
>gi|307110251|gb|EFN58487.1| hypothetical protein CHLNCDRAFT_140514 [Chlorella variabilis]
Length = 248
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/124 (48%), Positives = 79/124 (63%), Gaps = 13/124 (10%)
Query: 61 AFSTVALF-KSKTKAPPKTKKVESKPK----------VEDGIFGTSGGFGFTKQNELFVG 109
AF+ +A F +K K P ++E +PK +E F FGF+K+NELFVG
Sbjct: 126 AFNLLAAFLPAKGKFVPDEAELEERPKGPLQDPRISLLEPKRFLGVSSFGFSKENELFVG 185
Query: 110 RVAMIGFAASLLGEGITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGK 169
RVA +GFAA+L+GE ITG+GIL Q+ +ETG+P+ + EPLLL FI FTL A+ GK
Sbjct: 186 RVAQLGFAAALIGEAITGQGILGQIGIETGLPLSQTEPLLLGFIAFTLFAAVNE--GSGK 243
Query: 170 FVDE 173
FVDE
Sbjct: 244 FVDE 247
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/182 (36%), Positives = 90/182 (49%), Gaps = 45/182 (24%)
Query: 99 GFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGIPIYEAEPLLLFFILFTLL 158
GFTK N AM+G A++L+GE +TG G LAQL E I++ E +L I F LL
Sbjct: 78 GFTKSN-------AMLGVASALIGEVLTGSGPLAQLGYEFKESIFDVEFEILAVIAFNLL 130
Query: 159 GAIGALGDRGKFVDEPDE------PTG---------------LGGAVIPPGK-------- 189
A L +GKFV PDE P G LG + K
Sbjct: 131 AAF--LPAKGKFV--PDEAELEERPKGPLQDPRISLLEPKRFLGVSSFGFSKENELFVGR 186
Query: 190 ----GLRSAL-GLKEGGKGALAQLNIETGIPINEIEPLVLFNVIFFFVAALNPGTGKFVT 244
G +AL G G+G L Q+ IETG+P+++ EPL+L + F AA+N G+GKFV
Sbjct: 187 VAQLGFAAALIGEAITGQGILGQIGIETGLPLSQTEPLLLGFIAFTLFAAVNEGSGKFVD 246
Query: 245 DE 246
++
Sbjct: 247 EK 248
>gi|159462492|ref|XP_001689476.1| chloroplast photosystem II-associated 22 kDa protein [Chlamydomonas
reinhardtii]
gi|158283464|gb|EDP09214.1| chloroplast photosystem II-associated 22 kDa protein [Chlamydomonas
reinhardtii]
Length = 245
Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 86/248 (34%), Positives = 122/248 (49%), Gaps = 59/248 (23%)
Query: 54 AASSSSKAFS---------TVALFKSKTKAPPKTKKVESKPKVEDGIFGTSGGF------ 98
A + S+KAF+ TV ++ + TK PK + SK +VE F + G
Sbjct: 2 AMTLSTKAFAQRGVSARKNTVRVYAASTKVNPK---LASKTEVER--FKQATGLPAPAIN 56
Query: 99 --------GFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGIPIYEAEPLLL 150
GFTK NELFVGR+AM+GF+ASL+GE +TGKG LAQ ETG+ E + L++
Sbjct: 57 GKQFPLKLGFTKTNELFVGRLAMVGFSASLIGEILTGKGALAQFGYETGLNGIEVDGLVI 116
Query: 151 FFILFTLLGAI--------------------GALGDRGKFVDEPDEPTGLGGAVIPPGKG 190
I F L+ A+ G L D + EP + G+ G
Sbjct: 117 GLIAFNLIAAVLPTSQTFVPEEQDTISERPAGPLQDPRITLLEPKKFFGVQGFGFTKENE 176
Query: 191 L---RSA--------LGLKEGGKGALAQLNIETGIPINEIEPLVLFNVIFFFVAALNPGT 239
L R+A +G GKGALAQ +IETG+ + + E ++ ++F AA+N G+
Sbjct: 177 LFVGRAAQLGFAFSLIGEAVTGKGALAQFDIETGLSLRDTEFGLVVFILFLLFAAINEGS 236
Query: 240 GKFVTDED 247
GKFV +E
Sbjct: 237 GKFVDEES 244
>gi|159463386|ref|XP_001689923.1| chloroplast photosystem II-associated 22 kDa protein [Chlamydomonas
reinhardtii]
gi|158283911|gb|EDP09661.1| chloroplast photosystem II-associated 22 kDa protein [Chlamydomonas
reinhardtii]
Length = 245
Score = 96.7 bits (239), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 86/248 (34%), Positives = 122/248 (49%), Gaps = 59/248 (23%)
Query: 54 AASSSSKAFS---------TVALFKSKTKAPPKTKKVESKPKVEDGIFGTSGGF------ 98
A + S+KAF+ TV ++ + TK PK + SK +VE F + G
Sbjct: 2 AMTLSTKAFAQRGVSARKNTVRVYAATTKVNPK---LASKTEVER--FKQATGLPAPAIN 56
Query: 99 --------GFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGIPIYEAEPLLL 150
GFTK NELFVGR+AM+GF+ASL+GE +TGKG LAQ ETG+ E + L++
Sbjct: 57 GKQFPLKLGFTKTNELFVGRLAMVGFSASLIGEILTGKGALAQFGYETGLNGIEVDGLVI 116
Query: 151 FFILFTLLGAI--------------------GALGDRGKFVDEPDEPTGLGGAVIPPGKG 190
I F L+ A+ G L D + EP + G+ G
Sbjct: 117 GLIAFNLIAAVLPTSQTFVPEEQDTISERPAGPLQDPRITLLEPKKFFGVQGFGFTKENE 176
Query: 191 L---RSA--------LGLKEGGKGALAQLNIETGIPINEIEPLVLFNVIFFFVAALNPGT 239
L R+A +G GKGALAQ +IETG+ + + E ++ ++F AA+N G+
Sbjct: 177 LFVGRAAQLGFAFSLIGEAVTGKGALAQFDIETGLSLRDTEFGLVVFILFLLFAAINEGS 236
Query: 240 GKFVTDED 247
GKFV +E
Sbjct: 237 GKFVDEES 244
>gi|355340447|gb|AER58182.1| chloroplast photosystem II subunit S [Ulva linza]
Length = 243
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/182 (38%), Positives = 98/182 (53%), Gaps = 36/182 (19%)
Query: 98 FGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGIPIYEAEPLLLFFILFTL 157
GFTK NELFVGR+AM+G A + +GE ITGKG L QL++ETG I + + +LF I+F L
Sbjct: 64 LGFTKNNELFVGRMAMLGVAFAAIGEVITGKGPLGQLSIETGSSITDIDGAVLFLIVFNL 123
Query: 158 LGAIGALGDRGKFVDEPDE----PTGL----GGAVIPPGK-----------------GLR 192
+ A+ L +GK V DE P G +V+ P K G
Sbjct: 124 IAAL--LPAKGKLVLPEDEFEARPKGSLQDPSVSVLQPKKFFGISGFGFTKENELFVGRM 181
Query: 193 SALG---------LKEGGKGALAQLNIETGIPINEIEPLVLFNVIFFFVAALNPGTGKFV 243
+ LG L G G L Q+ TG+P++E EPL++F+++F AA+N G+G FV
Sbjct: 182 AQLGFAAMLLGETLLPGDLGPLGQIGFTTGVPLSETEPLLIFSILFTLFAAINEGSGDFV 241
Query: 244 TD 245
+
Sbjct: 242 DE 243
Score = 50.1 bits (118), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 36/56 (64%)
Query: 193 SALGLKEGGKGALAQLNIETGIPINEIEPLVLFNVIFFFVAALNPGTGKFVTDEDE 248
+A+G GKG L QL+IETG I +I+ VLF ++F +AAL P GK V EDE
Sbjct: 85 AAIGEVITGKGPLGQLSIETGSSITDIDGAVLFLIVFNLIAALLPAKGKLVLPEDE 140
>gi|411342231|gb|AFW18037.1| chloroplast photosystem II subunit S [Ulva prolifera]
Length = 244
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/182 (38%), Positives = 97/182 (53%), Gaps = 36/182 (19%)
Query: 98 FGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGIPIYEAEPLLLFFILFTL 157
GFTK NELFVGR+AM+G A + +GE ITGKG L QL++ETG I + + +LF I F L
Sbjct: 65 LGFTKNNELFVGRMAMLGVAFAAIGEVITGKGPLGQLSIETGSSITDIDGAVLFLIAFNL 124
Query: 158 LGAIGALGDRGKFVDEPDE----PTGL----GGAVIPPGK-----------------GLR 192
+ A+ L +GK V DE P G +V+ P K G
Sbjct: 125 IAAL--LPAKGKLVLPEDEFEARPKGSLQDPSVSVLQPKKFFGISGFGFTKENELFVGRM 182
Query: 193 SALG---------LKEGGKGALAQLNIETGIPINEIEPLVLFNVIFFFVAALNPGTGKFV 243
+ LG L G G L Q+ TG+P++E EPL++F+++F AA+N G+G FV
Sbjct: 183 AQLGFAAMLLGETLLPGDLGPLGQIGFTTGVPLSETEPLLIFSILFTLFAAINEGSGDFV 242
Query: 244 TD 245
+
Sbjct: 243 DE 244
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/121 (47%), Positives = 71/121 (58%), Gaps = 16/121 (13%)
Query: 66 ALFKSKTKAPPKTKKVESKPK--VED---------GIFGTSGGFGFTKQNELFVGRVAMI 114
AL +K K + E++PK ++D FG SG FGFTK+NELFVGR+A +
Sbjct: 127 ALLPAKGKLVLPEDEFEARPKGSLQDPSVSVLQPKKFFGISG-FGFTKENELFVGRMAQL 185
Query: 115 GFAASLLGEGIT--GKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVD 172
GFAA LLGE + G L Q+ TG+P+ E EPLL+F ILFTL AI G FVD
Sbjct: 186 GFAAMLLGETLLPGDLGPLGQIGFTTGVPLSETEPLLIFSILFTLFAAINE--GSGDFVD 243
Query: 173 E 173
E
Sbjct: 244 E 244
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 35/56 (62%)
Query: 193 SALGLKEGGKGALAQLNIETGIPINEIEPLVLFNVIFFFVAALNPGTGKFVTDEDE 248
+A+G GKG L QL+IETG I +I+ VLF + F +AAL P GK V EDE
Sbjct: 86 AAIGEVITGKGPLGQLSIETGSSITDIDGAVLFLIAFNLIAALLPAKGKLVLPEDE 141
>gi|302848396|ref|XP_002955730.1| hypothetical protein VOLCADRAFT_83375 [Volvox carteri f.
nagariensis]
gi|300258923|gb|EFJ43155.1| hypothetical protein VOLCADRAFT_83375 [Volvox carteri f.
nagariensis]
Length = 241
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/181 (38%), Positives = 98/181 (54%), Gaps = 35/181 (19%)
Query: 99 GFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGIPIYEAEPLLLFFILFTLL 158
GFTK NELFVGR+AM+GFA+SL+GE +TGKG LAQ ETG+ E + L++ + F L+
Sbjct: 63 GFTKTNELFVGRLAMLGFASSLIGEILTGKGPLAQFGYETGLNGIEVDGLIIGLVAFNLI 122
Query: 159 GAIGALGDRGKFVDE-----PDEPTGLGG----AVIPPGK--GLR--------------- 192
A+ L FV E D P G +++ P + G++
Sbjct: 123 AAV--LPTSQTFVPEEQQSIQDRPAGPLQDPRISLLDPKRFFGVKGFGFTKENELFVGRM 180
Query: 193 -------SALGLKEGGKGALAQLNIETGIPINEIEPLVLFNVIFFFVAALNPGTGKFVTD 245
S +G GKGALAQ +IETG+ + + E ++ ++F AA+N GTGKFV +
Sbjct: 181 AQLGFAFSIIGEVTTGKGALAQFDIETGLSLRDTEFGLVVFILFLLFAAVNEGTGKFVDE 240
Query: 246 E 246
E
Sbjct: 241 E 241
Score = 83.2 bits (204), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 55/126 (43%), Positives = 77/126 (61%), Gaps = 16/126 (12%)
Query: 61 AFSTVA--LFKSKTKAPPKTKKVESKPK--VED---------GIFGTSGGFGFTKQNELF 107
AF+ +A L S+T P + + ++ +P ++D FG G FGFTK+NELF
Sbjct: 118 AFNLIAAVLPTSQTFVPEEQQSIQDRPAGPLQDPRISLLDPKRFFGVKG-FGFTKENELF 176
Query: 108 VGRVAMIGFAASLLGEGITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDR 167
VGR+A +GFA S++GE TGKG LAQ ++ETG+ + + E L+ FILF L A+
Sbjct: 177 VGRMAQLGFAFSIIGEVTTGKGALAQFDIETGLSLRDTEFGLVVFILFLLFAAVNE--GT 234
Query: 168 GKFVDE 173
GKFVDE
Sbjct: 235 GKFVDE 240
>gi|361068553|gb|AEW08588.1| Pinus taeda anonymous locus CL634Contig1_03 genomic sequence
gi|383134979|gb|AFG48478.1| Pinus taeda anonymous locus CL634Contig1_03 genomic sequence
gi|383134980|gb|AFG48479.1| Pinus taeda anonymous locus CL634Contig1_03 genomic sequence
gi|383134981|gb|AFG48480.1| Pinus taeda anonymous locus CL634Contig1_03 genomic sequence
gi|383134982|gb|AFG48481.1| Pinus taeda anonymous locus CL634Contig1_03 genomic sequence
gi|383134983|gb|AFG48482.1| Pinus taeda anonymous locus CL634Contig1_03 genomic sequence
gi|383134984|gb|AFG48483.1| Pinus taeda anonymous locus CL634Contig1_03 genomic sequence
gi|383134985|gb|AFG48484.1| Pinus taeda anonymous locus CL634Contig1_03 genomic sequence
gi|383134986|gb|AFG48485.1| Pinus taeda anonymous locus CL634Contig1_03 genomic sequence
gi|383134987|gb|AFG48486.1| Pinus taeda anonymous locus CL634Contig1_03 genomic sequence
gi|383134988|gb|AFG48487.1| Pinus taeda anonymous locus CL634Contig1_03 genomic sequence
gi|383134989|gb|AFG48488.1| Pinus taeda anonymous locus CL634Contig1_03 genomic sequence
gi|383134990|gb|AFG48489.1| Pinus taeda anonymous locus CL634Contig1_03 genomic sequence
gi|383134991|gb|AFG48490.1| Pinus taeda anonymous locus CL634Contig1_03 genomic sequence
gi|383134992|gb|AFG48491.1| Pinus taeda anonymous locus CL634Contig1_03 genomic sequence
gi|383134993|gb|AFG48492.1| Pinus taeda anonymous locus CL634Contig1_03 genomic sequence
gi|383134994|gb|AFG48493.1| Pinus taeda anonymous locus CL634Contig1_03 genomic sequence
Length = 53
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/49 (81%), Positives = 45/49 (91%)
Query: 201 GKGALAQLNIETGIPINEIEPLVLFNVIFFFVAALNPGTGKFVTDEDEE 249
GKGALAQLNIETG+PI +IEPLVLFNV+FF +AA+NPG GKFVTD DEE
Sbjct: 4 GKGALAQLNIETGVPITDIEPLVLFNVLFFLIAAVNPGNGKFVTDVDEE 52
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 38/52 (73%), Gaps = 2/52 (3%)
Query: 125 ITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDEPDE 176
ITGKG LAQLN+ETG+PI + EPL+LF +LF L+ A+ GKFV + DE
Sbjct: 2 ITGKGALAQLNIETGVPITDIEPLVLFNVLFFLIAAVNP--GNGKFVTDVDE 51
>gi|414879499|tpg|DAA56630.1| TPA: hypothetical protein ZEAMMB73_446691 [Zea mays]
Length = 65
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/49 (77%), Positives = 46/49 (93%)
Query: 201 GKGALAQLNIETGIPINEIEPLVLFNVIFFFVAALNPGTGKFVTDEDEE 249
GKGALAQLNIETG+PINEIEPLV+FNV+FFF+AA+NPG G+F+ E+EE
Sbjct: 17 GKGALAQLNIETGVPINEIEPLVIFNVLFFFIAAINPGNGRFIIGEEEE 65
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 46/66 (69%), Gaps = 2/66 (3%)
Query: 111 VAMIGFAASLLGEGITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKF 170
+A +G A S++GE ITGKG LAQLN+ETG+PI E EPL++F +LF + AI G+F
Sbjct: 1 MAQLGVAFSIIGEIITGKGALAQLNIETGVPINEIEPLVIFNVLFFFIAAINP--GNGRF 58
Query: 171 VDEPDE 176
+ +E
Sbjct: 59 IIGEEE 64
>gi|62319374|dbj|BAD94678.1| Photosystem II chlorophyll-binding protein PsbS [Arabidopsis
thaliana]
Length = 66
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/49 (79%), Positives = 43/49 (87%)
Query: 201 GKGALAQLNIETGIPINEIEPLVLFNVIFFFVAALNPGTGKFVTDEDEE 249
GKGALAQLNIETGIPI +IEPLVL NV FFF AA+NPG GKF+TD+ EE
Sbjct: 17 GKGALAQLNIETGIPIQDIEPLVLLNVAFFFFAAINPGNGKFITDDGEE 65
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 44/68 (64%), Gaps = 2/68 (2%)
Query: 111 VAMIGFAASLLGEGITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKF 170
+A +G A SL+GE ITGKG LAQLN+ETGIPI + EPL+L + F AI GKF
Sbjct: 1 LAQLGIAFSLIGEIITGKGALAQLNIETGIPIQDIEPLVLLNVAFFFFAAINP--GNGKF 58
Query: 171 VDEPDEPT 178
+ + E +
Sbjct: 59 ITDDGEES 66
>gi|384245655|gb|EIE19148.1| hypothetical protein COCSUDRAFT_59631 [Coccomyxa subellipsoidea
C-169]
Length = 248
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 54/78 (69%), Gaps = 4/78 (5%)
Query: 98 FGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGIPIYEAEPLLLFFILFTL 157
FGF+K+NEL VGR A +GF A+++GE +TG G L Q LETGIP+ +A LL+ FI F L
Sbjct: 169 FGFSKKNELLVGRTAQLGFLAAVIGEKVTGFGPLKQFGLETGIPLGQASVLLVAFISFFL 228
Query: 158 LGAI--GALGDRGKFVDE 173
+ AI G GD K +DE
Sbjct: 229 VAAIFNGEYGD--KAIDE 244
>gi|93004419|gb|ABE97124.1| chloroplast PSII associated light-harvesting complex II protein
[Solanum lycopersicum]
Length = 52
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/52 (94%), Positives = 49/52 (94%)
Query: 118 ASLLGEGITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGK 169
ASLLGE ITGKGILAQLNLETGIPIYEAEPLLLFFILF LLGAIGALGDRG
Sbjct: 1 ASLLGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFNLLGAIGALGDRGN 52
Score = 36.6 bits (83), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 17/21 (80%), Positives = 18/21 (85%)
Query: 201 GKGALAQLNIETGIPINEIEP 221
GKG LAQLN+ETGIPI E EP
Sbjct: 10 GKGILAQLNLETGIPIYEAEP 30
>gi|93004421|gb|ABE97126.1| chloroplast PSII associated light-harvesting complex II protein
[Solanum cheesmaniae]
Length = 51
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/51 (96%), Positives = 49/51 (96%)
Query: 118 ASLLGEGITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRG 168
ASLLGE ITGKGILAQLNLETGIPIYEAEPLLLFFILF LLGAIGALGDRG
Sbjct: 1 ASLLGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFNLLGAIGALGDRG 51
Score = 36.6 bits (83), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 17/21 (80%), Positives = 18/21 (85%)
Query: 201 GKGALAQLNIETGIPINEIEP 221
GKG LAQLN+ETGIPI E EP
Sbjct: 10 GKGILAQLNLETGIPIYEAEP 30
>gi|116783220|gb|ABK22842.1| unknown [Picea sitchensis]
gi|116790672|gb|ABK25698.1| unknown [Picea sitchensis]
Length = 153
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/86 (51%), Positives = 55/86 (63%), Gaps = 9/86 (10%)
Query: 32 LRPKPFSHLMFNPLSNESLTAAAASSSSKAFSTVALFKSKTKA--PPKTKKV------ES 83
+RP + ++PL E +A AA +++ +TVALF+ K KA PPK + E
Sbjct: 40 IRPPNAAETSWSPL-RELPSANAAGLNARTANTVALFRPKEKAAAPPKKGRTGRVSVPEE 98
Query: 84 KPKVEDGIFGTSGGFGFTKQNELFVG 109
KPKVEDGIFGTSGG GFTK NELFVG
Sbjct: 99 KPKVEDGIFGTSGGIGFTKANELFVG 124
>gi|93004420|gb|ABE97125.1| chloroplast PSII associated light-harvesting complex II protein
[Solanum chilense]
Length = 49
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/49 (95%), Positives = 47/49 (95%)
Query: 118 ASLLGEGITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGD 166
ASLLGE ITGKGILAQLNLETGIPIYEAEPLLLFFILF LLGAIGALGD
Sbjct: 1 ASLLGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFNLLGAIGALGD 49
Score = 36.6 bits (83), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 20/29 (68%), Positives = 21/29 (72%)
Query: 193 SALGLKEGGKGALAQLNIETGIPINEIEP 221
S LG GKG LAQLN+ETGIPI E EP
Sbjct: 2 SLLGEAITGKGILAQLNLETGIPIYEAEP 30
>gi|384247000|gb|EIE20488.1| hypothetical protein COCSUDRAFT_43923 [Coccomyxa subellipsoidea
C-169]
Length = 221
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/106 (48%), Positives = 62/106 (58%), Gaps = 14/106 (13%)
Query: 71 KTKAPPKTKKVESKPKVEDGIFGTSGGFGFTKQNELFVGRVAMIGFAASLLGEGIT-GKG 129
K A P K ++ E FGTS GFGFTK+NELFVGRVAM+GFA+ L+GE +T GKG
Sbjct: 115 KRPAGPTQKAMDPSKPAE--YFGTSKGFGFTKKNELFVGRVAMLGFASELIGEVLTKGKG 172
Query: 130 ILAQLNLETGIPI-YEAEPLLLFFIL-----FTLLGAIGALGDRGK 169
L Q+ GIP+ E P F L F L AIG G+ G+
Sbjct: 173 PLGQI----GIPLNTEVNPQYATFALAVWVGFFLFAAIG-FGNWGQ 213
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 47/93 (50%), Gaps = 3/93 (3%)
Query: 100 FTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLG 159
FT++ E++VGR AM GF ++++GE +TG+G L QL LET +P + + F +
Sbjct: 37 FTRRREIWVGRTAMTGFLSAVIGELLTGRGALGQLQLETRLPQNVINWAVFGIVAFNFVT 96
Query: 160 AIGALG---DRGKFVDEPDEPTGLGGAVIPPGK 189
A+ G D D P G + P K
Sbjct: 97 ALNPFGPTFDEDNQADVRKRPAGPTQKAMDPSK 129
Score = 38.5 bits (88), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Query: 201 GKGALAQLNIETGIPINEIEPLVLFNVIFFFVAALNPGTGKFVTDEDEE 249
G+GAL QL +ET +P N I V V F FV ALNP F DED +
Sbjct: 64 GRGALGQLQLETRLPQNVINWAVFGIVAFNFVTALNPFGPTF--DEDNQ 110
>gi|93004423|gb|ABE97128.1| chloroplast PSII associated light-harvesting complex II protein
[Solanum lycopersicoides]
Length = 48
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/48 (95%), Positives = 46/48 (95%)
Query: 118 ASLLGEGITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALG 165
ASLLGE ITGKGILAQLNLETGIPIYEAEPLLLFFILF LLGAIGALG
Sbjct: 1 ASLLGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFNLLGAIGALG 48
Score = 36.6 bits (83), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 17/21 (80%), Positives = 18/21 (85%)
Query: 201 GKGALAQLNIETGIPINEIEP 221
GKG LAQLN+ETGIPI E EP
Sbjct: 10 GKGILAQLNLETGIPIYEAEP 30
>gi|93004415|gb|ABE97120.1| chloroplast PSII associated light-harvesting complex II protein
[Solanum chmielewskii]
gi|93004416|gb|ABE97121.1| chloroplast PSII associated light-harvesting complex II protein
[Solanum pimpinellifolium]
gi|93004418|gb|ABE97123.1| chloroplast PSII associated light-harvesting complex II protein
[Solanum habrochaites]
gi|93004422|gb|ABE97127.1| chloroplast PSII associated light-harvesting complex II protein
[Solanum pennellii]
Length = 47
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/47 (95%), Positives = 45/47 (95%)
Query: 118 ASLLGEGITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGAL 164
ASLLGE ITGKGILAQLNLETGIPIYEAEPLLLFFILF LLGAIGAL
Sbjct: 1 ASLLGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFNLLGAIGAL 47
Score = 37.0 bits (84), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 20/29 (68%), Positives = 21/29 (72%)
Query: 193 SALGLKEGGKGALAQLNIETGIPINEIEP 221
S LG GKG LAQLN+ETGIPI E EP
Sbjct: 2 SLLGEAITGKGILAQLNLETGIPIYEAEP 30
>gi|93004417|gb|ABE97122.1| chloroplast PSII associated light-harvesting complex II protein
[Solanum arcanum]
Length = 46
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/46 (95%), Positives = 44/46 (95%)
Query: 118 ASLLGEGITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGA 163
ASLLGE ITGKGILAQLNLETGIPIYEAEPLLLFFILF LLGAIGA
Sbjct: 1 ASLLGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFNLLGAIGA 46
Score = 37.0 bits (84), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 20/29 (68%), Positives = 21/29 (72%)
Query: 193 SALGLKEGGKGALAQLNIETGIPINEIEP 221
S LG GKG LAQLN+ETGIPI E EP
Sbjct: 2 SLLGEAITGKGILAQLNLETGIPIYEAEP 30
>gi|255081274|ref|XP_002507859.1| photosystem II 22 kDa protein, chloroplast precursor [Micromonas
sp. RCC299]
gi|226523135|gb|ACO69117.1| photosystem II 22 kDa protein, chloroplast precursor [Micromonas
sp. RCC299]
Length = 286
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 38/53 (71%)
Query: 102 KQNELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGIPIYEAEPLLLFFIL 154
K ELF GR+AM+GFA +L+GE +T +G L Q NLETG+P+ + E FF+L
Sbjct: 208 KPYELFNGRLAMLGFAFALVGEAVTKRGPLEQFNLETGVPVIDEELFGAFFLL 260
>gi|218196196|gb|EEC78623.1| hypothetical protein OsI_18672 [Oryza sativa Indica Group]
Length = 133
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/90 (57%), Positives = 57/90 (63%), Gaps = 11/90 (12%)
Query: 139 GIPIYEAEPLLLFFILFTLLGAIGALGDRGKF-VDEPDEPTGLGGAVIPPGKGLRSALGL 197
IPIYE EPLLL F LFTLLGAIG+ R F VD+P TGL AVI S +
Sbjct: 8 AIPIYEVEPLLLLFNLFTLLGAIGS---RDSFVVDQP--ATGLDKAVIA-----FSIISE 57
Query: 198 KEGGKGALAQLNIETGIPINEIEPLVLFNV 227
GK AL QLNIET IP+ EIE LVLFN+
Sbjct: 58 IVTGKVALTQLNIETSIPVTEIESLVLFNL 87
Score = 41.2 bits (95), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 28/40 (70%), Gaps = 2/40 (5%)
Query: 112 AMIGFAASLLGEGITGKGILAQLNLETGIPIYEAEPLLLF 151
A+I F S++ E +TGK L QLN+ET IP+ E E L+LF
Sbjct: 48 AVIAF--SIISEIVTGKVALTQLNIETSIPVTEIESLVLF 85
>gi|384252969|gb|EIE26444.1| hypothetical protein COCSUDRAFT_32166 [Coccomyxa subellipsoidea
C-169]
Length = 167
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 69/139 (49%), Gaps = 13/139 (9%)
Query: 107 FVGRVAMIGFAASLLGEGITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGD 166
FVGR+ ++ A LLGE ITGKG + L+ G+P++E EP+L ++ L+ A+
Sbjct: 24 FVGRLIVLVLGAVLLGERITGKGAVQALDHAVGVPLWEIEPVLGAMVVGLLIAAL--YPR 81
Query: 167 RGKFVDEPDEPTGLGGAVIPPGKGLRSALGLKE----------GGKGALAQLNIETGIP- 215
R + V++ G + + L GKGALA L+IETG+
Sbjct: 82 RKQLVEDAQRRQKEMGDWLADAQVWVRRLACVSLASTIVVEVVTGKGALALLDIETGVET 141
Query: 216 INEIEPLVLFNVIFFFVAA 234
++EIE F ++ F AA
Sbjct: 142 LSEIEAGAAFLIMLFLTAA 160
Score = 38.5 bits (88), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 30/51 (58%)
Query: 195 LGLKEGGKGALAQLNIETGIPINEIEPLVLFNVIFFFVAALNPGTGKFVTD 245
LG + GKGA+ L+ G+P+ EIEP++ V+ +AAL P + V D
Sbjct: 38 LGERITGKGAVQALDHAVGVPLWEIEPVLGAMVVGLLIAALYPRRKQLVED 88
Score = 37.4 bits (85), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Query: 82 ESKPKVEDGIFGTSGGFGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGIP 141
K VED + +++V R+A + A++++ E +TGKG LA L++ETG+
Sbjct: 81 RRKQLVEDAQRRQKEMGDWLADAQVWVRRLACVSLASTIVVEVVTGKGALALLDIETGVE 140
Query: 142 -IYEAEPLLLFFILFTLLGA 160
+ E E F I+ L A
Sbjct: 141 TLSEIEAGAAFLIMLFLTAA 160
>gi|302843810|ref|XP_002953446.1| hypothetical protein VOLCADRAFT_94261 [Volvox carteri f.
nagariensis]
gi|300261205|gb|EFJ45419.1| hypothetical protein VOLCADRAFT_94261 [Volvox carteri f.
nagariensis]
Length = 316
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/44 (61%), Positives = 36/44 (81%)
Query: 97 GFGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGI 140
G+GFTK+NELF GR+AM+GFAA+++GE TG+G L+QL GI
Sbjct: 230 GWGFTKRNELFHGRLAMLGFAAAVVGELKTGRGALSQLAGYLGI 273
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 99 GFTKQNELFVGRVAMIGFAASLLGEGITGK--GILAQLNLETGIPIYEAEPLLLFFILFT 156
FT++ E+FVGR+AM+GF A+ + E +T G + Q+ + TG+ +L+ +++
Sbjct: 126 AFTRRREIFVGRIAMVGFFATCVLEILTANHLGPIRQVQMWTGMDTATITAMLMGIVIYN 185
Query: 157 LLGAIG 162
LG +G
Sbjct: 186 ALGGLG 191
>gi|222630399|gb|EEE62531.1| hypothetical protein OsJ_17329 [Oryza sativa Japonica Group]
Length = 92
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 56/90 (62%), Gaps = 11/90 (12%)
Query: 139 GIPIYEAEPLLLFFILFTLLGAIGALGDRGKFV-DEPDEPTGLGGAVIPPGKGLRSALGL 197
IPIYE EPLLL F LFTLLG IG+ R FV D+P TGL AVI S +
Sbjct: 8 AIPIYEVEPLLLLFNLFTLLGTIGS---RDNFVVDQP--ATGLDKAVIA-----FSIISE 57
Query: 198 KEGGKGALAQLNIETGIPINEIEPLVLFNV 227
GK AL QLNIET IP+ EIE LVLFN+
Sbjct: 58 IVTGKVALTQLNIETSIPVTEIESLVLFNL 87
Score = 40.4 bits (93), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 28/40 (70%), Gaps = 2/40 (5%)
Query: 112 AMIGFAASLLGEGITGKGILAQLNLETGIPIYEAEPLLLF 151
A+I F S++ E +TGK L QLN+ET IP+ E E L+LF
Sbjct: 48 AVIAF--SIISEIVTGKVALTQLNIETSIPVTEIESLVLF 85
>gi|303282139|ref|XP_003060361.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226457832|gb|EEH55130.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 285
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 41/68 (60%), Gaps = 5/68 (7%)
Query: 92 FGTSGGF-GFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNL-ETGIPIYEAEPLL 149
F TS G GFT ELF+GR AM GFA + E +TG GILAQL L + G+P E L
Sbjct: 72 FDTSEGIAGFTPFAELFIGRTAMGGFATGCIQELLTGDGILAQLGLVQEGVP---NEFLF 128
Query: 150 LFFILFTL 157
FFI F L
Sbjct: 129 QFFIAFLL 136
>gi|428221961|ref|YP_007106131.1| Chlorophyll A-B binding protein [Synechococcus sp. PCC 7502]
gi|427995301|gb|AFY73996.1| Chlorophyll A-B binding protein [Synechococcus sp. PCC 7502]
Length = 99
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/43 (58%), Positives = 31/43 (72%)
Query: 96 GGFGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNLET 138
G FGF+ EL+ GR+AMIGF A+L GE TGKGIL Q+ + T
Sbjct: 19 GVFGFSNFAELWNGRMAMIGFVAALAGEVTTGKGILGQIGINT 61
>gi|159475200|ref|XP_001695711.1| hypothetical protein CHLREDRAFT_175221 [Chlamydomonas reinhardtii]
gi|158275722|gb|EDP01498.1| predicted protein [Chlamydomonas reinhardtii]
Length = 316
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 57/106 (53%), Gaps = 19/106 (17%)
Query: 70 SKTKAPPKTKKVESKP---------KVEDGIFGTSGGFGFTKQNELFVGRVAMIGFAASL 120
S T AP + V +P KV D + G SG +GFTK+NE+F GR+AM+GF +
Sbjct: 196 SPTFAPENLRDVARRPRGPPSDLPAKVGDWL-GISG-WGFTKRNEVFHGRLAMMGFLFAF 253
Query: 121 LGEGITGKGILAQLNLETGI----PIYEAEPLLLFFILFT--LLGA 160
+ E TG+G L Q+ GI Y A L FI+F+ +LGA
Sbjct: 254 INEMKTGRGALGQVAGYLGIIPDAAWYSA--CLNGFIVFSALMLGA 297
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 100 FTKQNELFVGRVAMIGFAASLLGEGITGK--GILAQLNLETGIPIYEAEPLLLFFILFTL 157
FT++ E+F+GR+AM+ FA S E T G + Q+ L +G+ L++ I + +
Sbjct: 129 FTRRREVFMGRIAMVAFAVSCGLEIFTADHLGPIRQVQLWSGLDESTVVALIMGIIAYNV 188
Query: 158 LGAIG 162
LG +G
Sbjct: 189 LGGLG 193
>gi|384249734|gb|EIE23215.1| hypothetical protein COCSUDRAFT_63572 [Coccomyxa subellipsoidea
C-169]
Length = 328
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 46/79 (58%), Gaps = 10/79 (12%)
Query: 82 ESKP---KVED--GIFGTSGGFGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNL 136
++KP KV D G+ G FGF E++VGR+AM+GF S++ E ITGKG L Q+
Sbjct: 50 DTKPEIAKVADSIGLPTDEGLFGFKPFPEVWVGRLAMMGFLTSVVEEFITGKGTLRQIGF 109
Query: 137 ETGIPIYEAEPLLLFFILF 155
ET + PL F ++F
Sbjct: 110 ET-----PSTPLFAFLLVF 123
Score = 38.5 bits (88), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 24/37 (64%)
Query: 98 FGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQL 134
F + + EL GR AMIGF +++ E TG+GIL QL
Sbjct: 274 FDYARNVELTNGRWAMIGFLTAIIIEAATGRGILVQL 310
>gi|303287480|ref|XP_003063029.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226455665|gb|EEH52968.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 307
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 75 PPKTKKVESKPKVEDGIFGTSGGFGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQL 134
PP VE + G+ + G FGFT EL+ GR+AM+GF L E TG GILAQ+
Sbjct: 51 PPALNAVERSAR-SMGLDTSEGVFGFTPFAELWTGRLAMMGFTVGLAEELWTGDGILAQI 109
Query: 135 NLETGIPI 142
+ PI
Sbjct: 110 GIACPNPI 117
>gi|443477681|ref|ZP_21067508.1| hypothetical protein Pse7429DRAFT_3157 [Pseudanabaena biceps PCC
7429]
gi|443017143|gb|ELS31654.1| hypothetical protein Pse7429DRAFT_3157 [Pseudanabaena biceps PCC
7429]
Length = 113
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Query: 95 SGGFGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGIPIYEAEPLLLFFIL 154
+G FGF+ E + GR+AMIG A E +TGKGILAQ+ + GI + A LFF
Sbjct: 39 AGVFGFSNFAETWNGRMAMIGLVAGFANEVLTGKGILAQVGITGGISVLFA----LFFTG 94
Query: 155 FTLLGAIG 162
FT+ +G
Sbjct: 95 FTVATLLG 102
>gi|302849018|ref|XP_002956040.1| hypothetical protein VOLCADRAFT_109992 [Volvox carteri f.
nagariensis]
gi|300258766|gb|EFJ43000.1| hypothetical protein VOLCADRAFT_109992 [Volvox carteri f.
nagariensis]
Length = 297
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 31/41 (75%)
Query: 96 GGFGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNL 136
G FGFT +E++VGR +MIGF +S++ E TGKG LAQ+ L
Sbjct: 53 GYFGFTPFSEMWVGRWSMIGFVSSIVVEFATGKGTLAQIGL 93
>gi|88911210|gb|ABD58895.1| chloroplast Lhc-like protein 2 [Mesostigma viride]
Length = 323
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 37/64 (57%), Gaps = 6/64 (9%)
Query: 81 VESKPKVEDGI-----FGTSGG-FGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQL 134
V S+P D I F TS G FGFT EL+ GR+AM+GFA E +TG GIL Q+
Sbjct: 69 VLSEPTPSDAIAQGMGFDTSDGIFGFTPFAELWAGRLAMMGFATGAAEELLTGHGILRQI 128
Query: 135 NLET 138
L T
Sbjct: 129 GLTT 132
Score = 37.7 bits (86), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Query: 66 ALFKSKTKAPPKTKKVES------KPKVEDGIFGTSGGFGFTKQNELFVGRVAMIGFAAS 119
A K++ +A K K VES + V G + + + E+ GR AM+GF A+
Sbjct: 234 AQLKARDEAFLKGKGVESVSAPTPRTPVSSGPASDLSAWSYARNVEMTNGRWAMLGFLAA 293
Query: 120 LLGEGITGKGILAQL 134
+ E TG GIL QL
Sbjct: 294 ITVEAATGNGILGQL 308
>gi|133902318|gb|ABO41847.1| photosystem II protein [Gossypium hirsutum]
Length = 59
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/64 (56%), Positives = 42/64 (65%), Gaps = 8/64 (12%)
Query: 1 MAQTMLLMSGVSTSHAG--NLKRDS-LVTFQTQMLRPKPFSHLMFNPLSNESLTAAAASS 57
MAQTML+MS S S + NLKRD L+ FQ Q L+PKP SH +FNP SN A+S
Sbjct: 1 MAQTMLVMSSTSVSTSHVVNLKRDHPLLHFQAQGLKPKPSSHFLFNPHSN-----TVAAS 55
Query: 58 SSKA 61
SSKA
Sbjct: 56 SSKA 59
>gi|168056098|ref|XP_001780059.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668557|gb|EDQ55162.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 222
Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 30/44 (68%)
Query: 91 IFGTSGGFGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQL 134
+ T GFG+T++NE+ GR AMIGF ++ E +TGKG LA L
Sbjct: 172 VVETEEGFGWTRKNEIINGRAAMIGFFMLIIQELVTGKGFLAGL 215
>gi|159486151|ref|XP_001701107.1| high intensity light-inducible lhc-like gene [Chlamydomonas
reinhardtii]
gi|54649972|dbj|BAD67137.1| Lhc-like protein Lhl4 [Chlamydomonas reinhardtii]
gi|54649974|dbj|BAD67138.1| Lhc-like protein Lhl4 [Chlamydomonas reinhardtii]
gi|158272001|gb|EDO97809.1| high intensity light-inducible lhc-like gene [Chlamydomonas
reinhardtii]
Length = 285
Score = 45.8 bits (107), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 33/48 (68%)
Query: 90 GIFGTSGGFGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNLE 137
G+ + G FGFT E +VGR +M+GF +S++ E TGKG LAQ+ L+
Sbjct: 45 GMDSSDGVFGFTPFAETWVGRWSMMGFVSSIVVEFATGKGTLAQVGLD 92
>gi|302191590|tpg|DAA33883.1| TPA_inf: stress-enhanced protein 2 [Cyanophora paradoxa]
Length = 180
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 30/43 (69%)
Query: 95 SGGFGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNLE 137
+G FGF +EL+ GR+AM+G A L E +TG+GI AQ+ L+
Sbjct: 101 TGRFGFGSNSELWNGRLAMLGLVAGLGQEAVTGQGIFAQIGLD 143
>gi|302191596|tpg|DAA33886.1| TPA_inf: stress-enhanced protein 3 [Glaucocystis nostochinearum]
Length = 187
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 37/64 (57%)
Query: 98 FGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGIPIYEAEPLLLFFILFTL 157
+GF+K E GR+AMIG +S + E +TG+ I QL++ETG+ + LL T
Sbjct: 111 YGFSKAAETVNGRIAMIGIVSSFVVEYLTGETIWEQLSIETGLEKSKLIGLLTITWAVTF 170
Query: 158 LGAI 161
L A+
Sbjct: 171 LAAL 174
>gi|302191594|tpg|DAA33885.1| TPA_inf: stress-enhanced protein 2 [Glaucocystis nostochinearum]
Length = 168
Score = 45.4 bits (106), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 41/67 (61%), Gaps = 3/67 (4%)
Query: 96 GGFGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGIPIYEAEPLLLFFILF 155
G FGF+ EL+ GR+AM+GF A++ E +TG+ I Q+ L+ P+ E +L FF+
Sbjct: 100 GNFGFSNNAELWNGRLAMLGFGAAITKEFLTGESIFGQVGLDR--PLDEV-LVLTFFLGL 156
Query: 156 TLLGAIG 162
T+ +G
Sbjct: 157 TVATMVG 163
>gi|302819500|ref|XP_002991420.1| LHC-related protein [Selaginella moellendorffii]
gi|300140813|gb|EFJ07532.1| LHC-related protein [Selaginella moellendorffii]
Length = 205
Score = 45.1 bits (105), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
Query: 104 NELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIG 162
E VGR AM+G A+L+ E +TGKGI QL L+ P+ P+LL F + G +G
Sbjct: 83 QERLVGRFAMVGVVAALVMEVVTGKGIFGQLGLD---PLRVRYPVLLGFTFLLVAGLVG 138
>gi|302813262|ref|XP_002988317.1| LHC-related protein [Selaginella moellendorffii]
gi|300144049|gb|EFJ10736.1| LHC-related protein [Selaginella moellendorffii]
Length = 205
Score = 45.1 bits (105), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
Query: 104 NELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIG 162
E VGR AM+G A+L+ E +TGKGI QL L+ P+ P+LL F + G +G
Sbjct: 83 QERLVGRFAMVGVVAALVMEVVTGKGIFGQLGLD---PLRVRYPVLLGFTFLLVAGLVG 138
>gi|255085648|ref|XP_002505255.1| light harvesting like protein [Micromonas sp. RCC299]
gi|226520524|gb|ACO66513.1| light harvesting like protein [Micromonas sp. RCC299]
Length = 278
Score = 44.7 bits (104), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 92 FGTSGGF-GFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGIPIYEAEPLLL 150
F TS G GFT ELF+GR AM GFA + E ITG GILAQL G+ E +
Sbjct: 64 FDTSEGIAGFTPFAELFIGRTAMGGFATGIAQELITGDGILAQL----GVRDLPNEQIFD 119
Query: 151 FFI 153
FF+
Sbjct: 120 FFV 122
>gi|428218023|ref|YP_007102488.1| hypothetical protein Pse7367_1782 [Pseudanabaena sp. PCC 7367]
gi|427989805|gb|AFY70060.1| hypothetical protein Pse7367_1782 [Pseudanabaena sp. PCC 7367]
Length = 126
Score = 44.7 bits (104), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 30/50 (60%)
Query: 85 PKVEDGIFGTSGGFGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQL 134
P + + FGFTK E F GR+AMIGF + L+ E ITG+G++ L
Sbjct: 74 PVTPEPYYQNESKFGFTKFAETFNGRLAMIGFVSLLITEMITGQGLITNL 123
>gi|411119084|ref|ZP_11391464.1| Chlorophyll A-B binding protein [Oscillatoriales cyanobacterium
JSC-12]
gi|410710947|gb|EKQ68454.1| Chlorophyll A-B binding protein [Oscillatoriales cyanobacterium
JSC-12]
Length = 58
Score = 44.3 bits (103), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 28/39 (71%)
Query: 98 FGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNL 136
FGFT Q EL+ GR AMIGF A+L+ E IT +G+L L L
Sbjct: 19 FGFTPQAELWNGRFAMIGFVAALITELITNQGVLHFLGL 57
>gi|22297989|ref|NP_681236.1| CAB/ELIP/HLIP superfamily protein [Thermosynechococcus elongatus
BP-1]
gi|22294167|dbj|BAC07998.1| CAB/ELIP/HLIP superfamily protein [Thermosynechococcus elongatus
BP-1]
Length = 56
Score = 44.3 bits (103), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 27/34 (79%)
Query: 98 FGFTKQNELFVGRVAMIGFAASLLGEGITGKGIL 131
FGFT Q E++ GR+AMIGF A+LL E IT +G+L
Sbjct: 17 FGFTPQAEIWNGRLAMIGFVAALLTELITKQGVL 50
>gi|87302267|ref|ZP_01085092.1| putative high light inducible protein [Synechococcus sp. WH 5701]
gi|87283192|gb|EAQ75148.1| putative high light inducible protein [Synechococcus sp. WH 5701]
Length = 73
Score = 44.3 bits (103), Expect = 0.052, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 34/53 (64%)
Query: 84 KPKVEDGIFGTSGGFGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNL 136
+P++ G+ G+GF ++ EL GR+AM+GF +L E +G+GIL Q+ L
Sbjct: 16 EPRMYRASPGSESGWGFHRRAELLNGRLAMLGFVIGVLVEAFSGQGILHQIGL 68
>gi|318041094|ref|ZP_07973050.1| CAB/ELIP/HLIP superfamily protein [Synechococcus sp. CB0101]
Length = 61
Score = 43.9 bits (102), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 28/38 (73%)
Query: 98 FGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLN 135
+GFT Q E + GR+AM+GF +L E +TG+G+LAQL
Sbjct: 18 WGFTDQAERWNGRLAMLGFVIALATELLTGQGVLAQLR 55
>gi|220907739|ref|YP_002483050.1| CAB/ELIP/HLIP superfamily protein [Cyanothece sp. PCC 7425]
gi|219864350|gb|ACL44689.1| CAB/ELIP/HLIP superfamily protein [Cyanothece sp. PCC 7425]
Length = 55
Score = 43.9 bits (102), Expect = 0.060, Method: Composition-based stats.
Identities = 19/34 (55%), Positives = 27/34 (79%)
Query: 98 FGFTKQNELFVGRVAMIGFAASLLGEGITGKGIL 131
FGFT Q E++ GR+AMIGF A++L E +T +G+L
Sbjct: 16 FGFTPQAEIWNGRLAMIGFVAAILTEVLTKQGVL 49
>gi|443328437|ref|ZP_21057034.1| Chlorophyll A-B binding protein [Xenococcus sp. PCC 7305]
gi|442791891|gb|ELS01381.1| Chlorophyll A-B binding protein [Xenococcus sp. PCC 7305]
Length = 56
Score = 43.5 bits (101), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 32/53 (60%), Gaps = 6/53 (11%)
Query: 85 PKVEDGIFGTSGGFGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNLE 137
PK+ED FGF K E GR AMIGF +++ E +TGKG+LA L L+
Sbjct: 10 PKLEDP------KFGFNKYAERLNGRAAMIGFTLAIVIEYLTGKGLLAWLGLQ 56
>gi|428218002|ref|YP_007102467.1| hypothetical protein Pse7367_1761 [Pseudanabaena sp. PCC 7367]
gi|427989784|gb|AFY70039.1| hypothetical protein Pse7367_1761 [Pseudanabaena sp. PCC 7367]
Length = 105
Score = 43.5 bits (101), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 29/43 (67%)
Query: 96 GGFGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNLET 138
G FGF+ E++ GR+AM+G A GE +TGKGIL Q+ + T
Sbjct: 19 GVFGFSNFAEVWNGRMAMLGVVAGFAGEALTGKGILEQVGIST 61
>gi|359463984|ref|ZP_09252547.1| high light inducible protein [Acaryochloris sp. CCMEE 5410]
Length = 82
Score = 43.5 bits (101), Expect = 0.088, Method: Composition-based stats.
Identities = 21/38 (55%), Positives = 27/38 (71%)
Query: 98 FGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLN 135
+GFT E F GR+AM GF +L+ E +TGKGIL QL+
Sbjct: 39 WGFTSYAETFSGRLAMYGFFIALVTEVLTGKGILGQLS 76
>gi|168015854|ref|XP_001760465.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688479|gb|EDQ74856.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 233
Score = 43.1 bits (100), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 27/34 (79%)
Query: 104 NELFVGRVAMIGFAASLLGEGITGKGILAQLNLE 137
EL VGR+AM+GFAA+++ E ITGKG+L QL +
Sbjct: 108 QELQVGRLAMVGFAAAVIMEVITGKGVLGQLGIN 141
>gi|428201033|ref|YP_007079622.1| Chlorophyll A-B binding protein [Pleurocapsa sp. PCC 7327]
gi|427978465|gb|AFY76065.1| Chlorophyll A-B binding protein [Pleurocapsa sp. PCC 7327]
Length = 60
Score = 43.1 bits (100), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 23/40 (57%), Positives = 26/40 (65%)
Query: 98 FGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNLE 137
FGF E GR AMIGF +LL E ITGKG+LA L L+
Sbjct: 21 FGFNDYAERLNGRAAMIGFVLTLLIEYITGKGLLAWLGLK 60
>gi|434386688|ref|YP_007097299.1| Chlorophyll A-B binding protein [Chamaesiphon minutus PCC 6605]
gi|428017678|gb|AFY93772.1| Chlorophyll A-B binding protein [Chamaesiphon minutus PCC 6605]
Length = 68
Score = 43.1 bits (100), Expect = 0.11, Method: Composition-based stats.
Identities = 19/34 (55%), Positives = 27/34 (79%)
Query: 98 FGFTKQNELFVGRVAMIGFAASLLGEGITGKGIL 131
+GFT Q E++ GR AMIGF A+LL E ++G+G+L
Sbjct: 20 WGFTPQAEIWNGRFAMIGFVAALLTEYLSGQGVL 53
>gi|425470171|ref|ZP_18849041.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9701]
gi|389884283|emb|CCI35406.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9701]
Length = 70
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 29/41 (70%)
Query: 94 TSGGFGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQL 134
+S G GFTK+ E GR+AMIGF + L E +TGKGI+A +
Sbjct: 27 SSSGLGFTKKAEKLNGRLAMIGFVSLLAIEVLTGKGIIAWI 67
>gi|242047418|ref|XP_002461455.1| hypothetical protein SORBIDRAFT_02g002950 [Sorghum bicolor]
gi|241924832|gb|EER97976.1| hypothetical protein SORBIDRAFT_02g002950 [Sorghum bicolor]
Length = 111
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 42/97 (43%), Gaps = 8/97 (8%)
Query: 43 NPLSNESLTAAAASSSSKAFSTVALFKSKTKAPPKTKKVESKPKVEDGIFGTSGGFGFTK 102
PL L A S + VAL S K PP + +PK+ + G FT+
Sbjct: 16 RPLCRNRL--APCLPSPRPARAVALRVSAAKLPPGVEVPRVQPKLSEPFLG------FTQ 67
Query: 103 QNELFVGRVAMIGFAASLLGEGITGKGILAQLNLETG 139
E++ R MIG + + E + KGIL + +E G
Sbjct: 68 TAEIWNSRACMIGLIGTFIVELVLNKGILQMIGVEVG 104
>gi|428212095|ref|YP_007085239.1| Chlorophyll A-B binding protein [Oscillatoria acuminata PCC 6304]
gi|428000476|gb|AFY81319.1| Chlorophyll A-B binding protein [Oscillatoria acuminata PCC 6304]
Length = 59
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 27/39 (69%)
Query: 98 FGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNL 136
FGF K E GR AMIGFA +LL E +TG+G+L+ L L
Sbjct: 20 FGFNKYAERLNGRAAMIGFALTLLIEYLTGQGLLSWLGL 58
>gi|428223317|ref|YP_007107487.1| Chlorophyll A-B binding protein [Synechococcus sp. PCC 7502]
gi|427996657|gb|AFY75352.1| Chlorophyll A-B binding protein [Synechococcus sp. PCC 7502]
Length = 55
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 27/39 (69%)
Query: 98 FGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNL 136
FGF E + GR+AMIGF +L+ E +TG GIL+QL L
Sbjct: 16 FGFNAFAETWNGRLAMIGFLTALINEYVTGHGILSQLGL 54
>gi|434398842|ref|YP_007132846.1| putative CAB/ELIP/HLIP family protein [Stanieria cyanosphaera PCC
7437]
gi|428269939|gb|AFZ35880.1| putative CAB/ELIP/HLIP family protein [Stanieria cyanosphaera PCC
7437]
Length = 47
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 29/39 (74%)
Query: 98 FGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNL 136
GFT+ E++ GR+AM+GF + +L E ITG+GIL QL L
Sbjct: 8 LGFTRFAEIWNGRLAMLGFVSVVLIELITGRGILTQLGL 46
>gi|87303550|ref|ZP_01086333.1| possible high light inducible protein [Synechococcus sp. WH 5701]
gi|87281963|gb|EAQ73926.1| possible high light inducible protein [Synechococcus sp. WH 5701]
Length = 71
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 26/30 (86%)
Query: 105 ELFVGRVAMIGFAASLLGEGITGKGILAQL 134
EL GRVAM+GF+A+++GE +TGKGI+ QL
Sbjct: 33 ELLNGRVAMLGFSAAIVGEWLTGKGIVGQL 62
>gi|218438949|ref|YP_002377278.1| CAB/ELIP/HLIP superfamily [Cyanothece sp. PCC 7424]
gi|218171677|gb|ACK70410.1| CAB/ELIP/HLIP superfamily [Cyanothece sp. PCC 7424]
Length = 46
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 30/39 (76%)
Query: 98 FGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNL 136
FGFT E++ GR+AMIGFAA+L+ E ++G+G+L NL
Sbjct: 7 FGFTSFAEVWNGRLAMIGFAAALIIELVSGQGLLHFWNL 45
>gi|425455756|ref|ZP_18835467.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9807]
gi|389803285|emb|CCI17763.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9807]
Length = 70
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 29/41 (70%)
Query: 94 TSGGFGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQL 134
+S G GFTK+ E GR+AMIGF + L E +TGKGI+A +
Sbjct: 27 SSSGLGFTKKAEKLNGRLAMIGFVSLLAIELLTGKGIIAWI 67
>gi|158338118|ref|YP_001519294.1| high light inducible protein [Acaryochloris marina MBIC11017]
gi|158308359|gb|ABW29976.1| high light inducible protein [Acaryochloris marina MBIC11017]
Length = 51
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 27/38 (71%)
Query: 98 FGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLN 135
+GFT E F GR+AM GF +L+ E +TGKGIL QL+
Sbjct: 8 WGFTSYAETFSGRLAMYGFFIALVTEVLTGKGILGQLS 45
>gi|37521012|ref|NP_924389.1| CAB/ELIP/HLIP-related protein [Gloeobacter violaceus PCC 7421]
gi|35212008|dbj|BAC89384.1| CAB/ELIP/HLIP-related protein [Gloeobacter violaceus PCC 7421]
Length = 52
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 28/39 (71%)
Query: 98 FGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNL 136
FGF EL GR+AMIGFAA+L+ E TGKG+L+ L L
Sbjct: 13 FGFNPYAELLNGRLAMIGFAAALVVELATGKGVLSFLGL 51
>gi|332709854|ref|ZP_08429810.1| hypothetical protein LYNGBM3L_46230 [Moorea producens 3L]
gi|332351225|gb|EGJ30809.1| hypothetical protein LYNGBM3L_46230 [Moorea producens 3L]
Length = 48
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 27/39 (69%)
Query: 98 FGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNL 136
FGFT +E + GR+AM+GFA L E ITG GIL QL L
Sbjct: 9 FGFTNFSETWNGRLAMLGFAIGLATELITGHGILEQLGL 47
>gi|113955174|ref|YP_731055.1| high light inducible protein [Synechococcus sp. CC9311]
gi|113882525|gb|ABI47483.1| putative high light inducible protein [Synechococcus sp. CC9311]
Length = 78
Score = 42.7 bits (99), Expect = 0.15, Method: Composition-based stats.
Identities = 20/35 (57%), Positives = 26/35 (74%)
Query: 102 KQNELFVGRVAMIGFAASLLGEGITGKGILAQLNL 136
K+ ELF GR AMIGF ++ EG+TG+GIL Q+ L
Sbjct: 25 KKVELFNGRAAMIGFVIGVITEGLTGQGILHQIGL 59
>gi|428224343|ref|YP_007108440.1| CAB/ELIP/HLIP family protein [Geitlerinema sp. PCC 7407]
gi|427984244|gb|AFY65388.1| CAB/ELIP/HLIP family protein [Geitlerinema sp. PCC 7407]
Length = 47
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 28/39 (71%)
Query: 98 FGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNL 136
FGFT E + GR+AM+GF L+ E +TG+GIL+QL L
Sbjct: 8 FGFTNFAETWNGRLAMLGFVVGLITELVTGQGILSQLGL 46
>gi|434398540|ref|YP_007132544.1| HLIP, single helix LHC light protein [Stanieria cyanosphaera PCC
7437]
gi|428269637|gb|AFZ35578.1| HLIP, single helix LHC light protein [Stanieria cyanosphaera PCC
7437]
Length = 56
Score = 42.4 bits (98), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 33/55 (60%), Gaps = 6/55 (10%)
Query: 83 SKPKVEDGIFGTSGGFGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNLE 137
+ PK+ED FGF E GR AMIGFA +L+ E +TG+G+L+ L L+
Sbjct: 8 TTPKLEDP------KFGFNDYAERLNGRAAMIGFALTLVIEYLTGQGLLSWLGLQ 56
>gi|428312165|ref|YP_007123142.1| Chlorophyll A-B binding protein [Microcoleus sp. PCC 7113]
gi|428253777|gb|AFZ19736.1| Chlorophyll A-B binding protein [Microcoleus sp. PCC 7113]
Length = 50
Score = 42.4 bits (98), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 27/34 (79%)
Query: 98 FGFTKQNELFVGRVAMIGFAASLLGEGITGKGIL 131
FGFT Q E + GR+AMIGF A+L+ E +TG+G+L
Sbjct: 11 FGFTPQAENWNGRLAMIGFVAALITEFVTGQGVL 44
>gi|352094548|ref|ZP_08955719.1| hypothetical protein Syn8016DRAFT_1062 [Synechococcus sp. WH 8016]
gi|351680888|gb|EHA64020.1| hypothetical protein Syn8016DRAFT_1062 [Synechococcus sp. WH 8016]
Length = 78
Score = 42.4 bits (98), Expect = 0.17, Method: Composition-based stats.
Identities = 20/35 (57%), Positives = 26/35 (74%)
Query: 102 KQNELFVGRVAMIGFAASLLGEGITGKGILAQLNL 136
K+ ELF GR AMIGF ++ EG+TG+GIL Q+ L
Sbjct: 25 KKVELFNGRAAMIGFVIGVITEGLTGQGILHQIGL 59
>gi|428213152|ref|YP_007086296.1| Chlorophyll A-B binding protein [Oscillatoria acuminata PCC 6304]
gi|428001533|gb|AFY82376.1| Chlorophyll A-B binding protein [Oscillatoria acuminata PCC 6304]
Length = 72
Score = 42.4 bits (98), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 71 KTKAPPKTKKVESKPKVEDGIFGTSGGFGFTKQNELFVGRVAMIGFAASLLGEGITGKGI 130
+ K P ++ +P + G + +GFT E++ GR+AMIGF A+ L E TG+G
Sbjct: 2 QVKERPDVREEVKQPYFDQG---SQWKWGFTPSAEIWNGRLAMIGFLAATLIEIATGQGY 58
Query: 131 LAQLNLETGIPI 142
L L TG I
Sbjct: 59 LRFLGFLTGTDI 70
>gi|186686394|ref|YP_001869590.1| high light inducible protein [Nostoc punctiforme PCC 73102]
gi|186468846|gb|ACC84647.1| CAB/ELIP/HLIP superfamily of protein [Nostoc punctiforme PCC 73102]
Length = 61
Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 36/55 (65%), Gaps = 4/55 (7%)
Query: 77 KTKKVESKPKVEDGIFGTSGGFGFTKQNELFVGRVAMIGFAASLLGEGITGKGIL 131
T KV + P +ED + +GFT Q E++ GR+AMIGF+A++L E +G+G L
Sbjct: 5 STTKV-TTPVIEDR---NAWRWGFTPQAEIWNGRLAMIGFSAAVLVELFSGQGFL 55
>gi|425462260|ref|ZP_18841734.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9808]
gi|389824670|emb|CCI26149.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9808]
Length = 70
Score = 42.0 bits (97), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 29/41 (70%)
Query: 94 TSGGFGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQL 134
+S GFTK+ E GR+AMIGF + L+ E +TGKGI+A +
Sbjct: 27 SSSSLGFTKKAEKLNGRLAMIGFVSLLVIELLTGKGIIAWI 67
>gi|427711209|ref|YP_007059833.1| Chlorophyll A-B binding protein [Synechococcus sp. PCC 6312]
gi|427375338|gb|AFY59290.1| Chlorophyll A-B binding protein [Synechococcus sp. PCC 6312]
Length = 57
Score = 42.0 bits (97), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 27/34 (79%)
Query: 98 FGFTKQNELFVGRVAMIGFAASLLGEGITGKGIL 131
FGFT Q E++ GR+AMIGF A+L+ E +T +G+L
Sbjct: 18 FGFTPQAEIWNGRLAMIGFVAALVTELLTKQGVL 51
>gi|307105347|gb|EFN53597.1| hypothetical protein CHLNCDRAFT_136822 [Chlorella variabilis]
Length = 207
Score = 42.0 bits (97), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 38/70 (54%), Gaps = 8/70 (11%)
Query: 100 FTKQNELFVGRVAMIGFAASLLGEGITGKGILAQ--------LNLETGIPIYEAEPLLLF 151
FT++ E +GRVA +GFAASL+GE + G G + Q L+ ETGI L
Sbjct: 27 FTRRREHAIGRVAAVGFAASLVGELLAGIGPITQASSTEAGYLHYETGISYKWLYLALAA 86
Query: 152 FILFTLLGAI 161
+ LLGA+
Sbjct: 87 LTGWGLLGAV 96
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 41/80 (51%), Gaps = 9/80 (11%)
Query: 100 FTKQNELFVGRVAMIGFAASLLGEGIT-GKGILAQLNL------ETGIPIYEAEPLLLFF 152
F QNE+ VGR+AM GFA + + E + G+ LA L L T P + +LLF
Sbjct: 128 FLVQNEVLVGRIAMAGFAGACVLEYLWGGEAPLAHLGLIQPGTQLTSAPWWVGGLVLLF- 186
Query: 153 ILFTLLGAIGALGDRGKFVD 172
L LG ALGDR + D
Sbjct: 187 -LANGLGLFSALGDRSRDDD 205
>gi|412991209|emb|CCO16054.1| photosystem II 22 kda polypeptide (ISS) [Bathycoccus prasinos]
Length = 264
Score = 42.0 bits (97), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Query: 102 KQNELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGIPIYEAEPLLLFFI---LFTLL 158
K+ E+F GR+AM+G AS +G+ +G + Q+ E G+P+ + E L F+ F L+
Sbjct: 190 KKYEIFNGRLAMLGITASFIGDYFLAEGPMEQVAQELGVPVIDQEIFALVFLSAASFLLV 249
Query: 159 GAIGALGDRG 168
+ +G R
Sbjct: 250 STLVRVGRRA 259
>gi|427702171|ref|YP_007045393.1| hypothetical protein Cyagr_0866 [Cyanobium gracile PCC 6307]
gi|427345339|gb|AFY28052.1| hypothetical protein Cyagr_0866 [Cyanobium gracile PCC 6307]
Length = 97
Score = 42.0 bits (97), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 38/73 (52%)
Query: 69 KSKTKAPPKTKKVESKPKVEDGIFGTSGGFGFTKQNELFVGRVAMIGFAASLLGEGITGK 128
+ ++A P +P++ G+ G+GF + E GR+AM+GF L E +TG
Sbjct: 23 RWDSEASPLLDPQVIEPRMYLASPGSESGWGFHGRAERLNGRLAMLGFGIGLTIEALTGS 82
Query: 129 GILAQLNLETGIP 141
GIL Q+ L +P
Sbjct: 83 GILGQMGLGALLP 95
>gi|411119186|ref|ZP_11391566.1| Chlorophyll A-B binding protein [Oscillatoriales cyanobacterium
JSC-12]
gi|410711049|gb|EKQ68556.1| Chlorophyll A-B binding protein [Oscillatoriales cyanobacterium
JSC-12]
Length = 69
Score = 42.0 bits (97), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 25/34 (73%)
Query: 98 FGFTKQNELFVGRVAMIGFAASLLGEGITGKGIL 131
FGF KQ+EL GR+AM+GF A LL E TG G++
Sbjct: 30 FGFNKQSELLNGRLAMLGFVALLLLEVFTGHGVI 63
>gi|113953915|ref|YP_730298.1| high light inducible protein [Synechococcus sp. CC9311]
gi|113881266|gb|ABI46224.1| possible high light inducible protein [Synechococcus sp. CC9311]
Length = 106
Score = 42.0 bits (97), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 51/110 (46%), Gaps = 7/110 (6%)
Query: 27 FQTQMLRPKPFSHLMFNPLSNESLTAAAASSSSKAFSTVALFKSKTKAPPKTKKVESKPK 86
F T+ R +PF L P++ +L + +AF +P+
Sbjct: 4 FLTERSRHRPFWSLSETPMTTTTL-----RYNGRAFIYAPTSLVARDGEEHGNVYAKEPR 58
Query: 87 VEDGIFGTSGGFGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNL 136
+E + + G+GF ++ E +GR+AMIGF A+ E I+G+G L + L
Sbjct: 59 LE--LATPNAGWGFHERAEKLIGRLAMIGFVAATATELISGEGWLRTIGL 106
>gi|425450765|ref|ZP_18830588.1| Genome sequencing data, contig C311 [Microcystis aeruginosa PCC
7941]
gi|389768260|emb|CCI06586.1| Genome sequencing data, contig C311 [Microcystis aeruginosa PCC
7941]
Length = 56
Score = 42.0 bits (97), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 31/53 (58%), Gaps = 6/53 (11%)
Query: 85 PKVEDGIFGTSGGFGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNLE 137
PK+ED FGF E GR AMIGF +LL E +TG+G+L+ L L+
Sbjct: 10 PKLEDP------KFGFNDYAERLNGRAAMIGFVITLLIEYLTGQGLLSWLGLQ 56
>gi|434387735|ref|YP_007098346.1| Chlorophyll A-B binding protein [Chamaesiphon minutus PCC 6605]
gi|428018725|gb|AFY94819.1| Chlorophyll A-B binding protein [Chamaesiphon minutus PCC 6605]
Length = 52
Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 27/39 (69%)
Query: 98 FGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNL 136
FGFT EL GR+AMIGF A+L+ E +TG+G L L L
Sbjct: 13 FGFTPSAELLNGRLAMIGFVAALITELVTGQGTLHFLGL 51
>gi|166364945|ref|YP_001657218.1| CAB/ELIP/HLIP-related protein [Microcystis aeruginosa NIES-843]
gi|390437845|ref|ZP_10226362.1| Genome sequencing data, contig C311 [Microcystis sp. T1-4]
gi|422302656|ref|ZP_16390017.1| Genome sequencing data, contig C311 [Microcystis aeruginosa PCC
9806]
gi|425437893|ref|ZP_18818305.1| Genome sequencing data, contig C311 [Microcystis aeruginosa PCC
9432]
gi|425442899|ref|ZP_18823133.1| Genome sequencing data, contig C311 [Microcystis aeruginosa PCC
9717]
gi|425444998|ref|ZP_18825038.1| Genome sequencing data, contig C311 [Microcystis aeruginosa PCC
9443]
gi|425456882|ref|ZP_18836588.1| Genome sequencing data, contig C311 [Microcystis aeruginosa PCC
9807]
gi|425465516|ref|ZP_18844825.1| Genome sequencing data, contig C311 [Microcystis aeruginosa PCC
9809]
gi|425471758|ref|ZP_18850609.1| Genome sequencing data, contig C311 [Microcystis aeruginosa PCC
9701]
gi|443651819|ref|ZP_21130752.1| high light inducible protein [Microcystis aeruginosa DIANCHI905]
gi|159028525|emb|CAO87331.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
gi|166087318|dbj|BAG02026.1| CAB/ELIP/HLIP-related protein [Microcystis aeruginosa NIES-843]
gi|389677026|emb|CCH94000.1| Genome sequencing data, contig C311 [Microcystis aeruginosa PCC
9432]
gi|389715932|emb|CCH99766.1| Genome sequencing data, contig C311 [Microcystis aeruginosa PCC
9717]
gi|389735113|emb|CCI01333.1| Genome sequencing data, contig C311 [Microcystis aeruginosa PCC
9443]
gi|389788064|emb|CCI16572.1| Genome sequencing data, contig C311 [Microcystis aeruginosa PCC
9806]
gi|389801919|emb|CCI18976.1| Genome sequencing data, contig C311 [Microcystis aeruginosa PCC
9807]
gi|389832226|emb|CCI24334.1| Genome sequencing data, contig C311 [Microcystis aeruginosa PCC
9809]
gi|389838780|emb|CCI30486.1| Genome sequencing data, contig C311 [Microcystis sp. T1-4]
gi|389882262|emb|CCI37227.1| Genome sequencing data, contig C311 [Microcystis aeruginosa PCC
9701]
gi|443334460|gb|ELS48972.1| high light inducible protein [Microcystis aeruginosa DIANCHI905]
Length = 56
Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 31/53 (58%), Gaps = 6/53 (11%)
Query: 85 PKVEDGIFGTSGGFGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNLE 137
PK+ED FGF E GR AMIGF +LL E +TG+G+L+ L L+
Sbjct: 10 PKLEDP------KFGFNDYAERLNGRAAMIGFVITLLIEYLTGQGLLSWLGLQ 56
>gi|434405381|ref|YP_007148266.1| Chlorophyll A-B binding protein [Cylindrospermum stagnale PCC 7417]
gi|428259636|gb|AFZ25586.1| Chlorophyll A-B binding protein [Cylindrospermum stagnale PCC 7417]
Length = 61
Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
Query: 78 TKKVESKPKVEDGIFGTSGGFGFTKQNELFVGRVAMIGFAASLLGEGITGKGIL 131
TK + + P ED + +GFT Q E++ GR+AMIGF A+ L E +G+G L
Sbjct: 5 TKTITNTPVAEDR---NAWRWGFTPQAEIWNGRLAMIGFLAAALIELASGQGFL 55
>gi|307151098|ref|YP_003886482.1| high intensity light-inducible lhc-like protein [Cyanothece sp. PCC
7822]
gi|306981326|gb|ADN13207.1| high intensity light-inducible lhc-like protein [Cyanothece sp. PCC
7822]
Length = 47
Score = 41.6 bits (96), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 28/39 (71%)
Query: 98 FGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNL 136
FGFT E + GR+AM+GF +L E +TGKGIL+QL L
Sbjct: 8 FGFTSFAENWNGRLAMLGFVIGILTELLTGKGILSQLGL 46
>gi|434393236|ref|YP_007128183.1| high light inducible protein [Gloeocapsa sp. PCC 7428]
gi|428265077|gb|AFZ31023.1| high light inducible protein [Gloeocapsa sp. PCC 7428]
Length = 59
Score = 41.6 bits (96), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 36/55 (65%), Gaps = 4/55 (7%)
Query: 77 KTKKVESKPKVEDGIFGTSGGFGFTKQNELFVGRVAMIGFAASLLGEGITGKGIL 131
T KV + P +ED + +GFT Q E++ GR+AMIGF A++L E +G+G+L
Sbjct: 3 NTTKV-TTPVMEDR---NAWRWGFTPQAEIWNGRLAMIGFLAAVLIELFSGQGVL 53
>gi|302191598|tpg|DAA33887.1| TPA_inf: stress-enhanced protein 4 [Glaucocystis nostochinearum]
Length = 114
Score = 41.6 bits (96), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 29/47 (61%)
Query: 92 FGTSGGFGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNLET 138
F + +GF+ E F GR AMIG +L+ E + GKGI+ QL +++
Sbjct: 15 FESDSFYGFSYNAERFNGRAAMIGLVLALITEYLNGKGIMGQLGIDS 61
>gi|116781259|gb|ABK22027.1| unknown [Picea sitchensis]
Length = 177
Score = 41.6 bits (96), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 86 KVEDGIFGTSGGFGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNL 136
K+ED T FGFT +NE+ GR AM GFA LL E TG + Q+ +
Sbjct: 117 KIEDQASQTKV-FGFTPKNEISNGRWAMFGFAVGLLTEYATGSNFVDQMKI 166
>gi|428207888|ref|YP_007092241.1| ferrochelatase [Chroococcidiopsis thermalis PCC 7203]
gi|428009809|gb|AFY88372.1| ferrochelatase [Chroococcidiopsis thermalis PCC 7203]
Length = 387
Score = 41.2 bits (95), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 40/83 (48%), Gaps = 17/83 (20%)
Query: 49 SLTAAAASSSSKAFSTVALFKSKTKAPPKTKKVESKPKVEDGIFGTSGGFGFTKQNELFV 108
LT A +S S S V+ K + K P+ + +G T E++
Sbjct: 316 DLTIEALNSPSVKLSQVSQMKKRVKMYPQER----------------WQWGMTTSAEIWN 359
Query: 109 GRVAMIGFAASLLGEGITGKGIL 131
GR+AM+GF A L+ E ITGKG+L
Sbjct: 360 GRIAMLGFIA-LIIELITGKGLL 381
>gi|218245712|ref|YP_002371083.1| CAB/ELIP/HLIP family protein [Cyanothece sp. PCC 8801]
gi|257058757|ref|YP_003136645.1| high intensity light-inducible lhc-like protein [Cyanothece sp. PCC
8802]
gi|218166190|gb|ACK64927.1| CAB/ELIP/HLIP family protein [Cyanothece sp. PCC 8801]
gi|256588923|gb|ACU99809.1| high intensity light-inducible lhc-like protein [Cyanothece sp. PCC
8802]
Length = 47
Score = 41.2 bits (95), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 28/39 (71%)
Query: 98 FGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNL 136
FGFT E + GR+AM+GF +L E +TGKGIL+QL L
Sbjct: 8 FGFTSFAENWNGRLAMLGFIIGILTELMTGKGILSQLGL 46
>gi|425443924|ref|ZP_18823987.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9443]
gi|389733007|emb|CCI03161.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9443]
Length = 70
Score = 41.2 bits (95), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 28/41 (68%)
Query: 94 TSGGFGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQL 134
+S GFTK+ E GR+AMIGF + L E +TGKGI+A +
Sbjct: 27 SSSSLGFTKKAEKLNGRLAMIGFVSLLAIEVLTGKGIIAWI 67
>gi|427415575|ref|ZP_18905758.1| Chlorophyll A-B binding protein [Leptolyngbya sp. PCC 7375]
gi|425758288|gb|EKU99140.1| Chlorophyll A-B binding protein [Leptolyngbya sp. PCC 7375]
Length = 54
Score = 41.2 bits (95), Expect = 0.39, Method: Composition-based stats.
Identities = 21/49 (42%), Positives = 30/49 (61%)
Query: 83 SKPKVEDGIFGTSGGFGFTKQNELFVGRVAMIGFAASLLGEGITGKGIL 131
SK K+ F +GFT Q EL+ GR+AMIGF +L E ++ +G+L
Sbjct: 4 SKKKISSSQFRNGWLWGFTPQAELWNGRLAMIGFVCALTIEVLSSQGVL 52
>gi|427702282|ref|YP_007045504.1| Chlorophyll A-B binding protein [Cyanobium gracile PCC 6307]
gi|427345450|gb|AFY28163.1| Chlorophyll A-B binding protein [Cyanobium gracile PCC 6307]
Length = 96
Score = 41.2 bits (95), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 20/32 (62%), Positives = 24/32 (75%)
Query: 105 ELFVGRVAMIGFAASLLGEGITGKGILAQLNL 136
E GRVAMIGF A+L+GE TG+GI+ QL L
Sbjct: 58 ERLNGRVAMIGFLAALIGEAFTGRGIVGQLGL 89
>gi|88809622|ref|ZP_01125129.1| putative high light inducible protein [Synechococcus sp. WH 7805]
gi|88786372|gb|EAR17532.1| putative high light inducible protein [Synechococcus sp. WH 7805]
Length = 87
Score = 41.2 bits (95), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Query: 77 KTKKVESKPKVEDGIFGTSGGFGFTKQN----ELFVGRVAMIGFAASLLGEGITGKGILA 132
+ K+V ++ +D F S ++ E F GR AM+GF ++ EG+TG+GIL
Sbjct: 5 ERKQVMTRNSAQDSWFQGSAARAIHEEQLERVERFNGRAAMLGFVIGVITEGLTGQGILH 64
Query: 133 QLNL 136
Q+ L
Sbjct: 65 QIGL 68
>gi|427724661|ref|YP_007071938.1| high intensity light-inducible lhc-like protein [Leptolyngbya sp.
PCC 7376]
gi|427356381|gb|AFY39104.1| high intensity light-inducible lhc-like protein [Leptolyngbya sp.
PCC 7376]
Length = 47
Score = 41.2 bits (95), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 28/39 (71%)
Query: 98 FGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNL 136
FGF+ E + GR+AM+GF +L E +TGKGILAQL L
Sbjct: 8 FGFSLFAENWNGRLAMLGFVIGILTEVLTGKGILAQLGL 46
>gi|428776933|ref|YP_007168720.1| CAB/ELIP/HLIP family protein [Halothece sp. PCC 7418]
gi|428691212|gb|AFZ44506.1| putative CAB/ELIP/HLIP family protein [Halothece sp. PCC 7418]
Length = 54
Score = 41.2 bits (95), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 25/39 (64%)
Query: 98 FGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNL 136
FGF K E GR AMIGF A LL E +GKG+LA L L
Sbjct: 15 FGFNKYAERLNGRAAMIGFIALLLIEFFSGKGLLAWLGL 53
>gi|158337700|ref|YP_001518876.1| high light inducible protein [Acaryochloris marina MBIC11017]
gi|158307941|gb|ABW29558.1| high light inducible protein [Acaryochloris marina MBIC11017]
Length = 49
Score = 41.2 bits (95), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 27/36 (75%)
Query: 99 GFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQL 134
GF+ +E + GR+AMIGF +++ E +TGKGIL QL
Sbjct: 8 GFSAFSETWNGRLAMIGFTLAIITEALTGKGILGQL 43
>gi|359463665|ref|ZP_09252228.1| hypothetical protein ACCM5_33419 [Acaryochloris sp. CCMEE 5410]
Length = 50
Score = 41.2 bits (95), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 27/36 (75%)
Query: 99 GFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQL 134
GF+ +E + GR+AMIGF +L+ E +TGKGI+ QL
Sbjct: 9 GFSAFSETWNGRLAMIGFTLALITEALTGKGIIGQL 44
>gi|428307577|ref|YP_007144402.1| CAB/ELIP/HLIP family protein [Crinalium epipsammum PCC 9333]
gi|428249112|gb|AFZ14892.1| CAB/ELIP/HLIP-related protein [Crinalium epipsammum PCC 9333]
Length = 56
Score = 41.2 bits (95), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 25/40 (62%)
Query: 98 FGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNLE 137
FGF E GR AMIGF L+ E ITGKG+L+ L L+
Sbjct: 17 FGFNDYAERLNGRAAMIGFTIMLVIEYITGKGVLSWLGLQ 56
>gi|434396857|ref|YP_007130861.1| CAB/ELIP/HLIP superfamily protein [Stanieria cyanosphaera PCC 7437]
gi|428267954|gb|AFZ33895.1| CAB/ELIP/HLIP superfamily protein [Stanieria cyanosphaera PCC 7437]
Length = 47
Score = 41.2 bits (95), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 28/39 (71%)
Query: 98 FGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNL 136
FGFT E + GR+AM+GF ++ E +TGKGILAQL L
Sbjct: 8 FGFTSFAENWNGRLAMLGFIITIATELMTGKGILAQLGL 46
>gi|422302775|ref|ZP_16390134.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9806]
gi|440752193|ref|ZP_20931396.1| CAB/ELIP/HLIP family protein [Microcystis aeruginosa TAIHU98]
gi|389787931|emb|CCI16778.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9806]
gi|440176686|gb|ELP55959.1| CAB/ELIP/HLIP family protein [Microcystis aeruginosa TAIHU98]
Length = 70
Score = 40.8 bits (94), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 28/41 (68%)
Query: 94 TSGGFGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQL 134
+S GFTK+ E GR+AMIGF + L E +TGKGI+A +
Sbjct: 27 SSSSLGFTKKAEKLNGRLAMIGFVSLLAIELLTGKGIIAWI 67
>gi|332707224|ref|ZP_08427277.1| hypothetical protein LYNGBM3L_34220 [Moorea producens 3L]
gi|332353958|gb|EGJ33445.1| hypothetical protein LYNGBM3L_34220 [Moorea producens 3L]
Length = 50
Score = 40.8 bits (94), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 28/39 (71%)
Query: 98 FGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNL 136
FGFT + E GR+AMIGF A+L+ E ITG+G+L L L
Sbjct: 11 FGFTPKAENLNGRLAMIGFIAALVTEYITGQGVLHFLGL 49
>gi|428781289|ref|YP_007173075.1| Chlorophyll A-B binding protein [Dactylococcopsis salina PCC 8305]
gi|428695568|gb|AFZ51718.1| Chlorophyll A-B binding protein [Dactylococcopsis salina PCC 8305]
Length = 56
Score = 40.8 bits (94), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 25/39 (64%)
Query: 98 FGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNL 136
FGF K E GR AMIGF + LL E TGKG+L+ L L
Sbjct: 17 FGFNKYAERLNGRAAMIGFVSLLLVEFFTGKGMLSWLGL 55
>gi|145347781|ref|XP_001418340.1| Photosystem II protein [Ostreococcus lucimarinus CCE9901]
gi|144578569|gb|ABO96633.1| Photosystem II protein [Ostreococcus lucimarinus CCE9901]
Length = 223
Score = 40.8 bits (94), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Query: 102 KQNELFVGRVAMIGFAASLLGEGITGK-GILAQLNLETGIPIYEAEPLLLFFI 153
K ELF GR+AM+G A + +G+ TG G L Q+ LE+GIPI + E L F+
Sbjct: 147 KPYELFNGRLAMLGTAFAFVGDVETGGLGPLEQVQLESGIPIIDEEIFALVFL 199
>gi|307152335|ref|YP_003887719.1| HLIP; single helix LHC light protein [Cyanothece sp. PCC 7822]
gi|306982563|gb|ADN14444.1| HLIP; single helix LHC light protein [Cyanothece sp. PCC 7822]
Length = 59
Score = 40.8 bits (94), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 12/71 (16%)
Query: 67 LFKSKTKAPPKTKKVESKPKVEDGIFGTSGGFGFTKQNELFVGRVAMIGFAASLLGEGIT 126
+ + P +T K+E +PK FGF + E GR AMIGF +L+ E +T
Sbjct: 1 MMSETQQQPSQTPKLE-EPK-----------FGFNEYAERLNGRAAMIGFVLTLVIEYVT 48
Query: 127 GKGILAQLNLE 137
G+G+L+ L L+
Sbjct: 49 GQGLLSWLGLQ 59
>gi|254416019|ref|ZP_05029775.1| hypothetical protein MC7420_8294 [Coleofasciculus chthonoplastes
PCC 7420]
gi|196177194|gb|EDX72202.1| hypothetical protein MC7420_8294 [Coleofasciculus chthonoplastes
PCC 7420]
Length = 50
Score = 40.8 bits (94), Expect = 0.57, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 26/34 (76%)
Query: 98 FGFTKQNELFVGRVAMIGFAASLLGEGITGKGIL 131
FGFT E + GR+AMIGF A+L+ E ++G+G+L
Sbjct: 11 FGFTANAENWNGRLAMIGFVAALITEYVSGQGVL 44
>gi|425437939|ref|ZP_18818351.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9432]
gi|425451888|ref|ZP_18831707.1| conserved hypothetical protein [Microcystis aeruginosa PCC 7941]
gi|443661750|ref|ZP_21132778.1| CAB/ELIP/HLIP superfamily protein [Microcystis aeruginosa
DIANCHI905]
gi|159029709|emb|CAO87787.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
gi|389676939|emb|CCH94070.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9432]
gi|389766584|emb|CCI07833.1| conserved hypothetical protein [Microcystis aeruginosa PCC 7941]
gi|443332236|gb|ELS46855.1| CAB/ELIP/HLIP superfamily protein [Microcystis aeruginosa
DIANCHI905]
Length = 70
Score = 40.8 bits (94), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 28/41 (68%)
Query: 94 TSGGFGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQL 134
+S GFTK+ E GR+AMIGF + L E +TGKGI+A +
Sbjct: 27 SSSSLGFTKKAEKLNGRLAMIGFVSLLAIELLTGKGIVAWI 67
>gi|303285790|ref|XP_003062185.1| photosystem II PsbS protein [Micromonas pusilla CCMP1545]
gi|226456596|gb|EEH53897.1| photosystem II PsbS protein [Micromonas pusilla CCMP1545]
Length = 211
Score = 40.8 bits (94), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Query: 102 KQNELFVGRVAMIGFAASLLGEGITG-KGILAQLNLETGIPIYEAEPLLLFFIL 154
+ E+F GR+AM+G ++ G+ +TG G L QL ETG+P+ E E FF+
Sbjct: 133 RPYEVFNGRLAMLGITFAIAGDKVTGGMGPLEQLRGETGVPVIEVELFAAFFLF 186
>gi|254422560|ref|ZP_05036278.1| hypothetical protein S7335_2712 [Synechococcus sp. PCC 7335]
gi|196190049|gb|EDX85013.1| hypothetical protein S7335_2712 [Synechococcus sp. PCC 7335]
Length = 52
Score = 40.8 bits (94), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 28/39 (71%)
Query: 98 FGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNL 136
GFT+ E + GR+AMIGF +++ E TGKGIL+QL L
Sbjct: 13 LGFTEFAETWNGRLAMIGFVSAIAVEFATGKGILSQLGL 51
>gi|242055463|ref|XP_002456877.1| hypothetical protein SORBIDRAFT_03g044430 [Sorghum bicolor]
gi|241928852|gb|EES01997.1| hypothetical protein SORBIDRAFT_03g044430 [Sorghum bicolor]
Length = 231
Score = 40.4 bits (93), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 26/36 (72%)
Query: 96 GGFGFTKQNELFVGRVAMIGFAASLLGEGITGKGIL 131
GGFGFT +NEL G+ A+IGF + E +TGKG+L
Sbjct: 179 GGFGFTSENELINGKAAIIGFLLLIDFELLTGKGLL 214
>gi|86609448|ref|YP_478210.1| CAB/ELIP/HLIP family protein [Synechococcus sp. JA-2-3B'a(2-13)]
gi|86557990|gb|ABD02947.1| CAB/ELIP/HLIP family protein [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 122
Score = 40.4 bits (93), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 8/75 (10%)
Query: 64 TVALFKSKTKAPPKTKKVESKPKV-----EDGIFGTSGGFGFTKQNELFVGRVAMIGFAA 118
++A F SK P + S+P+ +DG G+T++ E + GR+AM+GFA
Sbjct: 46 SMAFFNSKR---PAGWESASRPRYVPQYGQDGDTPPEWEIGWTEKAERWNGRLAMLGFAI 102
Query: 119 SLLGEGITGKGILAQ 133
S++ E I G + A
Sbjct: 103 SVVVEAIVGHSVFAS 117
>gi|56751279|ref|YP_171980.1| high light inducible polypeptide HliC [Synechococcus elongatus PCC
6301]
gi|81299054|ref|YP_399262.1| high light inducible polypeptide HliC [Synechococcus elongatus PCC
7942]
gi|56686238|dbj|BAD79460.1| possible high light inducible polypeptide HliC [Synechococcus
elongatus PCC 6301]
gi|81167935|gb|ABB56275.1| possible high light inducible polypeptide HliC [Synechococcus
elongatus PCC 7942]
Length = 47
Score = 40.4 bits (93), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 27/39 (69%)
Query: 98 FGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNL 136
FGFT E + GR+AMIGF L E +TG+GIL+Q+ L
Sbjct: 8 FGFTAFAETWNGRLAMIGFVVGLATELLTGQGILSQIGL 46
>gi|425459449|ref|ZP_18838935.1| Genome sequencing data, contig C311 [Microcystis aeruginosa PCC
9808]
gi|389822803|emb|CCI29452.1| Genome sequencing data, contig C311 [Microcystis aeruginosa PCC
9808]
Length = 56
Score = 40.4 bits (93), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 35/63 (55%), Gaps = 12/63 (19%)
Query: 75 PPKTKKVESKPKVEDGIFGTSGGFGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQL 134
P +T K+E+ PK FGF E GR AMIGF +LL E +TG+G+L+ L
Sbjct: 6 PTQTPKLEN-PK-----------FGFNDYAERLNGRAAMIGFVITLLIEYLTGQGLLSWL 53
Query: 135 NLE 137
L+
Sbjct: 54 GLQ 56
>gi|158334760|ref|YP_001515932.1| high light inducible protein [Acaryochloris marina MBIC11017]
gi|158305001|gb|ABW26618.1| high light inducible protein [Acaryochloris marina MBIC11017]
Length = 52
Score = 40.4 bits (93), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 25/37 (67%)
Query: 98 FGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQL 134
+GF E F GR+AM GF +L+ E +TGKGIL QL
Sbjct: 8 WGFNSFAETFSGRLAMWGFFVALVTEALTGKGILGQL 44
>gi|427729925|ref|YP_007076162.1| Chlorophyll A-B binding protein [Nostoc sp. PCC 7524]
gi|427365844|gb|AFY48565.1| Chlorophyll A-B binding protein [Nostoc sp. PCC 7524]
Length = 59
Score = 40.4 bits (93), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 35/54 (64%), Gaps = 4/54 (7%)
Query: 78 TKKVESKPKVEDGIFGTSGGFGFTKQNELFVGRVAMIGFAASLLGEGITGKGIL 131
T K+ + P +ED + +GFT Q E++ GR+AMIGF A++L E +G+G L
Sbjct: 4 TTKI-TAPVIEDR---NAWRWGFTPQAEIWNGRLAMIGFLAAVLIELFSGQGFL 53
>gi|30468136|ref|NP_849023.1| ELIP-like protein [Cyanidioschyzon merolae strain 10D]
gi|30409236|dbj|BAC76185.1| ELIP-like protein (chloroplast) [Cyanidioschyzon merolae strain
10D]
Length = 43
Score = 40.4 bits (93), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 24/34 (70%)
Query: 98 FGFTKQNELFVGRVAMIGFAASLLGEGITGKGIL 131
GF E+ GR+AM+GF A+LL E +TGKG+L
Sbjct: 4 LGFNNNAEMLNGRLAMLGFVAALLTEALTGKGVL 37
>gi|218245542|ref|YP_002370913.1| CAB/ELIP/HLIP-like protein [Cyanothece sp. PCC 8801]
gi|257058579|ref|YP_003136467.1| HLIP; single helix LHC light protein [Cyanothece sp. PCC 8802]
gi|218166020|gb|ACK64757.1| CAB/ELIP/HLIP-related protein [Cyanothece sp. PCC 8801]
gi|256588745|gb|ACU99631.1| HLIP; single helix LHC light protein [Cyanothece sp. PCC 8802]
Length = 58
Score = 40.4 bits (93), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 7/64 (10%)
Query: 74 APPKTKKVESKPKVEDGIFGTSGGFGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQ 133
A +++ ES PK+ED FGF E GR AM+GF +L+ E +TG+G+L+
Sbjct: 2 ADSQSQPTES-PKLEDP------KFGFNDYAERLNGRAAMVGFVLTLVIEYLTGQGLLSW 54
Query: 134 LNLE 137
L L
Sbjct: 55 LGLH 58
>gi|218440956|ref|YP_002379285.1| CAB/ELIP/HLIP superfamily protein [Cyanothece sp. PCC 7424]
gi|218173684|gb|ACK72417.1| CAB/ELIP/HLIP superfamily protein [Cyanothece sp. PCC 7424]
Length = 47
Score = 40.4 bits (93), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 27/39 (69%)
Query: 98 FGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNL 136
FGFT E + GR+AM+GF + E +TGKGILAQL L
Sbjct: 8 FGFTSFAENWNGRLAMLGFVIGIATELLTGKGILAQLGL 46
>gi|428218333|ref|YP_007102798.1| putative CAB/ELIP/HLIP family protein [Pseudanabaena sp. PCC 7367]
gi|427990115|gb|AFY70370.1| putative CAB/ELIP/HLIP family protein [Pseudanabaena sp. PCC 7367]
Length = 49
Score = 40.4 bits (93), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 28/40 (70%)
Query: 98 FGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNLE 137
FGF + E++ GR+AM+GF L E ITG GIL+Q+ L+
Sbjct: 10 FGFNEFAEVWNGRLAMLGFVIGLATEYITGSGILSQIGLQ 49
>gi|119490866|ref|ZP_01623149.1| possible high light inducible polypeptide HliC [Lyngbya sp. PCC
8106]
gi|119453684|gb|EAW34843.1| possible high light inducible polypeptide HliC [Lyngbya sp. PCC
8106]
Length = 71
Score = 40.4 bits (93), Expect = 0.68, Method: Composition-based stats.
Identities = 19/39 (48%), Positives = 28/39 (71%)
Query: 98 FGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNL 136
FGFT+ E + GR+AM+GF L E +TG+GIL+Q+ +
Sbjct: 32 FGFTEFAETWNGRLAMLGFVIGLATEYLTGQGILSQIGI 70
>gi|166368684|ref|YP_001660957.1| CAB/ELIP/HLIP superfamily protein [Microcystis aeruginosa NIES-843]
gi|390440949|ref|ZP_10229138.1| CAB/ELIP/HLIP superfamily protein [Microcystis sp. T1-4]
gi|425438595|ref|ZP_18818939.1| CAB/ELIP/HLIP superfamily protein [Microcystis aeruginosa PCC 9717]
gi|425465240|ref|ZP_18844550.1| CAB/ELIP/HLIP superfamily protein [Microcystis aeruginosa PCC 9809]
gi|166091057|dbj|BAG05765.1| CAB/ELIP/HLIP superfamily protein [Microcystis aeruginosa NIES-843]
gi|389720503|emb|CCH95815.1| CAB/ELIP/HLIP superfamily protein [Microcystis aeruginosa PCC 9717]
gi|389832549|emb|CCI23725.1| CAB/ELIP/HLIP superfamily protein [Microcystis aeruginosa PCC 9809]
gi|389835719|emb|CCI33264.1| CAB/ELIP/HLIP superfamily protein [Microcystis sp. T1-4]
Length = 70
Score = 40.4 bits (93), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 27/41 (65%)
Query: 94 TSGGFGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQL 134
+S GFTK E GR+AMIGF + L E +TGKGI+A +
Sbjct: 27 SSSSLGFTKNAEKLNGRLAMIGFVSLLAIELLTGKGIIAWI 67
>gi|427417736|ref|ZP_18907919.1| Chlorophyll A-B binding protein [Leptolyngbya sp. PCC 7375]
gi|425760449|gb|EKV01302.1| Chlorophyll A-B binding protein [Leptolyngbya sp. PCC 7375]
Length = 47
Score = 40.4 bits (93), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 28/39 (71%)
Query: 98 FGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNL 136
FGFT+ E + GR+AM+GF L E +TG+GIL+QL L
Sbjct: 8 FGFTQLAENWNGRLAMLGFVIGLATELMTGQGILSQLGL 46
>gi|428203219|ref|YP_007081808.1| Chlorophyll A-B binding protein [Pleurocapsa sp. PCC 7327]
gi|427980651|gb|AFY78251.1| Chlorophyll A-B binding protein [Pleurocapsa sp. PCC 7327]
Length = 47
Score = 40.4 bits (93), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 28/39 (71%)
Query: 98 FGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNL 136
FGFT E + GR+AM+GF +L E +TG+GIL+QL L
Sbjct: 8 FGFTAFAESWNGRLAMLGFTIGVLTELLTGQGILSQLGL 46
>gi|302794153|ref|XP_002978841.1| hypothetical protein SELMODRAFT_449459 [Selaginella moellendorffii]
gi|300153650|gb|EFJ20288.1| hypothetical protein SELMODRAFT_449459 [Selaginella moellendorffii]
Length = 283
Score = 40.4 bits (93), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 25/34 (73%)
Query: 98 FGFTKQNELFVGRVAMIGFAASLLGEGITGKGIL 131
FGFT +NE+ GR AM+GF+ L+ E +TGKG L
Sbjct: 236 FGFTPENEITNGRAAMMGFSVLLVFELVTGKGFL 269
>gi|434393237|ref|YP_007128184.1| high light inducible protein [Gloeocapsa sp. PCC 7428]
gi|428265078|gb|AFZ31024.1| high light inducible protein [Gloeocapsa sp. PCC 7428]
Length = 59
Score = 40.4 bits (93), Expect = 0.77, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 26/34 (76%)
Query: 98 FGFTKQNELFVGRVAMIGFAASLLGEGITGKGIL 131
+GFT Q E++ GR+AMIGF A++L E +G+G L
Sbjct: 20 YGFTPQAEIWNGRLAMIGFLAAVLIELFSGQGFL 53
>gi|75907633|ref|YP_321929.1| high light inducible protein [Anabaena variabilis ATCC 29413]
gi|75701358|gb|ABA21034.1| CAB/ELIP/HLIP superfamily of protein [Anabaena variabilis ATCC
29413]
Length = 59
Score = 40.4 bits (93), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 34/54 (62%), Gaps = 4/54 (7%)
Query: 78 TKKVESKPKVEDGIFGTSGGFGFTKQNELFVGRVAMIGFAASLLGEGITGKGIL 131
T K+ S VED S +GFT Q E++ GR+AMIGF A++L E +G+G L
Sbjct: 4 TTKI-SASVVEDR---NSWRWGFTPQAEIWNGRLAMIGFLAAILIELFSGQGFL 53
>gi|414878920|tpg|DAA56051.1| TPA: hypothetical protein ZEAMMB73_342569 [Zea mays]
Length = 370
Score = 40.0 bits (92), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 25/36 (69%)
Query: 96 GGFGFTKQNELFVGRVAMIGFAASLLGEGITGKGIL 131
GGFGFT NEL G+ A+IGF + E +TGKG+L
Sbjct: 318 GGFGFTSDNELINGKAAIIGFLLLIDFELLTGKGLL 353
>gi|428220853|ref|YP_007105023.1| Chlorophyll A-B binding protein [Synechococcus sp. PCC 7502]
gi|427994193|gb|AFY72888.1| Chlorophyll A-B binding protein [Synechococcus sp. PCC 7502]
Length = 72
Score = 40.0 bits (92), Expect = 0.87, Method: Composition-based stats.
Identities = 19/34 (55%), Positives = 25/34 (73%)
Query: 98 FGFTKQNELFVGRVAMIGFAASLLGEGITGKGIL 131
FGFT E + GR+AMIGF A++ E ITG+G+L
Sbjct: 33 FGFTNGAENWNGRLAMIGFVAAIAVELITGQGVL 66
>gi|359463199|ref|ZP_09251762.1| high intensity light-inducible lhc-like protein [Acaryochloris sp.
CCMEE 5410]
Length = 47
Score = 40.0 bits (92), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 26/37 (70%)
Query: 98 FGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQL 134
FGFT+ E + GR+AM+GF S++ E +TG G+ QL
Sbjct: 8 FGFTQFAETWSGRLAMMGFTISIIAELVTGHGLYNQL 44
>gi|326489352|dbj|BAK01659.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326500040|dbj|BAJ90855.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 276
Score = 40.0 bits (92), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 7/87 (8%)
Query: 48 ESLTAAAASSSSKAFSTVALFKSKTKAPPKTKKV---ESKPKVEDGIFGTSGGFGFTKQN 104
E++ + +SS S LF K + V E + V++G+ GGFGFT N
Sbjct: 176 ENIYISIRGASSSGGSAEILFSGKAQPGSTASDVNIEEVRMVVDEGV----GGFGFTAYN 231
Query: 105 ELFVGRVAMIGFAASLLGEGITGKGIL 131
EL G+ A+IGF + E +TGKG+L
Sbjct: 232 ELVNGKAAIIGFLLLIDFELLTGKGLL 258
>gi|354568612|ref|ZP_08987775.1| high light inducible protein [Fischerella sp. JSC-11]
gi|353539866|gb|EHC09346.1| high light inducible protein [Fischerella sp. JSC-11]
Length = 60
Score = 40.0 bits (92), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 27/37 (72%)
Query: 95 SGGFGFTKQNELFVGRVAMIGFAASLLGEGITGKGIL 131
S +GFT Q EL+ GR+AMIGF +++L E +G+G L
Sbjct: 18 SWLWGFTPQTELWNGRLAMIGFISAVLIEMFSGQGFL 54
>gi|443314761|ref|ZP_21044295.1| Chlorophyll A-B binding protein [Leptolyngbya sp. PCC 6406]
gi|442785638|gb|ELR95444.1| Chlorophyll A-B binding protein [Leptolyngbya sp. PCC 6406]
Length = 47
Score = 39.7 bits (91), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 28/39 (71%)
Query: 98 FGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNL 136
FGFT+ E + GR+AM+GF L E +TG+GIL+QL L
Sbjct: 8 FGFTQFAENWNGRLAMLGFTIGLATELLTGQGILSQLGL 46
>gi|158333415|ref|YP_001514587.1| high light inducible protein [Acaryochloris marina MBIC11017]
gi|359460387|ref|ZP_09248950.1| high light inducible protein [Acaryochloris sp. CCMEE 5410]
gi|158303656|gb|ABW25273.1| high light inducible protein [Acaryochloris marina MBIC11017]
Length = 54
Score = 39.7 bits (91), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 26/39 (66%)
Query: 98 FGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNL 136
FGF + E F GR AMI F A+L+ E +TG+GI + L L
Sbjct: 15 FGFNEFAERFGGRAAMIAFIAALVFEAVTGQGIFSYLGL 53
>gi|359458357|ref|ZP_09246920.1| high light inducible protein [Acaryochloris sp. CCMEE 5410]
Length = 49
Score = 39.7 bits (91), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 27/36 (75%)
Query: 99 GFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQL 134
GF+ +E + GR+AMIGF +++ E +TG+GIL QL
Sbjct: 8 GFSAFSETWNGRLAMIGFTLAIITEALTGQGILGQL 43
>gi|115484891|ref|NP_001067589.1| Os11g0242400 [Oryza sativa Japonica Group]
gi|62733863|gb|AAX95972.1| Rieske [2Fe-2S] domain, putative [Oryza sativa Japonica Group]
gi|62733864|gb|AAX95973.1| Rieske [2Fe-2S] domain, putative [Oryza sativa Japonica Group]
gi|62733865|gb|AAX95974.1| Rieske [2Fe-2S] domain, putative [Oryza sativa Japonica Group]
gi|77549535|gb|ABA92332.1| Rieske domain containing protein, expressed [Oryza sativa Japonica
Group]
gi|77549536|gb|ABA92333.1| Rieske domain containing protein, expressed [Oryza sativa Japonica
Group]
gi|77549537|gb|ABA92334.1| Rieske domain containing protein, expressed [Oryza sativa Japonica
Group]
gi|113644811|dbj|BAF27952.1| Os11g0242400 [Oryza sativa Japonica Group]
gi|125533933|gb|EAY80481.1| hypothetical protein OsI_35659 [Oryza sativa Indica Group]
gi|125576731|gb|EAZ17953.1| hypothetical protein OsJ_33497 [Oryza sativa Japonica Group]
gi|215695042|dbj|BAG90233.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 277
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 26/36 (72%)
Query: 96 GGFGFTKQNELFVGRVAMIGFAASLLGEGITGKGIL 131
GGFGFT +NEL G+ A+IGF + E +TGKG+L
Sbjct: 224 GGFGFTNKNELINGKAAIIGFLLLIDFELLTGKGLL 259
>gi|186681508|ref|YP_001864704.1| high light inducible protein [Nostoc punctiforme PCC 73102]
gi|186463960|gb|ACC79761.1| CAB/ELIP/HLIP superfamily [Nostoc punctiforme PCC 73102]
Length = 59
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 27/34 (79%)
Query: 98 FGFTKQNELFVGRVAMIGFAASLLGEGITGKGIL 131
FGFT Q+E + GR+AMIGF +++L E +G+G+L
Sbjct: 20 FGFTPQSENWNGRLAMIGFLSAILIEAFSGQGLL 53
>gi|148241619|ref|YP_001226776.1| high light inducible protein [Synechococcus sp. RCC307]
gi|147849929|emb|CAK27423.1| High light inducible protein [Synechococcus sp. RCC307]
Length = 77
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 84 KPKVEDGIFGTSGGFGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNL 136
+PK+E G+GF ++ E GR+AM+GF A+L E +TG+G+L + L
Sbjct: 27 EPKME--YAAADAGWGFHERAEKLNGRLAMVGFVAALATELLTGEGLLHTIGL 77
>gi|354567211|ref|ZP_08986381.1| high light inducible protein [Fischerella sp. JSC-11]
gi|353543512|gb|EHC12970.1| high light inducible protein [Fischerella sp. JSC-11]
Length = 59
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 34/54 (62%), Gaps = 4/54 (7%)
Query: 78 TKKVESKPKVEDGIFGTSGGFGFTKQNELFVGRVAMIGFAASLLGEGITGKGIL 131
T K+ + P +ED S +GFT Q E++ GR+AMIGF A+ L E +G+G L
Sbjct: 4 TTKI-TAPVMEDR---NSWRWGFTPQAEIWNGRLAMIGFLAAALIELFSGQGFL 53
>gi|428203575|ref|YP_007082164.1| Chlorophyll A-B binding protein [Pleurocapsa sp. PCC 7327]
gi|427981007|gb|AFY78607.1| Chlorophyll A-B binding protein [Pleurocapsa sp. PCC 7327]
Length = 50
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 27/34 (79%)
Query: 98 FGFTKQNELFVGRVAMIGFAASLLGEGITGKGIL 131
FGFT E + GR+AMIGFAA+L+ E ++GKG+L
Sbjct: 11 FGFTPGAENWNGRLAMIGFAAALIIELVSGKGVL 44
>gi|302787777|ref|XP_002975658.1| hypothetical protein SELMODRAFT_449457 [Selaginella moellendorffii]
gi|300156659|gb|EFJ23287.1| hypothetical protein SELMODRAFT_449457 [Selaginella moellendorffii]
Length = 283
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 25/34 (73%)
Query: 98 FGFTKQNELFVGRVAMIGFAASLLGEGITGKGIL 131
FGFT +NE+ GR AM+GF+ L+ E +TGKG L
Sbjct: 236 FGFTPENEITNGRAAMMGFSLLLVFELVTGKGFL 269
>gi|220908116|ref|YP_002483427.1| CAB/ELIP/HLIP-like protein [Cyanothece sp. PCC 7425]
gi|219864727|gb|ACL45066.1| CAB/ELIP/HLIP-related protein [Cyanothece sp. PCC 7425]
Length = 54
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 25/39 (64%)
Query: 98 FGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNL 136
FGF E GR AMIGF +LL E +TG+GIL+ L L
Sbjct: 15 FGFNSFAERLNGRAAMIGFTLALLIEYVTGQGILSWLGL 53
>gi|194696446|gb|ACF82307.1| unknown [Zea mays]
Length = 276
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 25/36 (69%)
Query: 96 GGFGFTKQNELFVGRVAMIGFAASLLGEGITGKGIL 131
GGFGFT NEL G+ A+IGF + E +TGKG+L
Sbjct: 224 GGFGFTSDNELINGKAAIIGFLLLIDFELLTGKGLL 259
>gi|334117894|ref|ZP_08491985.1| CAB/ELIP/HLIP-related protein [Microcoleus vaginatus FGP-2]
gi|333461003|gb|EGK89611.1| CAB/ELIP/HLIP-related protein [Microcoleus vaginatus FGP-2]
Length = 67
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 26/40 (65%)
Query: 98 FGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNLE 137
FGF E GR AMIGF+ +L+ E +TG+G+L+ L L
Sbjct: 28 FGFNSYAERLNGRAAMIGFSLTLIIEYVTGQGLLSWLGLN 67
>gi|428224647|ref|YP_007108744.1| CAB/ELIP/HLIP family protein [Geitlerinema sp. PCC 7407]
gi|427984548|gb|AFY65692.1| CAB/ELIP/HLIP-related protein [Geitlerinema sp. PCC 7407]
Length = 56
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 32/54 (59%), Gaps = 6/54 (11%)
Query: 83 SKPKVEDGIFGTSGGFGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNL 136
+ PK ED FGF++ E GR AMIGF +L+ E ++G+G+L+ L L
Sbjct: 8 TTPKFEDP------KFGFSEYAERLNGRAAMIGFVLTLIIEYVSGQGLLSWLGL 55
>gi|226495849|ref|NP_001151666.1| rieske domain containing protein [Zea mays]
gi|195648532|gb|ACG43734.1| rieske domain containing protein [Zea mays]
Length = 276
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 25/36 (69%)
Query: 96 GGFGFTKQNELFVGRVAMIGFAASLLGEGITGKGIL 131
GGFGFT NEL G+ A+IGF + E +TGKG+L
Sbjct: 224 GGFGFTSDNELINGKAAIIGFLLLIDFELLTGKGLL 259
>gi|428315366|ref|YP_007113248.1| CAB/ELIP/HLIP-related protein [Oscillatoria nigro-viridis PCC 7112]
gi|428239046|gb|AFZ04832.1| CAB/ELIP/HLIP-related protein [Oscillatoria nigro-viridis PCC 7112]
Length = 67
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 26/39 (66%)
Query: 98 FGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNL 136
FGF E GR AMIGF+ +L+ E +TG+G+L+ L L
Sbjct: 28 FGFNSYAERLNGRAAMIGFSLTLIIEYVTGQGLLSWLGL 66
>gi|427418161|ref|ZP_18908344.1| Chlorophyll A-B binding protein [Leptolyngbya sp. PCC 7375]
gi|425760874|gb|EKV01727.1| Chlorophyll A-B binding protein [Leptolyngbya sp. PCC 7375]
Length = 47
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 28/39 (71%)
Query: 98 FGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNL 136
+GFT+ E + GR+AM+GF ++ E +TGK IL+QL +
Sbjct: 8 YGFTRIAERWNGRLAMLGFTIGIMTELLTGKSILSQLGI 46
>gi|434393178|ref|YP_007128125.1| high light inducible protein [Gloeocapsa sp. PCC 7428]
gi|428265019|gb|AFZ30965.1| high light inducible protein [Gloeocapsa sp. PCC 7428]
Length = 58
Score = 39.3 bits (90), Expect = 1.4, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 26/34 (76%)
Query: 98 FGFTKQNELFVGRVAMIGFAASLLGEGITGKGIL 131
+GFT Q E++ GR+AMIGF +++L E +G+G L
Sbjct: 19 WGFTPQTEIWNGRLAMIGFLSAVLIEVFSGQGFL 52
>gi|226494987|ref|NP_001152077.1| LOC100285714 [Zea mays]
gi|195652379|gb|ACG45657.1| OHP2 [Zea mays]
Length = 185
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 23/39 (58%)
Query: 98 FGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNL 136
FGF +NE+ GR AM GFA +L E TG + QL +
Sbjct: 136 FGFVPKNEISNGRWAMFGFAVGMLTEYATGSDFVQQLKI 174
>gi|413950479|gb|AFW83128.1| OHP2 [Zea mays]
Length = 185
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 23/39 (58%)
Query: 98 FGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNL 136
FGF +NE+ GR AM GFA +L E TG + QL +
Sbjct: 136 FGFVPKNEISNGRWAMFGFAVGMLTEYATGSDFVQQLKI 174
>gi|411120541|ref|ZP_11392913.1| Chlorophyll A-B binding protein [Oscillatoriales cyanobacterium
JSC-12]
gi|410709210|gb|EKQ66725.1| Chlorophyll A-B binding protein [Oscillatoriales cyanobacterium
JSC-12]
Length = 56
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 26/39 (66%)
Query: 98 FGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNL 136
FGF + E GR AMIGFA +L E +TG+G+L+ L L
Sbjct: 17 FGFNEYAERLNGRAAMIGFALALAIEYVTGQGLLSWLGL 55
>gi|427718032|ref|YP_007066026.1| high light inducible protein [Calothrix sp. PCC 7507]
gi|427350468|gb|AFY33192.1| high light inducible protein [Calothrix sp. PCC 7507]
Length = 59
Score = 39.3 bits (90), Expect = 1.6, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 26/34 (76%)
Query: 98 FGFTKQNELFVGRVAMIGFAASLLGEGITGKGIL 131
+GFT Q E++ GR+AMIGF A+ L E ++G+G L
Sbjct: 20 WGFTPQAEVWNGRLAMIGFLAAALVEVLSGQGFL 53
>gi|443325402|ref|ZP_21054099.1| Chlorophyll A-B binding protein [Xenococcus sp. PCC 7305]
gi|442794999|gb|ELS04389.1| Chlorophyll A-B binding protein [Xenococcus sp. PCC 7305]
Length = 47
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 27/39 (69%)
Query: 98 FGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNL 136
FGFT+ E + GR+AM+GF L E +TG GIL+QL L
Sbjct: 8 FGFTQFAENWNGRLAMLGFTIGLATELMTGHGILSQLGL 46
>gi|443309376|ref|ZP_21039099.1| Chlorophyll A-B binding protein [Synechocystis sp. PCC 7509]
gi|442780573|gb|ELR90743.1| Chlorophyll A-B binding protein [Synechocystis sp. PCC 7509]
Length = 60
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
Query: 78 TKKVESKPKVEDGIFGTSGGFGFTKQNELFVGRVAMIGFAASLLGEGITGKGIL 131
T KV + P +ED + +GFT Q E++ GR+AMIGF A+ E +G+G L
Sbjct: 4 TPKVVTPPVMEDR---NAWRYGFTPQAEIWNGRLAMIGFLAAAGIELFSGQGFL 54
>gi|317969338|ref|ZP_07970728.1| putative high light inducible protein [Synechococcus sp. CB0205]
Length = 78
Score = 39.3 bits (90), Expect = 1.7, Method: Composition-based stats.
Identities = 20/44 (45%), Positives = 27/44 (61%)
Query: 102 KQNELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGIPIYEA 145
KQ E F GR+AM+G ++ EG+TG+GI Q+ L I Y A
Sbjct: 25 KQVERFNGRMAMLGIVIGIITEGLTGQGIAHQIGLGPLIDGYAA 68
>gi|16329801|ref|NP_440529.1| high light-inducible protein [Synechocystis sp. PCC 6803]
gi|383321543|ref|YP_005382396.1| high light-inducible protein [Synechocystis sp. PCC 6803 substr.
GT-I]
gi|383324713|ref|YP_005385566.1| high light-inducible protein [Synechocystis sp. PCC 6803 substr.
PCC-P]
gi|383490597|ref|YP_005408273.1| high light-inducible protein [Synechocystis sp. PCC 6803 substr.
PCC-N]
gi|384435863|ref|YP_005650587.1| high light-inducible protein [Synechocystis sp. PCC 6803]
gi|451813961|ref|YP_007450413.1| high light-inducible protein [Synechocystis sp. PCC 6803]
gi|1652286|dbj|BAA17209.1| high light-inducible protein [Synechocystis sp. PCC 6803]
gi|339272895|dbj|BAK49382.1| high light-inducible protein [Synechocystis sp. PCC 6803]
gi|359270862|dbj|BAL28381.1| high light-inducible protein [Synechocystis sp. PCC 6803 substr.
GT-I]
gi|359274033|dbj|BAL31551.1| high light-inducible protein [Synechocystis sp. PCC 6803 substr.
PCC-N]
gi|359277203|dbj|BAL34720.1| high light-inducible protein [Synechocystis sp. PCC 6803 substr.
PCC-P]
gi|407957688|dbj|BAM50928.1| high light-inducible protein [Bacillus subtilis BEST7613]
gi|451779930|gb|AGF50899.1| high light-inducible protein [Synechocystis sp. PCC 6803]
Length = 70
Score = 39.3 bits (90), Expect = 1.7, Method: Composition-based stats.
Identities = 19/37 (51%), Positives = 25/37 (67%)
Query: 99 GFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLN 135
G+TK E GR AMIGFA+ L+ E +TG G++ LN
Sbjct: 32 GWTKYAEKMNGRFAMIGFASLLIMEVVTGHGVIGWLN 68
>gi|67922854|ref|ZP_00516352.1| CAB/ELIP/HLIP-related protein [Crocosphaera watsonii WH 8501]
gi|67855278|gb|EAM50539.1| CAB/ELIP/HLIP-related protein [Crocosphaera watsonii WH 8501]
Length = 58
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 33/62 (53%), Gaps = 7/62 (11%)
Query: 76 PKTKKVESKPKVEDGIFGTSGGFGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLN 135
P T+ E+ PK+ED FGF E GR AM+GF L E TG+G+L+ L
Sbjct: 4 PSTQPTET-PKLEDP------KFGFNDYAERLNGRAAMVGFLLVLAIEYFTGQGLLSWLG 56
Query: 136 LE 137
L+
Sbjct: 57 LQ 58
>gi|359463200|ref|ZP_09251763.1| high light inducible protein [Acaryochloris sp. CCMEE 5410]
Length = 86
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 30/51 (58%), Gaps = 4/51 (7%)
Query: 81 VESKPKVEDGIFGTSGGFGFTKQNELFVGRVAMIGFAASLLGEGITGKGIL 131
VE +P E+ + FGF E F GRVAMIGF +L E +TG+GI+
Sbjct: 36 VEPQPYAEE----PNNHFGFNTFAETFSGRVAMIGFDLLVLTELLTGRGII 82
>gi|254416566|ref|ZP_05030317.1| hypothetical protein MC7420_5170 [Coleofasciculus chthonoplastes
PCC 7420]
gi|196176532|gb|EDX71545.1| hypothetical protein MC7420_5170 [Coleofasciculus chthonoplastes
PCC 7420]
Length = 63
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 27/39 (69%)
Query: 98 FGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNL 136
FGF+ Q E++ GR+AM+GF +L E +G+G+L L +
Sbjct: 24 FGFSPQAEIWNGRLAMLGFIIALFVEYFSGQGVLHTLGI 62
>gi|17232754|ref|NP_489302.1| high light inducible protein [Nostoc sp. PCC 7120]
gi|551683|gb|AAA22044.1| ORF2 [Nostoc sp. PCC 7120]
gi|17134401|dbj|BAB76961.1| CAB/ELIP/HLIP superfamily of protein [Nostoc sp. PCC 7120]
Length = 59
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 33/54 (61%), Gaps = 4/54 (7%)
Query: 78 TKKVESKPKVEDGIFGTSGGFGFTKQNELFVGRVAMIGFAASLLGEGITGKGIL 131
T K+ S VED S +GFT Q E++ GR+AMIGF A+ L E +G+G L
Sbjct: 4 TTKI-SASVVEDR---NSWRWGFTPQAEIWNGRLAMIGFLAATLIELFSGQGFL 53
>gi|440682270|ref|YP_007157065.1| high light inducible protein [Anabaena cylindrica PCC 7122]
gi|428679389|gb|AFZ58155.1| high light inducible protein [Anabaena cylindrica PCC 7122]
Length = 59
Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 33/54 (61%), Gaps = 5/54 (9%)
Query: 78 TKKVESKPKVEDGIFGTSGGFGFTKQNELFVGRVAMIGFAASLLGEGITGKGIL 131
TK + S P+ +G +GFT Q E++ GR+AMIGF ++ L E +G+G L
Sbjct: 5 TKTITSIPEDRNG-----WRWGFTPQAEIWNGRLAMIGFLSAALIEIFSGQGFL 53
>gi|67926003|ref|ZP_00519269.1| CAB/ELIP/HLIP superfamily [Crocosphaera watsonii WH 8501]
gi|416411168|ref|ZP_11688706.1| CAB/ELIP/HLIP superfamily [Crocosphaera watsonii WH 0003]
gi|67852148|gb|EAM47641.1| CAB/ELIP/HLIP superfamily [Crocosphaera watsonii WH 8501]
gi|357260342|gb|EHJ09774.1| CAB/ELIP/HLIP superfamily [Crocosphaera watsonii WH 0003]
Length = 50
Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 27/38 (71%)
Query: 94 TSGGFGFTKQNELFVGRVAMIGFAASLLGEGITGKGIL 131
G FGFT E + GR+AMIGF ++L+ E +TG+G+L
Sbjct: 7 NEGKFGFTGYAENWNGRLAMIGFVSALIVELVTGQGVL 44
>gi|359462895|ref|ZP_09251458.1| CAB/ELIP/HLIP superfamily protein [Acaryochloris sp. CCMEE 5410]
Length = 85
Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 25/37 (67%)
Query: 98 FGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQL 134
+GF + E F GRVAMIGF +L E +TGKGI+ +
Sbjct: 47 WGFNQFAETFSGRVAMIGFDLLVLTELVTGKGIIHTI 83
>gi|172038257|ref|YP_001804758.1| putative CAB/ELIP/HLIP family protein [Cyanothece sp. ATCC 51142]
gi|354554392|ref|ZP_08973697.1| Chlorophyll A-B binding protein [Cyanothece sp. ATCC 51472]
gi|171699711|gb|ACB52692.1| putative CAB/ELIP/HLIP family protein [Cyanothece sp. ATCC 51142]
gi|353554071|gb|EHC23462.1| Chlorophyll A-B binding protein [Cyanothece sp. ATCC 51472]
Length = 47
Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 27/39 (69%)
Query: 98 FGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNL 136
FGFT E + GR+AM+GF + E +TG+GIL+QL L
Sbjct: 8 FGFTTFAENWNGRLAMLGFVIGIATEYLTGQGILSQLGL 46
>gi|449466127|ref|XP_004150778.1| PREDICTED: uncharacterized protein LOC101212671 [Cucumis sativus]
gi|449506717|ref|XP_004162828.1| PREDICTED: uncharacterized LOC101212671 [Cucumis sativus]
Length = 178
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 11/67 (16%)
Query: 68 FKSKTKAPPKTKKVESKPKVEDGIFGTSGGFGFTKQNELFVGRVAMIGFAASLLGEGITG 127
++K A + +K+++K K F +Q E G AMIG A L+ EG TG
Sbjct: 110 LEAKRMAAKEMEKIKAKEK-----------FKRRRQIEAINGAWAMIGLTAGLVIEGRTG 158
Query: 128 KGILAQL 134
KGILAQL
Sbjct: 159 KGILAQL 165
>gi|170077227|ref|YP_001733865.1| CAB/ELIP/HLIP superfamily protein [Synechococcus sp. PCC 7002]
gi|169884896|gb|ACA98609.1| CAB/ELIP/HLIP superfamily protein [Synechococcus sp. PCC 7002]
Length = 70
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 32/63 (50%), Gaps = 11/63 (17%)
Query: 69 KSKTKAPPKTKKVESKPKVEDGIFGTSGGFGFTKQNELFVGRVAMIGFAASLLGEGITGK 128
K T A T V+ P+V GFT+ E F GR AMIGFA+ LL E TG
Sbjct: 15 KMNTFAVEPTVYVQENPRV-----------GFTEYAEKFNGRAAMIGFASLLLLEIFTGH 63
Query: 129 GIL 131
G++
Sbjct: 64 GVI 66
>gi|22299751|ref|NP_682998.1| CAB/ELIP/HLIP superfamily protein [Thermosynechococcus elongatus
BP-1]
gi|22295935|dbj|BAC09760.1| CAB/ELIP/HLIP superfamily protein [Thermosynechococcus elongatus
BP-1]
Length = 69
Score = 38.5 bits (88), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 25/37 (67%)
Query: 99 GFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLN 135
GFT ELF GR+AMIGF + L E ITG G++ LN
Sbjct: 31 GFTPYAELFNGRLAMIGFISLLALEVITGHGLIGFLN 67
>gi|113953147|ref|YP_732027.1| high light inducible protein [Synechococcus sp. CC9311]
gi|113880498|gb|ABI45456.1| possible high light inducible protein [Synechococcus sp. CC9311]
Length = 100
Score = 38.5 bits (88), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 35/54 (64%), Gaps = 4/54 (7%)
Query: 84 KPKVEDGIFGTS-GGFGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNL 136
+P++E + T+ G+GF + E GR+AM+GF A++ E ITG+G+L + L
Sbjct: 50 EPRME---YATADAGWGFHSRAEKLNGRLAMLGFVAAIATEMITGEGLLRTIGL 100
>gi|318040569|ref|ZP_07972525.1| Lhc-like protein Lhl4 [Synechococcus sp. CB0101]
Length = 50
Score = 38.5 bits (88), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 27/43 (62%)
Query: 94 TSGGFGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNL 136
TS FGF E + GR+AM+GF L E +TG+GIL Q+ L
Sbjct: 7 TSARFGFVNFAETWNGRLAMLGFTIGLATELLTGQGILGQIGL 49
>gi|298491610|ref|YP_003721787.1| high light inducible protein ['Nostoc azollae' 0708]
gi|298233528|gb|ADI64664.1| high light inducible protein ['Nostoc azollae' 0708]
Length = 59
Score = 38.5 bits (88), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 33/54 (61%), Gaps = 5/54 (9%)
Query: 78 TKKVESKPKVEDGIFGTSGGFGFTKQNELFVGRVAMIGFAASLLGEGITGKGIL 131
T+ + S P+ +G +GFT Q E++ GR+AMIGF A+ L E +G+G L
Sbjct: 5 TRTMTSIPEDRNG-----WRWGFTPQAEIWNGRLAMIGFLAAALIELFSGQGFL 53
>gi|428211488|ref|YP_007084632.1| Chlorophyll A-B binding protein [Oscillatoria acuminata PCC 6304]
gi|427999869|gb|AFY80712.1| Chlorophyll A-B binding protein [Oscillatoria acuminata PCC 6304]
Length = 47
Score = 38.5 bits (88), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 28/43 (65%)
Query: 94 TSGGFGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNL 136
T FGFT+ E + GR+AM+GF + E +TG GIL+Q+ L
Sbjct: 4 TKAKFGFTEFAETWNGRLAMLGFVIGVATELLTGHGILSQIGL 46
>gi|359463360|ref|ZP_09251923.1| high intensity light-inducible lhc-like protein [Acaryochloris sp.
CCMEE 5410]
Length = 47
Score = 38.5 bits (88), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 25/37 (67%)
Query: 98 FGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQL 134
FGFT+ E + GR+AM+GF S++ E ITG G+ L
Sbjct: 8 FGFTQFAETWSGRLAMMGFTLSIIAELITGHGLYNHL 44
>gi|158340909|ref|YP_001522077.1| hypothetical protein AM1_D0272 [Acaryochloris marina MBIC11017]
gi|158311150|gb|ABW32763.1| conserved domain protein [Acaryochloris marina MBIC11017]
Length = 50
Score = 38.5 bits (88), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 27/36 (75%)
Query: 99 GFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQL 134
GF+ +E + GR+AMIGF +L+ E +TG+GI+ Q+
Sbjct: 9 GFSAFSETWNGRLAMIGFTLALITEALTGEGIIGQI 44
>gi|308805584|ref|XP_003080104.1| photosystem II 22 kda polypeptide (ISS) [Ostreococcus tauri]
gi|116058563|emb|CAL53752.1| photosystem II 22 kda polypeptide (ISS) [Ostreococcus tauri]
Length = 244
Score = 38.5 bits (88), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 40/83 (48%), Gaps = 19/83 (22%)
Query: 72 TKAPPKTKKVESKPKVEDGIFGTSGGFGFTKQNELFVGRVAMIGFAASLLGEGITGK-GI 130
TK P +T E KP ELF GR+AM+G A +L+G+ TG G
Sbjct: 156 TKQPYETNVKEQKPY------------------ELFNGRLAMLGSAFALVGDVRTGGLGP 197
Query: 131 LAQLNLETGIPIYEAEPLLLFFI 153
L Q+ E GIP+ + E + F+
Sbjct: 198 LEQVQNEVGIPVIDEEIFAVIFL 220
>gi|126656545|ref|ZP_01727806.1| CAB/ELIP/HLIP family protein [Cyanothece sp. CCY0110]
gi|172037129|ref|YP_001803630.1| putative CAB/ELIP/HLIP family protein [Cyanothece sp. ATCC 51142]
gi|354555893|ref|ZP_08975192.1| putative CAB/ELIP/HLIP family protein [Cyanothece sp. ATCC 51472]
gi|126622231|gb|EAZ92938.1| CAB/ELIP/HLIP family protein [Cyanothece sp. CCY0110]
gi|171698583|gb|ACB51564.1| putative CAB/ELIP/HLIP family protein [Cyanothece sp. ATCC 51142]
gi|353552217|gb|EHC21614.1| putative CAB/ELIP/HLIP family protein [Cyanothece sp. ATCC 51472]
Length = 47
Score = 38.5 bits (88), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 28/39 (71%)
Query: 98 FGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNL 136
GFT+ E + GR+AM+GF ++ E +TG+GIL+Q+ L
Sbjct: 8 LGFTEFAEAWNGRLAMLGFVIGVITEYVTGQGILSQIGL 46
>gi|440684521|ref|YP_007159316.1| CAB/ELIP/HLIP-related protein [Anabaena cylindrica PCC 7122]
gi|428681640|gb|AFZ60406.1| CAB/ELIP/HLIP-related protein [Anabaena cylindrica PCC 7122]
Length = 56
Score = 38.5 bits (88), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 31/54 (57%), Gaps = 6/54 (11%)
Query: 84 KPKVEDGIFGTSGGFGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNLE 137
PK+ED FGF + +E GR AMIGF +L E +T +G+L+ L L+
Sbjct: 9 NPKLEDP------KFGFNEYSERLNGRAAMIGFILMVLIEYLTNQGVLSWLGLK 56
>gi|428223346|ref|YP_007107516.1| Chlorophyll A-B binding protein [Synechococcus sp. PCC 7502]
gi|427996686|gb|AFY75381.1| Chlorophyll A-B binding protein [Synechococcus sp. PCC 7502]
Length = 54
Score = 38.5 bits (88), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 24/43 (55%)
Query: 94 TSGGFGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNL 136
T FGF E GR AMIGF L+ E TGKG+LA L L
Sbjct: 11 TDPSFGFNSYAERLNGRAAMIGFLTVLVIEFATGKGVLAWLGL 53
>gi|119512307|ref|ZP_01631393.1| CAB/ELIP/HLIP superfamily protein [Nodularia spumigena CCY9414]
gi|119463020|gb|EAW43971.1| CAB/ELIP/HLIP superfamily protein [Nodularia spumigena CCY9414]
Length = 59
Score = 38.5 bits (88), Expect = 2.7, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 25/34 (73%)
Query: 98 FGFTKQNELFVGRVAMIGFAASLLGEGITGKGIL 131
+GFT Q E++ GR+AMIGF A+ L E +G+G L
Sbjct: 20 WGFTPQAEIWNGRLAMIGFLAAALIELFSGQGFL 53
>gi|443321519|ref|ZP_21050568.1| Chlorophyll A-B binding protein [Gloeocapsa sp. PCC 73106]
gi|442788779|gb|ELR98463.1| Chlorophyll A-B binding protein [Gloeocapsa sp. PCC 73106]
Length = 47
Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 27/38 (71%)
Query: 99 GFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNL 136
GFT E + GR+AM+GF +L E +TG+GIL+Q+ L
Sbjct: 9 GFTNFAETWNGRLAMLGFTIGILTELLTGQGILSQIGL 46
>gi|254412995|ref|ZP_05026767.1| hypothetical protein MC7420_2155 [Coleofasciculus chthonoplastes
PCC 7420]
gi|254413010|ref|ZP_05026782.1| hypothetical protein MC7420_2170 [Coleofasciculus chthonoplastes
PCC 7420]
gi|196180159|gb|EDX75151.1| hypothetical protein MC7420_2155 [Coleofasciculus chthonoplastes
PCC 7420]
gi|196180174|gb|EDX75166.1| hypothetical protein MC7420_2170 [Coleofasciculus chthonoplastes
PCC 7420]
Length = 47
Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 26/39 (66%)
Query: 98 FGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNL 136
FGFT E + GR+AM+GF + E +TG+GIL QL L
Sbjct: 8 FGFTSFAETWNGRLAMLGFVIGIATELLTGQGILQQLGL 46
>gi|172036458|ref|YP_001802959.1| putative CAB/ELIP/HLIP superfamily protein [Cyanothece sp. ATCC
51142]
gi|354553241|ref|ZP_08972548.1| Chlorophyll A-B binding protein [Cyanothece sp. ATCC 51472]
gi|171697912|gb|ACB50893.1| putative CAB/ELIP/HLIP superfamily protein [Cyanothece sp. ATCC
51142]
gi|353555071|gb|EHC24460.1| Chlorophyll A-B binding protein [Cyanothece sp. ATCC 51472]
Length = 50
Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 27/38 (71%)
Query: 94 TSGGFGFTKQNELFVGRVAMIGFAASLLGEGITGKGIL 131
G FGFT E + GR+AMIGF ++L+ E +TG+G+L
Sbjct: 7 NEGKFGFTGYAENWNGRLAMIGFISALIVELVTGQGVL 44
>gi|186684118|ref|YP_001867314.1| CAB/ELIP/HLIP family protein [Nostoc punctiforme PCC 73102]
gi|186466570|gb|ACC82371.1| CAB/ELIP/HLIP-related protein [Nostoc punctiforme PCC 73102]
Length = 56
Score = 38.1 bits (87), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 26/40 (65%)
Query: 98 FGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNLE 137
FGF + E GR AMIGFA L+ E +T +G+L+ L L+
Sbjct: 17 FGFNEYAERLNGRAAMIGFALMLVIEYVTNQGVLSWLGLK 56
>gi|224100707|ref|XP_002334345.1| predicted protein [Populus trichocarpa]
gi|222871289|gb|EEF08420.1| predicted protein [Populus trichocarpa]
Length = 289
Score = 38.1 bits (87), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 25/35 (71%)
Query: 97 GFGFTKQNELFVGRVAMIGFAASLLGEGITGKGIL 131
GFGFT +NEL G+ A+IGF + E +TGKG+L
Sbjct: 238 GFGFTSKNELINGQAAIIGFLFLIDFELLTGKGVL 272
>gi|113954925|ref|YP_731425.1| Lhc-like protein Lhl4 [Synechococcus sp. CC9311]
gi|113882276|gb|ABI47234.1| Lhc-like protein Lhl4 [Synechococcus sp. CC9311]
Length = 47
Score = 38.1 bits (87), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 29/43 (67%)
Query: 94 TSGGFGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNL 136
T+ FGF + E + GR+AMIGF L E +TG+GIL+Q+ L
Sbjct: 5 TASRFGFVEFAETWNGRLAMIGFVIGLGTELLTGQGILSQIGL 47
>gi|218441206|ref|YP_002379535.1| hypothetical protein PCC7424_4300 [Cyanothece sp. PCC 7424]
gi|218173934|gb|ACK72667.1| hypothetical protein PCC7424_4300 [Cyanothece sp. PCC 7424]
Length = 66
Score = 38.1 bits (87), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 71 KTKAPPKTKKVESKPKVEDGIFGTSGGFGFTKQNELFVGRVAMIGFAASLLGEGITGKGI 130
+++ P +++ K G FGT FG EL+ GR+AMIGF +L+ E TG+G
Sbjct: 2 ESRQAPDYYTEQAQRKY--GEFGTKFEFGSNPSAELWNGRLAMIGFLGALIIELTTGQGF 59
Query: 131 LAQLNL 136
L L
Sbjct: 60 FHWLGL 65
>gi|148242624|ref|YP_001227781.1| high light inducible protein [Synechococcus sp. RCC307]
gi|147850934|emb|CAK28428.1| High light inducible protein [Synechococcus sp. RCC307]
Length = 73
Score = 38.1 bits (87), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 16/26 (61%), Positives = 23/26 (88%)
Query: 109 GRVAMIGFAASLLGEGITGKGILAQL 134
GRVAM+GF+A+++GE I+G+GI QL
Sbjct: 37 GRVAMVGFSAAVVGEWISGEGITGQL 62
>gi|218439024|ref|YP_002377353.1| CAB/ELIP/HLIP-like protein [Cyanothece sp. PCC 7424]
gi|218171752|gb|ACK70485.1| CAB/ELIP/HLIP-related protein [Cyanothece sp. PCC 7424]
Length = 59
Score = 38.1 bits (87), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 26/40 (65%)
Query: 98 FGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNLE 137
FGF + E GR AMIGF +L+ E +TG+ +L+ L L+
Sbjct: 20 FGFNEYAERLNGRAAMIGFVITLVIEYVTGQSLLSWLGLQ 59
>gi|427702864|ref|YP_007046086.1| Chlorophyll A-B binding protein [Cyanobium gracile PCC 6307]
gi|427346032|gb|AFY28745.1| Chlorophyll A-B binding protein [Cyanobium gracile PCC 6307]
Length = 48
Score = 38.1 bits (87), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 26/39 (66%)
Query: 98 FGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNL 136
FGF E + GR+AM+GF L E +TG+GILAQ+ L
Sbjct: 9 FGFVNFAETWNGRLAMMGFVIGLATEILTGQGILAQVGL 47
>gi|126660148|ref|ZP_01731267.1| CAB/ELIP/HLIP superfamily protein [Cyanothece sp. CCY0110]
gi|126618591|gb|EAZ89341.1| CAB/ELIP/HLIP superfamily protein [Cyanothece sp. CCY0110]
Length = 50
Score = 38.1 bits (87), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 27/38 (71%)
Query: 94 TSGGFGFTKQNELFVGRVAMIGFAASLLGEGITGKGIL 131
G FGFT E + GR+AMIGF ++L+ E +TG+G+L
Sbjct: 7 NEGKFGFTGYAENWNGRLAMIGFLSALIVELVTGQGVL 44
>gi|282896474|ref|ZP_06304494.1| CAB/ELIP/HLIP superfamily of protein [Raphidiopsis brookii D9]
gi|281198580|gb|EFA73461.1| CAB/ELIP/HLIP superfamily of protein [Raphidiopsis brookii D9]
Length = 59
Score = 38.1 bits (87), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 32/53 (60%), Gaps = 5/53 (9%)
Query: 79 KKVESKPKVEDGIFGTSGGFGFTKQNELFVGRVAMIGFAASLLGEGITGKGIL 131
K + S P+ + + +GFT Q E++ GR+AMIGF A+ L E +G+G L
Sbjct: 6 KTISSVPEDRN-----AWRWGFTPQAEIWNGRLAMIGFVAATLIELFSGQGFL 53
>gi|119512961|ref|ZP_01632022.1| CAB/ELIP/HLIP superfamily protein [Nodularia spumigena CCY9414]
gi|119462374|gb|EAW43350.1| CAB/ELIP/HLIP superfamily protein [Nodularia spumigena CCY9414]
Length = 57
Score = 38.1 bits (87), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 24/34 (70%)
Query: 98 FGFTKQNELFVGRVAMIGFAASLLGEGITGKGIL 131
+GFT Q E + GR+AMIGF A+ L E +G+G L
Sbjct: 18 WGFTTQTEHWNGRLAMIGFVAAALIEVFSGQGFL 51
>gi|300867383|ref|ZP_07112039.1| CAB/ELIP/HLIP family protein [Oscillatoria sp. PCC 6506]
gi|300334634|emb|CBN57207.1| CAB/ELIP/HLIP family protein [Oscillatoria sp. PCC 6506]
Length = 48
Score = 38.1 bits (87), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 26/38 (68%)
Query: 99 GFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNL 136
GFT E + GR+AM+GF L E +TG+GIL+QL L
Sbjct: 10 GFTDFAETWNGRLAMLGFVIGLATEFLTGQGILSQLGL 47
>gi|148239133|ref|YP_001224520.1| high light inducible protein [Synechococcus sp. WH 7803]
gi|147847672|emb|CAK23223.1| High light inducible protein [Synechococcus sp. WH 7803]
Length = 78
Score = 38.1 bits (87), Expect = 3.2, Method: Composition-based stats.
Identities = 19/41 (46%), Positives = 26/41 (63%)
Query: 105 ELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGIPIYEA 145
E F GR AM+GF ++ EG+TG+GIL Q+ L + Y A
Sbjct: 28 ERFNGRAAMLGFVIGVITEGLTGQGILHQIGLGPLVDGYAA 68
>gi|428313436|ref|YP_007124413.1| Chlorophyll A-B binding protein [Microcoleus sp. PCC 7113]
gi|428255048|gb|AFZ21007.1| Chlorophyll A-B binding protein [Microcoleus sp. PCC 7113]
Length = 59
Score = 38.1 bits (87), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 24/33 (72%)
Query: 99 GFTKQNELFVGRVAMIGFAASLLGEGITGKGIL 131
G T Q E++ GR+AMIGF A+LL E + +G+L
Sbjct: 21 GITPQAEIWNGRLAMIGFVAALLTEILANQGVL 53
>gi|434395111|ref|YP_007130058.1| CAB/ELIP/HLIP-like protein [Gloeocapsa sp. PCC 7428]
gi|428266952|gb|AFZ32898.1| CAB/ELIP/HLIP-like protein [Gloeocapsa sp. PCC 7428]
Length = 57
Score = 38.1 bits (87), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 26/40 (65%)
Query: 98 FGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNLE 137
FGF + E GR AMIGF ++ E +TGKG+LA L L+
Sbjct: 18 FGFNEYAERLNGRAAMIGFLLLIVIEYLTGKGVLAWLGLK 57
>gi|116075175|ref|ZP_01472435.1| possible high light inducible protein [Synechococcus sp. RS9916]
gi|116067372|gb|EAU73126.1| possible high light inducible protein [Synechococcus sp. RS9916]
Length = 66
Score = 38.1 bits (87), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 22/30 (73%)
Query: 105 ELFVGRVAMIGFAASLLGEGITGKGILAQL 134
EL GRVAM+GF +L E ITG GI++QL
Sbjct: 29 ELLNGRVAMLGFVIGVLTEAITGHGIVSQL 58
>gi|428778229|ref|YP_007170016.1| CAB/ELIP/HLIP superfamily protein [Halothece sp. PCC 7418]
gi|428692508|gb|AFZ45802.1| putative CAB/ELIP/HLIP superfamily protein [Halothece sp. PCC 7418]
Length = 49
Score = 38.1 bits (87), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 25/34 (73%)
Query: 98 FGFTKQNELFVGRVAMIGFAASLLGEGITGKGIL 131
FGF E + GR+AMIGF A+LL E ++G+G+L
Sbjct: 10 FGFNTSAENWNGRLAMIGFVAALLTEILSGQGVL 43
>gi|428772124|ref|YP_007163912.1| high intensity light-inducible lhc-like protein [Cyanobacterium
stanieri PCC 7202]
gi|428686403|gb|AFZ46263.1| high intensity light-inducible lhc-like protein [Cyanobacterium
stanieri PCC 7202]
Length = 46
Score = 38.1 bits (87), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 28/41 (68%)
Query: 96 GGFGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNL 136
G GFT E + GR+AM+GF +L E +TG+GIL+QL L
Sbjct: 5 GKLGFTAFAENWNGRLAMLGFLIGILTELLTGQGILSQLGL 45
>gi|291566124|dbj|BAI88396.1| high light inducible protein [Arthrospira platensis NIES-39]
Length = 64
Score = 38.1 bits (87), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 24/39 (61%)
Query: 98 FGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNL 136
FGF +E GR AMIGF +L E TG+G+LA L L
Sbjct: 25 FGFNSYSERLNGRAAMIGFVITLAIEYFTGQGLLAWLGL 63
>gi|428769274|ref|YP_007161064.1| CAB/ELIP/HLIP superfamily protein [Cyanobacterium aponinum PCC
10605]
gi|428683553|gb|AFZ53020.1| CAB/ELIP/HLIP superfamily protein [Cyanobacterium aponinum PCC
10605]
Length = 47
Score = 37.7 bits (86), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 27/42 (64%)
Query: 95 SGGFGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNL 136
G GFT E + GR+AM+GF + E +TGKGILAQL L
Sbjct: 5 EGKLGFTAFAENWNGRLAMLGFLIGIATELMTGKGILAQLGL 46
>gi|62638123|gb|AAX92667.1| chloroplast carotene biosynthesis related protein [Dunaliella
salina]
Length = 183
Score = 37.7 bits (86), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 36/70 (51%), Gaps = 7/70 (10%)
Query: 98 FGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGIPIYEAEPLLLFFILFTL 157
GF+ E+ GR+AM+GF A+L E TG+ +L QL E + + L F+LF+
Sbjct: 82 MGFSGAPEIINGRLAMLGFVAALGAELSTGESVLTQLADEPTL-------IALTFVLFSA 134
Query: 158 LGAIGALGDR 167
+ A R
Sbjct: 135 ASLVPAFARR 144
>gi|254432487|ref|ZP_05046190.1| conserved hypothetical protein [Cyanobium sp. PCC 7001]
gi|197626940|gb|EDY39499.1| conserved hypothetical protein [Cyanobium sp. PCC 7001]
Length = 47
Score = 37.7 bits (86), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 26/39 (66%)
Query: 98 FGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNL 136
FGF E + GR+AM+GF L E +TG+GILAQ+ L
Sbjct: 8 FGFVAFAETWNGRLAMMGFVIGLATEILTGQGILAQVGL 46
>gi|209524718|ref|ZP_03273265.1| CAB/ELIP/HLIP family protein [Arthrospira maxima CS-328]
gi|376004245|ref|ZP_09781986.1| conserved hypothetical protein [Arthrospira sp. PCC 8005]
gi|409993395|ref|ZP_11276537.1| CAB/ELIP/HLIP family protein [Arthrospira platensis str. Paraca]
gi|209494862|gb|EDZ95170.1| CAB/ELIP/HLIP family protein [Arthrospira maxima CS-328]
gi|291568626|dbj|BAI90898.1| high light inducible protein [Arthrospira platensis NIES-39]
gi|375327376|emb|CCE17739.1| conserved hypothetical protein [Arthrospira sp. PCC 8005]
gi|409935721|gb|EKN77243.1| CAB/ELIP/HLIP family protein [Arthrospira platensis str. Paraca]
Length = 47
Score = 37.7 bits (86), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 28/39 (71%)
Query: 98 FGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNL 136
FGFT+ E + GR+AM+GF + E +TG+GIL+QL L
Sbjct: 8 FGFTEFAETWNGRLAMLGFVIGVGTELLTGQGILSQLGL 46
>gi|254412690|ref|ZP_05026463.1| hypothetical protein MC7420_1334 [Coleofasciculus chthonoplastes
PCC 7420]
gi|196180425|gb|EDX75416.1| hypothetical protein MC7420_1334 [Coleofasciculus chthonoplastes
PCC 7420]
Length = 62
Score = 37.7 bits (86), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 23/40 (57%)
Query: 97 GFGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNL 136
FG+T E GR AMI F A LL E ITGKG+ L L
Sbjct: 22 AFGWTPYAEQINGRFAMIAFVALLLIELITGKGLFGWLGL 61
>gi|226508068|ref|NP_001148859.1| LOC100282478 [Zea mays]
gi|195622672|gb|ACG33166.1| OHP2 [Zea mays]
gi|414881620|tpg|DAA58751.1| TPA: OHP2 [Zea mays]
Length = 189
Score = 37.7 bits (86), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 32/60 (53%), Gaps = 8/60 (13%)
Query: 77 KTKKVESKPKVEDGIFGTSGGFGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNL 136
K KK+E + + G F FGF +NE+ GR AM GFA +L E TG + Q+ +
Sbjct: 127 KKKKLE---EADQGPF-----FGFLPKNEISNGRWAMFGFAVGMLTEYATGSDFVQQMKI 178
>gi|443478182|ref|ZP_21067965.1| ferrochelatase [Pseudanabaena biceps PCC 7429]
gi|443016571|gb|ELS31205.1| ferrochelatase [Pseudanabaena biceps PCC 7429]
Length = 49
Score = 37.7 bits (86), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 26/39 (66%)
Query: 98 FGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNL 136
FGF E + GR+AM+GF L E +TG+GIL+Q+ L
Sbjct: 10 FGFNNFAETWNGRLAMLGFVIGLATELLTGQGILSQIGL 48
>gi|158334480|ref|YP_001515652.1| high light inducible protein [Acaryochloris marina MBIC11017]
gi|158304721|gb|ABW26338.1| high light inducible protein [Acaryochloris marina MBIC11017]
Length = 52
Score = 37.7 bits (86), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 25/37 (67%)
Query: 98 FGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQL 134
+GF E F GR+AM GF +L+ E +TGKGI+ QL
Sbjct: 8 WGFNSFAETFSGRLAMYGFFIALITELLTGKGIIGQL 44
>gi|148242619|ref|YP_001227776.1| high light inducible protein [Synechococcus sp. RCC307]
gi|147850929|emb|CAK28423.1| High light inducible protein [Synechococcus sp. RCC307]
Length = 80
Score = 37.7 bits (86), Expect = 4.4, Method: Composition-based stats.
Identities = 19/44 (43%), Positives = 27/44 (61%)
Query: 102 KQNELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGIPIYEA 145
K E F GR AM+GF ++ EG+TG+GI+ Q+ L + Y A
Sbjct: 27 KDVERFNGRAAMLGFVIGVITEGLTGQGIIHQIGLGPLVDGYAA 70
>gi|148239267|ref|YP_001224654.1| high light inducible protein [Synechococcus sp. WH 7803]
gi|147847806|emb|CAK23357.1| High light inducible protein [Synechococcus sp. WH 7803]
Length = 77
Score = 37.7 bits (86), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 28/40 (70%)
Query: 97 GFGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNL 136
G+GF ++ E GR+AM+GF A++ E +TG+G+L + L
Sbjct: 38 GWGFHERAERLNGRLAMLGFVAAIATELLTGEGLLQAIGL 77
>gi|113955265|ref|YP_730447.1| ferrochelatase [Synechococcus sp. CC9311]
gi|113882616|gb|ABI47574.1| Ferrochelatase [Synechococcus sp. CC9311]
Length = 56
Score = 37.7 bits (86), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 30/53 (56%)
Query: 84 KPKVEDGIFGTSGGFGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNL 136
+ D T FGF+ E + GR+AM+GF L E +TG+GIL+Q+ L
Sbjct: 4 HHSINDMTNSTQTRFGFSNFAETWNGRLAMLGFVIGLGTELLTGQGILSQIGL 56
>gi|126659669|ref|ZP_01730798.1| hypothetical protein CY0110_29084 [Cyanothece sp. CCY0110]
gi|126619014|gb|EAZ89754.1| hypothetical protein CY0110_29084 [Cyanothece sp. CCY0110]
Length = 70
Score = 37.7 bits (86), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 24/37 (64%)
Query: 98 FGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQL 134
FGF K E GR AMIGF + L EG+TG+G++ L
Sbjct: 31 FGFNKYAEKLNGRFAMIGFISLLAFEGLTGQGLVTWL 67
>gi|241865200|gb|ACS68678.1| stress enhanced protein 1 [Sonneratia alba]
gi|241865432|gb|ACS68748.1| stress enhanced protein 1 [Sonneratia alba]
Length = 78
Score = 37.7 bits (86), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 27/37 (72%)
Query: 105 ELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGIP 141
++++GR+AM+GFAA++ E TGKG+L L T +P
Sbjct: 33 DIWLGRLAMVGFAAAISVEVATGKGLLENFGLTTPLP 69
>gi|254430464|ref|ZP_05044167.1| putative high light inducible protein [Cyanobium sp. PCC 7001]
gi|197624917|gb|EDY37476.1| putative high light inducible protein [Cyanobium sp. PCC 7001]
Length = 57
Score = 37.7 bits (86), Expect = 4.8, Method: Composition-based stats.
Identities = 16/37 (43%), Positives = 26/37 (70%)
Query: 94 TSGGFGFTKQNELFVGRVAMIGFAASLLGEGITGKGI 130
+ G+GF ++ EL GR+AM+GF L+ E ++G+GI
Sbjct: 8 SESGWGFHRRAELLNGRMAMLGFVIGLMVEALSGQGI 44
>gi|11467378|ref|NP_043235.1| hypothetical protein CypaCp098 [Cyanophora paradoxa]
gi|1351742|sp|P48367.1|YCF17_CYAPA RecName: Full=Uncharacterized protein ycf17; AltName: Full=ORF48
gi|1016179|gb|AAA81266.1| similar to CAB/ELIP/HLIP superfamily of proteins [Cyanophora
paradoxa]
Length = 49
Score = 37.7 bits (86), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 25/34 (73%)
Query: 98 FGFTKQNELFVGRVAMIGFAASLLGEGITGKGIL 131
+GFT E + GR+AM+GF A+LL E +TG+G L
Sbjct: 10 WGFTSGAENWNGRLAMLGFIAALLTESLTGQGTL 43
>gi|119512048|ref|ZP_01631142.1| CAB/ELIP/HLIP superfamily protein [Nodularia spumigena CCY9414]
gi|119463274|gb|EAW44217.1| CAB/ELIP/HLIP superfamily protein [Nodularia spumigena CCY9414]
Length = 56
Score = 37.7 bits (86), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 25/34 (73%)
Query: 98 FGFTKQNELFVGRVAMIGFAASLLGEGITGKGIL 131
+GFT Q+E + GR AMIGF +++L E +G+G L
Sbjct: 17 WGFTSQSENWNGRFAMIGFVSAILLEVFSGQGFL 50
>gi|428299681|ref|YP_007137987.1| high light inducible protein [Calothrix sp. PCC 6303]
gi|428236225|gb|AFZ02015.1| high light inducible protein [Calothrix sp. PCC 6303]
Length = 59
Score = 37.7 bits (86), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 25/34 (73%)
Query: 98 FGFTKQNELFVGRVAMIGFAASLLGEGITGKGIL 131
+GFT Q E++ GR+AMIGF A+ L E +G+G L
Sbjct: 20 WGFTPQAEVWNGRLAMIGFVAAALIELFSGQGFL 53
>gi|116075467|ref|ZP_01472727.1| putative high light inducible protein [Synechococcus sp. RS9916]
gi|116067664|gb|EAU73418.1| putative high light inducible protein [Synechococcus sp. RS9916]
Length = 78
Score = 37.7 bits (86), Expect = 4.9, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 23/34 (67%)
Query: 103 QNELFVGRVAMIGFAASLLGEGITGKGILAQLNL 136
Q E F GR AM+GF +L E +TG+GI+ Q+ L
Sbjct: 26 QVERFNGRAAMLGFVIGVLTEALTGQGIIHQIGL 59
>gi|428778912|ref|YP_007170698.1| Chlorophyll A-B binding protein [Dactylococcopsis salina PCC 8305]
gi|428693191|gb|AFZ49341.1| Chlorophyll A-B binding protein [Dactylococcopsis salina PCC 8305]
Length = 49
Score = 37.4 bits (85), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 25/34 (73%)
Query: 98 FGFTKQNELFVGRVAMIGFAASLLGEGITGKGIL 131
FGF E + GR+AMIGF A+LL E ++G+G+L
Sbjct: 10 FGFNPSAENWNGRLAMIGFVAALLTEILSGQGVL 43
>gi|411120765|ref|ZP_11393137.1| Chlorophyll A-B binding protein [Oscillatoriales cyanobacterium
JSC-12]
gi|410709434|gb|EKQ66949.1| Chlorophyll A-B binding protein [Oscillatoriales cyanobacterium
JSC-12]
Length = 69
Score = 37.4 bits (85), Expect = 5.1, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 31/54 (57%), Gaps = 5/54 (9%)
Query: 81 VESKPKVEDGIFGTSGGFGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQL 134
VE K V+D + FGF + E GR+AMIGF A+L E +TG G++ L
Sbjct: 18 VEPKMYVDD-----TQKFGFNEYAEKLNGRLAMIGFVATLALEVVTGHGVIGWL 66
>gi|354547270|emb|CCE44004.1| hypothetical protein CPAR2_502290 [Candida parapsilosis]
Length = 1194
Score = 37.4 bits (85), Expect = 5.2, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Query: 23 SLVTFQTQMLRPKPFSHLMFNPLSNESLTAAAASSSSKAFSTVALFKSKTKAPPKTKKVE 82
S V QT + P P S F SN S T+ +SS+ F T L K PKT+K +
Sbjct: 400 STVHNQTAAITPVPPSATKFPSYSNASTTSTLVNSSNGTFPTTNLSMGLNKQSPKTEKKK 459
Query: 83 SKPK-VEDGIFGTS 95
+K + V +FG S
Sbjct: 460 NKMREVFSSMFGKS 473
>gi|86608000|ref|YP_476762.1| CAB/ELIP/HLIP family protein [Synechococcus sp. JA-2-3B'a(2-13)]
gi|86556542|gb|ABD01499.1| CAB/ELIP/HLIP family protein [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 56
Score = 37.4 bits (85), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 27/39 (69%)
Query: 98 FGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNL 136
FGFT E + GR+AM+GF + E +TG+GIL+Q+ L
Sbjct: 17 FGFTTFAEKWNGRLAMLGFVIGVATELLTGQGILSQIGL 55
>gi|357157039|ref|XP_003577663.1| PREDICTED: uncharacterized protein LOC100824335 [Brachypodium
distachyon]
Length = 276
Score = 37.4 bits (85), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 31/50 (62%), Gaps = 4/50 (8%)
Query: 82 ESKPKVEDGIFGTSGGFGFTKQNELFVGRVAMIGFAASLLGEGITGKGIL 131
E + V++G+ GGFGFT NE G+ A+IGF + E +TGKG+L
Sbjct: 213 EVRMVVDEGV----GGFGFTPDNEQINGKAAIIGFLLLIDFELLTGKGLL 258
>gi|428317706|ref|YP_007115588.1| CAB/ELIP/HLIP family protein [Oscillatoria nigro-viridis PCC 7112]
gi|428241386|gb|AFZ07172.1| CAB/ELIP/HLIP family protein [Oscillatoria nigro-viridis PCC 7112]
Length = 47
Score = 37.4 bits (85), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 27/38 (71%)
Query: 99 GFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNL 136
GFT+ E + GR+AM+GF L E +TG+GIL+Q+ L
Sbjct: 9 GFTEFAETWNGRLAMLGFVIGLATEFLTGQGILSQIGL 46
>gi|242053441|ref|XP_002455866.1| hypothetical protein SORBIDRAFT_03g026510 [Sorghum bicolor]
gi|241927841|gb|EES00986.1| hypothetical protein SORBIDRAFT_03g026510 [Sorghum bicolor]
Length = 192
Score = 37.4 bits (85), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 32/60 (53%), Gaps = 8/60 (13%)
Query: 77 KTKKVESKPKVEDGIFGTSGGFGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNL 136
K KK+E + + G F FGF +NE+ GR AM GFA +L E TG + Q+ +
Sbjct: 130 KKKKLE---EADQGPF-----FGFLPKNEISNGRWAMFGFAVGMLTEYATGSDFVQQMKI 181
>gi|42562501|ref|NP_564432.3| one-helix protein 2 [Arabidopsis thaliana]
gi|10086479|gb|AAG12539.1|AC015446_20 Unknown protein [Arabidopsis thaliana]
gi|10092446|gb|AAG12849.1|AC079286_6 photosystem II 22 kDa protein, putative; 13290-12539 [Arabidopsis
thaliana]
gi|14190393|gb|AAK55677.1|AF378874_1 At1g34000/F12G12_210 [Arabidopsis thaliana]
gi|15028349|gb|AAK76651.1| unknown protein [Arabidopsis thaliana]
gi|15215883|gb|AAK91485.1| At1g34000/F12G12_210 [Arabidopsis thaliana]
gi|20259283|gb|AAM14377.1| putative photosystem II 22 kDa protein [Arabidopsis thaliana]
gi|23379334|gb|AAL25838.1| one-helix protein [Arabidopsis thaliana]
gi|332193535|gb|AEE31656.1| one-helix protein 2 [Arabidopsis thaliana]
Length = 172
Score = 37.4 bits (85), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 41/86 (47%), Gaps = 11/86 (12%)
Query: 54 AASSSSKAFSTVALFKSKTKAPP---KTKKVESKPKVEDGIFGTSGGFGFTKQNELFVGR 110
A + K+ +TV + K K K KK+E+ G FGF +NE+ GR
Sbjct: 84 AVAVDGKSVTTVEFQRQKAKELQEYFKQKKLEAA--------GQGPFFGFQPKNEISNGR 135
Query: 111 VAMIGFAASLLGEGITGKGILAQLNL 136
AM GFA +L E TG ++ Q+ +
Sbjct: 136 WAMFGFAVGMLTEYATGSDLVDQVKI 161
>gi|87301421|ref|ZP_01084262.1| possible high light inducible protein [Synechococcus sp. WH 5701]
gi|87284389|gb|EAQ76342.1| possible high light inducible protein [Synechococcus sp. WH 5701]
Length = 48
Score = 37.4 bits (85), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 26/39 (66%)
Query: 98 FGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNL 136
FGF E + GR+AM+GF L E +TG+GIL+Q+ L
Sbjct: 9 FGFVNFAETWNGRLAMLGFVIGLATELLTGQGILSQIGL 47
>gi|67925182|ref|ZP_00518551.1| possible high light inducible polypeptide HliC [Crocosphaera
watsonii WH 8501]
gi|416404003|ref|ZP_11687655.1| putative CAB/ELIP/HLIP family protein [Crocosphaera watsonii WH
0003]
gi|67852963|gb|EAM48353.1| possible high light inducible polypeptide HliC [Crocosphaera
watsonii WH 8501]
gi|357261601|gb|EHJ10849.1| putative CAB/ELIP/HLIP family protein [Crocosphaera watsonii WH
0003]
Length = 47
Score = 37.4 bits (85), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 27/39 (69%)
Query: 98 FGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNL 136
GFT E + GR+AM+GF ++ E +TG+GIL+QL L
Sbjct: 8 LGFTAFAENWNGRLAMLGFVIGIVTEYMTGQGILSQLGL 46
>gi|423066287|ref|ZP_17055077.1| hypothetical protein SPLC1_S411850 [Arthrospira platensis C1]
gi|406712329|gb|EKD07518.1| hypothetical protein SPLC1_S411850 [Arthrospira platensis C1]
Length = 69
Score = 37.4 bits (85), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 31/54 (57%), Gaps = 5/54 (9%)
Query: 81 VESKPKVEDGIFGTSGGFGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQL 134
+E + VE+ S FGF K E GR+AMIGF ++L E +TG G++ L
Sbjct: 18 IEPQVYVEE-----SQQFGFNKYAEKLNGRLAMIGFISALALEALTGHGVIGWL 66
>gi|334118123|ref|ZP_08492213.1| CAB/ELIP/HLIP family protein [Microcoleus vaginatus FGP-2]
gi|333460108|gb|EGK88718.1| CAB/ELIP/HLIP family protein [Microcoleus vaginatus FGP-2]
Length = 47
Score = 37.4 bits (85), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 27/38 (71%)
Query: 99 GFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNL 136
GFT+ E + GR+AM+GF L E +TG+GIL+Q+ L
Sbjct: 9 GFTEFAETWNGRLAMLGFVIGLATEFLTGQGILSQIGL 46
>gi|209527668|ref|ZP_03276166.1| conserved hypothetical protein [Arthrospira maxima CS-328]
gi|376002338|ref|ZP_09780174.1| high light-inducible protein (HLIP), CAB/ELIP/HLIP superfamily
[Arthrospira sp. PCC 8005]
gi|209491896|gb|EDZ92253.1| conserved hypothetical protein [Arthrospira maxima CS-328]
gi|375329332|emb|CCE15927.1| high light-inducible protein (HLIP), CAB/ELIP/HLIP superfamily
[Arthrospira sp. PCC 8005]
Length = 69
Score = 37.4 bits (85), Expect = 5.7, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 24/37 (64%)
Query: 98 FGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQL 134
FGF K E GR+AMIGF ++L E +TG G++ L
Sbjct: 30 FGFNKYAEKLNGRLAMIGFISALALEALTGHGVIGWL 66
>gi|254430608|ref|ZP_05044311.1| conserved hypothetical protein [Cyanobium sp. PCC 7001]
gi|197625061|gb|EDY37620.1| conserved hypothetical protein [Cyanobium sp. PCC 7001]
Length = 47
Score = 37.4 bits (85), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 27/39 (69%)
Query: 98 FGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNL 136
FGF+ E + GR+AM+GF L E +TG+GIL+Q+ L
Sbjct: 8 FGFSAFAETWNGRLAMLGFVIGLATELLTGQGILSQVGL 46
>gi|16330195|ref|NP_440923.1| high light inducible protein [Synechocystis sp. PCC 6803]
gi|383321938|ref|YP_005382791.1| CAB/ELIP/HLIP superfamily protein [Synechocystis sp. PCC 6803
substr. GT-I]
gi|383325107|ref|YP_005385960.1| CAB/ELIP/HLIP superfamily protein [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|383490991|ref|YP_005408667.1| CAB/ELIP/HLIP superfamily protein [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|384436258|ref|YP_005650982.1| CAB/ELIP/HLIP superfamily protein [Synechocystis sp. PCC 6803]
gi|451814354|ref|YP_007450806.1| CAB/ELIP/HLIP superfamily [Synechocystis sp. PCC 6803]
gi|1652683|dbj|BAA17603.1| CAB/ELIP/HLIP superfamily [Synechocystis sp. PCC 6803]
gi|339273290|dbj|BAK49777.1| CAB/ELIP/HLIP superfamily protein [Synechocystis sp. PCC 6803]
gi|359271257|dbj|BAL28776.1| CAB/ELIP/HLIP superfamily protein [Synechocystis sp. PCC 6803
substr. GT-I]
gi|359274427|dbj|BAL31945.1| CAB/ELIP/HLIP superfamily protein [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|359277597|dbj|BAL35114.1| CAB/ELIP/HLIP superfamily protein [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|407958104|dbj|BAM51344.1| high light inducible protein [Bacillus subtilis BEST7613]
gi|451780323|gb|AGF51292.1| CAB/ELIP/HLIP superfamily [Synechocystis sp. PCC 6803]
Length = 70
Score = 37.4 bits (85), Expect = 6.0, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 27/34 (79%)
Query: 98 FGFTKQNELFVGRVAMIGFAASLLGEGITGKGIL 131
FGFT E + GR+AMIGF+++L+ E ++G+G+L
Sbjct: 31 FGFTAFAENWNGRLAMIGFSSALILELVSGQGVL 64
>gi|427717467|ref|YP_007065461.1| hypothetical protein Cal7507_2188 [Calothrix sp. PCC 7507]
gi|427349903|gb|AFY32627.1| hypothetical protein Cal7507_2188 [Calothrix sp. PCC 7507]
Length = 109
Score = 37.4 bits (85), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 38/82 (46%), Gaps = 12/82 (14%)
Query: 56 SSSSKAFSTVALFKSKTKAPPKTKKVESKPKVEDGIFGTSGGFGFTKQNELFVGRVAMIG 115
S SS LF P T K+E +PK FGF + E GR AMIG
Sbjct: 40 SQSSLVCQKKELFMISQPKPTNTPKLE-EPK-----------FGFNEYAERLNGRAAMIG 87
Query: 116 FAASLLGEGITGKGILAQLNLE 137
F +L E +T +G+++ L L+
Sbjct: 88 FILMVLIEYVTNQGVISWLGLK 109
>gi|297851834|ref|XP_002893798.1| hypothetical protein ARALYDRAFT_890988 [Arabidopsis lyrata subsp.
lyrata]
gi|297339640|gb|EFH70057.1| hypothetical protein ARALYDRAFT_890988 [Arabidopsis lyrata subsp.
lyrata]
Length = 174
Score = 37.4 bits (85), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 39/80 (48%), Gaps = 11/80 (13%)
Query: 60 KAFSTVALFKSKTKAPP---KTKKVESKPKVEDGIFGTSGGFGFTKQNELFVGRVAMIGF 116
K+ +TV + K K K KK+E+ G FGF +NE+ GR AM GF
Sbjct: 92 KSVTTVEFQRQKAKELQEYFKQKKLEAA--------GQGPFFGFQPKNEISNGRWAMFGF 143
Query: 117 AASLLGEGITGKGILAQLNL 136
A +L E TG ++ Q+ +
Sbjct: 144 AVGMLTEYATGSDLVDQVKI 163
>gi|163867225|gb|ABY47652.1| one-helix protein [Ipomoea nil]
Length = 165
Score = 37.4 bits (85), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 23/39 (58%)
Query: 98 FGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNL 136
FGF +NE+ GR AM GFA +L E TG + QL +
Sbjct: 116 FGFIGKNEISNGRWAMFGFAVGMLTEYATGSDFVDQLKI 154
>gi|86607435|ref|YP_476198.1| CAB/ELIP/HLIP family protein [Synechococcus sp. JA-3-3Ab]
gi|86555977|gb|ABD00935.1| CAB/ELIP/HLIP family protein [Synechococcus sp. JA-3-3Ab]
Length = 56
Score = 37.4 bits (85), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 27/39 (69%)
Query: 98 FGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNL 136
FGFT E + GR+AM+GF + E +TG+GIL+Q+ L
Sbjct: 17 FGFTPFAEKWNGRLAMLGFVIGVATELLTGQGILSQIGL 55
>gi|427702162|ref|YP_007045384.1| Chlorophyll A-B binding protein [Cyanobium gracile PCC 6307]
gi|427345330|gb|AFY28043.1| Chlorophyll A-B binding protein [Cyanobium gracile PCC 6307]
Length = 47
Score = 37.4 bits (85), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 26/39 (66%)
Query: 98 FGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNL 136
FGF E + GR+AM+GF L E +TG+GILAQ+ L
Sbjct: 8 FGFVAFAETWNGRLAMLGFVIGLGTEILTGQGILAQIGL 46
>gi|312281765|dbj|BAJ33748.1| unnamed protein product [Thellungiella halophila]
Length = 177
Score = 37.4 bits (85), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 24/39 (61%)
Query: 98 FGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNL 136
FGF +NE+ GR AM GFA +L E TG ++ Q+ +
Sbjct: 128 FGFQPKNEISNGRWAMFGFAVGMLTEYATGSDLVDQVKI 166
>gi|302191600|tpg|DAA33888.1| TPA_inf: stress-enhanced protein 5 [Glaucocystis nostochinearum]
Length = 169
Score = 37.0 bits (84), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 98 FGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNL-ETGIPIYEAEPLLLFFILFT 156
FG + E F GR AM+GF L+ E +TG+GI Q+ L +T + L LFT
Sbjct: 91 FGMVQFAEQFNGRAAMLGFVLGLVTEYLTGEGIFEQVGLVDTKSQLLFLLALTTTSALFT 150
Query: 157 LLGAI 161
LLG +
Sbjct: 151 LLGYV 155
>gi|18409870|ref|NP_565018.1| Rieske (2Fe-2S) domain-containing protein [Arabidopsis thaliana]
gi|12323736|gb|AAG51832.1|AC016163_21 unknown protein; 39989-38742 [Arabidopsis thaliana]
gi|20260264|gb|AAM13030.1| unknown protein [Arabidopsis thaliana]
gi|21592833|gb|AAM64783.1| unknown [Arabidopsis thaliana]
gi|22136512|gb|AAM91334.1| unknown protein [Arabidopsis thaliana]
gi|26453214|dbj|BAC43681.1| unknown protein [Arabidopsis thaliana]
gi|332197087|gb|AEE35208.1| Rieske (2Fe-2S) domain-containing protein [Arabidopsis thaliana]
Length = 287
Score = 37.0 bits (84), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 27/37 (72%)
Query: 95 SGGFGFTKQNELFVGRVAMIGFAASLLGEGITGKGIL 131
S GFGFTK+NE+ G+ A+IGF L E +TGKG+L
Sbjct: 234 SEGFGFTKKNEVINGKAAVIGFLLLLDFELLTGKGLL 270
>gi|428307586|ref|YP_007144411.1| high light inducible protein [Crinalium epipsammum PCC 9333]
gi|428249121|gb|AFZ14901.1| high light inducible protein [Crinalium epipsammum PCC 9333]
Length = 62
Score = 37.0 bits (84), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 28/47 (59%)
Query: 85 PKVEDGIFGTSGGFGFTKQNELFVGRVAMIGFAASLLGEGITGKGIL 131
P + D + GFT Q E++ GR+AM+GFA ++ E +G GIL
Sbjct: 10 PPIMDAADRNAWKTGFTPQAEIWNGRLAMLGFAIGIIIELTSGDGIL 56
>gi|443325403|ref|ZP_21054100.1| hypothetical protein Xen7305DRAFT_00041230 [Xenococcus sp. PCC
7305]
gi|442795000|gb|ELS04390.1| hypothetical protein Xen7305DRAFT_00041230 [Xenococcus sp. PCC
7305]
Length = 47
Score = 37.0 bits (84), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 27/39 (69%)
Query: 98 FGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNL 136
FGFT+ E + GR+AM+G + E +TG+GIL+QL L
Sbjct: 8 FGFTQFAENWNGRLAMLGLVVGIATEVMTGQGILSQLGL 46
>gi|158338029|ref|YP_001519205.1| high light inducible protein [Acaryochloris marina MBIC11017]
gi|359462351|ref|ZP_09250914.1| high light inducible protein [Acaryochloris sp. CCMEE 5410]
gi|158308270|gb|ABW29887.1| high light inducible protein [Acaryochloris marina MBIC11017]
Length = 52
Score = 37.0 bits (84), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 26/37 (70%)
Query: 98 FGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQL 134
+GFT E F GR+AM+GF + E I+G+G+LAQ+
Sbjct: 10 WGFTDFAENFSGRLAMLGFFLGFVTEVISGEGMLAQI 46
>gi|87301154|ref|ZP_01083995.1| possible high light inducible polypeptide HliC [Synechococcus sp.
WH 5701]
gi|87284122|gb|EAQ76075.1| possible high light inducible polypeptide HliC [Synechococcus sp.
WH 5701]
Length = 47
Score = 37.0 bits (84), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 26/39 (66%)
Query: 98 FGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNL 136
FGF E + GR+AM+GF L E +TG+GIL+Q+ L
Sbjct: 8 FGFVAFAETWNGRLAMLGFVIGLATELLTGQGILSQIGL 46
>gi|33865865|ref|NP_897424.1| high light inducible protein [Synechococcus sp. WH 8102]
gi|33633035|emb|CAE07846.1| possible high light inducible protein [Synechococcus sp. WH 8102]
Length = 77
Score = 37.0 bits (84), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 27/38 (71%), Gaps = 3/38 (7%)
Query: 109 GRVAMIGFAASLLGEGITGKGILAQLNLETGIPIYEAE 146
GR AM+GF+A++LGE TG+GI+ QL TG+ + E
Sbjct: 41 GRAAMVGFSAAVLGELFTGQGIVGQL---TGVVRWYLE 75
>gi|113954603|ref|YP_731722.1| Lhc-like protein Lhl4 [Synechococcus sp. CC9311]
gi|113881954|gb|ABI46912.1| Lhc-like protein Lhl4 [Synechococcus sp. CC9311]
Length = 51
Score = 37.0 bits (84), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 27/43 (62%)
Query: 94 TSGGFGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNL 136
TS FGF E + GR+AM+GF L E +TG+GIL Q+ L
Sbjct: 8 TSSRFGFVNFAETWNGRLAMLGFVIGLGTELLTGQGILTQVGL 50
>gi|384253496|gb|EIE26971.1| hypothetical protein COCSUDRAFT_59463 [Coccomyxa subellipsoidea
C-169]
Length = 169
Score = 37.0 bits (84), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 17/88 (19%)
Query: 70 SKTKAPPKTKKVESKPKVEDGIFGTSGGFGFTKQNELFVGRVAMIGFAASLLGEGITGKG 129
+ T+ P T S P + D I SG E GR+AM+GF A++ E ++GKG
Sbjct: 45 ADTQPTPSTSDAGSVPNIGD-IMAFSG-----PAPERTNGRLAMLGFVAAVAAELVSGKG 98
Query: 130 ILAQLNLETGIPIYEAEPLLL--FFILF 155
+L+Q + EP L+ F+LF
Sbjct: 99 VLSQ---------WAQEPTLITVTFVLF 117
>gi|359462896|ref|ZP_09251459.1| high intensity light-inducible lhc-like protein [Acaryochloris sp.
CCMEE 5410]
Length = 47
Score = 37.0 bits (84), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 25/37 (67%)
Query: 98 FGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQL 134
FGFT+ E + GR+AM+GF S++ E +TG G+ L
Sbjct: 8 FGFTQFAETWSGRLAMLGFTFSIIAELVTGHGLYNYL 44
>gi|148241469|ref|YP_001226626.1| high light inducible protein [Synechococcus sp. RCC307]
gi|147849779|emb|CAK27273.1| High light inducible protein [Synechococcus sp. RCC307]
Length = 48
Score = 37.0 bits (84), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 26/39 (66%)
Query: 98 FGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNL 136
FGF E + GR+AM+GF L E +TG+GIL+QL L
Sbjct: 9 FGFVNFAETWNGRLAMMGFVIGLGTELLTGQGILSQLGL 47
>gi|416386758|ref|ZP_11684969.1| CAB/ELIP/HLIP-related protein [Crocosphaera watsonii WH 0003]
gi|357264653|gb|EHJ13512.1| CAB/ELIP/HLIP-related protein [Crocosphaera watsonii WH 0003]
Length = 58
Score = 37.0 bits (84), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 7/62 (11%)
Query: 76 PKTKKVESKPKVEDGIFGTSGGFGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLN 135
P T+ E+ PK+E+ FGF E GR AM+GF L E TG+G+L+ L
Sbjct: 4 PSTQPTET-PKLENP------KFGFNDYAERLNGRAAMVGFLLVLAIEYFTGQGLLSWLG 56
Query: 136 LE 137
L+
Sbjct: 57 LQ 58
>gi|356576079|ref|XP_003556162.1| PREDICTED: uncharacterized protein LOC100776918 [Glycine max]
Length = 173
Score = 37.0 bits (84), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 23/39 (58%)
Query: 98 FGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNL 136
FGF +NE+ GR AM GFA LL E TG + Q+ +
Sbjct: 124 FGFIGKNEISNGRWAMFGFAVGLLTEYATGSDFVDQVKI 162
>gi|78185789|ref|YP_378223.1| high light inducible protein [Synechococcus sp. CC9902]
gi|116071903|ref|ZP_01469171.1| putative high light inducible protein [Synechococcus sp. BL107]
gi|78170083|gb|ABB27180.1| putative high light inducible protein [Synechococcus sp. CC9902]
gi|116065526|gb|EAU71284.1| putative high light inducible protein [Synechococcus sp. BL107]
Length = 78
Score = 37.0 bits (84), Expect = 7.5, Method: Composition-based stats.
Identities = 19/44 (43%), Positives = 26/44 (59%)
Query: 102 KQNELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGIPIYEA 145
K+ ELF GR AM+G ++ EG+TG GI Q+ L + Y A
Sbjct: 25 KRVELFNGRAAMLGIVIGIVTEGLTGAGIAHQIGLGALVDGYAA 68
>gi|88808269|ref|ZP_01123779.1| possible high light inducible protein [Synechococcus sp. WH 7805]
gi|88787257|gb|EAR18414.1| possible high light inducible protein [Synechococcus sp. WH 7805]
Length = 66
Score = 37.0 bits (84), Expect = 7.5, Method: Composition-based stats.
Identities = 17/32 (53%), Positives = 22/32 (68%)
Query: 105 ELFVGRVAMIGFAASLLGEGITGKGILAQLNL 136
EL GRVAM+GF +L E +TG GIL+Q+
Sbjct: 29 ELLNGRVAMLGFVIGVLTEALTGHGILSQITF 60
>gi|21536765|gb|AAM61097.1| unknown [Arabidopsis thaliana]
Length = 171
Score = 37.0 bits (84), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 24/39 (61%)
Query: 98 FGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNL 136
FGF +NE+ GR AM GFA +L E TG ++ Q+ +
Sbjct: 122 FGFQPKNEISNGRWAMFGFAVGMLTEYATGSDLVDQVKI 160
>gi|409991837|ref|ZP_11275065.1| CAB/ELIP/HLIP family protein [Arthrospira platensis str. Paraca]
gi|291569075|dbj|BAI91347.1| high light inducible protein [Arthrospira platensis NIES-39]
gi|409937302|gb|EKN78738.1| CAB/ELIP/HLIP family protein [Arthrospira platensis str. Paraca]
Length = 69
Score = 37.0 bits (84), Expect = 7.6, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 24/37 (64%)
Query: 98 FGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQL 134
FGF K E GR+AMIGF ++L E +TG G++ L
Sbjct: 30 FGFNKHAEKLNGRLAMIGFVSALALEVLTGHGLIGWL 66
>gi|116072747|ref|ZP_01470013.1| possible high light inducible protein [Synechococcus sp. BL107]
gi|116064634|gb|EAU70394.1| possible high light inducible protein [Synechococcus sp. BL107]
Length = 47
Score = 37.0 bits (84), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 27/39 (69%)
Query: 98 FGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNL 136
FGF+ E + GR+AM+GF L E +TG+GIL+Q+ L
Sbjct: 9 FGFSNFAETWNGRLAMLGFVIGLGTELLTGQGILSQIGL 47
>gi|300868809|ref|ZP_07113416.1| CAB/ELIP/HLIP-related protein [Oscillatoria sp. PCC 6506]
gi|300333160|emb|CBN58608.1| CAB/ELIP/HLIP-related protein [Oscillatoria sp. PCC 6506]
Length = 56
Score = 37.0 bits (84), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 24/39 (61%)
Query: 98 FGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNL 136
FGF E GR AM+GF +L+ E TG+G+L+ L L
Sbjct: 17 FGFNDYAERLNGRAAMVGFTLTLIIEYFTGQGLLSWLGL 55
>gi|148243080|ref|YP_001228237.1| high light inducible protein [Synechococcus sp. RCC307]
gi|147851390|emb|CAK28884.1| High light inducible protein [Synechococcus sp. RCC307]
Length = 65
Score = 37.0 bits (84), Expect = 7.8, Method: Composition-based stats.
Identities = 17/35 (48%), Positives = 24/35 (68%)
Query: 102 KQNELFVGRVAMIGFAASLLGEGITGKGILAQLNL 136
++ EL GR AM+GF +L E ITG GI++Q+ L
Sbjct: 25 EKAELLNGRAAMLGFVIGVLTEAITGHGIVSQITL 59
>gi|158336331|ref|YP_001517505.1| high light inducible protein [Acaryochloris marina MBIC11017]
gi|359463567|ref|ZP_09252130.1| high light inducible protein [Acaryochloris sp. CCMEE 5410]
gi|158306572|gb|ABW28189.1| high light inducible protein [Acaryochloris marina MBIC11017]
Length = 50
Score = 37.0 bits (84), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 27/37 (72%)
Query: 98 FGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQL 134
FGFT E GR+AM+GF+ +++ E +TG+GI+ Q+
Sbjct: 8 FGFTSFAETLGGRLAMVGFSLAVITEVLTGQGIVGQI 44
>gi|148239273|ref|YP_001224660.1| high light inducible protein [Synechococcus sp. WH 7803]
gi|147847812|emb|CAK23363.1| High light inducible protein [Synechococcus sp. WH 7803]
Length = 66
Score = 37.0 bits (84), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 22/31 (70%)
Query: 105 ELFVGRVAMIGFAASLLGEGITGKGILAQLN 135
EL GRVAM+GF +L E +TG GIL+Q+
Sbjct: 29 ELLNGRVAMLGFVIGVLTEALTGHGILSQIT 59
>gi|86604929|ref|YP_473692.1| CAB/ELIP/HLIP family protein [Synechococcus sp. JA-3-3Ab]
gi|86608723|ref|YP_477485.1| CAB/ELIP/HLIP family protein [Synechococcus sp. JA-2-3B'a(2-13)]
gi|86553471|gb|ABC98429.1| CAB/ELIP/HLIP family protein [Synechococcus sp. JA-3-3Ab]
gi|86557265|gb|ABD02222.1| CAB/ELIP/HLIP family protein [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 50
Score = 37.0 bits (84), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 25/39 (64%)
Query: 98 FGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNL 136
FGF + E GR AMIGF +++ E +TG+G+ + L L
Sbjct: 11 FGFNEYAERLNGRAAMIGFVLAIVIEAVTGQGVASWLGL 49
>gi|172038496|ref|YP_001804997.1| putative CAB/ELIP/HLIP family protein [Cyanothece sp. ATCC 51142]
gi|354554159|ref|ZP_08973464.1| Chlorophyll A-B binding protein [Cyanothece sp. ATCC 51472]
gi|171699950|gb|ACB52931.1| putative CAB/ELIP/HLIP family protein [Cyanothece sp. ATCC 51142]
gi|353553838|gb|EHC23229.1| Chlorophyll A-B binding protein [Cyanothece sp. ATCC 51472]
Length = 58
Score = 37.0 bits (84), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 7/62 (11%)
Query: 76 PKTKKVESKPKVEDGIFGTSGGFGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLN 135
P T+ E+ P +E+ FGF E GR AM+GF L+ E +TG+G+L+ L
Sbjct: 4 PSTQPTET-PNLEEP------KFGFNDYAERLNGRAAMVGFLLILVIEYLTGQGLLSWLG 56
Query: 136 LE 137
L+
Sbjct: 57 LQ 58
>gi|357443565|ref|XP_003592060.1| One-helix protein [Medicago truncatula]
gi|355481108|gb|AES62311.1| One-helix protein [Medicago truncatula]
gi|388511839|gb|AFK43981.1| unknown [Medicago truncatula]
Length = 175
Score = 37.0 bits (84), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 23/39 (58%)
Query: 98 FGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNL 136
FGF +NE+ GR AM GFA LL E TG + Q+ +
Sbjct: 126 FGFIAKNEISNGRWAMFGFAVGLLTEFATGSDFVDQVKI 164
>gi|443323302|ref|ZP_21052310.1| Chlorophyll A-B binding protein [Gloeocapsa sp. PCC 73106]
gi|442787040|gb|ELR96765.1| Chlorophyll A-B binding protein [Gloeocapsa sp. PCC 73106]
Length = 56
Score = 37.0 bits (84), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 25/40 (62%)
Query: 98 FGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNLE 137
FGF + E GR AMIGF +L E ++G+G+L L L+
Sbjct: 17 FGFNEYAERLNGRAAMIGFVLVILIEYLSGQGLLTWLGLQ 56
>gi|427734592|ref|YP_007054136.1| Chlorophyll A-B binding protein [Rivularia sp. PCC 7116]
gi|427369633|gb|AFY53589.1| Chlorophyll A-B binding protein [Rivularia sp. PCC 7116]
Length = 59
Score = 37.0 bits (84), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 25/34 (73%)
Query: 98 FGFTKQNELFVGRVAMIGFAASLLGEGITGKGIL 131
+GFT Q E++ GR+AMIGF A+ L E +G+G L
Sbjct: 20 WGFTPQAEIWNGRLAMIGFLAAALIELFSGEGFL 53
>gi|255555305|ref|XP_002518689.1| ADP-ribosylation factor, arf, putative [Ricinus communis]
gi|223542070|gb|EEF43614.1| ADP-ribosylation factor, arf, putative [Ricinus communis]
Length = 376
Score = 37.0 bits (84), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 29/43 (67%), Gaps = 2/43 (4%)
Query: 101 TKQNEL--FVGRVAMIGFAASLLGEGITGKGILAQLNLETGIP 141
T+ N L ++GR+AM+GFAA++ E TGKG+L L + +P
Sbjct: 76 TQDNSLDVWLGRLAMVGFAAAISVEIATGKGLLENFGLTSPLP 118
>gi|126659595|ref|ZP_01730726.1| CAB/ELIP/HLIP-related protein [Cyanothece sp. CCY0110]
gi|126619138|gb|EAZ89876.1| CAB/ELIP/HLIP-related protein [Cyanothece sp. CCY0110]
Length = 58
Score = 37.0 bits (84), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 25/40 (62%)
Query: 98 FGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNLE 137
FGF E GR AM+GF L+ E +TG+G+L+ L L+
Sbjct: 19 FGFNDYAERLNGRAAMVGFLLILVIEYLTGQGLLSWLGLQ 58
>gi|443313415|ref|ZP_21043026.1| Chlorophyll A-B binding protein [Synechocystis sp. PCC 7509]
gi|442776358|gb|ELR86640.1| Chlorophyll A-B binding protein [Synechocystis sp. PCC 7509]
Length = 68
Score = 37.0 bits (84), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 26/40 (65%)
Query: 98 FGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNLE 137
FGF + E GR AMIGF+ ++ E +T +G+LA L L+
Sbjct: 29 FGFNEYAERLNGRAAMIGFSIMVIIEYVTNQGMLAWLGLK 68
>gi|356499409|ref|XP_003518533.1| PREDICTED: uncharacterized protein LOC100804460 isoform 1 [Glycine
max]
gi|356499411|ref|XP_003518534.1| PREDICTED: uncharacterized protein LOC100804460 isoform 2 [Glycine
max]
Length = 182
Score = 37.0 bits (84), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 23/39 (58%)
Query: 98 FGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNL 136
FGF +NE+ GR AM GFA LL E TG + Q+ +
Sbjct: 133 FGFIGKNEISNGRWAMFGFAVGLLTEYATGSDFVDQVKI 171
>gi|113475577|ref|YP_721638.1| CAB/ELIP/HLIP-like protein [Trichodesmium erythraeum IMS101]
gi|110166625|gb|ABG51165.1| CAB/ELIP/HLIP-related protein [Trichodesmium erythraeum IMS101]
Length = 56
Score = 36.6 bits (83), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 24/39 (61%)
Query: 98 FGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNL 136
FGF + E GR AMIGF +L E TG+G+L+ L L
Sbjct: 17 FGFNQYAERLNGRAAMIGFVLTLAIEYFTGEGLLSWLGL 55
>gi|254430234|ref|ZP_05043937.1| conserved hypothetical protein [Cyanobium sp. PCC 7001]
gi|197624687|gb|EDY37246.1| conserved hypothetical protein [Cyanobium sp. PCC 7001]
Length = 48
Score = 36.6 bits (83), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 27/43 (62%)
Query: 94 TSGGFGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNL 136
T+ FGF E + GR+AM+GF L E +TG+GIL Q+ L
Sbjct: 5 TTSRFGFVAFAETWNGRLAMLGFTIGLATELLTGQGILGQIGL 47
>gi|158336371|ref|YP_001517545.1| high light inducible protein [Acaryochloris marina MBIC11017]
gi|359459296|ref|ZP_09247859.1| high light inducible protein [Acaryochloris sp. CCMEE 5410]
gi|158306612|gb|ABW28229.1| high light inducible protein [Acaryochloris marina MBIC11017]
Length = 50
Score = 36.6 bits (83), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 27/37 (72%)
Query: 98 FGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQL 134
+GFT E F GR+AM+GF +L+ E +TG+GI+ Q+
Sbjct: 8 WGFTDFAETFGGRLAMMGFFLALVTEVLTGQGIVGQI 44
>gi|87302724|ref|ZP_01085535.1| possible high light inducible protein [Synechococcus sp. WH 5701]
gi|87282607|gb|EAQ74565.1| possible high light inducible protein [Synechococcus sp. WH 5701]
Length = 47
Score = 36.6 bits (83), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 25/39 (64%)
Query: 98 FGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNL 136
FGF E + GR+AM+GF L E +TG+GIL Q+ L
Sbjct: 8 FGFVSFAETWNGRLAMLGFVIGLATELLTGQGILGQIGL 46
>gi|172035518|ref|YP_001802019.1| CAB/ELIP/HLIP family protein [Cyanothece sp. ATCC 51142]
gi|171696972|gb|ACB49953.1| probable CAB/ELIP/HLIP family protein [Cyanothece sp. ATCC 51142]
Length = 91
Score = 36.6 bits (83), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 24/37 (64%)
Query: 98 FGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQL 134
FGF K E GR+AMIGF + L E +TG+G++ L
Sbjct: 52 FGFNKYAEKLNGRLAMIGFISLLAFESLTGQGLVTWL 88
>gi|149071974|ref|YP_001293490.1| high light inducible protein [Rhodomonas salina]
gi|134302925|gb|ABO70729.1| high light inducible protein [Rhodomonas salina]
Length = 52
Score = 36.6 bits (83), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 26/39 (66%)
Query: 98 FGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNL 136
+GFT E + GR AM+GF +L+ E ITGKG+L L L
Sbjct: 13 WGFTSSAENWNGRFAMLGFFLTLVIEFITGKGLLHFLGL 51
>gi|224001924|ref|XP_002290634.1| sep-like protein [Thalassiosira pseudonana CCMP1335]
gi|220974056|gb|EED92386.1| sep-like protein [Thalassiosira pseudonana CCMP1335]
Length = 147
Score = 36.6 bits (83), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 24/37 (64%)
Query: 98 FGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQL 134
+G K E++ GRVA + F LL E ITGKG++A +
Sbjct: 75 WGLKKNAEIWNGRVAQMAFTIVLLQELITGKGVVASI 111
>gi|260435579|ref|ZP_05789549.1| conserved domain protein [Synechococcus sp. WH 8109]
gi|260413453|gb|EEX06749.1| conserved domain protein [Synechococcus sp. WH 8109]
Length = 65
Score = 36.6 bits (83), Expect = 9.4, Method: Composition-based stats.
Identities = 17/35 (48%), Positives = 23/35 (65%)
Query: 102 KQNELFVGRVAMIGFAASLLGEGITGKGILAQLNL 136
++ EL GRVAMIGF +L E +TG GI +Q+
Sbjct: 25 ERAELLNGRVAMIGFVVGVLTEALTGHGIASQITF 59
>gi|427710430|ref|YP_007052807.1| CAB/ELIP/HLIP family protein [Nostoc sp. PCC 7107]
gi|427362935|gb|AFY45657.1| CAB/ELIP/HLIP-related protein [Nostoc sp. PCC 7107]
Length = 56
Score = 36.6 bits (83), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 6/53 (11%)
Query: 85 PKVEDGIFGTSGGFGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNLE 137
PK+ED FGF + E GR AMIGF ++ E +T +G+L+ L L+
Sbjct: 10 PKLEDP------KFGFNEYAERLNGRAAMIGFGLMVVIEYVTNQGVLSWLGLK 56
>gi|198284725|ref|YP_002221046.1| ABC-2 type transporter [Acidithiobacillus ferrooxidans ATCC 53993]
gi|218667268|ref|YP_002427403.1| ABC transporter [Acidithiobacillus ferrooxidans ATCC 23270]
gi|198249246|gb|ACH84839.1| ABC-2 type transporter [Acidithiobacillus ferrooxidans ATCC 53993]
gi|218519481|gb|ACK80067.1| ABC-2 type transporter [Acidithiobacillus ferrooxidans ATCC 23270]
Length = 268
Score = 36.6 bits (83), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 61/147 (41%), Gaps = 29/147 (19%)
Query: 104 NELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGA--I 161
E+FV VA AS+L + G ILA + IP+ L+ ILFTLLGA +
Sbjct: 115 TEIFVAMVA-----ASVLRGALVGLAILALALIFLHIPLLHP----LWIILFTLLGASGM 165
Query: 162 GALG-DRGKFVDEPDEPTGLGGAVIPPGKGLRSALGLKEGGKGALAQLNIETGIPINEIE 220
GALG G + ++ D+ G VI P L + GA QL+
Sbjct: 166 GALGLVAGLWAEKFDQIAGFQNFVIMPLTFLAGVFYSVQSLPGAWRQLS----------- 214
Query: 221 PLVLFNVIFFFVAALNPGTGKFVTDED 247
LFN F+ + G F D D
Sbjct: 215 ---LFNPFFYIIDGFRYG---FFADSD 235
>gi|257480327|gb|ACV60362.1| putative one-helix protein [Camellia sinensis]
Length = 174
Score = 36.6 bits (83), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 23/39 (58%)
Query: 98 FGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNL 136
FGF +NE+ GR AM GFA +L E TG + Q+ +
Sbjct: 125 FGFIAKNEISNGRWAMFGFAVGMLTEYATGSDFVDQVKI 163
>gi|17231218|ref|NP_487766.1| high light inducible protein [Nostoc sp. PCC 7120]
gi|17132860|dbj|BAB75425.1| CAB/ELIP/HLIP superfamily [Nostoc sp. PCC 7120]
Length = 59
Score = 36.6 bits (83), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 9/56 (16%)
Query: 76 PKTKKVESKPKVEDGIFGTSGGFGFTKQNELFVGRVAMIGFAASLLGEGITGKGIL 131
PK+ ES V FGFT ++E + GR AMIGF + +L E +G+G L
Sbjct: 7 PKSTVTESPNAVR---------FGFTSESESWNGRFAMIGFLSIVLIEAFSGQGFL 53
>gi|119490245|ref|ZP_01622758.1| hypothetical protein L8106_16144 [Lyngbya sp. PCC 8106]
gi|119454131|gb|EAW35284.1| hypothetical protein L8106_16144 [Lyngbya sp. PCC 8106]
Length = 70
Score = 36.6 bits (83), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 34/55 (61%), Gaps = 7/55 (12%)
Query: 81 VESKPKVEDGIFGTSGGFGFTKQNELFVGRVAMIGFAASLLG-EGITGKGILAQL 134
VE K V+D + GFT+ E GR+AMIGF SL+G E +TG+GIL+ L
Sbjct: 19 VEPKMYVDD-----TPSTGFTQYAEKLNGRLAMIGF-VSLIGLEAVTGQGILSWL 67
>gi|158337699|ref|YP_001518875.1| high light inducible protein [Acaryochloris marina MBIC11017]
gi|158307940|gb|ABW29557.1| high light inducible protein [Acaryochloris marina MBIC11017]
Length = 47
Score = 36.6 bits (83), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 25/34 (73%)
Query: 98 FGFTKQNELFVGRVAMIGFAASLLGEGITGKGIL 131
FGF E + GR+AM+GF A+++ E +TGKG+L
Sbjct: 8 FGFNPFAEAWSGRLAMVGFYAAIIIELVTGKGVL 41
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.137 0.387
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,963,309,671
Number of Sequences: 23463169
Number of extensions: 174734896
Number of successful extensions: 482501
Number of sequences better than 100.0: 441
Number of HSP's better than 100.0 without gapping: 370
Number of HSP's successfully gapped in prelim test: 71
Number of HSP's that attempted gapping in prelim test: 481778
Number of HSP's gapped (non-prelim): 517
length of query: 249
length of database: 8,064,228,071
effective HSP length: 139
effective length of query: 110
effective length of database: 9,097,814,876
effective search space: 1000759636360
effective search space used: 1000759636360
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 75 (33.5 bits)