BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 025670
(249 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225423749|ref|XP_002277069.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit 2,
mitochondrial-like [Vitis vinifera]
Length = 241
Score = 425 bits (1093), Expect = e-117, Method: Compositional matrix adjust.
Identities = 204/246 (82%), Positives = 221/246 (89%), Gaps = 7/246 (2%)
Query: 4 MRNLLSRTSMATKFLQLSKPSAQISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICI 63
MR L S AT +L + +S RS++LIPMVIEHSSRGERAYDIFSRLLKERI+CI
Sbjct: 1 MRALTKLCSAATG-RRLFPAATAVSTRSYALIPMVIEHSSRGERAYDIFSRLLKERIVCI 59
Query: 64 NGPINDDTAHVVVAQLLFLESENPSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTIC 123
NGPI+DDTAHVVVAQLLFLESENPSKPIHMYLNSPGG V+AGLAIYDTMQYIRSP+NTIC
Sbjct: 60 NGPISDDTAHVVVAQLLFLESENPSKPIHMYLNSPGGAVSAGLAIYDTMQYIRSPVNTIC 119
Query: 124 LGQAASMGSLLLASGTKGERRALPNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNA 183
LGQAASMGSLLLA+G KGERRALPN+TIMIHQPSGGYSGQAKDMTIHTKQI+RVWD+LNA
Sbjct: 120 LGQAASMGSLLLAAGAKGERRALPNATIMIHQPSGGYSGQAKDMTIHTKQIIRVWDSLNA 179
Query: 184 LYCKHTGQSIEVIQKNMDRDYFMTPEEAKEFGIIDEVIDQRPMALVTDAVGREGKEGKEG 243
LY KHTGQS+++IQKNMDRDYFMTPEEAKEFGIIDEVIDQRPMALVTDAV G EG
Sbjct: 180 LYAKHTGQSLDIIQKNMDRDYFMTPEEAKEFGIIDEVIDQRPMALVTDAV------GNEG 233
Query: 244 KEKGSN 249
K+KGSN
Sbjct: 234 KDKGSN 239
>gi|147797194|emb|CAN64666.1| hypothetical protein VITISV_024612 [Vitis vinifera]
Length = 221
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 198/224 (88%), Positives = 213/224 (95%), Gaps = 6/224 (2%)
Query: 26 QISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESE 85
Q+S RS++LIPMVIEHSSRGERAYDIFSRLLKERI+CINGPI+DDTAHVVVAQLLFLESE
Sbjct: 2 QVSTRSYALIPMVIEHSSRGERAYDIFSRLLKERIVCINGPISDDTAHVVVAQLLFLESE 61
Query: 86 NPSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRA 145
NPSKPIHMYLNSPGG V+AGLAIYDTMQYIRSP+NTICLGQAASMGSLLLA+G KGERRA
Sbjct: 62 NPSKPIHMYLNSPGGAVSAGLAIYDTMQYIRSPVNTICLGQAASMGSLLLAAGAKGERRA 121
Query: 146 LPNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYF 205
LPN+TIMIHQPSGGYSGQAKDMTIHTKQI+RVWD+LNALY KHTGQS+++IQKNMDRDYF
Sbjct: 122 LPNATIMIHQPSGGYSGQAKDMTIHTKQIIRVWDSLNALYAKHTGQSLDIIQKNMDRDYF 181
Query: 206 MTPEEAKEFGIIDEVIDQRPMALVTDAVGREGKEGKEGKEKGSN 249
MTPEEAKEFGIIDEVIDQRPMALVTDAV G EGK+KGSN
Sbjct: 182 MTPEEAKEFGIIDEVIDQRPMALVTDAV------GNEGKDKGSN 219
>gi|255565556|ref|XP_002523768.1| ATP-dependent Clp protease proteolytic subunit, putative [Ricinus
communis]
gi|223536980|gb|EEF38617.1| ATP-dependent Clp protease proteolytic subunit, putative [Ricinus
communis]
Length = 296
Score = 422 bits (1086), Expect = e-116, Method: Compositional matrix adjust.
Identities = 200/241 (82%), Positives = 218/241 (90%), Gaps = 5/241 (2%)
Query: 3 SMRNLLSR----TSMATKFLQLSKPSAQISARSFSLIPMVIEHSSRGERAYDIFSRLLKE 58
+MR L+S T+ T+ LS PS + + R++ L+PMVIEHSSRGERAYDIFSRLLKE
Sbjct: 53 AMRGLISSAKLFTTTRTRIPMLSNPSIR-NTRAYGLVPMVIEHSSRGERAYDIFSRLLKE 111
Query: 59 RIICINGPINDDTAHVVVAQLLFLESENPSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSP 118
RI+CINGPINDDTAHVVVAQLLFLESENPSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSP
Sbjct: 112 RIVCINGPINDDTAHVVVAQLLFLESENPSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSP 171
Query: 119 INTICLGQAASMGSLLLASGTKGERRALPNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVW 178
INTICLGQAASM SLLLA+G KGER++LPN+TIMIHQPSGGYSGQAKDMTIHTKQIVRVW
Sbjct: 172 INTICLGQAASMASLLLAAGAKGERKSLPNATIMIHQPSGGYSGQAKDMTIHTKQIVRVW 231
Query: 179 DALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKEFGIIDEVIDQRPMALVTDAVGREGK 238
D+LN LY KHTGQS++VIQKNMDRDYFMTPEEAKEFGIIDEVIDQRPM LV DAVG EGK
Sbjct: 232 DSLNQLYSKHTGQSVDVIQKNMDRDYFMTPEEAKEFGIIDEVIDQRPMTLVADAVGSEGK 291
Query: 239 E 239
+
Sbjct: 292 D 292
>gi|224081363|ref|XP_002306383.1| predicted protein [Populus trichocarpa]
gi|118481948|gb|ABK92906.1| unknown [Populus trichocarpa]
gi|222855832|gb|EEE93379.1| predicted protein [Populus trichocarpa]
Length = 244
Score = 416 bits (1068), Expect = e-114, Method: Compositional matrix adjust.
Identities = 198/241 (82%), Positives = 215/241 (89%), Gaps = 6/241 (2%)
Query: 4 MRNLLSRTSMATKFLQLSKPSAQIS-----ARSFSLIPMVIEHSSRGERAYDIFSRLLKE 58
M+ L S T + T + KPS ++ R++SLIPMVIEHSSRGERAYDIFSRLLKE
Sbjct: 1 MKALFSTTKLITSTAK-PKPSFLLTPKTSTTRAYSLIPMVIEHSSRGERAYDIFSRLLKE 59
Query: 59 RIICINGPINDDTAHVVVAQLLFLESENPSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSP 118
RI+CINGPINDDT++VVVAQLLFLESENPSKPIHMYLNSPGG VTAGLAIYDTMQYIRSP
Sbjct: 60 RIVCINGPINDDTSNVVVAQLLFLESENPSKPIHMYLNSPGGHVTAGLAIYDTMQYIRSP 119
Query: 119 INTICLGQAASMGSLLLASGTKGERRALPNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVW 178
+NTICLGQAASM SLLLASG KGER+ALPN+TIMIHQPSGGYSGQAKD+TIHTKQIVRVW
Sbjct: 120 VNTICLGQAASMASLLLASGAKGERKALPNATIMIHQPSGGYSGQAKDLTIHTKQIVRVW 179
Query: 179 DALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKEFGIIDEVIDQRPMALVTDAVGREGK 238
DALN LYCKHTG+ I+VIQKNMDRDYFMTPEEAKEFGIIDEVIDQRPM LVTDAVG E K
Sbjct: 180 DALNQLYCKHTGKPIDVIQKNMDRDYFMTPEEAKEFGIIDEVIDQRPMTLVTDAVGDESK 239
Query: 239 E 239
+
Sbjct: 240 Q 240
>gi|224094113|ref|XP_002310077.1| predicted protein [Populus trichocarpa]
gi|222852980|gb|EEE90527.1| predicted protein [Populus trichocarpa]
Length = 244
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 196/241 (81%), Positives = 215/241 (89%), Gaps = 6/241 (2%)
Query: 4 MRNLLSRTSMATKFLQLSKPSAQIS-----ARSFSLIPMVIEHSSRGERAYDIFSRLLKE 58
M+ L S + T + +KPS ++ R++SLIPMVIEHSSRGERAYDIFSRLLKE
Sbjct: 1 MKALFSSAKLITSTTK-TKPSFLLTPKISTTRAYSLIPMVIEHSSRGERAYDIFSRLLKE 59
Query: 59 RIICINGPINDDTAHVVVAQLLFLESENPSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSP 118
RI+CINGPI+DDT+HVVVAQLLFLESENPSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSP
Sbjct: 60 RIVCINGPIDDDTSHVVVAQLLFLESENPSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSP 119
Query: 119 INTICLGQAASMGSLLLASGTKGERRALPNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVW 178
+ TICLGQAASM SLLLA+G KGER+ALPN+TIMIHQPSGGYSGQAKDMTIHTKQIVRVW
Sbjct: 120 VTTICLGQAASMASLLLAAGAKGERKALPNATIMIHQPSGGYSGQAKDMTIHTKQIVRVW 179
Query: 179 DALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKEFGIIDEVIDQRPMALVTDAVGREGK 238
DALN LYCKHTGQ ++VIQKNMDRDYFMTPEEAKEFGIID+VIDQRPM LVTDAV EGK
Sbjct: 180 DALNQLYCKHTGQPLDVIQKNMDRDYFMTPEEAKEFGIIDDVIDQRPMTLVTDAVDDEGK 239
Query: 239 E 239
+
Sbjct: 240 Q 240
>gi|297737943|emb|CBI27144.3| unnamed protein product [Vitis vinifera]
Length = 209
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 191/213 (89%), Positives = 203/213 (95%), Gaps = 6/213 (2%)
Query: 37 MVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHMYLN 96
MVIEHSSRGERAYDIFSRLLKERI+CINGPI+DDTAHVVVAQLLFLESENPSKPIHMYLN
Sbjct: 1 MVIEHSSRGERAYDIFSRLLKERIVCINGPISDDTAHVVVAQLLFLESENPSKPIHMYLN 60
Query: 97 SPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMIHQP 156
SPGG V+AGLAIYDTMQYIRSP+NTICLGQAASMGSLLLA+G KGERRALPN+TIMIHQP
Sbjct: 61 SPGGAVSAGLAIYDTMQYIRSPVNTICLGQAASMGSLLLAAGAKGERRALPNATIMIHQP 120
Query: 157 SGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKEFGI 216
SGGYSGQAKDMTIHTKQI+RVWD+LNALY KHTGQS+++IQKNMDRDYFMTPEEAKEFGI
Sbjct: 121 SGGYSGQAKDMTIHTKQIIRVWDSLNALYAKHTGQSLDIIQKNMDRDYFMTPEEAKEFGI 180
Query: 217 IDEVIDQRPMALVTDAVGREGKEGKEGKEKGSN 249
IDEVIDQRPMALVTDAV G EGK+KGSN
Sbjct: 181 IDEVIDQRPMALVTDAV------GNEGKDKGSN 207
>gi|388512413|gb|AFK44268.1| unknown [Lotus japonicus]
Length = 243
Score = 406 bits (1044), Expect = e-111, Method: Compositional matrix adjust.
Identities = 198/249 (79%), Positives = 219/249 (87%), Gaps = 9/249 (3%)
Query: 4 MRNLLSRTSM-ATKFL--QLSKPSAQISARSFSLIPMVIEHSSRGERAYDIFSRLLKERI 60
MR +L T + +FL + ++ + + RS+ LIPMVIEHSSRGERAYDIFSRLLKERI
Sbjct: 1 MRGILRSTKLIGNQFLHGRRTEFTQWTANRSYGLIPMVIEHSSRGERAYDIFSRLLKERI 60
Query: 61 ICINGPINDDTAHVVVAQLLFLESENPSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPIN 120
ICINGPI+DDTAHVVVAQLLFLESENPSKPI+MYLNSPGG VTAGLAIYDTMQYIRSPIN
Sbjct: 61 ICINGPISDDTAHVVVAQLLFLESENPSKPINMYLNSPGGAVTAGLAIYDTMQYIRSPIN 120
Query: 121 TICLGQAASMGSLLLASGTKGERRALPNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDA 180
TICLGQAASMGSLLLA+G KG+RR+LPN++IMIHQPSGGYSGQAKD+ IHTKQIVRVWD
Sbjct: 121 TICLGQAASMGSLLLAAGAKGQRRSLPNASIMIHQPSGGYSGQAKDIAIHTKQIVRVWDL 180
Query: 181 LNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKEFGIIDEVIDQRPMALVTDAVGREGKEG 240
LN LY KHTGQSIE+IQKNMDRDYFMTPEEAKEFG+IDEVIDQRPM LV+DAV G
Sbjct: 181 LNDLYAKHTGQSIELIQKNMDRDYFMTPEEAKEFGLIDEVIDQRPMTLVSDAV------G 234
Query: 241 KEGKEKGSN 249
EGK+KGSN
Sbjct: 235 NEGKDKGSN 243
>gi|449461681|ref|XP_004148570.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit 2,
mitochondrial-like [Cucumis sativus]
gi|449522109|ref|XP_004168070.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit 2,
mitochondrial-like [Cucumis sativus]
Length = 243
Score = 406 bits (1044), Expect = e-111, Method: Compositional matrix adjust.
Identities = 193/241 (80%), Positives = 212/241 (87%), Gaps = 8/241 (3%)
Query: 7 LLSRTSMATKFLQLSKPSAQISARS--------FSLIPMVIEHSSRGERAYDIFSRLLKE 58
++ R+ +T L +K +A R+ +SL+PMVIEH+SRGERAYDIFSRLLKE
Sbjct: 1 MIWRSLASTSMLLAAKSTASACGRTAMRDFRRPYSLVPMVIEHTSRGERAYDIFSRLLKE 60
Query: 59 RIICINGPINDDTAHVVVAQLLFLESENPSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSP 118
RIICINGPI+DDTAHVVVAQLLFLESENP+KPI MYLNSPGG VTAGLAIYDTMQYIRSP
Sbjct: 61 RIICINGPISDDTAHVVVAQLLFLESENPTKPISMYLNSPGGAVTAGLAIYDTMQYIRSP 120
Query: 119 INTICLGQAASMGSLLLASGTKGERRALPNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVW 178
INTICLGQAASM SLLLA+G KGERR+LPN+TIMIHQPSGGYSGQAKDMTIHTKQIVRVW
Sbjct: 121 INTICLGQAASMASLLLAAGAKGERRSLPNATIMIHQPSGGYSGQAKDMTIHTKQIVRVW 180
Query: 179 DALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKEFGIIDEVIDQRPMALVTDAVGREGK 238
DALN LY KHT QS+E+IQK MDRDYFMTPEEAKEFGIIDEVIDQRP+ALVTDAVG EGK
Sbjct: 181 DALNELYSKHTSQSVEIIQKYMDRDYFMTPEEAKEFGIIDEVIDQRPIALVTDAVGNEGK 240
Query: 239 E 239
+
Sbjct: 241 D 241
>gi|356538559|ref|XP_003537770.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit 2,
mitochondrial-like isoform 1 [Glycine max]
gi|356538561|ref|XP_003537771.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit 2,
mitochondrial-like isoform 2 [Glycine max]
Length = 238
Score = 402 bits (1034), Expect = e-110, Method: Compositional matrix adjust.
Identities = 190/220 (86%), Positives = 205/220 (93%), Gaps = 6/220 (2%)
Query: 30 RSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSK 89
RS+SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPI+DDTAHVVVAQLLFLESENPSK
Sbjct: 25 RSYSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPISDDTAHVVVAQLLFLESENPSK 84
Query: 90 PIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNS 149
PI+MYLNSPGG VTAGLAIYDTMQYIRSP+NTIC+GQAASMGSLLLA+G KGERR+LPN+
Sbjct: 85 PINMYLNSPGGAVTAGLAIYDTMQYIRSPVNTICMGQAASMGSLLLAAGAKGERRSLPNA 144
Query: 150 TIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPE 209
TIMIHQPSGGYSGQAKD+ IHTK IVRVWD+LN LY KHTGQS+EVIQ NMDRD FMTP+
Sbjct: 145 TIMIHQPSGGYSGQAKDIAIHTKHIVRVWDSLNELYAKHTGQSVEVIQTNMDRDNFMTPK 204
Query: 210 EAKEFGIIDEVIDQRPMALVTDAVGREGKEGKEGKEKGSN 249
EAKEFG+IDEVIDQRPMALV+DAV G EGK+KGSN
Sbjct: 205 EAKEFGLIDEVIDQRPMALVSDAV------GNEGKDKGSN 238
>gi|356544357|ref|XP_003540619.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit 2,
mitochondrial-like [Glycine max]
Length = 236
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 188/221 (85%), Positives = 206/221 (93%), Gaps = 6/221 (2%)
Query: 29 ARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPS 88
+RS+SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPI+DDTAHVVVAQLLFLESENPS
Sbjct: 22 SRSYSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPISDDTAHVVVAQLLFLESENPS 81
Query: 89 KPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPN 148
KPI+MYLNSPGG ++AGLAIYDTMQYIRSP+NTIC+GQAASMGSLLLA+G KGERR+LPN
Sbjct: 82 KPINMYLNSPGGAISAGLAIYDTMQYIRSPVNTICMGQAASMGSLLLAAGAKGERRSLPN 141
Query: 149 STIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTP 208
+TIMIHQPSGGYSGQAKD+ IHTK IVRVWD+LN LY KHTGQS+EVIQ NMDRD FMTP
Sbjct: 142 ATIMIHQPSGGYSGQAKDIAIHTKHIVRVWDSLNELYSKHTGQSVEVIQTNMDRDNFMTP 201
Query: 209 EEAKEFGIIDEVIDQRPMALVTDAVGREGKEGKEGKEKGSN 249
+EAKEFG+IDEVIDQRPMALV+DAV G EGK+KGSN
Sbjct: 202 QEAKEFGLIDEVIDQRPMALVSDAV------GNEGKDKGSN 236
>gi|255647414|gb|ACU24172.1| unknown [Glycine max]
Length = 238
Score = 400 bits (1027), Expect = e-109, Method: Compositional matrix adjust.
Identities = 189/220 (85%), Positives = 204/220 (92%), Gaps = 6/220 (2%)
Query: 30 RSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSK 89
RS+SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPI+DDTAHVVVAQLLFLESEN SK
Sbjct: 25 RSYSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPISDDTAHVVVAQLLFLESENSSK 84
Query: 90 PIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNS 149
PI+MYLNSPGG VTAGLAIYDTMQYIRSP+NTIC+GQAASMGSLLLA+G KGERR+LPN+
Sbjct: 85 PINMYLNSPGGAVTAGLAIYDTMQYIRSPVNTICMGQAASMGSLLLAAGAKGERRSLPNA 144
Query: 150 TIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPE 209
TIMIHQPSGGYSGQAKD+ IHTK IVRVWD+LN LY KHTGQS+EVIQ NMDRD FMTP+
Sbjct: 145 TIMIHQPSGGYSGQAKDIAIHTKHIVRVWDSLNELYAKHTGQSVEVIQTNMDRDNFMTPK 204
Query: 210 EAKEFGIIDEVIDQRPMALVTDAVGREGKEGKEGKEKGSN 249
EAKEFG+IDEVIDQRPMALV+DAV G EGK+KGSN
Sbjct: 205 EAKEFGLIDEVIDQRPMALVSDAV------GNEGKDKGSN 238
>gi|297808311|ref|XP_002872039.1| hypothetical protein ARALYDRAFT_910322 [Arabidopsis lyrata subsp.
lyrata]
gi|297317876|gb|EFH48298.1| hypothetical protein ARALYDRAFT_910322 [Arabidopsis lyrata subsp.
lyrata]
Length = 237
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 185/223 (82%), Positives = 205/223 (91%), Gaps = 2/223 (0%)
Query: 19 QLSKPSAQISA--RSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVV 76
+LS PS+ I+ RS+SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDT+HVVV
Sbjct: 11 RLSAPSSSIATARRSYSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTSHVVV 70
Query: 77 AQLLFLESENPSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLA 136
AQLL+LESENPSKPIHMYLNSPGG VTAGLAIYDTMQYIRSPI+TICLGQAASM SLLLA
Sbjct: 71 AQLLYLESENPSKPIHMYLNSPGGHVTAGLAIYDTMQYIRSPISTICLGQAASMASLLLA 130
Query: 137 SGTKGERRALPNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVI 196
+G KG+RR+LPN+T+MIHQPSGGYSGQAKD+TIHTKQIVRVWDALN LY KHTGQ ++V+
Sbjct: 131 AGAKGQRRSLPNATVMIHQPSGGYSGQAKDITIHTKQIVRVWDALNELYVKHTGQPLDVV 190
Query: 197 QKNMDRDYFMTPEEAKEFGIIDEVIDQRPMALVTDAVGREGKE 239
NMDRD+FMTPEEAK FGIIDEVID+RP+ LV DAVG E K+
Sbjct: 191 ANNMDRDHFMTPEEAKAFGIIDEVIDERPLELVKDAVGNESKD 233
>gi|18420643|ref|NP_568427.1| ATP-dependent Clp protease proteolytic subunit 2 [Arabidopsis
thaliana]
gi|75309225|sp|Q9FN42.1|CLPP2_ARATH RecName: Full=ATP-dependent Clp protease proteolytic subunit 2,
mitochondrial; AltName: Full=Endopeptidase ClpP2;
AltName: Full=nClpP7; Flags: Precursor
gi|9759372|dbj|BAB09831.1| ATP-dependent protease proteolytic subunit ClpP-like protein
[Arabidopsis thaliana]
gi|26452073|dbj|BAC43126.1| putative ATP-dependent protease proteolytic subunit ClpP
[Arabidopsis thaliana]
gi|28950803|gb|AAO63325.1| At5g23140 [Arabidopsis thaliana]
gi|332005743|gb|AED93126.1| ATP-dependent Clp protease proteolytic subunit 2 [Arabidopsis
thaliana]
Length = 241
Score = 396 bits (1017), Expect = e-108, Method: Compositional matrix adjust.
Identities = 186/236 (78%), Positives = 205/236 (86%)
Query: 4 MRNLLSRTSMATKFLQLSKPSAQISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICI 63
MR L+S M + S RS+SLIPMVIEHSSRGERAYDIFSRLLKERIICI
Sbjct: 2 MRGLVSGAKMLSSTPSSMATSIATGRRSYSLIPMVIEHSSRGERAYDIFSRLLKERIICI 61
Query: 64 NGPINDDTAHVVVAQLLFLESENPSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTIC 123
NGPINDDT+HVVVAQLL+LESENPSKPIHMYLNSPGG VTAGLAIYDTMQYIRSPI+TIC
Sbjct: 62 NGPINDDTSHVVVAQLLYLESENPSKPIHMYLNSPGGHVTAGLAIYDTMQYIRSPISTIC 121
Query: 124 LGQAASMGSLLLASGTKGERRALPNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNA 183
LGQAASM SLLLA+G KG+RR+LPN+T+MIHQPSGGYSGQAKD+TIHTKQIVRVWDALN
Sbjct: 122 LGQAASMASLLLAAGAKGQRRSLPNATVMIHQPSGGYSGQAKDITIHTKQIVRVWDALNE 181
Query: 184 LYCKHTGQSIEVIQKNMDRDYFMTPEEAKEFGIIDEVIDQRPMALVTDAVGREGKE 239
LY KHTGQ ++V+ NMDRD+FMTPEEAK FGIIDEVID+RP+ LV DAVG E K+
Sbjct: 182 LYVKHTGQPLDVVANNMDRDHFMTPEEAKAFGIIDEVIDERPLELVKDAVGNESKD 237
>gi|357473939|ref|XP_003607254.1| ATP-dependent Clp protease proteolytic subunit [Medicago
truncatula]
gi|217072528|gb|ACJ84624.1| unknown [Medicago truncatula]
gi|355508309|gb|AES89451.1| ATP-dependent Clp protease proteolytic subunit [Medicago
truncatula]
Length = 238
Score = 395 bits (1016), Expect = e-108, Method: Compositional matrix adjust.
Identities = 188/220 (85%), Positives = 202/220 (91%), Gaps = 6/220 (2%)
Query: 30 RSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSK 89
R++SLIPMVIE SSRGERAYDIFSRLLKERI+CINGPI+DDTAHVVVAQLLFLESENPSK
Sbjct: 25 RAYSLIPMVIETSSRGERAYDIFSRLLKERIVCINGPISDDTAHVVVAQLLFLESENPSK 84
Query: 90 PIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNS 149
PI+MYLNSPGG VTAGLAIYDTMQYIRSPINTICLGQAASMGSLLL +G KG+RRALPN+
Sbjct: 85 PINMYLNSPGGAVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLCAGAKGQRRALPNA 144
Query: 150 TIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPE 209
TIMIHQPSGGYSGQAKD+ IHTKQIVR+WDALN LY KHTGQ ++VIQKNMDRDYFMT E
Sbjct: 145 TIMIHQPSGGYSGQAKDIAIHTKQIVRMWDALNELYVKHTGQPLDVIQKNMDRDYFMTAE 204
Query: 210 EAKEFGIIDEVIDQRPMALVTDAVGREGKEGKEGKEKGSN 249
EAKEFGIIDEVIDQRPM LV+DAV EGK+KGSN
Sbjct: 205 EAKEFGIIDEVIDQRPMTLVSDAV------ADEGKDKGSN 238
>gi|116785036|gb|ABK23566.1| unknown [Picea sitchensis]
Length = 243
Score = 344 bits (882), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 161/215 (74%), Positives = 188/215 (87%)
Query: 20 LSKPSAQISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQL 79
L+ P++ S RS+ LIPMVIE +SRGERAYDIFSRLLKERIICING I DDTA VVVAQL
Sbjct: 19 LNTPTSFHSKRSYGLIPMVIEQTSRGERAYDIFSRLLKERIICINGVIEDDTAAVVVAQL 78
Query: 80 LFLESENPSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGT 139
LFLESENP+KPI++Y+NSPGG VTAGLAIYDTMQYIRSP++T C+GQAASMGSLLLA+G
Sbjct: 79 LFLESENPAKPINLYINSPGGVVTAGLAIYDTMQYIRSPVSTFCMGQAASMGSLLLAAGA 138
Query: 140 KGERRALPNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKN 199
KGERR+LPN+ IMIHQPSGG SGQA D+ I K+I+ D LN+LY KHTGQSI+ I+K
Sbjct: 139 KGERRSLPNARIMIHQPSGGASGQASDIAIQAKEILLTRDRLNSLYAKHTGQSIDKIEKC 198
Query: 200 MDRDYFMTPEEAKEFGIIDEVIDQRPMALVTDAVG 234
M+RD FM+PEEAKEFG++D VI+QRPM+LVTDAVG
Sbjct: 199 MERDMFMSPEEAKEFGLVDTVIEQRPMSLVTDAVG 233
>gi|116793577|gb|ABK26796.1| unknown [Picea sitchensis]
Length = 248
Score = 339 bits (870), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 156/213 (73%), Positives = 187/213 (87%)
Query: 30 RSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSK 89
RS+ LIPMVIEH+SRGERAYDIFSRLLKERIICINGPI D+TA VVVAQLLFLESENP K
Sbjct: 33 RSYGLIPMVIEHTSRGERAYDIFSRLLKERIICINGPIADETASVVVAQLLFLESENPQK 92
Query: 90 PIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNS 149
PI+MY+NSPGG VTAGLAIYDTMQYI+SP+ T+C+GQAASMGSLLLA+G+ GERRALPN+
Sbjct: 93 PINMYINSPGGVVTAGLAIYDTMQYIKSPVTTLCIGQAASMGSLLLAAGSHGERRALPNA 152
Query: 150 TIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPE 209
+MIHQPSGG SGQA D+ IH K+I++ + LN LY KHTGQ+IE I++ M+RD FM+P+
Sbjct: 153 RVMIHQPSGGASGQASDIAIHAKEILKTRERLNGLYAKHTGQTIEKIEQFMERDTFMSPD 212
Query: 210 EAKEFGIIDEVIDQRPMALVTDAVGREGKEGKE 242
EAKEFG+IDEVI+ RP++LVTD+V + K K+
Sbjct: 213 EAKEFGLIDEVIEHRPISLVTDSVTDDKKNNKD 245
>gi|357168023|ref|XP_003581445.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit 2,
mitochondrial-like [Brachypodium distachyon]
Length = 300
Score = 337 bits (863), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 153/220 (69%), Positives = 185/220 (84%)
Query: 17 FLQLSKPSAQISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVV 76
F S P+ + R + L+PMVIEH+SRGERAYDIFSRLLKERI+CI+GPI DDTA +VV
Sbjct: 60 FFSSSPPAGYTARREYGLVPMVIEHTSRGERAYDIFSRLLKERIVCIHGPIADDTASLVV 119
Query: 77 AQLLFLESENPSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLA 136
AQLLFLESENP+KPIH+Y+NSPGG VTAGLAIYDTMQYIRSP+ T+C+GQAASMGSLLLA
Sbjct: 120 AQLLFLESENPAKPIHLYINSPGGVVTAGLAIYDTMQYIRSPVTTLCIGQAASMGSLLLA 179
Query: 137 SGTKGERRALPNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVI 196
+G GERRALPN+ +MIHQPSGG SGQA D+ IH K+I++V D LN +Y KHTGQ+IE I
Sbjct: 180 AGAPGERRALPNARVMIHQPSGGASGQASDIAIHAKEILKVRDRLNKIYAKHTGQAIESI 239
Query: 197 QKNMDRDYFMTPEEAKEFGIIDEVIDQRPMALVTDAVGRE 236
+K M+RD FM P EA +G+IDEVI+ RP++LV+DAV +
Sbjct: 240 EKCMERDMFMDPVEAHSWGLIDEVIEHRPVSLVSDAVASD 279
>gi|226533042|ref|NP_001147355.1| ATP-dependent Clp protease proteolytic subunit [Zea mays]
gi|194700894|gb|ACF84531.1| unknown [Zea mays]
gi|195610476|gb|ACG27068.1| ATP-dependent Clp protease proteolytic subunit [Zea mays]
gi|413918966|gb|AFW58898.1| ATP-dependent Clp protease proteolytic subunit isoform 1 [Zea mays]
gi|413918967|gb|AFW58899.1| ATP-dependent Clp protease proteolytic subunit isoform 2 [Zea mays]
Length = 260
Score = 333 bits (853), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 151/213 (70%), Positives = 184/213 (86%)
Query: 24 SAQISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLE 83
S I R + L+PMVIEH+SRGERAYDIFSRLLKERI+CI+GPI DDTA +VVAQLLFLE
Sbjct: 27 SGYIPRREYGLVPMVIEHTSRGERAYDIFSRLLKERIVCIHGPITDDTASLVVAQLLFLE 86
Query: 84 SENPSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGER 143
SENP+KP+H+Y+NSPGG VTAGLAIYDTMQYIRSP+ T+C+GQAASM SLLLA+G GER
Sbjct: 87 SENPAKPVHLYINSPGGVVTAGLAIYDTMQYIRSPVTTLCIGQAASMASLLLAAGASGER 146
Query: 144 RALPNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRD 203
RALPN+ +MIHQPSGG SGQA D+ IH K+I++V D LN +Y KHTGQ+I+ I++ M+RD
Sbjct: 147 RALPNARVMIHQPSGGASGQASDIAIHAKEILKVRDRLNKIYAKHTGQAIDRIEQCMERD 206
Query: 204 YFMTPEEAKEFGIIDEVIDQRPMALVTDAVGRE 236
FM PEEA E+G+IDEVI+ RP++LV+DAVG +
Sbjct: 207 MFMDPEEAHEWGLIDEVIEHRPVSLVSDAVGSD 239
>gi|224030041|gb|ACN34096.1| unknown [Zea mays]
gi|414586294|tpg|DAA36865.1| TPA: ATP-dependent Clp protease proteolytic subunit [Zea mays]
Length = 259
Score = 332 bits (852), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 148/209 (70%), Positives = 183/209 (87%)
Query: 30 RSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSK 89
R + L+PMVIEH+SRGERAYDIFSRLLKERI+CI+GPI DDTA +VVAQLLFLESENP+K
Sbjct: 32 REYGLVPMVIEHTSRGERAYDIFSRLLKERIVCIHGPITDDTASLVVAQLLFLESENPAK 91
Query: 90 PIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNS 149
P+H+Y+NSPGG VTAGLAIYDTMQYIRSP+ T+C+GQAASM SLLLA+G GERRALPN+
Sbjct: 92 PVHLYINSPGGVVTAGLAIYDTMQYIRSPVTTLCIGQAASMASLLLAAGASGERRALPNA 151
Query: 150 TIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPE 209
+MIHQPSGG SGQA D+ IH K+I++V D LN +Y KHTGQ+I+ I++ M+RD FM PE
Sbjct: 152 RVMIHQPSGGASGQASDIAIHAKEILKVRDRLNKIYAKHTGQAIDRIEQCMERDMFMDPE 211
Query: 210 EAKEFGIIDEVIDQRPMALVTDAVGREGK 238
EA ++G+IDEVI+ RP++LV+DAVG + +
Sbjct: 212 EAHDWGLIDEVIEHRPVSLVSDAVGSDSQ 240
>gi|115459516|ref|NP_001053358.1| Os04g0525600 [Oryza sativa Japonica Group]
gi|113564929|dbj|BAF15272.1| Os04g0525600 [Oryza sativa Japonica Group]
gi|215768496|dbj|BAH00725.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 309
Score = 330 bits (847), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 151/230 (65%), Positives = 190/230 (82%), Gaps = 3/230 (1%)
Query: 23 PSAQISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFL 82
P+ R + L+PMVIEH+SRGERAYDIFSRLLKERI+CI+GPI DDTA +VVAQLLFL
Sbjct: 75 PAGYTQRREYGLVPMVIEHTSRGERAYDIFSRLLKERIVCIHGPITDDTASLVVAQLLFL 134
Query: 83 ESENPSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGE 142
ESENP+KP+H+Y+NSPGG VTAGLAIYDTMQYIRSP+ T+C+GQAASM SLLLA+G +GE
Sbjct: 135 ESENPAKPVHLYINSPGGVVTAGLAIYDTMQYIRSPVTTLCIGQAASMASLLLAAGARGE 194
Query: 143 RRALPNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDR 202
RRALPN+ +MIHQPSGG SGQA D+ IH K+I++V D LN +Y KHT Q+I+ I++ M+R
Sbjct: 195 RRALPNARVMIHQPSGGASGQASDIAIHAKEILKVRDRLNKIYAKHTSQAIDRIEQCMER 254
Query: 203 DYFMTPEEAKEFGIIDEVIDQRPMALVTDAVGREGKE---GKEGKEKGSN 249
D FM PEEA ++G+IDEVI+ RP++LV+DAVG + G +G K ++
Sbjct: 255 DMFMDPEEAHDWGLIDEVIEHRPVSLVSDAVGSDLPNLGGGGDGANKATD 304
>gi|226501814|ref|NP_001150578.1| LOC100284211 [Zea mays]
gi|195640324|gb|ACG39630.1| ATP-dependent Clp protease proteolytic subunit [Zea mays]
Length = 260
Score = 330 bits (846), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 147/209 (70%), Positives = 183/209 (87%)
Query: 30 RSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSK 89
R + L+PMVIEH+SRGERAYDIFSRLLKERI+CI+GPI DDTA +VVAQLLFLESENP+K
Sbjct: 33 REYGLVPMVIEHTSRGERAYDIFSRLLKERIVCIHGPITDDTASLVVAQLLFLESENPAK 92
Query: 90 PIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNS 149
P+H+Y+NSPGG VTAGLAIYDTMQYIRSP+ T+C+GQAASM SLLLA+G G+RRALPN+
Sbjct: 93 PVHLYINSPGGVVTAGLAIYDTMQYIRSPVTTLCIGQAASMASLLLAAGASGQRRALPNA 152
Query: 150 TIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPE 209
+MIHQPSGG SGQA D+ IH K+I++V D LN +Y KHTGQ+I+ I++ M+RD FM PE
Sbjct: 153 RVMIHQPSGGASGQASDIAIHAKEILKVRDRLNKIYAKHTGQAIDRIEQCMERDMFMDPE 212
Query: 210 EAKEFGIIDEVIDQRPMALVTDAVGREGK 238
EA ++G+IDEVI+ RP++LV+DAVG + +
Sbjct: 213 EAHDWGLIDEVIEHRPVSLVSDAVGSDSQ 241
>gi|38344435|emb|CAE05641.2| OSJNBa0038O10.7 [Oryza sativa Japonica Group]
gi|116310954|emb|CAH67891.1| OSIGBa0153E02-OSIGBa0093I20.20 [Oryza sativa Indica Group]
gi|125549084|gb|EAY94906.1| hypothetical protein OsI_16707 [Oryza sativa Indica Group]
Length = 259
Score = 330 bits (845), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 151/230 (65%), Positives = 190/230 (82%), Gaps = 3/230 (1%)
Query: 23 PSAQISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFL 82
P+ R + L+PMVIEH+SRGERAYDIFSRLLKERI+CI+GPI DDTA +VVAQLLFL
Sbjct: 25 PAGYTQRREYGLVPMVIEHTSRGERAYDIFSRLLKERIVCIHGPITDDTASLVVAQLLFL 84
Query: 83 ESENPSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGE 142
ESENP+KP+H+Y+NSPGG VTAGLAIYDTMQYIRSP+ T+C+GQAASM SLLLA+G +GE
Sbjct: 85 ESENPAKPVHLYINSPGGVVTAGLAIYDTMQYIRSPVTTLCIGQAASMASLLLAAGARGE 144
Query: 143 RRALPNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDR 202
RRALPN+ +MIHQPSGG SGQA D+ IH K+I++V D LN +Y KHT Q+I+ I++ M+R
Sbjct: 145 RRALPNARVMIHQPSGGASGQASDIAIHAKEILKVRDRLNKIYAKHTSQAIDRIEQCMER 204
Query: 203 DYFMTPEEAKEFGIIDEVIDQRPMALVTDAVGREGKE---GKEGKEKGSN 249
D FM PEEA ++G+IDEVI+ RP++LV+DAVG + G +G K ++
Sbjct: 205 DMFMDPEEAHDWGLIDEVIEHRPVSLVSDAVGSDLPNLGGGGDGANKATD 254
>gi|326519674|dbj|BAK00210.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 256
Score = 326 bits (836), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 151/230 (65%), Positives = 185/230 (80%)
Query: 4 MRNLLSRTSMATKFLQLSKPSAQISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICI 63
M L+ + F S + R + L+PMVIEH+SRGERAYDIFSRLLKERI+CI
Sbjct: 1 MLRRLASAAAPRAFFSPSPAAGHAPRREYGLVPMVIEHTSRGERAYDIFSRLLKERIVCI 60
Query: 64 NGPINDDTAHVVVAQLLFLESENPSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTIC 123
+GPI DDTA +VVAQLLFLESENP+KPIH+Y+NSPGG VTAGLAIYDTMQYIRSP+ T+C
Sbjct: 61 HGPIADDTASLVVAQLLFLESENPAKPIHLYINSPGGVVTAGLAIYDTMQYIRSPVTTLC 120
Query: 124 LGQAASMGSLLLASGTKGERRALPNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNA 183
+GQAASMGSLLLA+G GERRALPN+ +MIHQPSGG SGQA D+ I K+I++V D LN
Sbjct: 121 IGQAASMGSLLLAAGAPGERRALPNARVMIHQPSGGASGQASDIAIQAKEILKVRDRLNK 180
Query: 184 LYCKHTGQSIEVIQKNMDRDYFMTPEEAKEFGIIDEVIDQRPMALVTDAV 233
+Y KHTGQ+I+ I++ M+RD FM P EA +G+IDEVI+ RP++LV+DAV
Sbjct: 181 IYAKHTGQAIDRIEQCMERDMFMDPVEAHAWGLIDEVIEHRPISLVSDAV 230
>gi|302817596|ref|XP_002990473.1| hypothetical protein SELMODRAFT_131898 [Selaginella moellendorffii]
gi|300141641|gb|EFJ08350.1| hypothetical protein SELMODRAFT_131898 [Selaginella moellendorffii]
Length = 253
Score = 322 bits (826), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 147/205 (71%), Positives = 179/205 (87%)
Query: 30 RSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSK 89
R + LIPMVIEH++RGERAYDIFSRLLKERI+CI+GPI DDTA +VVAQLL+LESENP K
Sbjct: 25 RLYGLIPMVIEHTARGERAYDIFSRLLKERIVCIHGPIADDTASLVVAQLLYLESENPLK 84
Query: 90 PIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNS 149
PIH+Y+NSPGG VTAGLAIYDTMQYIRSP++T+C+GQAASMGSLLLA+G G+RR+LPN+
Sbjct: 85 PIHLYINSPGGVVTAGLAIYDTMQYIRSPVSTLCVGQAASMGSLLLAAGEPGQRRSLPNA 144
Query: 150 TIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPE 209
+M+HQPSGG SGQA D+ I ++I+ + LN LY KHTG SIE I ++M+RD+FM+PE
Sbjct: 145 RVMVHQPSGGASGQASDIAIQAREILDMRSRLNKLYAKHTGSSIEKIDQSMERDHFMSPE 204
Query: 210 EAKEFGIIDEVIDQRPMALVTDAVG 234
EAKEFG+IDEVI QRP +LV D+VG
Sbjct: 205 EAKEFGLIDEVIVQRPESLVADSVG 229
>gi|302804055|ref|XP_002983780.1| hypothetical protein SELMODRAFT_48156 [Selaginella moellendorffii]
gi|300148617|gb|EFJ15276.1| hypothetical protein SELMODRAFT_48156 [Selaginella moellendorffii]
Length = 206
Score = 322 bits (826), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 147/205 (71%), Positives = 179/205 (87%)
Query: 30 RSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSK 89
R + LIPMVIEH++RGERAYDIFSRLLKERI+CI+GPI DDTA +VVAQLL+LESENP K
Sbjct: 2 RLYGLIPMVIEHTARGERAYDIFSRLLKERIVCIHGPIADDTASLVVAQLLYLESENPLK 61
Query: 90 PIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNS 149
PIH+Y+NSPGG VTAGLAIYDTMQYIRSP++T+C+GQAASMGSLLLA+G G+RR+LPN+
Sbjct: 62 PIHLYINSPGGVVTAGLAIYDTMQYIRSPVSTLCVGQAASMGSLLLAAGEPGQRRSLPNA 121
Query: 150 TIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPE 209
+M+HQPSGG SGQA D+ I ++I+ + LN LY KHTG SIE I ++M+RD+FM+PE
Sbjct: 122 RVMVHQPSGGASGQASDIAIQAREILDMRSRLNKLYAKHTGSSIEKIDQSMERDHFMSPE 181
Query: 210 EAKEFGIIDEVIDQRPMALVTDAVG 234
EAKEFG+IDEVI QRP +LV D+VG
Sbjct: 182 EAKEFGLIDEVIVQRPESLVADSVG 206
>gi|125591043|gb|EAZ31393.1| hypothetical protein OsJ_15521 [Oryza sativa Japonica Group]
Length = 221
Score = 320 bits (819), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 144/200 (72%), Positives = 177/200 (88%)
Query: 37 MVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHMYLN 96
MVIEH+SRGERAYDIFSRLLKERI+CI+GPI DDTA +VVAQLLFLESENP+KP+H+Y+N
Sbjct: 1 MVIEHTSRGERAYDIFSRLLKERIVCIHGPITDDTASLVVAQLLFLESENPAKPVHLYIN 60
Query: 97 SPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMIHQP 156
SPGG VTAGLAIYDTMQYIRSP+ T+C+GQAASM SLLLA+G +GERRALPN+ +MIHQP
Sbjct: 61 SPGGVVTAGLAIYDTMQYIRSPVTTLCIGQAASMASLLLAAGARGERRALPNARVMIHQP 120
Query: 157 SGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKEFGI 216
SGG SGQA D+ IH K+I++V D LN +Y KHT Q+I+ I++ M+RD FM PEEA ++G+
Sbjct: 121 SGGASGQASDIAIHAKEILKVRDRLNKIYAKHTSQAIDRIEQCMERDMFMDPEEAHDWGL 180
Query: 217 IDEVIDQRPMALVTDAVGRE 236
IDEVI+ RP++LV+DAVG +
Sbjct: 181 IDEVIEHRPVSLVSDAVGSD 200
>gi|326502578|dbj|BAJ95352.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326506866|dbj|BAJ91474.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 300
Score = 315 bits (808), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 144/224 (64%), Positives = 182/224 (81%)
Query: 10 RTSMATKFLQLSKPSAQISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPIND 69
R ++ Q +P S R + L+PMV+E +SRGERAYDIFSRLLKERI+CI+GPI D
Sbjct: 48 RAFFSSAPYQPPEPEGYSSVREYGLVPMVVETTSRGERAYDIFSRLLKERIVCIHGPIAD 107
Query: 70 DTAHVVVAQLLFLESENPSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAAS 129
+TA +VVAQLLFLESENP KPI +Y+NSPGG VTAGLAIYDTMQYIR P+NTIC+GQAAS
Sbjct: 108 ETASLVVAQLLFLESENPLKPISLYINSPGGVVTAGLAIYDTMQYIRCPVNTICIGQAAS 167
Query: 130 MGSLLLASGTKGERRALPNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHT 189
MGSLLLA+G +GERRALPN+ +MIHQPSGG GQA D+ I K+I+++ D LN +Y KHT
Sbjct: 168 MGSLLLAAGARGERRALPNARVMIHQPSGGAQGQATDIAIQAKEILKLRDRLNKIYAKHT 227
Query: 190 GQSIEVIQKNMDRDYFMTPEEAKEFGIIDEVIDQRPMALVTDAV 233
GQ+I+ I++ M+RD FM PEEA+E+G+IDEVI+ RP +L+ + +
Sbjct: 228 GQNIDKIEQCMERDLFMDPEEAREWGLIDEVIENRPASLMPEGL 271
>gi|326492708|dbj|BAJ90210.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 285
Score = 314 bits (805), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 143/215 (66%), Positives = 179/215 (83%)
Query: 19 QLSKPSAQISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQ 78
Q +P S R + L+PMV+E +SRGERAYDIFSRLLKERI+CI+GPI D+TA +VVAQ
Sbjct: 42 QPPEPEGYSSVREYGLVPMVVETTSRGERAYDIFSRLLKERIVCIHGPIADETASLVVAQ 101
Query: 79 LLFLESENPSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASG 138
LLFLESENP KPI +Y+NSPGG VTAGLAIYDTMQYIR P+NTIC+GQAASMGSLLLA+G
Sbjct: 102 LLFLESENPLKPISLYINSPGGVVTAGLAIYDTMQYIRCPVNTICIGQAASMGSLLLAAG 161
Query: 139 TKGERRALPNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQK 198
+GERRALPN+ +MIHQPSGG GQA D+ I K+I+++ D LN +Y KHTGQ+I+ I++
Sbjct: 162 ARGERRALPNARVMIHQPSGGAQGQATDIAIQAKEILKLRDRLNKIYAKHTGQNIDKIEQ 221
Query: 199 NMDRDYFMTPEEAKEFGIIDEVIDQRPMALVTDAV 233
M+RD FM PEEA+E+G+IDEVI+ RP +L+ + +
Sbjct: 222 CMERDLFMDPEEAREWGLIDEVIENRPASLMPEGL 256
>gi|357150338|ref|XP_003575425.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit 2,
mitochondrial-like [Brachypodium distachyon]
Length = 302
Score = 313 bits (803), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 143/215 (66%), Positives = 180/215 (83%)
Query: 19 QLSKPSAQISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQ 78
Q +P+ SA + L+PMV+E +SRGERAYDIFSRLLKERI+CI+GPI D+TA +VVAQ
Sbjct: 63 QQPEPAGYSSALEYGLVPMVVETTSRGERAYDIFSRLLKERIVCIHGPIADETASLVVAQ 122
Query: 79 LLFLESENPSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASG 138
LLFLESENP KPI +Y+NSPGG VTAGLAIYDTMQYIR P+NTIC+GQAASMGSLLLA+G
Sbjct: 123 LLFLESENPLKPISLYINSPGGVVTAGLAIYDTMQYIRCPVNTICIGQAASMGSLLLAAG 182
Query: 139 TKGERRALPNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQK 198
+GERRALPN+ +MIHQPSGG GQA D+ I K+I+++ D LN +Y KHTGQ+I+ I++
Sbjct: 183 ARGERRALPNARVMIHQPSGGAQGQATDIAIQAKEILKLRDRLNKIYAKHTGQNIDKIEQ 242
Query: 199 NMDRDYFMTPEEAKEFGIIDEVIDQRPMALVTDAV 233
M+RD FM PEEA+E+G+IDEVI+ RP +L+ + +
Sbjct: 243 CMERDLFMDPEEAREWGLIDEVIENRPASLMPEGL 277
>gi|242062408|ref|XP_002452493.1| hypothetical protein SORBIDRAFT_04g026880 [Sorghum bicolor]
gi|241932324|gb|EES05469.1| hypothetical protein SORBIDRAFT_04g026880 [Sorghum bicolor]
Length = 309
Score = 308 bits (790), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 140/205 (68%), Positives = 173/205 (84%)
Query: 30 RSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSK 89
R + L+PMVIE +SRGERAYDIFSRLLKERI+CI+GPI DDTA +VVAQLLFLESENP K
Sbjct: 80 REYGLVPMVIETTSRGERAYDIFSRLLKERIVCIHGPIADDTASLVVAQLLFLESENPLK 139
Query: 90 PIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNS 149
P+H+Y+NSPGG VTAGLAIYDTMQYIR P+ T+C+GQAASMGSLLLA+G GERRALPN+
Sbjct: 140 PVHLYINSPGGVVTAGLAIYDTMQYIRCPVTTLCIGQAASMGSLLLAAGAPGERRALPNA 199
Query: 150 TIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPE 209
+MIHQPSGG GQA D+ I K+I+++ D LN +Y KHT Q I+ I++ M+RD FM PE
Sbjct: 200 RVMIHQPSGGAQGQATDIAIQAKEILKMRDRLNKIYQKHTRQPIDKIEQCMERDLFMDPE 259
Query: 210 EAKEFGIIDEVIDQRPMALVTDAVG 234
EA+++G+IDEVI+ RP +L+ D +G
Sbjct: 260 EARDWGLIDEVIENRPASLMPDGIG 284
>gi|226491764|ref|NP_001150643.1| ATP-dependent Clp protease proteolytic subunit [Zea mays]
gi|195640820|gb|ACG39878.1| ATP-dependent Clp protease proteolytic subunit [Zea mays]
gi|413937908|gb|AFW72459.1| ATP-dependent Clp protease proteolytic subunit [Zea mays]
Length = 302
Score = 308 bits (790), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 142/225 (63%), Positives = 178/225 (79%)
Query: 10 RTSMATKFLQLSKPSAQISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPIND 69
R ++ Q +P R + L+PMVIE +SRGERAYDIFSRLLKERI+CI+GPI D
Sbjct: 53 RAFFSSSPYQPPQPEGFSQHREYGLVPMVIETTSRGERAYDIFSRLLKERIVCIHGPIAD 112
Query: 70 DTAHVVVAQLLFLESENPSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAAS 129
DTA +VVAQLLFLESENP KP+H+Y+NSPGG VTAGLAIYDTMQYIR P+ T+C+GQAAS
Sbjct: 113 DTASLVVAQLLFLESENPLKPVHLYINSPGGVVTAGLAIYDTMQYIRCPVTTLCIGQAAS 172
Query: 130 MGSLLLASGTKGERRALPNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHT 189
MGSLLLA+G GERRALPN+ +MIHQPSGG GQA D+ I K+I+++ D LN +Y KHT
Sbjct: 173 MGSLLLAAGAPGERRALPNARVMIHQPSGGAQGQATDIAIQAKEILKMRDRLNKIYQKHT 232
Query: 190 GQSIEVIQKNMDRDYFMTPEEAKEFGIIDEVIDQRPMALVTDAVG 234
Q I+ I++ M+RD FM PEEA+++G+IDEVI+ RP + + D +G
Sbjct: 233 RQPIDKIEQCMERDLFMDPEEARDWGLIDEVIENRPASFMPDGIG 277
>gi|195645066|gb|ACG42001.1| ATP-dependent Clp protease proteolytic subunit [Zea mays]
Length = 302
Score = 308 bits (790), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 142/225 (63%), Positives = 178/225 (79%)
Query: 10 RTSMATKFLQLSKPSAQISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPIND 69
R ++ Q +P R + L+PMVIE +SRGERAYDIFSRLLKERI+CI+GPI D
Sbjct: 53 RAFFSSSPYQPPQPEGFSQHREYGLVPMVIETTSRGERAYDIFSRLLKERIVCIHGPIAD 112
Query: 70 DTAHVVVAQLLFLESENPSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAAS 129
DTA +VVAQLLFLESENP KP+H+Y+NSPGG VTAGLAIYDTMQYIR P+ T+C+GQAAS
Sbjct: 113 DTASLVVAQLLFLESENPLKPVHLYINSPGGVVTAGLAIYDTMQYIRCPVTTLCIGQAAS 172
Query: 130 MGSLLLASGTKGERRALPNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHT 189
MGSLLLA+G GERRALPN+ +MIHQPSGG GQA D+ I K+I+++ D LN +Y KHT
Sbjct: 173 MGSLLLAAGAPGERRALPNARVMIHQPSGGAQGQATDIAIQAKEILKMRDRLNKIYQKHT 232
Query: 190 GQSIEVIQKNMDRDYFMTPEEAKEFGIIDEVIDQRPMALVTDAVG 234
Q I+ I++ M+RD FM PEEA+++G+IDEVI+ RP + + D +G
Sbjct: 233 RQPIDKIEQCMERDLFMDPEEARDWGLIDEVIENRPASFMPDVIG 277
>gi|413923166|gb|AFW63098.1| ATP-dependent Clp protease proteolytic subunit [Zea mays]
Length = 395
Score = 308 bits (788), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 141/215 (65%), Positives = 175/215 (81%)
Query: 19 QLSKPSAQISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQ 78
Q +P R + L+PMVIE +SRGERAYDIFSRLLKERI+CINGPI DDTA +VVAQ
Sbjct: 153 QPPQPEGFSPHREYGLVPMVIETTSRGERAYDIFSRLLKERIVCINGPIADDTASLVVAQ 212
Query: 79 LLFLESENPSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASG 138
LLFLESENP KP+H+Y+NSPGG VTAGLAIYDTMQYIR P+ T+C+GQAASMGSLLLA+G
Sbjct: 213 LLFLESENPLKPVHLYINSPGGVVTAGLAIYDTMQYIRCPVTTLCIGQAASMGSLLLAAG 272
Query: 139 TKGERRALPNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQK 198
GERRALPN+ +MIHQPSGG GQA D+ I K+I+++ D LN +Y KHT Q I+ I++
Sbjct: 273 APGERRALPNARVMIHQPSGGAQGQATDIAIQAKEILKLRDRLNKIYQKHTRQPIDKIEQ 332
Query: 199 NMDRDYFMTPEEAKEFGIIDEVIDQRPMALVTDAV 233
M+RD FM P+EA+++G+IDEVI+ RP +L+ D +
Sbjct: 333 CMERDLFMDPDEARDWGLIDEVIENRPASLMPDGI 367
>gi|226529931|ref|NP_001141255.1| uncharacterized protein LOC100273342 [Zea mays]
gi|194703568|gb|ACF85868.1| unknown [Zea mays]
Length = 304
Score = 308 bits (788), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 141/215 (65%), Positives = 175/215 (81%)
Query: 19 QLSKPSAQISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQ 78
Q +P R + L+PMVIE +SRGERAYDIFSRLLKERI+CINGPI DDTA +VVAQ
Sbjct: 62 QPPQPEGFSPHREYGLVPMVIETTSRGERAYDIFSRLLKERIVCINGPIADDTASLVVAQ 121
Query: 79 LLFLESENPSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASG 138
LLFLESENP KP+H+Y+NSPGG VTAGLAIYDTMQYIR P+ T+C+GQAASMGSLLLA+G
Sbjct: 122 LLFLESENPLKPVHLYINSPGGVVTAGLAIYDTMQYIRCPVTTLCIGQAASMGSLLLAAG 181
Query: 139 TKGERRALPNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQK 198
GERRALPN+ +MIHQPSGG GQA D+ I K+I+++ D LN +Y KHT Q I+ I++
Sbjct: 182 APGERRALPNARVMIHQPSGGAQGQATDIAIQAKEILKLRDRLNKIYQKHTRQPIDKIEQ 241
Query: 199 NMDRDYFMTPEEAKEFGIIDEVIDQRPMALVTDAV 233
M+RD FM P+EA+++G+IDEVI+ RP +L+ D +
Sbjct: 242 CMERDLFMDPDEARDWGLIDEVIENRPASLMPDGI 276
>gi|219885303|gb|ACL53026.1| unknown [Zea mays]
Length = 302
Score = 306 bits (784), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 141/225 (62%), Positives = 177/225 (78%)
Query: 10 RTSMATKFLQLSKPSAQISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPIND 69
R ++ Q +P R + L+PMVIE +SRGERAYDI SRLLKERI+CI+GPI D
Sbjct: 53 RAFFSSSPYQPPQPEGFSQHREYGLVPMVIETTSRGERAYDILSRLLKERIVCIHGPIAD 112
Query: 70 DTAHVVVAQLLFLESENPSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAAS 129
DTA +VVAQLLFLESENP KP+H+Y+NSPGG VTAGLAIYDTMQYIR P+ T+C+GQAAS
Sbjct: 113 DTASLVVAQLLFLESENPLKPVHLYINSPGGVVTAGLAIYDTMQYIRCPVTTLCIGQAAS 172
Query: 130 MGSLLLASGTKGERRALPNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHT 189
MGSLLLA+G GERRALPN+ +MIHQPSGG GQA D+ I K+I+++ D LN +Y KHT
Sbjct: 173 MGSLLLAAGAPGERRALPNARVMIHQPSGGAQGQATDIAIQAKEILKMRDRLNKIYQKHT 232
Query: 190 GQSIEVIQKNMDRDYFMTPEEAKEFGIIDEVIDQRPMALVTDAVG 234
Q I+ I++ M+RD FM PEEA+++G+IDEVI+ RP + + D +G
Sbjct: 233 RQPIDKIEQCMERDLFMDPEEARDWGLIDEVIENRPASFMPDGIG 277
>gi|115447465|ref|NP_001047512.1| Os02g0634500 [Oryza sativa Japonica Group]
gi|49388184|dbj|BAD25310.1| unknown protein [Oryza sativa Japonica Group]
gi|113537043|dbj|BAF09426.1| Os02g0634500 [Oryza sativa Japonica Group]
gi|215692767|dbj|BAG88235.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 298
Score = 305 bits (782), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 138/204 (67%), Positives = 174/204 (85%)
Query: 28 SARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENP 87
S ++F L+PMVIE +SRGERAYDIFSRLLKERI+ I+GPI D+TA +VVAQLLFLESENP
Sbjct: 67 SHQAFGLVPMVIETTSRGERAYDIFSRLLKERIVLIHGPIADETASLVVAQLLFLESENP 126
Query: 88 SKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALP 147
KP+H+Y+NSPGG VTAGLAIYDTMQYIR P+ T+C+GQAASMGSLLLA+G +GERRALP
Sbjct: 127 LKPVHLYINSPGGVVTAGLAIYDTMQYIRCPVTTLCIGQAASMGSLLLAAGARGERRALP 186
Query: 148 NSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMT 207
N+ +MIHQPSGG GQA D+ I K+I+++ D LN +Y KHTGQ I+ I++ M+RD FM
Sbjct: 187 NARVMIHQPSGGAQGQATDIAIQAKEILKLRDRLNKIYQKHTGQEIDKIEQCMERDLFMD 246
Query: 208 PEEAKEFGIIDEVIDQRPMALVTD 231
PEEA+++G+IDEVI+ RP +L+ +
Sbjct: 247 PEEARDWGLIDEVIENRPASLIPE 270
>gi|168031792|ref|XP_001768404.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680329|gb|EDQ66766.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 201
Score = 305 bits (782), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 138/197 (70%), Positives = 173/197 (87%)
Query: 37 MVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHMYLN 96
MVIEH+SRGERAYDIFSRLLKERI+CI+GPI+DDTA +VVAQLL+LESE+P KPIH+Y+N
Sbjct: 1 MVIEHTSRGERAYDIFSRLLKERIVCIHGPISDDTASLVVAQLLYLESEHPDKPIHLYIN 60
Query: 97 SPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMIHQP 156
SPGG VTAGLAIYDTMQYIRSP++T+C+GQAASMGSLLLA+G GERR+LPN+ +MIHQP
Sbjct: 61 SPGGVVTAGLAIYDTMQYIRSPVSTLCVGQAASMGSLLLAAGQPGERRSLPNARVMIHQP 120
Query: 157 SGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKEFGI 216
SGG SGQA D+ I ++I+ + L+ LY KHTG + E I+ +M+RD+FM+PEEAK+FG+
Sbjct: 121 SGGASGQASDIAIQAREILDMRARLSRLYVKHTGHTYEKIESSMERDHFMSPEEAKQFGL 180
Query: 217 IDEVIDQRPMALVTDAV 233
+DEVI++RP LV D+V
Sbjct: 181 VDEVIERRPENLVADSV 197
>gi|125582984|gb|EAZ23915.1| hypothetical protein OsJ_07636 [Oryza sativa Japonica Group]
Length = 318
Score = 305 bits (782), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 138/204 (67%), Positives = 174/204 (85%)
Query: 28 SARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENP 87
S ++F L+PMVIE +SRGERAYDIFSRLLKERI+ I+GPI D+TA +VVAQLLFLESENP
Sbjct: 67 SHQAFGLVPMVIETTSRGERAYDIFSRLLKERIVLIHGPIADETASLVVAQLLFLESENP 126
Query: 88 SKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALP 147
KP+H+Y+NSPGG VTAGLAIYDTMQYIR P+ T+C+GQAASMGSLLLA+G +GERRALP
Sbjct: 127 LKPVHLYINSPGGVVTAGLAIYDTMQYIRCPVTTLCIGQAASMGSLLLAAGARGERRALP 186
Query: 148 NSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMT 207
N+ +MIHQPSGG GQA D+ I K+I+++ D LN +Y KHTGQ I+ I++ M+RD FM
Sbjct: 187 NARVMIHQPSGGAQGQATDIAIQAKEILKLRDRLNKIYQKHTGQEIDKIEQCMERDLFMD 246
Query: 208 PEEAKEFGIIDEVIDQRPMALVTD 231
PEEA+++G+IDEVI+ RP +L+ +
Sbjct: 247 PEEARDWGLIDEVIENRPASLIPE 270
>gi|125540417|gb|EAY86812.1| hypothetical protein OsI_08189 [Oryza sativa Indica Group]
Length = 318
Score = 305 bits (782), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 138/204 (67%), Positives = 174/204 (85%)
Query: 28 SARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENP 87
S ++F L+PMVIE +SRGERAYDIFSRLLKERI+ I+GPI D+TA +VVAQLLFLESENP
Sbjct: 67 SHQAFGLVPMVIETTSRGERAYDIFSRLLKERIVLIHGPIADETASLVVAQLLFLESENP 126
Query: 88 SKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALP 147
KP+H+Y+NSPGG VTAGLAIYDTMQYIR P+ T+C+GQAASMGSLLLA+G +GERRALP
Sbjct: 127 LKPVHLYINSPGGVVTAGLAIYDTMQYIRCPVTTLCIGQAASMGSLLLAAGARGERRALP 186
Query: 148 NSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMT 207
N+ +MIHQPSGG GQA D+ I K+I+++ D LN +Y KHTGQ I+ I++ M+RD FM
Sbjct: 187 NARVMIHQPSGGAQGQATDIAIQAKEILKLRDRLNKIYQKHTGQEIDKIEQCMERDLFMD 246
Query: 208 PEEAKEFGIIDEVIDQRPMALVTD 231
PEEA+++G+IDEVI+ RP +L+ +
Sbjct: 247 PEEARDWGLIDEVIENRPASLIPE 270
>gi|384248981|gb|EIE22464.1| ATP-dependent Clp protease proteolytic subunit [Coccomyxa
subellipsoidea C-169]
Length = 202
Score = 283 bits (725), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 125/197 (63%), Positives = 168/197 (85%)
Query: 30 RSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSK 89
R++SLIPMVIEH+ RGER++DI+SRLL+ERI+ +NG I+D +++++AQLL+LESENP +
Sbjct: 2 RNYSLIPMVIEHTPRGERSFDIYSRLLRERIVMVNGGIDDHMSNLIIAQLLYLESENPEQ 61
Query: 90 PIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNS 149
PI MY+NS GG VT+GLAIYDTMQYIR+PI+T+C+GQAASM SLLLA+G KG RR+LPNS
Sbjct: 62 PISMYINSQGGVVTSGLAIYDTMQYIRNPISTLCVGQAASMASLLLAAGEKGHRRSLPNS 121
Query: 150 TIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPE 209
IM+HQPSGG+ GQA D+ IH ++I R+ LN +Y KHTGQS E+I++ +DRD F + +
Sbjct: 122 RIMLHQPSGGFQGQASDIRIHAEEIARLSKRLNKIYAKHTGQSEELIEETLDRDRFQSAD 181
Query: 210 EAKEFGIIDEVIDQRPM 226
EA++FG+IDEVI+ RP+
Sbjct: 182 EAQQFGLIDEVIETRPV 198
>gi|451940540|ref|YP_007461178.1| ATP-dependent Clp protease proteolytic subunit ClpP [Bartonella
australis Aust/NH1]
gi|451899927|gb|AGF74390.1| ATP-dependent Clp protease proteolytic subunit ClpP [Bartonella
australis Aust/NH1]
Length = 209
Score = 281 bits (719), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 124/194 (63%), Positives = 160/194 (82%)
Query: 31 SFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKP 90
+ SL+PMV+E ++RGERAYDIFSRLLKERII INGP+ D A +V AQLLFLE+ENP K
Sbjct: 8 ALSLVPMVVEQTNRGERAYDIFSRLLKERIIFINGPVEDGMAMLVCAQLLFLEAENPKKA 67
Query: 91 IHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNST 150
I +Y+NSPGG VT+G+AIYDTMQ+IR P++T+C+GQAASMGSLLLA+G KG R ALPN+
Sbjct: 68 ISLYINSPGGVVTSGMAIYDTMQFIRPPVSTLCMGQAASMGSLLLAAGAKGHRFALPNAR 127
Query: 151 IMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEE 210
+M+HQPSGG+ GQA D+ H + I+++ LN +Y +HTGQS E+I+K +DRD+FMT EE
Sbjct: 128 VMVHQPSGGFQGQASDIERHARDIIQMKQRLNQIYVQHTGQSYEIIEKTLDRDHFMTAEE 187
Query: 211 AKEFGIIDEVIDQR 224
AK+FG++D VI R
Sbjct: 188 AKQFGLVDNVIQYR 201
>gi|255642366|gb|ACU21447.1| unknown [Glycine max]
Length = 175
Score = 279 bits (714), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 130/148 (87%), Positives = 143/148 (96%)
Query: 29 ARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPS 88
+RS+SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPI+DDTAHVVVAQ LFLESENPS
Sbjct: 22 SRSYSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPISDDTAHVVVAQPLFLESENPS 81
Query: 89 KPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPN 148
KPI+MYLNSPGG ++AGLAIYDTMQYIRSP++TIC+GQAASMGSLLLA+G KGERR+LPN
Sbjct: 82 KPINMYLNSPGGAISAGLAIYDTMQYIRSPVSTICMGQAASMGSLLLAAGAKGERRSLPN 141
Query: 149 STIMIHQPSGGYSGQAKDMTIHTKQIVR 176
+TIMIHQPSGGYSGQAKD+ IHTK IVR
Sbjct: 142 ATIMIHQPSGGYSGQAKDIAIHTKHIVR 169
>gi|395766799|ref|ZP_10447337.1| ATP-dependent Clp protease proteolytic subunit [Bartonella doshiae
NCTC 12862]
gi|395415411|gb|EJF81845.1| ATP-dependent Clp protease proteolytic subunit [Bartonella doshiae
NCTC 12862]
Length = 210
Score = 279 bits (713), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 123/200 (61%), Positives = 162/200 (81%)
Query: 25 AQISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLES 84
+ ++ + SL+PMVIE ++RGERAYDIFSRLLKERII INGP+ D A +V AQLLFLE+
Sbjct: 2 SNLTKTALSLVPMVIEQTNRGERAYDIFSRLLKERIIFINGPVEDGMAMLVCAQLLFLEA 61
Query: 85 ENPSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERR 144
ENP K I +Y+NSPGG VT+G+AIYDTMQ+IRSP++T+C+GQAASMGSLLL +G KG R
Sbjct: 62 ENPKKEISLYINSPGGVVTSGMAIYDTMQFIRSPVSTLCMGQAASMGSLLLTAGAKGHRF 121
Query: 145 ALPNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDY 204
LPN+ IM+HQPSGG+ GQA D+ H + I+++ LN +Y +HTGQ ++I+K +DRD+
Sbjct: 122 TLPNARIMVHQPSGGFQGQASDIERHAQDIIKMKRRLNEIYVQHTGQDYDIIEKTLDRDH 181
Query: 205 FMTPEEAKEFGIIDEVIDQR 224
FMT EEAK+FG++D+VI R
Sbjct: 182 FMTAEEAKQFGLVDDVIQYR 201
>gi|451941812|ref|YP_007462449.1| ATP-dependent Clp protease proteolytic subunit ClpP [Bartonella
vinsonii subsp. berkhoffii str. Winnie]
gi|451901199|gb|AGF75661.1| ATP-dependent Clp protease proteolytic subunit ClpP [Bartonella
vinsonii subsp. berkhoffii str. Winnie]
Length = 206
Score = 278 bits (711), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 123/194 (63%), Positives = 159/194 (81%)
Query: 31 SFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKP 90
+ SL+PMVIE ++RGERAYDIFSRLLKERII INGP+ D+ A +V AQLLFLE+ENP K
Sbjct: 4 ALSLVPMVIEQTNRGERAYDIFSRLLKERIIFINGPVEDNMAMLVCAQLLFLEAENPKKE 63
Query: 91 IHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNST 150
I +Y+NSPGG VT+G+AIYDTMQ+IR P++T+C+GQAASMGSLLL +G KG R LPN+
Sbjct: 64 ISLYINSPGGVVTSGMAIYDTMQFIRPPVSTLCMGQAASMGSLLLTAGAKGHRFTLPNAR 123
Query: 151 IMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEE 210
IM+HQPSGG+ GQA D+ H + I+++ LN +Y +HTGQ EVI++ +DRD+FMT EE
Sbjct: 124 IMVHQPSGGFQGQASDIERHAQDIIKMKRRLNEIYVQHTGQDYEVIERTLDRDHFMTAEE 183
Query: 211 AKEFGIIDEVIDQR 224
AK+FG++D+VI R
Sbjct: 184 AKQFGLVDDVIQYR 197
>gi|145341425|ref|XP_001415810.1| mitochondrial Clp protease, subunit of ClpP peptidase complex
[Ostreococcus lucimarinus CCE9901]
gi|144576033|gb|ABO94102.1| mitochondrial Clp protease, subunit of ClpP peptidase complex
[Ostreococcus lucimarinus CCE9901]
Length = 232
Score = 278 bits (711), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 129/221 (58%), Positives = 172/221 (77%), Gaps = 8/221 (3%)
Query: 5 RNLLSRTSMATKFLQLSKPSAQISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICIN 64
R L+SRTS S PS R+++L+PMV+E ++RGER +DI+SRLLKERI+ +N
Sbjct: 11 RALISRTS--------SHPSRIAHPRTYALVPMVLEQTNRGERVFDIYSRLLKERIVFVN 62
Query: 65 GPINDDTAHVVVAQLLFLESENPSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICL 124
GPI+D+ + + VAQLLFLES +P++PI MY+NSPGG VTAGL IYDTMQY+ PI+T+C+
Sbjct: 63 GPIDDNVSSLTVAQLLFLESVSPTQPIWMYINSPGGSVTAGLGIYDTMQYVSPPIHTLCV 122
Query: 125 GQAASMGSLLLASGTKGERRALPNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNAL 184
GQA+SMGSLLLA+G G+RR+LP+S +M+HQPSGG SGQA D+ IH ++I+ V L +
Sbjct: 123 GQASSMGSLLLAAGEPGQRRSLPHSRVMLHQPSGGASGQASDIAIHAQEILNVRQKLVQI 182
Query: 185 YCKHTGQSIEVIQKNMDRDYFMTPEEAKEFGIIDEVIDQRP 225
Y KHT Q+ + I ++RD FMTPE+AKEFG+IDEVI+ RP
Sbjct: 183 YMKHTKQNFDSIGVTLERDTFMTPEDAKEFGLIDEVIETRP 223
>gi|307107893|gb|EFN56134.1| hypothetical protein CHLNCDRAFT_56121 [Chlorella variabilis]
Length = 209
Score = 278 bits (711), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 120/192 (62%), Positives = 164/192 (85%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
++P+VIE +SRGERA+DI+SRLL+ERI+C+NGPI+D ++++VAQLL+LESENP KPI +
Sbjct: 1 MVPVVIESTSRGERAFDIYSRLLRERIVCVNGPIDDHLSNLIVAQLLYLESENPEKPISL 60
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VTAGLAIYDTMQYIR P+ T+ +GQAASM SLLLA+G G+RR+LP+S +M+
Sbjct: 61 YINSPGGVVTAGLAIYDTMQYIRCPVGTLAVGQAASMASLLLAAGEAGQRRSLPHSRVMV 120
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQPSGG GQA D+ I K+I+++ + LN LY KHTGQ+ + +++ ++RD+FM+ EA+E
Sbjct: 121 HQPSGGARGQATDIAIAAKEILKMRELLNGLYVKHTGQTAQRVEEVLERDFFMSAPEARE 180
Query: 214 FGIIDEVIDQRP 225
FGI+DEVI+QRP
Sbjct: 181 FGIVDEVIEQRP 192
>gi|159477909|ref|XP_001697051.1| catalytic subunit of mitochondrial ClpXP protease [Chlamydomonas
reinhardtii]
gi|158274963|gb|EDP00743.1| catalytic subunit of mitochondrial ClpXP protease [Chlamydomonas
reinhardtii]
Length = 231
Score = 278 bits (710), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 129/205 (62%), Positives = 166/205 (80%)
Query: 28 SARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENP 87
S RS S +P+VIE ++RGERAYDIFSRLLKERI+ ING I+D+T++ VVAQLLFLES+ P
Sbjct: 27 SVRSASYVPIVIEQTTRGERAYDIFSRLLKERIVVINGGIDDNTSNSVVAQLLFLESQAP 86
Query: 88 SKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALP 147
KPI MY+NSPGG VTAGLAIYDTMQYIR PI+T+ +GQAASM SLLLA+G KG+RR+LP
Sbjct: 87 DKPITMYINSPGGVVTAGLAIYDTMQYIRCPISTLVVGQAASMASLLLAAGAKGQRRSLP 146
Query: 148 NSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMT 207
NS IM+HQP G GQA D+ I ++I+R+ + L +LY KHTG + E+ +K +DRD FM+
Sbjct: 147 NSRIMLHQPLGAAEGQATDIMIRAQEIMRMKETLTSLYIKHTGCTREMAEKTLDRDSFMS 206
Query: 208 PEEAKEFGIIDEVIDQRPMALVTDA 232
+EAK++G+IDE++ +RP A V A
Sbjct: 207 AQEAKDWGLIDEILTERPAAEVHSA 231
>gi|163793182|ref|ZP_02187158.1| Protease subunit of ATP-dependent Clp protease [alpha
proteobacterium BAL199]
gi|159181828|gb|EDP66340.1| Protease subunit of ATP-dependent Clp protease [alpha
proteobacterium BAL199]
Length = 213
Score = 278 bits (710), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 126/202 (62%), Positives = 163/202 (80%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
SL+PMV+E ++RGERAYDI+SRLLKERII + GPIND A VV AQLLFLE+ENP+K I
Sbjct: 11 SLVPMVVEQTNRGERAYDIYSRLLKERIIFVMGPINDAVASVVCAQLLFLEAENPTKDIA 70
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
MY+NSPGG VT+G+A+YDTM+Y+R I+T+C+G AASMGSLLL +G G+R LPN+ +M
Sbjct: 71 MYINSPGGIVTSGMAMYDTMEYVRPEISTVCMGHAASMGSLLLTAGAPGKRYCLPNAKVM 130
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQPSGG+ GQA D+ IH ++I++ + LN +Y KH+G+SI+ I+K MDRD FMT +EAK
Sbjct: 131 IHQPSGGFQGQASDIEIHAREIIKTRERLNQIYVKHSGRSIDEIEKGMDRDNFMTADEAK 190
Query: 213 EFGIIDEVIDQRPMALVTDAVG 234
FG+IDEVI +RP + TD G
Sbjct: 191 AFGLIDEVIHKRPAPVETDKSG 212
>gi|319405542|emb|CBI79161.1| ATP-dependent Clp protease, proteolytic subunit [Bartonella sp. AR
15-3]
Length = 210
Score = 278 bits (710), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 124/197 (62%), Positives = 161/197 (81%)
Query: 28 SARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENP 87
+ + SL+PMVIE ++RGERAYDIFSRLLKERII INGP+ D+ A +V AQLLFLE+ENP
Sbjct: 5 TKKVLSLVPMVIEQTNRGERAYDIFSRLLKERIIFINGPVEDNMAMLVCAQLLFLEAENP 64
Query: 88 SKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALP 147
K I++Y+NSPGG VT+G+AIYDTMQ+IR ++T+C+GQAASMGSLLL +G G R ALP
Sbjct: 65 KKEINLYINSPGGMVTSGMAIYDTMQFIRPSVSTLCMGQAASMGSLLLTAGAAGRRFALP 124
Query: 148 NSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMT 207
N+ IM+HQPSGG+ GQA D+ H + I+++ LN +Y +HTGQ+ EVI+K +DRD+FMT
Sbjct: 125 NARIMVHQPSGGFQGQASDIERHAQDIIKMKRRLNEIYVQHTGQNYEVIEKTLDRDHFMT 184
Query: 208 PEEAKEFGIIDEVIDQR 224
EEAK+FG+ID+VI R
Sbjct: 185 AEEAKQFGLIDDVIQYR 201
>gi|423711327|ref|ZP_17685647.1| ATP-dependent Clp protease proteolytic subunit [Bartonella
washoensis Sb944nv]
gi|395415241|gb|EJF81676.1| ATP-dependent Clp protease proteolytic subunit [Bartonella
washoensis Sb944nv]
Length = 210
Score = 278 bits (710), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 124/194 (63%), Positives = 158/194 (81%)
Query: 31 SFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKP 90
+ SLIPMVIE ++RGERAYDIFSRLLKERII INGP+ D A +V AQLLFLE+ENP K
Sbjct: 8 ALSLIPMVIEQTNRGERAYDIFSRLLKERIIFINGPVEDGMAMLVCAQLLFLEAENPKKE 67
Query: 91 IHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNST 150
I +Y+NSPGG VT+G+AIYDTMQ+IR P++T+C+GQAASMGSLLL +G KG R LPN+
Sbjct: 68 ISLYINSPGGVVTSGMAIYDTMQFIRPPVSTLCMGQAASMGSLLLTAGAKGHRFTLPNAR 127
Query: 151 IMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEE 210
IM+HQPSGG+ GQA D+ H + I+++ LN +Y +HTGQ EVI++ +DRD+FMT EE
Sbjct: 128 IMVHQPSGGFQGQASDIERHAQDIIKMKQRLNEIYVQHTGQDYEVIERTLDRDHFMTAEE 187
Query: 211 AKEFGIIDEVIDQR 224
AK+FG++D+VI R
Sbjct: 188 AKQFGLVDDVIQYR 201
>gi|319898776|ref|YP_004158869.1| ATP-dependent Clp protease, proteolytic subunit [Bartonella
clarridgeiae 73]
gi|319402740|emb|CBI76287.1| ATP-dependent Clp protease, proteolytic subunit [Bartonella
clarridgeiae 73]
Length = 210
Score = 277 bits (709), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 124/194 (63%), Positives = 160/194 (82%)
Query: 31 SFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKP 90
+ SL+PMV+E ++RGERAYDIFSRLLKERII INGP+ D+ A +V AQLLFLE+ENP K
Sbjct: 8 ALSLVPMVVEQTNRGERAYDIFSRLLKERIIFINGPVEDNMAMLVCAQLLFLEAENPKKE 67
Query: 91 IHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNST 150
I++Y+NSPGG VT+G+AIYDTMQ+IR ++T+C+GQAASMGSLLL +G G R ALPN+
Sbjct: 68 INLYINSPGGVVTSGMAIYDTMQFIRPSVSTLCMGQAASMGSLLLTAGATGRRFALPNAR 127
Query: 151 IMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEE 210
IM+HQPSGG+ GQA D+ H + IV++ LN +Y +HTGQS EVI+K +DRD+FMT EE
Sbjct: 128 IMVHQPSGGFQGQASDIERHAQDIVKMKRRLNEIYVQHTGQSYEVIEKTLDRDHFMTAEE 187
Query: 211 AKEFGIIDEVIDQR 224
+K+FG+ID+VI R
Sbjct: 188 SKQFGLIDDVIQYR 201
>gi|403530411|ref|YP_006664940.1| ATP-dependent Clp protease proteolytic subunit [Bartonella quintana
RM-11]
gi|403232483|gb|AFR26226.1| ATP-dependent Clp protease proteolytic subunit [Bartonella quintana
RM-11]
Length = 206
Score = 277 bits (709), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 123/194 (63%), Positives = 158/194 (81%)
Query: 31 SFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKP 90
+ SL+PMVIE ++RGERAYDIFSRLLKERII INGP+ D A +V AQLLFLE+ENP K
Sbjct: 4 ALSLVPMVIEQTNRGERAYDIFSRLLKERIIFINGPVEDSMAMLVCAQLLFLEAENPKKE 63
Query: 91 IHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNST 150
I +Y+NSPGG VT+G+AIYDTMQ+IR P++T+C+GQAASMGSLLL +G KG R LPN+
Sbjct: 64 ISLYINSPGGVVTSGMAIYDTMQFIRPPVSTLCMGQAASMGSLLLTAGAKGHRFTLPNAR 123
Query: 151 IMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEE 210
IM+HQPSGG+ GQA D+ H + I+++ LN +Y +HTGQ EVI++ +DRD+FMT EE
Sbjct: 124 IMVHQPSGGFQGQASDIERHAQDIIKMKRRLNEIYVQHTGQDYEVIERTLDRDHFMTAEE 183
Query: 211 AKEFGIIDEVIDQR 224
AK+FG++D+VI R
Sbjct: 184 AKQFGLVDDVIQYR 197
>gi|49474139|ref|YP_032181.1| ATP-dependent Clp protease proteolytic subunit [Bartonella quintana
str. Toulouse]
gi|67460275|sp|Q6G178.1|CLPP_BARQU RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|49239643|emb|CAF26003.1| ATP-dependent clp protease proteolytic subunit [Bartonella quintana
str. Toulouse]
Length = 210
Score = 277 bits (709), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 123/194 (63%), Positives = 158/194 (81%)
Query: 31 SFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKP 90
+ SL+PMVIE ++RGERAYDIFSRLLKERII INGP+ D A +V AQLLFLE+ENP K
Sbjct: 8 ALSLVPMVIEQTNRGERAYDIFSRLLKERIIFINGPVEDSMAMLVCAQLLFLEAENPKKE 67
Query: 91 IHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNST 150
I +Y+NSPGG VT+G+AIYDTMQ+IR P++T+C+GQAASMGSLLL +G KG R LPN+
Sbjct: 68 ISLYINSPGGVVTSGMAIYDTMQFIRPPVSTLCMGQAASMGSLLLTAGAKGHRFTLPNAR 127
Query: 151 IMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEE 210
IM+HQPSGG+ GQA D+ H + I+++ LN +Y +HTGQ EVI++ +DRD+FMT EE
Sbjct: 128 IMVHQPSGGFQGQASDIERHAQDIIKMKRRLNEIYVQHTGQDYEVIERTLDRDHFMTAEE 187
Query: 211 AKEFGIIDEVIDQR 224
AK+FG++D+VI R
Sbjct: 188 AKQFGLVDDVIQYR 201
>gi|395789946|ref|ZP_10469454.1| ATP-dependent Clp protease proteolytic subunit [Bartonella taylorii
8TBB]
gi|395428168|gb|EJF94250.1| ATP-dependent Clp protease proteolytic subunit [Bartonella taylorii
8TBB]
Length = 207
Score = 277 bits (709), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 123/194 (63%), Positives = 158/194 (81%)
Query: 31 SFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKP 90
+ SL+PMVIE ++RGERAYDIFSRLLKERII INGP+ D A +V AQLLFLE+ENP K
Sbjct: 8 ALSLVPMVIEQTNRGERAYDIFSRLLKERIIFINGPVEDGMAMLVCAQLLFLEAENPKKE 67
Query: 91 IHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNST 150
I +Y+NSPGG VT+G+AIYDTMQ+IR P++T+C+GQAASMGSLLL +G KG R LPN+
Sbjct: 68 ISLYINSPGGVVTSGMAIYDTMQFIRPPVSTLCMGQAASMGSLLLTAGAKGHRFTLPNAR 127
Query: 151 IMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEE 210
IM+HQPSGG+ GQA D+ H + I+++ LN +Y +HTGQ EVI++ +DRD+FMT EE
Sbjct: 128 IMVHQPSGGFQGQASDIERHAQDIIKMKQRLNEIYVQHTGQDYEVIERTLDRDHFMTAEE 187
Query: 211 AKEFGIIDEVIDQR 224
AK+FG++D+VI R
Sbjct: 188 AKQFGLVDDVIQYR 201
>gi|395787474|ref|ZP_10467075.1| ATP-dependent Clp protease proteolytic subunit [Bartonella
birtlesii LL-WM9]
gi|395411898|gb|EJF78419.1| ATP-dependent Clp protease proteolytic subunit [Bartonella
birtlesii LL-WM9]
Length = 203
Score = 277 bits (708), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 123/194 (63%), Positives = 158/194 (81%)
Query: 31 SFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKP 90
+ SL+PMVIE ++RGERAYDIFSRLLKERII INGP+ D A +V AQLLFLE+ENP K
Sbjct: 4 ALSLVPMVIEQTNRGERAYDIFSRLLKERIIFINGPVEDGMAMLVCAQLLFLEAENPKKE 63
Query: 91 IHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNST 150
I +Y+NSPGG VT+G+AIYDTMQ+IR P++T+C+GQAASMGSLLL +G KG R LPN+
Sbjct: 64 ISLYINSPGGVVTSGMAIYDTMQFIRPPVSTLCMGQAASMGSLLLTAGAKGHRFTLPNAR 123
Query: 151 IMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEE 210
IM+HQPSGG+ GQA D+ H + I+++ LN +Y +HTGQ EVI++ +DRD+FMT EE
Sbjct: 124 IMVHQPSGGFQGQASDIERHAQDIIKMKQRLNEIYVQHTGQDYEVIERTLDRDHFMTAEE 183
Query: 211 AKEFGIIDEVIDQR 224
AK+FG++D+VI R
Sbjct: 184 AKQFGLVDDVIQYR 197
>gi|163868071|ref|YP_001609275.1| ATP-dependent Clp protease proteolytic subunit [Bartonella
tribocorum CIP 105476]
gi|189082448|sp|A9ISA4.1|CLPP_BART1 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|161017722|emb|CAK01280.1| ATP-dependent Clp protease, proteolytic subunit [Bartonella
tribocorum CIP 105476]
Length = 210
Score = 277 bits (708), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 124/194 (63%), Positives = 158/194 (81%)
Query: 31 SFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKP 90
+ SL+PMVIE ++RGERAYDIFSRLLKERII INGP+ D A +V AQLLFLE+ENP K
Sbjct: 8 ALSLVPMVIEQTNRGERAYDIFSRLLKERIIFINGPVEDGMAMLVCAQLLFLEAENPKKE 67
Query: 91 IHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNST 150
I +Y+NSPGG VT+G+AIYDTMQ+IR P++T+C+GQAASMGSLLL +G KG R ALPN+
Sbjct: 68 ISLYINSPGGVVTSGMAIYDTMQFIRPPVSTLCMGQAASMGSLLLTAGAKGHRFALPNAR 127
Query: 151 IMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEE 210
IM+HQPSGG+ GQA D+ H + I+++ LN +Y +HTGQ EVI++ +DRD+FMT EE
Sbjct: 128 IMVHQPSGGFQGQASDIERHAQDIIKMKRRLNEIYVQHTGQGYEVIERTLDRDHFMTAEE 187
Query: 211 AKEFGIIDEVIDQR 224
AK FG++D+VI R
Sbjct: 188 AKAFGLVDDVIHYR 201
>gi|383848841|ref|XP_003700056.1| PREDICTED: putative ATP-dependent Clp protease proteolytic subunit,
mitochondrial-like [Megachile rotundata]
Length = 241
Score = 276 bits (707), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 128/210 (60%), Positives = 162/210 (77%), Gaps = 1/210 (0%)
Query: 17 FLQLSKPSAQISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVV 76
FLQ+S P +IS R + +P+V+E S RGERAYDI+SRLLKERIIC+ GPI D+ + VV+
Sbjct: 9 FLQISVPCQKISNRYLNFVPVVVEQSGRGERAYDIYSRLLKERIICLMGPITDNVSSVVI 68
Query: 77 AQLLFLESENPSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLA 136
AQLLFL+SE+ PIHMY+NSPGG VTAGL IYDTMQY+ P+ T C+GQA SM SLLLA
Sbjct: 69 AQLLFLQSESSKNPIHMYINSPGGSVTAGLGIYDTMQYVLPPVATWCVGQACSMASLLLA 128
Query: 137 SGTKGERRALPNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVI 196
+GTKG R +LPN+ IM HQPSGG SGQA D+ I +I+++ +N LY KHTG +E I
Sbjct: 129 AGTKGMRHSLPNARIMTHQPSGGVSGQATDIQIQALEILKLKKQINQLYVKHTGMELEKI 188
Query: 197 QKNMDRDYFMTPEEAKEFGIIDEVIDQRPM 226
++ M+RD FM+P +AKEFGIID+V+ PM
Sbjct: 189 EQCMERDNFMSPAKAKEFGIIDKVLTH-PM 217
>gi|395792321|ref|ZP_10471759.1| ATP-dependent Clp protease proteolytic subunit [Bartonella vinsonii
subsp. arupensis Pm136co]
gi|423714326|ref|ZP_17688585.1| ATP-dependent Clp protease proteolytic subunit [Bartonella vinsonii
subsp. arupensis OK-94-513]
gi|395420710|gb|EJF86975.1| ATP-dependent Clp protease proteolytic subunit [Bartonella vinsonii
subsp. arupensis OK-94-513]
gi|395432835|gb|EJF98810.1| ATP-dependent Clp protease proteolytic subunit [Bartonella vinsonii
subsp. arupensis Pm136co]
Length = 210
Score = 276 bits (707), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 122/193 (63%), Positives = 158/193 (81%)
Query: 32 FSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPI 91
SL+PMVIE ++RGERAYDIFSRLLKERII INGP+ D+ A +V AQLLFLE+ENP K I
Sbjct: 9 LSLVPMVIEQTNRGERAYDIFSRLLKERIIFINGPVEDNMAMLVCAQLLFLEAENPKKEI 68
Query: 92 HMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTI 151
+Y+NSPGG VT+G+AIYDTMQ+IR P++T+C+GQAASMGSLLL +G KG R LPN+ I
Sbjct: 69 SLYINSPGGVVTSGMAIYDTMQFIRPPVSTLCMGQAASMGSLLLTAGAKGHRFTLPNARI 128
Query: 152 MIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEA 211
M+HQPSGG+ GQA D+ H + I+++ LN +Y +HTGQ E+I++ +DRD+FMT EEA
Sbjct: 129 MVHQPSGGFQGQASDIERHAQDIIKMKRRLNEIYVQHTGQDYEIIERTLDRDHFMTAEEA 188
Query: 212 KEFGIIDEVIDQR 224
K+FG++D+VI R
Sbjct: 189 KQFGLVDDVIQYR 201
>gi|395791168|ref|ZP_10470626.1| ATP-dependent Clp protease proteolytic subunit [Bartonella alsatica
IBS 382]
gi|395408531|gb|EJF75141.1| ATP-dependent Clp protease proteolytic subunit [Bartonella alsatica
IBS 382]
Length = 207
Score = 276 bits (707), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 122/194 (62%), Positives = 158/194 (81%)
Query: 31 SFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKP 90
+ SL+PMVIE ++RGERAYDIFSRLLKERI+ INGP+ D A +V AQLLFLE+ENP K
Sbjct: 8 ALSLVPMVIEQTNRGERAYDIFSRLLKERIVFINGPVEDGMAMLVCAQLLFLEAENPKKE 67
Query: 91 IHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNST 150
I +Y+NSPGG VT+G+AIYDTMQ+IR P++T+C+GQAASMGSLLL +G KG R LPN+
Sbjct: 68 ISLYINSPGGVVTSGMAIYDTMQFIRPPVSTLCMGQAASMGSLLLTAGAKGHRFTLPNAR 127
Query: 151 IMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEE 210
IM+HQPSGG+ GQA D+ H + I+++ LN +Y +HTGQ EVI+K +DRD+FMT EE
Sbjct: 128 IMVHQPSGGFQGQASDIERHAQDIIKMKRRLNEIYVQHTGQDYEVIEKTLDRDHFMTAEE 187
Query: 211 AKEFGIIDEVIDQR 224
AK+FG++D++I R
Sbjct: 188 AKQFGLVDDIIQYR 201
>gi|121602655|ref|YP_988860.1| ATP-dependent Clp protease proteolytic subunit [Bartonella
bacilliformis KC583]
gi|421760663|ref|ZP_16197478.1| ATP-dependent Clp protease proteolytic subunit [Bartonella
bacilliformis INS]
gi|166201800|sp|A1USA7.1|CLPP_BARBK RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|120614832|gb|ABM45433.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bartonella
bacilliformis KC583]
gi|411174752|gb|EKS44782.1| ATP-dependent Clp protease proteolytic subunit [Bartonella
bacilliformis INS]
Length = 210
Score = 276 bits (707), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 124/194 (63%), Positives = 157/194 (80%)
Query: 31 SFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKP 90
+ SL+PMV+E ++RGERAYDIFSRLLKERII INGP+ D A +V AQLLFLE+ENP K
Sbjct: 8 ALSLVPMVVEQTNRGERAYDIFSRLLKERIIFINGPVEDSMAMLVCAQLLFLEAENPKKE 67
Query: 91 IHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNST 150
I +Y+NSPGG VT+G+AIYDTMQ+IR PI+T+C+GQAASMGSLLL +G KG R +LPN+
Sbjct: 68 ISLYINSPGGVVTSGMAIYDTMQFIRPPISTLCMGQAASMGSLLLTAGAKGHRFSLPNAR 127
Query: 151 IMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEE 210
IM+HQPSGG+ GQA D+ H + I+R+ LN +Y +HTGQ E+I+ +DRD+FMT EE
Sbjct: 128 IMVHQPSGGFQGQASDIERHAQDIIRMKRHLNEIYVQHTGQDYEIIENTLDRDHFMTAEE 187
Query: 211 AKEFGIIDEVIDQR 224
AK FG+ID+VI R
Sbjct: 188 AKMFGLIDDVIQYR 201
>gi|395780056|ref|ZP_10460523.1| ATP-dependent Clp protease proteolytic subunit [Bartonella
washoensis 085-0475]
gi|395419323|gb|EJF85623.1| ATP-dependent Clp protease proteolytic subunit [Bartonella
washoensis 085-0475]
Length = 210
Score = 276 bits (706), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 123/193 (63%), Positives = 157/193 (81%)
Query: 32 FSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPI 91
SL+PMVIE ++RGERAYDIFSRLLKERII INGP+ D A +V AQLLFLE+ENP K I
Sbjct: 9 LSLVPMVIEQTNRGERAYDIFSRLLKERIIFINGPVEDGMAMLVCAQLLFLEAENPKKEI 68
Query: 92 HMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTI 151
+Y+NSPGG VT+G+AIYDTMQ+IR P++T+C+GQAASMGSLLL +G KG R LPN+ I
Sbjct: 69 SLYINSPGGVVTSGMAIYDTMQFIRPPVSTLCMGQAASMGSLLLTAGAKGHRFTLPNARI 128
Query: 152 MIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEA 211
M+HQPSGG+ GQA D+ H + I+++ LN +Y +HTGQ EVI++ +DRD+FMT EEA
Sbjct: 129 MVHQPSGGFQGQASDIERHAQDIIKMKQRLNEIYVQHTGQDYEVIERTLDRDHFMTAEEA 188
Query: 212 KEFGIIDEVIDQR 224
K+FG++D+VI R
Sbjct: 189 KKFGLVDDVIQYR 201
>gi|395764673|ref|ZP_10445297.1| ATP-dependent Clp protease proteolytic subunit [Bartonella sp.
DB5-6]
gi|395414210|gb|EJF80659.1| ATP-dependent Clp protease proteolytic subunit [Bartonella sp.
DB5-6]
Length = 207
Score = 276 bits (705), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 122/194 (62%), Positives = 158/194 (81%)
Query: 31 SFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKP 90
+ SL+PMVIE ++RGERAYDIFSRLLKERII INGP+ D A +V AQLLFLE+ENP K
Sbjct: 8 ALSLVPMVIEQTNRGERAYDIFSRLLKERIIFINGPVEDGMAMLVCAQLLFLEAENPKKE 67
Query: 91 IHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNST 150
I +Y+NSPGG VT+G+AIYDTMQ+IR P++T+C+GQAASMGSLLL +G KG R LPN+
Sbjct: 68 ISLYINSPGGVVTSGMAIYDTMQFIRPPVSTLCMGQAASMGSLLLTAGAKGHRFTLPNAR 127
Query: 151 IMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEE 210
IM+HQPSGG+ GQA D+ H + I+++ LN +Y +HTGQ EVI++ +DRD+FMT EE
Sbjct: 128 IMVHQPSGGFQGQASDIERHAQDIIKMKQRLNEIYVQHTGQDYEVIERTLDRDHFMTAEE 187
Query: 211 AKEFGIIDEVIDQR 224
+K+FG++D+VI R
Sbjct: 188 SKQFGLVDDVIQYR 201
>gi|49475380|ref|YP_033421.1| ATP-dependent Clp protease proteolytic subunit [Bartonella henselae
str. Houston-1]
gi|67460276|sp|Q6G3Z3.1|CLPP_BARHE RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|49238186|emb|CAF27396.1| ATP-dependent clp protease proteolytic subunit [Bartonella henselae
str. Houston-1]
Length = 210
Score = 276 bits (705), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 122/194 (62%), Positives = 159/194 (81%)
Query: 31 SFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKP 90
+ SL+PMVIE ++RGERAYDIFSRLLKERII INGP+ D A +V AQLLFLE+ENP K
Sbjct: 8 ALSLVPMVIEQTNRGERAYDIFSRLLKERIIFINGPVEDGMAMLVCAQLLFLEAENPKKE 67
Query: 91 IHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNST 150
I +Y+NSPGG VT+G+AIYDTMQ+IR P++T+C+GQAASMGSLLL +G KG R LPN+
Sbjct: 68 ISLYINSPGGVVTSGMAIYDTMQFIRPPVSTLCMGQAASMGSLLLTAGAKGHRFTLPNAR 127
Query: 151 IMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEE 210
IM+HQPSGG+ GQA D+ H + I+++ LN +Y +HTGQ+ +VI++ +DRD+FMT EE
Sbjct: 128 IMVHQPSGGFQGQASDIERHAQDIIKMKQRLNEIYVQHTGQNYDVIERTLDRDHFMTAEE 187
Query: 211 AKEFGIIDEVIDQR 224
AK+FG++D+VI R
Sbjct: 188 AKQFGLVDDVIQYR 201
>gi|395782017|ref|ZP_10462426.1| ATP-dependent Clp protease proteolytic subunit [Bartonella
rattimassiliensis 15908]
gi|395419868|gb|EJF86154.1| ATP-dependent Clp protease proteolytic subunit [Bartonella
rattimassiliensis 15908]
Length = 206
Score = 276 bits (705), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 123/194 (63%), Positives = 157/194 (80%)
Query: 31 SFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKP 90
+ SL+PMVIE ++RGERAYDIFSRLLKERII INGP+ D A +V AQLLFLE+ENP K
Sbjct: 4 ALSLVPMVIEQTNRGERAYDIFSRLLKERIIFINGPVEDGMAMLVCAQLLFLEAENPKKE 63
Query: 91 IHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNST 150
I +Y+NSPGG VT+G+AIYDTMQ+IR P++T+C+GQAASMGSLLL +G KG R LPN+
Sbjct: 64 ISLYINSPGGVVTSGMAIYDTMQFIRPPVSTLCMGQAASMGSLLLTAGAKGHRFTLPNAR 123
Query: 151 IMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEE 210
IM+HQPSGG+ GQA D+ H + I+++ LN +Y +HTGQ EVI++ +DRD+FMT EE
Sbjct: 124 IMVHQPSGGFQGQASDIERHAQDIIKMKRRLNEIYVQHTGQDYEVIERTLDRDHFMTAEE 183
Query: 211 AKEFGIIDEVIDQR 224
AK FG++D+VI R
Sbjct: 184 AKAFGLVDDVIQYR 197
>gi|395778319|ref|ZP_10458831.1| ATP-dependent Clp protease proteolytic subunit [Bartonella
elizabethae Re6043vi]
gi|423715370|ref|ZP_17689594.1| ATP-dependent Clp protease proteolytic subunit [Bartonella
elizabethae F9251]
gi|395417527|gb|EJF83864.1| ATP-dependent Clp protease proteolytic subunit [Bartonella
elizabethae Re6043vi]
gi|395430206|gb|EJF96257.1| ATP-dependent Clp protease proteolytic subunit [Bartonella
elizabethae F9251]
Length = 210
Score = 275 bits (704), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 123/194 (63%), Positives = 157/194 (80%)
Query: 31 SFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKP 90
+ SL+PMVIE ++RGERAYDIFSRLLKERII INGP+ D A +V AQLLFLE+ENP K
Sbjct: 8 ALSLVPMVIEQTNRGERAYDIFSRLLKERIIFINGPVEDGMAMLVCAQLLFLEAENPKKE 67
Query: 91 IHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNST 150
I +Y+NSPGG VT+G+AIYDTMQ+IR P++T+C+GQAASMGSLLL +G KG R LPN+
Sbjct: 68 ISLYINSPGGVVTSGMAIYDTMQFIRPPVSTLCMGQAASMGSLLLTAGAKGHRFTLPNAR 127
Query: 151 IMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEE 210
IM+HQPSGG+ GQA D+ H + I+++ LN +Y +HTGQ EVI++ +DRD+FMT EE
Sbjct: 128 IMVHQPSGGFQGQASDIERHAQDIIKMKRRLNEIYVQHTGQDYEVIERTLDRDHFMTAEE 187
Query: 211 AKEFGIIDEVIDQR 224
AK FG++D+VI R
Sbjct: 188 AKAFGLVDDVIQYR 201
>gi|380012458|ref|XP_003690300.1| PREDICTED: putative ATP-dependent Clp protease proteolytic subunit,
mitochondrial-like [Apis florea]
Length = 236
Score = 275 bits (704), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 128/212 (60%), Positives = 162/212 (76%), Gaps = 1/212 (0%)
Query: 15 TKFLQLSKPSAQISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHV 74
+ LQ+ P ++S R + IP+V+E S RGERAYDI+SRLLKERIIC+ GPI D+ + V
Sbjct: 6 SNLLQIFVPGQKVSKRYLNFIPVVVEQSGRGERAYDIYSRLLKERIICLMGPITDNVSSV 65
Query: 75 VVAQLLFLESENPSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLL 134
V+AQLLFL+SEN PIHMY+NSPGG VTAGL IYDTMQY+ P+ T C+GQA SM SLL
Sbjct: 66 VIAQLLFLQSENSKNPIHMYINSPGGSVTAGLGIYDTMQYVLPPVATWCVGQACSMASLL 125
Query: 135 LASGTKGERRALPNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIE 194
LA+GTKG R +LPN+ IM HQPSGG SGQA D+ I +I+++ +N LY KHTG +E
Sbjct: 126 LAAGTKGMRHSLPNARIMTHQPSGGVSGQATDIQIQALEILKLKKQINNLYVKHTGLDLE 185
Query: 195 VIQKNMDRDYFMTPEEAKEFGIIDEVIDQRPM 226
I++ M+RD FM+P+EAKEFGIID+V+ PM
Sbjct: 186 KIERCMERDNFMSPKEAKEFGIIDKVLSH-PM 216
>gi|66515781|ref|XP_392540.2| PREDICTED: putative ATP-dependent Clp protease proteolytic subunit,
mitochondrial-like [Apis mellifera]
Length = 237
Score = 275 bits (704), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 128/212 (60%), Positives = 162/212 (76%), Gaps = 1/212 (0%)
Query: 15 TKFLQLSKPSAQISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHV 74
+ LQ+ P ++S R + IP+V+E S RGERAYDI+SRLLKERIIC+ GPI D+ + V
Sbjct: 6 SNLLQIFVPGQKVSKRYLNFIPVVVEQSGRGERAYDIYSRLLKERIICLMGPITDNVSSV 65
Query: 75 VVAQLLFLESENPSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLL 134
V+AQLLFL+SEN PIHMY+NSPGG VTAGL IYDTMQY+ P+ T C+GQA SM SLL
Sbjct: 66 VIAQLLFLQSENSKNPIHMYINSPGGSVTAGLGIYDTMQYVLPPVATWCVGQACSMASLL 125
Query: 135 LASGTKGERRALPNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIE 194
LA+GTKG R +LPN+ IM HQPSGG SGQA D+ I +I+++ +N LY KHTG +E
Sbjct: 126 LAAGTKGMRHSLPNARIMTHQPSGGVSGQATDIQIQALEILKLKKQINNLYVKHTGLDLE 185
Query: 195 VIQKNMDRDYFMTPEEAKEFGIIDEVIDQRPM 226
I++ M+RD FM+P+EAKEFGIID+V+ PM
Sbjct: 186 KIERCMERDNFMSPKEAKEFGIIDKVLSH-PM 216
>gi|240850274|ref|YP_002971667.1| ATP-dependent Clp protease proteolytic subunit ClpP [Bartonella
grahamii as4aup]
gi|240267397|gb|ACS50985.1| ATP-dependent Clp protease proteolytic subunit ClpP [Bartonella
grahamii as4aup]
Length = 210
Score = 275 bits (703), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 122/194 (62%), Positives = 157/194 (80%)
Query: 31 SFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKP 90
+ SL+PMVIE ++RGERAYDIFSRLLKERII INGP+ D A +V AQLLFLE+ENP K
Sbjct: 8 ALSLVPMVIEQTNRGERAYDIFSRLLKERIIFINGPVEDGMAMLVCAQLLFLEAENPKKE 67
Query: 91 IHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNST 150
I +Y+NSPGG VT+G+AIYDTMQ+IR P++T+C+GQAASMGSLLL +G KG R LPN+
Sbjct: 68 ISLYINSPGGVVTSGMAIYDTMQFIRPPVSTLCMGQAASMGSLLLTAGAKGHRFTLPNAR 127
Query: 151 IMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEE 210
IM+HQPSGG+ GQA D+ H + I+++ LN +Y +HTGQ E+I++ +DRD+FMT EE
Sbjct: 128 IMVHQPSGGFQGQASDIERHAQDIIKMKRRLNEIYVQHTGQDYEIIERTLDRDHFMTAEE 187
Query: 211 AKEFGIIDEVIDQR 224
AK FG++D+VI R
Sbjct: 188 AKAFGLVDDVIQYR 201
>gi|452824243|gb|EME31247.1| ATP-dependent Clp protease, protease subunit [Galdieria
sulphuraria]
Length = 250
Score = 275 bits (702), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 127/195 (65%), Positives = 157/195 (80%), Gaps = 1/195 (0%)
Query: 31 SFS-LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSK 89
SFS LIPMV+E + RGER +DI+SRLLKERIIC+NG I DD A + VAQLLFLE+ENP K
Sbjct: 42 SFSTLIPMVLEQTPRGERVFDIYSRLLKERIICLNGTITDDVASLTVAQLLFLEAENPEK 101
Query: 90 PIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNS 149
++MY+NSPGG VTAGLA+YDTMQYI P++TICLGQA SM SLLLA+G KGERR+LPNS
Sbjct: 102 KVYMYINSPGGSVTAGLAVYDTMQYISPPVSTICLGQACSMASLLLAAGEKGERRSLPNS 161
Query: 150 TIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPE 209
IMIHQPSGG +G A D++IH +I+ + LN LY HTGQ I I+ M+RD+FM+ +
Sbjct: 162 RIMIHQPSGGATGPASDISIHANEILYLRKRLNELYAYHTGQDIATIETKMERDHFMSAD 221
Query: 210 EAKEFGIIDEVIDQR 224
+A +FGI+DEVI +R
Sbjct: 222 DALKFGILDEVIVRR 236
>gi|294083692|ref|YP_003550449.1| protease subunit of ATP-dependent Clp protease [Candidatus
Puniceispirillum marinum IMCC1322]
gi|292663264|gb|ADE38365.1| Protease subunit of ATP-dependent Clp protease [Candidatus
Puniceispirillum marinum IMCC1322]
Length = 216
Score = 275 bits (702), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 120/193 (62%), Positives = 164/193 (84%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E ++RGER+YDIFSRLLKERII +NGP++D TA +V +QLLFLESENP+K I
Sbjct: 16 NLVPMVVEQTNRGERSYDIFSRLLKERIIFLNGPVDDTTASLVCSQLLFLESENPTKDIS 75
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
MY+NSPGG VT+GLAIYDTM+YIR ++T+C+GQAASMGSLLL +G G+R +LPN+ IM
Sbjct: 76 MYINSPGGIVTSGLAIYDTMEYIRPDVSTVCMGQAASMGSLLLMAGAAGKRYSLPNARIM 135
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
HQPSGG+SGQA D+ IH ++I+ + LN +Y KHTG++++ ++K M+RD FMT E+A+
Sbjct: 136 THQPSGGFSGQASDIEIHAREILDLRKRLNGMYVKHTGKTLKDVEKIMERDTFMTAEDAQ 195
Query: 213 EFGIIDEVIDQRP 225
+FG+IDEV+++RP
Sbjct: 196 KFGLIDEVVEKRP 208
>gi|319404099|emb|CBI77689.1| ATP-dependent Clp protease, proteolytic subunit [Bartonella
rochalimae ATCC BAA-1498]
gi|319407112|emb|CBI80749.1| ATP-dependent Clp protease, proteolytic subunit [Bartonella sp.
1-1C]
Length = 210
Score = 274 bits (701), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 122/195 (62%), Positives = 159/195 (81%)
Query: 30 RSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSK 89
+ SL+PMV+E ++RGERAYDIFSRLLKERII INGP+ D+ A +V AQLLFLE+ENP K
Sbjct: 7 KVLSLVPMVVEQTNRGERAYDIFSRLLKERIIFINGPVEDNMAMLVCAQLLFLEAENPKK 66
Query: 90 PIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNS 149
I++Y+NSPGG VT+G+AIYDTMQ+IR ++T+C+GQAASMGSLLL +G G R ALPN+
Sbjct: 67 EINLYINSPGGVVTSGMAIYDTMQFIRPSVSTLCMGQAASMGSLLLTAGATGRRFALPNA 126
Query: 150 TIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPE 209
IM+HQPSGG+ GQA D+ H + I+++ LN +Y +HTGQS EVI+ +DRD+FMT E
Sbjct: 127 RIMVHQPSGGFQGQASDIERHAQDIIKMKRRLNEIYVQHTGQSYEVIENTLDRDHFMTAE 186
Query: 210 EAKEFGIIDEVIDQR 224
E+K+FG+ID+VI R
Sbjct: 187 ESKQFGLIDDVIQYR 201
>gi|326403118|ref|YP_004283199.1| ATP-dependent Clp protease proteolytic subunit [Acidiphilium
multivorum AIU301]
gi|338981066|ref|ZP_08632302.1| ClpP [Acidiphilium sp. PM]
gi|325049979|dbj|BAJ80317.1| ATP-dependent Clp protease proteolytic subunit [Acidiphilium
multivorum AIU301]
gi|338208032|gb|EGO95931.1| ClpP [Acidiphilium sp. PM]
Length = 209
Score = 274 bits (701), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 121/193 (62%), Positives = 159/193 (82%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
SL+PMV+E ++RGER+YDIFSRLLKERII + GP+ D ++ AQLLFLESENPSK I
Sbjct: 12 SLVPMVVEQTARGERSYDIFSRLLKERIIFLTGPVYDQVGSLIAAQLLFLESENPSKEIA 71
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
Y+NSPGG V+AGLAIYDTMQYI+SP++T+C+GQAASMGSLLLA+G KG+R ALPNS IM
Sbjct: 72 FYINSPGGVVSAGLAIYDTMQYIKSPVSTVCIGQAASMGSLLLAAGEKGKRFALPNSRIM 131
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
+HQPSGG GQA D+ I ++I+ + LN +Y HTGQS+E I++ ++RD FM+ EA+
Sbjct: 132 VHQPSGGAQGQASDIEIQAREILTLRRRLNDIYVTHTGQSLEAIEQALERDRFMSANEAQ 191
Query: 213 EFGIIDEVIDQRP 225
EFG++DEV++++P
Sbjct: 192 EFGLVDEVVEKKP 204
>gi|307177704|gb|EFN66732.1| Putative ATP-dependent Clp protease proteolytic subunit,
mitochondrial [Camponotus floridanus]
Length = 234
Score = 274 bits (700), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 124/205 (60%), Positives = 159/205 (77%)
Query: 17 FLQLSKPSAQISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVV 76
LQ+ ++S+R+ + +P+V+E S RGERAYDI+SRLLKERIIC+ GPI DD + VV
Sbjct: 8 LLQIVACGQKMSSRNLNFVPIVVEQSGRGERAYDIYSRLLKERIICLMGPITDDVSSAVV 67
Query: 77 AQLLFLESENPSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLA 136
AQLLFL+SE+ PIH+Y+NSPGG VTAGL IYDTMQY+ P++T C+GQA SM SLLLA
Sbjct: 68 AQLLFLQSESSKNPIHLYINSPGGSVTAGLGIYDTMQYVLPPVSTWCVGQACSMASLLLA 127
Query: 137 SGTKGERRALPNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVI 196
+GTKG R +LPN+ IM HQPSGG GQA D+ I +I+++ +N LY KHTGQ +E I
Sbjct: 128 AGTKGMRHSLPNARIMTHQPSGGVQGQATDIQIQALEIIKLKKQINELYVKHTGQDLEKI 187
Query: 197 QKNMDRDYFMTPEEAKEFGIIDEVI 221
+K M+RD FM+P EAKEFGIID+V+
Sbjct: 188 EKGMERDNFMSPTEAKEFGIIDKVL 212
>gi|148259928|ref|YP_001234055.1| ATP-dependent Clp protease proteolytic subunit [Acidiphilium
cryptum JF-5]
gi|146401609|gb|ABQ30136.1| ATP-dependent Clp protease proteolytic subunit ClpP [Acidiphilium
cryptum JF-5]
Length = 211
Score = 274 bits (700), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 121/193 (62%), Positives = 159/193 (82%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
SL+PMV+E ++RGER+YDIFSRLLKERII + GP+ D ++ AQLLFLESENPSK I
Sbjct: 14 SLVPMVVEQTARGERSYDIFSRLLKERIIFLTGPVYDQVGSLIAAQLLFLESENPSKEIA 73
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
Y+NSPGG V+AGLAIYDTMQYI+SP++T+C+GQAASMGSLLLA+G KG+R ALPNS IM
Sbjct: 74 FYINSPGGVVSAGLAIYDTMQYIKSPVSTVCIGQAASMGSLLLAAGEKGKRFALPNSRIM 133
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
+HQPSGG GQA D+ I ++I+ + LN +Y HTGQS+E I++ ++RD FM+ EA+
Sbjct: 134 VHQPSGGAQGQASDIEIQAREILTLRRRLNDIYVTHTGQSLEAIEQALERDRFMSANEAQ 193
Query: 213 EFGIIDEVIDQRP 225
EFG++DEV++++P
Sbjct: 194 EFGLVDEVVEKKP 206
>gi|154253670|ref|YP_001414494.1| endopeptidase Clp [Parvibaculum lavamentivorans DS-1]
gi|154157620|gb|ABS64837.1| Endopeptidase Clp [Parvibaculum lavamentivorans DS-1]
Length = 213
Score = 273 bits (699), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 127/217 (58%), Positives = 166/217 (76%), Gaps = 13/217 (5%)
Query: 32 FSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPI 91
+L+PMV+E ++RGERAYDIFSRLLKE II + GP+ D A +V AQLLFLE+ENP K I
Sbjct: 9 MNLVPMVVEQTNRGERAYDIFSRLLKEHIIFVAGPVEDGMAMLVTAQLLFLEAENPKKEI 68
Query: 92 HMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTI 151
MY+NSPGG VT+GLAIYDTMQ+IR P++T+C+GQAASMGSLLLA+G KG R ALPN+ I
Sbjct: 69 SMYINSPGGVVTSGLAIYDTMQHIRPPVSTVCMGQAASMGSLLLAAGEKGMRFALPNARI 128
Query: 152 MIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEA 211
M+HQPSGG+ GQA D+ IH ++ + + + LN +YCKHTGQS++ ++ ++RD FM+PE A
Sbjct: 129 MVHQPSGGFQGQASDIEIHARETIAIRERLNNIYCKHTGQSLKAVEDALERDNFMSPERA 188
Query: 212 KEFGIIDEV-IDQRPMALVTDAVGREGKEGKEGKEKG 247
EFGIID V +D+ P++ G EG +KG
Sbjct: 189 LEFGIIDHVGVDRPPLS------------GSEGAKKG 213
>gi|58584810|ref|YP_198383.1| ATP-dependent Clp protease proteolytic subunit [Wolbachia
endosymbiont strain TRS of Brugia malayi]
gi|67460156|sp|Q5GS83.1|CLPP_WOLTR RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|58419126|gb|AAW71141.1| Protease subunit of ATP-dependent Clp protease [Wolbachia
endosymbiont strain TRS of Brugia malayi]
Length = 208
Score = 273 bits (698), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 126/193 (65%), Positives = 159/193 (82%)
Query: 32 FSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPI 91
+LIP+VIE +SRGERAYDI+SRL+KERII + GP+ D+ A V+VAQLLFLESENP K I
Sbjct: 1 MTLIPIVIEQTSRGERAYDIYSRLVKERIIFVTGPVEDNMASVIVAQLLFLESENPDKDI 60
Query: 92 HMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTI 151
+MY+NSPGG VTAGL+IYDTMQYI+ ++T+C+GQAASMGSLLLA+GT+G+R +LP+S I
Sbjct: 61 YMYINSPGGVVTAGLSIYDTMQYIKPDVSTLCIGQAASMGSLLLAAGTEGKRYSLPHSRI 120
Query: 152 MIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEA 211
MIHQPSGGY GQA D+ IH +I+RV LN +Y KHTG S++ I+ M+RD FM PEEA
Sbjct: 121 MIHQPSGGYQGQATDIEIHANEILRVKRKLNQIYEKHTGNSLKKIEGMMERDKFMDPEEA 180
Query: 212 KEFGIIDEVIDQR 224
+ G+ID VI +R
Sbjct: 181 RRIGLIDRVIAER 193
>gi|402497009|ref|YP_006556269.1| protease subunit of ATP-dependent Clp protease [Wolbachia
endosymbiont of Onchocerca ochengi]
gi|398650282|emb|CCF78452.1| protease subunit of ATP-dependent Clp protease [Wolbachia
endosymbiont of Onchocerca ochengi]
Length = 199
Score = 273 bits (698), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 126/193 (65%), Positives = 160/193 (82%)
Query: 32 FSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPI 91
+LIP+VIE +SRGERAYDI+SRL+KERII + GPI D A V+VAQLLFLESENP K I
Sbjct: 1 MTLIPIVIEQTSRGERAYDIYSRLVKERIIFVTGPIEDSMASVIVAQLLFLESENPDKDI 60
Query: 92 HMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTI 151
+MY+NSPGG VTAGL+IYDTMQYI+ ++T+C+GQAASMGSLLLA+GTKG+R +LP+S I
Sbjct: 61 YMYINSPGGIVTAGLSIYDTMQYIKPDVSTLCIGQAASMGSLLLAAGTKGKRYSLPHSRI 120
Query: 152 MIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEA 211
MIHQPSGGY GQA D+ IH +I+RV LN +Y KHTG S++ I++ M+RD FM EEA
Sbjct: 121 MIHQPSGGYQGQATDIEIHANEILRVKKKLNQIYEKHTGNSLKKIEEMMERDKFMDSEEA 180
Query: 212 KEFGIIDEVIDQR 224
K+ G++D+V+ +R
Sbjct: 181 KKIGLVDKVMAER 193
>gi|389877840|ref|YP_006371405.1| Protease subunit of ATP-dependent Clp proteases [Tistrella mobilis
KA081020-065]
gi|388528624|gb|AFK53821.1| Protease subunit of ATP-dependent Clp proteases [Tistrella mobilis
KA081020-065]
Length = 210
Score = 273 bits (697), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 121/195 (62%), Positives = 158/195 (81%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
SL+PMV+E ++RGERAYDI+SRLLKERII + GP+ D+ + ++ AQLLFLESENP K I
Sbjct: 11 SLVPMVVEQTNRGERAYDIYSRLLKERIIFLTGPVEDNVSSLITAQLLFLESENPKKDIS 70
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
Y+NSPGG VT+GLAIYDTMQYIR + T+C+GQAASMGSLLLA G G+R ALPN+ IM
Sbjct: 71 FYINSPGGVVTSGLAIYDTMQYIRCDVQTLCIGQAASMGSLLLAGGAPGKRFALPNARIM 130
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
+HQPSGG+ GQA D+ IH ++I+++ LN +Y +HTG+ +E +++ M+RD FM+PEEAK
Sbjct: 131 VHQPSGGFRGQATDIEIHAREILKLRARLNEIYVQHTGRPLEEVERAMERDNFMSPEEAK 190
Query: 213 EFGIIDEVIDQRPMA 227
FG+ID V+ QRP A
Sbjct: 191 AFGLIDTVVAQRPKA 205
>gi|353327928|ref|ZP_08970255.1| ATP-dependent Clp protease proteolytic subunit [Wolbachia
endosymbiont wVitB of Nasonia vitripennis]
Length = 213
Score = 273 bits (697), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 125/196 (63%), Positives = 159/196 (81%)
Query: 29 ARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPS 88
+ +LIP+V+E +SRGERAYDI+SRL+KERII + GPI D+ A V+VAQLLFLESENP
Sbjct: 3 GKGMTLIPIVVEQTSRGERAYDIYSRLVKERIIFVTGPIEDNMASVIVAQLLFLESENPD 62
Query: 89 KPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPN 148
K IHMY+NSPGG VTAGL+IYDTMQYI ++T+C+GQAASMGSLLLA+G KG+R +LP+
Sbjct: 63 KDIHMYINSPGGVVTAGLSIYDTMQYISPNVSTLCIGQAASMGSLLLAAGAKGKRHSLPH 122
Query: 149 STIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTP 208
S IMIHQPSGGY GQA D+ IH K+I+R+ LN +Y KHTG S++ I+ M+RD F+ P
Sbjct: 123 SRIMIHQPSGGYQGQATDIEIHAKEILRIKKKLNQIYEKHTGHSLKKIEGMMERDKFLDP 182
Query: 209 EEAKEFGIIDEVIDQR 224
EA + G+ID+VI +R
Sbjct: 183 IEAMKLGLIDKVIAER 198
>gi|156541196|ref|XP_001599209.1| PREDICTED: putative ATP-dependent Clp protease proteolytic subunit,
mitochondrial-like [Nasonia vitripennis]
Length = 234
Score = 273 bits (697), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 126/207 (60%), Positives = 160/207 (77%)
Query: 17 FLQLSKPSAQISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVV 76
+QL+ + RS +L+P+V+E + RGERAYDI+SRLLKERIIC+ GPI DD + +VV
Sbjct: 8 LVQLNSSIKKSCTRSLNLVPIVVEQTGRGERAYDIYSRLLKERIICLMGPITDDISSLVV 67
Query: 77 AQLLFLESENPSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLA 136
AQLLFL+SE+ KPIH+Y+NSPGG VTAGL IYDTMQY+ P+ T C+GQA SM SLLLA
Sbjct: 68 AQLLFLQSESSKKPIHLYINSPGGVVTAGLGIYDTMQYVLPPVATWCVGQACSMASLLLA 127
Query: 137 SGTKGERRALPNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVI 196
+G G R ALPN+ IMIHQPSGG GQA D+ I ++I+++ +NALY KHTG I+ I
Sbjct: 128 AGAPGMRHALPNARIMIHQPSGGVQGQATDIRIQAEEILKLKGQINALYAKHTGLDIQRI 187
Query: 197 QKNMDRDYFMTPEEAKEFGIIDEVIDQ 223
+ NM+RD FMTP EAKEFGIID+V++
Sbjct: 188 ENNMERDKFMTPIEAKEFGIIDKVLEH 214
>gi|332376543|gb|AEE63411.1| unknown [Dendroctonus ponderosae]
Length = 232
Score = 272 bits (696), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 123/197 (62%), Positives = 159/197 (80%)
Query: 29 ARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPS 88
+RSF L+P+VIE + RGER+YDI+SRLLKERIIC+ GPIND + ++VAQLLFL+SE+ +
Sbjct: 21 SRSFGLVPIVIEQTGRGERSYDIYSRLLKERIICLMGPINDAMSSLIVAQLLFLQSESTN 80
Query: 89 KPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPN 148
K IHMY+NSPGG VTAGL IYDTMQYI P+ T C+GQAASM SLLLASGT G R +LPN
Sbjct: 81 KAIHMYINSPGGSVTAGLGIYDTMQYILPPVATWCVGQAASMASLLLASGTPGMRHSLPN 140
Query: 149 STIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTP 208
+ IMIHQPSGG GQA D+ I ++I+++ + +NALY +HT Q +E I++NM+RD FM+P
Sbjct: 141 ARIMIHQPSGGAQGQATDIKIQAEEIIKLKNQINALYARHTTQPLEKIERNMERDTFMSP 200
Query: 209 EEAKEFGIIDEVIDQRP 225
EA+ FGIID+++ P
Sbjct: 201 AEAQSFGIIDKILTSPP 217
>gi|319408364|emb|CBI82017.1| ATP-dependent Clp protease, proteolytic subunit [Bartonella
schoenbuchensis R1]
Length = 210
Score = 272 bits (696), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 120/194 (61%), Positives = 157/194 (80%)
Query: 31 SFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKP 90
+ +L+PMV+E ++RGERAYDIFSRLLKERII INGP+ D A +V AQLLFLE+ENP K
Sbjct: 8 ALNLVPMVVEQTNRGERAYDIFSRLLKERIIFINGPVEDGMAMLVCAQLLFLEAENPKKE 67
Query: 91 IHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNST 150
I +Y+NSPGG VT+G+AIYDTMQ+IR P++T+C+GQAASMGSLLL +G KG R +LPN+
Sbjct: 68 ISLYINSPGGVVTSGMAIYDTMQFIRPPVSTLCMGQAASMGSLLLTAGAKGHRFSLPNAR 127
Query: 151 IMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEE 210
IM+HQPSGG+ GQ D+ H + I+++ LN +Y +HTGQ E+I+K +DRD+FMT EE
Sbjct: 128 IMVHQPSGGFQGQVSDIERHAQDIIKMKQRLNEIYVQHTGQDYEIIEKTLDRDHFMTAEE 187
Query: 211 AKEFGIIDEVIDQR 224
+K FG+ID+VI R
Sbjct: 188 SKNFGLIDDVIQYR 201
>gi|392382084|ref|YP_005031281.1| ATP-dependent Clp protease proteolytic subunit [Azospirillum
brasilense Sp245]
gi|356877049|emb|CCC97850.1| ATP-dependent Clp protease proteolytic subunit [Azospirillum
brasilense Sp245]
Length = 211
Score = 272 bits (696), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 124/193 (64%), Positives = 160/193 (82%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMVIE ++RGERAYDI+SRLLKERII + G +ND A ++ +QLLFLESENPSK I
Sbjct: 10 ALVPMVIEQTNRGERAYDIYSRLLKERIIFLIGGVNDAVASLICSQLLFLESENPSKDIA 69
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
+Y+NSPGG V+AGLAIYDTMQYIR ++T+C+GQAASMGSLLLA+G G+R +LPNS IM
Sbjct: 70 LYINSPGGYVSAGLAIYDTMQYIRPQVSTVCMGQAASMGSLLLAAGAPGKRFSLPNSRIM 129
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQPSGG GQA D+ I ++I+++ LN +Y KHTGQS++ I+ M+RD FM+PEEAK
Sbjct: 130 IHQPSGGAQGQASDIEIQAQEILKLRSRLNDIYVKHTGQSLDTIEAAMERDKFMSPEEAK 189
Query: 213 EFGIIDEVIDQRP 225
FG+IDEV+++RP
Sbjct: 190 AFGLIDEVVEKRP 202
>gi|395784427|ref|ZP_10464265.1| ATP-dependent Clp protease proteolytic subunit [Bartonella
melophagi K-2C]
gi|395423677|gb|EJF89871.1| ATP-dependent Clp protease proteolytic subunit [Bartonella
melophagi K-2C]
Length = 210
Score = 272 bits (696), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 120/194 (61%), Positives = 158/194 (81%)
Query: 31 SFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKP 90
+ +L+PMV+E ++RGERAYDIFSRLLKERII INGP+ D A +V AQLLFLE+ENP K
Sbjct: 8 ALNLVPMVVEQTNRGERAYDIFSRLLKERIIFINGPVEDGMAMLVCAQLLFLEAENPKKE 67
Query: 91 IHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNST 150
I +Y+NSPGG VT+G+AIYDTMQ+IR P++T+C+GQAASMGSLLL +G KG R +LPN+
Sbjct: 68 ISLYINSPGGVVTSGMAIYDTMQFIRPPVSTLCMGQAASMGSLLLTAGAKGHRFSLPNAR 127
Query: 151 IMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEE 210
IM+HQPSGG+ GQ D+ H + I+++ LN +Y +HTGQ E+I+K +DRD+FMT EE
Sbjct: 128 IMVHQPSGGFQGQVSDIERHAQDIIKMKRRLNEIYVQHTGQDYEIIEKTLDRDHFMTAEE 187
Query: 211 AKEFGIIDEVIDQR 224
+K+FG+ID+VI R
Sbjct: 188 SKKFGLIDDVIQYR 201
>gi|194595677|gb|ACF77120.1| ATP-dependent Clp protease proteolytic subunit [Azospirillum
brasilense]
Length = 210
Score = 272 bits (696), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 124/193 (64%), Positives = 160/193 (82%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMVIE ++RGERAYDI+SRLLKERII + G +ND A ++ +QLLFLESENPSK I
Sbjct: 10 ALVPMVIEQTNRGERAYDIYSRLLKERIIFLIGGVNDAVASLICSQLLFLESENPSKDIA 69
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
+Y+NSPGG V+AGLAIYDTMQYIR ++T+C+GQAASMGSLLLA+G G+R +LPNS IM
Sbjct: 70 LYINSPGGYVSAGLAIYDTMQYIRPQVSTVCMGQAASMGSLLLAAGAPGKRFSLPNSRIM 129
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQPSGG GQA D+ I ++I+++ LN +Y KHTGQS++ I+ M+RD FM+PEEAK
Sbjct: 130 IHQPSGGAQGQASDIEIQAQEILKLRSRLNDIYVKHTGQSLDTIEAAMERDKFMSPEEAK 189
Query: 213 EFGIIDEVIDQRP 225
FG+IDEV+++RP
Sbjct: 190 AFGLIDEVVEKRP 202
>gi|365855578|ref|ZP_09395623.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Acetobacteraceae bacterium AT-5844]
gi|363719005|gb|EHM02324.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Acetobacteraceae bacterium AT-5844]
Length = 218
Score = 272 bits (695), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 123/192 (64%), Positives = 158/192 (82%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+LIPMVIE ++RGER++DI+SRLLKERII + GPI D A ++ AQLLFLESENP+K I
Sbjct: 13 TLIPMVIEQTARGERSFDIYSRLLKERIIFLTGPIFDQVASLICAQLLFLESENPNKDIA 72
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
Y+NSPGG VTAGLA+YDTMQYIR+P++T+CLG AAS GSLLL +G KG+R ALPNS +M
Sbjct: 73 FYINSPGGVVTAGLAMYDTMQYIRAPVSTVCLGMAASAGSLLLTAGEKGKRFALPNSQVM 132
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQPSGG GQA D+ I ++I++ + LN +Y +HTGQ IE I+KNM+RD ++T EEAK
Sbjct: 133 IHQPSGGAQGQATDIAIQAREILKTRERLNKIYVQHTGQPIEEIEKNMERDTYLTAEEAK 192
Query: 213 EFGIIDEVIDQR 224
FG+ID+V++QR
Sbjct: 193 AFGLIDQVVEQR 204
>gi|395786089|ref|ZP_10465817.1| ATP-dependent Clp protease proteolytic subunit [Bartonella tamiae
Th239]
gi|423717017|ref|ZP_17691207.1| ATP-dependent Clp protease proteolytic subunit [Bartonella tamiae
Th307]
gi|395424547|gb|EJF90734.1| ATP-dependent Clp protease proteolytic subunit [Bartonella tamiae
Th239]
gi|395427806|gb|EJF93889.1| ATP-dependent Clp protease proteolytic subunit [Bartonella tamiae
Th307]
Length = 210
Score = 271 bits (694), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 121/197 (61%), Positives = 158/197 (80%)
Query: 31 SFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKP 90
+ SL+PMV+E ++RGERAYDIFSRLLKERII INGP+ D+ A +V AQLLFLE+ENP+K
Sbjct: 8 ALSLVPMVVEQTNRGERAYDIFSRLLKERIIFINGPVEDNMAMLVCAQLLFLEAENPTKE 67
Query: 91 IHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNST 150
I +Y+NSPGG VT+G+AIYDTMQ+IR ++T+C+GQAASMGSLLL +G KG R ALPN+
Sbjct: 68 ISLYINSPGGVVTSGMAIYDTMQFIRPAVSTLCMGQAASMGSLLLTAGAKGHRFALPNAR 127
Query: 151 IMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEE 210
IM+HQPSGG+ GQA D+ H + I+++ LN +Y +HTGQ E I+ +DRD+FMT EE
Sbjct: 128 IMVHQPSGGFQGQASDIERHAQDIIKMKRRLNEIYVQHTGQKYETIEATLDRDHFMTAEE 187
Query: 211 AKEFGIIDEVIDQRPMA 227
+K FG+ID+V+ R A
Sbjct: 188 SKAFGLIDDVVQYRTEA 204
>gi|195578155|ref|XP_002078931.1| GD23683 [Drosophila simulans]
gi|194190940|gb|EDX04516.1| GD23683 [Drosophila simulans]
Length = 253
Score = 271 bits (694), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 132/219 (60%), Positives = 164/219 (74%), Gaps = 7/219 (3%)
Query: 12 SMATKFLQLSKPSAQI-----SARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGP 66
+ T+FLQ+S SAQ S R+ +LIPMV+E + RGERAYDIFSRLLKERIIC+ G
Sbjct: 4 TAVTRFLQIS--SAQCGGRANSVRNINLIPMVVEQTGRGERAYDIFSRLLKERIICLMGN 61
Query: 67 INDDTAHVVVAQLLFLESENPSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQ 126
I DD + VVAQLLFL+SEN +KPIH+Y+NSPGG VTAGLAIYDTMQY++ PI T C+GQ
Sbjct: 62 ITDDISSTVVAQLLFLQSENVNKPIHLYINSPGGVVTAGLAIYDTMQYVKPPIATWCVGQ 121
Query: 127 AASMGSLLLASGTKGERRALPNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYC 186
A SMGSLLLA+G G R +LPN+ IMIHQPSGG GQA D+ IH ++I+++ L +Y
Sbjct: 122 ACSMGSLLLAAGAPGMRYSLPNARIMIHQPSGGAQGQATDILIHAEEIIKIKRQLTNIYV 181
Query: 187 KHTGQSIEVIQKNMDRDYFMTPEEAKEFGIIDEVIDQRP 225
KH + E + M+RD+FMTPEEAK GIID V++ P
Sbjct: 182 KHAKNTYEEMCGRMERDHFMTPEEAKVLGIIDHVLEHPP 220
>gi|42520204|ref|NP_966119.1| ATP-dependent Clp protease proteolytic subunit [Wolbachia
endosymbiont of Drosophila melanogaster]
gi|60389690|sp|Q73I59.1|CLPP_WOLPM RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|42409942|gb|AAS14053.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Wolbachia
endosymbiont of Drosophila melanogaster]
Length = 208
Score = 271 bits (694), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 127/193 (65%), Positives = 159/193 (82%)
Query: 32 FSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPI 91
+LIP+V+E +SRGERAYDI+SRL+KERII + GPI D+ A V+VAQLLFLESENP+K I
Sbjct: 1 MTLIPIVVEQTSRGERAYDIYSRLVKERIIFVTGPIEDNMASVIVAQLLFLESENPNKDI 60
Query: 92 HMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTI 151
MY+NSPGG VTAGL+IYDTMQYI ++T+C+GQAASMGSLLLA+GTKG+R +LP+S I
Sbjct: 61 CMYINSPGGVVTAGLSIYDTMQYINPDVSTLCIGQAASMGSLLLAAGTKGKRYSLPHSRI 120
Query: 152 MIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEA 211
MIHQPSGGY GQA D+ IH +I+RV LN +Y KHTG S++ I+ M+RD FM PEEA
Sbjct: 121 MIHQPSGGYHGQATDIEIHANEILRVKKKLNQIYEKHTGNSLKKIEGMMERDKFMDPEEA 180
Query: 212 KEFGIIDEVIDQR 224
++ G+ID VI +R
Sbjct: 181 RKIGLIDRVIAER 193
>gi|195339773|ref|XP_002036491.1| GM18225 [Drosophila sechellia]
gi|116811667|emb|CAL26000.1| CG5045 [Drosophila simulans]
gi|194130371|gb|EDW52414.1| GM18225 [Drosophila sechellia]
Length = 253
Score = 271 bits (694), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 132/219 (60%), Positives = 164/219 (74%), Gaps = 7/219 (3%)
Query: 12 SMATKFLQLSKPSAQI-----SARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGP 66
+ T+FLQ+S SAQ S R+ +LIPMV+E + RGERAYDIFSRLLKERIIC+ G
Sbjct: 4 TAVTRFLQIS--SAQCGGRANSVRNINLIPMVVEQTGRGERAYDIFSRLLKERIICLMGN 61
Query: 67 INDDTAHVVVAQLLFLESENPSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQ 126
I DD + VVAQLLFL+SEN +KPIH+Y+NSPGG VTAGLAIYDTMQY++ PI T C+GQ
Sbjct: 62 ITDDISSTVVAQLLFLQSENVNKPIHLYINSPGGVVTAGLAIYDTMQYVKPPIATWCVGQ 121
Query: 127 AASMGSLLLASGTKGERRALPNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYC 186
A SMGSLLLA+G G R +LPN+ IMIHQPSGG GQA D+ IH ++I+++ L +Y
Sbjct: 122 ACSMGSLLLAAGAPGMRYSLPNARIMIHQPSGGAQGQATDILIHAEEIIKIKRQLTNIYV 181
Query: 187 KHTGQSIEVIQKNMDRDYFMTPEEAKEFGIIDEVIDQRP 225
KH + E + M+RD+FMTPEEAK GIID V++ P
Sbjct: 182 KHAKNTYEEMCGRMERDHFMTPEEAKVLGIIDHVLEHPP 220
>gi|209885039|ref|YP_002288896.1| Clp protease [Oligotropha carboxidovorans OM5]
gi|337741329|ref|YP_004633057.1| ATP-dependent Clp protease proteolytic subunit ClpP [Oligotropha
carboxidovorans OM5]
gi|386030345|ref|YP_005951120.1| ATP-dependent Clp protease proteolytic subunit ClpP [Oligotropha
carboxidovorans OM4]
gi|226706464|sp|B6JGU7.1|CLPP_OLICO RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|209873235|gb|ACI93031.1| Clp protease [Oligotropha carboxidovorans OM5]
gi|336095413|gb|AEI03239.1| ATP-dependent Clp protease proteolytic subunit ClpP [Oligotropha
carboxidovorans OM4]
gi|336098993|gb|AEI06816.1| ATP-dependent Clp protease proteolytic subunit ClpP [Oligotropha
carboxidovorans OM5]
Length = 210
Score = 271 bits (694), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 120/193 (62%), Positives = 159/193 (82%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E ++RGERAYDIFSRLLKERII + GP+ D + ++VAQLLFLE+ENP K I
Sbjct: 10 NLVPMVVEQTNRGERAYDIFSRLLKERIIFVTGPVEDGMSTLIVAQLLFLEAENPKKEIS 69
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
MY+NSPGG VT+GLAIYDTMQ+IR P++T+C GQAASMGSLLLA+G K R +LPNS IM
Sbjct: 70 MYINSPGGVVTSGLAIYDTMQFIRPPVSTLCTGQAASMGSLLLAAGEKDMRFSLPNSRIM 129
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
+HQPSGG+ GQA D+ +H ++I+ + LN +Y KHTGQS + I+ ++RD F+T E+A+
Sbjct: 130 VHQPSGGFQGQATDIMLHAQEILNLKKRLNEIYVKHTGQSYQAIEDALERDNFLTAEKAR 189
Query: 213 EFGIIDEVIDQRP 225
+FGI+D+VID+RP
Sbjct: 190 DFGIVDKVIDKRP 202
>gi|116243161|sp|Q1RJH2.2|CLPP_RICBR RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
Length = 227
Score = 271 bits (694), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 123/199 (61%), Positives = 160/199 (80%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
S +P+VIE +SRGERAYDI+SRLLKERII + GPI D A+++ AQLLFLE+ENP K I+
Sbjct: 24 SYVPIVIEQTSRGERAYDIYSRLLKERIIFVCGPIEDHMANLITAQLLFLEAENPEKDIY 83
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
MY+NSPGG VTAGLAIYDTMQYI+ + T+C+GQA SMGS LL G KG R +LP+S +M
Sbjct: 84 MYINSPGGVVTAGLAIYDTMQYIKPKVATLCIGQACSMGSFLLCGGEKGMRYSLPHSRVM 143
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQPSGGY GQA D+ IH ++ +++ LN+LY KHTGQ ++ ++K+M+RD FM+PEEAK
Sbjct: 144 IHQPSGGYRGQATDIEIHAQETLKIKKILNSLYSKHTGQDVKHVEKSMERDNFMSPEEAK 203
Query: 213 EFGIIDEVIDQRPMALVTD 231
+FGIID++I R + L+ D
Sbjct: 204 KFGIIDKIITHRDIKLLKD 222
>gi|198461900|ref|XP_001352265.2| GA18618 [Drosophila pseudoobscura pseudoobscura]
gi|198142480|gb|EAL29303.2| GA18618 [Drosophila pseudoobscura pseudoobscura]
Length = 253
Score = 271 bits (694), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 137/247 (55%), Positives = 172/247 (69%), Gaps = 14/247 (5%)
Query: 4 MRNLLSRTSMATKFLQ---LSKPSAQISARSFSLIPMVIEHSSRGERAYDIFSRLLKERI 60
+RN +SR LQ L + S+RS +LIPMV+E + RGERAYDIFSRLLKERI
Sbjct: 2 LRNTISR------LLQNNSLKCVTGTTSSRSINLIPMVVEQTGRGERAYDIFSRLLKERI 55
Query: 61 ICINGPINDDTAHVVVAQLLFLESENPSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPIN 120
IC+ G I DD + VVAQLLFL+SEN +KPIH+Y+NSPGG VTAGLAIYDTMQY++ PI
Sbjct: 56 ICLMGNITDDISSTVVAQLLFLQSENVNKPIHLYINSPGGVVTAGLAIYDTMQYVKPPIA 115
Query: 121 TICLGQAASMGSLLLASGTKGERRALPNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDA 180
T C+GQA SMGSLLLA+G G R +LPN+ IMIHQPSGG GQA D+ IH ++I+++
Sbjct: 116 TWCVGQACSMGSLLLAAGAPGMRYSLPNARIMIHQPSGGAQGQATDILIHAEEIIKIKRQ 175
Query: 181 LNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKEFGIIDEVIDQRPMALVTDAVGREGKEG 240
L ++Y KH S E + + M+RD+FMTP+EAK GIID V++ P + V G
Sbjct: 176 LTSIYVKHAKNSYEEMCQRMERDHFMTPDEAKVLGIIDHVLEHPP-----ETVSDSGPTS 230
Query: 241 KEGKEKG 247
GK G
Sbjct: 231 DGGKTAG 237
>gi|58696873|ref|ZP_00372388.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Wolbachia
endosymbiont of Drosophila simulans]
gi|58699505|ref|ZP_00374232.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Wolbachia
endosymbiont of Drosophila ananassae]
gi|225630255|ref|YP_002727046.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Wolbachia sp.
wRi]
gi|254763810|sp|C0R2W3.1|CLPP_WOLWR RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|58533978|gb|EAL58250.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Wolbachia
endosymbiont of Drosophila ananassae]
gi|58536916|gb|EAL60096.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Wolbachia
endosymbiont of Drosophila simulans]
gi|225592236|gb|ACN95255.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Wolbachia sp.
wRi]
Length = 208
Score = 271 bits (694), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 127/193 (65%), Positives = 158/193 (81%)
Query: 32 FSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPI 91
+LIP+V+E +SRGERAYDI+SRL+KERII + GPI D+ A V+VAQLLFLESENP K I
Sbjct: 1 MTLIPIVVEQTSRGERAYDIYSRLVKERIIFVTGPIEDNMASVIVAQLLFLESENPDKDI 60
Query: 92 HMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTI 151
MY+NSPGG VTAGL+IYDTMQYI ++T+C+GQAASMGSLLLA+GTKG+R +LP+S I
Sbjct: 61 CMYINSPGGVVTAGLSIYDTMQYINPDVSTLCIGQAASMGSLLLAAGTKGKRYSLPHSRI 120
Query: 152 MIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEA 211
MIHQPSGGY GQA D+ IH +I+RV LN +Y KHTG S++ I+ M+RD FM PEEA
Sbjct: 121 MIHQPSGGYHGQATDIEIHANEILRVKKKLNQIYEKHTGNSLKKIEGMMERDKFMDPEEA 180
Query: 212 KEFGIIDEVIDQR 224
++ G+ID VI +R
Sbjct: 181 RKIGLIDRVIAER 193
>gi|452964828|gb|EME69861.1| protease subunit of ATP-dependent Clp protease [Magnetospirillum
sp. SO-1]
Length = 213
Score = 271 bits (693), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 122/195 (62%), Positives = 160/195 (82%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E ++RGER+YDI+SRLLKERII + G + D+ A ++ AQLLFLESENPSK I
Sbjct: 13 TLVPMVVEQTNRGERSYDIYSRLLKERIIFLTGQVYDEVASLICAQLLFLESENPSKDIA 72
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
Y+NSPGG VT+GLAIYDTMQY+R ++T+C+GQAASMGSLL+ +G KG+R +LPNS IM
Sbjct: 73 FYINSPGGVVTSGLAIYDTMQYVRPAVSTVCIGQAASMGSLLMTAGEKGKRFSLPNSRIM 132
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
+HQPSGG GQA D+ I ++I+ + LN +Y +HTGQ +EVI+K M+RD FMT EEAK
Sbjct: 133 VHQPSGGAQGQATDIEIQAREILALRARLNNIYVEHTGQPLEVIEKVMERDKFMTAEEAK 192
Query: 213 EFGIIDEVIDQRPMA 227
EFG+IDEV+++RP A
Sbjct: 193 EFGLIDEVVNKRPAA 207
>gi|91205226|ref|YP_537581.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia bellii
RML369-C]
gi|157827437|ref|YP_001496501.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia bellii
OSU 85-389]
gi|91068770|gb|ABE04492.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia bellii
RML369-C]
gi|157802741|gb|ABV79464.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia bellii
OSU 85-389]
Length = 264
Score = 271 bits (693), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 123/199 (61%), Positives = 160/199 (80%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
S +P+VIE +SRGERAYDI+SRLLKERII + GPI D A+++ AQLLFLE+ENP K I+
Sbjct: 61 SYVPIVIEQTSRGERAYDIYSRLLKERIIFVCGPIEDHMANLITAQLLFLEAENPEKDIY 120
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
MY+NSPGG VTAGLAIYDTMQYI+ + T+C+GQA SMGS LL G KG R +LP+S +M
Sbjct: 121 MYINSPGGVVTAGLAIYDTMQYIKPKVATLCIGQACSMGSFLLCGGEKGMRYSLPHSRVM 180
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQPSGGY GQA D+ IH ++ +++ LN+LY KHTGQ ++ ++K+M+RD FM+PEEAK
Sbjct: 181 IHQPSGGYRGQATDIEIHAQETLKIKKILNSLYSKHTGQDVKHVEKSMERDNFMSPEEAK 240
Query: 213 EFGIIDEVIDQRPMALVTD 231
+FGIID++I R + L+ D
Sbjct: 241 KFGIIDKIITHRDIKLLKD 259
>gi|195146760|ref|XP_002014352.1| GL19149 [Drosophila persimilis]
gi|194106305|gb|EDW28348.1| GL19149 [Drosophila persimilis]
Length = 253
Score = 271 bits (693), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 137/247 (55%), Positives = 172/247 (69%), Gaps = 14/247 (5%)
Query: 4 MRNLLSRTSMATKFLQ---LSKPSAQISARSFSLIPMVIEHSSRGERAYDIFSRLLKERI 60
+RN +SR LQ L + S+RS +LIPMV+E + RGERAYDIFSRLLKERI
Sbjct: 2 LRNTISR------LLQNNSLKCVTGTTSSRSINLIPMVVEQTGRGERAYDIFSRLLKERI 55
Query: 61 ICINGPINDDTAHVVVAQLLFLESENPSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPIN 120
IC+ G I DD + VVAQLLFL+SEN +KPIH+Y+NSPGG VTAGLAIYDTMQY++ PI
Sbjct: 56 ICLMGNITDDISSTVVAQLLFLQSENVNKPIHLYINSPGGVVTAGLAIYDTMQYVKPPIA 115
Query: 121 TICLGQAASMGSLLLASGTKGERRALPNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDA 180
T C+GQA SMGSLLLA+G G R +LPN+ IMIHQPSGG GQA D+ IH ++I+++
Sbjct: 116 TWCVGQACSMGSLLLAAGAPGMRYSLPNARIMIHQPSGGAQGQATDILIHAEEIIKIKRQ 175
Query: 181 LNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKEFGIIDEVIDQRPMALVTDAVGREGKEG 240
L ++Y KH S E + + M+RD+FMTP+EAK GIID V++ P + V G
Sbjct: 176 LTSIYVKHAKNSYEEMCQRMERDHFMTPDEAKILGIIDHVLEHPP-----ETVSDSGPTS 230
Query: 241 KEGKEKG 247
GK G
Sbjct: 231 DGGKTAG 237
>gi|350409849|ref|XP_003488865.1| PREDICTED: putative ATP-dependent Clp protease proteolytic subunit,
mitochondrial-like [Bombus impatiens]
Length = 242
Score = 271 bits (693), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 126/210 (60%), Positives = 159/210 (75%), Gaps = 1/210 (0%)
Query: 17 FLQLSKPSAQISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVV 76
LQ+ ++ +R + IP+V+E S RGERAYDI+SRLLKERIIC+ GPI D+ + VV+
Sbjct: 9 LLQIFGSGQKVCSRYLNFIPVVVEQSGRGERAYDIYSRLLKERIICLMGPITDNVSSVVI 68
Query: 77 AQLLFLESENPSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLA 136
AQLLFL+SEN PIHMY+NSPGG VTAGL IYDTMQY+ P+ T C+GQA SM SLLLA
Sbjct: 69 AQLLFLQSENSKNPIHMYINSPGGSVTAGLGIYDTMQYVLPPVATWCVGQACSMASLLLA 128
Query: 137 SGTKGERRALPNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVI 196
+GTKG R +LPN+ IM HQPSGG SGQA D+ I +I+++ +N LY KHTG +E I
Sbjct: 129 AGTKGMRHSLPNARIMTHQPSGGVSGQATDIQIQALEILKLKKQINHLYVKHTGLDLEKI 188
Query: 197 QKNMDRDYFMTPEEAKEFGIIDEVIDQRPM 226
++ M+RD FM+P EAKEFGIID+V+ PM
Sbjct: 189 ERCMERDNFMSPTEAKEFGIIDKVLSH-PM 217
>gi|71083579|ref|YP_266298.1| ATP-dependent Clp protease proteolytic subunit [Candidatus
Pelagibacter ubique HTCC1062]
gi|91762000|ref|ZP_01263965.1| ATP-dependent Clp protease proteolytic subunit [Candidatus
Pelagibacter ubique HTCC1002]
gi|115311789|sp|Q4FM94.1|CLPP_PELUB RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|71062692|gb|AAZ21695.1| ATP-dependent Clp protease proteolytic subunit [Candidatus
Pelagibacter ubique HTCC1062]
gi|91717802|gb|EAS84452.1| ATP-dependent Clp protease proteolytic subunit [Candidatus
Pelagibacter ubique HTCC1002]
Length = 203
Score = 271 bits (693), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 119/192 (61%), Positives = 159/192 (82%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E S++GERAYDI+SRLLKERII + GPIND+ A +V AQLLFLESE+P K I+
Sbjct: 11 TLVPMVVEQSNKGERAYDIYSRLLKERIIFLVGPINDNVASLVTAQLLFLESEDPKKEIN 70
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
+Y+NSPGG VTAGL IYDTMQYI+ ++T+C+GQAASMGS LLA+G KG+R +LPNS IM
Sbjct: 71 LYINSPGGLVTAGLGIYDTMQYIKPDVSTLCIGQAASMGSFLLAAGKKGKRFSLPNSRIM 130
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
+HQPS G+ GQA D+ IH +++ + LN +Y KHTG+S++ ++K ++RD FMTP+ AK
Sbjct: 131 VHQPSAGFQGQATDIEIHANEVLALKKRLNEIYSKHTGKSVDDVKKALERDNFMTPDTAK 190
Query: 213 EFGIIDEVIDQR 224
EFG+IDEV++ R
Sbjct: 191 EFGLIDEVVENR 202
>gi|23014984|ref|ZP_00054776.1| COG0740: Protease subunit of ATP-dependent Clp proteases
[Magnetospirillum magnetotacticum MS-1]
Length = 213
Score = 271 bits (693), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 122/195 (62%), Positives = 160/195 (82%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E ++RGER+YDI+SRLLKERI+ + G + D+ A ++ AQLLFLESENPSK I
Sbjct: 13 TLVPMVVEQTNRGERSYDIYSRLLKERIVFLTGQVYDEVASLICAQLLFLESENPSKDIS 72
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
Y+NSPGG VT+GLAIYDTMQYIR ++T+C+GQAASMGSLL+ +G KG+R +LPNS IM
Sbjct: 73 FYINSPGGVVTSGLAIYDTMQYIRPAVSTLCIGQAASMGSLLMTAGEKGKRFSLPNSRIM 132
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
+HQPSGG GQA D+ I ++I+ + LN +Y HTGQ +EVI+K M+RD FMT EEAK
Sbjct: 133 VHQPSGGAQGQATDIEIQAREILALRARLNNIYVDHTGQPLEVIEKVMERDKFMTAEEAK 192
Query: 213 EFGIIDEVIDQRPMA 227
EFG+IDEV+++RP+A
Sbjct: 193 EFGLIDEVVNKRPVA 207
>gi|156362486|ref|XP_001625808.1| predicted protein [Nematostella vectensis]
gi|156212658|gb|EDO33708.1| predicted protein [Nematostella vectensis]
Length = 228
Score = 271 bits (692), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 125/219 (57%), Positives = 167/219 (76%), Gaps = 1/219 (0%)
Query: 7 LLSRTSMATKFLQLSKPSAQISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGP 66
+ +R + +FL+ + R F L+PMVIE + RGERAYDIFSRLLKERI+C+ GP
Sbjct: 1 MAARLRSSARFLRHVRGFHTSCVRRF-LVPMVIESTGRGERAYDIFSRLLKERIVCVMGP 59
Query: 67 INDDTAHVVVAQLLFLESENPSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQ 126
+ D+T+ +V+AQLLFL+SE+ PIHMY+NSPGG VT+GL IYDTMQYI+ PI+T C+GQ
Sbjct: 60 VTDETSSLVIAQLLFLQSESSKLPIHMYINSPGGTVTSGLGIYDTMQYIQPPISTWCVGQ 119
Query: 127 AASMGSLLLASGTKGERRALPNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYC 186
A SMGSLLLA+G+ G R ALP+S IM+HQP GG SGQA D+ I ++I+++ LN +Y
Sbjct: 120 ACSMGSLLLAAGSPGLRHALPHSRIMVHQPHGGASGQATDIAIQAEEILKLKRVLNGIYV 179
Query: 187 KHTGQSIEVIQKNMDRDYFMTPEEAKEFGIIDEVIDQRP 225
KHTG+ +E I++ ++RD FM+PEEAKEFG+ID V+ P
Sbjct: 180 KHTGKDMETIEQALERDKFMSPEEAKEFGLIDRVLAHPP 218
>gi|348673459|gb|EGZ13278.1| hypothetical protein PHYSODRAFT_351880 [Phytophthora sojae]
Length = 226
Score = 271 bits (692), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 123/192 (64%), Positives = 154/192 (80%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
SL+PMV+E S RGER +DI+SRLLKERI+ ++GP+NDD A +V AQLLFLESENP K ++
Sbjct: 26 SLVPMVLEQSPRGERVFDIYSRLLKERIVFVHGPVNDDMASLVTAQLLFLESENPEKDVY 85
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
MY+NSPGG V++GLAIYDTMQYI+ +NT+C+GQAASMGSLLLA GT G R ALPNS IM
Sbjct: 86 MYINSPGGIVSSGLAIYDTMQYIQPKVNTLCMGQAASMGSLLLAGGTPGCRSALPNSRIM 145
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQPSGG G A D+ I ++I+++ LN LY HTG+ ++VI++ MDRD FM P EA+
Sbjct: 146 IHQPSGGAQGMASDIAIQAEEIIKLRARLNGLYASHTGKPLKVIEQAMDRDLFMDPREAQ 205
Query: 213 EFGIIDEVIDQR 224
EFGIID +I R
Sbjct: 206 EFGIIDSIIANR 217
>gi|114771109|ref|ZP_01448549.1| Protease subunit of ATP-dependent Clp protease [Rhodobacterales
bacterium HTCC2255]
gi|114548391|gb|EAU51277.1| Protease subunit of ATP-dependent Clp protease [alpha
proteobacterium HTCC2255]
Length = 204
Score = 271 bits (692), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 118/192 (61%), Positives = 159/192 (82%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E +SRGER++DIFSRLLKERII ++GP++D + ++VAQLLFLE+ENP K I
Sbjct: 11 TLVPMVVEQTSRGERSFDIFSRLLKERIIFVSGPVHDGMSTLIVAQLLFLEAENPKKDIS 70
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
MY+NSPGG VTAG+AIYDTMQYIR ++T+C+GQAASMGSLLLA+G KG R ALPN+ +M
Sbjct: 71 MYINSPGGVVTAGMAIYDTMQYIRPKVSTLCVGQAASMGSLLLAAGEKGMRFALPNARVM 130
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
+HQPSGG+SGQA D+ +H K+I+ + D LN +Y KH Q + ++ +DRD FMT EEAK
Sbjct: 131 VHQPSGGFSGQASDIALHAKEILELKDRLNKIYVKHCSQKLSTVEDALDRDNFMTAEEAK 190
Query: 213 EFGIIDEVIDQR 224
++G+IDE++ +R
Sbjct: 191 DWGLIDEIVQKR 202
>gi|6685315|sp|Q9X6W8.1|CLPP_AZOBR RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|5002357|gb|AAD37435.1|AF150957_2 heat-shock protein ClpP [Azospirillum brasilense]
Length = 210
Score = 271 bits (692), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 123/193 (63%), Positives = 159/193 (82%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMVIE ++RGER YDI+SRLLKERII + G +ND A ++ +QLLFLESENPSK I
Sbjct: 10 ALVPMVIEQTNRGERGYDIYSRLLKERIIFLIGGVNDAVASLICSQLLFLESENPSKDIA 69
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
+Y+NSPGG V+AGLAIYDTMQYIR ++T+C+GQAASMGSLLLA+G G+R +LPNS IM
Sbjct: 70 LYINSPGGYVSAGLAIYDTMQYIRPQVSTVCMGQAASMGSLLLAAGAPGKRFSLPNSRIM 129
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQPSGG GQA D+ I ++I+++ LN +Y KHTGQS++ I+ M+RD FM+PEEAK
Sbjct: 130 IHQPSGGAQGQASDIEIQAQEILKLRSRLNDIYVKHTGQSLDTIEAXMERDKFMSPEEAK 189
Query: 213 EFGIIDEVIDQRP 225
FG+IDEV+++RP
Sbjct: 190 AFGLIDEVVEKRP 202
>gi|444308443|ref|ZP_21144088.1| ATP-dependent Clp protease proteolytic subunit [Ochrobactrum
intermedium M86]
gi|443488026|gb|ELT50783.1| ATP-dependent Clp protease proteolytic subunit [Ochrobactrum
intermedium M86]
Length = 209
Score = 270 bits (691), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 118/192 (61%), Positives = 158/192 (82%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E ++RGERAYDIFSRLLKERII +NGP+ D + +V AQLLFLE+ENP K I+
Sbjct: 10 NLVPMVVEQTNRGERAYDIFSRLLKERIIFVNGPVEDGMSMLVCAQLLFLEAENPKKEIN 69
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
MY+NSPGG VT+G+AIYDTMQ+IR P++T+C+GQAASMGSLLL +G G+R ALPN+ IM
Sbjct: 70 MYINSPGGVVTSGMAIYDTMQFIRPPVSTLCMGQAASMGSLLLTAGATGQRYALPNARIM 129
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
+HQPSGG+ GQA D+ H + I+++ LN +Y KHTG+ E I++ +DRD+FMT +EA
Sbjct: 130 VHQPSGGFQGQASDIERHAQDIIKMKRRLNEIYVKHTGRDYETIERTLDRDHFMTAQEAL 189
Query: 213 EFGIIDEVIDQR 224
EFG+ID+V++ R
Sbjct: 190 EFGLIDKVVEAR 201
>gi|404319233|ref|ZP_10967166.1| ATP-dependent Clp protease proteolytic subunit [Ochrobactrum
anthropi CTS-325]
Length = 209
Score = 270 bits (691), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 118/192 (61%), Positives = 158/192 (82%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E ++RGERAYDIFSRLLKERII +NGP+ D + +V AQLLFLE+ENP K I+
Sbjct: 10 NLVPMVVEQTNRGERAYDIFSRLLKERIIFVNGPVEDGMSMLVCAQLLFLEAENPKKEIN 69
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
MY+NSPGG VT+G+AIYDTMQ+IR P++T+C+GQAASMGSLLL +G G+R ALPN+ IM
Sbjct: 70 MYINSPGGVVTSGMAIYDTMQFIRPPVSTLCMGQAASMGSLLLTAGATGQRYALPNARIM 129
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
+HQPSGG+ GQA D+ H + I+++ LN +Y KHTG+ E I++ +DRD+FMT +EA
Sbjct: 130 VHQPSGGFQGQASDIERHAQDIIKMKRRLNEIYVKHTGRDYETIERTLDRDHFMTAQEAL 189
Query: 213 EFGIIDEVIDQR 224
EFG+ID+V++ R
Sbjct: 190 EFGLIDKVVESR 201
>gi|372270957|ref|ZP_09507005.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Marinobacterium stanieri S30]
Length = 211
Score = 270 bits (691), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 118/191 (61%), Positives = 156/191 (81%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
L+PMV+E SSRGERAYDI+SRLLKER+I + GP+ D A+++VAQLLFLE+ENP K IH+
Sbjct: 17 LVPMVVEQSSRGERAYDIYSRLLKERVIFLVGPVEDHMANLIVAQLLFLEAENPDKDIHL 76
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VTAG+AIYDTMQ+I+ ++T+C+GQAASMG+ LLA G KG+R ALPN+ +MI
Sbjct: 77 YINSPGGSVTAGMAIYDTMQFIKPDVSTMCIGQAASMGAFLLAGGAKGKRFALPNARVMI 136
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQP GGY GQA D+ IHTK+I+ + + LN L +HTGQ E + ++ DRD FM P+ A +
Sbjct: 137 HQPLGGYQGQATDIEIHTKEILSIREKLNRLLAEHTGQDFETVARDTDRDNFMDPQTAAD 196
Query: 214 FGIIDEVIDQR 224
+G+IDEV+D+R
Sbjct: 197 YGLIDEVLDRR 207
>gi|417398182|gb|JAA46124.1| Putative atp-dependent clp protease proteolytic subunit
mitochondrial [Desmodus rotundus]
Length = 273
Score = 270 bits (690), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 123/198 (62%), Positives = 161/198 (81%)
Query: 28 SARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENP 87
+AR+ LIP+V+E + RGERAYDI+SRLL+ERI+C+ GPI+D A +V+AQLLFL+SE+
Sbjct: 48 AARAIPLIPIVVEQTGRGERAYDIYSRLLRERIVCVMGPIDDSVASLVIAQLLFLQSESN 107
Query: 88 SKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALP 147
KPIHMY+NSPGG VT+GLAIYDTMQYI +PI T C+GQAASMGSLLLA+GT G R +LP
Sbjct: 108 KKPIHMYINSPGGMVTSGLAIYDTMQYILNPICTWCVGQAASMGSLLLAAGTPGMRHSLP 167
Query: 148 NSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMT 207
NS IMIHQPSGG GQA D+ I ++I+++ L ++Y KHT QS++VI+ M+RD +M+
Sbjct: 168 NSRIMIHQPSGGARGQATDIAIQAEEIMKLKKQLYSIYAKHTKQSLQVIESAMERDRYMS 227
Query: 208 PEEAKEFGIIDEVIDQRP 225
P EA+EFGI+D+V+ P
Sbjct: 228 PMEAQEFGILDKVLVHPP 245
>gi|88658316|ref|YP_507695.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Ehrlichia
chaffeensis str. Arkansas]
gi|115311357|sp|Q2GFT8.1|CLPP_EHRCR RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|88599773|gb|ABD45242.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Ehrlichia
chaffeensis str. Arkansas]
Length = 199
Score = 270 bits (690), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 126/193 (65%), Positives = 156/193 (80%)
Query: 32 FSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPI 91
+L+PMV+E +SRGERAYDI+SRLLKERII I GPI D A ++VAQL+FLESENP K I
Sbjct: 1 MTLVPMVVEQTSRGERAYDIYSRLLKERIIFITGPIEDQMASLIVAQLIFLESENPEKEI 60
Query: 92 HMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTI 151
MY+NSPGG VTAGL+IYDTMQYI+ ++T+CLGQAASMGSLLLA+G G R ALPNS I
Sbjct: 61 CMYINSPGGVVTAGLSIYDTMQYIKPKVSTLCLGQAASMGSLLLAAGEPGMRYALPNSRI 120
Query: 152 MIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEA 211
MIHQPSGG+ GQA D+ IH K+I+ + LN +Y KHTG+ + + NM+RD FM E+A
Sbjct: 121 MIHQPSGGFQGQATDIEIHAKEILDIKGRLNDIYVKHTGRDLSEVVANMERDNFMRAEKA 180
Query: 212 KEFGIIDEVIDQR 224
K+FGIID+VI++R
Sbjct: 181 KDFGIIDKVIEKR 193
>gi|153009536|ref|YP_001370751.1| ATP-dependent Clp protease proteolytic subunit [Ochrobactrum
anthropi ATCC 49188]
gi|151561424|gb|ABS14922.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Ochrobactrum
anthropi ATCC 49188]
Length = 230
Score = 270 bits (690), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 118/193 (61%), Positives = 158/193 (81%)
Query: 32 FSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPI 91
+L+PMV+E ++RGERAYDIFSRLLKERII +NGP+ D + +V AQLLFLE+ENP K I
Sbjct: 30 MNLVPMVVEQTNRGERAYDIFSRLLKERIIFVNGPVEDGMSMLVCAQLLFLEAENPKKEI 89
Query: 92 HMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTI 151
+MY+NSPGG VT+G+AIYDTMQ+IR P++T+C+GQAASMGSLLL +G G+R ALPN+ I
Sbjct: 90 NMYINSPGGVVTSGMAIYDTMQFIRPPVSTLCMGQAASMGSLLLTAGATGQRYALPNARI 149
Query: 152 MIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEA 211
M+HQPSGG+ GQA D+ H + I+++ LN +Y KHTG+ E I++ +DRD+FMT +EA
Sbjct: 150 MVHQPSGGFQGQASDIERHAQDIIKMKRRLNEIYVKHTGRDYETIERTLDRDHFMTAQEA 209
Query: 212 KEFGIIDEVIDQR 224
EFG+ID+V++ R
Sbjct: 210 LEFGLIDKVVESR 222
>gi|73987256|ref|XP_854538.1| PREDICTED: putative ATP-dependent Clp protease proteolytic subunit,
mitochondrial [Canis lupus familiaris]
Length = 273
Score = 270 bits (690), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 123/198 (62%), Positives = 160/198 (80%)
Query: 28 SARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENP 87
+AR+ LIP+V+E + RGERAYDI+SRLL+ERI+C+ GPI+D A +V+AQLLFL+SE+
Sbjct: 48 AARALPLIPIVVEQTGRGERAYDIYSRLLRERIVCVMGPIDDSVASLVIAQLLFLQSESN 107
Query: 88 SKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALP 147
KPIHMY+NSPGG VT+GLAIYDTMQYI +PI T C+GQAASMGSLLLA+GT G R +LP
Sbjct: 108 KKPIHMYINSPGGMVTSGLAIYDTMQYILNPICTWCVGQAASMGSLLLAAGTPGMRHSLP 167
Query: 148 NSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMT 207
NS IMIHQPSGG GQA D+ I ++I+++ L +Y KHT QS++VI+ M+RD +M+
Sbjct: 168 NSRIMIHQPSGGARGQATDIAIQAEEIMKLKKQLYGIYAKHTKQSLQVIESAMERDRYMS 227
Query: 208 PEEAKEFGIIDEVIDQRP 225
P EA+EFGI+D+V+ P
Sbjct: 228 PMEAQEFGILDKVLVHPP 245
>gi|239831859|ref|ZP_04680188.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Ochrobactrum
intermedium LMG 3301]
gi|239824126|gb|EEQ95694.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Ochrobactrum
intermedium LMG 3301]
Length = 230
Score = 270 bits (690), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 118/192 (61%), Positives = 158/192 (82%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E ++RGERAYDIFSRLLKERII +NGP+ D + +V AQLLFLE+ENP K I+
Sbjct: 31 NLVPMVVEQTNRGERAYDIFSRLLKERIIFVNGPVEDGMSMLVCAQLLFLEAENPKKEIN 90
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
MY+NSPGG VT+G+AIYDTMQ+IR P++T+C+GQAASMGSLLL +G G+R ALPN+ IM
Sbjct: 91 MYINSPGGVVTSGMAIYDTMQFIRPPVSTLCMGQAASMGSLLLTAGATGQRYALPNARIM 150
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
+HQPSGG+ GQA D+ H + I+++ LN +Y KHTG+ E I++ +DRD+FMT +EA
Sbjct: 151 VHQPSGGFQGQASDIERHAQDIIKMKRRLNEIYVKHTGRDYETIERTLDRDHFMTAQEAL 210
Query: 213 EFGIIDEVIDQR 224
EFG+ID+V++ R
Sbjct: 211 EFGLIDKVVEAR 222
>gi|407768974|ref|ZP_11116351.1| Protease subunit of ATP-dependent Clp proteases [Thalassospira
xiamenensis M-5 = DSM 17429]
gi|407287894|gb|EKF13373.1| Protease subunit of ATP-dependent Clp proteases [Thalassospira
xiamenensis M-5 = DSM 17429]
Length = 209
Score = 270 bits (690), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 121/199 (60%), Positives = 160/199 (80%)
Query: 27 ISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESEN 86
I A+ SL+PMV+E +SRGERAYDIFSRLLKERI+ ING ++D + ++ AQLL LESEN
Sbjct: 2 IEAQMNSLVPMVVEQTSRGERAYDIFSRLLKERIVFINGQVHDGMSSLICAQLLHLESEN 61
Query: 87 PSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRAL 146
P K I +Y+NSPGG VT+GLAIYDTMQYIR ++T+C+GQAASMGSLLL +G KG+R L
Sbjct: 62 PDKDISLYINSPGGVVTSGLAIYDTMQYIRCDVSTVCMGQAASMGSLLLMAGAKGKRYCL 121
Query: 147 PNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFM 206
PN+ +MIHQPSGG+ GQA D+ IH ++I+ + LN +Y +HTG+ ++ I+ M+RD F+
Sbjct: 122 PNARVMIHQPSGGFQGQASDIEIHAREILALRQRLNEIYVEHTGRDLKTIEDAMERDNFL 181
Query: 207 TPEEAKEFGIIDEVIDQRP 225
TP++AKEFG+IDEV+ RP
Sbjct: 182 TPDQAKEFGLIDEVVTSRP 200
>gi|426401095|ref|YP_007020067.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Candidatus
Endolissoclinum patella L2]
gi|425857763|gb|AFX98799.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Candidatus
Endolissoclinum patella L2]
Length = 211
Score = 270 bits (690), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 126/200 (63%), Positives = 159/200 (79%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
L+PMV+E ++RGERAYDI+SRLLKERII + GP+ND A VV AQLLFLE+ENP+K I M
Sbjct: 12 LVPMVVERTNRGERAYDIYSRLLKERIIFVMGPVNDAVASVVCAQLLFLEAENPTKDISM 71
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VT+GLA+YDTM+YIR ++T+C+GQAASMGSLLL +GT G+R AL NS IMI
Sbjct: 72 YINSPGGIVTSGLAMYDTMEYIRPDVSTVCIGQAASMGSLLLTAGTAGKRYALKNSRIMI 131
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQPSGG+ GQA D+ IH ++I+ V LN +Y KHTGQ + I++ M+RD FMTPE AK
Sbjct: 132 HQPSGGFQGQATDIEIHAREILAVRSRLNQIYVKHTGQKLHKIEEAMERDNFMTPEIAKS 191
Query: 214 FGIIDEVIDQRPMALVTDAV 233
FG ID+VI++R + D V
Sbjct: 192 FGTIDKVINKRTDLIKDDMV 211
>gi|338974245|ref|ZP_08629607.1| ATP-dependent Clp protease proteolytic subunit [Bradyrhizobiaceae
bacterium SG-6C]
gi|338232972|gb|EGP08100.1| ATP-dependent Clp protease proteolytic subunit [Bradyrhizobiaceae
bacterium SG-6C]
Length = 202
Score = 270 bits (690), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 120/193 (62%), Positives = 157/193 (81%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E ++RGERAYDIFSRLLKERII + GP+ D + ++VAQLLFLE+ENP K I
Sbjct: 2 NLVPMVVEQTNRGERAYDIFSRLLKERIIFVTGPVEDGMSVLIVAQLLFLEAENPKKEIS 61
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
MY+NSPGG VT+GLAIYDTMQ+IR P++T+C GQAASMGSLLLA+G K R +LPNS IM
Sbjct: 62 MYINSPGGVVTSGLAIYDTMQFIRPPVSTLCTGQAASMGSLLLAAGEKDMRFSLPNSRIM 121
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
+HQPSGG+ GQA D+ +H ++I+ + LN +Y KHTGQ + I+ ++RD F+T E AK
Sbjct: 122 VHQPSGGFQGQATDIMLHAQEILNLKKRLNEIYVKHTGQPYKAIEDALERDKFLTAEMAK 181
Query: 213 EFGIIDEVIDQRP 225
EFG++D+VID+RP
Sbjct: 182 EFGLVDKVIDKRP 194
>gi|407775744|ref|ZP_11123036.1| Protease subunit of ATP-dependent Clp proteases [Thalassospira
profundimaris WP0211]
gi|407281105|gb|EKF06669.1| Protease subunit of ATP-dependent Clp proteases [Thalassospira
profundimaris WP0211]
Length = 209
Score = 270 bits (689), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 121/199 (60%), Positives = 159/199 (79%)
Query: 27 ISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESEN 86
I R SL+PMV+E +SRGERAYDIFSRLLKERI+ ING ++D + ++ AQLL LESEN
Sbjct: 2 IEERMNSLVPMVVEQTSRGERAYDIFSRLLKERIVFINGQVHDGMSSLICAQLLHLESEN 61
Query: 87 PSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRAL 146
P K I +Y+NSPGG VT+GLAIYDTMQYIR ++T+C+GQAASMGSLLL +G KG+R L
Sbjct: 62 PDKDISLYINSPGGVVTSGLAIYDTMQYIRCDVSTVCMGQAASMGSLLLMAGAKGKRYCL 121
Query: 147 PNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFM 206
PN+ +MIHQPSGG+ GQA D+ IH ++I+ + LN +Y +HTG+ ++ I+ M+RD F+
Sbjct: 122 PNARVMIHQPSGGFQGQASDIEIHAREILALRQRLNEIYVEHTGRDLKTIEDAMERDNFL 181
Query: 207 TPEEAKEFGIIDEVIDQRP 225
TP++AKEFG+IDEV+ RP
Sbjct: 182 TPDQAKEFGLIDEVVTSRP 200
>gi|73666834|ref|YP_302850.1| ATP-dependent Clp protease proteolytic subunit [Ehrlichia canis
str. Jake]
gi|108935919|sp|Q3YSQ3.1|CLPP_EHRCJ RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|72393975|gb|AAZ68252.1| ATP-dependent Clp protease proteolytic subunit ClpP [Ehrlichia
canis str. Jake]
Length = 200
Score = 270 bits (689), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 126/193 (65%), Positives = 156/193 (80%)
Query: 32 FSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPI 91
+L+PMV+E +SRGERAYDI+SRLLKERII I GPI D A +VVAQL+FLE+ENP K I
Sbjct: 1 MTLVPMVVEQTSRGERAYDIYSRLLKERIIFITGPIEDQMASLVVAQLVFLEAENPEKEI 60
Query: 92 HMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTI 151
MY+NSPGG VTAGL+IYDTMQYI+ ++T+CLGQAASMGSLLLA+G G R ALPNS I
Sbjct: 61 CMYINSPGGVVTAGLSIYDTMQYIKPKVSTLCLGQAASMGSLLLAAGEPGMRYALPNSRI 120
Query: 152 MIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEA 211
MIHQPSGG+ GQA D+ IH K+I+ + LN +Y KHTG+ + + NM+RD FM E+A
Sbjct: 121 MIHQPSGGFQGQATDIEIHAKEILDIKSRLNDIYVKHTGRDLPEVVANMERDNFMRAEKA 180
Query: 212 KEFGIIDEVIDQR 224
K+FGIID+VI++R
Sbjct: 181 KDFGIIDKVIEKR 193
>gi|312113123|ref|YP_004010719.1| endopeptidase Clp [Rhodomicrobium vannielii ATCC 17100]
gi|311218252|gb|ADP69620.1| Endopeptidase Clp [Rhodomicrobium vannielii ATCC 17100]
Length = 214
Score = 270 bits (689), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 122/202 (60%), Positives = 161/202 (79%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
L+PMV+E ++RGERA+DI+SRLLKERII + G + D+ A +V+AQLLFLESENP K I++
Sbjct: 12 LVPMVVEQTNRGERAFDIYSRLLKERIIFLTGVVEDNMASLVIAQLLFLESENPKKEINI 71
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VT+GLA+YDTMQ+IR P++T+C+GQAASMGSLLLA+G G R ALPN+ +M+
Sbjct: 72 YINSPGGHVTSGLAMYDTMQFIRPPVSTLCVGQAASMGSLLLAAGEPGMRWALPNARVMV 131
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQPS G+ GQA D+ H + I++ LN +Y KHTGQ EVI++ +DRD+FM+PE+AK
Sbjct: 132 HQPSAGFQGQASDIERHAEDILKTKRRLNEIYVKHTGQPYEVIERTLDRDHFMSPEQAKA 191
Query: 214 FGIIDEVIDQRPMALVTDAVGR 235
FGIIDEV+ +R A T GR
Sbjct: 192 FGIIDEVLTKRAAAEETGNPGR 213
>gi|301091655|ref|XP_002896007.1| ATP-dependent Clp protease proteolytic subunit, putative
[Phytophthora infestans T30-4]
gi|262095668|gb|EEY53720.1| ATP-dependent Clp protease proteolytic subunit, putative
[Phytophthora infestans T30-4]
Length = 221
Score = 270 bits (689), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 121/192 (63%), Positives = 153/192 (79%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
SL+PMV+E S RGER +DI+SRLLKERI+ ++GP+NDD A +V AQLLFLESENP K +H
Sbjct: 21 SLVPMVLEQSPRGERVFDIYSRLLKERIVFVHGPVNDDMASLVTAQLLFLESENPEKDVH 80
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
MY+NSPGG V++GLAIYDTMQYI+ +NT+C+GQAASMGSLLLA G G R ALPN+ IM
Sbjct: 81 MYINSPGGIVSSGLAIYDTMQYIQPKVNTLCMGQAASMGSLLLAGGASGCRSALPNARIM 140
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQPSGG G A D+ I ++I+++ LN LY HTG+ ++VI++ MDRD FM P EA+
Sbjct: 141 IHQPSGGAQGMASDIAIQAEEIIKLRTRLNGLYASHTGKPLKVIEQAMDRDLFMDPREAQ 200
Query: 213 EFGIIDEVIDQR 224
EFGI+D +I R
Sbjct: 201 EFGIVDSIIANR 212
>gi|296134054|ref|YP_003641301.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermincola
potens JR]
gi|296032632|gb|ADG83400.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermincola
potens JR]
Length = 194
Score = 270 bits (689), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 121/193 (62%), Positives = 160/193 (82%)
Query: 32 FSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPI 91
+L+P+V+E ++RGERAYDI+SRLLK+RII I GPI+D A++V+AQ+LFLE+E+P K I
Sbjct: 1 MNLVPIVVEQTNRGERAYDIYSRLLKDRIIFIGGPIDDMVANLVIAQMLFLEAEDPDKDI 60
Query: 92 HMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTI 151
H+Y+NSPGG VTAG+AIYDTMQYI+ ++TIC+GQAASMGS LLA+GTKG+R ALP + I
Sbjct: 61 HIYINSPGGVVTAGMAIYDTMQYIKPDVSTICMGQAASMGSFLLAAGTKGKRYALPYTRI 120
Query: 152 MIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEA 211
MIHQP GG GQA D+ IH K+I+R+ LN L KHTGQ +EVI ++ +RD+FM+ EEA
Sbjct: 121 MIHQPLGGVQGQATDIDIHAKEILRMKSVLNELLAKHTGQPVEVIARDTERDFFMSAEEA 180
Query: 212 KEFGIIDEVIDQR 224
+++GI+DEVI R
Sbjct: 181 RKYGIVDEVISVR 193
>gi|299135043|ref|ZP_07028234.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Afipia sp.
1NLS2]
gi|298590020|gb|EFI50224.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Afipia sp.
1NLS2]
Length = 210
Score = 269 bits (688), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 120/193 (62%), Positives = 158/193 (81%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E ++RGERAYDIFSRLLKERII + GP+ D + +VVAQLLFLE+ENP K I
Sbjct: 10 NLVPMVVEQTNRGERAYDIFSRLLKERIIFLTGPVEDGMSTLVVAQLLFLEAENPKKEIS 69
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
MY+NSPGG VT+GLAIYDTMQ+IR P++T+C GQAASMGSLLLA+G K R +LPNS IM
Sbjct: 70 MYINSPGGVVTSGLAIYDTMQFIRPPVSTLCTGQAASMGSLLLAAGEKDMRFSLPNSRIM 129
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
+HQPSGG+ GQA D+ +H ++I+ + LN +Y KHTGQ + I+ ++RD F+T ++AK
Sbjct: 130 VHQPSGGFQGQATDIMLHAQEILNLKKRLNEIYVKHTGQDYKTIEDALERDNFLTADKAK 189
Query: 213 EFGIIDEVIDQRP 225
+FGI+D+VID+RP
Sbjct: 190 DFGIVDKVIDKRP 202
>gi|320164411|gb|EFW41310.1| ATP-dependent Clp protease proteolytic subunit [Capsaspora
owczarzaki ATCC 30864]
Length = 257
Score = 269 bits (688), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 123/223 (55%), Positives = 172/223 (77%), Gaps = 6/223 (2%)
Query: 3 SMRNLLSRTSMA-TKFLQLSKPSAQISARSFSLIPMVIEHSSRGERAYDIFSRLLKERII 61
S+ +++++S A + F + P+ +IP V+E++ + ER +D+FSRLL+ERII
Sbjct: 34 SLSPMVAKSSSAGSPFYSYASPTV-----GAGVIPTVVENTGKSERWFDLFSRLLRERII 88
Query: 62 CINGPINDDTAHVVVAQLLFLESENPSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINT 121
C+ GPI+D TA V+V QLLFLE +NP KPIHMY+NSPGG VTAG+AIYDTMQY++SP++T
Sbjct: 89 CLMGPIDDSTASVIVGQLLFLEGDNPLKPIHMYINSPGGVVTAGMAIYDTMQYVQSPVST 148
Query: 122 ICLGQAASMGSLLLASGTKGERRALPNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDAL 181
IC+GQAASMGSL+LA+G KG+R LP++ +MIHQP GG GQA D+ I ++I+++ + L
Sbjct: 149 ICMGQAASMGSLILAAGAKGQRFILPHARVMIHQPLGGAQGQASDIAIQAREILKMREML 208
Query: 182 NALYCKHTGQSIEVIQKNMDRDYFMTPEEAKEFGIIDEVIDQR 224
N +Y +HTGQ ++ I+ +RDYFM PEEAKEFGIID+VI +R
Sbjct: 209 NRIYVEHTGQPLKRIEDATERDYFMNPEEAKEFGIIDQVIQKR 251
>gi|414162390|ref|ZP_11418637.1| ATP-dependent Clp protease proteolytic subunit [Afipia felis ATCC
53690]
gi|410880170|gb|EKS28010.1| ATP-dependent Clp protease proteolytic subunit [Afipia felis ATCC
53690]
Length = 210
Score = 269 bits (688), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 120/193 (62%), Positives = 158/193 (81%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E ++RGERAYDIFSRLLKERII + GP+ D A +VVAQLLFLE+ENP K I
Sbjct: 10 NLVPMVVEQTNRGERAYDIFSRLLKERIIFLTGPVEDGMATLVVAQLLFLEAENPKKEIS 69
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
MY+NSPGG VT+GLAIYDTMQ+IR P++T+C GQAASMGSLLLA+G K R +LPNS IM
Sbjct: 70 MYINSPGGVVTSGLAIYDTMQFIRPPVSTLCTGQAASMGSLLLAAGEKDMRFSLPNSRIM 129
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
+HQPSGG+ GQA D+ +H ++I+ + LN +Y KHTGQ + I+ ++RD F+T ++A+
Sbjct: 130 VHQPSGGFQGQATDIMLHAQEILNLKKRLNEIYVKHTGQDYKTIEDALERDNFLTADKAR 189
Query: 213 EFGIIDEVIDQRP 225
+FGI+D+VID+RP
Sbjct: 190 DFGIVDKVIDRRP 202
>gi|335042770|ref|ZP_08535797.1| protease subunit of ATP-dependent Clp protease [Methylophaga
aminisulfidivorans MP]
gi|333789384|gb|EGL55266.1| protease subunit of ATP-dependent Clp protease [Methylophaga
aminisulfidivorans MP]
Length = 210
Score = 269 bits (688), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 120/193 (62%), Positives = 155/193 (80%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+P+V+E +SRGER+YDIFSRLLKER+I + GP+ D A++VVAQLLFLESENP K IH
Sbjct: 16 ALVPIVVEQTSRGERSYDIFSRLLKERVIFLVGPVEDQMANLVVAQLLFLESENPDKDIH 75
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
+Y+NSPGG VTAGLAIYDTMQ+I+ ++T+C+GQAASMG++LLA G +G+R LPNS IM
Sbjct: 76 LYINSPGGAVTAGLAIYDTMQFIKPNVSTLCIGQAASMGAVLLAGGAEGKRYCLPNSRIM 135
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
+HQP GG+ GQA D IH K+I+ + D LN + KHTGQ IE I+K+ DRD FM E+A
Sbjct: 136 VHQPLGGFQGQASDFDIHAKEILSIRDRLNGILAKHTGQDIEAIRKDTDRDNFMNGEQAV 195
Query: 213 EFGIIDEVIDQRP 225
E+G+ID V+ RP
Sbjct: 196 EYGLIDSVLTSRP 208
>gi|20129427|ref|NP_609388.1| CG5045, isoform A [Drosophila melanogaster]
gi|442627236|ref|NP_001260332.1| CG5045, isoform B [Drosophila melanogaster]
gi|7297671|gb|AAF52923.1| CG5045, isoform A [Drosophila melanogaster]
gi|21428864|gb|AAM50151.1| GH10833p [Drosophila melanogaster]
gi|220944040|gb|ACL84563.1| CG5045-PA [synthetic construct]
gi|220954028|gb|ACL89557.1| CG5045-PA [synthetic construct]
gi|223966793|emb|CAR93133.1| CG5045-PA [Drosophila melanogaster]
gi|440213650|gb|AGB92867.1| CG5045, isoform B [Drosophila melanogaster]
Length = 253
Score = 269 bits (688), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 130/219 (59%), Positives = 163/219 (74%), Gaps = 7/219 (3%)
Query: 12 SMATKFLQLSKPSAQI-----SARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGP 66
+ ++FLQ+S S Q S R+ +LIPMV+E + RGERAYDIFSRLLKERIIC+ G
Sbjct: 4 TAVSRFLQIS--SVQCGGRANSVRNINLIPMVVEQTGRGERAYDIFSRLLKERIICLMGN 61
Query: 67 INDDTAHVVVAQLLFLESENPSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQ 126
I DD + VVAQLLFL+SEN +KPIH+Y+NSPGG VTAGLAIYDTMQY++ PI T C+GQ
Sbjct: 62 ITDDISSTVVAQLLFLQSENVNKPIHLYINSPGGVVTAGLAIYDTMQYVKPPIATWCVGQ 121
Query: 127 AASMGSLLLASGTKGERRALPNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYC 186
A SMGSLLLA+G G R +LPN+ IMIHQPSGG GQA D+ IH ++I+++ L +Y
Sbjct: 122 ACSMGSLLLAAGAPGMRYSLPNARIMIHQPSGGAQGQATDILIHAEEIIKIKRQLTNIYV 181
Query: 187 KHTGQSIEVIQKNMDRDYFMTPEEAKEFGIIDEVIDQRP 225
KH + E + M+RD+FMTPEEAK GIID V++ P
Sbjct: 182 KHAKNTYEEMSGRMERDHFMTPEEAKVLGIIDHVLEHPP 220
>gi|426229089|ref|XP_004008625.1| PREDICTED: putative ATP-dependent Clp protease proteolytic subunit,
mitochondrial [Ovis aries]
Length = 272
Score = 269 bits (688), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 123/198 (62%), Positives = 161/198 (81%)
Query: 28 SARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENP 87
+AR+ LIP+V+E + RGERAYDI+SRLL+ERI+C+ GPI+D A +V+AQLLFL+SE+
Sbjct: 48 AARALPLIPIVVEQTGRGERAYDIYSRLLRERIVCVMGPIDDSVASLVIAQLLFLQSESN 107
Query: 88 SKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALP 147
KPIHMY+NSPGG VT+GLAIYDTMQYI +PI T C+GQAASMGSLLLA+GT G R +LP
Sbjct: 108 KKPIHMYINSPGGVVTSGLAIYDTMQYILNPICTWCVGQAASMGSLLLAAGTPGMRHSLP 167
Query: 148 NSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMT 207
NS IMIHQPSGG GQA D+ I ++I+++ L ++Y KHT QS++VI+ M+RD +M+
Sbjct: 168 NSRIMIHQPSGGARGQATDIAIQAEEIMKLKKQLYSIYAKHTKQSLQVIESAMERDRYMS 227
Query: 208 PEEAKEFGIIDEVIDQRP 225
P EA+EFGI+D+V+ P
Sbjct: 228 PMEAQEFGILDKVLVHPP 245
>gi|195434156|ref|XP_002065069.1| GK15263 [Drosophila willistoni]
gi|194161154|gb|EDW76055.1| GK15263 [Drosophila willistoni]
Length = 255
Score = 269 bits (688), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 130/222 (58%), Positives = 163/222 (73%), Gaps = 3/222 (1%)
Query: 4 MRNLLSRTSMATKFLQLSKPSAQISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICI 63
+RN L+ T S+ + S R +LIPMV+E + RGERAYDIFSRLLKERIIC+
Sbjct: 2 LRNTLTSLFHKTSVQCASRAN---SVRGINLIPMVVEQTGRGERAYDIFSRLLKERIICL 58
Query: 64 NGPINDDTAHVVVAQLLFLESENPSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTIC 123
G I DD + VVAQLLFL+SEN +KPIH+Y+NSPGG VTAGLAIYDTMQY++ PI T C
Sbjct: 59 MGNITDDISSTVVAQLLFLQSENVNKPIHLYINSPGGVVTAGLAIYDTMQYVKPPIATWC 118
Query: 124 LGQAASMGSLLLASGTKGERRALPNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNA 183
+GQA SMGSLLLA+G G R +LPN+ IMIHQPSGG GQA D+ IH ++I+++ L A
Sbjct: 119 VGQACSMGSLLLAAGAPGMRYSLPNARIMIHQPSGGAQGQATDILIHAEEIIKIKRQLTA 178
Query: 184 LYCKHTGQSIEVIQKNMDRDYFMTPEEAKEFGIIDEVIDQRP 225
+Y KH S + + + M+RD+FMTPEEAK GIID V++ P
Sbjct: 179 IYVKHAKNSYDEMCQRMERDHFMTPEEAKTLGIIDHVLEHPP 220
>gi|83949690|ref|ZP_00958423.1| Protease subunit of ATP-dependent Clp protease [Roseovarius
nubinhibens ISM]
gi|83837589|gb|EAP76885.1| Protease subunit of ATP-dependent Clp protease [Roseovarius
nubinhibens ISM]
Length = 203
Score = 269 bits (688), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 119/192 (61%), Positives = 160/192 (83%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E +SRGERAYDIFSRLLKERII +NGP++D + +VVAQLL LE+ENPSK I
Sbjct: 3 TLVPMVVEQTSRGERAYDIFSRLLKERIIFLNGPVHDGMSSLVVAQLLHLEAENPSKEIS 62
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
MY+NSPGG VT+GL+IYDTMQYIR ++T+ +GQAASMGSLLL +G KG R +LPNS IM
Sbjct: 63 MYINSPGGVVTSGLSIYDTMQYIRPAVSTLVIGQAASMGSLLLTAGAKGMRYSLPNSRIM 122
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
+HQPSGGY GQA D+ IH ++ +++ LN +Y KHTGQ+++ +++ ++RD FM+PEEAK
Sbjct: 123 VHQPSGGYQGQATDIMIHAEETLKLKRRLNEIYVKHTGQTLKKVEEALERDNFMSPEEAK 182
Query: 213 EFGIIDEVIDQR 224
+G+IDE+++ R
Sbjct: 183 SWGLIDEIVESR 194
>gi|414166615|ref|ZP_11422847.1| ATP-dependent Clp protease proteolytic subunit [Afipia
clevelandensis ATCC 49720]
gi|410892459|gb|EKS40251.1| ATP-dependent Clp protease proteolytic subunit [Afipia
clevelandensis ATCC 49720]
Length = 210
Score = 269 bits (688), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 120/193 (62%), Positives = 157/193 (81%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E ++RGERAYDIFSRLLKERII + GP+ D + ++VAQLLFLE+ENP K I
Sbjct: 10 NLVPMVVEQTNRGERAYDIFSRLLKERIIFVTGPVEDGMSVLIVAQLLFLEAENPKKEIS 69
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
MY+NSPGG VT+GLAIYDTMQ+IR P++T+C GQAASMGSLLLA+G K R +LPNS IM
Sbjct: 70 MYINSPGGVVTSGLAIYDTMQFIRPPVSTLCTGQAASMGSLLLAAGEKDMRFSLPNSRIM 129
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
+HQPSGG+ GQA D+ +H ++I+ + LN +Y KHTGQ + I+ ++RD F+T E AK
Sbjct: 130 VHQPSGGFQGQATDIMLHAQEILNLKKRLNEIYVKHTGQPYKAIEDALERDKFLTAEMAK 189
Query: 213 EFGIIDEVIDQRP 225
EFG++D+VID+RP
Sbjct: 190 EFGLVDKVIDKRP 202
>gi|296536161|ref|ZP_06898289.1| endopeptidase Clp [Roseomonas cervicalis ATCC 49957]
gi|296263532|gb|EFH10029.1| endopeptidase Clp [Roseomonas cervicalis ATCC 49957]
Length = 213
Score = 269 bits (688), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 121/193 (62%), Positives = 158/193 (81%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMVIE ++RGERA+DI+SRLLKERII + GP+ D + ++ AQLLFLESENP+K I
Sbjct: 12 NLVPMVIEQTARGERAFDIYSRLLKERIIFLTGPVYDQMSSLICAQLLFLESENPNKDIA 71
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
Y+NSPGG V+AGLA+YDTMQYIR+P++T+CLG AASMGSLLL +G KG+R ALPNS IM
Sbjct: 72 FYINSPGGVVSAGLAMYDTMQYIRAPVSTVCLGMAASMGSLLLTAGAKGKRFALPNSRIM 131
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
+HQPSGG GQA D+ I ++I+ + LN +Y KHTGQ IE I++ ++RD +M+ EEAK
Sbjct: 132 VHQPSGGAQGQATDIEIQAREILALRKRLNQIYVKHTGQPIEEIERKLERDSYMSAEEAK 191
Query: 213 EFGIIDEVIDQRP 225
EFG+IDEV+ +RP
Sbjct: 192 EFGLIDEVVLERP 204
>gi|255002920|ref|ZP_05277884.1| ATP-dependent Clp protease proteolytic subunit [Anaplasma marginale
str. Puerto Rico]
gi|255004048|ref|ZP_05278849.1| ATP-dependent Clp protease proteolytic subunit [Anaplasma marginale
str. Virginia]
Length = 198
Score = 269 bits (688), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 121/193 (62%), Positives = 158/193 (81%)
Query: 32 FSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPI 91
+L+PMV+E +SRGERAYDI+SRLLKERII I G + D+ A ++VAQL+FLE+ENP K I
Sbjct: 1 MNLVPMVVEQTSRGERAYDIYSRLLKERIIFITGTVEDNMASLIVAQLVFLEAENPEKDI 60
Query: 92 HMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTI 151
+Y+NSPGG VTAGL+IYDTMQYI+ ++T+CLGQAASMG+LLLA G G R ALPNS I
Sbjct: 61 SLYINSPGGVVTAGLSIYDTMQYIKPKVSTLCLGQAASMGALLLAGGEPGMRYALPNSRI 120
Query: 152 MIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEA 211
M+HQPSGG+ GQA D+ IH ++I+ + LN +Y KHTG+S+E I+ +M+RD FM E+A
Sbjct: 121 MVHQPSGGFRGQATDIEIHAREILEIKRRLNEIYVKHTGKSLEEIESSMERDNFMVAEKA 180
Query: 212 KEFGIIDEVIDQR 224
K+FGI+D+VID+R
Sbjct: 181 KDFGIVDKVIDKR 193
>gi|410950139|ref|XP_003981769.1| PREDICTED: putative ATP-dependent Clp protease proteolytic subunit,
mitochondrial [Felis catus]
Length = 273
Score = 269 bits (688), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 125/208 (60%), Positives = 164/208 (78%)
Query: 18 LQLSKPSAQISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVA 77
L L + +AR+ LIP+V+E + RGERAYDI+SRLL+ERI+C+ GPI+D A +V+A
Sbjct: 38 LALQRSLHATAARALPLIPIVVEQTGRGERAYDIYSRLLRERIVCVMGPIDDSVASLVIA 97
Query: 78 QLLFLESENPSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLAS 137
QLLFL+SE+ KPIHMY+NSPGG VT+GLAIYDTMQYI +PI T C+GQAASMGSLLLA+
Sbjct: 98 QLLFLQSESNKKPIHMYINSPGGMVTSGLAIYDTMQYILNPICTWCVGQAASMGSLLLAA 157
Query: 138 GTKGERRALPNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQ 197
GT G R +LPNS IMIHQPSGG GQA D+ I ++I+++ L ++Y KHT QS++VI+
Sbjct: 158 GTPGMRHSLPNSRIMIHQPSGGARGQATDIAIQAEEIMKLKKQLYSIYAKHTKQSLQVIE 217
Query: 198 KNMDRDYFMTPEEAKEFGIIDEVIDQRP 225
M+RD +M+P EA+EFGI+D+V+ P
Sbjct: 218 SAMERDRYMSPMEAQEFGILDKVLVHPP 245
>gi|332372582|gb|AEE61433.1| unknown [Dendroctonus ponderosae]
Length = 244
Score = 269 bits (687), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 121/197 (61%), Positives = 157/197 (79%)
Query: 29 ARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPS 88
AR+ L+P+V+E + RGER+YDI+SRLLKERIIC+ GPI+D + ++VAQLLFL++EN +
Sbjct: 24 ARNIGLVPIVVEQTGRGERSYDIYSRLLKERIICLMGPIHDTMSSLIVAQLLFLQAENTN 83
Query: 89 KPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPN 148
KPIHMY+NSPGG VTAGL IYDTMQY PI T C+GQA SM SLLLASG+ G R +LPN
Sbjct: 84 KPIHMYINSPGGSVTAGLGIYDTMQYCAPPIATWCVGQACSMASLLLASGSPGMRHSLPN 143
Query: 149 STIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTP 208
+ IMIHQPSGG GQA D+ I ++I+++ + +N LY +HTG +E I+KNM+RD FM+P
Sbjct: 144 ARIMIHQPSGGAQGQATDIQIQAEEIIKLKNQINQLYVRHTGLELETIEKNMERDKFMSP 203
Query: 209 EEAKEFGIIDEVIDQRP 225
EAKEFG+ID V+ + P
Sbjct: 204 VEAKEFGLIDTVLTRPP 220
>gi|321468091|gb|EFX79078.1| hypothetical protein DAPPUDRAFT_231060 [Daphnia pulex]
Length = 235
Score = 269 bits (687), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 126/207 (60%), Positives = 161/207 (77%), Gaps = 3/207 (1%)
Query: 19 QLSKPSAQISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQ 78
+L SAQ++ + L+P+VIE + RGERAYDI+SRLLKERIIC+ GPI DD + +VVAQ
Sbjct: 15 RLFHASAQLT---YPLVPIVIEQTGRGERAYDIYSRLLKERIICVMGPITDDLSSLVVAQ 71
Query: 79 LLFLESENPSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASG 138
LLFL+SE+ KP+HMY+NSPGG VTAGL IYDTMQY+ PI T C+GQA SM SLLLASG
Sbjct: 72 LLFLQSESNKKPVHMYINSPGGSVTAGLGIYDTMQYVLPPIATWCVGQACSMASLLLASG 131
Query: 139 TKGERRALPNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQK 198
+ G R +LPNS IMIHQPSGG GQA D+ I ++I+++ +N LY KHTG + VI+
Sbjct: 132 SPGMRYSLPNSRIMIHQPSGGVQGQATDIQIQAEEIMKLKKQINQLYGKHTGLQLSVIES 191
Query: 199 NMDRDYFMTPEEAKEFGIIDEVIDQRP 225
NM+RD FM+P EAKEFG+ID++++ P
Sbjct: 192 NMERDKFMSPVEAKEFGLIDKILEHPP 218
>gi|431922359|gb|ELK19450.1| Putative ATP-dependent Clp protease proteolytic subunit,
mitochondrial [Pteropus alecto]
Length = 274
Score = 269 bits (687), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 123/198 (62%), Positives = 161/198 (81%)
Query: 28 SARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENP 87
+AR+ LIP+V+E + RGERAYDI+SRLL+ERI+C+ GPI+D A +V+AQLLFL+SE+
Sbjct: 48 AARAIPLIPIVVEQTGRGERAYDIYSRLLRERIVCVMGPIDDGVASLVIAQLLFLQSESN 107
Query: 88 SKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALP 147
KPIHMY+NSPGG VT+GLAIYDTMQYI +PI T C+GQAASMGSLLLA+GT G R +LP
Sbjct: 108 KKPIHMYINSPGGMVTSGLAIYDTMQYILNPICTWCVGQAASMGSLLLAAGTPGMRHSLP 167
Query: 148 NSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMT 207
NS IMIHQPSGG GQA D+ I ++I+++ L ++Y KHT QS++VI+ M+RD +M+
Sbjct: 168 NSRIMIHQPSGGARGQATDIAIQAEEIMKLKKQLYSIYAKHTKQSLQVIESAMERDRYMS 227
Query: 208 PEEAKEFGIIDEVIDQRP 225
P EA+EFGI+D+V+ P
Sbjct: 228 PMEAQEFGILDKVLVHPP 245
>gi|114051824|ref|NP_001039879.1| putative ATP-dependent Clp protease proteolytic subunit,
mitochondrial [Bos taurus]
gi|118572228|sp|Q2KHU4.1|CLPP_BOVIN RecName: Full=Putative ATP-dependent Clp protease proteolytic
subunit, mitochondrial; AltName: Full=Endopeptidase Clp;
Flags: Precursor
gi|86826474|gb|AAI12881.1| ClpP caseinolytic peptidase, ATP-dependent, proteolytic subunit
homolog (E. coli) [Bos taurus]
gi|296485755|tpg|DAA27870.1| TPA: caseinolytic peptidase, ATP-dependent, proteolytic subunit
precursor [Bos taurus]
Length = 272
Score = 269 bits (687), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 123/198 (62%), Positives = 161/198 (81%)
Query: 28 SARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENP 87
+AR+ LIP+V+E + RGERAYDI+SRLL+ERI+C+ GPI+D A +V+AQLLFL+SE+
Sbjct: 48 AARALPLIPIVVEQTGRGERAYDIYSRLLRERIVCVMGPIDDSVASLVIAQLLFLQSESN 107
Query: 88 SKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALP 147
KPIHMY+NSPGG VT+GLAIYDTMQYI +PI T C+GQAASMGSLLLA+GT G R +LP
Sbjct: 108 KKPIHMYINSPGGVVTSGLAIYDTMQYILNPICTWCVGQAASMGSLLLAAGTPGMRHSLP 167
Query: 148 NSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMT 207
NS IMIHQPSGG GQA D+ I ++I+++ L ++Y KHT QS++VI+ M+RD +M+
Sbjct: 168 NSRIMIHQPSGGARGQATDIAIQAEEIMKLKKQLYSIYAKHTKQSLQVIESAMERDRYMS 227
Query: 208 PEEAKEFGIIDEVIDQRP 225
P EA+EFGI+D+V+ P
Sbjct: 228 PMEAQEFGILDKVLVHPP 245
>gi|392572059|gb|EIW65231.1| hypothetical protein TRAVEDRAFT_55853 [Trametes versicolor
FP-101664 SS1]
Length = 257
Score = 269 bits (687), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 125/200 (62%), Positives = 160/200 (80%), Gaps = 7/200 (3%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+P+VIE + RGER+YDIFSRLL+ER+I + GPI D + +VVAQLLFLE+E SKPIH
Sbjct: 53 NLVPIVIEQTGRGERSYDIFSRLLRERVIMLYGPIMDTDSALVVAQLLFLEAEETSKPIH 112
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
+Y+NSPGG VTAGLAIYDTMQY+ SPI+T C+GQA SMGSLLL +G KG+R ALPNS+IM
Sbjct: 113 VYVNSPGGSVTAGLAIYDTMQYVSSPIHTYCVGQACSMGSLLLVAGEKGKRHALPNSSIM 172
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALY---CKHTGQSIE----VIQKNMDRDYF 205
IHQPSGG SGQA D+ IH K+I+RV + L +Y C H G+S++ QK ++RDYF
Sbjct: 173 IHQPSGGASGQATDIAIHAKEILRVREVLTGIYQKHCAHEGESVQEGVDRFQKALERDYF 232
Query: 206 MTPEEAKEFGIIDEVIDQRP 225
MT +EA +FGI+D V+++RP
Sbjct: 233 MTAQEALQFGIVDRVLEKRP 252
>gi|254994793|ref|ZP_05276983.1| ATP-dependent Clp protease proteolytic subunit [Anaplasma marginale
str. Mississippi]
Length = 207
Score = 269 bits (687), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 121/193 (62%), Positives = 158/193 (81%)
Query: 32 FSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPI 91
+L+PMV+E +SRGERAYDI+SRLLKERII I G + D+ A ++VAQL+FLE+ENP K I
Sbjct: 10 MNLVPMVVEQTSRGERAYDIYSRLLKERIIFITGTVEDNMASLIVAQLVFLEAENPEKDI 69
Query: 92 HMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTI 151
+Y+NSPGG VTAGL+IYDTMQYI+ ++T+CLGQAASMG+LLLA G G R ALPNS I
Sbjct: 70 SLYINSPGGVVTAGLSIYDTMQYIKPKVSTLCLGQAASMGALLLAGGEPGMRYALPNSRI 129
Query: 152 MIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEA 211
M+HQPSGG+ GQA D+ IH ++I+ + LN +Y KHTG+S+E I+ +M+RD FM E+A
Sbjct: 130 MVHQPSGGFRGQATDIEIHAREILEIKRRLNEIYVKHTGKSLEEIESSMERDNFMVAEKA 189
Query: 212 KEFGIIDEVIDQR 224
K+FGI+D+VID+R
Sbjct: 190 KDFGIVDKVIDKR 202
>gi|288958758|ref|YP_003449099.1| ATP-dependent Clp protease, protease subunit [Azospirillum sp.
B510]
gi|288911066|dbj|BAI72555.1| ATP-dependent Clp protease, protease subunit [Azospirillum sp.
B510]
Length = 208
Score = 269 bits (687), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 123/195 (63%), Positives = 160/195 (82%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMVIE ++RGERAYDI+SRLLKERII + G +ND A ++ +QLLFLESENP+K I
Sbjct: 10 ALVPMVIEQTNRGERAYDIYSRLLKERIIFLIGGVNDAVASLICSQLLFLESENPNKDIA 69
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
+Y+NSPGG V+AGLAIYDTMQYIR ++T+C+GQAASMGSLLLA+G G+R +LPNS IM
Sbjct: 70 LYINSPGGYVSAGLAIYDTMQYIRPQVSTVCMGQAASMGSLLLAAGAPGKRFSLPNSRIM 129
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQPSGG GQA D+ I ++I+++ LN +Y KHTGQ ++ I+ M+RD FM+PEEAK
Sbjct: 130 IHQPSGGAQGQASDIEIQAQEILKLRSRLNDIYVKHTGQDLDTIETAMERDKFMSPEEAK 189
Query: 213 EFGIIDEVIDQRPMA 227
FG+IDEV+++RP A
Sbjct: 190 AFGLIDEVVEKRPGA 204
>gi|114800297|ref|YP_760784.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Hyphomonas
neptunium ATCC 15444]
gi|114740471|gb|ABI78596.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Hyphomonas
neptunium ATCC 15444]
Length = 207
Score = 269 bits (687), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 119/194 (61%), Positives = 158/194 (81%)
Query: 31 SFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKP 90
+ +L+PMV+E +SRGERA+DIFSRLLKERII + G I+D A ++ AQLLFLESENP +
Sbjct: 8 ALNLVPMVVEQTSRGERAFDIFSRLLKERIIFVTGGIDDGIASLITAQLLFLESENPKRE 67
Query: 91 IHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNST 150
I MY+NSPGG V++GLAIYDTMQY+R PI+T+C+GQAASMGSLLLA+G KG R ALPN+
Sbjct: 68 IAMYINSPGGYVSSGLAIYDTMQYVRCPISTVCIGQAASMGSLLLAAGEKGLRIALPNAR 127
Query: 151 IMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEE 210
+M+HQPSGGYSG A D+ H ++I+ + LN +Y +HTGQ +V+++ +DRD F+T EE
Sbjct: 128 VMLHQPSGGYSGVATDIERHAEEIIELKRRLNDIYVRHTGQEYDVVERKLDRDTFLTAEE 187
Query: 211 AKEFGIIDEVIDQR 224
A EFGI+D+V ++R
Sbjct: 188 AMEFGIVDKVYERR 201
>gi|403295988|ref|XP_003938903.1| PREDICTED: putative ATP-dependent Clp protease proteolytic subunit,
mitochondrial [Saimiri boliviensis boliviensis]
Length = 273
Score = 269 bits (687), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 123/198 (62%), Positives = 160/198 (80%)
Query: 28 SARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENP 87
+AR+ LIP+V+E + RGERAYDI+SRLL+ERI+C+ GPI+D A +V+AQLLFL+SE+
Sbjct: 48 AARALPLIPIVVEQTGRGERAYDIYSRLLRERIVCVMGPIDDSVASLVIAQLLFLQSESN 107
Query: 88 SKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALP 147
KPIHMY+NSPGG VTAGLAIYDTMQYI +PI T C+GQAASMGSLLLA+G+ G R +LP
Sbjct: 108 KKPIHMYINSPGGVVTAGLAIYDTMQYILNPICTWCVGQAASMGSLLLAAGSPGMRHSLP 167
Query: 148 NSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMT 207
NS IMIHQPSGG GQA D+ I ++I+++ L +Y KHT QS++VI+ M+RD +M+
Sbjct: 168 NSRIMIHQPSGGARGQATDIAIQAEEIMKLKKQLYNIYAKHTKQSLQVIESAMERDRYMS 227
Query: 208 PEEAKEFGIIDEVIDQRP 225
P EA+EFGI+D+V+ P
Sbjct: 228 PMEAQEFGILDKVLVHPP 245
>gi|440901057|gb|ELR52057.1| Putative ATP-dependent Clp protease proteolytic subunit,
mitochondrial [Bos grunniens mutus]
Length = 280
Score = 269 bits (687), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 123/198 (62%), Positives = 161/198 (81%)
Query: 28 SARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENP 87
+AR+ LIP+V+E + RGERAYDI+SRLL+ERI+C+ GPI+D A +V+AQLLFL+SE+
Sbjct: 56 AARALPLIPIVVEQTGRGERAYDIYSRLLRERIVCVMGPIDDSVASLVIAQLLFLQSESN 115
Query: 88 SKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALP 147
KPIHMY+NSPGG VT+GLAIYDTMQYI +PI T C+GQAASMGSLLLA+GT G R +LP
Sbjct: 116 KKPIHMYINSPGGVVTSGLAIYDTMQYILNPICTWCVGQAASMGSLLLAAGTPGMRHSLP 175
Query: 148 NSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMT 207
NS IMIHQPSGG GQA D+ I ++I+++ L ++Y KHT QS++VI+ M+RD +M+
Sbjct: 176 NSRIMIHQPSGGARGQATDIAIQAEEIMKLKKQLYSIYAKHTKQSLQVIESAMERDRYMS 235
Query: 208 PEEAKEFGIIDEVIDQRP 225
P EA+EFGI+D+V+ P
Sbjct: 236 PMEAQEFGILDKVLVHPP 253
>gi|116811645|emb|CAL25989.1| CG5045 [Drosophila melanogaster]
gi|116811649|emb|CAL25991.1| CG5045 [Drosophila melanogaster]
gi|116811651|emb|CAL25992.1| CG5045 [Drosophila melanogaster]
gi|116811653|emb|CAL25993.1| CG5045 [Drosophila melanogaster]
gi|116811655|emb|CAL25994.1| CG5045 [Drosophila melanogaster]
gi|116811657|emb|CAL25995.1| CG5045 [Drosophila melanogaster]
gi|116811659|emb|CAL25996.1| CG5045 [Drosophila melanogaster]
gi|116811661|emb|CAL25997.1| CG5045 [Drosophila melanogaster]
gi|116811663|emb|CAL25998.1| CG5045 [Drosophila melanogaster]
gi|116811665|emb|CAL25999.1| CG5045 [Drosophila melanogaster]
gi|223966785|emb|CAR93129.1| CG5045-PA [Drosophila melanogaster]
gi|223966787|emb|CAR93130.1| CG5045-PA [Drosophila melanogaster]
gi|223966789|emb|CAR93131.1| CG5045-PA [Drosophila melanogaster]
gi|223966791|emb|CAR93132.1| CG5045-PA [Drosophila melanogaster]
gi|223966795|emb|CAR93134.1| CG5045-PA [Drosophila melanogaster]
gi|223966797|emb|CAR93135.1| CG5045-PA [Drosophila melanogaster]
gi|223966799|emb|CAR93136.1| CG5045-PA [Drosophila melanogaster]
gi|223966801|emb|CAR93137.1| CG5045-PA [Drosophila melanogaster]
gi|223966803|emb|CAR93138.1| CG5045-PA [Drosophila melanogaster]
Length = 253
Score = 268 bits (686), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 130/219 (59%), Positives = 163/219 (74%), Gaps = 7/219 (3%)
Query: 12 SMATKFLQLSKPSAQI-----SARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGP 66
+ ++FLQ+S S Q S R+ +LIPMV+E + RGERAYDIFSRLLKERIIC+ G
Sbjct: 4 TAVSRFLQIS--SVQCGGRANSVRNINLIPMVVEQTGRGERAYDIFSRLLKERIICLMGN 61
Query: 67 INDDTAHVVVAQLLFLESENPSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQ 126
I DD + VVAQLLFL+SEN +KPIH+Y+NSPGG VTAGLAIYDTMQY++ PI T C+GQ
Sbjct: 62 ITDDISSTVVAQLLFLQSENVNKPIHLYINSPGGVVTAGLAIYDTMQYVKPPIATWCVGQ 121
Query: 127 AASMGSLLLASGTKGERRALPNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYC 186
A SMGSLLLA+G G R +LPN+ IMIHQPSGG GQA D+ IH ++I+++ L +Y
Sbjct: 122 ACSMGSLLLAAGAPGMRYSLPNARIMIHQPSGGAQGQATDILIHAEEIIKIKRQLTNIYV 181
Query: 187 KHTGQSIEVIQKNMDRDYFMTPEEAKEFGIIDEVIDQRP 225
KH + E + M+RD+FMTPEEAK GIID V++ P
Sbjct: 182 KHAKNTYEEMCGRMERDHFMTPEEAKVLGIIDHVLEHPP 220
>gi|116811647|emb|CAL25990.1| CG5045 [Drosophila melanogaster]
Length = 253
Score = 268 bits (686), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 130/216 (60%), Positives = 162/216 (75%), Gaps = 7/216 (3%)
Query: 15 TKFLQLSKPSAQI-----SARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPIND 69
++FLQ+S S Q S R+ +LIPMV+E + RGERAYDIFSRLLKERIIC+ G I D
Sbjct: 7 SRFLQIS--SVQCGGRANSVRNINLIPMVVEQTGRGERAYDIFSRLLKERIICLMGNITD 64
Query: 70 DTAHVVVAQLLFLESENPSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAAS 129
D + VVAQLLFL+SEN +KPIH+Y+NSPGG VTAGLAIYDTMQY++ PI T C+GQA S
Sbjct: 65 DISSTVVAQLLFLQSENVNKPIHLYINSPGGVVTAGLAIYDTMQYVKPPIATWCVGQACS 124
Query: 130 MGSLLLASGTKGERRALPNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHT 189
MGSLLLA+G G R +LPN+ IMIHQPSGG GQA D+ IH ++I+++ L +Y KH
Sbjct: 125 MGSLLLAAGAPGMRYSLPNARIMIHQPSGGAQGQATDILIHAEEIIKIKRQLTNIYVKHA 184
Query: 190 GQSIEVIQKNMDRDYFMTPEEAKEFGIIDEVIDQRP 225
+ E + M+RD+FMTPEEAK GIID V++ P
Sbjct: 185 KNTYEEMCGRMERDHFMTPEEAKVLGIIDHVLEHPP 220
>gi|114674891|ref|XP_512312.2| PREDICTED: putative ATP-dependent Clp protease proteolytic subunit,
mitochondrial [Pan troglodytes]
gi|410224542|gb|JAA09490.1| ClpP caseinolytic peptidase, ATP-dependent, proteolytic subunit
homolog [Pan troglodytes]
gi|410267064|gb|JAA21498.1| ClpP caseinolytic peptidase, ATP-dependent, proteolytic subunit
homolog [Pan troglodytes]
gi|410337167|gb|JAA37530.1| ClpP caseinolytic peptidase, ATP-dependent, proteolytic subunit
homolog [Pan troglodytes]
Length = 277
Score = 268 bits (686), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 124/198 (62%), Positives = 160/198 (80%)
Query: 28 SARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENP 87
+AR+ LIP+V+E + RGERAYDI+SRLL+ERI+C+ GPI+D A +V+AQLLFL+SE+
Sbjct: 52 AARALPLIPIVVEQTGRGERAYDIYSRLLRERIVCVMGPIDDSVASLVIAQLLFLQSESN 111
Query: 88 SKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALP 147
KPIHMY+NSPGG VTAGLAIYDTMQYI +PI T C+GQAASMGSLLLA+GT G R +LP
Sbjct: 112 KKPIHMYINSPGGVVTAGLAIYDTMQYILNPICTWCVGQAASMGSLLLAAGTPGMRHSLP 171
Query: 148 NSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMT 207
NS IMIHQPSGG GQA D+ I ++I+++ L +Y KHT QS++VI+ M+RD +M+
Sbjct: 172 NSRIMIHQPSGGARGQATDIAIQAEEIMKLKKQLYNIYAKHTKQSLQVIESAMERDRYMS 231
Query: 208 PEEAKEFGIIDEVIDQRP 225
P EA+EFGI+D+V+ P
Sbjct: 232 PMEAQEFGILDKVLVHPP 249
>gi|301784789|ref|XP_002927807.1| PREDICTED: putative ATP-dependent Clp protease proteolytic subunit,
mitochondrial-like [Ailuropoda melanoleuca]
Length = 273
Score = 268 bits (686), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 125/208 (60%), Positives = 162/208 (77%)
Query: 18 LQLSKPSAQISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVA 77
L L + +AR+ LIP+V+E + RGERAYDI+SRLL+ERI+C+ GPI+D A +V+A
Sbjct: 38 LALQRSLHATAARALPLIPIVVEQTGRGERAYDIYSRLLRERIVCVMGPIDDSVASLVIA 97
Query: 78 QLLFLESENPSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLAS 137
QLLFL+SE+ KPIHMY+NSPGG VT+GLAIYDTMQYI +PI T C+GQAASMGSLLLA+
Sbjct: 98 QLLFLQSESNKKPIHMYINSPGGMVTSGLAIYDTMQYILNPICTWCVGQAASMGSLLLAA 157
Query: 138 GTKGERRALPNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQ 197
GT G R +LPNS IMIHQPSGG GQA D+ I ++I+++ L +Y KHT QS+ VI+
Sbjct: 158 GTPGMRHSLPNSRIMIHQPSGGARGQATDIAIQAEEIMKLKKQLYGIYAKHTKQSLRVIE 217
Query: 198 KNMDRDYFMTPEEAKEFGIIDEVIDQRP 225
M+RD +M+P EA+EFGI+D+V+ P
Sbjct: 218 SAMERDRYMSPMEAQEFGILDKVLVHPP 245
>gi|116243166|sp|Q1GGF6.2|CLPP_SILST RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
Length = 210
Score = 268 bits (686), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 119/195 (61%), Positives = 159/195 (81%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E +SRGERAYDIFSRLLKERII +NGP++D + ++VAQLL LE+ENPSK I
Sbjct: 11 TLVPMVVEQTSRGERAYDIFSRLLKERIIFLNGPVHDGMSSLIVAQLLHLEAENPSKEIS 70
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
MY+NSPGG VT+GL+IYDTMQYI+ ++T+ +GQAASMGSLLL +G G R +LPNS +M
Sbjct: 71 MYINSPGGVVTSGLSIYDTMQYIKPKVSTLVIGQAASMGSLLLTAGEAGMRFSLPNSRVM 130
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
+HQPSGGY GQA D+ IH ++ +++ LN +Y KHTGQ + I+K ++RD FM+PE+AK
Sbjct: 131 VHQPSGGYQGQATDIMIHAEETLKLKRRLNEIYVKHTGQDYDTIEKALERDNFMSPEQAK 190
Query: 213 EFGIIDEVIDQRPMA 227
EFG+IDE+++ R A
Sbjct: 191 EFGLIDEIVENRSKA 205
>gi|374292313|ref|YP_005039348.1| ATP-dependent Clp protease proteolytic subunit [Azospirillum
lipoferum 4B]
gi|357424252|emb|CBS87119.1| ATP-dependent Clp protease proteolytic subunit [Azospirillum
lipoferum 4B]
Length = 207
Score = 268 bits (686), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 122/193 (63%), Positives = 159/193 (82%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMVIE ++RGERAYDI+SRLLKERII + G +ND A ++ +QLLFLESENP+K I
Sbjct: 10 ALVPMVIEQTNRGERAYDIYSRLLKERIIFLIGGVNDAVASLICSQLLFLESENPNKDIA 69
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
+Y+NSPGG V+AGLAIYDTMQYIR ++T+C+GQAASMGSLLLA+G G+R +LPNS IM
Sbjct: 70 LYINSPGGYVSAGLAIYDTMQYIRPQVSTVCMGQAASMGSLLLAAGAPGKRFSLPNSRIM 129
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQPSGG GQA D+ I ++I+++ LN +Y KHTGQ ++ I+ M+RD FM+PEEAK
Sbjct: 130 IHQPSGGAQGQASDIEIQAQEILKLRSRLNDIYVKHTGQDLDTIETAMERDKFMSPEEAK 189
Query: 213 EFGIIDEVIDQRP 225
FG+IDEV+++RP
Sbjct: 190 AFGLIDEVVEKRP 202
>gi|397497151|ref|XP_003819379.1| PREDICTED: putative ATP-dependent Clp protease proteolytic subunit,
mitochondrial [Pan paniscus]
Length = 277
Score = 268 bits (686), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 124/198 (62%), Positives = 160/198 (80%)
Query: 28 SARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENP 87
+AR+ LIP+V+E + RGERAYDI+SRLL+ERI+C+ GPI+D A +V+AQLLFL+SE+
Sbjct: 52 AARALPLIPIVVEQTGRGERAYDIYSRLLRERIVCVMGPIDDSVASLVIAQLLFLQSESN 111
Query: 88 SKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALP 147
KPIHMY+NSPGG VTAGLAIYDTMQYI +PI T C+GQAASMGSLLLA+GT G R +LP
Sbjct: 112 KKPIHMYINSPGGVVTAGLAIYDTMQYILNPICTWCVGQAASMGSLLLAAGTPGMRHSLP 171
Query: 148 NSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMT 207
NS IMIHQPSGG GQA D+ I ++I+++ L +Y KHT QS++VI+ M+RD +M+
Sbjct: 172 NSRIMIHQPSGGARGQATDIAIQAEEIMKLKKQLYNIYAKHTKQSLQVIESAMERDRYMS 231
Query: 208 PEEAKEFGIIDEVIDQRP 225
P EA+EFGI+D+V+ P
Sbjct: 232 PMEAQEFGILDKVLVHPP 249
>gi|281339765|gb|EFB15349.1| hypothetical protein PANDA_017639 [Ailuropoda melanoleuca]
Length = 272
Score = 268 bits (686), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 125/208 (60%), Positives = 162/208 (77%)
Query: 18 LQLSKPSAQISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVA 77
L L + +AR+ LIP+V+E + RGERAYDI+SRLL+ERI+C+ GPI+D A +V+A
Sbjct: 38 LALQRSLHATAARALPLIPIVVEQTGRGERAYDIYSRLLRERIVCVMGPIDDSVASLVIA 97
Query: 78 QLLFLESENPSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLAS 137
QLLFL+SE+ KPIHMY+NSPGG VT+GLAIYDTMQYI +PI T C+GQAASMGSLLLA+
Sbjct: 98 QLLFLQSESNKKPIHMYINSPGGMVTSGLAIYDTMQYILNPICTWCVGQAASMGSLLLAA 157
Query: 138 GTKGERRALPNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQ 197
GT G R +LPNS IMIHQPSGG GQA D+ I ++I+++ L +Y KHT QS+ VI+
Sbjct: 158 GTPGMRHSLPNSRIMIHQPSGGARGQATDIAIQAEEIMKLKKQLYGIYAKHTKQSLRVIE 217
Query: 198 KNMDRDYFMTPEEAKEFGIIDEVIDQRP 225
M+RD +M+P EA+EFGI+D+V+ P
Sbjct: 218 SAMERDRYMSPMEAQEFGILDKVLVHPP 245
>gi|74188717|dbj|BAE28093.1| unnamed protein product [Mus musculus]
Length = 269
Score = 268 bits (686), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 123/198 (62%), Positives = 160/198 (80%)
Query: 28 SARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENP 87
+ R+F LIP+V+E + RGERAYDI+SRLL+ERI+C+ GPI+D A +V+AQLLFL+SE+
Sbjct: 45 ATRAFPLIPIVVEQTGRGERAYDIYSRLLRERIVCVMGPIDDSVASLVIAQLLFLQSESN 104
Query: 88 SKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALP 147
KPIHMY+NSPGG VTAGLAIYDTMQYI +PI T C+GQAASMGSLLLA+G+ G R +LP
Sbjct: 105 KKPIHMYINSPGGVVTAGLAIYDTMQYILNPICTWCVGQAASMGSLLLAAGSPGMRHSLP 164
Query: 148 NSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMT 207
NS IMIHQPSGG GQA D+ I ++I+++ L +Y KHT QS++VI+ M+RD +M+
Sbjct: 165 NSRIMIHQPSGGARGQATDIAIQAEEIMKLKKQLYNIYAKHTKQSLQVIESAMERDRYMS 224
Query: 208 PEEAKEFGIIDEVIDQRP 225
P EA+EFGI+D+V+ P
Sbjct: 225 PMEAQEFGILDKVLVHPP 242
>gi|332016545|gb|EGI57426.1| Putative ATP-dependent Clp protease proteolytic subunit,
mitochondrial [Acromyrmex echinatior]
Length = 224
Score = 268 bits (686), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 121/196 (61%), Positives = 156/196 (79%)
Query: 26 QISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESE 85
++S+R + +P+V+E S RGERAYDI+SRLLKERIIC+ GP+ D A V+AQLLFL+SE
Sbjct: 6 KVSSRYLNFVPIVVEQSGRGERAYDIYSRLLKERIICLMGPVTDVVASAVIAQLLFLQSE 65
Query: 86 NPSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRA 145
+ PIH+Y+NSPGG VTAGL IYDTMQY+ PI+T C+GQA SM SLLLA+GTKG R +
Sbjct: 66 SSKNPIHLYINSPGGSVTAGLGIYDTMQYVLPPISTWCVGQACSMASLLLAAGTKGMRHS 125
Query: 146 LPNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYF 205
LPN+ IMIHQPSGG GQA D+ I +I+++ +N LY KHTGQ++E I K+M+RD F
Sbjct: 126 LPNARIMIHQPSGGVQGQATDIQIQATEILKLKQQINELYVKHTGQNLEEIAKSMERDNF 185
Query: 206 MTPEEAKEFGIIDEVI 221
M+P +AKEFGIID+V+
Sbjct: 186 MSPTQAKEFGIIDKVL 201
>gi|260432980|ref|ZP_05786951.1| Clp protease [Silicibacter lacuscaerulensis ITI-1157]
gi|260416808|gb|EEX10067.1| Clp protease [Silicibacter lacuscaerulensis ITI-1157]
Length = 210
Score = 268 bits (686), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 125/195 (64%), Positives = 157/195 (80%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E +SRGERAYDIFSRLLKERI+ INGPI+D +H++VAQLL LE+ENP K I
Sbjct: 11 TLVPMVVEQTSRGERAYDIFSRLLKERIVFINGPIHDGMSHLIVAQLLHLEAENPKKEIS 70
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
+Y+NSPGG VT+GLAIYDTMQYI+ +T+ +GQAASMGS+LLA G KG R ALPNS IM
Sbjct: 71 IYINSPGGVVTSGLAIYDTMQYIKPKCSTLVIGQAASMGSVLLAGGEKGMRFALPNSRIM 130
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
+HQPSGGY GQA D+ IH + ++ D L +Y KHTGQS + I+K +DRD FM+PEEAK
Sbjct: 131 VHQPSGGYQGQASDIMIHAAETQKLKDRLYDIYAKHTGQSKKTIEKALDRDNFMSPEEAK 190
Query: 213 EFGIIDEVIDQRPMA 227
E+G IDE+++ R A
Sbjct: 191 EWGHIDEIVESRTKA 205
>gi|269959005|ref|YP_003328794.1| ATP-dependent Clp protease proteolytic subunit [Anaplasma centrale
str. Israel]
gi|269848836|gb|ACZ49480.1| ATP-dependent Clp protease proteolytic subunit [Anaplasma centrale
str. Israel]
Length = 215
Score = 268 bits (686), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 121/193 (62%), Positives = 158/193 (81%)
Query: 32 FSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPI 91
+L+PMV+E +SRGERAYDI+SRLLKERII I G + D+ A ++VAQL+FLE+ENP K I
Sbjct: 18 MNLVPMVVEQTSRGERAYDIYSRLLKERIIFITGTVEDNMASLIVAQLVFLEAENPEKDI 77
Query: 92 HMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTI 151
+Y+NSPGG VTAGL+IYDTMQYI+ ++T+CLGQAASMG+LLLA G G R ALPNS I
Sbjct: 78 SLYINSPGGVVTAGLSIYDTMQYIKPKVSTLCLGQAASMGALLLAGGEPGMRYALPNSRI 137
Query: 152 MIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEA 211
M+HQPSGG+ GQA D+ IH ++I+ + LN +Y KHTG+S+E I+ +M+RD FM E+A
Sbjct: 138 MVHQPSGGFRGQATDIEIHAREILEIKRRLNEIYVKHTGKSLEEIESSMERDNFMVAEKA 197
Query: 212 KEFGIIDEVIDQR 224
K+FGI+D+VID+R
Sbjct: 198 KDFGIVDKVIDKR 210
>gi|56416580|ref|YP_153654.1| ATP-dependent Clp protease proteolytic subunit [Anaplasma marginale
str. St. Maries]
gi|222474947|ref|YP_002563362.1| ATP-dependent Clp protease proteolytic subunit [Anaplasma marginale
str. Florida]
gi|67460191|sp|Q5PBD0.1|CLPP_ANAMM RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|254763783|sp|B9KHZ4.1|CLPP_ANAMF RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|56387812|gb|AAV86399.1| ATP-dependent clp protease proteolytic subunit [Anaplasma marginale
str. St. Maries]
gi|222419083|gb|ACM49106.1| ATP-dependent clp protease proteolytic subunit (clpP) [Anaplasma
marginale str. Florida]
Length = 215
Score = 268 bits (685), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 121/193 (62%), Positives = 158/193 (81%)
Query: 32 FSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPI 91
+L+PMV+E +SRGERAYDI+SRLLKERII I G + D+ A ++VAQL+FLE+ENP K I
Sbjct: 18 MNLVPMVVEQTSRGERAYDIYSRLLKERIIFITGTVEDNMASLIVAQLVFLEAENPEKDI 77
Query: 92 HMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTI 151
+Y+NSPGG VTAGL+IYDTMQYI+ ++T+CLGQAASMG+LLLA G G R ALPNS I
Sbjct: 78 SLYINSPGGVVTAGLSIYDTMQYIKPKVSTLCLGQAASMGALLLAGGEPGMRYALPNSRI 137
Query: 152 MIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEA 211
M+HQPSGG+ GQA D+ IH ++I+ + LN +Y KHTG+S+E I+ +M+RD FM E+A
Sbjct: 138 MVHQPSGGFRGQATDIEIHAREILEIKRRLNEIYVKHTGKSLEEIESSMERDNFMVAEKA 197
Query: 212 KEFGIIDEVIDQR 224
K+FGI+D+VID+R
Sbjct: 198 KDFGIVDKVIDKR 210
>gi|8393156|ref|NP_059089.1| putative ATP-dependent Clp protease proteolytic subunit,
mitochondrial precursor [Mus musculus]
gi|5921799|sp|O88696.1|CLPP_MOUSE RecName: Full=Putative ATP-dependent Clp protease proteolytic
subunit, mitochondrial; AltName: Full=Endopeptidase Clp;
Flags: Precursor
gi|3559935|emb|CAA06443.1| ClpP protease [Mus musculus]
gi|4454289|emb|CAA09966.1| ClpP protease [Mus musculus]
gi|12805083|gb|AAH01998.1| Caseinolytic peptidase, ATP-dependent, proteolytic subunit homolog
(E. coli) [Mus musculus]
gi|12835038|dbj|BAB23132.1| unnamed protein product [Mus musculus]
gi|74207567|dbj|BAE40033.1| unnamed protein product [Mus musculus]
gi|74217075|dbj|BAE26636.1| unnamed protein product [Mus musculus]
gi|148706268|gb|EDL38215.1| caseinolytic peptidase, ATP-dependent, proteolytic subunit homolog
(E. coli) [Mus musculus]
Length = 272
Score = 268 bits (685), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 123/198 (62%), Positives = 160/198 (80%)
Query: 28 SARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENP 87
+ R+F LIP+V+E + RGERAYDI+SRLL+ERI+C+ GPI+D A +V+AQLLFL+SE+
Sbjct: 48 ATRAFPLIPIVVEQTGRGERAYDIYSRLLRERIVCVMGPIDDSVASLVIAQLLFLQSESN 107
Query: 88 SKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALP 147
KPIHMY+NSPGG VTAGLAIYDTMQYI +PI T C+GQAASMGSLLLA+G+ G R +LP
Sbjct: 108 KKPIHMYINSPGGVVTAGLAIYDTMQYILNPICTWCVGQAASMGSLLLAAGSPGMRHSLP 167
Query: 148 NSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMT 207
NS IMIHQPSGG GQA D+ I ++I+++ L +Y KHT QS++VI+ M+RD +M+
Sbjct: 168 NSRIMIHQPSGGARGQATDIAIQAEEIMKLKKQLYNIYAKHTKQSLQVIESAMERDRYMS 227
Query: 208 PEEAKEFGIIDEVIDQRP 225
P EA+EFGI+D+V+ P
Sbjct: 228 PMEAQEFGILDKVLVHPP 245
>gi|57238933|ref|YP_180069.1| ATP-dependent Clp protease proteolytic subunit [Ehrlichia
ruminantium str. Welgevonden]
gi|58578866|ref|YP_197078.1| ATP-dependent Clp protease proteolytic subunit [Ehrlichia
ruminantium str. Welgevonden]
gi|67460160|sp|Q5HBX5.1|CLPP_EHRRW RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|57161012|emb|CAH57918.1| ATP-dependent Clp protease proteolytic subunit [Ehrlichia
ruminantium str. Welgevonden]
gi|58417492|emb|CAI26696.1| ATP-dependent CLP protease proteolytic subunit [Ehrlichia
ruminantium str. Welgevonden]
Length = 198
Score = 268 bits (685), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 124/193 (64%), Positives = 156/193 (80%)
Query: 32 FSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPI 91
+L+PMV+E +SRGERAYDI+SRLLKERII I GPI D A +VVAQL+FLE+ENP K I
Sbjct: 1 MTLVPMVVEQTSRGERAYDIYSRLLKERIIFITGPIEDQMASLVVAQLIFLEAENPEKDI 60
Query: 92 HMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTI 151
MY+NSPGG VTAGL+IYDTMQY++ I T+CLGQAASMGSLLLA+G KG R ALPNS I
Sbjct: 61 SMYINSPGGVVTAGLSIYDTMQYVKPRIATLCLGQAASMGSLLLAAGEKGMRCALPNSRI 120
Query: 152 MIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEA 211
MIHQPSGG+ GQA D+ IH K+I+ + LN +Y KHTG+ + + +M+RD FM+ + A
Sbjct: 121 MIHQPSGGFQGQATDIEIHAKEILNIKSRLNYIYVKHTGRELSEVVASMERDNFMSADSA 180
Query: 212 KEFGIIDEVIDQR 224
++FGIID+VI++R
Sbjct: 181 QDFGIIDKVIEKR 193
>gi|432102000|gb|ELK29820.1| Putative ATP-dependent Clp protease proteolytic subunit,
mitochondrial [Myotis davidii]
Length = 273
Score = 268 bits (685), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 126/219 (57%), Positives = 165/219 (75%)
Query: 7 LLSRTSMATKFLQLSKPSAQISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGP 66
L M L L + +AR+ LIP+V+E + RGERAYDI+SRLL+ERI+C+ GP
Sbjct: 27 LFPTQRMPETGLALQRNLHTTAARAIPLIPIVVEQTGRGERAYDIYSRLLRERIVCVMGP 86
Query: 67 INDDTAHVVVAQLLFLESENPSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQ 126
I+D+ A +V+AQLLFL+SE+ KPIHMY+NSPGG VT+GLAIYDTMQYI +PI T C+GQ
Sbjct: 87 IDDNVASLVIAQLLFLQSESNKKPIHMYINSPGGLVTSGLAIYDTMQYILNPICTWCVGQ 146
Query: 127 AASMGSLLLASGTKGERRALPNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYC 186
AASMGSLLL +GT G R +LPNS IMIHQPSGG GQA D+ I ++I+++ L +Y
Sbjct: 147 AASMGSLLLTAGTPGMRHSLPNSRIMIHQPSGGARGQATDIAIQAEEIIKLKKQLYTIYA 206
Query: 187 KHTGQSIEVIQKNMDRDYFMTPEEAKEFGIIDEVIDQRP 225
KHT QS++VI+ M+RD +M+P EA+EFGI+D+V+ P
Sbjct: 207 KHTKQSLQVIESAMERDRYMSPMEAQEFGILDKVLVHPP 245
>gi|333977877|ref|YP_004515822.1| ATP-dependent Clp protease proteolytic subunit [Desulfotomaculum
kuznetsovii DSM 6115]
gi|333821358|gb|AEG14021.1| ATP-dependent Clp protease proteolytic subunit [Desulfotomaculum
kuznetsovii DSM 6115]
Length = 197
Score = 268 bits (685), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 122/192 (63%), Positives = 157/192 (81%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+P+V+E ++RGERAYDI+SRLLK+RII I GPI+D A++V+AQ+LFLE+E+P K IH
Sbjct: 3 TLVPIVVEQTNRGERAYDIYSRLLKDRIIFIGGPIDDHVANLVIAQMLFLEAEDPEKDIH 62
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
Y+NSPGG VTAGLAIYDTMQYI+ ++TICLGQAASMGS LLA+G KG+R ALP + IM
Sbjct: 63 FYINSPGGVVTAGLAIYDTMQYIKPDVSTICLGQAASMGSFLLAAGAKGKRYALPYARIM 122
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
+HQP GG GQA ++ IH ++I+R+ D LN L KHTGQ E I ++ DRD+FM+ EEAK
Sbjct: 123 LHQPLGGVQGQATEIEIHAREILRIKDILNELLAKHTGQPREKIARDTDRDFFMSAEEAK 182
Query: 213 EFGIIDEVIDQR 224
E+GIIDEV+ R
Sbjct: 183 EYGIIDEVLTYR 194
>gi|296232651|ref|XP_002761668.1| PREDICTED: putative ATP-dependent Clp protease proteolytic subunit,
mitochondrial [Callithrix jacchus]
Length = 273
Score = 268 bits (685), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 123/198 (62%), Positives = 160/198 (80%)
Query: 28 SARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENP 87
+AR+ LIP+V+E + RGERAYDI+SRLL+ERI+C+ GPI+D A +V+AQLLFL+SE+
Sbjct: 48 AARALPLIPIVVEQTGRGERAYDIYSRLLRERIVCVMGPIDDSVASLVIAQLLFLQSESN 107
Query: 88 SKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALP 147
KPIHMY+NSPGG VTAGLAIYDTMQYI +PI T C+GQAASMGSLLLA+G+ G R +LP
Sbjct: 108 KKPIHMYINSPGGVVTAGLAIYDTMQYILNPICTWCVGQAASMGSLLLAAGSPGMRHSLP 167
Query: 148 NSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMT 207
NS IMIHQPSGG GQA D+ I ++I+++ L +Y KHT QS++VI+ M+RD +M+
Sbjct: 168 NSRIMIHQPSGGARGQATDIAIQAEEIMKLKKQLYNIYAKHTKQSLQVIESAMERDRYMS 227
Query: 208 PEEAKEFGIIDEVIDQRP 225
P EA+EFGI+D+V+ P
Sbjct: 228 PMEAQEFGILDKVLVHPP 245
>gi|391342988|ref|XP_003745797.1| PREDICTED: putative ATP-dependent Clp protease proteolytic subunit,
mitochondrial-like [Metaseiulus occidentalis]
Length = 231
Score = 268 bits (685), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 124/201 (61%), Positives = 156/201 (77%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
++P+VIE + RGERAYDI+SRLLKERIIC+ GPINDD A +VVAQLLFL+SE+ KPIH+
Sbjct: 27 MVPIVIEQTGRGERAYDIYSRLLKERIICLMGPINDDIASLVVAQLLFLQSESSKKPIHL 86
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VTAGL IYDTMQY+ PI+T C+GQA S SLLLA+G +G R +LPNS IM+
Sbjct: 87 YINSPGGSVTAGLGIYDTMQYVLPPISTWCVGQACSAASLLLAAGEQGMRHSLPNSRIMV 146
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQPSGG SGQA D+ IH ++I+ + +N +Y KHT Q IE I M+RD FM+PE+AK+
Sbjct: 147 HQPSGGVSGQATDIQIHAEEILYLKKKVNRIYAKHTKQPIEAIDSIMERDRFMSPEQAKD 206
Query: 214 FGIIDEVIDQRPMALVTDAVG 234
FG+ID V++Q P T G
Sbjct: 207 FGLIDTVLEQPPAVKETRGFG 227
>gi|348550684|ref|XP_003461161.1| PREDICTED: putative ATP-dependent Clp protease proteolytic subunit,
mitochondrial-like [Cavia porcellus]
Length = 272
Score = 268 bits (685), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 123/198 (62%), Positives = 160/198 (80%)
Query: 28 SARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENP 87
+AR+ LIP+V+E + RGERAYDI+SRLL+ERI+C+ GPI+D A +V+AQLLFL+SE+
Sbjct: 48 AARTIPLIPIVVEQTGRGERAYDIYSRLLRERIVCVMGPIDDSVASLVIAQLLFLQSESN 107
Query: 88 SKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALP 147
KPIHMY+NSPGG VTAGLAIYDTMQYI +PI T C+GQAASMGSLLLA+G+ G R +LP
Sbjct: 108 KKPIHMYINSPGGVVTAGLAIYDTMQYILNPICTWCVGQAASMGSLLLAAGSPGMRHSLP 167
Query: 148 NSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMT 207
NS IMIHQPSGG GQA D+ I ++I+++ L +Y KHT QS++VI+ M+RD +M+
Sbjct: 168 NSRIMIHQPSGGARGQATDIAIQAEEIMKLKKQLYNIYAKHTKQSLQVIESAMERDRYMS 227
Query: 208 PEEAKEFGIIDEVIDQRP 225
P EA+EFGI+D+V+ P
Sbjct: 228 PMEAQEFGILDKVLVHPP 245
>gi|115311359|sp|Q2W3H9.2|CLPP_MAGMM RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
Length = 203
Score = 268 bits (685), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 120/193 (62%), Positives = 159/193 (82%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E ++RGER+YDI+SRLLKERII + G + D+ A ++ AQLLFLESENPSK I
Sbjct: 3 TLVPMVVEQTNRGERSYDIYSRLLKERIIFLTGQVYDEVASLICAQLLFLESENPSKDIA 62
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
Y+NSPGG VT+GLAIYDTMQYIR ++T+C+GQAASMGSLL+ +G KG+R +LPNS IM
Sbjct: 63 FYINSPGGVVTSGLAIYDTMQYIRPKVSTVCIGQAASMGSLLMTAGEKGKRFSLPNSRIM 122
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
+HQPSGG GQA D+ I ++I+ + LN +Y +HTGQ ++VI+K M+RD FMT +EAK
Sbjct: 123 VHQPSGGAQGQATDIEIQAREILALRARLNNIYVEHTGQPLDVIEKVMERDKFMTADEAK 182
Query: 213 EFGIIDEVIDQRP 225
EFG+IDEV+++RP
Sbjct: 183 EFGLIDEVVNKRP 195
>gi|380789473|gb|AFE66612.1| putative ATP-dependent Clp protease proteolytic subunit,
mitochondrial precursor [Macaca mulatta]
Length = 277
Score = 268 bits (684), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 123/198 (62%), Positives = 160/198 (80%)
Query: 28 SARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENP 87
+AR+ LIP+V+E + RGERAYDI+SRLL+ERI+C+ GPI+D A +V+AQLLFL+SE+
Sbjct: 52 AARALPLIPIVVEQTGRGERAYDIYSRLLRERIVCVMGPIDDSVASLVIAQLLFLQSESN 111
Query: 88 SKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALP 147
KPIHMY+NSPGG VTAGLAIYDTMQYI +PI T C+GQAASMGSLLLA+G+ G R +LP
Sbjct: 112 KKPIHMYINSPGGVVTAGLAIYDTMQYILNPICTWCVGQAASMGSLLLAAGSPGMRHSLP 171
Query: 148 NSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMT 207
NS IMIHQPSGG GQA D+ I ++I+++ L +Y KHT QS++VI+ M+RD +M+
Sbjct: 172 NSRIMIHQPSGGARGQATDIAIQAEEIMKLKKQLYNIYAKHTKQSLQVIESAMERDRYMS 231
Query: 208 PEEAKEFGIIDEVIDQRP 225
P EA+EFGI+D+V+ P
Sbjct: 232 PMEAQEFGILDKVLVHPP 249
>gi|62290024|ref|YP_221817.1| ATP-dependent Clp protease proteolytic subunit [Brucella abortus
bv. 1 str. 9-941]
gi|82699951|ref|YP_414525.1| ATP-dependent Clp protease proteolytic subunit [Brucella melitensis
biovar Abortus 2308]
gi|161619061|ref|YP_001592948.1| ATP-dependent Clp protease proteolytic subunit [Brucella canis ATCC
23365]
gi|163843378|ref|YP_001627782.1| ATP-dependent Clp protease proteolytic subunit [Brucella suis ATCC
23445]
gi|189024264|ref|YP_001935032.1| ATP-dependent Clp protease proteolytic subunit [Brucella abortus
S19]
gi|260546576|ref|ZP_05822315.1| clp protease [Brucella abortus NCTC 8038]
gi|260566355|ref|ZP_05836825.1| clp protease [Brucella suis bv. 4 str. 40]
gi|260754852|ref|ZP_05867200.1| endopeptidase Clp [Brucella abortus bv. 6 str. 870]
gi|260758069|ref|ZP_05870417.1| endopeptidase Clp [Brucella abortus bv. 4 str. 292]
gi|260761893|ref|ZP_05874236.1| endopeptidase Clp [Brucella abortus bv. 2 str. 86/8/59]
gi|260883864|ref|ZP_05895478.1| ClpP [Brucella abortus bv. 9 str. C68]
gi|261214103|ref|ZP_05928384.1| endopeptidase Clp [Brucella abortus bv. 3 str. Tulya]
gi|261219456|ref|ZP_05933737.1| ATP-dependent Clp protease [Brucella ceti M13/05/1]
gi|261222276|ref|ZP_05936557.1| ClpP [Brucella ceti B1/94]
gi|261314167|ref|ZP_05953364.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|261317744|ref|ZP_05956941.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261321952|ref|ZP_05961149.1| conserved hypothetical protein [Brucella ceti M644/93/1]
gi|261325200|ref|ZP_05964397.1| ClpP [Brucella neotomae 5K33]
gi|261752415|ref|ZP_05996124.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Brucella suis
bv. 5 str. 513]
gi|261758300|ref|ZP_06002009.1| clp protease [Brucella sp. F5/99]
gi|265984170|ref|ZP_06096905.1| conserved hypothetical protein [Brucella sp. 83/13]
gi|265988775|ref|ZP_06101332.1| ClpP [Brucella pinnipedialis M292/94/1]
gi|265998240|ref|ZP_06110797.1| ClpP [Brucella ceti M490/95/1]
gi|294852448|ref|ZP_06793121.1| Clp protease [Brucella sp. NVSL 07-0026]
gi|306838166|ref|ZP_07471022.1| ATP-dependent Clp protease proteolytic subunit [Brucella sp. NF
2653]
gi|306841836|ref|ZP_07474518.1| ATP-dependent Clp protease proteolytic subunit [Brucella sp. BO2]
gi|306843974|ref|ZP_07476569.1| ATP-dependent Clp protease proteolytic subunit [Brucella inopinata
BO1]
gi|340790728|ref|YP_004756193.1| ATP-dependent Clp protease, proteolytic subunit [Brucella
pinnipedialis B2/94]
gi|376273160|ref|YP_005151738.1| ATP-dependent Clp protease proteolytic subunit [Brucella abortus
A13334]
gi|376276279|ref|YP_005116718.1| ATP-dependent Clp protease proteolytic subunit [Brucella canis HSK
A52141]
gi|423166787|ref|ZP_17153490.1| ATP-dependent Clp protease proteolytic subunit [Brucella abortus
bv. 1 str. NI435a]
gi|423170839|ref|ZP_17157514.1| ATP-dependent Clp protease proteolytic subunit [Brucella abortus
bv. 1 str. NI474]
gi|423173079|ref|ZP_17159750.1| ATP-dependent Clp protease proteolytic subunit [Brucella abortus
bv. 1 str. NI486]
gi|423178228|ref|ZP_17164872.1| ATP-dependent Clp protease proteolytic subunit [Brucella abortus
bv. 1 str. NI488]
gi|423180269|ref|ZP_17166910.1| ATP-dependent Clp protease proteolytic subunit [Brucella abortus
bv. 1 str. NI010]
gi|423183401|ref|ZP_17170038.1| ATP-dependent Clp protease proteolytic subunit [Brucella abortus
bv. 1 str. NI016]
gi|423185659|ref|ZP_17172273.1| ATP-dependent Clp protease proteolytic subunit [Brucella abortus
bv. 1 str. NI021]
gi|423188795|ref|ZP_17175405.1| ATP-dependent Clp protease proteolytic subunit [Brucella abortus
bv. 1 str. NI259]
gi|18203228|sp|Q9L7X6.1|CLPP_BRUAB RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|90101403|sp|Q2YPX1.1|CLPP_BRUA2 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|189082449|sp|A9M5C2.1|CLPP_BRUC2 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|189082450|sp|B0CGR1.1|CLPP_BRUSI RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|226706442|sp|B2S5W1.1|CLPP_BRUA1 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|6942106|gb|AAF32318.1|AF218420_1 ClpP [Brucella abortus]
gi|62196156|gb|AAX74456.1| ClpP, ATP-dependent Clp protease, proteolytic subunit ClpP
[Brucella abortus bv. 1 str. 9-941]
gi|82616052|emb|CAJ11088.1| Clp protease [Brucella melitensis biovar Abortus 2308]
gi|161335872|gb|ABX62177.1| ATP-dependent Clp protease proteolytic subunit [Brucella canis ATCC
23365]
gi|163674101|gb|ABY38212.1| ATP-dependent Clp protease proteolytic subunit [Brucella suis ATCC
23445]
gi|189019836|gb|ACD72558.1| Clp protease [Brucella abortus S19]
gi|260095626|gb|EEW79503.1| clp protease [Brucella abortus NCTC 8038]
gi|260155873|gb|EEW90953.1| clp protease [Brucella suis bv. 4 str. 40]
gi|260668387|gb|EEX55327.1| endopeptidase Clp [Brucella abortus bv. 4 str. 292]
gi|260672325|gb|EEX59146.1| endopeptidase Clp [Brucella abortus bv. 2 str. 86/8/59]
gi|260674960|gb|EEX61781.1| endopeptidase Clp [Brucella abortus bv. 6 str. 870]
gi|260873392|gb|EEX80461.1| ClpP [Brucella abortus bv. 9 str. C68]
gi|260915710|gb|EEX82571.1| endopeptidase Clp [Brucella abortus bv. 3 str. Tulya]
gi|260920860|gb|EEX87513.1| ClpP [Brucella ceti B1/94]
gi|260924545|gb|EEX91113.1| ATP-dependent Clp protease [Brucella ceti M13/05/1]
gi|261294642|gb|EEX98138.1| conserved hypothetical protein [Brucella ceti M644/93/1]
gi|261296967|gb|EEY00464.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261301180|gb|EEY04677.1| ClpP [Brucella neotomae 5K33]
gi|261303193|gb|EEY06690.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|261738284|gb|EEY26280.1| clp protease [Brucella sp. F5/99]
gi|261742168|gb|EEY30094.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Brucella suis
bv. 5 str. 513]
gi|262552708|gb|EEZ08698.1| ClpP [Brucella ceti M490/95/1]
gi|264660972|gb|EEZ31233.1| ClpP [Brucella pinnipedialis M292/94/1]
gi|264662762|gb|EEZ33023.1| conserved hypothetical protein [Brucella sp. 83/13]
gi|294821037|gb|EFG38036.1| Clp protease [Brucella sp. NVSL 07-0026]
gi|306275729|gb|EFM57453.1| ATP-dependent Clp protease proteolytic subunit [Brucella inopinata
BO1]
gi|306288063|gb|EFM59460.1| ATP-dependent Clp protease proteolytic subunit [Brucella sp. BO2]
gi|306406756|gb|EFM62979.1| ATP-dependent Clp protease proteolytic subunit [Brucella sp. NF
2653]
gi|340559187|gb|AEK54425.1| ATP-dependent Clp protease, proteolytic subunit [Brucella
pinnipedialis B2/94]
gi|363400766|gb|AEW17736.1| ATP-dependent Clp protease proteolytic subunit [Brucella abortus
A13334]
gi|363404846|gb|AEW15141.1| ATP-dependent Clp protease proteolytic subunit [Brucella canis HSK
A52141]
gi|374539417|gb|EHR10921.1| ATP-dependent Clp protease proteolytic subunit [Brucella abortus
bv. 1 str. NI474]
gi|374543018|gb|EHR14502.1| ATP-dependent Clp protease proteolytic subunit [Brucella abortus
bv. 1 str. NI435a]
gi|374543634|gb|EHR15116.1| ATP-dependent Clp protease proteolytic subunit [Brucella abortus
bv. 1 str. NI486]
gi|374545467|gb|EHR16928.1| ATP-dependent Clp protease proteolytic subunit [Brucella abortus
bv. 1 str. NI488]
gi|374548833|gb|EHR20280.1| ATP-dependent Clp protease proteolytic subunit [Brucella abortus
bv. 1 str. NI010]
gi|374549464|gb|EHR20907.1| ATP-dependent Clp protease proteolytic subunit [Brucella abortus
bv. 1 str. NI016]
gi|374558453|gb|EHR29846.1| ATP-dependent Clp protease proteolytic subunit [Brucella abortus
bv. 1 str. NI259]
gi|374559750|gb|EHR31135.1| ATP-dependent Clp protease proteolytic subunit [Brucella abortus
bv. 1 str. NI021]
Length = 209
Score = 268 bits (684), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 117/192 (60%), Positives = 157/192 (81%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E ++RGERAYDIFSRLLKERII +NGP+ D + +V AQLLFLE+ENP K I+
Sbjct: 10 NLVPMVVEQTNRGERAYDIFSRLLKERIIFVNGPVEDGMSMLVCAQLLFLEAENPKKEIN 69
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
MY+NSPGG VT+G+AIYDTMQ+IR P++T+C+GQAASMGSLLL +G G R ALPN+ IM
Sbjct: 70 MYINSPGGVVTSGMAIYDTMQFIRPPVSTLCMGQAASMGSLLLTAGATGHRYALPNARIM 129
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
+HQPSGG+ GQA D+ H + I+++ LN +Y KHTG+ + I++ +DRD+FMT +EA
Sbjct: 130 VHQPSGGFQGQASDIERHAQDIIKMKRRLNEIYVKHTGRDYDTIERTLDRDHFMTAQEAL 189
Query: 213 EFGIIDEVIDQR 224
EFG+ID+V++ R
Sbjct: 190 EFGLIDKVVEAR 201
>gi|148558952|ref|YP_001259031.1| ATP-dependent Clp protease proteolytic subunit [Brucella ovis ATCC
25840]
gi|297248424|ref|ZP_06932142.1| ATP-dependent Clp protease, protease subunit [Brucella abortus bv.
5 str. B3196]
gi|148370209|gb|ABQ60188.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Brucella ovis
ATCC 25840]
gi|297175593|gb|EFH34940.1| ATP-dependent Clp protease, protease subunit [Brucella abortus bv.
5 str. B3196]
Length = 228
Score = 268 bits (684), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 117/192 (60%), Positives = 157/192 (81%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E ++RGERAYDIFSRLLKERII +NGP+ D + +V AQLLFLE+ENP K I+
Sbjct: 29 NLVPMVVEQTNRGERAYDIFSRLLKERIIFVNGPVEDGMSMLVCAQLLFLEAENPKKEIN 88
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
MY+NSPGG VT+G+AIYDTMQ+IR P++T+C+GQAASMGSLLL +G G R ALPN+ IM
Sbjct: 89 MYINSPGGVVTSGMAIYDTMQFIRPPVSTLCMGQAASMGSLLLTAGATGHRYALPNARIM 148
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
+HQPSGG+ GQA D+ H + I+++ LN +Y KHTG+ + I++ +DRD+FMT +EA
Sbjct: 149 VHQPSGGFQGQASDIERHAQDIIKMKRRLNEIYVKHTGRDYDTIERTLDRDHFMTAQEAL 208
Query: 213 EFGIIDEVIDQR 224
EFG+ID+V++ R
Sbjct: 209 EFGLIDKVVEAR 220
>gi|99081368|ref|YP_613522.1| ATP-dependent Clp protease proteolytic subunit [Ruegeria sp.
TM1040]
gi|99037648|gb|ABF64260.1| ATP-dependent Clp protease proteolytic subunit ClpP [Ruegeria sp.
TM1040]
Length = 218
Score = 268 bits (684), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 119/195 (61%), Positives = 159/195 (81%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E +SRGERAYDIFSRLLKERII +NGP++D + ++VAQLL LE+ENPSK I
Sbjct: 19 TLVPMVVEQTSRGERAYDIFSRLLKERIIFLNGPVHDGMSSLIVAQLLHLEAENPSKEIS 78
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
MY+NSPGG VT+GL+IYDTMQYI+ ++T+ +GQAASMGSLLL +G G R +LPNS +M
Sbjct: 79 MYINSPGGVVTSGLSIYDTMQYIKPKVSTLVIGQAASMGSLLLTAGEAGMRFSLPNSRVM 138
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
+HQPSGGY GQA D+ IH ++ +++ LN +Y KHTGQ + I+K ++RD FM+PE+AK
Sbjct: 139 VHQPSGGYQGQATDIMIHAEETLKLKRRLNEIYVKHTGQDYDTIEKALERDNFMSPEQAK 198
Query: 213 EFGIIDEVIDQRPMA 227
EFG+IDE+++ R A
Sbjct: 199 EFGLIDEIVENRSKA 213
>gi|383410319|gb|AFH28373.1| putative ATP-dependent Clp protease proteolytic subunit,
mitochondrial precursor [Macaca mulatta]
Length = 277
Score = 268 bits (684), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 125/208 (60%), Positives = 163/208 (78%)
Query: 18 LQLSKPSAQISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVA 77
L L + +AR+ LIP+V+E + RGERAYDI+SRLL+ERI+C+ GPI+D A +V+A
Sbjct: 42 LALQRSLHATAARALPLIPIVVEQTGRGERAYDIYSRLLRERIVCVMGPIDDSVASLVIA 101
Query: 78 QLLFLESENPSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLAS 137
QLLFL+SE+ KPIHMY+NSPGG VTAGLAIYDTMQYI +PI T C+GQAASMGSLLLA+
Sbjct: 102 QLLFLQSESNKKPIHMYINSPGGVVTAGLAIYDTMQYILNPICTWCVGQAASMGSLLLAA 161
Query: 138 GTKGERRALPNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQ 197
G+ G R +LPNS IMIHQPSGG GQA D+ I ++I+++ L +Y KHT QS++VI+
Sbjct: 162 GSPGMRHSLPNSRIMIHQPSGGARGQATDIAIQAEEIMKLKKQLYNIYAKHTKQSLQVIE 221
Query: 198 KNMDRDYFMTPEEAKEFGIIDEVIDQRP 225
M+RD +M+P EA+EFGI+D+V+ P
Sbjct: 222 SAMERDRYMSPMEAQEFGILDKVLVHPP 249
>gi|259416932|ref|ZP_05740852.1| Clp protease [Silicibacter sp. TrichCH4B]
gi|259348371|gb|EEW60148.1| Clp protease [Silicibacter sp. TrichCH4B]
Length = 218
Score = 268 bits (684), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 118/192 (61%), Positives = 158/192 (82%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E +SRGERAYDIFSRLLKERII +NGP++D + ++VAQLL LE+ENPSK I
Sbjct: 19 TLVPMVVEQTSRGERAYDIFSRLLKERIIFLNGPVHDGMSSLIVAQLLHLEAENPSKEIS 78
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
MY+NSPGG VT+GL+IYDTMQYI+ ++T+ +GQAASMGSLLL +G G R +LPNS +M
Sbjct: 79 MYINSPGGVVTSGLSIYDTMQYIKPKVSTLVIGQAASMGSLLLTAGEAGMRFSLPNSRVM 138
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
+HQPSGGY GQA D+ IH ++ +++ LN +Y KHTGQ + I+K ++RD FM+PE+AK
Sbjct: 139 VHQPSGGYQGQATDIMIHAEETLKLKRRLNEIYVKHTGQDYDTIEKALERDNFMSPEQAK 198
Query: 213 EFGIIDEVIDQR 224
EFG+IDE+++ R
Sbjct: 199 EFGLIDEIVENR 210
>gi|442323969|ref|YP_007363990.1| ATP-dependent Clp protease proteolytic subunit [Myxococcus
stipitatus DSM 14675]
gi|441491611|gb|AGC48306.1| ATP-dependent Clp protease proteolytic subunit [Myxococcus
stipitatus DSM 14675]
Length = 203
Score = 268 bits (684), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 120/190 (63%), Positives = 158/190 (83%)
Query: 35 IPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHMY 94
+P VIE + RGERAYD++SRLLK+RII + P+NDD A+++VAQLLFLESE+P K I++Y
Sbjct: 3 VPFVIETTHRGERAYDLYSRLLKDRIIMLGTPVNDDVANIIVAQLLFLESEDPDKGINLY 62
Query: 95 LNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMIH 154
+NSPGG VTAGLAIYDTMQY++ P++TIC+GQAASMG+LLL +G KG+R ALPNS IMIH
Sbjct: 63 INSPGGSVTAGLAIYDTMQYVKCPVSTICVGQAASMGALLLLAGAKGKRYALPNSRIMIH 122
Query: 155 QPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKEF 214
QP GG GQA D+ I K+I+R+ LN L KHTG SIE I+K+ +RDYFM+ E+A+++
Sbjct: 123 QPLGGAQGQATDIDIQAKEILRLRSYLNGLIVKHTGHSIERIEKDTERDYFMSAEDARQY 182
Query: 215 GIIDEVIDQR 224
GIIDEV++++
Sbjct: 183 GIIDEVVEKQ 192
>gi|195473623|ref|XP_002089092.1| GE18928 [Drosophila yakuba]
gi|194175193|gb|EDW88804.1| GE18928 [Drosophila yakuba]
Length = 253
Score = 268 bits (684), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 135/243 (55%), Positives = 170/243 (69%), Gaps = 8/243 (3%)
Query: 12 SMATKFLQLSKP---SAQISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPIN 68
+ ++FLQ++ S S R+ +LIPMV+E + RGERAYDIFSRLLKERIIC+ G I
Sbjct: 4 TAVSRFLQVNSVRCGSRANSVRNINLIPMVVEQTGRGERAYDIFSRLLKERIICLMGNIT 63
Query: 69 DDTAHVVVAQLLFLESENPSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAA 128
DD + VVAQLLFL+SEN +KPIH+Y+NSPGG VTAGLAIYDTMQY++ PI T C+GQA
Sbjct: 64 DDISSTVVAQLLFLQSENVNKPIHLYINSPGGVVTAGLAIYDTMQYVKPPIATWCVGQAC 123
Query: 129 SMGSLLLASGTKGERRALPNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKH 188
SMGSLLLA+G G R +LPN+ IMIHQPSGG GQA D+ IH ++I+++ L +Y KH
Sbjct: 124 SMGSLLLAAGAPGMRYSLPNARIMIHQPSGGAQGQATDILIHAEEIIKIKRQLTNIYVKH 183
Query: 189 TGQSIEVIQKNMDRDYFMTPEEAKEFGIIDEVIDQRPMAL-----VTDAVGREGKEGKEG 243
+ E + M+RD+FMTPEEAK GIID V++ P + TD GK E
Sbjct: 184 AKNTYEEMCGRMERDHFMTPEEAKVLGIIDHVLEHPPETVSETGPATDGGVTSGKAVPEE 243
Query: 244 KEK 246
EK
Sbjct: 244 CEK 246
>gi|402903915|ref|XP_003914800.1| PREDICTED: putative ATP-dependent Clp protease proteolytic subunit,
mitochondrial [Papio anubis]
Length = 277
Score = 267 bits (683), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 123/198 (62%), Positives = 160/198 (80%)
Query: 28 SARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENP 87
+AR+ LIP+V+E + RGERAYDI+SRLL+ERI+C+ GPI+D A +V+AQLLFL+SE+
Sbjct: 52 AARALPLIPIVVEQTGRGERAYDIYSRLLRERIVCVMGPIDDSVASLVIAQLLFLQSESN 111
Query: 88 SKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALP 147
KPIHMY+NSPGG VTAGLAIYDTMQYI +PI T C+GQAASMGSLLLA+G+ G R +LP
Sbjct: 112 KKPIHMYINSPGGVVTAGLAIYDTMQYILNPICTWCVGQAASMGSLLLAAGSPGMRHSLP 171
Query: 148 NSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMT 207
NS IMIHQPSGG GQA D+ I ++I+++ L +Y KHT QS++VI+ M+RD +M+
Sbjct: 172 NSRIMIHQPSGGARGQATDIAIQAEEIMKLKKQLYNIYAKHTKQSLQVIESAMERDRYMS 231
Query: 208 PEEAKEFGIIDEVIDQRP 225
P EA+EFGI+D+V+ P
Sbjct: 232 PMEAQEFGILDKVLVHPP 249
>gi|189065189|dbj|BAG34912.1| unnamed protein product [Homo sapiens]
Length = 277
Score = 267 bits (683), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 123/198 (62%), Positives = 159/198 (80%)
Query: 28 SARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENP 87
+ R+ LIP+V+E + RGERAYDI+SRLL+ERI+C+ GPI+D A +V+AQLLFL+SE+
Sbjct: 52 ATRALPLIPIVVEQTGRGERAYDIYSRLLRERIVCVMGPIDDSVASLVIAQLLFLQSESS 111
Query: 88 SKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALP 147
KPIHMY+NSPGG VTAGLAIYDTMQYI +PI T C+GQAASMGSLLLA+GT G R +LP
Sbjct: 112 KKPIHMYINSPGGVVTAGLAIYDTMQYILNPICTWCVGQAASMGSLLLAAGTPGMRHSLP 171
Query: 148 NSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMT 207
NS IMIHQPSGG GQA D+ I ++I+++ L +Y KHT QS++VI+ M+RD +M+
Sbjct: 172 NSRIMIHQPSGGARGQATDIAIQAEEIMKLKKQLYNIYAKHTKQSLQVIESAMERDRYMS 231
Query: 208 PEEAKEFGIIDEVIDQRP 225
P EA+EFGI+D+V+ P
Sbjct: 232 PMEAQEFGILDKVLVHPP 249
>gi|91076194|ref|XP_971998.1| PREDICTED: similar to caseinolytic protease, ATP-dependent,
proteolytic subunit homolog [Tribolium castaneum]
gi|270014730|gb|EFA11178.1| hypothetical protein TcasGA2_TC004785 [Tribolium castaneum]
Length = 234
Score = 267 bits (683), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 123/215 (57%), Positives = 169/215 (78%), Gaps = 2/215 (0%)
Query: 13 MATKFLQLSKPSAQIS--ARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDD 70
M ++ ++ +K +++S R+F L+P+VIE + RGER+YDI+SRLLKERIIC+ GPIND
Sbjct: 1 MFSQLIRGTKALSKVSQPVRNFGLVPIVIEQTGRGERSYDIYSRLLKERIICLMGPINDP 60
Query: 71 TAHVVVAQLLFLESENPSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASM 130
+ ++VAQLLFL+SE+ +KPIHMY+NSPGG VTAGL IYDTMQYI PI T C+GQAASM
Sbjct: 61 MSSLIVAQLLFLQSESTNKPIHMYINSPGGSVTAGLGIYDTMQYILPPIATWCVGQAASM 120
Query: 131 GSLLLASGTKGERRALPNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTG 190
SLLLA+G+ G R +LP++ IMIHQPSGG GQA D+ I ++I+++ +N LY KHTG
Sbjct: 121 ASLLLAAGSPGMRHSLPHARIMIHQPSGGAQGQATDIKIQAEEILKLKSQINNLYVKHTG 180
Query: 191 QSIEVIQKNMDRDYFMTPEEAKEFGIIDEVIDQRP 225
++E I+++M+RD FM+P EA+ FGIID+++ P
Sbjct: 181 LALEKIERSMERDMFMSPVEAQSFGIIDKILTSPP 215
>gi|23501987|ref|NP_698114.1| ATP-dependent Clp protease proteolytic subunit [Brucella suis 1330]
gi|376280781|ref|YP_005154787.1| ATP-dependent Clp protease proteolytic subunit [Brucella suis
VBI22]
gi|384224775|ref|YP_005615939.1| ATP-dependent Clp protease proteolytic subunit [Brucella suis 1330]
gi|38257636|sp|Q8G0I4.1|CLPP_BRUSU RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|23347937|gb|AAN30029.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Brucella suis
1330]
gi|343382955|gb|AEM18447.1| ATP-dependent Clp protease proteolytic subunit [Brucella suis 1330]
gi|358258380|gb|AEU06115.1| ATP-dependent Clp protease proteolytic subunit [Brucella suis
VBI22]
Length = 209
Score = 267 bits (683), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 117/192 (60%), Positives = 157/192 (81%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E ++RGERAYDIFSRLLKERII +NGP+ D + +V AQLLFLE+ENP K I+
Sbjct: 10 NLVPMVVEQTNRGERAYDIFSRLLKERIIFVNGPVEDGMSMLVCAQLLFLEAENPKKEIN 69
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
MY+NSPGG VT+G+AIYDTMQ+IR P++T+C+GQAASMGSLLL +G G R ALPN+ IM
Sbjct: 70 MYINSPGGVVTSGMAIYDTMQFIRPPVSTLCMGQAASMGSLLLTAGATGHRYALPNARIM 129
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
+HQPSGG+ GQA D+ H + I+++ LN +Y KHTG+ + I++ +DRD+FMT +EA
Sbjct: 130 VHQPSGGFQGQASDIERHAQDIIKMKRRLNEIYVKHTGRDYDTIERTLDRDHFMTAQEAL 189
Query: 213 EFGIIDEVIDQR 224
EFG+ID+V++ R
Sbjct: 190 EFGLIDKVVEVR 201
>gi|398805269|ref|ZP_10564248.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Polaromonas
sp. CF318]
gi|398092050|gb|EJL82472.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Polaromonas
sp. CF318]
Length = 218
Score = 267 bits (683), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 118/202 (58%), Positives = 161/202 (79%)
Query: 24 SAQISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLE 83
+ + A++ ++PMVIE S RGER+YDI+SRLLKER+I + GP+ND TA++VVAQLLFLE
Sbjct: 17 AGALDAQALGMVPMVIEQSGRGERSYDIYSRLLKERVIFLVGPVNDQTANLVVAQLLFLE 76
Query: 84 SENPSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGER 143
SENP K I Y+NSPGG VTAG+AIYDTMQ+I+ ++T+C+G AASMG+ LL++G KG+R
Sbjct: 77 SENPDKDISFYINSPGGSVTAGMAIYDTMQFIKPDVSTLCVGMAASMGAFLLSAGAKGKR 136
Query: 144 RALPNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRD 203
+LPNS +MIHQPSGG GQA D+ IH + I++ D LN + +TGQ IE I+++ +RD
Sbjct: 137 FSLPNSRVMIHQPSGGAQGQATDIEIHARDILKTRDQLNRILAANTGQPIEKIERDTERD 196
Query: 204 YFMTPEEAKEFGIIDEVIDQRP 225
YFM E+AKE+G++D+VI +RP
Sbjct: 197 YFMFAEDAKEYGLVDQVIAKRP 218
>gi|83311891|ref|YP_422155.1| protease subunit of ATP-dependent Clp protease [Magnetospirillum
magneticum AMB-1]
gi|82946732|dbj|BAE51596.1| Protease subunit of ATP-dependent Clp protease [Magnetospirillum
magneticum AMB-1]
Length = 244
Score = 267 bits (683), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 120/193 (62%), Positives = 159/193 (82%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E ++RGER+YDI+SRLLKERII + G + D+ A ++ AQLLFLESENPSK I
Sbjct: 44 TLVPMVVEQTNRGERSYDIYSRLLKERIIFLTGQVYDEVASLICAQLLFLESENPSKDIA 103
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
Y+NSPGG VT+GLAIYDTMQYIR ++T+C+GQAASMGSLL+ +G KG+R +LPNS IM
Sbjct: 104 FYINSPGGVVTSGLAIYDTMQYIRPKVSTVCIGQAASMGSLLMTAGEKGKRFSLPNSRIM 163
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
+HQPSGG GQA D+ I ++I+ + LN +Y +HTGQ ++VI+K M+RD FMT +EAK
Sbjct: 164 VHQPSGGAQGQATDIEIQAREILALRARLNNIYVEHTGQPLDVIEKVMERDKFMTADEAK 223
Query: 213 EFGIIDEVIDQRP 225
EFG+IDEV+++RP
Sbjct: 224 EFGLIDEVVNKRP 236
>gi|225627583|ref|ZP_03785620.1| ATP-dependent Clp protease proteolytic subunit [Brucella ceti str.
Cudo]
gi|237815533|ref|ZP_04594530.1| ATP-dependent Clp protease proteolytic subunit [Brucella abortus
str. 2308 A]
gi|225617588|gb|EEH14633.1| ATP-dependent Clp protease proteolytic subunit [Brucella ceti str.
Cudo]
gi|237788831|gb|EEP63042.1| ATP-dependent Clp protease proteolytic subunit [Brucella abortus
str. 2308 A]
Length = 247
Score = 267 bits (683), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 117/192 (60%), Positives = 157/192 (81%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E ++RGERAYDIFSRLLKERII +NGP+ D + +V AQLLFLE+ENP K I+
Sbjct: 48 NLVPMVVEQTNRGERAYDIFSRLLKERIIFVNGPVEDGMSMLVCAQLLFLEAENPKKEIN 107
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
MY+NSPGG VT+G+AIYDTMQ+IR P++T+C+GQAASMGSLLL +G G R ALPN+ IM
Sbjct: 108 MYINSPGGVVTSGMAIYDTMQFIRPPVSTLCMGQAASMGSLLLTAGATGHRYALPNARIM 167
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
+HQPSGG+ GQA D+ H + I+++ LN +Y KHTG+ + I++ +DRD+FMT +EA
Sbjct: 168 VHQPSGGFQGQASDIERHAQDIIKMKRRLNEIYVKHTGRDYDTIERTLDRDHFMTAQEAL 227
Query: 213 EFGIIDEVIDQR 224
EFG+ID+V++ R
Sbjct: 228 EFGLIDKVVEAR 239
>gi|354479226|ref|XP_003501814.1| PREDICTED: putative ATP-dependent Clp protease proteolytic subunit,
mitochondrial-like [Cricetulus griseus]
gi|344237637|gb|EGV93740.1| Putative ATP-dependent Clp protease proteolytic subunit,
mitochondrial [Cricetulus griseus]
Length = 272
Score = 267 bits (683), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 122/198 (61%), Positives = 160/198 (80%)
Query: 28 SARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENP 87
+ R+F LIP+V+E + RGERAYDI+SRLL+ERI+C+ GPI+D A +V+AQLLFL+SE+
Sbjct: 48 ATRAFPLIPIVVEQTGRGERAYDIYSRLLRERIVCVMGPIDDSVASLVIAQLLFLQSESN 107
Query: 88 SKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALP 147
KPIHMY+NSPGG VT+GLAIYDTMQYI +PI T C+GQAASMGSLLLA+G+ G R +LP
Sbjct: 108 KKPIHMYINSPGGVVTSGLAIYDTMQYILNPICTWCVGQAASMGSLLLAAGSPGMRHSLP 167
Query: 148 NSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMT 207
NS IMIHQPSGG GQA D+ I ++I+++ L +Y KHT QS++VI+ M+RD +M+
Sbjct: 168 NSRIMIHQPSGGARGQATDIAIQAEEIMKLKKQLYNIYAKHTKQSLQVIESAMERDRYMS 227
Query: 208 PEEAKEFGIIDEVIDQRP 225
P EA+EFGI+D+V+ P
Sbjct: 228 PMEAQEFGILDKVLVHPP 245
>gi|392342214|ref|XP_001055676.3| PREDICTED: putative ATP-dependent Clp protease proteolytic subunit,
mitochondrial [Rattus norvegicus]
gi|392350502|ref|XP_217313.5| PREDICTED: putative ATP-dependent Clp protease proteolytic subunit,
mitochondrial [Rattus norvegicus]
Length = 272
Score = 267 bits (682), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 123/198 (62%), Positives = 160/198 (80%)
Query: 28 SARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENP 87
+ R+F LIP+V+E + RGERAYDI+SRLL+ERI+C+ GPI+D A +V+AQLLFL+SE+
Sbjct: 48 ATRAFPLIPIVVEQTGRGERAYDIYSRLLRERIVCVMGPIDDSVASLVIAQLLFLQSESN 107
Query: 88 SKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALP 147
KPIHMY+NSPGG VTAGLAIYDTMQYI +PI T C+GQAASMGSLLLA+G+ G R +LP
Sbjct: 108 KKPIHMYINSPGGVVTAGLAIYDTMQYILNPICTWCVGQAASMGSLLLAAGSPGMRHSLP 167
Query: 148 NSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMT 207
NS IMIHQPSGG GQA D+ I ++I+++ L +Y KHT QS++VI+ M+RD +M+
Sbjct: 168 NSRIMIHQPSGGARGQATDIAIQAEEIMKLKRQLYNIYAKHTKQSLQVIESAMERDRYMS 227
Query: 208 PEEAKEFGIIDEVIDQRP 225
P EA+EFGI+D+V+ P
Sbjct: 228 PMEAQEFGILDKVLVHPP 245
>gi|91083021|ref|XP_974664.1| PREDICTED: similar to ClpP caseinolytic peptidase, ATP-dependent,
proteolytic subunit homolog (E. coli) [Tribolium
castaneum]
gi|270007650|gb|EFA04098.1| hypothetical protein TcasGA2_TC014333 [Tribolium castaneum]
Length = 258
Score = 267 bits (682), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 123/215 (57%), Positives = 167/215 (77%), Gaps = 2/215 (0%)
Query: 13 MATKFLQLSKPSA--QISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDD 70
M+ F++LS +A ++S R F IP+V+E S RG+RAYDI+SRLL+ERIIC+ GPI D
Sbjct: 15 MSKLFVRLSTTAALNRVSVRKFGHIPIVVEQSGRGDRAYDIYSRLLRERIICLMGPITDY 74
Query: 71 TAHVVVAQLLFLESENPSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASM 130
T+ V++AQLLFL++E+ SKPIHMY+NSPGG +T+GL IYDTMQYI P+ T C+GQA SM
Sbjct: 75 TSSVIIAQLLFLQAESASKPIHMYINSPGGVITSGLGIYDTMQYILPPVATWCVGQACSM 134
Query: 131 GSLLLASGTKGERRALPNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTG 190
SL+LA+G KG R +LPNS IMIHQPSGG SGQA D+ I ++I+++ +N LY KHT
Sbjct: 135 ASLILAAGAKGMRHSLPNSRIMIHQPSGGASGQATDIKIQAEEILKMKKQINCLYVKHTE 194
Query: 191 QSIEVIQKNMDRDYFMTPEEAKEFGIIDEVIDQRP 225
++E ++++++RD FM+P EA EFGIID+V+ P
Sbjct: 195 TALERVEQSVERDNFMSPSEALEFGIIDKVLTSPP 229
>gi|348517837|ref|XP_003446439.1| PREDICTED: putative ATP-dependent Clp protease proteolytic subunit,
mitochondrial-like [Oreochromis niloticus]
Length = 270
Score = 267 bits (682), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 122/194 (62%), Positives = 159/194 (81%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
LIP+V+E + RGERAYDI+SRLL+ERIIC+ GPI+D A +V+AQLLFL+SE+ +KPIHM
Sbjct: 30 LIPIVVEQTGRGERAYDIYSRLLRERIICVMGPIDDSIASLVIAQLLFLQSESNNKPIHM 89
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VTAGLAIYDTMQYI +PI+T C+GQAASMGSLLLA+GT G R +LPN+ IM+
Sbjct: 90 YINSPGGVVTAGLAIYDTMQYILNPISTWCVGQAASMGSLLLAAGTTGMRHSLPNARIMV 149
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQPSGG GQA D+ I ++I+++ +N +Y KHTGQS+E I+ M+RD +M+P EA++
Sbjct: 150 HQPSGGARGQATDIAIQAEEILKLKRQINNIYAKHTGQSLETIESVMERDRYMSPMEAQD 209
Query: 214 FGIIDEVIDQRPMA 227
FG+ID V+ P A
Sbjct: 210 FGLIDRVLVHPPQA 223
>gi|148244363|ref|YP_001219057.1| ATP-dependent Clp protease proteolytic subunit [Candidatus
Vesicomyosocius okutanii HA]
gi|166214721|sp|A5CXJ8.1|CLPP_VESOH RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|146326190|dbj|BAF61333.1| ATP-dependent Clp protease proteolytic subunit ClpP [Candidatus
Vesicomyosocius okutanii HA]
Length = 198
Score = 267 bits (682), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 123/198 (62%), Positives = 163/198 (82%)
Query: 27 ISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESEN 86
++ ++ + IP+V+E S+RGERAYDI+SRLLKERII + GPI D A+VVVAQLLFLESEN
Sbjct: 1 MNIKNLNQIPIVVEQSARGERAYDIYSRLLKERIIFLVGPIEDYMANVVVAQLLFLESEN 60
Query: 87 PSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRAL 146
P K IH+Y+NSPGG V+AGLAIYDTMQ+I+S I+T+C+GQAASMG+LLL +GTKG+R AL
Sbjct: 61 PDKDIHLYINSPGGSVSAGLAIYDTMQFIKSDISTLCIGQAASMGALLLTAGTKGKRFAL 120
Query: 147 PNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFM 206
PN MIHQP GG+SGQA D+ IH ++I++V LN ++ HTGQ I+ IQK+ DRD FM
Sbjct: 121 PNVRCMIHQPLGGFSGQASDVDIHAQEILKVRANLNQIFKLHTGQVIKTIQKDTDRDNFM 180
Query: 207 TPEEAKEFGIIDEVIDQR 224
+ +EA ++G+ID+V+ +R
Sbjct: 181 SADEATKYGLIDKVLAKR 198
>gi|5174419|ref|NP_006003.1| putative ATP-dependent Clp protease proteolytic subunit,
mitochondrial precursor [Homo sapiens]
gi|3023512|sp|Q16740.1|CLPP_HUMAN RecName: Full=Putative ATP-dependent Clp protease proteolytic
subunit, mitochondrial; AltName: Full=Endopeptidase Clp;
Flags: Precursor
gi|62738031|pdb|1TG6|A Chain A, Crystallography And Mutagenesis Point To An Essential Role
For The N- Terminus Of Human Mitochondrial Clpp
gi|62738032|pdb|1TG6|B Chain B, Crystallography And Mutagenesis Point To An Essential Role
For The N- Terminus Of Human Mitochondrial Clpp
gi|62738033|pdb|1TG6|C Chain C, Crystallography And Mutagenesis Point To An Essential Role
For The N- Terminus Of Human Mitochondrial Clpp
gi|62738034|pdb|1TG6|D Chain D, Crystallography And Mutagenesis Point To An Essential Role
For The N- Terminus Of Human Mitochondrial Clpp
gi|62738035|pdb|1TG6|E Chain E, Crystallography And Mutagenesis Point To An Essential Role
For The N- Terminus Of Human Mitochondrial Clpp
gi|62738036|pdb|1TG6|F Chain F, Crystallography And Mutagenesis Point To An Essential Role
For The N- Terminus Of Human Mitochondrial Clpp
gi|62738037|pdb|1TG6|G Chain G, Crystallography And Mutagenesis Point To An Essential Role
For The N- Terminus Of Human Mitochondrial Clpp
gi|963048|emb|CAA90705.1| CLPP [Homo sapiens]
gi|12804197|gb|AAH02956.1| ClpP caseinolytic peptidase, ATP-dependent, proteolytic subunit
homolog (E. coli) [Homo sapiens]
gi|119589509|gb|EAW69103.1| ClpP caseinolytic peptidase, ATP-dependent, proteolytic subunit
homolog (E. coli) [Homo sapiens]
gi|123998295|gb|ABM86749.1| ClpP caseinolytic peptidase, ATP-dependent, proteolytic subunit
homolog (E. coli) [synthetic construct]
gi|157929068|gb|ABW03819.1| ClpP caseinolytic peptidase, ATP-dependent, proteolytic subunit
homolog (E. coli) [synthetic construct]
Length = 277
Score = 267 bits (682), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 123/198 (62%), Positives = 159/198 (80%)
Query: 28 SARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENP 87
+ R+ LIP+V+E + RGERAYDI+SRLL+ERI+C+ GPI+D A +V+AQLLFL+SE+
Sbjct: 52 ATRALPLIPIVVEQTGRGERAYDIYSRLLRERIVCVMGPIDDSVASLVIAQLLFLQSESN 111
Query: 88 SKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALP 147
KPIHMY+NSPGG VTAGLAIYDTMQYI +PI T C+GQAASMGSLLLA+GT G R +LP
Sbjct: 112 KKPIHMYINSPGGVVTAGLAIYDTMQYILNPICTWCVGQAASMGSLLLAAGTPGMRHSLP 171
Query: 148 NSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMT 207
NS IMIHQPSGG GQA D+ I ++I+++ L +Y KHT QS++VI+ M+RD +M+
Sbjct: 172 NSRIMIHQPSGGARGQATDIAIQAEEIMKLKKQLYNIYAKHTKQSLQVIESAMERDRYMS 231
Query: 208 PEEAKEFGIIDEVIDQRP 225
P EA+EFGI+D+V+ P
Sbjct: 232 PMEAQEFGILDKVLVHPP 249
>gi|403414739|emb|CCM01439.1| predicted protein [Fibroporia radiculosa]
Length = 257
Score = 267 bits (682), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 125/200 (62%), Positives = 158/200 (79%), Gaps = 7/200 (3%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+P+VIE + RGER+YDIFSRLL+ER+I + GPI D + + VAQLLFLE+E SKPIH
Sbjct: 52 NLVPIVIEQTGRGERSYDIFSRLLRERVIMLYGPIRDTDSALTVAQLLFLEAEETSKPIH 111
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
+Y+NSPGG VTAGLAIYDTMQY+ SPI+T C+GQA SMGSLLLA+G KG+R ALP+STIM
Sbjct: 112 LYINSPGGSVTAGLAIYDTMQYVSSPIHTYCVGQACSMGSLLLAAGEKGKRHALPHSTIM 171
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVI-------QKNMDRDYF 205
IHQPSGG SGQA D+ IH K+I+RV + L +Y KH G E + +K ++RDYF
Sbjct: 172 IHQPSGGASGQASDIAIHAKEILRVRELLTGIYQKHCGHESEHLKDGMRRFEKALERDYF 231
Query: 206 MTPEEAKEFGIIDEVIDQRP 225
MT EEA +FGI+D V+++RP
Sbjct: 232 MTAEEALQFGIVDSVLEKRP 251
>gi|89070383|ref|ZP_01157690.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Oceanicola
granulosus HTCC2516]
gi|89044030|gb|EAR50205.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Oceanicola
granulosus HTCC2516]
Length = 209
Score = 267 bits (682), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 118/193 (61%), Positives = 159/193 (82%)
Query: 32 FSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPI 91
+L+PMV+E +SRGERAYDIFSRLLKERII +NGP++D A ++VAQL+ LE+ENP K I
Sbjct: 9 MNLVPMVVEQTSRGERAYDIFSRLLKERIIFLNGPVHDGMASLIVAQLIHLEAENPKKEI 68
Query: 92 HMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTI 151
MY+NSPGG VT+GL+IYDTMQYI+ P++T+ +GQAASMGSLLLA G KG R +LPNS I
Sbjct: 69 SMYINSPGGVVTSGLSIYDTMQYIKPPVSTLVIGQAASMGSLLLAGGEKGMRLSLPNSRI 128
Query: 152 MIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEA 211
M+HQPSGGY GQA D+ IH ++ +++ LN +Y KHTGQ+++ ++ ++RD FM+PEEA
Sbjct: 129 MVHQPSGGYQGQATDIMIHAEETLKLKRRLNEIYVKHTGQTLKKVEAALERDNFMSPEEA 188
Query: 212 KEFGIIDEVIDQR 224
K++G+IDE+ + R
Sbjct: 189 KDWGLIDEIFENR 201
>gi|308798991|ref|XP_003074276.1| COG0515: Serine/threonine protein kinase (ISS) [Ostreococcus tauri]
gi|116000447|emb|CAL50127.1| COG0515: Serine/threonine protein kinase (ISS) [Ostreococcus tauri]
Length = 742
Score = 267 bits (682), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 127/225 (56%), Positives = 170/225 (75%), Gaps = 1/225 (0%)
Query: 3 SMRNLLSRTSMATKFLQLSKPSAQISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIIC 62
S R+L +AT + S S+ + R+++L+PMV+E ++RGER +DI+SRLLKERI+
Sbjct: 515 SARSLTRVNVLATPPIDRSS-SSMGTIRNYALVPMVLEQTNRGERVFDIYSRLLKERIVF 573
Query: 63 INGPINDDTAHVVVAQLLFLESENPSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTI 122
INGPI+D + + VAQLLFLES +P+ PI MY+NSPGG VTAGL IYDTMQY+ PI+T+
Sbjct: 574 INGPIDDTASSLAVAQLLFLESASPTAPIWMYVNSPGGSVTAGLGIYDTMQYVSPPIHTL 633
Query: 123 CLGQAASMGSLLLASGTKGERRALPNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALN 182
C+GQA+SM SLLLA+G KGERR+LPNS +M+HQPSGG SGQA D+ IH ++I+ V + L
Sbjct: 634 CVGQASSMASLLLAAGAKGERRSLPNSRVMLHQPSGGASGQASDIAIHAQEILNVREKLI 693
Query: 183 ALYCKHTGQSIEVIQKNMDRDYFMTPEEAKEFGIIDEVIDQRPMA 227
+Y KHT Q + I ++RD FM+P +A EFG+IDEVI+ R A
Sbjct: 694 HIYMKHTNQEYDKIGMTLERDTFMSPSDALEFGLIDEVIEHRAAA 738
>gi|147677139|ref|YP_001211354.1| protease subunit of ATP-dependent Clp proteases [Pelotomaculum
thermopropionicum SI]
gi|259585961|sp|A5D447.1|CLPP_PELTS RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|146273236|dbj|BAF58985.1| protease subunit of ATP-dependent Clp proteases [Pelotomaculum
thermopropionicum SI]
Length = 194
Score = 267 bits (682), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 119/192 (61%), Positives = 159/192 (82%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+P+V+E ++RGERAYDI+SRLLK+RII + GPI+D+TA++++AQ+LFLE+E+P K I
Sbjct: 2 NLVPIVVEQTNRGERAYDIYSRLLKDRIIFLGGPIDDNTANLIIAQMLFLEAEDPEKDIQ 61
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
Y+NSPGG VTAG+AIYDTMQY+RSP+ TIC+GQAASM SLLLA+G KG+R +LP + I+
Sbjct: 62 FYINSPGGVVTAGMAIYDTMQYVRSPVATICIGQAASMASLLLAAGAKGKRYSLPYARIL 121
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQP GG GQA D+ IH K+I+R+ LN + +HTGQ IE I ++ +RDYFM+ +EAK
Sbjct: 122 IHQPLGGVQGQATDIEIHAKEILRMRQFLNEILSRHTGQPIEKIARDTERDYFMSAQEAK 181
Query: 213 EFGIIDEVIDQR 224
E+GIIDEV D R
Sbjct: 182 EYGIIDEVYDVR 193
>gi|121605848|ref|YP_983177.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Polaromonas
naphthalenivorans CJ2]
gi|120594817|gb|ABM38256.1| ATP-dependent Clp protease proteolytic subunit ClpP [Polaromonas
naphthalenivorans CJ2]
Length = 216
Score = 267 bits (682), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 119/205 (58%), Positives = 161/205 (78%)
Query: 21 SKPSAQISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLL 80
S +A + ++PMVIE S RGER+YDI+SRLLKER+I + GP+ND TA++VVAQLL
Sbjct: 12 SPQAASQEIQGLGMVPMVIEQSGRGERSYDIYSRLLKERVIFLVGPVNDQTANLVVAQLL 71
Query: 81 FLESENPSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTK 140
FLESENP K I Y+NSPGG VTAG+AIYDTMQ+I+ ++T+C+G AASMG+ LL+SGTK
Sbjct: 72 FLESENPDKDISFYINSPGGSVTAGMAIYDTMQFIKPDVSTLCVGMAASMGAFLLSSGTK 131
Query: 141 GERRALPNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNM 200
G+R +LPNS +MIHQPSGG GQA D+ IH + I++ D LN + +TGQ++E I+++
Sbjct: 132 GKRFSLPNSRVMIHQPSGGAQGQASDIEIHARDILKTRDQLNRILAHNTGQTVEKIERDT 191
Query: 201 DRDYFMTPEEAKEFGIIDEVIDQRP 225
+RDYFM +EAK +G++D+VI +RP
Sbjct: 192 ERDYFMFADEAKAYGVVDQVISKRP 216
>gi|421598923|ref|ZP_16042241.1| endopeptidase Clp [Bradyrhizobium sp. CCGE-LA001]
gi|404268968|gb|EJZ33330.1| endopeptidase Clp [Bradyrhizobium sp. CCGE-LA001]
Length = 211
Score = 267 bits (682), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 118/192 (61%), Positives = 157/192 (81%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E ++RGERAYDIFSRLLKERII + GP+ D + +VVAQLLFLE+ENP K I
Sbjct: 10 NLVPMVVEQTNRGERAYDIFSRLLKERIIFLTGPVEDGMSTLVVAQLLFLEAENPKKEIS 69
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
MY+NSPGG VT+GLAIYDTMQ+IR P++T+C GQAASMGSLLLA+G K R +LPN+ IM
Sbjct: 70 MYINSPGGVVTSGLAIYDTMQFIRPPVSTLCTGQAASMGSLLLAAGEKDMRFSLPNARIM 129
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
+HQPSGG+ GQA D+ +H ++I+ + LN +Y KHTGQ+ + I+ ++RD F+T +AK
Sbjct: 130 VHQPSGGFQGQATDIMLHAQEILNLKKRLNEIYVKHTGQTYKTIEDALERDKFLTANDAK 189
Query: 213 EFGIIDEVIDQR 224
EFG++D+VID+R
Sbjct: 190 EFGLVDKVIDKR 201
>gi|254460423|ref|ZP_05073839.1| Clp protease [Rhodobacterales bacterium HTCC2083]
gi|206677012|gb|EDZ41499.1| Clp protease [Rhodobacteraceae bacterium HTCC2083]
Length = 210
Score = 266 bits (681), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 118/193 (61%), Positives = 158/193 (81%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E +SRGERAYDIFSRLLKERII +NGP++D + ++VAQLL LE+ENPSK I
Sbjct: 11 TLVPMVVEQTSRGERAYDIFSRLLKERIIFLNGPVHDGMSSLIVAQLLHLEAENPSKEIS 70
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
MY+NSPGG VT+GL+IYDTMQYIR ++T+ +GQAASMGSLLL +G K R +LPNS +M
Sbjct: 71 MYINSPGGVVTSGLSIYDTMQYIRPKVSTLVIGQAASMGSLLLTAGEKDMRFSLPNSRVM 130
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
+HQPSGGY GQA D+ IH ++ ++ LN +Y +HTGQ+++ ++ ++RD FM+PEEAK
Sbjct: 131 VHQPSGGYQGQATDIMIHAQETQKLKTRLNEIYVQHTGQTLKKVEAALERDNFMSPEEAK 190
Query: 213 EFGIIDEVIDQRP 225
EFG+IDE++ RP
Sbjct: 191 EFGLIDEILQTRP 203
>gi|182679147|ref|YP_001833293.1| endopeptidase Clp [Beijerinckia indica subsp. indica ATCC 9039]
gi|182635030|gb|ACB95804.1| Endopeptidase Clp [Beijerinckia indica subsp. indica ATCC 9039]
Length = 217
Score = 266 bits (681), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 124/201 (61%), Positives = 159/201 (79%), Gaps = 2/201 (0%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
LIP VIE++SRGER +DI+SRLL+ERII + G + D+ A V++AQLLFLE+ENP K I M
Sbjct: 16 LIPQVIENTSRGERGFDIYSRLLRERIIFLTGQVEDNMASVIIAQLLFLEAENPKKEISM 75
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VTAGLAIYDTMQ+IR ++T+C+GQAASMGSLLL +G G R A PNS IM+
Sbjct: 76 YINSPGGVVTAGLAIYDTMQFIRPKVSTLCVGQAASMGSLLLCAGEAGMRYATPNSRIMV 135
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQPSGG+SGQA D+ H + I++V LN +Y KHTG+ + I+ +DRD+FM+ +E KE
Sbjct: 136 HQPSGGFSGQASDILRHAEDIMKVKRRLNEIYVKHTGRDYDTIETTLDRDHFMSAQETKE 195
Query: 214 FGIIDEVIDQRP--MALVTDA 232
FGIID VID+RP +AL T+A
Sbjct: 196 FGIIDNVIDKRPDELALTTEA 216
>gi|194761774|ref|XP_001963100.1| GF15771 [Drosophila ananassae]
gi|190616797|gb|EDV32321.1| GF15771 [Drosophila ananassae]
Length = 252
Score = 266 bits (681), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 123/196 (62%), Positives = 153/196 (78%)
Query: 30 RSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSK 89
R+ +LIPMV+E + RGERAYDIFSRLLKERIIC+ G I DD + VVAQLLFL+SEN +K
Sbjct: 25 RNINLIPMVVEQTGRGERAYDIFSRLLKERIICLMGNITDDISSTVVAQLLFLQSENVNK 84
Query: 90 PIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNS 149
PIH+Y+NSPGG VTAGLAIYDTMQY++ PI T C+GQA SMGSLLLA+G G R +LPN+
Sbjct: 85 PIHLYINSPGGVVTAGLAIYDTMQYVKPPIATWCVGQACSMGSLLLAAGAPGMRYSLPNA 144
Query: 150 TIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPE 209
IMIHQPSGG GQA D+ IH ++I+++ L ++Y KH S + + M+RD+FMTPE
Sbjct: 145 RIMIHQPSGGAQGQATDILIHAEEIIKIKRQLTSIYVKHAKNSYDEMCSRMERDHFMTPE 204
Query: 210 EAKEFGIIDEVIDQRP 225
EAK GIID V++ P
Sbjct: 205 EAKTLGIIDHVLEHPP 220
>gi|399910853|ref|ZP_10779167.1| ATP-dependent Clp protease proteolytic subunit [Halomonas sp. KM-1]
Length = 206
Score = 266 bits (681), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 118/192 (61%), Positives = 156/192 (81%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
L+PMV+E S+RGERAYDI+SRLLKER+I + GP+ D A+++VAQLLFLESENP K IH+
Sbjct: 13 LVPMVVEQSARGERAYDIYSRLLKERVIFLVGPVEDHMANLIVAQLLFLESENPDKDIHL 72
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VTAG+AIYDTMQ+I+ ++T+C+GQAASMG+LLLA G G+R +LP+S +MI
Sbjct: 73 YINSPGGAVTAGMAIYDTMQFIKPDVSTVCIGQAASMGALLLAGGASGKRYSLPHSRMMI 132
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQP GGY GQA D+ IHT++I+ + D LN + HTGQ IE I ++ DRD FM+ +A E
Sbjct: 133 HQPLGGYQGQAADIEIHTREILGIRDKLNRILAHHTGQDIETIARDTDRDNFMSGTQATE 192
Query: 214 FGIIDEVIDQRP 225
+G+ID V+D+RP
Sbjct: 193 YGLIDAVLDKRP 204
>gi|384218431|ref|YP_005609597.1| ATP-dependent Clp protease, proteolytic subunit [Bradyrhizobium
japonicum USDA 6]
gi|354957330|dbj|BAL10009.1| ATP-dependent Clp protease, proteolytic subunit [Bradyrhizobium
japonicum USDA 6]
Length = 210
Score = 266 bits (681), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 118/192 (61%), Positives = 157/192 (81%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E ++RGERAYDIFSRLLKERII + GP+ D + +VVAQLLFLE+ENP K I
Sbjct: 10 NLVPMVVEQTNRGERAYDIFSRLLKERIIFLTGPVEDGMSTLVVAQLLFLEAENPKKEIS 69
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
MY+NSPGG VT+GLAIYDTMQ+IR P++T+C GQAASMGSLLLA+G K R +LPN+ IM
Sbjct: 70 MYINSPGGVVTSGLAIYDTMQFIRPPVSTLCTGQAASMGSLLLAAGEKDMRFSLPNARIM 129
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
+HQPSGG+ GQA D+ +H ++I+ + LN +Y KHTGQ+ + I+ ++RD F+T +AK
Sbjct: 130 VHQPSGGFQGQATDIMLHAQEILNLKKRLNEIYVKHTGQTYKTIEDALERDKFLTANDAK 189
Query: 213 EFGIIDEVIDQR 224
EFG++D+VID+R
Sbjct: 190 EFGLVDKVIDKR 201
>gi|27380055|ref|NP_771584.1| ATP-dependent Clp protease proteolytic subunit [Bradyrhizobium
japonicum USDA 110]
gi|67460543|sp|Q89KG1.1|CLPP2_BRAJA RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|27353209|dbj|BAC50209.1| ATP-dependent Clp protease proteolytic subunit [Bradyrhizobium
japonicum USDA 110]
Length = 211
Score = 266 bits (681), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 118/192 (61%), Positives = 156/192 (81%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E ++RGERAYDIFSRLLKERII + GP+ D + +VVAQLLFLE+ENP K I
Sbjct: 10 NLVPMVVEQTNRGERAYDIFSRLLKERIIFLTGPVEDGMSTLVVAQLLFLEAENPKKEIS 69
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
MY+NSPGG VT+GLAIYDTMQ+IR P++T+C GQAASMGSLLLA+G K R +LPN+ IM
Sbjct: 70 MYINSPGGVVTSGLAIYDTMQFIRPPVSTLCTGQAASMGSLLLAAGEKDMRFSLPNARIM 129
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
+HQPSGG+ GQA D+ +H ++I+ + LN +Y KHTGQ+ + I+ ++RD F+T +AK
Sbjct: 130 VHQPSGGFQGQATDIMLHAQEILNLKKRLNEIYVKHTGQTYKTIEDALERDKFLTANDAK 189
Query: 213 EFGIIDEVIDQR 224
EFG++D VID+R
Sbjct: 190 EFGLVDRVIDKR 201
>gi|407785099|ref|ZP_11132247.1| ATP-dependent Clp protease proteolytic subunit [Celeribacter
baekdonensis B30]
gi|407203131|gb|EKE73118.1| ATP-dependent Clp protease proteolytic subunit [Celeribacter
baekdonensis B30]
Length = 207
Score = 266 bits (681), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 118/192 (61%), Positives = 156/192 (81%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E +SRGERAYDIFSRLLKERII +NGP++D + ++ AQLLFLE+ENP K I
Sbjct: 11 TLVPMVVEQTSRGERAYDIFSRLLKERIIFLNGPVHDGMSSLICAQLLFLEAENPKKEIA 70
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
MY+NSPGG VT+GL+IYDTMQYIR ++T+ +GQAASMGSLLL +G KG R +LPNS +M
Sbjct: 71 MYINSPGGVVTSGLSIYDTMQYIRPKVSTLVMGQAASMGSLLLTAGEKGMRFSLPNSRVM 130
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
+HQPSGGY GQA D+ IH K+ ++ D LN +Y KHTGQ++ + ++RD FM+PE+AK
Sbjct: 131 VHQPSGGYQGQATDIMIHAKETQKLKDRLNEIYVKHTGQTMGTVVDALERDNFMSPEDAK 190
Query: 213 EFGIIDEVIDQR 224
FG+IDE+++ R
Sbjct: 191 AFGLIDEIVESR 202
>gi|66472380|ref|NP_001018520.1| putative ATP-dependent Clp protease proteolytic subunit,
mitochondrial [Danio rerio]
gi|63102525|gb|AAH95769.1| ClpP caseinolytic peptidase, ATP-dependent, proteolytic subunit
homolog (E. coli) [Danio rerio]
Length = 266
Score = 266 bits (681), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 125/210 (59%), Positives = 166/210 (79%)
Query: 18 LQLSKPSAQISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVA 77
L++S+ Q S S LIP+V+E + RGERAYDI+SRLL+ERIIC+ GPI+D A +V+A
Sbjct: 13 LRVSRSVHQSSPWSSPLIPIVVEQTGRGERAYDIYSRLLRERIICVMGPIDDSVASLVIA 72
Query: 78 QLLFLESENPSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLAS 137
QLLFL+SE+ +KPIHMY+NSPGG VT+G AIYDTMQYI +PI+T C+GQAASMGSLLLA+
Sbjct: 73 QLLFLQSESNNKPIHMYINSPGGVVTSGPAIYDTMQYILNPISTWCVGQAASMGSLLLAA 132
Query: 138 GTKGERRALPNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQ 197
GT G R +LPN+ IM+HQPSGG GQA D+ I ++I+++ +N +Y KHTGQ +E I+
Sbjct: 133 GTAGMRHSLPNARIMVHQPSGGARGQATDIAIQAEEILKLKRQINNIYSKHTGQLLETIE 192
Query: 198 KNMDRDYFMTPEEAKEFGIIDEVIDQRPMA 227
M+RD +M+P EA++FGIID+V+ P A
Sbjct: 193 SVMERDRYMSPMEAQDFGIIDKVLVHPPQA 222
>gi|85716433|ref|ZP_01047405.1| peptidase S14, ClpP [Nitrobacter sp. Nb-311A]
gi|85696790|gb|EAQ34676.1| peptidase S14, ClpP [Nitrobacter sp. Nb-311A]
Length = 212
Score = 266 bits (681), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 118/192 (61%), Positives = 156/192 (81%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E ++RGERAYDIFSRLLKERII + GP+ D + +VVAQLLFLE+ENP K I
Sbjct: 10 NLVPMVVEQTNRGERAYDIFSRLLKERIIFVTGPVEDTMSMLVVAQLLFLEAENPKKEIS 69
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
MY+NSPGG VT+GLAIYDTMQ+IR P+ T+C GQAASMGSLLLA+G K R ALPN+ IM
Sbjct: 70 MYINSPGGVVTSGLAIYDTMQFIRPPVATLCTGQAASMGSLLLAAGEKDMRHALPNARIM 129
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
+HQPSGG+ GQA D+ +H ++I+ + LN +Y KHTGQ+ + I+ ++RD F+T + A+
Sbjct: 130 VHQPSGGFQGQATDIMLHAQEILSLKKRLNEIYVKHTGQTYQAIEDALERDKFLTADMAR 189
Query: 213 EFGIIDEVIDQR 224
+FGI+D+VID+R
Sbjct: 190 DFGIVDKVIDKR 201
>gi|351713501|gb|EHB16420.1| Putative ATP-dependent Clp protease proteolytic subunit,
mitochondrial [Heterocephalus glaber]
Length = 272
Score = 266 bits (681), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 122/198 (61%), Positives = 159/198 (80%)
Query: 28 SARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENP 87
+ R+ LIP+V+E + RGERAYDI+SRLL+ERI+C+ GPI+D A +V+AQLLFL+SE+
Sbjct: 48 AVRALPLIPIVVEQTGRGERAYDIYSRLLRERIVCVMGPIDDTVASLVIAQLLFLQSESN 107
Query: 88 SKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALP 147
KPIHMY+NSPGG VTAGLAIYDTMQYI +PI T C+GQAASMGSLLLA+G+ G R +LP
Sbjct: 108 KKPIHMYINSPGGVVTAGLAIYDTMQYILNPICTWCVGQAASMGSLLLAAGSPGMRHSLP 167
Query: 148 NSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMT 207
NS IMIHQPSGG GQA D+ I ++I+++ L +Y KHT QS++VI+ M+RD +M+
Sbjct: 168 NSRIMIHQPSGGARGQATDIAIQAEEIMKLKKQLYNIYAKHTKQSLQVIESAMERDRYMS 227
Query: 208 PEEAKEFGIIDEVIDQRP 225
P EA+EFGI+D+V+ P
Sbjct: 228 PMEAQEFGILDKVLVHPP 245
>gi|194859835|ref|XP_001969460.1| GG10114 [Drosophila erecta]
gi|190661327|gb|EDV58519.1| GG10114 [Drosophila erecta]
Length = 253
Score = 266 bits (681), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 124/198 (62%), Positives = 153/198 (77%)
Query: 28 SARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENP 87
S R+ +LIPMV+E + RGERAYDIFSRLLKERIIC+ G I DD + VVAQLLFL+SEN
Sbjct: 23 SVRNINLIPMVVEQTGRGERAYDIFSRLLKERIICLMGNITDDISSTVVAQLLFLQSENV 82
Query: 88 SKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALP 147
+KPIH+Y+NSPGG VTAGLAIYDTMQY++ PI T C+GQA SMGSLLLA+G G R +LP
Sbjct: 83 NKPIHLYINSPGGVVTAGLAIYDTMQYVKPPIATWCVGQACSMGSLLLAAGAPGMRYSLP 142
Query: 148 NSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMT 207
N+ IMIHQPSGG GQA D+ IH ++I+++ L +Y KH + E + M+RD+FMT
Sbjct: 143 NARIMIHQPSGGAQGQATDILIHAEEIIKIKRQLTNIYVKHAKNTYEEMCGRMERDHFMT 202
Query: 208 PEEAKEFGIIDEVIDQRP 225
PEEAK GIID V++ P
Sbjct: 203 PEEAKVLGIIDHVLEHPP 220
>gi|254467045|ref|ZP_05080456.1| Clp protease [Rhodobacterales bacterium Y4I]
gi|206687953|gb|EDZ48435.1| Clp protease [Rhodobacterales bacterium Y4I]
Length = 202
Score = 266 bits (681), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 117/192 (60%), Positives = 156/192 (81%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E +SRGERAYDIFSRLLKERII +NGP++D + ++VAQLL LE+ENPSK I
Sbjct: 3 TLVPMVVEQTSRGERAYDIFSRLLKERIIFVNGPVHDGMSSLIVAQLLHLEAENPSKEIS 62
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
MY+NSPGG VT+GL+IYDTMQYI+ ++T+ +GQAASMGSLLL +G KG R +LPNS +M
Sbjct: 63 MYINSPGGVVTSGLSIYDTMQYIKPKVSTLVIGQAASMGSLLLTAGEKGMRFSLPNSRVM 122
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
+HQPSGG+ GQA D+ IH ++ +++ LN +Y KHTGQ E + ++RD FM+PEEAK
Sbjct: 123 VHQPSGGFQGQATDIMIHAEETLKLKKRLNEIYVKHTGQDYETVVNALERDNFMSPEEAK 182
Query: 213 EFGIIDEVIDQR 224
FG+IDE+++ R
Sbjct: 183 AFGLIDEIVENR 194
>gi|414153433|ref|ZP_11409759.1| ATP-dependent Clp protease proteolytic subunit [Desulfotomaculum
hydrothermale Lam5 = DSM 18033]
gi|411455112|emb|CCO07662.1| ATP-dependent Clp protease proteolytic subunit [Desulfotomaculum
hydrothermale Lam5 = DSM 18033]
Length = 195
Score = 266 bits (680), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 121/191 (63%), Positives = 156/191 (81%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
L+P+V+E ++RGERAYDI+SRLLK+RII I GPI+D A +V+AQ LFLE+E+P K IH+
Sbjct: 4 LVPIVVEQTNRGERAYDIYSRLLKDRIIFIGGPIDDHVADLVIAQFLFLEAEDPEKDIHL 63
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VTAGLAIYDTMQYI+ P++TICLGQA+SMGS LLA+GTKG+R ALP + IMI
Sbjct: 64 YINSPGGVVTAGLAIYDTMQYIKPPVSTICLGQASSMGSFLLAAGTKGKRYALPMARIMI 123
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQP GG GQA D+ IH K+I+R+ D LN HTGQ +E + ++ +RD+FM+ EEAK+
Sbjct: 124 HQPLGGVQGQATDIDIHAKEILRMKDLLNEKLAYHTGQPLEKVARDTERDFFMSAEEAKQ 183
Query: 214 FGIIDEVIDQR 224
+GIIDEV+ R
Sbjct: 184 YGIIDEVMPYR 194
>gi|373450697|ref|ZP_09542668.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Wolbachia pipientis wAlbB]
gi|371932099|emb|CCE77680.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Wolbachia pipientis wAlbB]
Length = 213
Score = 266 bits (680), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 124/196 (63%), Positives = 156/196 (79%)
Query: 29 ARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPS 88
+ +LIP+V+E +SRGERAYDI+SRL+KERII + GPI D+ A V+VAQLLFLESENP
Sbjct: 3 GKGMTLIPIVVEQTSRGERAYDIYSRLVKERIIFVTGPIEDNMASVIVAQLLFLESENPD 62
Query: 89 KPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPN 148
K I MY+NSPGG VTAGL+IYDTMQYI ++T+C+GQAASMGSLLL +G +G+R +LP+
Sbjct: 63 KDICMYINSPGGVVTAGLSIYDTMQYINPDVSTLCIGQAASMGSLLLTAGAEGKRYSLPH 122
Query: 149 STIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTP 208
S IMIHQPSGGY GQA D+ IH +I+RV LN +Y KHTG S++ I+ M+RD FM P
Sbjct: 123 SRIMIHQPSGGYRGQATDIEIHANEILRVKKKLNQIYEKHTGNSLKKIEGMMERDKFMDP 182
Query: 209 EEAKEFGIIDEVIDQR 224
EEA + G+ID VI +R
Sbjct: 183 EEAMKIGLIDRVIAER 198
>gi|260892392|ref|YP_003238489.1| ATP-dependent Clp protease proteolytic subunit [Ammonifex degensii
KC4]
gi|260864533|gb|ACX51639.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Ammonifex
degensii KC4]
Length = 200
Score = 266 bits (680), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 119/191 (62%), Positives = 157/191 (82%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
L+P+V+E +SRGERAYDI+SRLLK+RII I GPI+D A++V+AQLLFLE+E+P K IH+
Sbjct: 5 LVPIVVEQTSRGERAYDIYSRLLKDRIIFIGGPIDDHLANLVIAQLLFLEAEDPEKDIHL 64
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VTAG+AIYDTMQYIR ++TICLGQAASM + LLA+G KG+R ALP + IM+
Sbjct: 65 YINSPGGLVTAGMAIYDTMQYIRPDVSTICLGQAASMAAFLLAAGAKGKRYALPYARIML 124
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQP GG+ GQA ++ IH ++I+R+ LN L KHTGQ +E I ++ DRD+FMT ++AK+
Sbjct: 125 HQPLGGFQGQATEVEIHAREIMRMRQVLNELLSKHTGQPVEKIAQDTDRDFFMTAQQAKD 184
Query: 214 FGIIDEVIDQR 224
+G+IDEVI R
Sbjct: 185 YGLIDEVITMR 195
>gi|406706127|ref|YP_006756480.1| ATP-dependent Clp protease proteolytic subunit ClpP [alpha
proteobacterium HIMB5]
gi|406651903|gb|AFS47303.1| ATP-dependent Clp protease proteolytic subunit ClpP [alpha
proteobacterium HIMB5]
Length = 203
Score = 266 bits (680), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 116/192 (60%), Positives = 158/192 (82%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E SS+GERAYDI+SRLLKERII + G IND+ A +V AQLLFLE+E+P K I+
Sbjct: 11 TLVPMVVEQSSKGERAYDIYSRLLKERIIFLTGQINDNVASLVTAQLLFLEAEDPKKEIY 70
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
+Y+NSPGG VTAGL IYDTMQYI+ I+T+C+GQAASMGS LLA+G+KG+R +LPNS +M
Sbjct: 71 LYINSPGGLVTAGLGIYDTMQYIKPEISTLCIGQAASMGSFLLAAGSKGKRFSLPNSRVM 130
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
+HQPS G+ GQA D+ IH +++ + LN +Y KHTG+S++ I+ ++RD FMT + AK
Sbjct: 131 VHQPSAGFQGQATDIEIHANEVLSLKKRLNEIYSKHTGKSVDEIKSALERDNFMTADAAK 190
Query: 213 EFGIIDEVIDQR 224
+FG+IDEV+++R
Sbjct: 191 QFGLIDEVVEKR 202
>gi|163759316|ref|ZP_02166402.1| ATP-dependent Clp protease proteolytic subunit [Hoeflea
phototrophica DFL-43]
gi|162283720|gb|EDQ34005.1| ATP-dependent Clp protease proteolytic subunit [Hoeflea
phototrophica DFL-43]
Length = 210
Score = 266 bits (680), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 119/194 (61%), Positives = 154/194 (79%)
Query: 31 SFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKP 90
+ +L+PMV+E ++RGER+YDIFSRLLKERII I GP+ D A +V AQLLFLE+ENP K
Sbjct: 8 AMALVPMVVEQTNRGERSYDIFSRLLKERIIFITGPVEDHMATLVCAQLLFLEAENPKKE 67
Query: 91 IHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNST 150
I +Y+NSPGG VTAG+AIYDTMQ+I+ I+T+C+GQAASMGSLLL +G KG R A PN+
Sbjct: 68 IALYINSPGGVVTAGMAIYDTMQFIKPAISTLCVGQAASMGSLLLCAGEKGMRFATPNAR 127
Query: 151 IMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEE 210
+M+HQPSGG+ GQA D+ H + I+++ LN +Y KHTGQ E ++K +DRD+FMT EE
Sbjct: 128 VMVHQPSGGFQGQASDIERHAQDIIKMKRRLNEVYVKHTGQDYETVEKTLDRDHFMTAEE 187
Query: 211 AKEFGIIDEVIDQR 224
A EFG+ID V D+R
Sbjct: 188 ALEFGLIDRVFDKR 201
>gi|242015536|ref|XP_002428409.1| ATP-dependent Clp protease proteolytic subunit, putative [Pediculus
humanus corporis]
gi|212513021|gb|EEB15671.1| ATP-dependent Clp protease proteolytic subunit, putative [Pediculus
humanus corporis]
Length = 252
Score = 266 bits (680), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 122/192 (63%), Positives = 153/192 (79%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
LIP+VIE + RGERAYDI+SRLLKERIIC+ G I+D+ + VV+AQLLFL+SEN KP+HM
Sbjct: 41 LIPVVIEQTGRGERAYDIYSRLLKERIICVMGQIHDELSSVVIAQLLFLQSENSKKPVHM 100
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VTAGL IYDTMQYI P+ T C+GQA SM SLLLA+G G R ALPN+ IMI
Sbjct: 101 YINSPGGSVTAGLGIYDTMQYILPPVATWCVGQACSMASLLLAAGASGMRHALPNARIMI 160
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQPSGG GQA D+ I ++I+++ +N LY KHTG SIE I+++M+RD FM P +AKE
Sbjct: 161 HQPSGGVQGQATDIQIQAEEILKLKKQINHLYVKHTGLSIEKIEQSMERDKFMNPSDAKE 220
Query: 214 FGIIDEVIDQRP 225
FGIID++++ P
Sbjct: 221 FGIIDKILNHPP 232
>gi|448747538|ref|ZP_21729195.1| Peptidase S14/S49 [Halomonas titanicae BH1]
gi|445564818|gb|ELY20933.1| Peptidase S14/S49 [Halomonas titanicae BH1]
Length = 205
Score = 266 bits (680), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 115/192 (59%), Positives = 156/192 (81%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
L+PMV+E S++GERAYDI+SRLLKER+I + GP+ D A++VVAQLLFLESENP K IH+
Sbjct: 12 LVPMVVEQSAKGERAYDIYSRLLKERVIFLVGPVEDYMANLVVAQLLFLESENPDKDIHL 71
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VTAG++IYDTMQ+++ ++T+C+GQAASMG+LLL +G G+R LPNS +MI
Sbjct: 72 YINSPGGSVTAGMSIYDTMQFVKPDVSTVCIGQAASMGALLLTAGAAGKRYCLPNSRVMI 131
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQP GGY GQA D+ IHT++I+ + + LN + HTGQ IE + ++ DRD FM+ +AKE
Sbjct: 132 HQPLGGYQGQASDIEIHTREILGIREKLNQILAHHTGQEIEAVSRDTDRDNFMSANQAKE 191
Query: 214 FGIIDEVIDQRP 225
+G+ID V+D+RP
Sbjct: 192 YGLIDAVLDKRP 203
>gi|149028159|gb|EDL83597.1| similar to Putative ATP-dependent Clp protease proteolytic subunit,
mitochondrial precursor (Endopeptidase Clp) [Rattus
norvegicus]
Length = 333
Score = 266 bits (680), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 123/198 (62%), Positives = 160/198 (80%)
Query: 28 SARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENP 87
+ R+F LIP+V+E + RGERAYDI+SRLL+ERI+C+ GPI+D A +V+AQLLFL+SE+
Sbjct: 109 ATRAFPLIPIVVEQTGRGERAYDIYSRLLRERIVCVMGPIDDSVASLVIAQLLFLQSESN 168
Query: 88 SKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALP 147
KPIHMY+NSPGG VTAGLAIYDTMQYI +PI T C+GQAASMGSLLLA+G+ G R +LP
Sbjct: 169 KKPIHMYINSPGGVVTAGLAIYDTMQYILNPICTWCVGQAASMGSLLLAAGSPGMRHSLP 228
Query: 148 NSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMT 207
NS IMIHQPSGG GQA D+ I ++I+++ L +Y KHT QS++VI+ M+RD +M+
Sbjct: 229 NSRIMIHQPSGGARGQATDIAIQAEEIMKLKRQLYNIYAKHTKQSLQVIESAMERDRYMS 288
Query: 208 PEEAKEFGIIDEVIDQRP 225
P EA+EFGI+D+V+ P
Sbjct: 289 PMEAQEFGILDKVLVHPP 306
>gi|357974124|ref|ZP_09138095.1| ATP-dependent Clp protease proteolytic subunit [Sphingomonas sp.
KC8]
Length = 224
Score = 266 bits (680), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 124/208 (59%), Positives = 159/208 (76%)
Query: 19 QLSKPSAQISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQ 78
Q + P + + +L+P+VIE S+RGER++DI+SRLL+ERII + G + D A ++ AQ
Sbjct: 9 QFTPPGYHVDPITGALVPIVIEQSNRGERSFDIYSRLLRERIIFVTGAVEDHMASIITAQ 68
Query: 79 LLFLESENPSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASG 138
LLFLESENP K I MY+NSPGG VTAGLAI+DTMQYIR + T+C+GQAASMGS LLA+G
Sbjct: 69 LLFLESENPKKDIFMYINSPGGVVTAGLAIHDTMQYIRPRVGTVCIGQAASMGSFLLAAG 128
Query: 139 TKGERRALPNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQK 198
G R AL NS IMIHQPSGG G A D+ I K+I+R+ + LN+LY K+TG+ IEVI+
Sbjct: 129 EPGMRMALTNSRIMIHQPSGGAQGMASDIEIQAKEILRMRNRLNSLYAKYTGKPIEVIEA 188
Query: 199 NMDRDYFMTPEEAKEFGIIDEVIDQRPM 226
MDRD F+ +EAKEFG+IDEV D+RP+
Sbjct: 189 AMDRDKFLEADEAKEFGLIDEVFDKRPL 216
>gi|316933821|ref|YP_004108803.1| endopeptidase Clp [Rhodopseudomonas palustris DX-1]
gi|315601535|gb|ADU44070.1| Endopeptidase Clp [Rhodopseudomonas palustris DX-1]
Length = 212
Score = 266 bits (680), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 118/193 (61%), Positives = 157/193 (81%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E ++RGERAYDIFSRLLKERII + GP+ D + ++VAQLLFLE+ENP K I
Sbjct: 10 NLVPMVVEQTNRGERAYDIFSRLLKERIIFVTGPVEDGMSTLIVAQLLFLEAENPKKEIS 69
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
MY+NSPGG VT+GLAIYDTMQ+IR P++T+C GQAASMGSLLLA+G K R +LPN+ IM
Sbjct: 70 MYINSPGGVVTSGLAIYDTMQFIRPPVSTLCTGQAASMGSLLLAAGHKDMRFSLPNARIM 129
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
+HQPSGG+ GQA D+ +H ++I+ + LN +Y HTGQ+ + I+ ++RD F+T E A+
Sbjct: 130 VHQPSGGFQGQATDIMLHAQEILNLKKRLNEIYVHHTGQTYKAIEDALERDKFLTAEMAR 189
Query: 213 EFGIIDEVIDQRP 225
EFGI+D+VID+RP
Sbjct: 190 EFGIVDKVIDKRP 202
>gi|365895292|ref|ZP_09433413.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Bradyrhizobium sp. STM 3843]
gi|365424011|emb|CCE05955.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Bradyrhizobium sp. STM 3843]
Length = 210
Score = 266 bits (680), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 119/193 (61%), Positives = 157/193 (81%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E ++RGERAYDIFSRLLKERII + GP+ D + ++VAQLLFLE+ENP K I
Sbjct: 10 NLVPMVVEQTNRGERAYDIFSRLLKERIIFVTGPVEDGMSTLIVAQLLFLEAENPKKEIA 69
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
MY+NSPGG VT+GLAIYDTMQ+IR ++T+C GQAASMGSLLL++G K R +LPNS IM
Sbjct: 70 MYINSPGGVVTSGLAIYDTMQFIRPAVSTLCTGQAASMGSLLLSAGHKDMRFSLPNSRIM 129
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
+HQPSGG+ GQA D+ +H ++I+ + LN +Y KHTGQS + I+ ++RD F+T E A+
Sbjct: 130 VHQPSGGFQGQATDIMLHAQEILNLKKRLNEIYVKHTGQSYKAIEDALERDKFLTAEAAQ 189
Query: 213 EFGIIDEVIDQRP 225
EFG+ID+VID+RP
Sbjct: 190 EFGLIDKVIDKRP 202
>gi|58616924|ref|YP_196123.1| ATP-dependent Clp protease proteolytic subunit [Ehrlichia
ruminantium str. Gardel]
gi|67460150|sp|Q5FFG7.1|CLPP_EHRRG RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|58416536|emb|CAI27649.1| ATP-dependent CLP protease proteolytic subunit [Ehrlichia
ruminantium str. Gardel]
Length = 198
Score = 266 bits (679), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 123/193 (63%), Positives = 156/193 (80%)
Query: 32 FSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPI 91
+L+PMV+E +SRGERAYDI++RLLKERII I GPI D A +VVAQL+FLE+ENP K I
Sbjct: 1 MTLVPMVVEPTSRGERAYDIYTRLLKERIIFITGPIEDQMASLVVAQLIFLEAENPEKDI 60
Query: 92 HMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTI 151
MY+NSPGG VTAGL+IYDTMQY++ I T+CLGQAASMGSLLLA+G KG R ALPNS I
Sbjct: 61 SMYINSPGGVVTAGLSIYDTMQYVKPRIATLCLGQAASMGSLLLAAGEKGMRCALPNSRI 120
Query: 152 MIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEA 211
MIHQPSGG+ GQA D+ IH K+I+ + LN +Y KHTG+ + + +M+RD FM+ + A
Sbjct: 121 MIHQPSGGFQGQATDIEIHAKEILNIKSRLNYIYVKHTGRELSEVVASMERDNFMSADSA 180
Query: 212 KEFGIIDEVIDQR 224
++FGIID+VI++R
Sbjct: 181 QDFGIIDKVIEKR 193
>gi|217979044|ref|YP_002363191.1| endopeptidase Clp [Methylocella silvestris BL2]
gi|217504420|gb|ACK51829.1| Endopeptidase Clp [Methylocella silvestris BL2]
Length = 215
Score = 266 bits (679), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 119/192 (61%), Positives = 155/192 (80%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
LIP VIE++SRGER +DI+SRLL+ERII + GP+ D A V++AQLLFLE+ENP K I M
Sbjct: 14 LIPQVIENTSRGERGFDIYSRLLRERIIFLTGPVEDHMASVIIAQLLFLEAENPKKEISM 73
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VTAGLAIYDTMQ+IR ++T+C+GQAASMGSLLL +G G+R ALPN+ IM+
Sbjct: 74 YINSPGGVVTAGLAIYDTMQFIRPKVSTLCVGQAASMGSLLLCAGEAGQRFALPNARIMV 133
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQPSGG+ GQA D+ H + I++V LN +Y KHTG+ + I+K +DRD+FM+ ++A+E
Sbjct: 134 HQPSGGFQGQASDILRHAEDIMKVKRRLNDIYVKHTGRDYDTIEKTLDRDHFMSSDDARE 193
Query: 214 FGIIDEVIDQRP 225
FGI+D VI QRP
Sbjct: 194 FGIVDSVISQRP 205
>gi|126741244|ref|ZP_01756923.1| Protease subunit of ATP-dependent Clp protease [Roseobacter sp.
SK209-2-6]
gi|126717649|gb|EBA14372.1| Protease subunit of ATP-dependent Clp protease [Roseobacter sp.
SK209-2-6]
Length = 210
Score = 266 bits (679), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 116/192 (60%), Positives = 158/192 (82%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E +SRGERAYDIFSRLLKERII +NGP++D + ++VAQLL LE+ENPSK I
Sbjct: 11 TLVPMVVEQTSRGERAYDIFSRLLKERIIFLNGPVHDGMSSLIVAQLLHLEAENPSKEIS 70
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
MY+NSPGG VT+GL+IYDTMQYI+ ++T+ +GQAASMGSLLL +G G R +LPNS +M
Sbjct: 71 MYINSPGGVVTSGLSIYDTMQYIKPKVSTLVIGQAASMGSLLLTAGEAGMRFSLPNSRVM 130
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
+HQPSGG+ GQA D+ IH ++ +++ LN +Y KHTGQ ++ ++ ++RD FM+PEEAK
Sbjct: 131 VHQPSGGFQGQATDIMIHAEETLKLKRRLNEIYVKHTGQELDKVEAALERDNFMSPEEAK 190
Query: 213 EFGIIDEVIDQR 224
EFG+IDE+++ R
Sbjct: 191 EFGLIDEIVENR 202
>gi|115634688|ref|XP_786892.2| PREDICTED: putative ATP-dependent Clp protease proteolytic subunit,
mitochondrial-like [Strongylocentrotus purpuratus]
Length = 239
Score = 266 bits (679), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 118/192 (61%), Positives = 155/192 (80%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
L+P+VIE + RGERAYDI+SRLLKERIIC+ GP+ND + VV+AQLLFL+SE+ KPIHM
Sbjct: 33 LVPIVIEQTGRGERAYDIYSRLLKERIICLMGPVNDTVSSVVIAQLLFLQSESNKKPIHM 92
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VTAGL IYD+MQY+ PI T C+GQA SMGSLLL +G G R +LPNS IM+
Sbjct: 93 YINSPGGSVTAGLGIYDSMQYVLPPIATWCVGQACSMGSLLLTAGAPGMRHSLPNSRIMV 152
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQPSG GQA D+ I ++I+++ +N LY KHTGQ+++VI++ M+RD+FM+P+EA +
Sbjct: 153 HQPSGQAVGQATDIQIQAEEIIKLKKQINKLYVKHTGQTLDVIEQAMERDHFMSPQEALQ 212
Query: 214 FGIIDEVIDQRP 225
FG+ID+V+D P
Sbjct: 213 FGLIDKVLDHPP 224
>gi|197105280|ref|YP_002130657.1| ATP-dependent Clp protease, proteolytic subunit [Phenylobacterium
zucineum HLK1]
gi|196478700|gb|ACG78228.1| ATP-dependent Clp protease, proteolytic subunit [Phenylobacterium
zucineum HLK1]
Length = 205
Score = 266 bits (679), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 118/194 (60%), Positives = 155/194 (79%)
Query: 31 SFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKP 90
+ L+PMV+E +SRGERAYDIFSRLLK+RI+ + GP+ D A ++ AQLL LE+ENP K
Sbjct: 8 ALGLVPMVVEQTSRGERAYDIFSRLLKDRIVFLAGPVEDGMASLICAQLLHLEAENPKKE 67
Query: 91 IHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNST 150
I MY+NSPGG VT+GLAIYDTMQYI+SP+ T+CLG AASMGS LL +G KG+R ALPNS
Sbjct: 68 IQMYINSPGGVVTSGLAIYDTMQYIKSPVITLCLGMAASMGSFLLMAGEKGQRIALPNSR 127
Query: 151 IMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEE 210
IM+HQPSGGYSG+A D+ H + I++ LN +Y KHTGQ IE +++ +DRD+FMT +E
Sbjct: 128 IMVHQPSGGYSGKATDIQRHAEDIIKTKRRLNEIYAKHTGQPIEAVEETLDRDFFMTAQE 187
Query: 211 AKEFGIIDEVIDQR 224
AK++G++D V ++R
Sbjct: 188 AKDWGLVDHVWEKR 201
>gi|402703462|ref|ZP_10851441.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia
helvetica C9P9]
Length = 201
Score = 266 bits (679), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 122/199 (61%), Positives = 158/199 (79%), Gaps = 1/199 (0%)
Query: 32 FSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPI 91
S +P+VIE +SRGERAYDI+SRLLKERII + + D A+++VAQLLFLE+ENP K I
Sbjct: 1 MSYVPIVIEQTSRGERAYDIYSRLLKERIIFVCSTVEDHMANLIVAQLLFLEAENPKKDI 60
Query: 92 HMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTI 151
+MY+NSPGG VTAGLAIYDTMQYI+ + T+C+GQA SMGSLLL G KG R +LP+S I
Sbjct: 61 YMYINSPGGVVTAGLAIYDTMQYIKPKVATLCIGQACSMGSLLLCGGEKGMRYSLPHSRI 120
Query: 152 MIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEA 211
MIHQPSGGY GQA D+ IH ++ +++ +N LY KHTGQ I+ ++K+M+RD FM+PEEA
Sbjct: 121 MIHQPSGGYKGQATDIEIHAQETLKIKKLINGLYSKHTGQDIQYVEKSMERDNFMSPEEA 180
Query: 212 KEFGIIDEVIDQR-PMALV 229
K+FG++D +I R MAL+
Sbjct: 181 KKFGLVDNIISSRDAMALL 199
>gi|256369536|ref|YP_003107046.1| ATP-dependent Clp protease proteolytic subunit [Brucella microti
CCM 4915]
gi|255999698|gb|ACU48097.1| ATP-dependent Clp protease proteolytic subunit [Brucella microti
CCM 4915]
Length = 209
Score = 266 bits (679), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 117/192 (60%), Positives = 156/192 (81%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E ++RGERAYDIFSRLLKERII +NGP+ D + +V AQLLFLE+ENP K I+
Sbjct: 10 NLVPMVVEQTNRGERAYDIFSRLLKERIIFVNGPVEDGMSMLVCAQLLFLEAENPKKEIN 69
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
MY+NSPGG VT+G+AIYDTMQ+IR P++T+C+GQAASMGSLLL +G G R ALPN+ IM
Sbjct: 70 MYINSPGGVVTSGMAIYDTMQFIRPPVSTLCMGQAASMGSLLLTAGATGHRYALPNARIM 129
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
+HQPSGG+ GQA D+ H + I+++ LN +Y KHTG+ + I+ +DRD+FMT +EA
Sbjct: 130 VHQPSGGFQGQASDIERHAQDIIKMKRRLNEIYVKHTGRDYDTIECTLDRDHFMTAQEAL 189
Query: 213 EFGIIDEVIDQR 224
EFG+ID+V++ R
Sbjct: 190 EFGLIDKVVEAR 201
>gi|190570982|ref|YP_001975340.1| ATP-dependent Clp protease proteolytic subunit [Wolbachia
endosymbiont of Culex quinquefasciatus Pel]
gi|213019499|ref|ZP_03335305.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Wolbachia
endosymbiont of Culex quinquefasciatus JHB]
gi|226706556|sp|B3CLB1.1|CLPP_WOLPP RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|190357254|emb|CAQ54678.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Wolbachia
endosymbiont of Culex quinquefasciatus Pel]
gi|212994921|gb|EEB55563.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Wolbachia
endosymbiont of Culex quinquefasciatus JHB]
Length = 208
Score = 266 bits (679), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 124/193 (64%), Positives = 156/193 (80%)
Query: 32 FSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPI 91
+LIP+V+E +SRGERAYDI+SRL+KERII + GPI D+ A V+VAQLLFLESENP K I
Sbjct: 1 MTLIPIVVEQTSRGERAYDIYSRLVKERIIFVTGPIEDNMASVIVAQLLFLESENPDKDI 60
Query: 92 HMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTI 151
MY+NSPGG VTAGL+IYDTMQYI ++T+C+GQAASMGSLLL +G +G+R +LP+S I
Sbjct: 61 CMYINSPGGVVTAGLSIYDTMQYINPDVSTLCIGQAASMGSLLLTAGAEGKRYSLPHSRI 120
Query: 152 MIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEA 211
MIHQPSGGY GQA D+ IH +I+RV LN +Y KHTG S++ I++ M+RD FM PEEA
Sbjct: 121 MIHQPSGGYHGQATDIEIHANEILRVKKKLNQIYEKHTGNSLKKIEEMMERDKFMDPEEA 180
Query: 212 KEFGIIDEVIDQR 224
+ G+ID VI +R
Sbjct: 181 MKTGLIDRVIAER 193
>gi|395850953|ref|XP_003798036.1| PREDICTED: putative ATP-dependent Clp protease proteolytic subunit,
mitochondrial [Otolemur garnettii]
Length = 277
Score = 266 bits (679), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 128/223 (57%), Positives = 166/223 (74%), Gaps = 2/223 (0%)
Query: 5 RNLLSRT--SMATKFLQLSKPSAQISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIIC 62
R L+ R M L L + A + LIP+V+E + RGERAYDI+SRLL+ERI+C
Sbjct: 27 RFLMQRPLQQMPKSSLALPRSLHATPAFALPLIPIVVEQTGRGERAYDIYSRLLRERIVC 86
Query: 63 INGPINDDTAHVVVAQLLFLESENPSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTI 122
+ GPI+D A +V+AQLLFL+SE+ KPIHMY+NSPGG VTAGLAIYDTMQYI +PI T
Sbjct: 87 VMGPIDDSVASLVIAQLLFLQSESNKKPIHMYINSPGGVVTAGLAIYDTMQYILNPICTW 146
Query: 123 CLGQAASMGSLLLASGTKGERRALPNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALN 182
C+GQAASMGSLLLA+G+ G R +LPNS IMIHQPSGG GQA D+ I ++I+++ L
Sbjct: 147 CVGQAASMGSLLLAAGSPGMRHSLPNSRIMIHQPSGGARGQATDIAIQAEEIMKLKKQLY 206
Query: 183 ALYCKHTGQSIEVIQKNMDRDYFMTPEEAKEFGIIDEVIDQRP 225
+Y KHT QS++VI+ M+RD +M+P EA+EFGI+D+V+ P
Sbjct: 207 NIYAKHTKQSLQVIESAMERDRYMSPMEAQEFGILDKVLVHPP 249
>gi|47216266|emb|CAG05962.1| unnamed protein product [Tetraodon nigroviridis]
Length = 249
Score = 265 bits (678), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 120/194 (61%), Positives = 158/194 (81%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
LIP+V+E + RGERAYDI+SRLL+ERIIC+ GPI+D A +++AQLLFL+SE+ +KPIHM
Sbjct: 30 LIPIVVEQTGRGERAYDIYSRLLRERIICVMGPIDDSVASLIIAQLLFLQSESNNKPIHM 89
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VTAGLAIYDTMQYI +PI+T C+GQAASMGSLLLA+GT G R +LPN+ +MI
Sbjct: 90 YINSPGGVVTAGLAIYDTMQYILNPISTWCVGQAASMGSLLLAAGTAGMRHSLPNARVMI 149
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQPSGG GQA D+ I ++I+++ +N +Y KHTGQ +E I+ M+RD +M+P EA++
Sbjct: 150 HQPSGGARGQATDIAIQAEEILKLKRQINTIYAKHTGQPLETIESIMERDRYMSPMEAQD 209
Query: 214 FGIIDEVIDQRPMA 227
FG+ID V+ P A
Sbjct: 210 FGLIDRVLVHPPQA 223
>gi|157825907|ref|YP_001493627.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia akari
str. Hartford]
gi|166214704|sp|A8GNZ4.1|CLPP_RICAH RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|157799865|gb|ABV75119.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia akari
str. Hartford]
Length = 201
Score = 265 bits (678), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 121/193 (62%), Positives = 155/193 (80%)
Query: 32 FSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPI 91
S +P+VIE +SRGERAYDI+SRLLKERII + + D A+++VAQLLFLE+ENP K +
Sbjct: 1 MSYVPIVIEQTSRGERAYDIYSRLLKERIIFVCSTVEDHMANLIVAQLLFLEAENPKKDV 60
Query: 92 HMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTI 151
+MY+NSPGG VTAGLAIYDTMQYI+ + T+C+GQA SMGSLLL GT+G R +LP+S I
Sbjct: 61 YMYINSPGGVVTAGLAIYDTMQYIKPKVATLCIGQACSMGSLLLCGGTQGMRYSLPHSRI 120
Query: 152 MIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEA 211
MIHQPSGGY GQA D+ IH ++ +++ LN LY KHTGQ ++ I+K+M+RD FM+PEEA
Sbjct: 121 MIHQPSGGYKGQATDIEIHAQETLKIKRLLNELYSKHTGQELKHIEKSMERDNFMSPEEA 180
Query: 212 KEFGIIDEVIDQR 224
K+FGIID +I R
Sbjct: 181 KKFGIIDNIISSR 193
>gi|67459164|ref|YP_246788.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia felis
URRWXCal2]
gi|75536404|sp|Q4ULF0.1|CLPP_RICFE RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|67004697|gb|AAY61623.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia felis
URRWXCal2]
Length = 201
Score = 265 bits (678), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 123/193 (63%), Positives = 154/193 (79%)
Query: 32 FSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPI 91
S +P+VIE +SRGERAYDI+SRLLKERII + + D A++VVAQLLFLE+ENP K I
Sbjct: 1 MSYVPIVIEQTSRGERAYDIYSRLLKERIIFVCSTVEDHMANLVVAQLLFLEAENPKKDI 60
Query: 92 HMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTI 151
+MY+NSPGG VTAGLAIYDTMQYI+ + T+C+GQA SMGSLLL G KG R +LP+S I
Sbjct: 61 YMYINSPGGVVTAGLAIYDTMQYIKPKVATLCIGQACSMGSLLLCGGEKGMRYSLPHSRI 120
Query: 152 MIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEA 211
MIHQPSGGY GQA D+ IH ++ +++ LN LY KHTGQ ++ I+K+M+RD FM+PEEA
Sbjct: 121 MIHQPSGGYRGQATDIEIHAQETLKIKRLLNELYSKHTGQELKHIEKSMERDNFMSPEEA 180
Query: 212 KEFGIIDEVIDQR 224
K+FGIID +I R
Sbjct: 181 KKFGIIDNIISSR 193
>gi|83943111|ref|ZP_00955571.1| Protease subunit of ATP-dependent Clp protease [Sulfitobacter sp.
EE-36]
gi|83846119|gb|EAP83996.1| Protease subunit of ATP-dependent Clp protease [Sulfitobacter sp.
EE-36]
Length = 211
Score = 265 bits (678), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 122/209 (58%), Positives = 164/209 (78%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E +SRGERAYDIFSRLLKERII +NGP++D + ++VAQLL LE+ENPSK I
Sbjct: 3 TLVPMVVEQTSRGERAYDIFSRLLKERIIFLNGPVHDGMSSLIVAQLLHLEAENPSKEIS 62
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
MY+NSPGG VT+GL+IYDTMQYI+ ++T+ +GQAASMGSLLL +G KG R +LPNS +M
Sbjct: 63 MYINSPGGVVTSGLSIYDTMQYIKPKVSTLVIGQAASMGSLLLQAGEKGMRFSLPNSRVM 122
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
+HQPSGGY GQA D+ IH ++ ++ LN +Y KHTGQ +E ++ ++RD FM+PEEAK
Sbjct: 123 VHQPSGGYQGQATDIMIHAQETQKLKTRLNEIYVKHTGQPLEKVEAALERDNFMSPEEAK 182
Query: 213 EFGIIDEVIDQRPMALVTDAVGREGKEGK 241
++G+IDE+++ R DA K+GK
Sbjct: 183 DWGLIDEIVENRGKMDDPDAPKDGDKKGK 211
>gi|114327971|ref|YP_745128.1| ATP-dependent endopeptidase Clp proteolytic subunit clpP
[Granulibacter bethesdensis CGDNIH1]
gi|114316145|gb|ABI62205.1| ATP-dependent endopeptidase clp proteolytic subunit clpP
[Granulibacter bethesdensis CGDNIH1]
Length = 248
Score = 265 bits (678), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 115/206 (55%), Positives = 164/206 (79%)
Query: 27 ISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESEN 86
+ S +L+PMV+E ++RGER++DI+SRLLKERII + G + D + ++ AQLLFLESEN
Sbjct: 40 VEVYSNTLVPMVVEQTARGERSFDIYSRLLKERIIFLTGAVYDQVSALICAQLLFLESEN 99
Query: 87 PSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRAL 146
P K I Y+NSPGG V+AGLAIYDTMQYIRSP++T+C+GQAASMGSLLL +G K +R AL
Sbjct: 100 PQKEISFYINSPGGVVSAGLAIYDTMQYIRSPVSTVCIGQAASMGSLLLCAGEKDKRFAL 159
Query: 147 PNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFM 206
PN+ +M+HQPSGG GQA D+ I ++I+ + LN +Y +HTGQSIE I++ ++RD +M
Sbjct: 160 PNARVMVHQPSGGAQGQATDIEIQAREILTLRKRLNEIYNRHTGQSIEAIERKLERDTYM 219
Query: 207 TPEEAKEFGIIDEVIDQRPMALVTDA 232
+ EEA++FG++D+V+++RP++ D+
Sbjct: 220 SAEEARDFGLVDQVVERRPVSSTPDS 245
>gi|148255923|ref|YP_001240508.1| ATP-dependent Clp protease proteolytic subunit ClpP [Bradyrhizobium
sp. BTAi1]
gi|166201801|sp|A5EKA8.1|CLPP_BRASB RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|146408096|gb|ABQ36602.1| ATP-dependent Clp protease proteolytic subunit ClpP [Bradyrhizobium
sp. BTAi1]
Length = 210
Score = 265 bits (678), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 120/193 (62%), Positives = 155/193 (80%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E ++RGERAYDIFSRLLKERII + GP+ D A ++VAQLLFLE+ENP K I
Sbjct: 10 NLVPMVVEQTNRGERAYDIFSRLLKERIIFVTGPVEDGMATLIVAQLLFLEAENPKKEIA 69
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
MY+NSPGG VT+GLAIYDTMQ+IR ++T+C GQAASMGSLLL +G K R +LPNS IM
Sbjct: 70 MYINSPGGVVTSGLAIYDTMQFIRPAVSTLCTGQAASMGSLLLCAGHKDMRFSLPNSRIM 129
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
+HQPSGG+ GQA D+ +H ++I+ + LN +Y KHTGQS + I+ ++RD F+T E A
Sbjct: 130 VHQPSGGFQGQATDIMLHAQEILSLKKRLNEIYVKHTGQSYKAIEDALERDKFLTAEAAA 189
Query: 213 EFGIIDEVIDQRP 225
EFG+ID+VID+RP
Sbjct: 190 EFGLIDKVIDKRP 202
>gi|350564171|ref|ZP_08932990.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thioalkalimicrobium aerophilum AL3]
gi|349778171|gb|EGZ32530.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thioalkalimicrobium aerophilum AL3]
Length = 201
Score = 265 bits (678), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 116/192 (60%), Positives = 159/192 (82%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E +SRGERA+DI+SRLLKER+I + GP+ D A+++VAQ+LFLESENP K IH
Sbjct: 9 ALVPMVVEQTSRGERAFDIYSRLLKERVIFLVGPVEDHMANLIVAQMLFLESENPEKDIH 68
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
+Y+NSPGG VTAG+AIYDTM++I+ ++T+CLGQAASMGS LLA+G KG+R ALPNS +M
Sbjct: 69 LYINSPGGSVTAGMAIYDTMRFIKPDVSTMCLGQAASMGSFLLAAGAKGKRFALPNSRVM 128
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQP GG+ GQA D IH ++I+ + D LN ++TGQ +EVI+++ DRD FM+ E+AK
Sbjct: 129 IHQPLGGFQGQASDFEIHAREILFIKDKLNKALSENTGQPLEVIERDTDRDNFMSAEKAK 188
Query: 213 EFGIIDEVIDQR 224
E+G+ID+V+ +R
Sbjct: 189 EYGLIDQVLAKR 200
>gi|110680063|ref|YP_683070.1| ATP-dependent Clp protease proteolytic subunit [Roseobacter
denitrificans OCh 114]
gi|116243162|sp|Q165F9.1|CLPP_ROSDO RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|109456179|gb|ABG32384.1| Clp protease, putative [Roseobacter denitrificans OCh 114]
Length = 208
Score = 265 bits (678), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 117/193 (60%), Positives = 157/193 (81%)
Query: 32 FSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPI 91
+L+PMV+E +SRGERAYDIFSRLLKERII +NGP++D + ++VAQLL LE+ENP+K I
Sbjct: 9 MNLVPMVVEQTSRGERAYDIFSRLLKERIIFLNGPVHDGMSSLIVAQLLHLEAENPAKEI 68
Query: 92 HMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTI 151
MY+NSPGG VT+GL+IYDTMQYI+ ++T+ +GQAASMGSLLL +G G R +LPNS +
Sbjct: 69 SMYINSPGGVVTSGLSIYDTMQYIKPKVSTLVIGQAASMGSLLLTAGEAGMRFSLPNSRV 128
Query: 152 MIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEA 211
M+HQPSGGY GQA D+ IH + ++ D LN +Y KHTGQ+++ + ++RD FM+PEEA
Sbjct: 129 MVHQPSGGYQGQATDIMIHAAETQKLKDRLNEIYVKHTGQTMKKVVDALERDNFMSPEEA 188
Query: 212 KEFGIIDEVIDQR 224
KEFG+IDE+++ R
Sbjct: 189 KEFGLIDEIVENR 201
>gi|91787906|ref|YP_548858.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Polaromonas
sp. JS666]
gi|91697131|gb|ABE43960.1| ATP-dependent Clp protease proteolytic subunit ClpP [Polaromonas
sp. JS666]
Length = 218
Score = 265 bits (677), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 117/197 (59%), Positives = 158/197 (80%)
Query: 29 ARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPS 88
A+ ++PMVIE S RGER+YDI+SRLLKER+I + GP+ND TA++VVAQLLFLESENP
Sbjct: 22 AQGLGMVPMVIEQSGRGERSYDIYSRLLKERVIFLVGPVNDQTANLVVAQLLFLESENPD 81
Query: 89 KPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPN 148
K I Y+NSPGG VTAG+AIYDTMQ+I+ ++T+C+G AASMG+ LL++G KG+R +LPN
Sbjct: 82 KDISFYINSPGGSVTAGMAIYDTMQFIKPDVSTLCVGMAASMGAFLLSAGAKGKRFSLPN 141
Query: 149 STIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTP 208
S +MIHQPSGG GQA D+ IH + I++ D LN + +TGQ IE I+++ +RDYF+
Sbjct: 142 SRVMIHQPSGGAQGQATDIEIHARDILKTRDQLNRILAANTGQPIEKIERDTERDYFLFA 201
Query: 209 EEAKEFGIIDEVIDQRP 225
E+AKE+G++D+VI +RP
Sbjct: 202 EDAKEYGLVDQVISRRP 218
>gi|163851839|ref|YP_001639882.1| ATP-dependent Clp protease proteolytic subunit [Methylobacterium
extorquens PA1]
gi|218530631|ref|YP_002421447.1| ATP-dependent Clp protease proteolytic subunit [Methylobacterium
extorquens CM4]
gi|240139003|ref|YP_002963478.1| ATP-dependent Clp protease proteolytic subunit [Methylobacterium
extorquens AM1]
gi|254561598|ref|YP_003068693.1| ATP-dependent Clp protease proteolytic subunit [Methylobacterium
extorquens DM4]
gi|418060066|ref|ZP_12697994.1| ATP-dependent Clp protease proteolytic subunit [Methylobacterium
extorquens DSM 13060]
gi|226706461|sp|A9W5F5.1|CLPP_METEP RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|254763796|sp|B7KNT0.1|CLPP_METC4 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|163663444|gb|ABY30811.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Methylobacterium extorquens PA1]
gi|218522934|gb|ACK83519.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Methylobacterium extorquens CM4]
gi|240008975|gb|ACS40201.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Methylobacterium extorquens AM1]
gi|254268876|emb|CAX24837.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Methylobacterium extorquens DM4]
gi|373566384|gb|EHP92385.1| ATP-dependent Clp protease proteolytic subunit [Methylobacterium
extorquens DSM 13060]
Length = 208
Score = 265 bits (677), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 118/193 (61%), Positives = 154/193 (79%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
SL+PMV+E SSRGERA+DI+SRLL+ERII + GP+ D A ++VAQLLFLE+ENP K I
Sbjct: 11 SLVPMVVEQSSRGERAFDIYSRLLRERIIFLTGPVEDQGASLIVAQLLFLEAENPKKEIS 70
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
Y+NSPGG VT+GL+IYDTMQ+IR P+ T+C+GQAASMGSLLLA+G G R ALPN+ IM
Sbjct: 71 FYINSPGGVVTSGLSIYDTMQFIRCPVTTLCVGQAASMGSLLLAAGEAGHRFALPNARIM 130
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
+HQPSGG+ GQA D+ IH ++I + LN +Y KHTG+ E I + ++RD FMT + AK
Sbjct: 131 VHQPSGGFQGQATDILIHAREIEALKKRLNEIYVKHTGREYETIHQALERDNFMTADAAK 190
Query: 213 EFGIIDEVIDQRP 225
EFG+ID+++ +RP
Sbjct: 191 EFGLIDDILHKRP 203
>gi|359407410|ref|ZP_09199887.1| ATP-dependent Clp protease, proteolytic subunit ClpP [SAR116
cluster alpha proteobacterium HIMB100]
gi|356677449|gb|EHI49793.1| ATP-dependent Clp protease, proteolytic subunit ClpP [SAR116
cluster alpha proteobacterium HIMB100]
Length = 215
Score = 265 bits (677), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 120/193 (62%), Positives = 156/193 (80%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMVIE + RGER++DIFSRLLKERII +NGP+ D A +V AQLLFLE+ENPSK I
Sbjct: 15 NLVPMVIEQTGRGERSFDIFSRLLKERIIFLNGPVEDVMASLVCAQLLFLEAENPSKDIF 74
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
MY+NSPGG VT+GLAIYDTMQYI+ + T+C+GQAASMGSLLL +G G+R +LP++ IM
Sbjct: 75 MYINSPGGVVTSGLAIYDTMQYIKPDVATVCMGQAASMGSLLLTAGAAGKRYSLPHARIM 134
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
HQPSGG+ GQA D+ IH K+I+ + LN +Y H+G++++ I+K MDRD FM+P EAK
Sbjct: 135 THQPSGGFQGQATDIEIHAKEIINLRGRLNKIYETHSGKTVKQIEKIMDRDTFMSPYEAK 194
Query: 213 EFGIIDEVIDQRP 225
E G+IDEV+ +RP
Sbjct: 195 EMGLIDEVVSKRP 207
>gi|339503121|ref|YP_004690541.1| ATP-dependent Clp protease proteolytic subunit ClpP [Roseobacter
litoralis Och 149]
gi|338757114|gb|AEI93578.1| ATP-dependent Clp protease proteolytic subunit ClpP [Roseobacter
litoralis Och 149]
Length = 208
Score = 265 bits (677), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 116/193 (60%), Positives = 158/193 (81%)
Query: 32 FSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPI 91
+L+PMV+E +SRGERAYDIFSRLLKERII +NGP++D + ++VAQLL LE++NP+K I
Sbjct: 9 MNLVPMVVEQTSRGERAYDIFSRLLKERIIFLNGPVHDGMSSLIVAQLLHLEADNPAKEI 68
Query: 92 HMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTI 151
MY+NSPGG VT+GL+IYDTMQYI+ ++T+ +GQAASMGSLLL +G G R +LPNS I
Sbjct: 69 SMYINSPGGVVTSGLSIYDTMQYIKPKVSTLVIGQAASMGSLLLTAGEAGMRFSLPNSRI 128
Query: 152 MIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEA 211
M+HQPSGGY GQA D+ IH + ++ D LN +Y KHTGQ+++ ++ ++RD FM+PEEA
Sbjct: 129 MVHQPSGGYQGQATDIMIHAAETQKLKDRLNEIYVKHTGQTLKKVENALERDNFMSPEEA 188
Query: 212 KEFGIIDEVIDQR 224
K+FG+IDE+++ R
Sbjct: 189 KDFGLIDEIVENR 201
>gi|149916365|ref|ZP_01904885.1| phosphoglycerate kinase [Roseobacter sp. AzwK-3b]
gi|149809819|gb|EDM69671.1| phosphoglycerate kinase [Roseobacter sp. AzwK-3b]
Length = 210
Score = 265 bits (677), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 116/192 (60%), Positives = 159/192 (82%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E +SRGERAYDIFSRLLKERII +NGP++D + ++VAQLL LE+ENP+K I
Sbjct: 11 TLVPMVVEQTSRGERAYDIFSRLLKERIIFVNGPVHDGMSSLIVAQLLHLEAENPAKEIS 70
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
MY+NSPGG VT+GL+IYDTMQYI+ ++T+ +GQAASMGSLLL +G KG R +LPNS IM
Sbjct: 71 MYINSPGGVVTSGLSIYDTMQYIKPKVSTLVIGQAASMGSLLLTAGEKGMRFSLPNSRIM 130
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
+HQPSGGY GQA D+ IH ++ +++ LN +Y KHTGQ+++ ++ ++RD FM+PEEAK
Sbjct: 131 VHQPSGGYQGQATDIMIHAEETLKLKKRLNQIYVKHTGQTLKKVEDALERDNFMSPEEAK 190
Query: 213 EFGIIDEVIDQR 224
+G+IDE+++ R
Sbjct: 191 NWGLIDEIVESR 202
>gi|414173794|ref|ZP_11428421.1| ATP-dependent Clp protease proteolytic subunit [Afipia broomeae
ATCC 49717]
gi|410890428|gb|EKS38227.1| ATP-dependent Clp protease proteolytic subunit [Afipia broomeae
ATCC 49717]
Length = 210
Score = 265 bits (677), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 119/192 (61%), Positives = 156/192 (81%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E ++RGERAYDIFSRLLKERII + GP+ D + +VVAQLLFLE+ENP K I
Sbjct: 10 NLVPMVVEQTNRGERAYDIFSRLLKERIIFVTGPVEDGMSVLVVAQLLFLEAENPKKEIS 69
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
MY+NSPGG VT+GLAIYDTMQ+IR P++T+C GQAASMGSLLLA+G K R +LPNS IM
Sbjct: 70 MYINSPGGVVTSGLAIYDTMQFIRPPVSTLCTGQAASMGSLLLAAGHKDMRFSLPNSRIM 129
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
+HQPSGG+ GQA D+ +H ++I+ + LN +Y KHTGQ + I+ ++RD F+T E AK
Sbjct: 130 VHQPSGGFQGQATDIMLHAQEILNLKKRLNEIYVKHTGQPYKAIEDALERDKFLTAEMAK 189
Query: 213 EFGIIDEVIDQR 224
+FG++D+VID+R
Sbjct: 190 DFGLVDKVIDKR 201
>gi|157124223|ref|XP_001660372.1| endopeptidase clp, putative [Aedes aegypti]
gi|108882807|gb|EAT47032.1| AAEL001797-PA [Aedes aegypti]
Length = 225
Score = 265 bits (677), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 119/196 (60%), Positives = 154/196 (78%)
Query: 30 RSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSK 89
R +L+P+V+E + RGERAYDIFSRLLKERIIC+ GPI+DD + ++VAQLLFL+SEN +K
Sbjct: 23 RLLNLVPIVVEQTGRGERAYDIFSRLLKERIICLMGPIHDDLSSLIVAQLLFLQSENGTK 82
Query: 90 PIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNS 149
PIHMY+NSPGG VTAGLAIYDTMQY++ P+ T C+GQA SMGSLLLA+G G R +LPN+
Sbjct: 83 PIHMYINSPGGSVTAGLAIYDTMQYVKPPVATWCVGQACSMGSLLLAAGAPGMRHSLPNA 142
Query: 150 TIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPE 209
IMIHQPSGG GQA D+ I ++I+++ L +Y KHT S++V+ M+RD F+ PE
Sbjct: 143 RIMIHQPSGGAQGQATDIQIQAEEILKLKKQLTEIYGKHTKTSVDVLYSKMERDTFLNPE 202
Query: 210 EAKEFGIIDEVIDQRP 225
EA+ GIID V++ P
Sbjct: 203 EAQALGIIDTVLEHPP 218
>gi|359785395|ref|ZP_09288547.1| ATP-dependent Clp protease proteolytic subunit [Halomonas sp.
GFAJ-1]
gi|359297324|gb|EHK61560.1| ATP-dependent Clp protease proteolytic subunit [Halomonas sp.
GFAJ-1]
Length = 205
Score = 265 bits (677), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 116/192 (60%), Positives = 155/192 (80%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
L+PMV+E S++GERAYDI+SRLLKER+I + GP+ D A++VVAQLLFLESENP K IH+
Sbjct: 12 LVPMVVEQSAKGERAYDIYSRLLKERVIFLVGPVEDYMANLVVAQLLFLESENPDKDIHL 71
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VTAG++IYDTMQ+I+ ++T+C+GQAASMG+LLL +G G+R LPNS +MI
Sbjct: 72 YINSPGGSVTAGMSIYDTMQFIKPDVSTVCIGQAASMGALLLTAGAAGKRYCLPNSRVMI 131
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQP GGY GQA D+ IHT++I+ + + LN + HTGQ IE + + DRD FM+ +AKE
Sbjct: 132 HQPLGGYQGQASDIEIHTREILGIREKLNQILAHHTGQDIETVASDTDRDNFMSAHKAKE 191
Query: 214 FGIIDEVIDQRP 225
+G+ID V+D+RP
Sbjct: 192 YGLIDAVLDKRP 203
>gi|444911057|ref|ZP_21231233.1| ATP-dependent Clp protease proteolytic subunit [Cystobacter fuscus
DSM 2262]
gi|444718395|gb|ELW59208.1| ATP-dependent Clp protease proteolytic subunit [Cystobacter fuscus
DSM 2262]
Length = 201
Score = 265 bits (677), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 117/190 (61%), Positives = 158/190 (83%)
Query: 35 IPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHMY 94
IP+VIE + RGERAYD++SRLLK+RI+ + P+NDD A+++VAQLLFLESE+P K I +Y
Sbjct: 3 IPLVIETTHRGERAYDLYSRLLKDRIVMLGTPVNDDVANIIVAQLLFLESEDPDKGISLY 62
Query: 95 LNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMIH 154
+NSPGG VTAGLAIYDTMQY++ P++TIC+GQAASMG+LLL +G+ G+R ALPNS IMIH
Sbjct: 63 INSPGGSVTAGLAIYDTMQYVKCPVSTICIGQAASMGALLLLAGSPGKRYALPNSRIMIH 122
Query: 155 QPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKEF 214
QP GG GQA D+ I K+I+R+ +N L+ KHTG +IE I+K+ +RDYFM+ EEA+++
Sbjct: 123 QPLGGAQGQASDIDIQAKEILRLRSYINGLFVKHTGHNIERIEKDTERDYFMSAEEARQY 182
Query: 215 GIIDEVIDQR 224
G+IDEV+ ++
Sbjct: 183 GLIDEVVSKQ 192
>gi|332981496|ref|YP_004462937.1| ATP-dependent Clp protease proteolytic subunit ClpP [Mahella
australiensis 50-1 BON]
gi|332699174|gb|AEE96115.1| ATP-dependent Clp protease proteolytic subunit ClpP [Mahella
australiensis 50-1 BON]
Length = 194
Score = 265 bits (677), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 120/192 (62%), Positives = 156/192 (81%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+P+V+E SSRGER+YDI+SRLLKERI+ ++G ++D TA +VVAQ+LFLESE+P K IH
Sbjct: 2 NLVPIVVEQSSRGERSYDIYSRLLKERIVFLDGEVDDATASLVVAQMLFLESEDPDKDIH 61
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
+Y+NSPGG VTAG AIYDTMQYI+ ++TIC+G AASMG+ LLA+G KG+R ALPNS I+
Sbjct: 62 LYINSPGGSVTAGFAIYDTMQYIKPDVSTICIGMAASMGAFLLAAGAKGKRYALPNSEIL 121
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQP GG GQA D+ IH +QIVR+ LN + + TGQ E I+K+ DRD+FM+ +EAK
Sbjct: 122 IHQPMGGARGQATDIMIHAEQIVRIKRRLNEILSERTGQPYEKIEKDTDRDFFMSAQEAK 181
Query: 213 EFGIIDEVIDQR 224
E+GI+DEVI R
Sbjct: 182 EYGIVDEVIISR 193
>gi|359396721|ref|ZP_09189772.1| ATP-dependent Clp protease proteolytic subunit [Halomonas
boliviensis LC1]
gi|357969399|gb|EHJ91847.1| ATP-dependent Clp protease proteolytic subunit [Halomonas
boliviensis LC1]
Length = 205
Score = 265 bits (677), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 115/192 (59%), Positives = 155/192 (80%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
L+PMV+E S++GERAYDI+SRLLKER+I + GP+ D A++VVAQLLFLESENP K IH+
Sbjct: 12 LVPMVVEQSAKGERAYDIYSRLLKERVIFLVGPVEDYMANLVVAQLLFLESENPDKDIHL 71
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VTAG++IYDTMQ+++ ++T+C+GQAASMG+LLL +G G+R LPNS +MI
Sbjct: 72 YINSPGGSVTAGMSIYDTMQFVKPDVSTVCIGQAASMGALLLTAGAAGKRYCLPNSRVMI 131
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQP GGY GQA D+ IHT++I+ + + LN + HTGQ IE + ++ DRD FM+ AKE
Sbjct: 132 HQPLGGYQGQASDIEIHTREILGIREKLNQILAHHTGQDIEAVSRDTDRDNFMSANTAKE 191
Query: 214 FGIIDEVIDQRP 225
+G+ID V+D+RP
Sbjct: 192 YGLIDAVLDKRP 203
>gi|83954269|ref|ZP_00962989.1| Protease subunit of ATP-dependent Clp protease [Sulfitobacter sp.
NAS-14.1]
gi|83841306|gb|EAP80476.1| Protease subunit of ATP-dependent Clp protease [Sulfitobacter sp.
NAS-14.1]
Length = 219
Score = 265 bits (677), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 122/209 (58%), Positives = 164/209 (78%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E +SRGERAYDIFSRLLKERII +NGP++D + ++VAQLL LE+ENPSK I
Sbjct: 11 TLVPMVVEQTSRGERAYDIFSRLLKERIIFLNGPVHDGMSSLIVAQLLHLEAENPSKEIS 70
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
MY+NSPGG VT+GL+IYDTMQYI+ ++T+ +GQAASMGSLLL +G KG R +LPNS +M
Sbjct: 71 MYINSPGGVVTSGLSIYDTMQYIKPKVSTLVIGQAASMGSLLLQAGEKGMRFSLPNSRVM 130
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
+HQPSGGY GQA D+ IH ++ ++ LN +Y KHTGQ +E ++ ++RD FM+PEEAK
Sbjct: 131 VHQPSGGYQGQATDIMIHAQETQKLKTRLNEIYVKHTGQPLEKVEAALERDNFMSPEEAK 190
Query: 213 EFGIIDEVIDQRPMALVTDAVGREGKEGK 241
++G+IDE+++ R DA K+GK
Sbjct: 191 DWGLIDEIVENRGKMDDPDAPKDGDKKGK 219
>gi|340383776|ref|XP_003390392.1| PREDICTED: trigger factor-like [Amphimedon queenslandica]
Length = 661
Score = 265 bits (677), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 119/197 (60%), Positives = 161/197 (81%)
Query: 30 RSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSK 89
R+ +L+PMVIEHS+RGERA+DI+SRLLKER++ + G I+D ++V+VAQLLFLESENP K
Sbjct: 457 RALNLVPMVIEHSARGERAFDIYSRLLKERVVFLCGGIDDLVSNVIVAQLLFLESENPDK 516
Query: 90 PIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNS 149
IH+Y+NSPGG VTAGLAIYDTMQ+I+ ++T+C+GQAASMGSLLLA G G+R LP+S
Sbjct: 517 DIHLYINSPGGHVTAGLAIYDTMQFIKPAVSTMCIGQAASMGSLLLAGGAPGKRYCLPHS 576
Query: 150 TIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPE 209
+MIHQP GG+ GQA D+ IH ++I+R + L+ + HTGQSIE I+++ DRD FM
Sbjct: 577 CMMIHQPLGGFQGQASDIDIHAREILRTRERLDNILSIHTGQSIERIREDTDRDRFMHAA 636
Query: 210 EAKEFGIIDEVIDQRPM 226
EAKE+G+ID+V+++R +
Sbjct: 637 EAKEYGLIDDVLERREL 653
>gi|188581623|ref|YP_001925068.1| ATP-dependent Clp protease proteolytic subunit [Methylobacterium
populi BJ001]
gi|226706462|sp|B1Z9C7.1|CLPP_METPB RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|179345121|gb|ACB80533.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Methylobacterium populi BJ001]
Length = 208
Score = 265 bits (677), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 118/193 (61%), Positives = 154/193 (79%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
SL+PMV+E SSRGERA+DI+SRLL+ERII + GP+ D A ++VAQLLFLE+ENP K I
Sbjct: 11 SLVPMVVEQSSRGERAFDIYSRLLRERIIFLTGPVEDQGASLIVAQLLFLEAENPKKEIS 70
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
Y+NSPGG VT+GL+IYDTMQ+IR P+ T+C+GQAASMGSLLLA+G G R ALPN+ IM
Sbjct: 71 FYINSPGGVVTSGLSIYDTMQFIRCPVTTLCVGQAASMGSLLLAAGEAGHRFALPNARIM 130
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
+HQPSGG+ GQA D+ IH ++I + LN +Y KHTG+ E I + ++RD FMT + AK
Sbjct: 131 VHQPSGGFQGQATDILIHAREIEALKKRLNEIYVKHTGRDYETIHQALERDNFMTADAAK 190
Query: 213 EFGIIDEVIDQRP 225
EFG+ID+++ +RP
Sbjct: 191 EFGLIDDILHKRP 203
>gi|377555720|ref|ZP_09785448.1| ATP-dependent Clp protease proteolytic subunit [endosymbiont of
Bathymodiolus sp.]
Length = 197
Score = 265 bits (677), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 119/190 (62%), Positives = 157/190 (82%)
Query: 35 IPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHMY 94
IPMVIE S+RGERAYDI+SRLLKER+I + GP+ D A+V+VAQ+LFLESENP K IH+Y
Sbjct: 8 IPMVIEQSARGERAYDIYSRLLKERVIFMVGPVEDYMANVIVAQMLFLESENPDKDIHLY 67
Query: 95 LNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMIH 154
+NSPGG V+AGLAIYDTMQ+I+ ++T+C+GQAASMG+LLL +G K +R ALPN+ MIH
Sbjct: 68 INSPGGSVSAGLAIYDTMQFIKPDVSTLCIGQAASMGALLLTAGAKDKRYALPNARCMIH 127
Query: 155 QPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKEF 214
QP GG+SGQA D+ IH ++I++V + LN + HTGQSI+ IQK+ DRD FM+ +EA ++
Sbjct: 128 QPLGGFSGQASDIDIHAQEILKVREKLNTILKSHTGQSIKTIQKDTDRDNFMSADEAAKY 187
Query: 215 GIIDEVIDQR 224
G+ID+V+ QR
Sbjct: 188 GLIDKVLKQR 197
>gi|92117752|ref|YP_577481.1| endopeptidase Clp [Nitrobacter hamburgensis X14]
gi|116243151|sp|Q1QL76.1|CLPP_NITHX RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|91800646|gb|ABE63021.1| ATP-dependent Clp protease proteolytic subunit ClpP [Nitrobacter
hamburgensis X14]
Length = 211
Score = 265 bits (676), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 116/192 (60%), Positives = 157/192 (81%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E ++RGERAYDIFSRLLKERII + GP+ D+ + +VVAQLLFLE++NP K I
Sbjct: 10 NLVPMVVEQTNRGERAYDIFSRLLKERIIFVTGPVEDNMSMLVVAQLLFLEADNPKKEIS 69
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
MY+NSPGG VT+GLAIYDTMQ+IR P+ T+C GQAASMGSLLLA+G K R ALPN+ IM
Sbjct: 70 MYINSPGGVVTSGLAIYDTMQFIRPPVATLCTGQAASMGSLLLAAGEKDMRHALPNARIM 129
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
+HQPSGG+ GQA D+ +H ++I+ + LN +Y KHTGQ+ + I+ ++RD F+T + A+
Sbjct: 130 VHQPSGGFQGQATDIMLHAQEILNLKKRLNEIYVKHTGQTYKAIEDALERDKFLTADMAR 189
Query: 213 EFGIIDEVIDQR 224
+FG++D+VID+R
Sbjct: 190 DFGLVDKVIDKR 201
>gi|338532521|ref|YP_004665855.1| ATP-dependent Clp protease proteolytic subunit [Myxococcus fulvus
HW-1]
gi|337258617|gb|AEI64777.1| ATP-dependent Clp protease proteolytic subunit [Myxococcus fulvus
HW-1]
Length = 203
Score = 265 bits (676), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 120/194 (61%), Positives = 160/194 (82%), Gaps = 1/194 (0%)
Query: 35 IPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHMY 94
+P VIE + RGERAYD++SRLLK+RII + P+NDD A+++VAQLLFLESE+P K I++Y
Sbjct: 3 VPFVIETTHRGERAYDLYSRLLKDRIIMLGTPVNDDVANIIVAQLLFLESEDPDKGINLY 62
Query: 95 LNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMIH 154
+NSPGG VTAGLAIYDTMQY++ P++TIC+GQAASMG+LLL +G KG+R ALPNS IMIH
Sbjct: 63 INSPGGSVTAGLAIYDTMQYVKCPVSTICVGQAASMGALLLLAGAKGKRYALPNSRIMIH 122
Query: 155 QPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKEF 214
QP GG GQA D+ I K+I+R+ +N L KHTG +IE I+K+ +RDYFM+ E+A+++
Sbjct: 123 QPLGGAQGQATDIDIQAKEILRLRSYINGLIVKHTGHTIERIEKDTERDYFMSAEDARQY 182
Query: 215 GIIDEVID-QRPMA 227
G+IDEV++ QR +A
Sbjct: 183 GLIDEVVEKQRAIA 196
>gi|295689638|ref|YP_003593331.1| endopeptidase Clp [Caulobacter segnis ATCC 21756]
gi|295431541|gb|ADG10713.1| Endopeptidase Clp [Caulobacter segnis ATCC 21756]
Length = 210
Score = 265 bits (676), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 117/197 (59%), Positives = 156/197 (79%)
Query: 31 SFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKP 90
+ +L+PMV+E +SRGERA+DIFSRLLKERII + GP+ D A ++ AQLLFLESENP K
Sbjct: 9 AMNLVPMVVEQTSRGERAFDIFSRLLKERIIFLTGPVEDGMASLICAQLLFLESENPKKE 68
Query: 91 IHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNST 150
I MY+NSPGG VTAGLAIYDTMQYI+SP++T+C+G AASMGSLLLA+G G+R +LPN+
Sbjct: 69 IAMYINSPGGVVTAGLAIYDTMQYIKSPVSTVCMGMAASMGSLLLAAGAAGQRISLPNAR 128
Query: 151 IMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEE 210
IM+HQPSGG+ GQA D+ H + I++ LN +Y KH G++ E +++ +DRD+FM+ +E
Sbjct: 129 IMVHQPSGGFRGQASDIERHAEDIIKTKRRLNEIYVKHCGRTYEEVERTLDRDHFMSADE 188
Query: 211 AKEFGIIDEVIDQRPMA 227
AK +G++D V D R A
Sbjct: 189 AKAWGLVDHVYDSREAA 205
>gi|167646810|ref|YP_001684473.1| ATP-dependent Clp protease proteolytic subunit [Caulobacter sp.
K31]
gi|189082451|sp|B0SZQ2.1|CLPP_CAUSK RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|167349240|gb|ABZ71975.1| Endopeptidase Clp [Caulobacter sp. K31]
Length = 208
Score = 265 bits (676), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 119/196 (60%), Positives = 155/196 (79%)
Query: 29 ARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPS 88
A + +L+PMV+E +SRGERA+DIFSRLLKERII + GP+ D A ++ AQLLFLESENP
Sbjct: 6 ATAMNLVPMVVEQTSRGERAFDIFSRLLKERIIFLTGPVEDGMASLICAQLLFLESENPK 65
Query: 89 KPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPN 148
K I MY+NSPGG VTAGLAIYDTMQYI+SP++T+C+G AASMGSLLL +G G R ALPN
Sbjct: 66 KEIAMYINSPGGVVTAGLAIYDTMQYIKSPVSTVCMGMAASMGSLLLQAGAPGHRIALPN 125
Query: 149 STIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTP 208
+ IM+HQPSGG+ GQA D+ H + I++ LN +Y KHTG++ E ++K +DRD+FM+
Sbjct: 126 ARIMVHQPSGGFRGQASDIERHAEDIIKTKRRLNEIYVKHTGRTYEEVEKTLDRDHFMSA 185
Query: 209 EEAKEFGIIDEVIDQR 224
EEAK +G+ID + + R
Sbjct: 186 EEAKAWGLIDHINESR 201
>gi|239977100|sp|P0CAU1.1|CLPP_CAUCR RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|239977114|sp|B8GX16.2|CLPP_CAUCN RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
Length = 209
Score = 265 bits (676), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 117/197 (59%), Positives = 156/197 (79%)
Query: 31 SFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKP 90
+ +L+PMV+E +SRGERA+DIFSRLLKERII + GP+ D A ++ AQLLFLESENP K
Sbjct: 8 AMNLVPMVVEQTSRGERAFDIFSRLLKERIIFLTGPVEDGMASLICAQLLFLESENPKKE 67
Query: 91 IHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNST 150
I MY+NSPGG VTAGLAIYDTMQYI+SP++T+C+G AASMGSLLLA+G G+R +LPN+
Sbjct: 68 IAMYINSPGGVVTAGLAIYDTMQYIKSPVSTVCMGMAASMGSLLLAAGAAGQRISLPNAR 127
Query: 151 IMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEE 210
IM+HQPSGG+ GQA D+ H + I++ LN +Y KH G++ E +++ +DRD+FM+ +E
Sbjct: 128 IMVHQPSGGFRGQASDIERHAEDIIKTKRRLNEIYVKHCGRTYEEVERTLDRDHFMSADE 187
Query: 211 AKEFGIIDEVIDQRPMA 227
AK +G++D V D R A
Sbjct: 188 AKAWGLVDHVYDSRDAA 204
>gi|456354943|dbj|BAM89388.1| ATP-dependent Clp protease proteolytic subunit ClpP [Agromonas
oligotrophica S58]
Length = 210
Score = 265 bits (676), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 119/193 (61%), Positives = 155/193 (80%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E ++RGERAYDIFSRLLKERII + GP+ D + + VAQLLFLE+ENP K I
Sbjct: 10 NLVPMVVEQTNRGERAYDIFSRLLKERIIFVTGPVEDGMSTLTVAQLLFLEAENPKKEIS 69
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
MY+NSPGG VT+GLAIYDTMQ+IR P++T+C GQAASMGSLLL +G K R +LPNS IM
Sbjct: 70 MYINSPGGVVTSGLAIYDTMQFIRPPVSTLCTGQAASMGSLLLCAGHKDMRFSLPNSRIM 129
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
+HQPSGG+ GQA D+ +H ++I+ + LN +Y KHTGQS + I+ ++RD F+T E A
Sbjct: 130 VHQPSGGFQGQATDIMLHAQEILNLKKRLNEIYVKHTGQSYKAIEDALERDKFLTAEAAA 189
Query: 213 EFGIIDEVIDQRP 225
EFG+ID+VI++RP
Sbjct: 190 EFGLIDKVIEKRP 202
>gi|16126206|ref|NP_420770.1| ATP-dependent Clp protease, proteolytic subunit [Caulobacter
crescentus CB15]
gi|3688205|emb|CAA09090.1| endopeptidase clp [Caulobacter crescentus CB15]
gi|13423424|gb|AAK23938.1| ATP-dependent Clp protease, proteolytic subunit [Caulobacter
crescentus CB15]
Length = 210
Score = 265 bits (676), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 117/197 (59%), Positives = 156/197 (79%)
Query: 31 SFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKP 90
+ +L+PMV+E +SRGERA+DIFSRLLKERII + GP+ D A ++ AQLLFLESENP K
Sbjct: 9 AMNLVPMVVEQTSRGERAFDIFSRLLKERIIFLTGPVEDGMASLICAQLLFLESENPKKE 68
Query: 91 IHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNST 150
I MY+NSPGG VTAGLAIYDTMQYI+SP++T+C+G AASMGSLLLA+G G+R +LPN+
Sbjct: 69 IAMYINSPGGVVTAGLAIYDTMQYIKSPVSTVCMGMAASMGSLLLAAGAAGQRISLPNAR 128
Query: 151 IMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEE 210
IM+HQPSGG+ GQA D+ H + I++ LN +Y KH G++ E +++ +DRD+FM+ +E
Sbjct: 129 IMVHQPSGGFRGQASDIERHAEDIIKTKRRLNEIYVKHCGRTYEEVERTLDRDHFMSADE 188
Query: 211 AKEFGIIDEVIDQRPMA 227
AK +G++D V D R A
Sbjct: 189 AKAWGLVDHVYDSRDAA 205
>gi|334143754|ref|YP_004536910.1| ATP-dependent Clp protease proteolytic subunit [Thioalkalimicrobium
cyclicum ALM1]
gi|333964665|gb|AEG31431.1| ATP-dependent Clp protease proteolytic subunit [Thioalkalimicrobium
cyclicum ALM1]
Length = 201
Score = 264 bits (675), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 116/192 (60%), Positives = 159/192 (82%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E +SRGERA+DI+SRLLKER+I + GP+ D A+++VAQ+LFLESENP K IH
Sbjct: 9 ALVPMVVEQTSRGERAFDIYSRLLKERVIFLVGPVEDHMANLIVAQMLFLESENPEKDIH 68
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
+Y+NSPGG VTAG+AIYDTM++I+ ++T+CLGQAASMGS LLA+G KG+R ALPNS +M
Sbjct: 69 LYINSPGGSVTAGMAIYDTMRFIKPDVSTMCLGQAASMGSFLLAAGAKGKRFALPNSRVM 128
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQP GG+ GQA D IH ++I+ + D LN ++TGQ IEVI+++ DRD FM+ E+AK
Sbjct: 129 IHQPLGGFQGQASDFEIHAREILYIKDKLNKALSENTGQPIEVIEQDTDRDNFMSAEKAK 188
Query: 213 EFGIIDEVIDQR 224
++G+ID+V+ +R
Sbjct: 189 DYGLIDQVLAKR 200
>gi|39936026|ref|NP_948302.1| endopeptidase Clp [Rhodopseudomonas palustris CGA009]
gi|192291681|ref|YP_001992286.1| endopeptidase Clp [Rhodopseudomonas palustris TIE-1]
gi|67460293|sp|Q6N5L3.1|CLPP_RHOPA RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|226706467|sp|B3Q7P5.1|CLPP_RHOPT RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|39649880|emb|CAE28402.1| ATP-dependent Clp protease proteolytic subunit [Rhodopseudomonas
palustris CGA009]
gi|192285430|gb|ACF01811.1| Endopeptidase Clp [Rhodopseudomonas palustris TIE-1]
Length = 212
Score = 264 bits (675), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 117/193 (60%), Positives = 157/193 (81%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E ++RGERAYDIFSRLLKERII + GP+ D + ++VAQLLFLE+ENP K I
Sbjct: 10 NLVPMVVEQTNRGERAYDIFSRLLKERIIFVTGPVEDGMSTLIVAQLLFLEAENPKKEIS 69
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
MY+NSPGG VT+GLAIYDTMQ+IR P++T+C GQAASMGSLLLA+G K R +LPN+ IM
Sbjct: 70 MYINSPGGVVTSGLAIYDTMQFIRPPVSTLCTGQAASMGSLLLAAGHKDMRFSLPNARIM 129
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
+HQPSGG+ GQA D+ +H ++I+ + LN +Y HTGQ+ + I+ ++RD F+T E A+
Sbjct: 130 VHQPSGGFQGQATDIMLHAQEILNLKKRLNEIYVHHTGQTYKAIEDALERDKFLTAEMAR 189
Query: 213 EFGIIDEVIDQRP 225
EFGI+D+VI++RP
Sbjct: 190 EFGIVDKVIEKRP 202
>gi|56695904|ref|YP_166255.1| ATP-dependent Clp protease proteolytic subunit [Ruegeria pomeroyi
DSS-3]
gi|67460175|sp|Q5LUQ0.1|CLPP_SILPO RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|56677641|gb|AAV94307.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Ruegeria
pomeroyi DSS-3]
Length = 209
Score = 264 bits (675), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 121/192 (63%), Positives = 157/192 (81%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E +SRGERAYDIFSRLLKERII INGPI+D +H++VAQLL LE+ENP+K I
Sbjct: 11 TLVPMVVEQTSRGERAYDIFSRLLKERIIFINGPIHDGMSHLIVAQLLHLEAENPNKEIS 70
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
+Y+NSPGG VT+GL+IYDTMQYI+ +T+ +GQAASMGS+LLA G KG R +LPNS IM
Sbjct: 71 IYINSPGGVVTSGLSIYDTMQYIKPKCSTLVIGQAASMGSVLLAGGEKGMRFSLPNSRIM 130
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
+HQPSGGY GQA D+ IH + ++ D L +Y KHTGQ+ + ++K +DRD FM+PEEAK
Sbjct: 131 VHQPSGGYQGQASDIMIHAAETQKLKDRLYDIYVKHTGQTKKAVEKALDRDNFMSPEEAK 190
Query: 213 EFGIIDEVIDQR 224
E+G IDE+++ R
Sbjct: 191 EWGHIDEIVESR 202
>gi|254485779|ref|ZP_05098984.1| Clp protease [Roseobacter sp. GAI101]
gi|214042648|gb|EEB83286.1| Clp protease [Roseobacter sp. GAI101]
Length = 215
Score = 264 bits (675), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 117/192 (60%), Positives = 159/192 (82%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E +SRGERAYDIFSRLLKERII ++GP++D + ++VAQLL LE+ENPSK I
Sbjct: 11 TLVPMVVEQTSRGERAYDIFSRLLKERIIFLSGPVHDGMSSLIVAQLLHLEAENPSKEIS 70
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
MY+NSPGG VT+GL+IYDTMQYI+ ++T+ +GQAASMGSLLL +G KG R +LPNS +M
Sbjct: 71 MYINSPGGVVTSGLSIYDTMQYIKPKVSTLVIGQAASMGSLLLQAGEKGMRFSLPNSRVM 130
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
+HQPSGGY GQA D+ IH ++ ++ LN +Y KHTGQS+E ++ ++RD FM+PEEAK
Sbjct: 131 VHQPSGGYQGQATDIMIHAQETQKLKTRLNEIYVKHTGQSLEKVEAALERDNFMSPEEAK 190
Query: 213 EFGIIDEVIDQR 224
++G+IDE+++ R
Sbjct: 191 DWGLIDEIVENR 202
>gi|398823688|ref|ZP_10582044.1| protease subunit of ATP-dependent protease [Bradyrhizobium sp.
YR681]
gi|398225661|gb|EJN11927.1| protease subunit of ATP-dependent protease [Bradyrhizobium sp.
YR681]
Length = 211
Score = 264 bits (675), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 117/192 (60%), Positives = 156/192 (81%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E ++RGERAYDIFSRLLKERII + GP+ D + +VVAQLLFLE+ENP K I
Sbjct: 10 NLVPMVVEQTNRGERAYDIFSRLLKERIIFLTGPVEDGMSTLVVAQLLFLEAENPKKEIS 69
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
MY+NSPGG VT+GLAIYDTMQ+IR P++T+C GQAASMGSLLL +G K R +LPN+ IM
Sbjct: 70 MYINSPGGVVTSGLAIYDTMQFIRPPVSTLCTGQAASMGSLLLCAGEKDMRFSLPNARIM 129
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
+HQPSGG+ GQA D+ +H ++I+ + LN +Y KHTGQ+ + I+ ++RD F+T +AK
Sbjct: 130 VHQPSGGFQGQATDIMLHAQEILNLKKRLNEIYVKHTGQTYKTIEDALERDKFLTANDAK 189
Query: 213 EFGIIDEVIDQR 224
EFG++D+VID+R
Sbjct: 190 EFGLVDKVIDKR 201
>gi|83592885|ref|YP_426637.1| ATP-dependent Clp protease proteolytic subunit ClpP [Rhodospirillum
rubrum ATCC 11170]
gi|386349615|ref|YP_006047863.1| ATP-dependent Clp protease proteolytic subunit ClpP [Rhodospirillum
rubrum F11]
gi|124013826|sp|Q2RU45.1|CLPP_RHORT RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|83575799|gb|ABC22350.1| ATP-dependent Clp protease proteolytic subunit ClpP [Rhodospirillum
rubrum ATCC 11170]
gi|346718051|gb|AEO48066.1| ATP-dependent Clp protease proteolytic subunit ClpP [Rhodospirillum
rubrum F11]
Length = 216
Score = 264 bits (675), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 117/195 (60%), Positives = 158/195 (81%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E ++RGER+YDI+SRLLKERII + G ++D A ++ AQLLFLESENPSK I
Sbjct: 13 TLVPMVVEQTNRGERSYDIYSRLLKERIIFLTGQVHDGVASLICAQLLFLESENPSKDIS 72
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
Y+NSPGG VT+G+AIYDTMQYIRSP++T+C+GQAASMGSLLL +G G+R A PN+ IM
Sbjct: 73 FYINSPGGVVTSGMAIYDTMQYIRSPVSTVCIGQAASMGSLLLCAGEAGKRYATPNARIM 132
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQPSGG+ GQA D+ I ++I+ + + LN +Y KHTGQ +E I++ MDRD +MT EE++
Sbjct: 133 IHQPSGGFQGQAADIEIQAREILALRERLNRIYVKHTGQPLETIERAMDRDNYMTAEESR 192
Query: 213 EFGIIDEVIDQRPMA 227
FG+ D VI++R ++
Sbjct: 193 AFGLTDSVIERRALS 207
>gi|108757731|ref|YP_634562.1| ATP-dependent Clp protease proteolytic subunit [Myxococcus xanthus
DK 1622]
gi|3023519|sp|O30612.1|CLPP2_MYXXD RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|2384690|gb|AAB97819.1| proteosome major subunit [Myxococcus xanthus DK 1622]
gi|108461611|gb|ABF86796.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Myxococcus
xanthus DK 1622]
Length = 203
Score = 264 bits (675), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 117/190 (61%), Positives = 158/190 (83%)
Query: 35 IPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHMY 94
+P VIE + RGERAYD++SRLLK+RII + P+NDD A+++VAQLLFLESE+P K I++Y
Sbjct: 3 VPFVIETTHRGERAYDLYSRLLKDRIIMLGTPVNDDVANIIVAQLLFLESEDPDKGINLY 62
Query: 95 LNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMIH 154
+NSPGG VTAGLAIYDTMQY++ P++TIC+GQAASMG+LLL +G KG+R ALPNS IMIH
Sbjct: 63 INSPGGSVTAGLAIYDTMQYVKCPVSTICVGQAASMGALLLLAGAKGKRYALPNSRIMIH 122
Query: 155 QPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKEF 214
QP GG GQA D+ I K+I+R+ +N L KHTG +IE I+K+ +RDYFM+ E+A+++
Sbjct: 123 QPLGGAQGQATDIDIQAKEILRLRSYINGLIVKHTGHTIERIEKDTERDYFMSAEDARQY 182
Query: 215 GIIDEVIDQR 224
G+IDEV++++
Sbjct: 183 GLIDEVVEKQ 192
>gi|161511142|ref|NP_539791.2| ATP-dependent Clp protease proteolytic subunit [Brucella melitensis
bv. 1 str. 16M]
gi|225852610|ref|YP_002732843.1| ATP-dependent Clp protease proteolytic subunit [Brucella melitensis
ATCC 23457]
gi|256263897|ref|ZP_05466429.1| ATP-dependent Clp protease proteolytic subunit [Brucella melitensis
bv. 2 str. 63/9]
gi|260565631|ref|ZP_05836115.1| ATP-dependent Clp protease proteolytic subunit [Brucella melitensis
bv. 1 str. 16M]
gi|265991190|ref|ZP_06103747.1| ATP-dependent Clp protease proteolytic subunit [Brucella melitensis
bv. 1 str. Rev.1]
gi|265995026|ref|ZP_06107583.1| ATP-dependent Clp protease proteolytic subunit [Brucella melitensis
bv. 3 str. Ether]
gi|384211474|ref|YP_005600556.1| ATP-dependent Clp protease proteolytic subunit [Brucella melitensis
M5-90]
gi|384408582|ref|YP_005597203.1| ATP-dependent Clp protease proteolytic subunit [Brucella melitensis
M28]
gi|384445168|ref|YP_005603887.1| ATP-dependent Clp protease proteolytic subunit [Brucella melitensis
NI]
gi|21759068|sp|Q8YHC8.2|CLPP_BRUME RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|254763784|sp|C0RJ81.1|CLPP_BRUMB RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|225640975|gb|ACO00889.1| ATP-dependent Clp protease proteolytic subunit [Brucella melitensis
ATCC 23457]
gi|260151699|gb|EEW86793.1| ATP-dependent Clp protease proteolytic subunit [Brucella melitensis
bv. 1 str. 16M]
gi|262766139|gb|EEZ11928.1| ATP-dependent Clp protease proteolytic subunit [Brucella melitensis
bv. 3 str. Ether]
gi|263001974|gb|EEZ14549.1| ATP-dependent Clp protease proteolytic subunit [Brucella melitensis
bv. 1 str. Rev.1]
gi|263094029|gb|EEZ17963.1| ATP-dependent Clp protease proteolytic subunit [Brucella melitensis
bv. 2 str. 63/9]
gi|326409129|gb|ADZ66194.1| ATP-dependent Clp protease proteolytic subunit [Brucella melitensis
M28]
gi|326538837|gb|ADZ87052.1| ATP-dependent Clp protease proteolytic subunit [Brucella melitensis
M5-90]
gi|349743159|gb|AEQ08702.1| ATP-dependent Clp protease proteolytic subunit [Brucella melitensis
NI]
Length = 209
Score = 264 bits (675), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 116/195 (59%), Positives = 158/195 (81%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E ++RGERAYDIFSRLLKERII +NGP+ D + +V AQLLFLE+ENP K I+
Sbjct: 10 NLVPMVVEQTNRGERAYDIFSRLLKERIIFVNGPVEDGMSMLVCAQLLFLEAENPKKEIN 69
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
MY+NSPGG VT+G+AIYDTMQ+IR P++T+C+GQAASMGSLLL +G G R AL N+ IM
Sbjct: 70 MYINSPGGVVTSGMAIYDTMQFIRPPVSTLCMGQAASMGSLLLTAGATGHRYALLNARIM 129
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
+HQPSGG+ GQA D+ H + I+++ LN +Y KHTG+ + I++ +DRD+FMT +EA
Sbjct: 130 VHQPSGGFQGQASDIERHAQDIIKMKRRLNEIYVKHTGRDYDTIERTLDRDHFMTAQEAL 189
Query: 213 EFGIIDEVIDQRPMA 227
EFG+ID+V++ R ++
Sbjct: 190 EFGLIDKVVEARDVS 204
>gi|144899460|emb|CAM76324.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Magnetospirillum gryphiswaldense MSR-1]
Length = 214
Score = 264 bits (675), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 116/193 (60%), Positives = 158/193 (81%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E ++RGER+YDI+SRLLKERI+ + G + D+ + ++ AQLLFLESENP+K I
Sbjct: 13 TLVPMVVEQTNRGERSYDIYSRLLKERIVFLTGQVYDEVSTLICAQLLFLESENPNKDIA 72
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
Y+NSPGG VT+GLA+YDTMQYIR ++T+CLGQAASMGSLLL +G KG+R +LPN+ +M
Sbjct: 73 FYINSPGGVVTSGLAMYDTMQYIRPSVSTVCLGQAASMGSLLLTAGAKGKRFSLPNARVM 132
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQPSGG GQA D+ I ++I+ + LN +Y +HTGQ++EVI++ M+RD +MT +EAK
Sbjct: 133 IHQPSGGAQGQATDIEIQAREILALRARLNNMYVQHTGQTLEVIERAMERDKYMTADEAK 192
Query: 213 EFGIIDEVIDQRP 225
EFG+IDEV+ RP
Sbjct: 193 EFGLIDEVVSNRP 205
>gi|392596999|gb|EIW86321.1| hypothetical protein CONPUDRAFT_46589 [Coniophora puteana
RWD-64-598 SS2]
Length = 238
Score = 264 bits (675), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 121/198 (61%), Positives = 157/198 (79%)
Query: 28 SARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENP 87
S S +L+P+VIE + RGER+YDIFSRLL+ER+I + GPIND+ + + VAQLLFLE+E
Sbjct: 33 SPPSANLVPIVIEQTGRGERSYDIFSRLLRERVIMLYGPINDNDSALTVAQLLFLEAEET 92
Query: 88 SKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALP 147
SKPIH+Y+NSPGG VTAGLAIYDTMQY+ SPI+T C+GQA SMGSLLLA+G KG+R LP
Sbjct: 93 SKPIHLYINSPGGSVTAGLAIYDTMQYVSSPIHTYCVGQACSMGSLLLAAGEKGKRHCLP 152
Query: 148 NSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMT 207
N++IMIHQPSGG SGQA D+ IH K+I+RV L ++Y +H + E ++RDYFMT
Sbjct: 153 NASIMIHQPSGGASGQASDIAIHAKEILRVRQLLTSIYQRHCNKEGESEANALERDYFMT 212
Query: 208 PEEAKEFGIIDEVIDQRP 225
EA +FGI+D ++++RP
Sbjct: 213 AREALDFGIVDGILEKRP 230
>gi|399090712|ref|ZP_10754136.1| protease subunit of ATP-dependent protease [Caulobacter sp. AP07]
gi|398027518|gb|EJL21067.1| protease subunit of ATP-dependent protease [Caulobacter sp. AP07]
Length = 208
Score = 264 bits (675), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 118/196 (60%), Positives = 156/196 (79%)
Query: 29 ARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPS 88
A + +L+PMV+E +SRGERA+DIFSRLLKERII + GP+ D A ++ AQLLFLESENP
Sbjct: 6 ATAMNLVPMVVEQTSRGERAFDIFSRLLKERIIFLTGPVEDGMASLICAQLLFLESENPK 65
Query: 89 KPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPN 148
K I MY+NSPGG VT+GLAIYDTMQYI+SP++T+C+G AASMGSLLL +G G+R ALPN
Sbjct: 66 KEIAMYINSPGGVVTSGLAIYDTMQYIKSPVSTVCMGMAASMGSLLLQAGAPGQRIALPN 125
Query: 149 STIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTP 208
+ IM+HQPSGG+ GQA D+ H + I++ LN +Y KHTG++ E ++K +DRD+FM+
Sbjct: 126 ARIMVHQPSGGFRGQASDIERHAEDIIKTKRRLNEIYVKHTGRTYEEVEKTLDRDHFMSA 185
Query: 209 EEAKEFGIIDEVIDQR 224
EEAK +G+ID + + R
Sbjct: 186 EEAKAWGLIDHINESR 201
>gi|91977364|ref|YP_570023.1| endopeptidase Clp [Rhodopseudomonas palustris BisB5]
gi|123721781|sp|Q135W7.1|CLPP_RHOPS RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|91683820|gb|ABE40122.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Rhodopseudomonas palustris BisB5]
Length = 214
Score = 264 bits (675), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 118/192 (61%), Positives = 156/192 (81%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E ++RGERAYDIFSRLLKERII + GP+ D + +VVAQLLFLE+ENP K I
Sbjct: 10 NLVPMVVEQTNRGERAYDIFSRLLKERIIFLTGPVEDGMSTLVVAQLLFLEAENPKKEIS 69
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
MY+NSPGG VT+GLAIYDTMQ+IR P++T+C GQAASMGSLLLA+G K R +LPN+ IM
Sbjct: 70 MYINSPGGVVTSGLAIYDTMQFIRPPVSTLCTGQAASMGSLLLAAGHKDMRFSLPNARIM 129
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
+HQPSGG+ GQA D+ +H ++I+ + LN +Y HTGQ+ + I+ ++RD F+T E A+
Sbjct: 130 VHQPSGGFQGQATDIMLHAQEILNLKKRLNEIYVHHTGQTYKAIEDALERDKFLTAEMAR 189
Query: 213 EFGIIDEVIDQR 224
EFGI+D+VID+R
Sbjct: 190 EFGIVDKVIDKR 201
>gi|115524517|ref|YP_781428.1| endopeptidase Clp [Rhodopseudomonas palustris BisA53]
gi|122296222|sp|Q07NN6.1|CLPP_RHOP5 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|115518464|gb|ABJ06448.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Rhodopseudomonas palustris BisA53]
Length = 211
Score = 264 bits (674), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 116/193 (60%), Positives = 157/193 (81%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E ++RGERAYDIFSRLLKERII + GP+ D + +VVAQLLFLE+ENP K I
Sbjct: 10 NLVPMVVEQTNRGERAYDIFSRLLKERIIFLTGPVEDGMSTLVVAQLLFLEAENPKKEIS 69
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
MY+NSPGG VT+GLAIYDTMQ+IR P++T+C GQAASMGSLLL +G K R +LPN+ IM
Sbjct: 70 MYINSPGGVVTSGLAIYDTMQFIRPPVSTLCTGQAASMGSLLLCAGAKDMRFSLPNARIM 129
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
+HQPSGG+ GQA D+ +H ++I+ + LN +Y KHTGQ+ + I+ ++RD F+T + A+
Sbjct: 130 VHQPSGGFQGQATDIMLHAQEILNLKKRLNEIYVKHTGQTYKAIEDALERDKFLTADMAR 189
Query: 213 EFGIIDEVIDQRP 225
+FG++D+VID+RP
Sbjct: 190 DFGLVDKVIDKRP 202
>gi|327264015|ref|XP_003216812.1| PREDICTED: putative ATP-dependent Clp protease proteolytic subunit,
mitochondrial-like [Anolis carolinensis]
Length = 266
Score = 264 bits (674), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 123/213 (57%), Positives = 163/213 (76%)
Query: 13 MATKFLQLSKPSAQISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTA 72
+ L +S+ Q LIP+V+E + RGERAYDI+SRLL+ERI+C+ GPI+D A
Sbjct: 27 LGCHILSVSRCLHQSPRNHIPLIPIVVEQTGRGERAYDIYSRLLRERIVCVMGPIDDGVA 86
Query: 73 HVVVAQLLFLESENPSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGS 132
+V+AQLLFL+SE+ KPIHMY+NSPGG VT+GLAIYDTMQYI +PI T C+GQAASMGS
Sbjct: 87 SLVIAQLLFLQSESNKKPIHMYINSPGGTVTSGLAIYDTMQYILNPICTWCVGQAASMGS 146
Query: 133 LLLASGTKGERRALPNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQS 192
LLLA+G+ G R +LPNS IMIHQPSGG GQA D+ I ++I+++ +N +Y KHT Q+
Sbjct: 147 LLLAAGSPGMRHSLPNSRIMIHQPSGGARGQATDIAIQAEEILKLKKQINGIYAKHTKQN 206
Query: 193 IEVIQKNMDRDYFMTPEEAKEFGIIDEVIDQRP 225
+EVI+ M+RD +M+P EA+EFGI+D+V+ P
Sbjct: 207 LEVIEAAMERDRYMSPVEAQEFGILDKVLVHPP 239
>gi|221234978|ref|YP_002517414.1| ATP-dependent Clp protease proteolytic subunit [Caulobacter
crescentus NA1000]
gi|220964150|gb|ACL95506.1| ATP-dependent endopeptidase clp, proteolytic subunit ClpP
[Caulobacter crescentus NA1000]
Length = 213
Score = 264 bits (674), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 117/197 (59%), Positives = 156/197 (79%)
Query: 31 SFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKP 90
+ +L+PMV+E +SRGERA+DIFSRLLKERII + GP+ D A ++ AQLLFLESENP K
Sbjct: 12 AMNLVPMVVEQTSRGERAFDIFSRLLKERIIFLTGPVEDGMASLICAQLLFLESENPKKE 71
Query: 91 IHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNST 150
I MY+NSPGG VTAGLAIYDTMQYI+SP++T+C+G AASMGSLLLA+G G+R +LPN+
Sbjct: 72 IAMYINSPGGVVTAGLAIYDTMQYIKSPVSTVCMGMAASMGSLLLAAGAAGQRISLPNAR 131
Query: 151 IMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEE 210
IM+HQPSGG+ GQA D+ H + I++ LN +Y KH G++ E +++ +DRD+FM+ +E
Sbjct: 132 IMVHQPSGGFRGQASDIERHAEDIIKTKRRLNEIYVKHCGRTYEEVERTLDRDHFMSADE 191
Query: 211 AKEFGIIDEVIDQRPMA 227
AK +G++D V D R A
Sbjct: 192 AKAWGLVDHVYDSRDAA 208
>gi|389742138|gb|EIM83325.1| hypothetical protein STEHIDRAFT_63367 [Stereum hirsutum FP-91666
SS1]
Length = 254
Score = 264 bits (674), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 127/224 (56%), Positives = 164/224 (73%), Gaps = 18/224 (8%)
Query: 21 SKPSAQISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLL 80
S PSA L+P+VIE + RGER+YDIFSRLL+ER+I + GPI D + + VAQLL
Sbjct: 40 SSPSAN------GLVPIVIEQTGRGERSYDIFSRLLRERVIMLYGPIRDTDSALTVAQLL 93
Query: 81 FLESENPSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTK 140
FLE+E SKPIH+Y+NSPGG VTAGLAIYDTMQY+ SPI+T C+GQA+SMGSLLLA+G K
Sbjct: 94 FLEAEETSKPIHLYINSPGGSVTAGLAIYDTMQYVSSPIHTYCVGQASSMGSLLLAAGEK 153
Query: 141 GERRALPNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTG-------QSI 193
G+R LPN++IMIHQPSGG SGQA D+ IH K+I+R+ + L +Y +H G Q
Sbjct: 154 GKRHCLPNASIMIHQPSGGASGQATDIAIHAKEILRIREVLTGIYQRHCGKPTESAEQGF 213
Query: 194 EVIQKNMDRDYFMTPEEAKEFGIIDEVIDQRPMALVTDAVGREG 237
E + ++RDYFMT +EA EFGI+D ++++RP + G EG
Sbjct: 214 ERFRTALERDYFMTAQEALEFGIVDGILEKRP-----NLTGNEG 252
>gi|158423232|ref|YP_001524524.1| ATP-dependent Clp protease proteolytic subunit [Azorhizobium
caulinodans ORS 571]
gi|172047856|sp|A8HYF2.1|CLPP_AZOC5 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|158330121|dbj|BAF87606.1| ATP-dependent Clp protease proteolytic subunit [Azorhizobium
caulinodans ORS 571]
Length = 210
Score = 264 bits (674), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 119/192 (61%), Positives = 153/192 (79%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
L+PMV+E ++RGERAYDI+SRLLKERII + GP+ D + + VAQLLFLE+ENP K I M
Sbjct: 12 LVPMVVEQTNRGERAYDIYSRLLKERIIFLTGPVEDGMSTLAVAQLLFLEAENPKKEISM 71
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VT+GLAIYDTMQ+IR ++T+C+GQAASMGSLLL +G KG R ALPN+ IM+
Sbjct: 72 YINSPGGVVTSGLAIYDTMQFIRPAVSTLCIGQAASMGSLLLTAGEKGLRFALPNARIMV 131
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQPSGG+ GQ D+ +H ++I+ + LN +Y KHTGQ IE I+ ++RD FMT A+E
Sbjct: 132 HQPSGGFQGQVTDIMLHAQEILSLKKRLNEIYVKHTGQPIEKIEDALERDNFMTANAAQE 191
Query: 214 FGIIDEVIDQRP 225
FG+ID VID+RP
Sbjct: 192 FGLIDTVIDKRP 203
>gi|118791462|ref|XP_319765.3| AGAP009019-PA [Anopheles gambiae str. PEST]
gi|116117612|gb|EAA14822.3| AGAP009019-PA [Anopheles gambiae str. PEST]
Length = 225
Score = 264 bits (674), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 120/197 (60%), Positives = 157/197 (79%), Gaps = 1/197 (0%)
Query: 30 RSF-SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPS 88
+SF +L+P+V+E + RGERAYDIFSRLLKERIIC+ GPI+DD + ++VAQLLFL+SEN +
Sbjct: 22 KSFLNLVPIVVEQTGRGERAYDIFSRLLKERIICLMGPIHDDLSSLIVAQLLFLQSENGT 81
Query: 89 KPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPN 148
KPIHMY+NSPGG VTAGLAIYDTMQY++ P+ T C+GQA SMGSLLLA+G G R +LPN
Sbjct: 82 KPIHMYINSPGGSVTAGLAIYDTMQYVKPPVATWCVGQACSMGSLLLAAGAPGMRHSLPN 141
Query: 149 STIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTP 208
+ IMIHQPSGG GQA D+ I ++I+++ L +Y KHT S++V+ M+RD F++P
Sbjct: 142 ARIMIHQPSGGAQGQATDIQIQAEEILKLKKQLTEIYGKHTKTSLDVLYSKMERDTFLSP 201
Query: 209 EEAKEFGIIDEVIDQRP 225
EEA+ GIID V++ P
Sbjct: 202 EEAQTLGIIDTVLEHPP 218
>gi|153955960|ref|YP_001396725.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
kluyveri DSM 555]
gi|219856302|ref|YP_002473424.1| hypothetical protein CKR_2959 [Clostridium kluyveri NBRC 12016]
gi|189082452|sp|A5N2K8.1|CLPP_CLOK5 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|254763788|sp|B9E685.1|CLPP_CLOK1 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|146348818|gb|EDK35354.1| ClpP [Clostridium kluyveri DSM 555]
gi|219570026|dbj|BAH08010.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 194
Score = 264 bits (674), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 117/192 (60%), Positives = 158/192 (82%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
SL+P+V+E ++RGER+YDI+SRLLK+RI+ ++ +ND TA ++VAQLLFLE+ENP K I+
Sbjct: 2 SLVPVVVEQTNRGERSYDIYSRLLKDRIVMLSEEVNDVTASLIVAQLLFLEAENPDKDIY 61
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
Y+NSPGG +TAG+AIYDTMQYI+S ++TIC+G AASMG+ LLA+G KG+R ALPNS IM
Sbjct: 62 FYINSPGGSITAGMAIYDTMQYIKSDVSTICIGMAASMGAFLLAAGEKGKRFALPNSEIM 121
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQP GG+ GQA D+ IH +I+R+ LNA+ + TGQSIE ++K+ +RD FMT EEAK
Sbjct: 122 IHQPLGGFQGQATDIGIHADRILRIKKKLNAIISERTGQSIEKVEKDTERDNFMTAEEAK 181
Query: 213 EFGIIDEVIDQR 224
E+G+IDEV ++
Sbjct: 182 EYGLIDEVFTKK 193
>gi|346995188|ref|ZP_08863260.1| ATP-dependent Clp protease proteolytic subunit [Ruegeria sp. TW15]
Length = 210
Score = 264 bits (674), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 121/192 (63%), Positives = 157/192 (81%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E +SRGERAYDIFSRLLKERII INGPI+D +H+VVAQLL LE+ENP+K I
Sbjct: 11 TLVPMVVEQTSRGERAYDIFSRLLKERIIFINGPIHDGMSHLVVAQLLHLEAENPNKEIS 70
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
+Y+NSPGG VT+GL+IYDTMQYI+ +T+ +GQAASMGS+LLA G KG R +LPNS IM
Sbjct: 71 IYINSPGGVVTSGLSIYDTMQYIKPKCSTLVIGQAASMGSVLLAGGEKGMRFSLPNSRIM 130
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
+HQPSGGY GQA D+ IH + ++ D L +Y +HTGQ+ + ++K +DRD FM+PEEAK
Sbjct: 131 VHQPSGGYQGQASDIMIHAAETQKLKDRLYDIYVRHTGQTKKAVEKALDRDNFMSPEEAK 190
Query: 213 EFGIIDEVIDQR 224
E+G IDE+++ R
Sbjct: 191 EWGHIDEIVENR 202
>gi|190573022|ref|YP_001970867.1| ATP-dependent Clp protease proteolytic subunit [Stenotrophomonas
maltophilia K279a]
gi|194364614|ref|YP_002027224.1| ATP-dependent Clp protease proteolytic subunit [Stenotrophomonas
maltophilia R551-3]
gi|344206260|ref|YP_004791401.1| ATP-dependent Clp protease proteolytic subunit [Stenotrophomonas
maltophilia JV3]
gi|408823480|ref|ZP_11208370.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
geniculata N1]
gi|424667284|ref|ZP_18104309.1| ATP-dependent Clp protease proteolytic subunit [Stenotrophomonas
maltophilia Ab55555]
gi|226706475|sp|B2FQR2.1|CLPP_STRMK RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|190010944|emb|CAQ44553.1| ATP-dependent clp protease proteolytic subunit [Stenotrophomonas
maltophilia K279a]
gi|194347418|gb|ACF50541.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Stenotrophomonas maltophilia R551-3]
gi|343777622|gb|AEM50175.1| ATP-dependent Clp protease proteolytic subunit [Stenotrophomonas
maltophilia JV3]
gi|401069419|gb|EJP77941.1| ATP-dependent Clp protease proteolytic subunit [Stenotrophomonas
maltophilia Ab55555]
gi|456738229|gb|EMF62906.1| ATP-dependent Clp protease proteolytic subunit [Stenotrophomonas
maltophilia EPM1]
Length = 208
Score = 264 bits (674), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 118/196 (60%), Positives = 160/196 (81%)
Query: 30 RSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSK 89
++ +L+PMV+E +SRGERAYDI+SRLLKER+I + GPI+D A+VVVAQLLFLESENP K
Sbjct: 6 KALNLVPMVVEQTSRGERAYDIYSRLLKERLIFLVGPIDDHMANVVVAQLLFLESENPEK 65
Query: 90 PIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNS 149
I++Y+NSPGG VTAG+AIYDTMQYI+ ++T C+GQAASMG+LLLA+G G+R ALPNS
Sbjct: 66 DINIYINSPGGVVTAGMAIYDTMQYIKPNVSTTCIGQAASMGALLLAAGEAGKRYALPNS 125
Query: 150 TIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPE 209
+MIHQP GGY GQA D+ IH ++I+ + LN + KHTGQS+E I ++ +RD F +
Sbjct: 126 RVMIHQPLGGYQGQATDIDIHAREILTLRSRLNEVLAKHTGQSLETIARDTERDNFKSAF 185
Query: 210 EAKEFGIIDEVIDQRP 225
EA+ +G++D+V+++RP
Sbjct: 186 EAQAYGLVDQVLERRP 201
>gi|389756357|ref|ZP_10191467.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Rhodanobacter
sp. 115]
gi|388431605|gb|EIL88663.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Rhodanobacter
sp. 115]
Length = 209
Score = 264 bits (674), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 120/203 (59%), Positives = 161/203 (79%)
Query: 30 RSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSK 89
++ +LIPMV+E ++RGER+YDI+SRLLKER+I + GPI+D+ A+V+VAQ+LFLESENP K
Sbjct: 7 QNLNLIPMVVEQTARGERSYDIYSRLLKERVIFLVGPIDDNVANVIVAQMLFLESENPDK 66
Query: 90 PIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNS 149
IH Y+NSPGG VTAGLAIYDTMQ+I+ ++T+C+GQA S GSLLL +G G+R ALPNS
Sbjct: 67 DIHFYINSPGGVVTAGLAIYDTMQFIKPDVSTMCIGQACSAGSLLLMAGAAGKRFALPNS 126
Query: 150 TIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPE 209
+MIHQPSGG GQA D+ IH K+I+ + LN LY HTG+ IE I +M+RD F++ E
Sbjct: 127 RVMIHQPSGGAQGQATDIEIHAKEILYLRQRLNGLYAHHTGKPIEEIAHDMERDRFLSAE 186
Query: 210 EAKEFGIIDEVIDQRPMALVTDA 232
+AK +G+ID+V+D+R + V A
Sbjct: 187 DAKTYGLIDQVLDKRAVDTVKSA 209
>gi|405363134|ref|ZP_11026132.1| ATP-dependent Clp protease proteolytic subunit [Chondromyces
apiculatus DSM 436]
gi|397090077|gb|EJJ20963.1| ATP-dependent Clp protease proteolytic subunit [Myxococcus sp.
(contaminant ex DSM 436)]
Length = 203
Score = 264 bits (674), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 116/190 (61%), Positives = 158/190 (83%)
Query: 35 IPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHMY 94
+P VIE + RGERAYD++SRLLK+RII + P+NDD A+++VAQLLFLESE+P K I++Y
Sbjct: 3 VPFVIETTHRGERAYDLYSRLLKDRIIMLGTPVNDDVANIIVAQLLFLESEDPDKGINLY 62
Query: 95 LNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMIH 154
+NSPGG VTAGLAIYDTMQY++ P++TIC+GQAASMG+LLL +G KG+R ALPNS IMIH
Sbjct: 63 INSPGGSVTAGLAIYDTMQYVKCPVSTICVGQAASMGALLLLAGAKGKRYALPNSRIMIH 122
Query: 155 QPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKEF 214
QP GG GQA D+ I K+I+R+ +N L KHTG ++E I+K+ +RDYFM+ E+A+++
Sbjct: 123 QPLGGAQGQATDIDIQAKEILRLRSYINGLIVKHTGHTVERIEKDTERDYFMSAEDARQY 182
Query: 215 GIIDEVIDQR 224
G+IDEV++++
Sbjct: 183 GLIDEVVEKQ 192
>gi|114767020|ref|ZP_01445928.1| Protease subunit of ATP-dependent Clp protease [Pelagibaca
bermudensis HTCC2601]
gi|114540804|gb|EAU43868.1| Protease subunit of ATP-dependent Clp protease [Roseovarius sp.
HTCC2601]
Length = 210
Score = 264 bits (674), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 117/195 (60%), Positives = 159/195 (81%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E +SRGERAYDIFSRLLKERII ++GP++D + ++VAQLL LE+ENPSK I
Sbjct: 11 TLVPMVVEQTSRGERAYDIFSRLLKERIIFVSGPVHDGMSSLIVAQLLHLEAENPSKEIS 70
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
MY+NSPGG VT+GL+IYDTMQYIR ++T+ +GQAASMGSLLL +G G R +LPNS IM
Sbjct: 71 MYINSPGGVVTSGLSIYDTMQYIRPKVSTLVIGQAASMGSLLLTAGEAGMRFSLPNSRIM 130
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
+HQPSGGY GQA D+ IH ++ +++ LN +Y +HTGQ++E ++ ++RD FM PE+AK
Sbjct: 131 VHQPSGGYQGQATDIMIHAEETLKLKRRLNEIYVRHTGQTLENVEAALERDNFMAPEDAK 190
Query: 213 EFGIIDEVIDQRPMA 227
E+G+IDE+++ R A
Sbjct: 191 EWGLIDEIVESRGAA 205
>gi|254469734|ref|ZP_05083139.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudovibrio
sp. JE062]
gi|374331792|ref|YP_005081976.1| ATP-dependent Clp protease proteolytic subunit [Pseudovibrio sp.
FO-BEG1]
gi|211961569|gb|EEA96764.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudovibrio
sp. JE062]
gi|359344580|gb|AEV37954.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Pseudovibrio sp. FO-BEG1]
Length = 211
Score = 264 bits (674), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 116/192 (60%), Positives = 158/192 (82%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
SL+PMV+E ++RGERAYDIFSRLLKERII + GP+ D A +V +QLL+LE+ENP+K I
Sbjct: 11 SLVPMVVEQTNRGERAYDIFSRLLKERIIFLTGPVEDTMATLVCSQLLYLEAENPNKEIA 70
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
+Y+NSPGG VT+GLAIYDTMQ+IR I+T+C+GQAASMGSLLLA+G KG R +LPNS +M
Sbjct: 71 LYINSPGGVVTSGLAIYDTMQFIRPKISTLCIGQAASMGSLLLAAGEKGMRFSLPNSRVM 130
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
+HQPSGG+ GQA D+ +H ++I+++ LN +Y HTGQ++E +++ ++RD FM+ + AK
Sbjct: 131 VHQPSGGFRGQAADIMLHAQEILKLKRRLNEIYVSHTGQTLEAVEEALERDNFMSADAAK 190
Query: 213 EFGIIDEVIDQR 224
EFG+ID VI+ R
Sbjct: 191 EFGLIDNVIENR 202
>gi|384261374|ref|YP_005416560.1| ATP-dependent Clp protease proteolytic subunit [Rhodospirillum
photometricum DSM 122]
gi|378402474|emb|CCG07590.1| ATP-dependent Clp protease proteolytic subunit [Rhodospirillum
photometricum DSM 122]
Length = 300
Score = 263 bits (673), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 121/206 (58%), Positives = 160/206 (77%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E ++RGERAYDI+SRLLKERII + G ++D + ++ AQLLFLESENPSK I
Sbjct: 94 TLVPMVVEQTNRGERAYDIYSRLLKERIIFLTGQVHDGVSSLICAQLLFLESENPSKDIA 153
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
Y+NSPGG VT+G+AIYDTM YIR P++T+C+GQAASMGSLLL +G G+R A PN+ IM
Sbjct: 154 FYINSPGGVVTSGMAIYDTMHYIRCPVSTVCIGQAASMGSLLLCAGAPGKRYATPNARIM 213
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQPSGG+ GQA D+ I ++I+ + + LN +Y +HTGQ++E I++ MDRD +MT EEA
Sbjct: 214 IHQPSGGFQGQAADIEIQAREILALRERLNRVYVRHTGQTLETIERAMDRDNYMTAEEAT 273
Query: 213 EFGIIDEVIDQRPMALVTDAVGREGK 238
FG+IDEVI+ RP +A E K
Sbjct: 274 AFGLIDEVIESRPKGAEDEAPPTETK 299
>gi|195051114|ref|XP_001993036.1| GH13604 [Drosophila grimshawi]
gi|193900095|gb|EDV98961.1| GH13604 [Drosophila grimshawi]
Length = 255
Score = 263 bits (673), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 125/215 (58%), Positives = 155/215 (72%)
Query: 27 ISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESEN 86
+S R +LIPMV+E + RGERAYDIFSRLLKERIIC+ G I DD + VVAQLLFL+SEN
Sbjct: 22 LSVRGINLIPMVVEQTGRGERAYDIFSRLLKERIICLMGNITDDISSTVVAQLLFLQSEN 81
Query: 87 PSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRAL 146
+KPIH+Y+NSPGG VTAGLAIYDTMQY++ PI T C+GQA SMGSLLLA+G G R +L
Sbjct: 82 VNKPIHLYINSPGGVVTAGLAIYDTMQYVKPPIATWCVGQACSMGSLLLAAGAPGMRYSL 141
Query: 147 PNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFM 206
PN+ IMIHQPSGG GQA D+ IH ++I+++ L +Y KH + M+RD+FM
Sbjct: 142 PNARIMIHQPSGGAQGQATDILIHAEEIIKIKRQLTNIYVKHAQYDYAEMSSRMERDHFM 201
Query: 207 TPEEAKEFGIIDEVIDQRPMALVTDAVGREGKEGK 241
TPEEAK GIID V++ P + + GK
Sbjct: 202 TPEEAKVLGIIDHVLEHPPETVSDSGPASDPPSGK 236
>gi|17982823|gb|AAL52055.1| ATP-dependent clp protease proteolytic subunit [Brucella melitensis
bv. 1 str. 16M]
Length = 247
Score = 263 bits (673), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 116/192 (60%), Positives = 156/192 (81%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E ++RGERAYDIFSRLLKERII +NGP+ D + +V AQLLFLE+ENP K I+
Sbjct: 48 NLVPMVVEQTNRGERAYDIFSRLLKERIIFVNGPVEDGMSMLVCAQLLFLEAENPKKEIN 107
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
MY+NSPGG VT+G+AIYDTMQ+IR P++T+C+GQAASMGSLLL +G G R AL N+ IM
Sbjct: 108 MYINSPGGVVTSGMAIYDTMQFIRPPVSTLCMGQAASMGSLLLTAGATGHRYALLNARIM 167
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
+HQPSGG+ GQA D+ H + I+++ LN +Y KHTG+ + I++ +DRD+FMT +EA
Sbjct: 168 VHQPSGGFQGQASDIERHAQDIIKMKRRLNEIYVKHTGRDYDTIERTLDRDHFMTAQEAL 227
Query: 213 EFGIIDEVIDQR 224
EFG+ID+V++ R
Sbjct: 228 EFGLIDKVVEAR 239
>gi|352101155|ref|ZP_08958578.1| ATP-dependent Clp protease proteolytic subunit [Halomonas sp. HAL1]
gi|350600639|gb|EHA16700.1| ATP-dependent Clp protease proteolytic subunit [Halomonas sp. HAL1]
Length = 205
Score = 263 bits (673), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 114/192 (59%), Positives = 155/192 (80%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
L+PMV+E S++GERAYDI+SRLLKER+I + GP+ D A++VVAQLLFLESENP K IH+
Sbjct: 12 LVPMVVEQSAKGERAYDIYSRLLKERVIFLVGPVEDYMANLVVAQLLFLESENPDKDIHL 71
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VTAG++IYDTMQ+++ ++T+C+GQAASMG+LLL +G G+R LPNS +MI
Sbjct: 72 YINSPGGSVTAGMSIYDTMQFVKPDVSTVCIGQAASMGALLLTAGAAGKRYCLPNSRVMI 131
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQP GGY GQA D+ IHT++I+ + + LN + HTGQ IE + ++ DRD FM+ +A E
Sbjct: 132 HQPLGGYQGQASDIEIHTREILGIREKLNQILAHHTGQDIETVSRDTDRDNFMSANKATE 191
Query: 214 FGIIDEVIDQRP 225
+G+ID V+D+RP
Sbjct: 192 YGLIDAVLDKRP 203
>gi|386402534|ref|ZP_10087312.1| protease subunit of ATP-dependent protease [Bradyrhizobium sp.
WSM1253]
gi|385743160|gb|EIG63356.1| protease subunit of ATP-dependent protease [Bradyrhizobium sp.
WSM1253]
Length = 211
Score = 263 bits (673), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 116/192 (60%), Positives = 155/192 (80%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E ++RGERAYDIFSRLLKERII + GP+ D + ++VAQLLFLE+ENP K I
Sbjct: 10 NLVPMVVEQTNRGERAYDIFSRLLKERIIFLTGPVEDGMSTLIVAQLLFLEAENPKKEIS 69
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
MY+NSPGG VT+GLAIYDTMQ+IR P++T+C GQAASMGSLLL +G K R +LPN+ IM
Sbjct: 70 MYINSPGGVVTSGLAIYDTMQFIRPPVSTLCTGQAASMGSLLLCAGEKDMRFSLPNARIM 129
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
+HQPSGG+ GQA D+ +H ++I+ + LN +Y KHTGQ+ + I+ ++RD F+T +AK
Sbjct: 130 VHQPSGGFQGQATDIMLHAQEILNLKKRLNEIYVKHTGQTYKAIEDALERDKFLTASDAK 189
Query: 213 EFGIIDEVIDQR 224
EFG++D VID+R
Sbjct: 190 EFGLVDRVIDKR 201
>gi|418296068|ref|ZP_12907912.1| ATP-dependent Clp protease proteolytic subunit [Agrobacterium
tumefaciens CCNWGS0286]
gi|355539500|gb|EHH08738.1| ATP-dependent Clp protease proteolytic subunit [Agrobacterium
tumefaciens CCNWGS0286]
Length = 210
Score = 263 bits (673), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 115/194 (59%), Positives = 157/194 (80%)
Query: 31 SFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKP 90
+ +L+PMV+E ++RGER+YDIFSRLLKERII + GP+ D A +V AQLLFLE+ENP K
Sbjct: 8 AMALVPMVVEQTNRGERSYDIFSRLLKERIIFLTGPVEDQMASLVCAQLLFLEAENPKKE 67
Query: 91 IHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNST 150
I +Y+NSPGG VTAG+AIYDTMQ+IR ++T+C+GQAASMGSLLLA+G KG R A PN+
Sbjct: 68 IALYINSPGGVVTAGMAIYDTMQFIRPAVSTLCVGQAASMGSLLLAAGEKGMRFATPNAR 127
Query: 151 IMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEE 210
IM+HQPSGG+ GQA D+ H + I+++ LN +Y KHTG+++E ++K +DRD+FM +E
Sbjct: 128 IMVHQPSGGFQGQASDIERHARDIIKMKRRLNEVYVKHTGRTLEEVEKTLDRDHFMDADE 187
Query: 211 AKEFGIIDEVIDQR 224
AKE+G+ID+++ R
Sbjct: 188 AKEWGVIDKILTSR 201
>gi|307544936|ref|YP_003897415.1| ATP-dependent Clp protease proteolytic subunit [Halomonas elongata
DSM 2581]
gi|307216960|emb|CBV42230.1| ATP-dependent Clp protease proteolytic subunit [Halomonas elongata
DSM 2581]
Length = 206
Score = 263 bits (673), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 117/192 (60%), Positives = 154/192 (80%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
L+PMV+E S+RGER+YDI+SRLLKER+I + GP+ D TA+++VAQLLFLESENP K IH+
Sbjct: 13 LVPMVVEQSARGERSYDIYSRLLKERVIFLVGPVEDYTANLLVAQLLFLESENPDKDIHL 72
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VTAG++IYDTMQ+I+ ++T+C+GQAASMG+LLLA G G+R LPNS +MI
Sbjct: 73 YINSPGGSVTAGMSIYDTMQFIKPDVSTVCIGQAASMGALLLAGGAHGKRYCLPNSRMMI 132
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQP GGY GQA D+ IHT++I+ + + LN + HTGQ E I K+ DRD FM +A E
Sbjct: 133 HQPLGGYQGQASDIEIHTREILGIRERLNQILAHHTGQKFETIAKDTDRDNFMNGAQAAE 192
Query: 214 FGIIDEVIDQRP 225
+G+ID V+D+RP
Sbjct: 193 YGLIDAVLDKRP 204
>gi|75676090|ref|YP_318511.1| peptidase S14, ClpP [Nitrobacter winogradskyi Nb-255]
gi|90101410|sp|Q3SRD2.1|CLPP_NITWN RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|74420960|gb|ABA05159.1| ATP-dependent Clp protease proteolytic subunit ClpP [Nitrobacter
winogradskyi Nb-255]
Length = 212
Score = 263 bits (673), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 117/192 (60%), Positives = 156/192 (81%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E ++RGERAYDIFSRLLKERII + G + D+ + +VVAQLLFLE+ENP K I
Sbjct: 10 NLVPMVVEQTNRGERAYDIFSRLLKERIIFVTGGVEDNMSMLVVAQLLFLEAENPKKEIS 69
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
MY+NSPGG VT+GLAIYDTMQ+IR P+ T+C GQAASMGSLLLA+G K R ALPN+ IM
Sbjct: 70 MYINSPGGVVTSGLAIYDTMQFIRPPVATLCTGQAASMGSLLLAAGEKDMRHALPNARIM 129
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
+HQPSGG+ GQA D+ +H ++I+ + LN +Y KHTGQ+ + I+ ++RD F+T + A+
Sbjct: 130 VHQPSGGFQGQATDIMLHAQEILSLKKRLNEIYVKHTGQTYQAIEDALERDKFLTADMAR 189
Query: 213 EFGIIDEVIDQR 224
+FGI+D+VID+R
Sbjct: 190 DFGIVDKVIDKR 201
>gi|258514515|ref|YP_003190737.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfotomaculum acetoxidans DSM 771]
gi|257778220|gb|ACV62114.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfotomaculum acetoxidans DSM 771]
Length = 194
Score = 263 bits (673), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 117/192 (60%), Positives = 160/192 (83%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+P+V+E ++RGER+YDI+SRLLK+RII I GPI D TA++++AQLLFLE+E+P K IH
Sbjct: 3 TLVPIVVEQTNRGERSYDIYSRLLKDRIIFIGGPIEDYTANLIIAQLLFLEAEDPEKDIH 62
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
+Y+NSPGG VTAG+AIYDTMQYI+ P++TICLGQAASMGS LLA+G G+R ALP + IM
Sbjct: 63 LYINSPGGVVTAGMAIYDTMQYIKPPVSTICLGQAASMGSFLLAAGAPGKRFALPYARIM 122
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQPSGG GQA D+ IH K+I+R+ + LN L KHT Q ++ I ++ +RD+FM+ E+AK
Sbjct: 123 IHQPSGGMQGQATDIGIHAKEILRMKEILNKLLSKHTKQPLDKITRDSERDFFMSAEDAK 182
Query: 213 EFGIIDEVIDQR 224
E+GIID+++ ++
Sbjct: 183 EYGIIDQIVTRK 194
>gi|195384926|ref|XP_002051163.1| GJ13731 [Drosophila virilis]
gi|194147620|gb|EDW63318.1| GJ13731 [Drosophila virilis]
Length = 254
Score = 263 bits (673), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 123/208 (59%), Positives = 155/208 (74%)
Query: 30 RSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSK 89
R +LIPMV+E + RGERAYDIFSRLLKERIIC+ G I DD + VVAQLLFL+SEN +K
Sbjct: 25 RGINLIPMVVEQTGRGERAYDIFSRLLKERIICLMGNITDDISSTVVAQLLFLQSENVNK 84
Query: 90 PIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNS 149
PIH+Y+NSPGG VTAGLAIYDTMQY++ PI T C+GQA SMGSLLLA+G G R +LPN+
Sbjct: 85 PIHLYINSPGGVVTAGLAIYDTMQYVKPPIATWCVGQACSMGSLLLAAGAPGMRYSLPNA 144
Query: 150 TIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPE 209
IMIHQPSGG GQA D+ IH ++I+++ L +Y KH + + + M+RD+FMTPE
Sbjct: 145 RIMIHQPSGGAQGQATDILIHAEEIIKIKRQLTNIYVKHAKNNYDEMCARMERDHFMTPE 204
Query: 210 EAKEFGIIDEVIDQRPMALVTDAVGREG 237
EAK GIID V++ P + + +G
Sbjct: 205 EAKTLGIIDHVLEHPPETVADNGPTSDG 232
>gi|375106291|ref|ZP_09752552.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Burkholderiales bacterium JOSHI_001]
gi|374667022|gb|EHR71807.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Burkholderiales bacterium JOSHI_001]
Length = 202
Score = 263 bits (672), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 115/195 (58%), Positives = 159/195 (81%)
Query: 30 RSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSK 89
+ ++P+VIE S RGERAYDI+SRLL+ERII + GP+ND TA++VVAQLLFLESENP K
Sbjct: 7 QGLGMVPIVIEQSGRGERAYDIYSRLLRERIIFLVGPVNDATANLVVAQLLFLESENPDK 66
Query: 90 PIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNS 149
I +Y+NSPGG V+AG++I+DTMQ+I+ ++T+C+G AASMGS LL +G KG+R ALPNS
Sbjct: 67 EISLYINSPGGSVSAGMSIFDTMQFIKPEVSTLCMGMAASMGSFLLMAGAKGKRFALPNS 126
Query: 150 TIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPE 209
IMIHQPSGG GQA D+ IH ++I++ + LN +Y + TGQ++E IQ +M+RD++M P
Sbjct: 127 KIMIHQPSGGAQGQATDIEIHAREILKTREQLNKIYAERTGQTLEKIQADMERDFYMNPV 186
Query: 210 EAKEFGIIDEVIDQR 224
EA E+G+ID+V+++R
Sbjct: 187 EALEYGLIDKVLEKR 201
>gi|374575870|ref|ZP_09648966.1| protease subunit of ATP-dependent protease [Bradyrhizobium sp.
WSM471]
gi|374424191|gb|EHR03724.1| protease subunit of ATP-dependent protease [Bradyrhizobium sp.
WSM471]
Length = 211
Score = 263 bits (672), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 116/192 (60%), Positives = 155/192 (80%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E ++RGERAYDIFSRLLKERII + GP+ D + ++VAQLLFLE+ENP K I
Sbjct: 10 NLVPMVVEQTNRGERAYDIFSRLLKERIIFLTGPVEDGMSTLIVAQLLFLEAENPKKEIS 69
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
MY+NSPGG VT+GLAIYDTMQ+IR P++T+C GQAASMGSLLL +G K R +LPN+ IM
Sbjct: 70 MYINSPGGVVTSGLAIYDTMQFIRPPVSTLCTGQAASMGSLLLCAGEKDMRFSLPNARIM 129
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
+HQPSGG+ GQA D+ +H ++I+ + LN +Y KHTGQ+ + I+ ++RD F+T +AK
Sbjct: 130 VHQPSGGFQGQATDIMLHAQEILNLKKRLNEIYVKHTGQTYKAIEDALERDKFLTASDAK 189
Query: 213 EFGIIDEVIDQR 224
EFG++D VID+R
Sbjct: 190 EFGLVDRVIDKR 201
>gi|254476195|ref|ZP_05089581.1| Clp protease [Ruegeria sp. R11]
gi|214030438|gb|EEB71273.1| Clp protease [Ruegeria sp. R11]
Length = 202
Score = 263 bits (672), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 117/192 (60%), Positives = 156/192 (81%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E +SRGERAYDIFSRLLKERII +NGP++D + ++VAQLL LE+ENPSK I
Sbjct: 3 TLVPMVVEQTSRGERAYDIFSRLLKERIIFLNGPVHDGMSSLIVAQLLHLEAENPSKEIS 62
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
MY+NSPGG VT+GL+IYDTMQYI+ ++T+ +GQAASMGSLLL +G G R +LPNS +M
Sbjct: 63 MYINSPGGVVTSGLSIYDTMQYIKPKVSTLVIGQAASMGSLLLTAGEPGMRFSLPNSRVM 122
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
+HQPSGG+ GQA D+ IH ++ +++ LN +Y KHTGQ + I ++RD FM+PEEAK
Sbjct: 123 VHQPSGGFQGQATDIMIHAEETLKLKKRLNEIYVKHTGQDYDSIVNALERDNFMSPEEAK 182
Query: 213 EFGIIDEVIDQR 224
EFG+IDE+++ R
Sbjct: 183 EFGLIDEIVENR 194
>gi|260821306|ref|XP_002605974.1| hypothetical protein BRAFLDRAFT_92198 [Branchiostoma floridae]
gi|229291311|gb|EEN61984.1| hypothetical protein BRAFLDRAFT_92198 [Branchiostoma floridae]
Length = 236
Score = 263 bits (672), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 120/202 (59%), Positives = 160/202 (79%), Gaps = 1/202 (0%)
Query: 26 QISARSF-SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLES 84
Q SA++ ++P+V+E + RGERAYDI+SRLLKERIIC+ GPI+D+ + +VVAQLLFL+S
Sbjct: 25 QSSAQTLRPMVPIVVEQTGRGERAYDIYSRLLKERIICVMGPISDEMSSLVVAQLLFLQS 84
Query: 85 ENPSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERR 144
E+ KP+HMY+NSPGG VTAGL IYDTMQYI P+NT C+GQA SM SLLLA+GT G R
Sbjct: 85 ESNKKPVHMYINSPGGSVTAGLGIYDTMQYILPPVNTWCVGQACSMASLLLAAGTPGCRH 144
Query: 145 ALPNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDY 204
+LPNS IM+HQP G +GQA D+ I ++I ++ +N LY KHTGQ + VI+++MDRD
Sbjct: 145 SLPNSRIMVHQPHGQAAGQASDILIQAEEISKLKQQMNKLYVKHTGQELSVIEESMDRDR 204
Query: 205 FMTPEEAKEFGIIDEVIDQRPM 226
FM+P EA+ FG+ID+V++ P+
Sbjct: 205 FMSPVEAEAFGLIDKVLEHPPL 226
>gi|157803694|ref|YP_001492243.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia
canadensis str. McKiel]
gi|379022874|ref|YP_005299535.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia
canadensis str. CA410]
gi|166214705|sp|A8EYM5.1|CLPP_RICCK RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|157784957|gb|ABV73458.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia
canadensis str. McKiel]
gi|376323812|gb|AFB21053.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia
canadensis str. CA410]
Length = 201
Score = 263 bits (672), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 120/192 (62%), Positives = 153/192 (79%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
S +P+VIE +SRGERAYDI+SRLLKERII + + D A+++VAQLLFLE+ENP K I+
Sbjct: 2 SYVPIVIEQTSRGERAYDIYSRLLKERIIFVCSTVEDHMANLIVAQLLFLEAENPKKDIY 61
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
MY+NSPGG VTAGLAIYDTMQYI+ + T+C+GQA SMGS LL G KG R +LP+S IM
Sbjct: 62 MYINSPGGVVTAGLAIYDTMQYIKPKVATLCIGQACSMGSFLLCGGEKGMRYSLPHSRIM 121
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQPSGGY GQA D+ IH ++ +++ LN LY KHTGQ ++ I+K+M+RD FM+PEEAK
Sbjct: 122 IHQPSGGYQGQATDIEIHAQETLKIKRLLNELYSKHTGQDVKHIEKSMERDNFMSPEEAK 181
Query: 213 EFGIIDEVIDQR 224
+FGI+D +I R
Sbjct: 182 KFGIVDNIISSR 193
>gi|297569273|ref|YP_003690617.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfurivibrio alkaliphilus AHT2]
gi|296925188|gb|ADH85998.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfurivibrio alkaliphilus AHT2]
Length = 200
Score = 263 bits (672), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 120/192 (62%), Positives = 157/192 (81%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
SLIP VIE + RGER+YDI+SRLLKERII + +NDD A+V++AQ+LFLE+++P K I
Sbjct: 2 SLIPFVIEQTPRGERSYDIYSRLLKERIIFLGTGVNDDVANVIIAQMLFLEADDPDKDIT 61
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
Y+NSPGG VTAGLAIYDTM+YI+ + T+CLGQAASMG++LLA+GT+G+R ALPNS I+
Sbjct: 62 FYINSPGGVVTAGLAIYDTMRYIKCDVATLCLGQAASMGAVLLAAGTEGKRYALPNSRIL 121
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQP GGY GQA D+ IH K+I+R+ LN + HTGQSI+ IQK+ +RDYFM+ EE+K
Sbjct: 122 IHQPMGGYQGQASDIDIHAKEILRMRQDLNRILASHTGQSIKRIQKDTERDYFMSAEESK 181
Query: 213 EFGIIDEVIDQR 224
+GIID+V+ +R
Sbjct: 182 TYGIIDKVLYER 193
>gi|146341127|ref|YP_001206175.1| ATP-dependent Clp protease proteolytic subunit [Bradyrhizobium sp.
ORS 278]
gi|365881471|ref|ZP_09420780.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Bradyrhizobium sp. ORS 375]
gi|365891031|ref|ZP_09429504.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Bradyrhizobium sp. STM 3809]
gi|367473666|ref|ZP_09473214.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Bradyrhizobium sp. ORS 285]
gi|146193933|emb|CAL77950.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Bradyrhizobium sp. ORS 278]
gi|365274062|emb|CCD85682.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Bradyrhizobium sp. ORS 285]
gi|365290340|emb|CCD93311.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Bradyrhizobium sp. ORS 375]
gi|365333056|emb|CCE02035.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Bradyrhizobium sp. STM 3809]
Length = 210
Score = 263 bits (672), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 118/193 (61%), Positives = 155/193 (80%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E ++RGERAYDIFSRLLKERII + GP+ D A ++VAQLLFLE+ENP K I
Sbjct: 10 NLVPMVVEQTNRGERAYDIFSRLLKERIIFVTGPVEDGMATLIVAQLLFLEAENPKKEIA 69
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
MY+NSPGG VT+GLAIYDTMQ+IR ++T+C GQAASMGSLLL +G K R +LPNS IM
Sbjct: 70 MYINSPGGVVTSGLAIYDTMQFIRPAVSTLCTGQAASMGSLLLCAGHKDMRFSLPNSRIM 129
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
+HQPSGG+ GQA D+ +H ++I+ + LN +Y KHTGQ + I+ ++RD F+T E A+
Sbjct: 130 VHQPSGGFQGQATDIMLHAQEILSLKKRLNEIYVKHTGQPYKAIEDALERDKFLTAEAAQ 189
Query: 213 EFGIIDEVIDQRP 225
EFG+ID+V+D+RP
Sbjct: 190 EFGLIDKVLDKRP 202
>gi|257093849|ref|YP_003167490.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Candidatus
Accumulibacter phosphatis clade IIA str. UW-1]
gi|257046373|gb|ACV35561.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Candidatus
Accumulibacter phosphatis clade IIA str. UW-1]
Length = 209
Score = 263 bits (672), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 116/195 (59%), Positives = 157/195 (80%)
Query: 30 RSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSK 89
++ L+PMVIE S RGERAYDI+SRLLKER++ + GP+ND TA++VVAQLLFLE+ENP K
Sbjct: 12 QALGLVPMVIEQSGRGERAYDIYSRLLKERVVFLVGPVNDVTANLVVAQLLFLEAENPDK 71
Query: 90 PIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNS 149
IH Y+NSPGG V+AGL++YDTMQ+I+ ++T+C+GQA SMG+ LLA+GT+G+R ALPNS
Sbjct: 72 DIHFYINSPGGSVSAGLSVYDTMQFIKPDVSTLCMGQACSMGAFLLAAGTRGKRFALPNS 131
Query: 150 TIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPE 209
+MIHQP GG+ GQA D+ IH K+I+ + LN L HTGQ IE I+++ DRD F++ +
Sbjct: 132 RVMIHQPMGGFQGQASDIAIHAKEILSLRAKLNELMALHTGQEIERIERDTDRDNFLSAQ 191
Query: 210 EAKEFGIIDEVIDQR 224
EA E+G+ID+V+ R
Sbjct: 192 EAAEYGLIDKVLANR 206
>gi|114321437|ref|YP_743120.1| ATP-dependent Clp protease proteolytic subunit [Alkalilimnicola
ehrlichii MLHE-1]
gi|122311052|sp|Q0A6A7.1|CLPP_ALHEH RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|114227831|gb|ABI57630.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Alkalilimnicola ehrlichii MLHE-1]
Length = 214
Score = 263 bits (672), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 117/191 (61%), Positives = 154/191 (80%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
L+PMV+E S+RGERAYDI+SRLLKER+I + GP+ D A+++VAQLLFLESENP K IH+
Sbjct: 18 LVPMVVEQSARGERAYDIYSRLLKERVIFLVGPVEDHMANLIVAQLLFLESENPDKDIHI 77
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VTAGLAIYDTMQ+I+ ++T+C+GQAASMG+LLL GTKG+R ALPNS +MI
Sbjct: 78 YINSPGGAVTAGLAIYDTMQFIKPDVSTVCIGQAASMGALLLTGGTKGKRYALPNSRMMI 137
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQP GG+ GQA D+ IH ++I+ + D LN + HTGQ +E I ++ DRD FM+P+ A E
Sbjct: 138 HQPLGGFQGQATDVDIHAREILDMRDRLNRIMAHHTGQDMETIARDTDRDNFMSPDTACE 197
Query: 214 FGIIDEVIDQR 224
+G++D V+ R
Sbjct: 198 YGLVDAVLADR 208
>gi|402218814|gb|EJT98889.1| hypothetical protein DACRYDRAFT_24016 [Dacryopinax sp. DJM-731 SS1]
Length = 276
Score = 263 bits (672), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 122/198 (61%), Positives = 155/198 (78%), Gaps = 7/198 (3%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
L+P+VIE + RGER+YDI+SRLL+ER+I + GP+ D A V VAQLLFLE+E KPIH+
Sbjct: 45 LVPIVIEQTGRGERSYDIYSRLLRERVIMLAGPVTDTLASVTVAQLLFLEAEEAMKPIHL 104
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VTAG+AIYDTM+Y+ SPI T C+GQAASMGSLLLA+G KG+RRALPN+TIMI
Sbjct: 105 YINSPGGSVTAGMAIYDTMRYVTSPIYTYCMGQAASMGSLLLAAGEKGKRRALPNATIMI 164
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALY---CKHTGQS----IEVIQKNMDRDYFM 206
HQPSGG SG A D+ IH K+I+RV + L +Y C H G+S IE ++ ++RDYF+
Sbjct: 165 HQPSGGASGTASDVAIHAKEILRVRERLTKIYQKHCGHEGESVEDGIERFRRALERDYFL 224
Query: 207 TPEEAKEFGIIDEVIDQR 224
EEAK FGI+D V++ R
Sbjct: 225 DAEEAKAFGIVDSVLENR 242
>gi|169831635|ref|YP_001717617.1| ATP-dependent Clp protease proteolytic subunit [Candidatus
Desulforudis audaxviator MP104C]
gi|169638479|gb|ACA59985.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Candidatus
Desulforudis audaxviator MP104C]
Length = 198
Score = 263 bits (672), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 117/195 (60%), Positives = 158/195 (81%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+P+V+E ++RGERAYDI+SRLLK+RI+ I GPI D A++++AQLLFLE+E+P K IH
Sbjct: 3 TLVPIVVEQTARGERAYDIYSRLLKDRIVFIGGPIEDHVANLIIAQLLFLEAEDPDKDIH 62
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
+Y+NSPGG VT+G+AIYDTMQYIR ++TICLGQAAS G+ LLA+GT G+R ALP + IM
Sbjct: 63 LYINSPGGLVTSGMAIYDTMQYIRPDVSTICLGQAASFGAFLLAAGTPGKRFALPYARIM 122
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
+HQP GG GQA ++ IH ++I+R LN L KHTGQ +E I+++ +RD+FM+PE+A+
Sbjct: 123 MHQPLGGVQGQATEIDIHAREILRTKRVLNELLAKHTGQPVEKIERDTERDFFMSPEQAR 182
Query: 213 EFGIIDEVIDQRPMA 227
E+GIIDEVI R A
Sbjct: 183 EYGIIDEVITVRKKA 197
>gi|88607298|ref|YP_505537.1| ATP-dependent Clp protease proteolytic subunit [Anaplasma
phagocytophilum HZ]
gi|115311354|sp|Q2GJB4.1|CLPP_ANAPZ RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|88598361|gb|ABD43831.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Anaplasma
phagocytophilum HZ]
Length = 197
Score = 263 bits (672), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 118/193 (61%), Positives = 157/193 (81%)
Query: 32 FSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPI 91
+L+PMV+E + RGERAYDI+SRLLKERII + GPI D+ A ++VAQL+FLE+E+P K I
Sbjct: 1 MNLVPMVVEQTGRGERAYDIYSRLLKERIIFVTGPIEDEMASLIVAQLVFLEAEDPEKDI 60
Query: 92 HMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTI 151
MY+NSPGG VTAGL+IYDTMQYI+ + T+CLGQAASMGSLLL +G G R ALPNS +
Sbjct: 61 SMYINSPGGVVTAGLSIYDTMQYIKPNVATLCLGQAASMGSLLLCAGAPGMRCALPNSRV 120
Query: 152 MIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEA 211
MIHQPSGG+ GQA D+ IH ++I+ + LN ++ +HTG+S+E I+ +M+RD FM E+A
Sbjct: 121 MIHQPSGGFRGQATDIEIHAREILEIKRRLNEIFVRHTGKSLEEIESSMERDNFMIAEKA 180
Query: 212 KEFGIIDEVIDQR 224
++FGIID+VI++R
Sbjct: 181 RDFGIIDKVIEKR 193
>gi|330814219|ref|YP_004358458.1| ATP-dependent Clp protease proteolytic subunit [Candidatus
Pelagibacter sp. IMCC9063]
gi|327487314|gb|AEA81719.1| ATP-dependent Clp protease proteolytic subunit [Candidatus
Pelagibacter sp. IMCC9063]
Length = 204
Score = 263 bits (672), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 118/193 (61%), Positives = 154/193 (79%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E + RGERAYDI+SRLLKERII + GPIN + ++ AQLLFLESEN SK I
Sbjct: 11 TLVPMVVEQTPRGERAYDIYSRLLKERIIFLVGPINSQVSSLISAQLLFLESENNSKEIF 70
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
MY+NSPGG VT GLAIYDTMQYI+ + T+C+GQA SMGS LLA+G KG+R +LPNS +M
Sbjct: 71 MYINSPGGIVTDGLAIYDTMQYIKPAVATLCIGQACSMGSFLLAAGEKGQRMSLPNSRVM 130
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
+HQPS G+ GQA D+ IH +I++ LN +Y KHTGQS+E I++ ++RD FM+ EEAK
Sbjct: 131 VHQPSAGFQGQATDIEIHANEIMQTKKKLNEIYSKHTGQSVEKIKEALERDKFMSAEEAK 190
Query: 213 EFGIIDEVIDQRP 225
FG+ID+V+++RP
Sbjct: 191 AFGLIDKVVEKRP 203
>gi|170049615|ref|XP_001857723.1| ATP-dependent Clp protease proteolytic subunit [Culex
quinquefasciatus]
gi|167871378|gb|EDS34761.1| ATP-dependent Clp protease proteolytic subunit [Culex
quinquefasciatus]
Length = 225
Score = 263 bits (672), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 118/198 (59%), Positives = 153/198 (77%)
Query: 28 SARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENP 87
++R +L+P+V+E + RGERAYDIFSRLLKERIIC+ GPI+DD + ++VAQLLFL+SEN
Sbjct: 21 ASRLLNLVPIVVEQTGRGERAYDIFSRLLKERIICLMGPIHDDLSSLIVAQLLFLQSENG 80
Query: 88 SKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALP 147
+KPIHMY+NSPGG VTAGLAIYDTMQY++ P+ T C+GQA SMGSLLLA+G G R +LP
Sbjct: 81 TKPIHMYINSPGGSVTAGLAIYDTMQYVKPPVATWCVGQACSMGSLLLAAGAPGMRHSLP 140
Query: 148 NSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMT 207
N+ IMIHQPSGG GQA D+ I ++I+++ L +Y KHT E + M+RD F+
Sbjct: 141 NARIMIHQPSGGAQGQATDIQIQAEEILKLKKQLTEIYAKHTKSPYETLLAKMERDTFLN 200
Query: 208 PEEAKEFGIIDEVIDQRP 225
PEEA+ GIID V++ P
Sbjct: 201 PEEAQTLGIIDTVLEHPP 218
>gi|126733145|ref|ZP_01748892.1| Clp protease, putative [Roseobacter sp. CCS2]
gi|126716011|gb|EBA12875.1| Clp protease, putative [Roseobacter sp. CCS2]
Length = 206
Score = 263 bits (672), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 115/193 (59%), Positives = 157/193 (81%)
Query: 32 FSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPI 91
+L+PMV+E ++RGERAYDIFSRLLKERII +NGP++D + ++VAQLL LESENP K I
Sbjct: 9 MNLVPMVVEQTARGERAYDIFSRLLKERIIFVNGPVHDGMSQLIVAQLLHLESENPKKEI 68
Query: 92 HMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTI 151
MY+NSPGG VT+GL+IYDTMQYIR ++T+ +GQAASMGSLLL +G++G R +LPNS +
Sbjct: 69 SMYINSPGGVVTSGLSIYDTMQYIRPKVSTLVIGQAASMGSLLLTAGSEGMRFSLPNSRV 128
Query: 152 MIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEA 211
M+HQPSGGY GQA D+ IH + ++ LN +Y KHTG +++ ++ ++RD FM+PEEA
Sbjct: 129 MVHQPSGGYQGQATDIMIHAAETQKLKTRLNEIYVKHTGNTLKKVEAALERDNFMSPEEA 188
Query: 212 KEFGIIDEVIDQR 224
KE+G+IDE+++ R
Sbjct: 189 KEWGLIDEIVENR 201
>gi|121997404|ref|YP_001002191.1| ATP-dependent Clp protease proteolytic subunit [Halorhodospira
halophila SL1]
gi|226706517|sp|A1WUM7.1|CLPP_HALHL RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|121588809|gb|ABM61389.1| ATP-dependent Clp protease proteolytic subunit ClpP [Halorhodospira
halophila SL1]
Length = 210
Score = 263 bits (672), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 117/191 (61%), Positives = 153/191 (80%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
L+PMV+E S+RGERAYDIFSRLLKER+I + GP+ D A+++VAQLLFLESENP K +H+
Sbjct: 16 LVPMVVEQSARGERAYDIFSRLLKERVIFLVGPVEDYQANLLVAQLLFLESENPDKDVHL 75
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VTAGLAIYDTMQ+I+ + T+C+GQAASMG+LLLA+G +G+R ALPNS +MI
Sbjct: 76 YINSPGGSVTAGLAIYDTMQFIKPDVATLCVGQAASMGALLLAAGAEGKRHALPNSRMMI 135
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQP GG+ GQA D+ IH ++I+ + D LN + HTGQ IE I+++ DRD FM E A +
Sbjct: 136 HQPLGGFQGQATDIDIHAREILSMRDRLNTILAHHTGQDIETIRQDTDRDNFMAAEAAAQ 195
Query: 214 FGIIDEVIDQR 224
+G+ID V+ R
Sbjct: 196 YGLIDRVLTSR 206
>gi|56269518|gb|AAH87510.1| LOC496087 protein, partial [Xenopus laevis]
Length = 243
Score = 263 bits (672), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 122/192 (63%), Positives = 155/192 (80%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
LIP+V+E + RGERAYDI+SRLL+ERIIC+ GPI+D + VVVAQLLFL+SE+ KPIHM
Sbjct: 30 LIPIVVEQTGRGERAYDIYSRLLRERIICVMGPIDDSLSSVVVAQLLFLQSESNKKPIHM 89
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VTAGLAIYDTMQYI +PI T C+GQAASMGSLLLA+G+ G R +LPNS IMI
Sbjct: 90 YINSPGGSVTAGLAIYDTMQYILNPICTWCVGQAASMGSLLLAAGSSGMRHSLPNSRIMI 149
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQPSGG GQA D+ I ++I+++ +N +Y KHT Q + VI+ M+RD +M+P EA+E
Sbjct: 150 HQPSGGARGQATDIAIQAEEILKLKKQINEIYAKHTRQPLSVIESVMERDRYMSPTEAQE 209
Query: 214 FGIIDEVIDQRP 225
FGI+D+V+ P
Sbjct: 210 FGILDKVLVHPP 221
>gi|148223587|ref|NP_001088816.1| ClpP caseinolytic peptidase, ATP-dependent, proteolytic subunit
homolog [Xenopus laevis]
gi|76779451|gb|AAI06237.1| LOC496087 protein [Xenopus laevis]
Length = 247
Score = 263 bits (671), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 122/192 (63%), Positives = 155/192 (80%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
LIP+V+E + RGERAYDI+SRLL+ERIIC+ GPI+D + VVVAQLLFL+SE+ KPIHM
Sbjct: 34 LIPIVVEQTGRGERAYDIYSRLLRERIICVMGPIDDSLSSVVVAQLLFLQSESNKKPIHM 93
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VTAGLAIYDTMQYI +PI T C+GQAASMGSLLLA+G+ G R +LPNS IMI
Sbjct: 94 YINSPGGSVTAGLAIYDTMQYILNPICTWCVGQAASMGSLLLAAGSSGMRHSLPNSRIMI 153
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQPSGG GQA D+ I ++I+++ +N +Y KHT Q + VI+ M+RD +M+P EA+E
Sbjct: 154 HQPSGGARGQATDIAIQAEEILKLKKQINEIYAKHTRQPLSVIESVMERDRYMSPTEAQE 213
Query: 214 FGIIDEVIDQRP 225
FGI+D+V+ P
Sbjct: 214 FGILDKVLVHPP 225
>gi|383771490|ref|YP_005450555.1| ATP-dependent Clp protease proteolytic subunit [Bradyrhizobium sp.
S23321]
gi|381359613|dbj|BAL76443.1| ATP-dependent Clp protease proteolytic subunit [Bradyrhizobium sp.
S23321]
Length = 211
Score = 263 bits (671), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 116/192 (60%), Positives = 155/192 (80%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E ++RGERAYDIFSRLLKERII + GP+ D + ++VAQLLFLE+ENP K I
Sbjct: 10 NLVPMVVEQTNRGERAYDIFSRLLKERIIFLTGPVEDGMSTLIVAQLLFLEAENPKKEIS 69
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
MY+NSPGG VT+GLAIYDTMQ+IR P++T+C GQAASMGSLLL +G K R +LPN+ IM
Sbjct: 70 MYINSPGGVVTSGLAIYDTMQFIRPPVSTLCTGQAASMGSLLLCAGEKDMRFSLPNARIM 129
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
+HQPSGG+ GQA D+ +H ++I+ + LN +Y KHTGQ+ + I+ ++RD F+T +AK
Sbjct: 130 VHQPSGGFQGQATDIMLHAQEILNLKKRLNEIYVKHTGQTYKTIEDALERDKFLTANDAK 189
Query: 213 EFGIIDEVIDQR 224
EFG++D VID+R
Sbjct: 190 EFGLVDRVIDKR 201
>gi|418055593|ref|ZP_12693647.1| ATP-dependent Clp protease proteolytic subunit [Hyphomicrobium
denitrificans 1NES1]
gi|353209871|gb|EHB75273.1| ATP-dependent Clp protease proteolytic subunit [Hyphomicrobium
denitrificans 1NES1]
Length = 217
Score = 263 bits (671), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 119/198 (60%), Positives = 155/198 (78%)
Query: 27 ISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESEN 86
I+ + + PMV+E ++RGER YD+ SRLLKERII + GP+ D A + QLLFLESEN
Sbjct: 5 INTVTNTFWPMVVEQTTRGERGYDLPSRLLKERIIFVTGPVEDHMAASICMQLLFLESEN 64
Query: 87 PSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRAL 146
P K I MY+NSPGG VTAG+AIYDTMQ+++ P+ T+C+GQAASMGSLLL +G KG R AL
Sbjct: 65 PKKEISMYINSPGGVVTAGMAIYDTMQFVKPPVATLCIGQAASMGSLLLCAGEKGMRFAL 124
Query: 147 PNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFM 206
PN+ IM+HQPSGG+SGQA D+ H + I+++ LN Y KHTGQS EVI+K +DRDYFM
Sbjct: 125 PNARIMVHQPSGGFSGQASDIERHAEDIIKMKRRLNETYVKHTGQSYEVIEKTLDRDYFM 184
Query: 207 TPEEAKEFGIIDEVIDQR 224
T ++A++FGIID+V++ R
Sbjct: 185 TADQARDFGIIDKVLESR 202
>gi|254492068|ref|ZP_05105244.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Methylophaga
thiooxidans DMS010]
gi|224462732|gb|EEF79005.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Methylophaga
thiooxydans DMS010]
Length = 212
Score = 263 bits (671), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 117/205 (57%), Positives = 158/205 (77%), Gaps = 5/205 (2%)
Query: 26 QISARSFS-----LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLL 80
+ SA F+ L+P+V+E +SRGER+YDI+SRLLKER+I + GP+ D A+++VAQLL
Sbjct: 4 KFSAEEFTGIQNALVPIVVEQTSRGERSYDIYSRLLKERVIFLVGPVEDQMANLIVAQLL 63
Query: 81 FLESENPSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTK 140
FLESENP K IH+Y+NSPGG VTAG+AIYDTMQ+++ ++T+C+GQAASMG++LLA G +
Sbjct: 64 FLESENPDKDIHLYINSPGGAVTAGMAIYDTMQFVKPNVSTLCIGQAASMGAVLLAGGAE 123
Query: 141 GERRALPNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNM 200
G+R LPNS IM+HQP GG+ GQA D IH K+I+ + D LN + HTGQ IE I+++
Sbjct: 124 GKRHCLPNSRIMVHQPLGGFQGQASDFDIHAKEILSIRDRLNGILAHHTGQDIEAIRRDT 183
Query: 201 DRDYFMTPEEAKEFGIIDEVIDQRP 225
DRD FM E+A E+G+ID V+ RP
Sbjct: 184 DRDNFMNGEQALEYGLIDSVLTSRP 208
>gi|338999443|ref|ZP_08638086.1| ATP-dependent Clp protease proteolytic subunit [Halomonas sp. TD01]
gi|338763592|gb|EGP18581.1| ATP-dependent Clp protease proteolytic subunit [Halomonas sp. TD01]
Length = 205
Score = 263 bits (671), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 114/192 (59%), Positives = 155/192 (80%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
L+PMV+E S++GERAYDI+SRLLKER+I + GP+ D A++VVAQLLFLESENP K IH+
Sbjct: 12 LVPMVVEQSAKGERAYDIYSRLLKERVIFLVGPVEDYMANLVVAQLLFLESENPDKDIHL 71
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VTAG++IYDTMQ+I+ ++T+C+GQAASMG+LLL +G G+R LPNS +MI
Sbjct: 72 YINSPGGSVTAGMSIYDTMQFIKPDVSTVCIGQAASMGALLLTAGAAGKRYCLPNSRVMI 131
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQP GGY GQA D+ IHT++I+ + + LN + HTGQ +E + ++ DRD FM+ A+E
Sbjct: 132 HQPLGGYQGQASDIEIHTREILGIREKLNQILAHHTGQDLEAVARDTDRDNFMSATTAQE 191
Query: 214 FGIIDEVIDQRP 225
+G+ID V+D+RP
Sbjct: 192 YGLIDAVLDKRP 203
>gi|84499432|ref|ZP_00997720.1| Protease subunit of ATP-dependent Clp protease [Oceanicola
batsensis HTCC2597]
gi|84392576|gb|EAQ04787.1| Protease subunit of ATP-dependent Clp protease [Oceanicola
batsensis HTCC2597]
Length = 210
Score = 263 bits (671), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 120/200 (60%), Positives = 156/200 (78%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E +SRGERAYDIFSRLLKERII ++GP++D + ++VAQLL LE+ENP+K I
Sbjct: 11 NLVPMVVEQTSRGERAYDIFSRLLKERIIFVSGPVHDGMSSLIVAQLLHLEAENPTKDIS 70
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
MY+NSPGG VT+GL+IYDTMQYI+ + T+ +GQAASMGSLLLA G G R ALPN+ IM
Sbjct: 71 MYINSPGGVVTSGLSIYDTMQYIKPKVGTLVIGQAASMGSLLLAGGAAGMRYALPNAEIM 130
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
+HQPSGGY GQA D+ IH + ++ + LN +Y KHTGQ E + ++RD FMT EEAK
Sbjct: 131 VHQPSGGYRGQATDIMIHARHTEKLKERLNKIYVKHTGQDFETVVDALERDNFMTAEEAK 190
Query: 213 EFGIIDEVIDQRPMALVTDA 232
++G+IDE+ + RP A DA
Sbjct: 191 DWGLIDEIFESRPKADGDDA 210
>gi|86137328|ref|ZP_01055905.1| Protease subunit of ATP-dependent Clp protease [Roseobacter sp.
MED193]
gi|85825663|gb|EAQ45861.1| Protease subunit of ATP-dependent Clp protease [Roseobacter sp.
MED193]
Length = 202
Score = 263 bits (671), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 115/192 (59%), Positives = 156/192 (81%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E +SRGERAYDIFSRLLKERII +NGP++D + ++VAQLL LE+ENPSK I
Sbjct: 3 TLVPMVVEQTSRGERAYDIFSRLLKERIIFLNGPVHDGMSSLIVAQLLHLEAENPSKEIS 62
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
MY+NSPGG VT+GL+IYDTMQYI+ ++T+ +GQAASMGSLLL +G G R +LPNS +M
Sbjct: 63 MYINSPGGVVTSGLSIYDTMQYIKPKVSTLVIGQAASMGSLLLTAGEAGMRFSLPNSRVM 122
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
+HQPSGG+ GQA D+ IH ++ +++ LN +Y KHTGQ ++ ++ ++RD FM PEEAK
Sbjct: 123 VHQPSGGFQGQATDIMIHAEETLKLKRRLNEIYVKHTGQELDKVEAALERDNFMDPEEAK 182
Query: 213 EFGIIDEVIDQR 224
FG+IDE+++ R
Sbjct: 183 AFGLIDEIVENR 194
>gi|298292194|ref|YP_003694133.1| ATP-dependent Clp protease proteolytic subunit ClpP [Starkeya
novella DSM 506]
gi|296928705|gb|ADH89514.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Starkeya
novella DSM 506]
Length = 210
Score = 263 bits (671), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 115/192 (59%), Positives = 155/192 (80%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
L+PMV+E ++RGER+YDI+SRLLKERII + GP+ D+ A ++VAQLLFLE+ENP K I M
Sbjct: 12 LVPMVVEQTNRGERSYDIYSRLLKERIIFLTGPVEDNMATLMVAQLLFLEAENPKKEISM 71
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VT+GLAIYDTMQ+I+ ++T+C+GQAASMGSLLL +G KG R ALPN+ IM+
Sbjct: 72 YINSPGGVVTSGLAIYDTMQFIKPAVSTLCIGQAASMGSLLLTAGEKGMRFALPNARIMV 131
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQPSGG+ GQ D+ +H ++I+ + LN +Y KHTGQ ++ ++ ++RD FMT + AK
Sbjct: 132 HQPSGGFQGQVTDIMLHAQEILSLKKRLNEIYVKHTGQDLKAVEDALERDNFMTSDNAKS 191
Query: 214 FGIIDEVIDQRP 225
FG+ID VID+RP
Sbjct: 192 FGLIDNVIDKRP 203
>gi|432871395|ref|XP_004071942.1| PREDICTED: putative ATP-dependent Clp protease proteolytic subunit,
mitochondrial-like [Oryzias latipes]
Length = 265
Score = 263 bits (671), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 121/194 (62%), Positives = 157/194 (80%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
LIP+V+E + RGERAYDI+SRLL+ERIIC+ GPI+D A +V+AQLLFL+SE+ +KPIHM
Sbjct: 30 LIPIVVEQTGRGERAYDIYSRLLRERIICVMGPIDDTVASLVIAQLLFLQSESNNKPIHM 89
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VTAGLAIYDTMQYI +PI+T C+GQAASMGSLLLA+GT G R +LPN+ IM+
Sbjct: 90 YINSPGGVVTAGLAIYDTMQYILNPISTWCVGQAASMGSLLLAAGTSGMRHSLPNARIMV 149
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQPSGG GQA D+ I ++I+++ +N +Y KHT Q +E I+ M+RD +M+P EA++
Sbjct: 150 HQPSGGARGQATDIAIQAEEILKLKRQINTIYAKHTRQPLETIEGVMERDRYMSPMEAQD 209
Query: 214 FGIIDEVIDQRPMA 227
FGIID V+ P A
Sbjct: 210 FGIIDRVLVHPPQA 223
>gi|197117660|ref|YP_002138087.1| ATP-dependent Clp protease proteolytic subunit [Geobacter
bemidjiensis Bem]
gi|226706452|sp|B5EI27.1|CLPP_GEOBB RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|197087020|gb|ACH38291.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Geobacter
bemidjiensis Bem]
Length = 199
Score = 263 bits (671), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 115/188 (61%), Positives = 157/188 (83%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
L+P+V+E + RGER+YDI+SRLLK+RII + G I+D+ A++V+AQLLFLE+E+P K IH+
Sbjct: 2 LVPIVVEQTGRGERSYDIYSRLLKDRIIFLGGGIDDNVANLVIAQLLFLEAEDPDKDIHL 61
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VTAG+AIYDTM+YI++P++TIC+GQAASMG+ LL+ G KG+R +L NS IMI
Sbjct: 62 YINSPGGVVTAGMAIYDTMRYIKAPVSTICVGQAASMGAFLLSGGEKGKRYSLVNSRIMI 121
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQP GG+ GQA D+ IH K+I+R+ D LNAL +HTGQS+E + + +RDYFM+ EEAK
Sbjct: 122 HQPLGGFQGQATDIHIHAKEILRMKDQLNALLAEHTGQSVEKVAADTERDYFMSGEEAKN 181
Query: 214 FGIIDEVI 221
+GIID ++
Sbjct: 182 YGIIDAIV 189
>gi|312128165|ref|YP_003993039.1| ATP-dependent clp protease, proteolytic subunit clpp
[Caldicellulosiruptor hydrothermalis 108]
gi|312134617|ref|YP_004001955.1| ATP-dependent clp protease, proteolytic subunit clpp
[Caldicellulosiruptor owensensis OL]
gi|312792981|ref|YP_004025904.1| ATP-dependent clp protease, proteolytic subunit clpp
[Caldicellulosiruptor kristjanssonii 177R1B]
gi|344996808|ref|YP_004799151.1| ATP-dependent Clp protease proteolytic subunit
[Caldicellulosiruptor lactoaceticus 6A]
gi|311774668|gb|ADQ04155.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Caldicellulosiruptor owensensis OL]
gi|311778184|gb|ADQ07670.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Caldicellulosiruptor hydrothermalis 108]
gi|312180121|gb|ADQ40291.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Caldicellulosiruptor kristjanssonii 177R1B]
gi|343965027|gb|AEM74174.1| ATP-dependent Clp protease proteolytic subunit
[Caldicellulosiruptor lactoaceticus 6A]
Length = 195
Score = 263 bits (671), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 117/193 (60%), Positives = 159/193 (82%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+P+VIE ++RGERAYDI+SRLLK+RI+ ++G I DD A ++VAQLLFLE+E+P K I+
Sbjct: 3 ALVPIVIEQTNRGERAYDIYSRLLKDRIVILSGEITDDIASLIVAQLLFLEAEDPDKDIY 62
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
+Y+NSPGG VTAG AIYDTMQYI+ ++TIC+G AASMG+ LLA+G KG+R ALPNS IM
Sbjct: 63 LYINSPGGSVTAGFAIYDTMQYIKPDVSTICVGMAASMGAFLLAAGAKGKRFALPNSEIM 122
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQP GG GQA D+ IH + I+++ + +N + + TGQ IEVI+++ DRD+FMT EEA
Sbjct: 123 IHQPLGGVRGQATDIKIHAEWILKIKNRINKILSERTGQPIEVIERDTDRDFFMTAEEAL 182
Query: 213 EFGIIDEVIDQRP 225
++GIID+VI++RP
Sbjct: 183 KYGIIDKVIERRP 195
>gi|393247505|gb|EJD55012.1| hypothetical protein AURDEDRAFT_77891 [Auricularia delicata
TFB-10046 SS5]
Length = 257
Score = 263 bits (671), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 121/209 (57%), Positives = 162/209 (77%), Gaps = 7/209 (3%)
Query: 24 SAQISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLE 83
S++I+ +L+P+VIE + RGER+YDIFSRLL+ER++ +NG I+D A ++VAQLLFLE
Sbjct: 32 SSRITDFKSALVPIVIEQTGRGERSYDIFSRLLRERVVMLNGGIDDAEASLIVAQLLFLE 91
Query: 84 SENPSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGER 143
+E SKPIH+Y+NSPGG VTAG+AIYDTMQYI +P++T C+GQAASMGSLLLA+G G+R
Sbjct: 92 AEESSKPIHLYINSPGGLVTAGMAIYDTMQYISAPVHTYCIGQAASMGSLLLAAGAPGKR 151
Query: 144 RALPNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQ-------SIEVI 196
LPN+ IMIHQPSGG SGQA D+ IH K+I+RV DAL LY H + ++E
Sbjct: 152 HTLPNARIMIHQPSGGASGQASDIAIHAKEILRVRDALTRLYQNHCARPGEDDEPAVERF 211
Query: 197 QKNMDRDYFMTPEEAKEFGIIDEVIDQRP 225
+ ++RDYFMT EA EFG++D ++++RP
Sbjct: 212 RLALERDYFMTAPEALEFGLVDSILERRP 240
>gi|384083495|ref|ZP_09994670.1| ATP-dependent Clp protease, proteolytic subunitclpp [gamma
proteobacterium HIMB30]
Length = 201
Score = 262 bits (670), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 117/191 (61%), Positives = 155/191 (81%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
L+P+V+E SSRGER+YDI+SRLLKER+I + G + D A+++VAQLLFLESENP K IH+
Sbjct: 4 LVPIVVEQSSRGERSYDIYSRLLKERVIFMVGQVEDHMANLIVAQLLFLESENPDKDIHL 63
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VTAG+AIYDTMQ+I+ ++T+C+GQAASMG+ LLA G KG+R ALPNS +MI
Sbjct: 64 YINSPGGSVTAGMAIYDTMQFIKPDVSTLCIGQAASMGAFLLAGGAKGKRFALPNSRMMI 123
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQP GGYSGQA D+ IH K+I+++ + LN+ HTGQ+I+ I K+ DRD FM EAK
Sbjct: 124 HQPLGGYSGQASDIDIHAKEILKIREKLNSKLAHHTGQTIKQIAKDTDRDRFMDAAEAKS 183
Query: 214 FGIIDEVIDQR 224
+G+ID+V++ R
Sbjct: 184 YGLIDDVLEHR 194
>gi|237755491|ref|ZP_04584113.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Sulfurihydrogenibium yellowstonense SS-5]
gi|237692355|gb|EEP61341.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Sulfurihydrogenibium yellowstonense SS-5]
Length = 201
Score = 262 bits (670), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 122/191 (63%), Positives = 155/191 (81%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
LIP+VIE + RGERAYDI+SRLLK+RII + PI+D A++VVAQLLFLESE+P K I+M
Sbjct: 8 LIPIVIEQTPRGERAYDIYSRLLKDRIILLGTPIDDHIANLVVAQLLFLESEDPDKDIYM 67
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VTAGLAIYDTM YI+ + TIC+GQAASMG+ LL++G KG+R +LPN+ IMI
Sbjct: 68 YINSPGGVVTAGLAIYDTMNYIKPDVVTICMGQAASMGAFLLSAGAKGKRYSLPNARIMI 127
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQP GG+ GQA D+ IH K+I+R+ LN KHTGQ IE I+ + +RDYFM+ EEAKE
Sbjct: 128 HQPLGGFQGQATDIEIHAKEILRLKRMLNEYLAKHTGQPIEKIEADTERDYFMSAEEAKE 187
Query: 214 FGIIDEVIDQR 224
+G+ID+VI +R
Sbjct: 188 YGLIDKVIYKR 198
>gi|433775722|ref|YP_007306189.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Mesorhizobium
australicum WSM2073]
gi|433667737|gb|AGB46813.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Mesorhizobium
australicum WSM2073]
Length = 209
Score = 262 bits (670), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 119/195 (61%), Positives = 156/195 (80%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E ++RGERAYDIFSRLLKERII I GP+ D A +V AQLLFLE+ENP K I+
Sbjct: 10 NLVPMVVEQTNRGERAYDIFSRLLKERIIFITGPVEDGMATLVCAQLLFLEAENPKKEIN 69
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
+Y+NSPGG VT+G+AIYDTMQ+I+ ++T+C+GQAASMGSLLL +G K R A PN+ IM
Sbjct: 70 LYINSPGGVVTSGMAIYDTMQFIKPAVSTLCIGQAASMGSLLLTAGHKDMRFATPNARIM 129
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
+HQPSGG+ GQA D+ H + I+++ LN +Y KHTG+S E I+K +DRD+FMT +EAK
Sbjct: 130 VHQPSGGFQGQASDIERHAQDIIKLKRRLNEVYVKHTGKSYEDIEKTLDRDHFMTADEAK 189
Query: 213 EFGIIDEVIDQRPMA 227
+FG+ID+VI R A
Sbjct: 190 DFGLIDKVISSREAA 204
>gi|149376712|ref|ZP_01894470.1| ATP-dependent Clp protease proteolytic subunit [Marinobacter
algicola DG893]
gi|149358951|gb|EDM47417.1| ATP-dependent Clp protease proteolytic subunit [Marinobacter
algicola DG893]
Length = 227
Score = 262 bits (670), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 112/191 (58%), Positives = 156/191 (81%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
L+P+VIE ++RGER++DIFSRLLKER+I + GP+ D A+++VAQLLFLESENP K IH+
Sbjct: 33 LVPIVIEQTARGERSFDIFSRLLKERVIFLVGPVEDHMANLIVAQLLFLESENPDKDIHL 92
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VTAG++IYDTMQ+I+ + T+C+GQAASMG+ LLA G +G+R LPNS +MI
Sbjct: 93 YINSPGGSVTAGMSIYDTMQFIKPDVATLCVGQAASMGAFLLAGGAEGKRACLPNSRVMI 152
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQP GGY GQA D+ IHT++I+++ LN++ HTGQ ++ I K+ DRD FM P++AK+
Sbjct: 153 HQPLGGYQGQATDIEIHTREILKIRHTLNSILAHHTGQKLDTIAKDTDRDNFMDPQQAKD 212
Query: 214 FGIIDEVIDQR 224
+G+ID ++D+R
Sbjct: 213 YGLIDSILDKR 223
>gi|260427575|ref|ZP_05781554.1| Clp protease [Citreicella sp. SE45]
gi|260422067|gb|EEX15318.1| Clp protease [Citreicella sp. SE45]
Length = 210
Score = 262 bits (670), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 116/195 (59%), Positives = 160/195 (82%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E +SRGERAYDIFSRLLKERII ++GP++D + ++VAQLL LE+ENP+K I
Sbjct: 11 TLVPMVVEQTSRGERAYDIFSRLLKERIIFVSGPVHDGMSSLIVAQLLHLEAENPAKEIS 70
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
MY+NSPGG VT+GL+IYDTMQYI+ I+T+ +GQAASMGSLLL +G G R +LPNS IM
Sbjct: 71 MYINSPGGVVTSGLSIYDTMQYIKPKISTLVIGQAASMGSLLLTAGEAGMRFSLPNSRIM 130
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
+HQPSGGY GQA D+ IH ++ +++ LN +Y +HTGQ++E ++ ++RD FM+PE+AK
Sbjct: 131 VHQPSGGYQGQATDIMIHAEETLKLKRRLNEIYVRHTGQTLEKVEAALERDNFMSPEDAK 190
Query: 213 EFGIIDEVIDQRPMA 227
E+G+IDE+++ R A
Sbjct: 191 EWGLIDEIVESRGAA 205
>gi|220934115|ref|YP_002513014.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thioalkalivibrio sulfidophilus HL-EbGr7]
gi|219995425|gb|ACL72027.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thioalkalivibrio sulfidophilus HL-EbGr7]
Length = 216
Score = 262 bits (670), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 117/201 (58%), Positives = 159/201 (79%)
Query: 27 ISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESEN 86
+ R+ +L+PMV+E ++RGERAYDI+SRLLKER+I GP+ D A+V+VAQLLFLESEN
Sbjct: 12 LDTRALNLVPMVVEQTARGERAYDIYSRLLKERVIFAVGPVEDYMANVIVAQLLFLESEN 71
Query: 87 PSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRAL 146
P K I +Y+NSPGG VTAG+AIYDTMQ+I+ ++T+C+GQAASMG++LLA G KG+R L
Sbjct: 72 PDKDISLYINSPGGAVTAGMAIYDTMQFIKPDVSTLCIGQAASMGAVLLAGGAKGKRFCL 131
Query: 147 PNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFM 206
P+S +MIHQP GG+ GQA D+ IH ++I++V LN + HTGQSIE I+++ +RD F+
Sbjct: 132 PHSRVMIHQPLGGFQGQATDIDIHAREILKVRAELNRILAHHTGQSIEQIEQDTERDRFL 191
Query: 207 TPEEAKEFGIIDEVIDQRPMA 227
P EA E+G+ID+V+ R MA
Sbjct: 192 NPVEAAEYGLIDQVLSSREMA 212
>gi|340777394|ref|ZP_08697337.1| ATP-dependent Clp protease proteolytic subunit [Acetobacter aceti
NBRC 14818]
Length = 212
Score = 262 bits (670), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 116/193 (60%), Positives = 157/193 (81%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E +SRGERA+DI+SRLL+ERII + GP+ D A V+ AQLL+LES NP+K I
Sbjct: 13 ALVPMVVEQTSRGERAFDIYSRLLQERIIFLTGPVYDQVASVISAQLLYLESVNPNKEIS 72
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
Y+NSPGG V+AGLAIYDTMQYIRSP++T+C+GQAASMGSLLLA G +G+R ALPN+ +M
Sbjct: 73 FYINSPGGVVSAGLAIYDTMQYIRSPVSTVCIGQAASMGSLLLAGGAEGKRFALPNARVM 132
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
+HQPSGG GQA D+ I ++I+ + LN +Y +HTGQ++E I++ ++RD +M+ +EAK
Sbjct: 133 VHQPSGGAQGQASDIEIQAREILTIRQRLNEIYREHTGQTLEDIEQKLERDSYMSADEAK 192
Query: 213 EFGIIDEVIDQRP 225
FGI+DEVI + P
Sbjct: 193 AFGIVDEVIKKHP 205
>gi|170751514|ref|YP_001757774.1| ATP-dependent Clp protease proteolytic subunit [Methylobacterium
radiotolerans JCM 2831]
gi|226706463|sp|B1LW28.1|CLPP_METRJ RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|170658036|gb|ACB27091.1| Endopeptidase Clp [Methylobacterium radiotolerans JCM 2831]
Length = 208
Score = 262 bits (670), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 118/193 (61%), Positives = 153/193 (79%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E SSRGERA+DI+SRLL+ERII + GP+ D A ++VAQLLFLE+ENP K I
Sbjct: 11 ALVPMVVEQSSRGERAFDIYSRLLRERIIFLTGPVEDYGASLIVAQLLFLEAENPKKEIS 70
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
Y+NSPGG VT+GL+IYDTMQ+IR P+ T+C+GQAASMGSLLL +G G R ALPN+ IM
Sbjct: 71 FYINSPGGVVTSGLSIYDTMQFIRCPVTTLCVGQAASMGSLLLTAGEPGHRFALPNARIM 130
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
+HQPSGG+ GQA D+ IH ++I + LN +Y KHTG+ + I ++RD FMT + AK
Sbjct: 131 VHQPSGGFQGQATDILIHAREIEALKRRLNEIYVKHTGRDYDTIHTALERDNFMTADAAK 190
Query: 213 EFGIIDEVIDQRP 225
EFG+IDEVI++RP
Sbjct: 191 EFGLIDEVIEKRP 203
>gi|71907348|ref|YP_284935.1| ATP-dependent Clp protease proteolytic subunit [Dechloromonas
aromatica RCB]
gi|110816458|sp|Q47FB6.1|CLPP_DECAR RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|71846969|gb|AAZ46465.1| ATP-dependent Clp protease proteolytic subunit ClpP [Dechloromonas
aromatica RCB]
Length = 209
Score = 262 bits (670), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 116/198 (58%), Positives = 159/198 (80%)
Query: 30 RSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSK 89
++ L+PMV+E S RGERAYDI+SRLLKER+I + GP+ND TA++VVAQLLFLE+ENP K
Sbjct: 12 QALGLVPMVVEQSGRGERAYDIYSRLLKERVIFLVGPVNDVTANLVVAQLLFLEAENPDK 71
Query: 90 PIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNS 149
I+ Y+NSPGG VTAG++IYDTMQ+I+ ++T+C+GQAASMG+ LL +G KG+R ALPNS
Sbjct: 72 DIYFYINSPGGSVTAGMSIYDTMQFIKPDVSTLCIGQAASMGAFLLNAGAKGKRFALPNS 131
Query: 150 TIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPE 209
+MIHQP GG+ GQA D+ IH K+I+ + D LN + +H+GQ +E I+K+ DRD F++
Sbjct: 132 RVMIHQPLGGFQGQASDIAIHAKEILSIRDRLNRIMAEHSGQPLERIEKDTDRDNFLSAA 191
Query: 210 EAKEFGIIDEVIDQRPMA 227
EA E+G+ID+V+ +R A
Sbjct: 192 EAAEYGLIDKVLTRRDAA 209
>gi|399545473|ref|YP_006558781.1| ATP-dependent Clp protease proteolytic subunit [Marinobacter sp.
BSs20148]
gi|399160805|gb|AFP31368.1| ATP-dependent Clp protease proteolytic subunit [Marinobacter sp.
BSs20148]
Length = 211
Score = 262 bits (670), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 115/194 (59%), Positives = 155/194 (79%)
Query: 31 SFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKP 90
S +L+PMVIE ++RGER++DIFSRLLKER+I + GP+ D A++VVAQLLFLESENP K
Sbjct: 14 SAALVPMVIEQTARGERSFDIFSRLLKERVIFMVGPVEDQMANLVVAQLLFLESENPDKD 73
Query: 91 IHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNST 150
IH+Y+NSPGG V+AG++IYDTMQ+I+ + T+C+GQAASMG+ LLA G G+R LPNS
Sbjct: 74 IHLYINSPGGSVSAGMSIYDTMQFIKPDVATLCVGQAASMGAFLLAGGAAGKRACLPNSR 133
Query: 151 IMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEE 210
+MIHQP GGY GQA D+ IHT++I+++ LN++ HTGQ +E I ++ DRD FM P +
Sbjct: 134 VMIHQPLGGYQGQATDIEIHTREILKIRHTLNSILAHHTGQDLETISRDTDRDNFMDPIQ 193
Query: 211 AKEFGIIDEVIDQR 224
AK +G+ID V+D+R
Sbjct: 194 AKAYGLIDSVLDKR 207
>gi|255261268|ref|ZP_05340610.1| Clp protease [Thalassiobium sp. R2A62]
gi|255103603|gb|EET46277.1| Clp protease [Thalassiobium sp. R2A62]
Length = 209
Score = 262 bits (670), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 114/193 (59%), Positives = 159/193 (82%)
Query: 32 FSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPI 91
+L+PMV+E +SRGERAYDIFSRLLKERII +NGP++D + ++VAQLL LE+ENPSK I
Sbjct: 9 MNLVPMVVEQTSRGERAYDIFSRLLKERIIFLNGPVHDGMSQLIVAQLLHLEAENPSKEI 68
Query: 92 HMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTI 151
MY+NSPGG VT+GL+IYDTMQYI+ ++T+ +GQAASMGSLLL +G KG R +LPNS +
Sbjct: 69 SMYINSPGGVVTSGLSIYDTMQYIKPKVSTLVIGQAASMGSLLLTAGEKGMRFSLPNSRV 128
Query: 152 MIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEA 211
M+HQPSGGY GQA D+ IH + ++ D LN++Y +HTGQ+++ ++ ++RD FM+ E+A
Sbjct: 129 MVHQPSGGYQGQATDIMIHAAETQKLKDRLNSIYVRHTGQTLKKVEAALERDNFMSAEDA 188
Query: 212 KEFGIIDEVIDQR 224
K++G+IDE+++ R
Sbjct: 189 KDWGLIDEIVENR 201
>gi|402819275|ref|ZP_10868844.1| ATP-dependent Clp protease proteolytic subunit ClpP [alpha
proteobacterium IMCC14465]
gi|402511979|gb|EJW22239.1| ATP-dependent Clp protease proteolytic subunit ClpP [alpha
proteobacterium IMCC14465]
Length = 209
Score = 262 bits (670), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 115/192 (59%), Positives = 153/192 (79%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+++PMV+E ++RGERAYDI+SRLLKER+I + G I D A ++ AQLLFLE+ENP K I
Sbjct: 11 TMVPMVVEQTNRGERAYDIYSRLLKERVIFVTGAIEDYMASLITAQLLFLEAENPKKEIS 70
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
MY+NSPGG VT+G+AIYDTMQYIR P++T+C+GQAASMGSLLL +G + R ALPN+ IM
Sbjct: 71 MYINSPGGVVTSGMAIYDTMQYIRPPVSTLCIGQAASMGSLLLCAGEENMRFALPNARIM 130
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
+HQPSGG+ GQA D+ H K+I+ + LN +YC HTGQ ++ I+ ++RD FMT +EAK
Sbjct: 131 VHQPSGGFQGQASDIERHAKEILDMRTRLNKIYCTHTGQDLKTIEDALERDTFMTADEAK 190
Query: 213 EFGIIDEVIDQR 224
FG+ID V+D+R
Sbjct: 191 NFGLIDTVVDKR 202
>gi|347758142|ref|YP_004865704.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Micavibrio
aeruginosavorus ARL-13]
gi|347590660|gb|AEP09702.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Micavibrio
aeruginosavorus ARL-13]
Length = 216
Score = 262 bits (669), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 118/199 (59%), Positives = 158/199 (79%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMVIE ++RGER++DI+SRLLKERII + G + D + ++ AQLLFLESENP K I
Sbjct: 14 TLVPMVIEQTARGERSFDIYSRLLKERIIFLTGEVEDHGSALICAQLLFLESENPKKEIS 73
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
Y+NSPGG VT+GLA+YDTMQYI+ P+ T+C+GQAASMGSLLL +G G+R +LPNS IM
Sbjct: 74 FYINSPGGVVTSGLAMYDTMQYIKCPVATVCIGQAASMGSLLLTAGEAGKRFSLPNSRIM 133
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQPSGG GQA D+ IH ++I+R+ + LN +Y KHTG+ + I+ +M+RD FM+ +EAK
Sbjct: 134 IHQPSGGARGQATDIEIHAREILRLRERLNQIYVKHTGRKLNEIEVSMERDNFMSADEAK 193
Query: 213 EFGIIDEVIDQRPMALVTD 231
FG+ID V++ RP AL T+
Sbjct: 194 AFGLIDHVVETRPKALETE 212
>gi|15888588|ref|NP_354269.1| ATP-dependent Clp protease, proteolytic subunit [Agrobacterium
fabrum str. C58]
gi|21759066|sp|Q8UFY6.1|CLPP2_AGRT5 RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|15156306|gb|AAK87054.1| ATP-dependent Clp protease, proteolytic subunit [Agrobacterium
fabrum str. C58]
Length = 210
Score = 262 bits (669), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 114/194 (58%), Positives = 157/194 (80%)
Query: 31 SFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKP 90
+ +L+PMV+E ++RGER+YDIFSRLLKERII + GP+ D A +V AQLLFLE+ENP K
Sbjct: 8 AMALVPMVVEQTNRGERSYDIFSRLLKERIIFLTGPVEDQMASLVCAQLLFLEAENPKKE 67
Query: 91 IHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNST 150
I +Y+NSPGG VTAG+AIYDTMQ+IR ++T+C+GQAASMGSLLLA+G KG R A PN+
Sbjct: 68 IALYINSPGGVVTAGMAIYDTMQFIRPAVSTLCVGQAASMGSLLLAAGEKGMRFATPNAR 127
Query: 151 IMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEE 210
IM+HQPSGG+ GQA D+ H + I+++ LN +Y KHTG+++E ++K +DRD+FM +E
Sbjct: 128 IMVHQPSGGFQGQASDIERHARDIIKMKRRLNEVYVKHTGRTLEEVEKTLDRDHFMDADE 187
Query: 211 AKEFGIIDEVIDQR 224
AK++G+ID+++ R
Sbjct: 188 AKDWGVIDKILTSR 201
>gi|222528715|ref|YP_002572597.1| ATP-dependent Clp protease proteolytic subunit
[Caldicellulosiruptor bescii DSM 6725]
gi|312622971|ref|YP_004024584.1| ATP-dependent clp protease, proteolytic subunit clpp
[Caldicellulosiruptor kronotskyensis 2002]
gi|222455562|gb|ACM59824.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Caldicellulosiruptor bescii DSM 6725]
gi|312203438|gb|ADQ46765.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Caldicellulosiruptor kronotskyensis 2002]
Length = 195
Score = 262 bits (669), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 117/193 (60%), Positives = 159/193 (82%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+P+VIE ++RGERAYDI+SRLLK+RI+ ++G I DD A ++VAQLLFLE+E+P K I+
Sbjct: 3 ALVPIVIEQTNRGERAYDIYSRLLKDRIVILSGEITDDIASLIVAQLLFLEAEDPDKDIY 62
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
+Y+NSPGG VTAG AIYDTMQYI+ ++TIC+G AASMG+ LLA+G KG+R ALPNS IM
Sbjct: 63 LYINSPGGSVTAGFAIYDTMQYIKPDVSTICVGLAASMGAFLLAAGAKGKRFALPNSEIM 122
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQP GG GQA D+ IH + I+++ + +N + + TGQ IEVI+++ DRD+FMT EEA
Sbjct: 123 IHQPLGGVRGQATDIKIHAEWILKIKNRINKILSERTGQPIEVIERDTDRDFFMTAEEAL 182
Query: 213 EFGIIDEVIDQRP 225
++GIID+VI++RP
Sbjct: 183 KYGIIDKVIERRP 195
>gi|400754134|ref|YP_006562502.1| ATP-dependent Clp protease proteolytic subunit [Phaeobacter
gallaeciensis 2.10]
gi|398653287|gb|AFO87257.1| ATP-dependent Clp protease proteolytic subunit [Phaeobacter
gallaeciensis 2.10]
Length = 210
Score = 262 bits (669), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 116/192 (60%), Positives = 156/192 (81%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E +SRGERAYDIFSRLLKERII +NGP++D + ++VAQLL LE+ENPSK I
Sbjct: 11 TLVPMVVEQTSRGERAYDIFSRLLKERIIFLNGPVHDGMSSLIVAQLLHLEAENPSKEIS 70
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
MY+NSPGG VT+GL+IYDTMQYI+ ++T+ +GQAASMGSLLL +G G R +LPNS +M
Sbjct: 71 MYINSPGGVVTSGLSIYDTMQYIKPKVSTLVIGQAASMGSLLLTAGEAGMRFSLPNSRVM 130
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
+HQPSGG+ GQA D+ IH ++ +++ LN +Y KHTGQ + I ++RD FM+PEEAK
Sbjct: 131 VHQPSGGFQGQATDIMIHAEETLKLKKRLNEIYVKHTGQEYDKIVDALERDNFMSPEEAK 190
Query: 213 EFGIIDEVIDQR 224
+FG+IDE+++ R
Sbjct: 191 DFGLIDEIVENR 202
>gi|302871325|ref|YP_003839961.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Caldicellulosiruptor obsidiansis OB47]
gi|302574184|gb|ADL41975.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Caldicellulosiruptor obsidiansis OB47]
Length = 195
Score = 262 bits (669), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 117/193 (60%), Positives = 158/193 (81%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+P+VIE ++RGERAYDI+SRLLK+RI+ ++G I DD A ++VAQLLFLE+E+P K I+
Sbjct: 3 ALVPIVIEQTNRGERAYDIYSRLLKDRIVILSGEITDDIASLIVAQLLFLEAEDPDKDIY 62
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
+Y+NSPGG VTAG AIYDTMQYI+ ++TIC+G AASMG+ LLA+G KG+R ALPNS IM
Sbjct: 63 LYINSPGGSVTAGFAIYDTMQYIKPDVSTICVGMAASMGAFLLAAGAKGKRFALPNSEIM 122
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQP GG GQA D+ IH + I+++ + +N + + TGQ IEVI+++ DRD+FMT EEA
Sbjct: 123 IHQPLGGVRGQATDIKIHAEWILKIKNRINKILSERTGQPIEVIERDTDRDFFMTAEEAL 182
Query: 213 EFGIIDEVIDQRP 225
++GIID VI++RP
Sbjct: 183 KYGIIDRVIERRP 195
>gi|325292625|ref|YP_004278489.1| ATP-dependent Clp protease, proteolytic subunit [Agrobacterium sp.
H13-3]
gi|335035107|ref|ZP_08528450.1| ATP-dependent Clp protease proteolytic subunit [Agrobacterium sp.
ATCC 31749]
gi|417860288|ref|ZP_12505344.1| ATP-dependent Clp protease proteolytic subunit [Agrobacterium
tumefaciens F2]
gi|418406778|ref|ZP_12980097.1| ATP-dependent Clp protease proteolytic subunit [Agrobacterium
tumefaciens 5A]
gi|325060478|gb|ADY64169.1| ATP-dependent Clp protease, proteolytic subunit [Agrobacterium sp.
H13-3]
gi|333793538|gb|EGL64892.1| ATP-dependent Clp protease proteolytic subunit [Agrobacterium sp.
ATCC 31749]
gi|338823352|gb|EGP57320.1| ATP-dependent Clp protease proteolytic subunit [Agrobacterium
tumefaciens F2]
gi|358007271|gb|EHJ99594.1| ATP-dependent Clp protease proteolytic subunit [Agrobacterium
tumefaciens 5A]
Length = 210
Score = 262 bits (669), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 114/194 (58%), Positives = 157/194 (80%)
Query: 31 SFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKP 90
+ +L+PMV+E ++RGER+YDIFSRLLKERII + GP+ D A +V AQLLFLE+ENP K
Sbjct: 8 AMALVPMVVEQTNRGERSYDIFSRLLKERIIFLTGPVEDQMASLVCAQLLFLEAENPKKE 67
Query: 91 IHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNST 150
I +Y+NSPGG VTAG+AIYDTMQ+IR ++T+C+GQAASMGSLLLA+G KG R A PN+
Sbjct: 68 IALYINSPGGVVTAGMAIYDTMQFIRPAVSTLCVGQAASMGSLLLAAGEKGMRFATPNAR 127
Query: 151 IMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEE 210
IM+HQPSGG+ GQA D+ H + I+++ LN +Y KHTG+++E ++K +DRD+FM +E
Sbjct: 128 IMVHQPSGGFQGQASDIERHARDIIKMKRRLNEVYVKHTGRTLEEVEKTLDRDHFMDADE 187
Query: 211 AKEFGIIDEVIDQR 224
AK++G+ID+++ R
Sbjct: 188 AKDWGVIDKILTSR 201
>gi|196010065|ref|XP_002114897.1| expressed hypothetical protein [Trichoplax adhaerens]
gi|190582280|gb|EDV22353.1| expressed hypothetical protein [Trichoplax adhaerens]
Length = 226
Score = 262 bits (669), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 128/226 (56%), Positives = 166/226 (73%), Gaps = 7/226 (3%)
Query: 3 SMRNLLSRTSMATKFLQLSKPSAQISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIIC 62
S R L S S+A + L + P R L+P+VIE + RGE+AYDI+SRLLK+RI+C
Sbjct: 2 SFRTLKSILSIANRTLHTTGP------RISPLVPIVIEKTGRGEQAYDIYSRLLKDRIVC 55
Query: 63 INGPINDDTAHVVVAQLLFLESENPSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTI 122
+ GP+ DD A +VVAQLLFL++E+ PIHMY+NSPGG VT+GL IYDTMQY+ PI T
Sbjct: 56 VMGPVTDDLASLVVAQLLFLQAESSKLPIHMYINSPGGSVTSGLGIYDTMQYVEPPIYTW 115
Query: 123 CLGQAASMGSLLLASGTKGERRALPNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALN 182
C+GQAASMGSLLLA+G G+R +LPNS IMIHQPSG GQA D+ I ++I+++ +N
Sbjct: 116 CVGQAASMGSLLLAAGDNGKRHSLPNSRIMIHQPSGQAFGQATDIAIQAEEIIKLKKLIN 175
Query: 183 ALYCKHTGQSIEVIQKNMDRDYFMTPEEAKEFGIIDEVIDQRPMAL 228
LY KHTGQSIE I++ M+RD +M P EA FG+ID+V+ RP A+
Sbjct: 176 DLYKKHTGQSIENIEEAMERDKYMFPNEAAAFGLIDKVLS-RPQAI 220
>gi|407776940|ref|ZP_11124211.1| ATP-dependent Clp protease proteolytic subunit [Nitratireductor
pacificus pht-3B]
gi|407301105|gb|EKF20226.1| ATP-dependent Clp protease proteolytic subunit [Nitratireductor
pacificus pht-3B]
Length = 210
Score = 262 bits (669), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 119/197 (60%), Positives = 155/197 (78%)
Query: 31 SFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKP 90
+ +L+PMV+E ++RGERAYDIFSRLLKERII I GPI D A +V AQLLFLE+ENP K
Sbjct: 8 AMNLVPMVVEQTNRGERAYDIFSRLLKERIIFITGPIEDGMASLVCAQLLFLEAENPKKE 67
Query: 91 IHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNST 150
I +Y+NSPGG VT+G+AIYDTMQ+IR ++T+C+GQAASMGSLLL +G K R A PN+
Sbjct: 68 IALYINSPGGVVTSGMAIYDTMQFIRPAVSTLCIGQAASMGSLLLCAGHKDMRFATPNAR 127
Query: 151 IMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEE 210
IM+HQPSGG+ GQA D+ H + I+++ LN +Y +HTGQ E I+K +DRD+FMT +E
Sbjct: 128 IMVHQPSGGFQGQASDIERHAQDIIKLKRRLNEVYVEHTGQDYETIEKTLDRDHFMTSDE 187
Query: 211 AKEFGIIDEVIDQRPMA 227
A+EFG+ID+V+ R A
Sbjct: 188 AREFGLIDKVMSSREAA 204
>gi|408785974|ref|ZP_11197714.1| ATP-dependent Clp protease proteolytic subunit [Rhizobium lupini
HPC(L)]
gi|424910122|ref|ZP_18333499.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Rhizobium
leguminosarum bv. viciae USDA 2370]
gi|392846153|gb|EJA98675.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Rhizobium
leguminosarum bv. viciae USDA 2370]
gi|408488163|gb|EKJ96477.1| ATP-dependent Clp protease proteolytic subunit [Rhizobium lupini
HPC(L)]
Length = 210
Score = 262 bits (669), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 114/194 (58%), Positives = 157/194 (80%)
Query: 31 SFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKP 90
+ +L+PMV+E ++RGER+YDIFSRLLKERII + GP+ D A +V AQLLFLE+ENP K
Sbjct: 8 AMALVPMVVEQTNRGERSYDIFSRLLKERIIFLTGPVEDQMASLVCAQLLFLEAENPKKE 67
Query: 91 IHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNST 150
I +Y+NSPGG VTAG+AIYDTMQ+IR ++T+C+GQAASMGSLLLA+G KG R A PN+
Sbjct: 68 IALYINSPGGVVTAGMAIYDTMQFIRPAVSTLCVGQAASMGSLLLAAGEKGMRFATPNAR 127
Query: 151 IMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEE 210
IM+HQPSGG+ GQA D+ H + I+++ LN +Y KHTG+++E ++K +DRD+FM +E
Sbjct: 128 IMVHQPSGGFQGQASDIERHARDIIKMKRRLNEVYVKHTGRTLEEVEKTLDRDHFMDADE 187
Query: 211 AKEFGIIDEVIDQR 224
AK++G+ID+++ R
Sbjct: 188 AKDWGVIDKILTSR 201
>gi|253701609|ref|YP_003022798.1| ATP-dependent Clp protease proteolytic subunit [Geobacter sp. M21]
gi|259585955|sp|C6E2T0.1|CLPP_GEOSM RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|251776459|gb|ACT19040.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Geobacter sp.
M21]
Length = 199
Score = 262 bits (669), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 115/188 (61%), Positives = 157/188 (83%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
L+P+V+E + RGER+YDI+SRLLK+RII + G I+D+ A++V+AQLLFLE+E+P K IH+
Sbjct: 2 LVPIVVEQTGRGERSYDIYSRLLKDRIIFLGGGIDDNVANLVIAQLLFLEAEDPDKDIHL 61
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VTAG+AIYDTM+YI++P++TIC+GQAASMG+ LL+ G KG+R +L NS IMI
Sbjct: 62 YINSPGGVVTAGMAIYDTMRYIKAPVSTICVGQAASMGAFLLSGGEKGKRYSLVNSRIMI 121
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQP GG+ GQA D+ IH K+I+R+ D LNAL +HTGQS+E + + +RDYFM+ EEAK
Sbjct: 122 HQPLGGFQGQATDIHIHAKEILRMKDELNALLAEHTGQSVEKVAADTERDYFMSGEEAKN 181
Query: 214 FGIIDEVI 221
+GIID ++
Sbjct: 182 YGIIDAIV 189
>gi|410901755|ref|XP_003964361.1| PREDICTED: putative ATP-dependent Clp protease proteolytic subunit,
mitochondrial-like [Takifugu rubripes]
Length = 270
Score = 262 bits (669), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 118/194 (60%), Positives = 158/194 (81%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
L+P+V+E + RGERAYDI+SRLL+ERI+C+ GPI+D A +V+AQLLFL+SE+ +KPIHM
Sbjct: 34 LVPIVVEQTGRGERAYDIYSRLLRERIVCVMGPIDDSVASLVIAQLLFLQSESNNKPIHM 93
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VTAGLAIYDTMQYI +PI+T C+GQAASMGSLLLA+GT G R +LPN+ +MI
Sbjct: 94 YINSPGGVVTAGLAIYDTMQYILNPISTWCVGQAASMGSLLLAAGTAGMRHSLPNARVMI 153
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQPSGG GQA D+ I ++I+++ +N +Y KHTGQ +E I+ M+RD +++P EA++
Sbjct: 154 HQPSGGARGQATDIAIQAEEILKLKRQINNIYAKHTGQPLETIESVMERDRYLSPMEAQD 213
Query: 214 FGIIDEVIDQRPMA 227
FG+ID V+ P A
Sbjct: 214 FGLIDLVLVHPPQA 227
>gi|74317695|ref|YP_315435.1| ATP-dependent Clp protease proteolytic subunit [Thiobacillus
denitrificans ATCC 25259]
gi|90183186|sp|Q3SI98.1|CLPP_THIDA RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|74057190|gb|AAZ97630.1| peptidase S14, ClpP [Thiobacillus denitrificans ATCC 25259]
Length = 212
Score = 262 bits (669), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 114/195 (58%), Positives = 157/195 (80%)
Query: 30 RSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSK 89
+ L+PMV+E S RGERAYDI+SRLLKER+I + GP+ND TA+++VAQ+LFLESENP K
Sbjct: 13 QGLGLVPMVVEQSGRGERAYDIYSRLLKERVIFLVGPVNDATANLIVAQMLFLESENPDK 72
Query: 90 PIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNS 149
I++Y+NSPGG V+AGLAIYDTMQ+I+ ++T+C+GQAASMG+ LL +G KG+R LPNS
Sbjct: 73 DIYLYINSPGGSVSAGLAIYDTMQFIKPDVSTLCIGQAASMGAFLLTAGAKGKRYCLPNS 132
Query: 150 TIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPE 209
+MIHQP GG+ GQA D+ IH K+I+ + LN + KHTGQS+EVI ++ DRD FM+ E
Sbjct: 133 RVMIHQPLGGFQGQASDIEIHAKEILYLKARLNGMLAKHTGQSLEVIDRDTDRDNFMSAE 192
Query: 210 EAKEFGIIDEVIDQR 224
++ ++G++D+V+ R
Sbjct: 193 DSVKYGLVDKVLTSR 207
>gi|307204646|gb|EFN83268.1| Putative ATP-dependent Clp protease proteolytic subunit,
mitochondrial [Harpegnathos saltator]
Length = 237
Score = 262 bits (669), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 118/194 (60%), Positives = 151/194 (77%)
Query: 28 SARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENP 87
S R + +P+V+E S RGERAYDI+SRLLKERIIC+ GPI D+ + VV+AQLLFL+SE+
Sbjct: 21 SKRYLNFVPVVVEQSGRGERAYDIYSRLLKERIICLMGPITDNVSSVVIAQLLFLQSESS 80
Query: 88 SKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALP 147
PIHMY+NSPGG VTAGL IYDTMQY+ P+ T C+GQA SM SLLLA+G KG R +LP
Sbjct: 81 KNPIHMYINSPGGSVTAGLGIYDTMQYVLPPVATWCVGQACSMASLLLAAGAKGMRHSLP 140
Query: 148 NSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMT 207
N+ IM HQPSGG GQA D+ I +I+++ +N LY KHTGQ +E I+ +M+RD FM+
Sbjct: 141 NARIMTHQPSGGVQGQATDIQIQALEILKLKKQINELYVKHTGQELEKIESSMERDNFMS 200
Query: 208 PEEAKEFGIIDEVI 221
P +AKEFG+ID+V+
Sbjct: 201 PIQAKEFGLIDKVL 214
>gi|21241838|ref|NP_641420.1| ATP-dependent Clp protease proteolytic subunit [Xanthomonas
axonopodis pv. citri str. 306]
gi|58580656|ref|YP_199672.1| ATP-dependent Clp protease proteolytic subunit [Xanthomonas oryzae
pv. oryzae KACC 10331]
gi|78046637|ref|YP_362812.1| ATP-dependent Clp protease proteolytic subunit [Xanthomonas
campestris pv. vesicatoria str. 85-10]
gi|84622589|ref|YP_449961.1| ATP-dependent Clp protease proteolytic subunit [Xanthomonas oryzae
pv. oryzae MAFF 311018]
gi|188578371|ref|YP_001915300.1| ATP-dependent Clp protease proteolytic subunit [Xanthomonas oryzae
pv. oryzae PXO99A]
gi|188992776|ref|YP_001904786.1| ATP-dependent Clp protease proteolytic subunit [Xanthomonas
campestris pv. campestris str. B100]
gi|289664185|ref|ZP_06485766.1| ATP-dependent Clp protease proteolytic subunit [Xanthomonas
campestris pv. vasculorum NCPPB 702]
gi|289668776|ref|ZP_06489851.1| ATP-dependent Clp protease proteolytic subunit [Xanthomonas
campestris pv. musacearum NCPPB 4381]
gi|294666562|ref|ZP_06731803.1| ATP-dependent Clp protease proteolytic subunit [Xanthomonas fuscans
subsp. aurantifolii str. ICPB 10535]
gi|325914926|ref|ZP_08177258.1| ATP-dependent Clp protease proteolytic subunit ClpP [Xanthomonas
vesicatoria ATCC 35937]
gi|325927441|ref|ZP_08188688.1| ATP-dependent Clp protease proteolytic subunit ClpP [Xanthomonas
perforans 91-118]
gi|346723958|ref|YP_004850627.1| ATP-dependent Clp protease proteolytic subunit [Xanthomonas
axonopodis pv. citrumelo F1]
gi|384418134|ref|YP_005627494.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Xanthomonas
oryzae pv. oryzicola BLS256]
gi|418517007|ref|ZP_13083175.1| ATP-dependent Clp protease proteolytic subunit [Xanthomonas
axonopodis pv. malvacearum str. GSPB1386]
gi|418520577|ref|ZP_13086625.1| ATP-dependent Clp protease proteolytic subunit [Xanthomonas
axonopodis pv. malvacearum str. GSPB2388]
gi|25008307|sp|Q8PNI5.1|CLPP_XANAC RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|67460159|sp|Q5H434.1|CLPP_XANOR RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|90183187|sp|Q3BWQ1.1|CLPP_XANC5 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|110816521|sp|Q2P6Z0.1|CLPP_XANOM RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|226706557|sp|B0RTF7.1|CLPP_XANCB RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|226706558|sp|B2SMI3.1|CLPP_XANOP RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|21107218|gb|AAM35956.1| ATP-dependent Clp protease proteolytic subunit [Xanthomonas
axonopodis pv. citri str. 306]
gi|58425250|gb|AAW74287.1| ATP-dependent Clp protease proteolytic subunit [Xanthomonas oryzae
pv. oryzae KACC 10331]
gi|78035067|emb|CAJ22712.1| ATP-dependent Clp protease [Xanthomonas campestris pv. vesicatoria
str. 85-10]
gi|84366529|dbj|BAE67687.1| ATP-dependent Clp protease proteolytic subunit [Xanthomonas oryzae
pv. oryzae MAFF 311018]
gi|167734536|emb|CAP52746.1| ATP-dependent Clp protease [Xanthomonas campestris pv. campestris]
gi|188522823|gb|ACD60768.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Xanthomonas
oryzae pv. oryzae PXO99A]
gi|292603706|gb|EFF47116.1| ATP-dependent Clp protease proteolytic subunit [Xanthomonas fuscans
subsp. aurantifolii str. ICPB 10535]
gi|325538819|gb|EGD10483.1| ATP-dependent Clp protease proteolytic subunit ClpP [Xanthomonas
vesicatoria ATCC 35937]
gi|325542191|gb|EGD13686.1| ATP-dependent Clp protease proteolytic subunit ClpP [Xanthomonas
perforans 91-118]
gi|346648705|gb|AEO41329.1| ATP-dependent Clp protease proteolytic subunit [Xanthomonas
axonopodis pv. citrumelo F1]
gi|353461048|gb|AEQ95327.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Xanthomonas
oryzae pv. oryzicola BLS256]
gi|410703462|gb|EKQ61953.1| ATP-dependent Clp protease proteolytic subunit [Xanthomonas
axonopodis pv. malvacearum str. GSPB2388]
gi|410706220|gb|EKQ64682.1| ATP-dependent Clp protease proteolytic subunit [Xanthomonas
axonopodis pv. malvacearum str. GSPB1386]
Length = 208
Score = 262 bits (669), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 116/199 (58%), Positives = 161/199 (80%)
Query: 27 ISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESEN 86
I ++ +L+PMV+E +SRGERAYDI+SRLLKER+I + GPI+D A+V+VAQLLFLE++N
Sbjct: 3 IVTKALNLVPMVVEQTSRGERAYDIYSRLLKERLIFLVGPIDDHMANVIVAQLLFLEADN 62
Query: 87 PSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRAL 146
P K I +Y+NSPGG VTAG+AIYDTMQYI+ ++TIC+GQAASMG+LLLASG G+R AL
Sbjct: 63 PEKDISIYINSPGGVVTAGMAIYDTMQYIKPDVSTICVGQAASMGALLLASGAAGKRYAL 122
Query: 147 PNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFM 206
PNS +MIHQP GG+ GQA D+ IH ++I+ + LN + KHTGQS+E I ++ +RD F
Sbjct: 123 PNSRVMIHQPLGGFQGQATDIDIHAREILTLRSRLNEILAKHTGQSLETIARDTERDNFK 182
Query: 207 TPEEAKEFGIIDEVIDQRP 225
+ +A+ +G++D+V+++RP
Sbjct: 183 SAVDAQAYGLVDQVLERRP 201
>gi|15837789|ref|NP_298477.1| ATP-dependent Clp protease proteolytic subunit [Xylella fastidiosa
9a5c]
gi|18203347|sp|Q9PE41.1|CLPP_XYLFA RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|9106157|gb|AAF83997.1|AE003953_1 ATP-dependent Clp protease proteolytic subunit [Xylella fastidiosa
9a5c]
Length = 208
Score = 262 bits (669), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 117/200 (58%), Positives = 161/200 (80%)
Query: 30 RSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSK 89
++ +L+PMV+E +SRGERAYDI+SRLLKER+I + GPI+D A+++VAQLLFLE+ENP K
Sbjct: 6 KALNLVPMVVEQTSRGERAYDIYSRLLKERLIFLVGPIDDYMANLIVAQLLFLEAENPEK 65
Query: 90 PIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNS 149
I++Y+NSPGG VTAG+AIYDTMQYI+ ++TIC+GQAASMG+LLLASG G+R ALPNS
Sbjct: 66 DINIYINSPGGVVTAGMAIYDTMQYIKPAVSTICVGQAASMGALLLASGASGKRYALPNS 125
Query: 150 TIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPE 209
+MIHQP GG+ GQA D+ IH ++I+ + LN + KHTGQS+E I + +RD F +
Sbjct: 126 RVMIHQPLGGFQGQATDIDIHAREILALRARLNEILAKHTGQSLETIAHDTERDNFKSAV 185
Query: 210 EAKEFGIIDEVIDQRPMALV 229
+A+ +G++D+V+ QRP L+
Sbjct: 186 DAQAYGLVDQVLGQRPEELI 205
>gi|387131588|ref|YP_006294478.1| ATP-dependent Clp protease proteolytic subunit [Methylophaga sp.
JAM7]
gi|386272877|gb|AFJ03791.1| ATP-dependent Clp protease proteolytic subunit [Methylophaga sp.
JAM7]
Length = 211
Score = 262 bits (669), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 117/202 (57%), Positives = 159/202 (78%)
Query: 24 SAQISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLE 83
S + + S +L+P+V+E +SRGER+YDI+SRLLKER+I + G + D A+++VAQLLFLE
Sbjct: 6 SGETQSVSNALVPIVVEQTSRGERSYDIYSRLLKERVIFLVGQVEDHMANLIVAQLLFLE 65
Query: 84 SENPSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGER 143
SENP K IH+Y+NSPGG VTAGLAIYDTMQ+I+ ++T+C+GQAASMG+LLL +G G+R
Sbjct: 66 SENPDKDIHLYINSPGGAVTAGLAIYDTMQFIKPDVSTLCIGQAASMGALLLTAGAAGKR 125
Query: 144 RALPNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRD 203
ALPNS +M+HQP GG+ GQA D+ IH K+I+ + D LN + HTGQ IE I+K+ DRD
Sbjct: 126 FALPNSRMMVHQPLGGFQGQASDIDIHAKEILSIRDRLNRIMSHHTGQKIEQIEKDTDRD 185
Query: 204 YFMTPEEAKEFGIIDEVIDQRP 225
FM E+A ++G+ID V+ +RP
Sbjct: 186 NFMNGEQAAKYGLIDSVLTERP 207
>gi|126668931|ref|ZP_01739872.1| ATP-dependent Clp protease proteolytic subunit [Marinobacter sp.
ELB17]
gi|126626594|gb|EAZ97250.1| ATP-dependent Clp protease proteolytic subunit [Marinobacter sp.
ELB17]
Length = 211
Score = 261 bits (668), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 114/194 (58%), Positives = 155/194 (79%)
Query: 31 SFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKP 90
S +L+PMVIE ++RGER++DI+SRLLKER+I + GP+ D A++VVAQLLFLESENP K
Sbjct: 14 SAALVPMVIEQTARGERSFDIYSRLLKERVIFMVGPVEDHMANLVVAQLLFLESENPDKD 73
Query: 91 IHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNST 150
IH+Y+NSPGG V+AG++IYDTMQ+I+ + T+C+GQAASMG+ LLA G G+R LPNS
Sbjct: 74 IHLYINSPGGSVSAGMSIYDTMQFIKPDVATLCVGQAASMGAFLLAGGAAGKRACLPNSR 133
Query: 151 IMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEE 210
+MIHQP GGY GQA D+ IHT++I+++ LN++ HTGQ +E I ++ DRD FM P +
Sbjct: 134 VMIHQPLGGYQGQATDIEIHTREILKIRHTLNSILAHHTGQDLETISRDTDRDNFMDPTQ 193
Query: 211 AKEFGIIDEVIDQR 224
AK +G+ID V+D+R
Sbjct: 194 AKAYGLIDSVLDKR 207
>gi|323703643|ref|ZP_08115286.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfotomaculum nigrificans DSM 574]
gi|333922902|ref|YP_004496482.1| ATP-dependent Clp protease proteolytic subunit [Desulfotomaculum
carboxydivorans CO-1-SRB]
gi|323531415|gb|EGB21311.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfotomaculum nigrificans DSM 574]
gi|333748463|gb|AEF93570.1| ATP-dependent Clp protease proteolytic subunit [Desulfotomaculum
carboxydivorans CO-1-SRB]
Length = 195
Score = 261 bits (668), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 119/192 (61%), Positives = 156/192 (81%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+P+V+E ++RGERAYDI+SRLLK+RII I GPI+D A++V+AQ LFLE+E+P K IH
Sbjct: 3 ALVPIVVEQTNRGERAYDIYSRLLKDRIIFIGGPIDDHIANLVIAQFLFLEAEDPEKDIH 62
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
+Y+NSPGG VTAGLAIYDTMQYI+ ++TICLGQAASMGS LLA+G KG+R ALP + IM
Sbjct: 63 LYINSPGGVVTAGLAIYDTMQYIKPAVSTICLGQAASMGSFLLAAGAKGKRYALPQARIM 122
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQP GG GQA D+ IH ++I+R+ + LN HTGQ +E I ++ +RD+FM+ EEAK
Sbjct: 123 IHQPLGGVQGQATDIDIHAREILRMREILNERLSHHTGQPLEKIARDTERDFFMSAEEAK 182
Query: 213 EFGIIDEVIDQR 224
++GIIDEV+ R
Sbjct: 183 KYGIIDEVMPYR 194
>gi|254455562|ref|ZP_05068991.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Candidatus
Pelagibacter sp. HTCC7211]
gi|207082564|gb|EDZ59990.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Candidatus
Pelagibacter sp. HTCC7211]
Length = 203
Score = 261 bits (668), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 114/201 (56%), Positives = 160/201 (79%)
Query: 24 SAQISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLE 83
+ ++S +L+PMV+E S++GERAYDI+SRLLKERII + G IND+ A +V AQLLFLE
Sbjct: 2 TTKLSEHMNTLVPMVVEQSNKGERAYDIYSRLLKERIIFLTGQINDNVASLVTAQLLFLE 61
Query: 84 SENPSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGER 143
+E+P K I++Y+NSPGG VTAGL IYDTMQY++ I+T+C+GQAASMGS LLA+GTKG+R
Sbjct: 62 AEDPKKEIYLYINSPGGLVTAGLGIYDTMQYVKPDISTLCIGQAASMGSFLLAAGTKGKR 121
Query: 144 RALPNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRD 203
+LPNS +M+HQPS G+ GQ D+ IH ++ + LN +Y KHTG+S++ ++ ++RD
Sbjct: 122 FSLPNSRVMVHQPSAGFQGQVTDIEIHANEVSSLKKRLNEIYSKHTGKSVDEVKAALERD 181
Query: 204 YFMTPEEAKEFGIIDEVIDQR 224
FMT + AK+FG+IDEV+++R
Sbjct: 182 NFMTADVAKDFGLIDEVVEKR 202
>gi|120554758|ref|YP_959109.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Marinobacter
aquaeolei VT8]
gi|387813879|ref|YP_005429362.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
protease [Marinobacter hydrocarbonoclasticus ATCC 49840]
gi|120324607|gb|ABM18922.1| ATP-dependent Clp protease proteolytic subunit ClpP [Marinobacter
aquaeolei VT8]
gi|381338892|emb|CCG94939.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Marinobacter hydrocarbonoclasticus ATCC
49840]
Length = 211
Score = 261 bits (668), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 113/194 (58%), Positives = 157/194 (80%)
Query: 31 SFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKP 90
S L+P+VIE ++RGER++DI+SRLLKER+I + GP+ D A++VVAQLLFLESENP K
Sbjct: 14 SSGLVPIVIEQTARGERSFDIYSRLLKERVIFLVGPVEDHMANLVVAQLLFLESENPDKD 73
Query: 91 IHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNST 150
IH+Y+NSPGG V+AG++IYDTMQ+++ + T+C+GQAASMG+ LL+ G KG+R LP+S
Sbjct: 74 IHLYINSPGGSVSAGMSIYDTMQFVKPDVATLCIGQAASMGAFLLSGGAKGKRACLPHSR 133
Query: 151 IMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEE 210
+MIHQP GGY GQA D+ IHT++I+++ + LN L +HTGQ IE I ++ DRD FM P +
Sbjct: 134 VMIHQPLGGYQGQATDIEIHTREILKIRNTLNELLAEHTGQDIETIARDTDRDNFMDPAQ 193
Query: 211 AKEFGIIDEVIDQR 224
AKE+G+ID ++D+R
Sbjct: 194 AKEYGLIDTILDKR 207
>gi|404369989|ref|ZP_10975316.1| ATP-dependent Clp protease proteolytic subunit [Clostridium sp.
7_2_43FAA]
gi|226913880|gb|EEH99081.1| ATP-dependent Clp protease proteolytic subunit [Clostridium sp.
7_2_43FAA]
Length = 198
Score = 261 bits (668), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 115/189 (60%), Positives = 157/189 (83%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
SL+PMV+E +SRGER+YDIFSRLLK+RII ++G IND T+++VV+QLLFLESE+P K IH
Sbjct: 2 SLVPMVVEQTSRGERSYDIFSRLLKDRIIMLSGEINDTTSNLVVSQLLFLESEDPDKDIH 61
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
+Y+NSPGG +TAG+AIYDTMQYI+ ++TIC+G AASMGS LL+SG KG+R LPNS IM
Sbjct: 62 LYINSPGGSITAGMAIYDTMQYIKPDVSTICIGMAASMGSFLLSSGAKGKRFVLPNSEIM 121
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQP GG+ GQA D IH ++I+++ ++LN + ++T Q +E I+ +++RDYFMT EEA
Sbjct: 122 IHQPLGGFQGQATDFDIHARRIIKIKESLNRILSENTNQPLEKIKTDVERDYFMTAEEAM 181
Query: 213 EFGIIDEVI 221
+G++D+VI
Sbjct: 182 NYGLVDKVI 190
>gi|372279706|ref|ZP_09515742.1| ATP-dependent Clp protease proteolytic subunit [Oceanicola sp.
S124]
Length = 210
Score = 261 bits (668), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 118/192 (61%), Positives = 154/192 (80%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E +SRGERAYDIFSRLLKERII ++GP++D + ++VAQLL LE+ENPSK I
Sbjct: 11 NLVPMVVEQTSRGERAYDIFSRLLKERIIFLSGPVHDGMSSLIVAQLLHLEAENPSKEIS 70
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
MY+NSPGG VT+GL+IYDTMQYIR ++T+ +GQAASMGSLLLA G G R ALPNS +M
Sbjct: 71 MYINSPGGVVTSGLSIYDTMQYIRPKVSTLVVGQAASMGSLLLAGGAAGMRFALPNSEVM 130
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
+HQPSGGY GQA D+ IH + R+ + LN +Y KHTGQ E + ++RD FM+ +EAK
Sbjct: 131 VHQPSGGYQGQATDILIHARHTERLKERLNRIYVKHTGQDYETVVDALERDNFMSAQEAK 190
Query: 213 EFGIIDEVIDQR 224
++G+IDE++D R
Sbjct: 191 DWGLIDEIVDSR 202
>gi|337269330|ref|YP_004613385.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Mesorhizobium
opportunistum WSM2075]
gi|336029640|gb|AEH89291.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Mesorhizobium
opportunistum WSM2075]
Length = 209
Score = 261 bits (668), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 118/195 (60%), Positives = 156/195 (80%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E ++RGERAYDIFSRLLKERII I GP+ D A +V AQLLFLE+ENP K I+
Sbjct: 10 NLVPMVVEQTNRGERAYDIFSRLLKERIIFITGPVEDGMATLVCAQLLFLEAENPKKEIN 69
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
+Y+NSPGG VT+G+AIYDTMQ+I+ ++T+C+GQAASMGSLLL +G K R A PN+ IM
Sbjct: 70 LYINSPGGVVTSGMAIYDTMQFIKPAVSTLCIGQAASMGSLLLTAGHKDMRFATPNARIM 129
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
+HQPSGG+ GQA D+ H + I+++ LN +Y KHTG+S E I+K +DRD+FMT +EA+
Sbjct: 130 VHQPSGGFQGQASDIERHAQDIIKLKRRLNEVYVKHTGKSYEEIEKTLDRDHFMTADEAR 189
Query: 213 EFGIIDEVIDQRPMA 227
+FG+ID+VI R A
Sbjct: 190 DFGLIDKVISSREAA 204
>gi|292493106|ref|YP_003528545.1| ATP-dependent Clp protease proteolytic subunit ClpP [Nitrosococcus
halophilus Nc4]
gi|291581701|gb|ADE16158.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Nitrosococcus
halophilus Nc4]
Length = 203
Score = 261 bits (668), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 114/192 (59%), Positives = 157/192 (81%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E ++RGERAYDI+SRLLKER++ + GP+ D A++VVAQLLFLESENP K IH
Sbjct: 7 TLVPMVVEQTARGERAYDIYSRLLKERVVFLVGPVEDHMANLVVAQLLFLESENPDKDIH 66
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
+Y+NSPGG VTAGL++YDTMQ+I+ I+T+C+GQAASMG++LLA GT+G+R LP+S ++
Sbjct: 67 LYINSPGGSVTAGLSVYDTMQFIKPDISTLCIGQAASMGAVLLAGGTQGKRHCLPHSRLL 126
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQP GG+ GQA D+ IH ++I+ V + LN + KHTGQ IE IQ++ DRDYFM+ E+
Sbjct: 127 IHQPLGGFQGQAADIDIHAREIMLVRERLNHILAKHTGQPIEKIQRDTDRDYFMSANESV 186
Query: 213 EFGIIDEVIDQR 224
+G++D V+ QR
Sbjct: 187 AYGLVDSVLQQR 198
>gi|393769361|ref|ZP_10357885.1| ATP-dependent Clp protease proteolytic subunit [Methylobacterium
sp. GXF4]
gi|392725260|gb|EIZ82601.1| ATP-dependent Clp protease proteolytic subunit [Methylobacterium
sp. GXF4]
Length = 208
Score = 261 bits (668), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 118/193 (61%), Positives = 152/193 (78%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E SSRGERA+DI+SRLL+ERII + GP+ D A ++VAQLLFLE+ENP K I
Sbjct: 11 ALVPMVVEQSSRGERAFDIYSRLLRERIIFLTGPVEDYGASLIVAQLLFLEAENPKKEIS 70
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
Y+NSPGG VT+GL+IYDTMQ+IR P+ T+C+GQAASMGSLLL +G G R ALPN+ IM
Sbjct: 71 FYINSPGGVVTSGLSIYDTMQFIRCPVTTLCVGQAASMGSLLLTAGEPGHRFALPNARIM 130
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
+HQPSGG+ GQA D+ IH ++I + LN +Y KHTG+ I+ ++RD FMT + AK
Sbjct: 131 VHQPSGGFQGQATDILIHAREIEALKRRLNEIYVKHTGRDYAAIENALERDNFMTADAAK 190
Query: 213 EFGIIDEVIDQRP 225
EFG+IDEVI +RP
Sbjct: 191 EFGLIDEVIQKRP 203
>gi|383482277|ref|YP_005391191.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia
montanensis str. OSU 85-930]
gi|378934631|gb|AFC73132.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia
montanensis str. OSU 85-930]
Length = 201
Score = 261 bits (668), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 122/199 (61%), Positives = 157/199 (78%), Gaps = 1/199 (0%)
Query: 32 FSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPI 91
S +P+VIE +SRGERAYDI+SRLLKERII + + D A+++VAQLLFLE+ NP K I
Sbjct: 1 MSYVPIVIESTSRGERAYDIYSRLLKERIIFVCSTVEDHMANLIVAQLLFLEAANPKKDI 60
Query: 92 HMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTI 151
+MY+NSPGG VTAGLAIYDTMQYI+ + T+C+GQA SMGSLLL G KG R +LP+S I
Sbjct: 61 YMYINSPGGVVTAGLAIYDTMQYIKPKVATLCIGQACSMGSLLLCGGEKGMRYSLPHSRI 120
Query: 152 MIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEA 211
MIHQPSGGY GQA D+ IH ++ +++ LN LY KHTGQ ++ I+K+M+RD FM+PEEA
Sbjct: 121 MIHQPSGGYKGQATDIEIHAQETLKIKRLLNELYSKHTGQELKHIEKSMERDNFMSPEEA 180
Query: 212 KEFGIIDEVIDQR-PMALV 229
K+FG++D +I R MAL+
Sbjct: 181 KKFGLVDNIISSRDTMALL 199
>gi|162148815|ref|YP_001603276.1| ATP-dependent Clp protease proteolytic subunit [Gluconacetobacter
diazotrophicus PAl 5]
gi|209545437|ref|YP_002277666.1| ATP-dependent Clp protease proteolytic subunit [Gluconacetobacter
diazotrophicus PAl 5]
gi|161787392|emb|CAP56987.1| ATP-dependent Clp protease proteolytic subunit 1 (Endopeptidase Clp
1) [Gluconacetobacter diazotrophicus PAl 5]
gi|209533114|gb|ACI53051.1| Endopeptidase Clp [Gluconacetobacter diazotrophicus PAl 5]
Length = 212
Score = 261 bits (668), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 117/191 (61%), Positives = 154/191 (80%)
Query: 31 SFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKP 90
S +L+PMV+E +SRGERA+DI+SRLL+ERII + GP+ D A VV AQLL+LES NP+K
Sbjct: 11 SSALVPMVVEQTSRGERAFDIYSRLLQERIIFLTGPVYDQVAAVVSAQLLYLESVNPTKE 70
Query: 91 IHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNST 150
I Y+NSPGG V+AGLAIYDTMQYIRSP++T+C+GQAASMGSLLLA G KG R ALPN+
Sbjct: 71 ISFYINSPGGVVSAGLAIYDTMQYIRSPVSTVCIGQAASMGSLLLAGGEKGRRFALPNAR 130
Query: 151 IMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEE 210
+M+HQPSGG GQA D+ I ++I+ + LN +Y HTGQ++E I++ ++RD +M+ EE
Sbjct: 131 VMVHQPSGGAQGQASDIEIQAREILTIRQRLNEIYETHTGQTLEDIERRLERDSYMSAEE 190
Query: 211 AKEFGIIDEVI 221
A+ FGI+DEV+
Sbjct: 191 AQAFGIVDEVV 201
>gi|358450532|ref|ZP_09160990.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Marinobacter
manganoxydans MnI7-9]
gi|385331926|ref|YP_005885877.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Marinobacter
adhaerens HP15]
gi|311695076|gb|ADP97949.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Marinobacter
adhaerens HP15]
gi|357225181|gb|EHJ03688.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Marinobacter
manganoxydans MnI7-9]
Length = 201
Score = 261 bits (668), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 113/191 (59%), Positives = 154/191 (80%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
L+P+VIE ++RGER++DI+SRLLKER+I + GP+ D A+++VAQLLFLESENP K IH+
Sbjct: 7 LVPIVIEQTARGERSFDIYSRLLKERVIFMVGPVEDHMANLIVAQLLFLESENPDKDIHL 66
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VTAG++IYDTMQ+I+ + T+C+GQAASMG+ LLA G G+R LPNS +MI
Sbjct: 67 YINSPGGSVTAGMSIYDTMQFIKPDVATLCVGQAASMGAFLLAGGAAGKRACLPNSRVMI 126
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQP GGY GQA D+ IHT++I+++ LN++ HTGQ +E I K+ DRD FM P +AKE
Sbjct: 127 HQPLGGYQGQATDIEIHTREILKIRHTLNSILAHHTGQDLETIAKDTDRDNFMDPAQAKE 186
Query: 214 FGIIDEVIDQR 224
+G+ID ++D+R
Sbjct: 187 YGLIDSILDKR 197
>gi|302035647|ref|YP_003795969.1| ATP-dependent Clp protease proteolytic subunit clpP [Candidatus
Nitrospira defluvii]
gi|300603711|emb|CBK40042.1| ATP-dependent Clp protease, proteolytic subunit clpP [Candidatus
Nitrospira defluvii]
Length = 211
Score = 261 bits (668), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 116/193 (60%), Positives = 159/193 (82%), Gaps = 1/193 (0%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
L+P+VIE ++RGERAYDI+SRLLK+RII + PI+D A++++AQLLFLE+E+P K I++
Sbjct: 2 LVPIVIEQTNRGERAYDIYSRLLKDRIIFLGAPIDDVFANLIIAQLLFLEAEDPEKDINL 61
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VTAGL IYDTMQY++ INTICLGQAASMG+ LL +GTKG+R ALPN+ +MI
Sbjct: 62 YINSPGGSVTAGLGIYDTMQYVKPAINTICLGQAASMGAFLLTAGTKGKRYALPNARVMI 121
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQP GG+ GQA ++ IH ++I+++ + LN + KHTGQ ++ I ++ +RDYFM+ EEAK
Sbjct: 122 HQPMGGFQGQATEIDIHAREILKIRERLNEIMAKHTGQPLDKISQDTERDYFMSSEEAKR 181
Query: 214 FGIIDEVIDQRPM 226
+G+IDEVI RP+
Sbjct: 182 YGLIDEVI-TRPL 193
>gi|159043937|ref|YP_001532731.1| ATP-dependent Clp protease proteolytic subunit [Dinoroseobacter
shibae DFL 12]
gi|189082456|sp|A8LJA8.1|CLPP_DINSH RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|157911697|gb|ABV93130.1| endopeptidase Clp [Dinoroseobacter shibae DFL 12]
Length = 208
Score = 261 bits (668), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 117/193 (60%), Positives = 156/193 (80%)
Query: 32 FSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPI 91
+L+PMV+E +SRGERAYDIFSRLLKERI+ +NGP++D + +VVAQLL LE+ENPSK I
Sbjct: 9 MNLVPMVVEQTSRGERAYDIFSRLLKERIVFVNGPVHDGMSQLVVAQLLHLEAENPSKEI 68
Query: 92 HMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTI 151
MY+NSPGG VT+GL+IYDTMQYI+ ++T+ +GQAASMGSLLL +G KG R +LPNS I
Sbjct: 69 SMYINSPGGVVTSGLSIYDTMQYIKPKVSTLVVGQAASMGSLLLTAGEKGMRFSLPNSRI 128
Query: 152 MIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEA 211
M+HQPSGGY GQA D+ IH ++ ++ D LN +Y KHTGQ ++ + ++RD FM E+A
Sbjct: 129 MVHQPSGGYQGQATDIMIHAQETQKLKDRLNQIYVKHTGQPLKKVVDALERDNFMDAEQA 188
Query: 212 KEFGIIDEVIDQR 224
KE+G+IDE+++ R
Sbjct: 189 KEWGLIDEIVESR 201
>gi|374623544|ref|ZP_09696052.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Ectothiorhodospira sp. PHS-1]
gi|373942653|gb|EHQ53198.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Ectothiorhodospira sp. PHS-1]
Length = 216
Score = 261 bits (668), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 114/200 (57%), Positives = 161/200 (80%)
Query: 27 ISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESEN 86
+ R+ +L+PMV+E ++RGERAYDI+SRLLKER+I + GP+ D A+V+VAQLLFLESEN
Sbjct: 13 LDTRALNLVPMVVEQTARGERAYDIYSRLLKERVIFVVGPVEDYMANVIVAQLLFLESEN 72
Query: 87 PSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRAL 146
P K I +Y+NSPGG VTAGLAIYDTMQ+I+ ++T+C+GQAASMG++LLA G G+R L
Sbjct: 73 PDKDISLYINSPGGVVTAGLAIYDTMQFIKPDVSTLCIGQAASMGAVLLAGGAAGKRYCL 132
Query: 147 PNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFM 206
P+S +MIHQP GG+ GQA D+ IH ++I++V D LN + KHTGQ +E I+++ +RD F+
Sbjct: 133 PHSRVMIHQPLGGFQGQATDIDIHAREILKVRDQLNGILSKHTGQPVERIEQDTERDRFL 192
Query: 207 TPEEAKEFGIIDEVIDQRPM 226
+ +A+E+GIID+V++ R +
Sbjct: 193 SATDAQEYGIIDKVLETRSL 212
>gi|383317431|ref|YP_005378273.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Frateuria
aurantia DSM 6220]
gi|379044535|gb|AFC86591.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Frateuria
aurantia DSM 6220]
Length = 209
Score = 261 bits (668), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 117/202 (57%), Positives = 159/202 (78%)
Query: 31 SFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKP 90
+ +L+PMV+E ++RGER+YDI+SRLLKER+I + G +ND A+V++AQ+LFLESENP K
Sbjct: 8 NLNLVPMVVEQTARGERSYDIYSRLLKERVIFLVGEVNDQVANVLIAQMLFLESENPDKD 67
Query: 91 IHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNST 150
IH+Y+NSPGG VTAGLAIYDTMQYI+ ++T+C+GQA S SLLL +G KG+R +LPNS
Sbjct: 68 IHLYINSPGGVVTAGLAIYDTMQYIKCDVSTMCVGQACSAASLLLMAGAKGKRFSLPNSR 127
Query: 151 IMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEE 210
+MIHQPSGG GQA D+ I ++I+ + LN +Y HTGQ +E I+++M+RD FM+ E
Sbjct: 128 VMIHQPSGGARGQATDIEIQAQEILYLRRKLNQIYVDHTGQPLEKIERDMERDRFMSAET 187
Query: 211 AKEFGIIDEVIDQRPMALVTDA 232
AKE+G+IDEV+D+R V A
Sbjct: 188 AKEYGLIDEVLDRRATETVKSA 209
>gi|319784104|ref|YP_004143580.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Mesorhizobium
ciceri biovar biserrulae WSM1271]
gi|317169992|gb|ADV13530.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Mesorhizobium
ciceri biovar biserrulae WSM1271]
Length = 209
Score = 261 bits (668), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 119/195 (61%), Positives = 155/195 (79%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E ++RGERAYDIFSRLLKERII I GP+ D A +V AQLLFLE+ENP K I+
Sbjct: 10 NLVPMVVEQTNRGERAYDIFSRLLKERIIFITGPVEDGMATLVCAQLLFLEAENPKKEIN 69
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
+Y+NSPGG VT+G+AIYDTMQ+I+ ++T+C+GQAASMGSLLL +G K R A PN+ IM
Sbjct: 70 LYINSPGGVVTSGMAIYDTMQFIKPAVSTLCIGQAASMGSLLLTAGHKDMRFATPNARIM 129
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
+HQPSGG+ GQA D+ H I+++ LN +Y KHTG+S E I+K +DRD+FMT +EAK
Sbjct: 130 VHQPSGGFQGQASDIERHALDIIKLKRRLNEVYVKHTGKSYEEIEKTLDRDHFMTADEAK 189
Query: 213 EFGIIDEVIDQRPMA 227
+FG+ID+VI R A
Sbjct: 190 DFGLIDKVISSREAA 204
>gi|108762291|ref|YP_630243.1| ATP-dependent Clp protease proteolytic subunit [Myxococcus xanthus
DK 1622]
gi|338533213|ref|YP_004666547.1| ATP-dependent Clp protease proteolytic subunit [Myxococcus fulvus
HW-1]
gi|116270726|sp|Q1DAT0.1|CLPP1_MYXXD RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|108466171|gb|ABF91356.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Myxococcus
xanthus DK 1622]
gi|337259309|gb|AEI65469.1| ATP-dependent Clp protease proteolytic subunit [Myxococcus fulvus
HW-1]
Length = 206
Score = 261 bits (668), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 125/208 (60%), Positives = 162/208 (77%), Gaps = 4/208 (1%)
Query: 32 FSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPI 91
F +P VIE + RGER+YDI+SRLLK+RI+ + I+DD A+V+VAQLLFLESE+P K I
Sbjct: 3 FMPVPYVIEQTHRGERSYDIYSRLLKDRIVMLGTEIDDDVANVIVAQLLFLESEDPDKDI 62
Query: 92 HMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTI 151
++Y+NSPGG VTAGLAIYDTMQY++ P++TIC+GQAASMG++LL +G KG+R ALP+S I
Sbjct: 63 NLYINSPGGSVTAGLAIYDTMQYVKCPVSTICVGQAASMGAVLLLAGAKGKRYALPSSRI 122
Query: 152 MIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEA 211
MIHQP GG GQA D+ I K+I+R+ LN L KHTGQSIE ++K+ DRDYFM EA
Sbjct: 123 MIHQPLGGVRGQATDIEIQAKEILRMKAKLNELIVKHTGQSIERVEKDTDRDYFMGASEA 182
Query: 212 KEFGIIDEVIDQRPMALVTDAVGREGKE 239
K +GIIDE+ Q P +V +G+E K+
Sbjct: 183 KAYGIIDEI--QNPRKVV--GLGKEEKK 206
>gi|357629245|gb|EHJ78139.1| hypothetical protein KGM_01435 [Danaus plexippus]
Length = 211
Score = 261 bits (668), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 120/196 (61%), Positives = 153/196 (78%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
+IP+V+E + RGERAYDI+SRLL+ERIIC+ GPIND+ + +VVAQLLFL+SE+ KP+H+
Sbjct: 1 MIPIVVEQTGRGERAYDIYSRLLRERIICLMGPINDEISSLVVAQLLFLQSESSKKPVHL 60
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VTAGL IYDTMQYI P+ T C+GQA SM SLLLA+G G R ALPNS IMI
Sbjct: 61 YINSPGGNVTAGLGIYDTMQYITPPVATWCVGQACSMASLLLAAGAPGMRHALPNSRIMI 120
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQPSGG GQA D+ I ++I+++ +N LY +HTG IE IQ +M+RD FM+P EAK
Sbjct: 121 HQPSGGVRGQATDIQIQAEEILKLKSQINNLYVRHTGLPIERIQTSMERDCFMSPIEAKS 180
Query: 214 FGIIDEVIDQRPMALV 229
FG+ID V++ P +V
Sbjct: 181 FGLIDNVLEHPPSHVV 196
>gi|399155154|ref|ZP_10755221.1| ATP-dependent Clp protease proteolytic subunit [gamma
proteobacterium SCGC AAA007-O20]
Length = 198
Score = 261 bits (667), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 119/198 (60%), Positives = 161/198 (81%)
Query: 27 ISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESEN 86
+S ++ IPMVIE S R ERAYDI+SRLLKER++ + GP+ D TA+VVVAQLLFLESEN
Sbjct: 1 MSIQNLHQIPMVIESSGRTERAYDIYSRLLKERVVFMVGPVEDYTANVVVAQLLFLESEN 60
Query: 87 PSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRAL 146
P K IH+Y+NSPGG VTAGLAIYDTMQ+I+ I+T+C+GQA+SMG+LLL +G KG+R AL
Sbjct: 61 PDKDIHLYINSPGGSVTAGLAIYDTMQFIKPDISTLCIGQASSMGALLLTAGAKGKRFAL 120
Query: 147 PNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFM 206
P++ MIHQP GG+SGQA D+ IH ++I++ D LN++ +HTGQS++ IQK+ DRD FM
Sbjct: 121 PHARCMIHQPLGGFSGQASDIDIHAQEILKTRDKLNSILKEHTGQSMKTIQKDTDRDNFM 180
Query: 207 TPEEAKEFGIIDEVIDQR 224
+ E+ ++G+ID+V+ +R
Sbjct: 181 SASESAKYGLIDKVLTKR 198
>gi|188996270|ref|YP_001930521.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Sulfurihydrogenibium sp. YO3AOP1]
gi|188931337|gb|ACD65967.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Sulfurihydrogenibium sp. YO3AOP1]
Length = 201
Score = 261 bits (667), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 121/191 (63%), Positives = 155/191 (81%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
LIP+VIE + RGERAYDI+SRLLK+RII + PI+D A++VVAQLLFLESE+P K I+M
Sbjct: 8 LIPIVIEQTPRGERAYDIYSRLLKDRIILLGTPIDDHIANLVVAQLLFLESEDPDKDIYM 67
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VTAGLAIYDTM YI+ + TIC+GQAASMG+ LL++G KG+R +LPN+ IMI
Sbjct: 68 YINSPGGVVTAGLAIYDTMNYIKPDVVTICMGQAASMGAFLLSAGAKGKRYSLPNARIMI 127
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQP GG+ GQA D+ IH ++I+R+ LN KHTGQ IE I+ + +RDYFM+ EEAKE
Sbjct: 128 HQPLGGFQGQATDIEIHAREILRLKRMLNEYLAKHTGQPIEKIEADTERDYFMSAEEAKE 187
Query: 214 FGIIDEVIDQR 224
+G+ID+VI +R
Sbjct: 188 YGLIDKVIYKR 198
>gi|383312831|ref|YP_005365632.1| ATP-dependent Clp protease proteolytic subunit [Candidatus
Rickettsia amblyommii str. GAT-30V]
gi|378931491|gb|AFC70000.1| ATP-dependent Clp protease proteolytic subunit [Candidatus
Rickettsia amblyommii str. GAT-30V]
Length = 201
Score = 261 bits (667), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 122/199 (61%), Positives = 158/199 (79%), Gaps = 1/199 (0%)
Query: 32 FSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPI 91
S +P+VIE +SRGERAYDI+SRLLKERII + + D A+++VAQLLFLE+ENP K I
Sbjct: 1 MSYVPIVIEPTSRGERAYDIYSRLLKERIIFVCSTVEDHMANLIVAQLLFLEAENPKKDI 60
Query: 92 HMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTI 151
++Y+NSPGG VTAGLAIYDTMQYI+ + T+C+GQA SMGSLLL G KG R +LP+S I
Sbjct: 61 YIYINSPGGVVTAGLAIYDTMQYIKPKVATLCIGQACSMGSLLLCGGEKGMRYSLPHSRI 120
Query: 152 MIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEA 211
MIHQPSGGY GQA D+ IH ++ +++ LN LY KHTGQ ++ I+K+M+RD FM+PEEA
Sbjct: 121 MIHQPSGGYKGQATDIEIHAQETLKIKRLLNELYSKHTGQELKHIEKSMERDNFMSPEEA 180
Query: 212 KEFGIIDEVIDQR-PMALV 229
K+FG++D +I R MAL+
Sbjct: 181 KKFGLVDNIISSRDAMALL 199
>gi|285017388|ref|YP_003375099.1| ATP-dependent clp protease proteolytic subunit protein [Xanthomonas
albilineans GPE PC73]
gi|283472606|emb|CBA15111.1| probable atp-dependent clp protease proteolytic subunit protein
[Xanthomonas albilineans GPE PC73]
Length = 208
Score = 261 bits (667), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 116/196 (59%), Positives = 160/196 (81%)
Query: 30 RSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSK 89
++ +L+PMV+E +SRGERAYDI+SRLLKER+I + GPI+D A+VVVAQLLFLE++NP K
Sbjct: 6 KALNLVPMVVEQTSRGERAYDIYSRLLKERLIFLVGPIDDHMANVVVAQLLFLEADNPEK 65
Query: 90 PIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNS 149
I +Y+NSPGG VTAG+AIYDTMQYI+ ++TIC+GQAASMG+LLLASG G+R ALPNS
Sbjct: 66 DISLYINSPGGVVTAGMAIYDTMQYIKPDVSTICVGQAASMGALLLASGAAGKRYALPNS 125
Query: 150 TIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPE 209
+MIHQP GG+ GQA D+ IH ++I+ + LN + KHTGQS+E I ++ +RD F +
Sbjct: 126 RVMIHQPLGGFQGQATDIDIHAREILTLRARLNEVLAKHTGQSLETIARDTERDNFKSAI 185
Query: 210 EAKEFGIIDEVIDQRP 225
+A+ +G++D+V+++RP
Sbjct: 186 DAQAYGLVDQVLERRP 201
>gi|218885218|ref|YP_002434539.1| ATP-dependent Clp protease proteolytic subunit [Desulfovibrio
vulgaris str. 'Miyazaki F']
gi|226706450|sp|B8DNL4.1|CLPP_DESVM RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|218756172|gb|ACL07071.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Desulfovibrio
vulgaris str. 'Miyazaki F']
Length = 201
Score = 261 bits (667), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 118/190 (62%), Positives = 150/190 (78%)
Query: 35 IPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHMY 94
+P+VIE S R ERAYDI+SRLLK+RII + PI+D A ++ AQLLFLESENP K I++Y
Sbjct: 3 VPIVIETSGRSERAYDIYSRLLKDRIILLGTPIDDQVASLICAQLLFLESENPEKEIYLY 62
Query: 95 LNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMIH 154
+NSPGG VTAG+AIYDTMQYI SP+ T+CLGQAASMG+LLLA+G G R ALPNS IMIH
Sbjct: 63 INSPGGSVTAGMAIYDTMQYITSPVATLCLGQAASMGALLLAAGAPGMRHALPNSRIMIH 122
Query: 155 QPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKEF 214
QPSGG+ GQA D+ IH ++++R+ LN + +HTGQ +E + + +RDYFM P EAKE+
Sbjct: 123 QPSGGFHGQASDIDIHAREVLRMKANLNEIMARHTGQPVERVADDTERDYFMGPAEAKEY 182
Query: 215 GIIDEVIDQR 224
GIID ++ R
Sbjct: 183 GIIDSILTSR 192
>gi|389806651|ref|ZP_10203698.1| ATP-dependent Clp protease proteolytic subunit [Rhodanobacter
thiooxydans LCS2]
gi|388445303|gb|EIM01383.1| ATP-dependent Clp protease proteolytic subunit [Rhodanobacter
thiooxydans LCS2]
Length = 209
Score = 261 bits (667), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 113/195 (57%), Positives = 159/195 (81%)
Query: 30 RSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSK 89
++ +L+PMV+E ++RGER+YDI+SRLLKER++ + G +ND A+++VAQ+LFLESENP K
Sbjct: 7 QNLNLVPMVVEQTARGERSYDIYSRLLKERVVFLVGEVNDQVANLIVAQMLFLESENPDK 66
Query: 90 PIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNS 149
I+ Y+NSPGG VTAGLAIYDTMQ+I+ ++T+C+GQA SMGS LL +G KG+R ALPNS
Sbjct: 67 DINFYINSPGGAVTAGLAIYDTMQFIKPNVSTMCIGQACSMGSFLLMAGAKGKRFALPNS 126
Query: 150 TIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPE 209
+MIHQPSGG GQA D+ I ++I+ + + LN LY +HTGQ++E I+ +M+RD FM+
Sbjct: 127 RVMIHQPSGGAQGQATDIEIQAREILYIRERLNKLYVQHTGQTLEKIEADMERDRFMSAA 186
Query: 210 EAKEFGIIDEVIDQR 224
+AK +G+IDEV+D+R
Sbjct: 187 DAKAYGLIDEVLDKR 201
>gi|149201013|ref|ZP_01877988.1| Protease subunit of ATP-dependent Clp protease [Roseovarius sp.
TM1035]
gi|149145346|gb|EDM33372.1| Protease subunit of ATP-dependent Clp protease [Roseovarius sp.
TM1035]
Length = 210
Score = 261 bits (667), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 115/192 (59%), Positives = 158/192 (82%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E +SRGERAYDIFSRLLKERII ++GP++D + ++VAQLL LE+ENPSK I
Sbjct: 11 TLVPMVVEQTSRGERAYDIFSRLLKERIIFLSGPVHDGMSSLIVAQLLHLEAENPSKEIS 70
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
MY+NSPGG VT+GL+IYDTMQYI+ ++T+ +GQAASMGSLLL +G G R +LPNS +M
Sbjct: 71 MYINSPGGVVTSGLSIYDTMQYIKPKVSTLVVGQAASMGSLLLTAGEPGMRFSLPNSRVM 130
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
+HQPSGGY GQA D+ IH ++ ++ D LN +Y KHTGQ+++ +++ ++RD FM+PEEAK
Sbjct: 131 VHQPSGGYQGQATDIMIHARETQKLKDRLNEIYVKHTGQTLKKVEEALERDNFMSPEEAK 190
Query: 213 EFGIIDEVIDQR 224
+G+IDE++ R
Sbjct: 191 AWGLIDEIVANR 202
>gi|222100864|ref|YP_002535432.1| ATP-dependent Clp protease proteolytic subunit [Thermotoga
neapolitana DSM 4359]
gi|221573254|gb|ACM24066.1| ATP-dependent Clp protease proteolytic subunit [Thermotoga
neapolitana DSM 4359]
Length = 200
Score = 261 bits (667), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 116/190 (61%), Positives = 157/190 (82%)
Query: 35 IPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHMY 94
+P+V+E + R ERAYDIFSRLLK+RI+ + PI+D A++V+AQLLFLE+E+P K +++Y
Sbjct: 11 VPIVVESTGRYERAYDIFSRLLKDRIVFLGSPIDDHVANLVIAQLLFLEAEDPDKDVYLY 70
Query: 95 LNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMIH 154
+NSPGG VTAGLAIYDTMQYI+ ++TIC+GQAASM ++LLA+GTKG+R ALPN+ IMIH
Sbjct: 71 INSPGGSVTAGLAIYDTMQYIKCDVSTICVGQAASMAAVLLAAGTKGKRYALPNARIMIH 130
Query: 155 QPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKEF 214
QP GG G AKD+ I T++++R+ D LN + KHTGQ IE I+K+ DRD+FM+ EEAKE+
Sbjct: 131 QPLGGAEGPAKDVEIITRELLRIKDLLNRILSKHTGQPIEKIEKDTDRDFFMSAEEAKEY 190
Query: 215 GIIDEVIDQR 224
GI+D+V+ R
Sbjct: 191 GIVDKVVSSR 200
>gi|241696180|ref|XP_002411835.1| ATP-dependent Clp protease, proteolytic subunit, putative [Ixodes
scapularis]
gi|215504758|gb|EEC14252.1| ATP-dependent Clp protease, proteolytic subunit, putative [Ixodes
scapularis]
gi|442758961|gb|JAA71639.1| Putative atp-dependent clp protease proteolytic subunit [Ixodes
ricinus]
Length = 235
Score = 261 bits (667), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 122/198 (61%), Positives = 153/198 (77%)
Query: 28 SARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENP 87
S R LIP+VIE + RGERAYDI+SRLLKERI+C+ GPI D+ + +VVAQLLFL+SE+
Sbjct: 29 SRRLNPLIPIVIEQTGRGERAYDIYSRLLKERIVCVMGPITDELSSLVVAQLLFLQSESN 88
Query: 88 SKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALP 147
KP+HMY+NSPGG VTAGL IYDTMQYI PI+T C+GQA S GSLLL +GT G R +LP
Sbjct: 89 KKPVHMYINSPGGSVTAGLGIYDTMQYIMPPISTWCIGQACSAGSLLLCAGTAGMRHSLP 148
Query: 148 NSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMT 207
+S IMIHQPSG SGQA D+ IH ++I+ + +N +Y KHT Q +E I+ M+RD FM+
Sbjct: 149 HSRIMIHQPSGQASGQATDIQIHAEEILHLKRVINGMYAKHTKQPLETIESAMERDRFMS 208
Query: 208 PEEAKEFGIIDEVIDQRP 225
E+AKEFGIID V++ P
Sbjct: 209 AEQAKEFGIIDVVLEHPP 226
>gi|85707624|ref|ZP_01038690.1| ATP-dependent Clp protease [Erythrobacter sp. NAP1]
gi|85689158|gb|EAQ29161.1| ATP-dependent Clp protease [Erythrobacter sp. NAP1]
Length = 235
Score = 261 bits (667), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 117/193 (60%), Positives = 154/193 (79%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+P V+E SSRGERA+DIFSRLL+ERI+ + G + D A ++VAQLLFLESENPSKPI
Sbjct: 26 ALVPTVVEQSSRGERAFDIFSRLLRERIVFVTGQVEDTMASLIVAQLLFLESENPSKPIS 85
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
MY+NSPGG VTAG+AI+DTMQYI+ ++T+C+GQAASMGS LLA+G G R ALPN+ IM
Sbjct: 86 MYINSPGGVVTAGMAIHDTMQYIKPRVSTVCIGQAASMGSFLLAAGEPGMRVALPNARIM 145
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
+HQPSGG G A D+ I ++I+R+ +N LY K+TGQS++ I+K MDRD F+ EEA
Sbjct: 146 VHQPSGGARGMASDIEIQAREILRIRSRMNDLYVKYTGQSLDEIEKAMDRDTFLEAEEAM 205
Query: 213 EFGIIDEVIDQRP 225
+FG++D+V + RP
Sbjct: 206 KFGLVDKVFETRP 218
>gi|165971139|gb|AAI58370.1| clpp protein [Xenopus (Silurana) tropicalis]
Length = 228
Score = 261 bits (667), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 120/192 (62%), Positives = 155/192 (80%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
L+P+V+E + RGERAYDI+SRLL+ERIIC+ GPI+D + +VVAQLLFL+SE+ KPIHM
Sbjct: 15 LVPIVVEQTGRGERAYDIYSRLLRERIICVMGPIDDSLSSLVVAQLLFLQSESNKKPIHM 74
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VTAGLAIYDTMQYI +PI T C+GQAASMGSLLLA+G+ G R +LPNS IMI
Sbjct: 75 YINSPGGSVTAGLAIYDTMQYILNPICTWCVGQAASMGSLLLAAGSSGMRHSLPNSRIMI 134
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQPSGG GQA D+ I ++I+++ +N +Y KHT Q + VI+ M+RD +M+P EA+E
Sbjct: 135 HQPSGGARGQATDIAIQAEEILKLKKQINEIYAKHTRQPLSVIESVMERDRYMSPTEAQE 194
Query: 214 FGIIDEVIDQRP 225
FGI+D+V+ P
Sbjct: 195 FGILDKVLVHPP 206
>gi|301622698|ref|XP_002940664.1| PREDICTED: putative ATP-dependent Clp protease proteolytic subunit,
mitochondrial [Xenopus (Silurana) tropicalis]
Length = 247
Score = 261 bits (667), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 120/192 (62%), Positives = 155/192 (80%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
L+P+V+E + RGERAYDI+SRLL+ERIIC+ GPI+D + +VVAQLLFL+SE+ KPIHM
Sbjct: 34 LVPIVVEQTGRGERAYDIYSRLLRERIICVMGPIDDSLSSLVVAQLLFLQSESNKKPIHM 93
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VTAGLAIYDTMQYI +PI T C+GQAASMGSLLLA+G+ G R +LPNS IMI
Sbjct: 94 YINSPGGSVTAGLAIYDTMQYILNPICTWCVGQAASMGSLLLAAGSSGMRHSLPNSRIMI 153
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQPSGG GQA D+ I ++I+++ +N +Y KHT Q + VI+ M+RD +M+P EA+E
Sbjct: 154 HQPSGGARGQATDIAIQAEEILKLKKQINEIYAKHTRQPLSVIESVMERDRYMSPTEAQE 213
Query: 214 FGIIDEVIDQRP 225
FGI+D+V+ P
Sbjct: 214 FGILDKVLVHPP 225
>gi|350572241|ref|ZP_08940546.1| ATP-dependent Clp protease, protease subunit [Neisseria wadsworthii
9715]
gi|349790497|gb|EGZ44406.1| ATP-dependent Clp protease, protease subunit [Neisseria wadsworthii
9715]
Length = 212
Score = 261 bits (667), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 117/198 (59%), Positives = 160/198 (80%), Gaps = 2/198 (1%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+LIP VIE S RGERA+DI+SRLLKERI+ + GP+ND TA++VVAQ+LFLESENP K I+
Sbjct: 9 TLIPTVIEQSGRGERAFDIYSRLLKERIVFLVGPVNDHTANLVVAQMLFLESENPDKDIY 68
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
Y+NSPGG VTAG++I+DTM +++ ++T+CLGQAASMG+ LL++GTKG+R ALPNS IM
Sbjct: 69 FYINSPGGSVTAGMSIFDTMNFVKPDVSTLCLGQAASMGAFLLSAGTKGKRFALPNSRIM 128
Query: 153 IHQP--SGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEE 210
IHQP SGG GQA D+ IH ++++++ + LN KHTGQ +E ++++ DRD FM+ E
Sbjct: 129 IHQPLISGGLGGQASDIEIHARELIKIKEKLNYFLAKHTGQPLEKVERDTDRDNFMSAEA 188
Query: 211 AKEFGIIDEVIDQRPMAL 228
AKE+G+ID+VI+ R A+
Sbjct: 189 AKEYGLIDQVIENREDAV 206
>gi|390449294|ref|ZP_10234903.1| ATP-dependent Clp protease proteolytic subunit [Nitratireductor
aquibiodomus RA22]
gi|389664399|gb|EIM75894.1| ATP-dependent Clp protease proteolytic subunit [Nitratireductor
aquibiodomus RA22]
Length = 210
Score = 261 bits (667), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 118/194 (60%), Positives = 153/194 (78%)
Query: 31 SFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKP 90
+ +L+PMV+E ++RGERAYDIFSRLLKERII I GPI D A +V AQLLFLE+ENP K
Sbjct: 8 AMNLVPMVVEQTNRGERAYDIFSRLLKERIIFITGPIEDGMASLVCAQLLFLEAENPKKE 67
Query: 91 IHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNST 150
I +Y+NSPGG VT+G+AIYDTMQ+I+ P++T+C+GQAASMGSLLL +G K R A PN+
Sbjct: 68 IALYINSPGGVVTSGMAIYDTMQFIQPPVSTLCIGQAASMGSLLLCAGHKDMRLATPNAR 127
Query: 151 IMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEE 210
IM+HQPSGG+ GQA D+ H + I+++ LN +Y KHTGQ E I+K +DRD+FMT +E
Sbjct: 128 IMVHQPSGGFQGQASDIERHAQDIIKLKRRLNEVYVKHTGQDYETIEKTLDRDHFMTSDE 187
Query: 211 AKEFGIIDEVIDQR 224
A FG+ID+V+ R
Sbjct: 188 ALSFGLIDKVVSSR 201
>gi|339320059|ref|YP_004679754.1| ATP-dependent Clp protease proteolytic subunit [Candidatus
Midichloria mitochondrii IricVA]
gi|338226184|gb|AEI89068.1| ATP-dependent Clp protease proteolytic subunit [Candidatus
Midichloria mitochondrii IricVA]
Length = 216
Score = 261 bits (667), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 115/195 (58%), Positives = 156/195 (80%)
Query: 32 FSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPI 91
S++P+VIE SS+ ERA+DI+SRLL++ I+ +NGPI D+ A ++VAQLLFLESENP K I
Sbjct: 1 MSVVPIVIEQSSKAERAFDIYSRLLRDGIVFVNGPIEDNMAAIIVAQLLFLESENPDKDI 60
Query: 92 HMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTI 151
+MY+NSPGG VTAG++IYDTMQY++ + T+C+GQA SMGS+LLA G G R +LPNS I
Sbjct: 61 YMYINSPGGVVTAGMSIYDTMQYVKPRVATVCMGQACSMGSMLLAGGEPGMRYSLPNSRI 120
Query: 152 MIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEA 211
MIHQP GGY GQA D+ IH +I+R+ +N LY KHTGQ ++ I+K ++RD FM+ EA
Sbjct: 121 MIHQPHGGYRGQATDIEIHANEILRIKHNMNLLYVKHTGQPLKEIEKRIERDSFMSASEA 180
Query: 212 KEFGIIDEVIDQRPM 226
K+FG+ID++I++RP
Sbjct: 181 KKFGLIDDIIEKRPF 195
>gi|254294162|ref|YP_003060185.1| endopeptidase Clp [Hirschia baltica ATCC 49814]
gi|254042693|gb|ACT59488.1| Endopeptidase Clp [Hirschia baltica ATCC 49814]
Length = 206
Score = 261 bits (667), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 121/197 (61%), Positives = 152/197 (77%)
Query: 31 SFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKP 90
+ +L+PMV+E SSRGERAYDIFSRLLKERII + GPI D A ++ AQLLFLESENP K
Sbjct: 8 AMNLVPMVVEQSSRGERAYDIFSRLLKERIIFVTGPIEDGMATLITAQLLFLESENPKKE 67
Query: 91 IHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNST 150
I MY+NSPGG V++GLAIYDTMQYI +P++T C+G AASMGSLLLA+G K R A PN+
Sbjct: 68 ISMYINSPGGVVSSGLAIYDTMQYISAPVSTACIGMAASMGSLLLAAGEKDMRFATPNAR 127
Query: 151 IMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEE 210
IM+HQPSGGY G A D+ H ++I+ + LN +Y HTGQS E I++ +DRD FMT +
Sbjct: 128 IMVHQPSGGYRGVASDIERHAEEILEIKRNLNNIYVNHTGQSYEAIEQKLDRDSFMTSAQ 187
Query: 211 AKEFGIIDEVIDQRPMA 227
A EFGIID V ++R ++
Sbjct: 188 AVEFGIIDRVFEKRAVS 204
>gi|21230439|ref|NP_636356.1| ATP-dependent Clp protease proteolytic subunit [Xanthomonas
campestris pv. campestris str. ATCC 33913]
gi|66769567|ref|YP_244329.1| ATP-dependent Clp protease proteolytic subunit [Xanthomonas
campestris pv. campestris str. 8004]
gi|25008306|sp|Q8PBY6.1|CLPP_XANCP RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|81304478|sp|Q4URL4.1|CLPP_XANC8 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|21112001|gb|AAM40280.1| ATP-dependent Clp protease proteolytic subunit [Xanthomonas
campestris pv. campestris str. ATCC 33913]
gi|66574899|gb|AAY50309.1| ATP-dependent Clp protease proteolytic subunit [Xanthomonas
campestris pv. campestris str. 8004]
Length = 208
Score = 261 bits (667), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 116/199 (58%), Positives = 160/199 (80%)
Query: 27 ISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESEN 86
I ++ +L+PMV+E +SRGERAYDI+SRLLKER+I + GPI+D A+V+VAQLLFLE++N
Sbjct: 3 IVTKALNLVPMVVEQTSRGERAYDIYSRLLKERLIFLVGPIDDHMANVIVAQLLFLEADN 62
Query: 87 PSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRAL 146
P K I +Y+NSPGG VTAG+AIYDTMQYI+ ++TIC+GQAASMG+LLLASG G+R AL
Sbjct: 63 PEKDISIYINSPGGVVTAGMAIYDTMQYIKPDVSTICVGQAASMGALLLASGAAGKRYAL 122
Query: 147 PNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFM 206
PNS +MIHQP GG+ GQA D+ IH ++I+ + LN + KHTGQS+E I ++ +RD F
Sbjct: 123 PNSRVMIHQPLGGFQGQATDIDIHAREILTLRSRLNEILAKHTGQSLETIARDTERDNFK 182
Query: 207 TPEEAKEFGIIDEVIDQRP 225
+ +A+ +G++D V+++RP
Sbjct: 183 SAVDAQAYGLVDHVLERRP 201
>gi|383501651|ref|YP_005415010.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia
australis str. Cutlack]
gi|378932662|gb|AFC71167.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia
australis str. Cutlack]
Length = 201
Score = 261 bits (667), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 121/193 (62%), Positives = 154/193 (79%)
Query: 32 FSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPI 91
S +P+VIE +SRGERAYDI+SRLLKERII + I D A+++VAQLLFLE+ENP K I
Sbjct: 1 MSHVPIVIEQTSRGERAYDIYSRLLKERIIFVCSTIEDHMANLIVAQLLFLEAENPKKDI 60
Query: 92 HMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTI 151
+MY+NSPGG VTAGLAIYDTMQYI+ + T+C+GQA SMGS LL GT+G R +LP+S I
Sbjct: 61 YMYINSPGGVVTAGLAIYDTMQYIKPKVATLCIGQACSMGSFLLCGGTQGMRYSLPHSRI 120
Query: 152 MIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEA 211
MIHQPSGGY GQA D+ IH ++ +++ LN LY K+TGQ ++ I+K+M+RD FM+PEEA
Sbjct: 121 MIHQPSGGYKGQATDIEIHAQETLKIKRLLNELYSKNTGQELKHIEKSMERDNFMSPEEA 180
Query: 212 KEFGIIDEVIDQR 224
K+FGIID +I R
Sbjct: 181 KKFGIIDNIISSR 193
>gi|115374393|ref|ZP_01461676.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Stigmatella
aurantiaca DW4/3-1]
gi|310824399|ref|YP_003956757.1| ATP-dependent CLP protease proteolytic subunit 2 [Stigmatella
aurantiaca DW4/3-1]
gi|115368595|gb|EAU67547.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Stigmatella
aurantiaca DW4/3-1]
gi|309397471|gb|ADO74930.1| ATP-dependent Clp protease proteolytic subunit 2 [Stigmatella
aurantiaca DW4/3-1]
Length = 200
Score = 261 bits (667), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 119/187 (63%), Positives = 156/187 (83%)
Query: 35 IPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHMY 94
IP VIE S RGERAYD++SRLLK+RII + PIND+ A+VVVAQ+LFLESE+P K I++Y
Sbjct: 3 IPFVIETSHRGERAYDLYSRLLKDRIIMLGVPINDEVANVVVAQMLFLESEDPEKGINIY 62
Query: 95 LNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMIH 154
+NSPGG VTAGLAIYDTMQY++ P++TIC+GQAASMG+LLL +G+KG+R ALPN+ IMIH
Sbjct: 63 INSPGGSVTAGLAIYDTMQYVKCPVSTICVGQAASMGALLLLAGSKGKRYALPNARIMIH 122
Query: 155 QPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKEF 214
QP GG GQA D+ I K+I+R+ LN + KHTG +IE I+K+ +RDYFM+ ++A+++
Sbjct: 123 QPLGGAQGQATDIDIQAKEILRLKAYLNGIIVKHTGHTIERIEKDTERDYFMSADDARQY 182
Query: 215 GIIDEVI 221
GIIDEV+
Sbjct: 183 GIIDEVV 189
>gi|325294216|ref|YP_004280730.1| ATP-dependent Clp protease proteolytic subunit [Desulfurobacterium
thermolithotrophum DSM 11699]
gi|325064664|gb|ADY72671.1| ATP-dependent Clp protease proteolytic subunit [Desulfurobacterium
thermolithotrophum DSM 11699]
Length = 200
Score = 261 bits (667), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 117/191 (61%), Positives = 158/191 (82%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
+P+VIE + RGERAYDI+SRLLK+RII + PI+D A+++VAQLLFLE+E+P K I++
Sbjct: 8 FVPIVIEQTGRGERAYDIYSRLLKDRIIMLGTPIDDHVANLIVAQLLFLEAEDPEKDIYL 67
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VTAGLAIYDTMQYI+ + TICLGQAASMG++LLA+G KG+R ALP++ IMI
Sbjct: 68 YINSPGGVVTAGLAIYDTMQYIKPDVVTICLGQAASMGAVLLAAGAKGKRFALPHARIMI 127
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQP GG+ GQA D+ IH K+I+R+ LN + KHTGQS+ I+K+ +RDYFM+ EEA++
Sbjct: 128 HQPLGGFQGQATDIEIHAKEILRLKKMLNEILSKHTGQSLRKIEKDTERDYFMSAEEAQK 187
Query: 214 FGIIDEVIDQR 224
+G+ID+V+ +R
Sbjct: 188 YGLIDKVLTRR 198
>gi|323449375|gb|EGB05263.1| hypothetical protein AURANDRAFT_31167 [Aureococcus anophagefferens]
Length = 194
Score = 261 bits (667), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 119/191 (62%), Positives = 152/191 (79%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
++PMVIE SSRGERA+DI+SRLLKERII +NGP++D+ A VV AQLLFLESE+P+ PI M
Sbjct: 1 MVPMVIERSSRGERAFDIYSRLLKERIIILNGPVHDELASVVTAQLLFLESEDPTSPISM 60
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VTAGLAIYDTMQYI+ + T+C+GQAASMGSLLLA+G G RRALPN+ IM+
Sbjct: 61 YINSPGGVVTAGLAIYDTMQYIQPAVATLCMGQAASMGSLLLAAGADGMRRALPNAQIML 120
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQPSGG GQA D+ I K+I++ LN +Y HT + + ++K MDRD + T +EA +
Sbjct: 121 HQPSGGAQGQASDIAIVAKEILKTRAKLNDIYVHHTKKPLADVEKVMDRDSYFTAQEAMD 180
Query: 214 FGIIDEVIDQR 224
FG++DEV+ R
Sbjct: 181 FGVVDEVVHPR 191
>gi|352085686|ref|ZP_08953277.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Rhodanobacter
sp. 2APBS1]
gi|389798002|ref|ZP_10201030.1| ATP-dependent Clp protease proteolytic subunit [Rhodanobacter sp.
116-2]
gi|351681627|gb|EHA64751.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Rhodanobacter
sp. 2APBS1]
gi|388445897|gb|EIM01950.1| ATP-dependent Clp protease proteolytic subunit [Rhodanobacter sp.
116-2]
Length = 209
Score = 261 bits (666), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 114/195 (58%), Positives = 159/195 (81%)
Query: 30 RSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSK 89
++ +L+PMV+E ++RGER+YDI+SRLLKER+I + G +ND A+++VAQ+LFLESENP K
Sbjct: 7 QNLNLVPMVVEQTARGERSYDIYSRLLKERVIFLVGEVNDQVANLIVAQMLFLESENPDK 66
Query: 90 PIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNS 149
I+ Y+NSPGG VTAGLAIYDTMQ+I+ ++T+C+GQA SMGS LL +G KG+R ALPNS
Sbjct: 67 DINFYINSPGGAVTAGLAIYDTMQFIKPNVSTMCIGQACSMGSFLLMAGAKGKRFALPNS 126
Query: 150 TIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPE 209
+MIHQPSGG GQA D+ I ++I+ + + LN LY +HTGQ++E I+ +M+RD FM+
Sbjct: 127 RVMIHQPSGGAQGQATDIEIQAREILYIRERLNKLYVQHTGQTLEKIELDMERDRFMSAA 186
Query: 210 EAKEFGIIDEVIDQR 224
+AK +G+IDEV+D+R
Sbjct: 187 DAKAYGLIDEVLDKR 201
>gi|424795846|ref|ZP_18221654.1| ATP-dependent Clp protease [Xanthomonas translucens pv. graminis
ART-Xtg29]
gi|433679138|ref|ZP_20510914.1| ATP-dependent Clp protease proteolytic subunit [Xanthomonas
translucens pv. translucens DSM 18974]
gi|440731335|ref|ZP_20911360.1| ATP-dependent Clp protease proteolytic subunit [Xanthomonas
translucens DAR61454]
gi|422795260|gb|EKU23983.1| ATP-dependent Clp protease [Xanthomonas translucens pv. graminis
ART-Xtg29]
gi|430815742|emb|CCP41464.1| ATP-dependent Clp protease proteolytic subunit [Xanthomonas
translucens pv. translucens DSM 18974]
gi|440373297|gb|ELQ10056.1| ATP-dependent Clp protease proteolytic subunit [Xanthomonas
translucens DAR61454]
Length = 208
Score = 261 bits (666), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 114/196 (58%), Positives = 161/196 (82%)
Query: 30 RSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSK 89
++ +L+PMV+E +SRGERAYDI+SRLLKER+I + GPI+D A+V+VAQ+LFLE++NP K
Sbjct: 6 KALNLVPMVVEQTSRGERAYDIYSRLLKERLIFLVGPIDDHMANVIVAQMLFLEADNPEK 65
Query: 90 PIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNS 149
I++Y+NSPGG VTAG+AIYDTMQYI+ ++TIC+GQAASMG+LLLASG G+R ALPNS
Sbjct: 66 DINIYINSPGGVVTAGMAIYDTMQYIKPDVSTICIGQAASMGALLLASGAAGKRYALPNS 125
Query: 150 TIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPE 209
+MIHQP GG+ GQA D+ IH ++I+ + LN + KHTGQS+E I ++ +RD F +
Sbjct: 126 RVMIHQPLGGFQGQATDIDIHAREILTLRSRLNEILAKHTGQSLETIARDTERDNFKSAV 185
Query: 210 EAKEFGIIDEVIDQRP 225
+A+ +G++D+V+++RP
Sbjct: 186 DAQAYGLVDQVLERRP 201
>gi|150016209|ref|YP_001308463.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
beijerinckii NCIMB 8052]
gi|149902674|gb|ABR33507.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
beijerinckii NCIMB 8052]
Length = 199
Score = 261 bits (666), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 114/189 (60%), Positives = 159/189 (84%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E +SRGER+YDIFSRLLKERII ++G +NDD+A+++VAQLLFLESE+P K I+
Sbjct: 2 ALVPMVVEQTSRGERSYDIFSRLLKERIIMLSGEVNDDSANLIVAQLLFLESEDPDKDIY 61
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
+Y+NSPGG +TAG AIYDTMQYI+ ++TIC+G AASMG+ LL+SGTKG+R ALPN+ +M
Sbjct: 62 IYINSPGGSITAGNAIYDTMQYIKCDVSTICIGMAASMGAFLLSSGTKGKRFALPNAEVM 121
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQP GG+ GQA D IH K+I+++ + LN + ++TG+ +E I+ +++RD FM+ EEAK
Sbjct: 122 IHQPLGGFQGQATDFEIHAKRILKMKETLNRILSENTGKPLETIKADVERDNFMSAEEAK 181
Query: 213 EFGIIDEVI 221
+G++DEVI
Sbjct: 182 AYGLVDEVI 190
>gi|442319289|ref|YP_007359310.1| ATP-dependent Clp protease proteolytic subunit [Myxococcus
stipitatus DSM 14675]
gi|441486931|gb|AGC43626.1| ATP-dependent Clp protease proteolytic subunit [Myxococcus
stipitatus DSM 14675]
Length = 206
Score = 261 bits (666), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 124/208 (59%), Positives = 163/208 (78%), Gaps = 4/208 (1%)
Query: 32 FSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPI 91
F +P VIE + RGER+YDI+SRLLK+RII + I+DD A+V+VAQLLFLESE+P K I
Sbjct: 3 FMPVPYVIEQTHRGERSYDIYSRLLKDRIIMLGTEIDDDVANVIVAQLLFLESEDPDKDI 62
Query: 92 HMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTI 151
++Y+NSPGG VTAG+AIYDTMQY++ P++TIC+GQAASMG++LL +GTKG+R ALP+S I
Sbjct: 63 NIYINSPGGSVTAGMAIYDTMQYVKPPVSTICVGQAASMGAVLLLAGTKGKRYALPSSRI 122
Query: 152 MIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEA 211
MIHQP GG GQA D+ I K+I+R+ LN L KHTGQSIE ++K+ DRDYFM EA
Sbjct: 123 MIHQPLGGVRGQATDIEIQAKEILRMKAKLNELIVKHTGQSIERVEKDTDRDYFMGATEA 182
Query: 212 KEFGIIDEVIDQRPMALVTDAVGREGKE 239
K +GI+DE+ Q P +V +G++ K+
Sbjct: 183 KAYGIVDEI--QNPRKVV--GLGKDDKK 206
>gi|302673690|ref|XP_003026531.1| hypothetical protein SCHCODRAFT_86223 [Schizophyllum commune H4-8]
gi|300100214|gb|EFI91628.1| hypothetical protein SCHCODRAFT_86223 [Schizophyllum commune H4-8]
Length = 245
Score = 261 bits (666), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 125/220 (56%), Positives = 167/220 (75%), Gaps = 8/220 (3%)
Query: 14 ATKFLQLSKPSA-QISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTA 72
A+K ++ P A Q S +L+PMVIE + RGER+YDIFSRLL+ER++ + GPI D +
Sbjct: 22 ASKGIRRFHPLAGQWDPPSANLVPMVIEQTGRGERSYDIFSRLLRERVVMLYGPIRDTDS 81
Query: 73 HVVVAQLLFLESENPSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGS 132
++V+QLLFLE+E SKPIH+Y+NSPGG VTAGLAIYDTMQY+ SPI+T C+G AASMGS
Sbjct: 82 ALIVSQLLFLEAEETSKPIHLYINSPGGSVTAGLAIYDTMQYVSSPIHTYCIGCAASMGS 141
Query: 133 LLLASGTKGERRALPNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQS 192
LLLA+G KG+R LPN++IMIHQPSGG SGQA D+ IH K+I+RV +AL +Y KH +
Sbjct: 142 LLLAAGEKGKRHCLPNASIMIHQPSGGASGQASDVAIHAKEILRVREALTGIYQKHCAKP 201
Query: 193 IEV-------IQKNMDRDYFMTPEEAKEFGIIDEVIDQRP 225
E ++ ++RDYFMT +EA +FGI+D ++++RP
Sbjct: 202 DESEAEGLARFERALERDYFMTAKEAIDFGIVDGILEKRP 241
>gi|330994049|ref|ZP_08317979.1| ATP-dependent Clp protease proteolytic subunit 1 [Gluconacetobacter
sp. SXCC-1]
gi|347760102|ref|YP_004867663.1| Clp protease proteolytic subunit [Gluconacetobacter xylinus NBRC
3288]
gi|329758995|gb|EGG75509.1| ATP-dependent Clp protease proteolytic subunit 1 [Gluconacetobacter
sp. SXCC-1]
gi|347579072|dbj|BAK83293.1| Clp protease proteolytic subunit [Gluconacetobacter xylinus NBRC
3288]
Length = 213
Score = 261 bits (666), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 116/189 (61%), Positives = 154/189 (81%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E +SRGERA+DI+SRLL+ERII + GP+ D A VV AQLL+LES NP+K I
Sbjct: 15 ALVPMVVEQTSRGERAFDIYSRLLQERIIFLTGPVYDQVAAVVSAQLLYLESVNPTKEIS 74
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
Y+NSPGG V+AGLAIYDTMQYIRSP++T+C+GQAASMGSLLLA G KG R ALPNS +M
Sbjct: 75 FYINSPGGVVSAGLAIYDTMQYIRSPVSTVCIGQAASMGSLLLAGGEKGRRFALPNSRVM 134
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
+HQPSGG GQA D+ I ++I+ + LN +Y +HTG+++E I++ ++RD +M+ EEA+
Sbjct: 135 VHQPSGGAQGQASDIEIQAQEILTIRKRLNEIYNEHTGRTLEEIERKLERDSYMSAEEAQ 194
Query: 213 EFGIIDEVI 221
FGI+DEV+
Sbjct: 195 AFGIVDEVV 203
>gi|254514393|ref|ZP_05126454.1| ATP-dependent Clp protease, proteolytic subunit ClpP [gamma
proteobacterium NOR5-3]
gi|219676636|gb|EED33001.1| ATP-dependent Clp protease, proteolytic subunit ClpP [gamma
proteobacterium NOR5-3]
Length = 213
Score = 261 bits (666), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 116/197 (58%), Positives = 157/197 (79%)
Query: 28 SARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENP 87
S +S L+PMV+E +SRGER+YDI+SRLLKER++ + G + D A+++VAQLLFLESENP
Sbjct: 11 SVQSLGLVPMVVEQTSRGERSYDIYSRLLKERVVFVVGQVEDHMANLIVAQLLFLESENP 70
Query: 88 SKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALP 147
K IH+Y+NSPGG VTAGL+IYDTMQ+I+ I+T+CLGQAASMG+ LL+ GTKG+R LP
Sbjct: 71 DKDIHLYINSPGGSVTAGLSIYDTMQFIKPDISTMCLGQAASMGAFLLSGGTKGKRYCLP 130
Query: 148 NSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMT 207
N+ MIHQPSGG GQA D+ I K+I+ + + LN L +HTGQ +EVI+++ +RD FM
Sbjct: 131 NARTMIHQPSGGAQGQATDIDIQAKEILIIRERLNRLMAEHTGQPLEVIERDTERDRFMD 190
Query: 208 PEEAKEFGIIDEVIDQR 224
E++KE+G++DEV+ R
Sbjct: 191 AEQSKEYGLVDEVVTAR 207
>gi|384921302|ref|ZP_10021287.1| ATP-dependent Clp protease proteolytic subunit [Citreicella sp.
357]
gi|384464817|gb|EIE49377.1| ATP-dependent Clp protease proteolytic subunit [Citreicella sp.
357]
Length = 210
Score = 261 bits (666), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 115/192 (59%), Positives = 160/192 (83%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E +SRGERAYDIFSRLLKERII ++GP++D + ++VAQLL LE+ENPSK I
Sbjct: 11 TLVPMVVEQTSRGERAYDIFSRLLKERIIFVSGPVHDGMSSLIVAQLLHLEAENPSKEIS 70
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
MY+NSPGG VT+GL+IYDTMQYI+ ++T+ +GQAASMGSLLLA+G G R +LPNS IM
Sbjct: 71 MYINSPGGVVTSGLSIYDTMQYIKPKVSTLVIGQAASMGSLLLAAGESGMRFSLPNSRIM 130
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
+HQPSGGY GQA D+ IH ++ +++ LN +Y KH G+++E ++K ++RD FM+PE+AK
Sbjct: 131 VHQPSGGYQGQATDIMIHAEETLKLKRRLNEIYVKHCGRTLEEVEKALERDNFMSPEDAK 190
Query: 213 EFGIIDEVIDQR 224
+G+IDE++++R
Sbjct: 191 AWGLIDEIVEKR 202
>gi|284097335|ref|ZP_06385465.1| Peptidase S14, ClpP [Candidatus Poribacteria sp. WGA-A3]
gi|283831154|gb|EFC35134.1| Peptidase S14, ClpP [Candidatus Poribacteria sp. WGA-A3]
Length = 203
Score = 261 bits (666), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 114/188 (60%), Positives = 159/188 (84%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
LIPMVIE ++RGERAYDI+SRLLK+RII + PI+D +++++AQLLFLE+E+P K I++
Sbjct: 2 LIPMVIESTNRGERAYDIYSRLLKDRIIFLGAPIDDIFSNLIIAQLLFLEAEDPEKDINL 61
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VTAG+ IYDTMQY++ PI TICLGQAASMG+LLLA+GT+G+R ALPN+ +MI
Sbjct: 62 YINSPGGSVTAGMGIYDTMQYVKPPITTICLGQAASMGALLLAAGTQGKRHALPNARVMI 121
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQP GG+ GQA ++ IH ++I+++ + LN + +HTGQ++E I ++ +RDYFM+ EAK+
Sbjct: 122 HQPMGGFQGQATEIDIHAREILKIRERLNQILSEHTGQALEKISQDTERDYFMSGTEAKD 181
Query: 214 FGIIDEVI 221
+G+IDEVI
Sbjct: 182 YGLIDEVI 189
>gi|171059225|ref|YP_001791574.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Leptothrix
cholodnii SP-6]
gi|226706459|sp|B1Y6H3.1|CLPP_LEPCP RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|170776670|gb|ACB34809.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Leptothrix
cholodnii SP-6]
Length = 202
Score = 261 bits (666), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 114/199 (57%), Positives = 159/199 (79%)
Query: 27 ISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESEN 86
+ ++ ++P+VIE S RGERAYDI+SRLL+ER+I + GP+ND +A++VVAQLLFLESEN
Sbjct: 4 VETQNLGMVPIVIEQSGRGERAYDIYSRLLRERVIFLVGPVNDQSANLVVAQLLFLESEN 63
Query: 87 PSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRAL 146
P K I Y+NSPGG V+AG++IYDTMQ+I+ ++T+C+G AASMG+ LLA+G KG+R +L
Sbjct: 64 PDKDISFYINSPGGSVSAGMSIYDTMQFIKPQVSTLCMGLAASMGAFLLAAGAKGKRFSL 123
Query: 147 PNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFM 206
PNS IMIHQP GG GQA D+ IH ++I++ + LN + + TGQS+E IQ + +RDYFM
Sbjct: 124 PNSKIMIHQPLGGAQGQATDIEIHAREILKTREQLNRILAERTGQSLEKIQNDTERDYFM 183
Query: 207 TPEEAKEFGIIDEVIDQRP 225
+ EEA+ +G+ID+VI +RP
Sbjct: 184 SSEEAQTYGLIDQVISKRP 202
>gi|406708292|ref|YP_006758644.1| endopeptidase Clp [alpha proteobacterium HIMB59]
gi|406654068|gb|AFS49467.1| endopeptidase Clp [alpha proteobacterium HIMB59]
Length = 196
Score = 261 bits (666), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 119/192 (61%), Positives = 155/192 (80%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+P+VIE S +GER++DIFSRLL+ERII + GPI+D TA ++ AQLLFLESENP +PI
Sbjct: 2 NLVPIVIEQSGKGERSFDIFSRLLRERIIFLTGPIDDQTASLICAQLLFLESENPEEPIS 61
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
+Y+NSPGG VTAGLA+YDT+QYIR P++T+C+GQA+S GSL+LASG G R ALP++ IM
Sbjct: 62 LYINSPGGLVTAGLAMYDTIQYIRCPVHTVCIGQASSAGSLILASGKSGHRYALPHAKIM 121
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQPSGG+SGQA D+ IH ++I++ LN +Y KHT SI I+K M+RD F PEEA
Sbjct: 122 IHQPSGGFSGQATDIKIHAEEILKTKKRLNEIYQKHTNISINEIEKAMERDRFFDPEEAL 181
Query: 213 EFGIIDEVIDQR 224
+FG+ID+VI R
Sbjct: 182 KFGLIDKVITNR 193
>gi|403387723|ref|ZP_10929780.1| ATP-dependent Clp protease proteolytic subunit [Clostridium sp.
JC122]
Length = 194
Score = 261 bits (666), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 116/192 (60%), Positives = 158/192 (82%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
SL+PMV+E +++GER+YDI+SRLLKERII + +N TA ++VAQLLFLESE+P K I+
Sbjct: 2 SLVPMVVEQTNKGERSYDIYSRLLKERIIFLGEEVNSTTASLIVAQLLFLESEDPDKDIY 61
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
+Y+NSPGG +T G+AIYDTM YI+ + TIC G AASMG+ LL+SG KG+R ALPNS IM
Sbjct: 62 LYINSPGGSITDGMAIYDTMNYIKPDVVTICTGLAASMGAFLLSSGAKGKRFALPNSEIM 121
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQP GG+ GQA D+ IH K+I+R+ + LN + ++TG+S+EVI+K+++RDYFM+ EEAK
Sbjct: 122 IHQPLGGFKGQATDIDIHAKRIIRIKETLNEILSENTGKSLEVIKKDVERDYFMSAEEAK 181
Query: 213 EFGIIDEVIDQR 224
E+G+IDEVI ++
Sbjct: 182 EYGLIDEVIIKK 193
>gi|119898362|ref|YP_933575.1| ATP-dependent Clp protease proteolytic subunit [Azoarcus sp. BH72]
gi|166201798|sp|A1K783.1|CLPP_AZOSB RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|119670775|emb|CAL94688.1| Endopeptidase Clp [Azoarcus sp. BH72]
Length = 212
Score = 261 bits (666), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 116/193 (60%), Positives = 155/193 (80%)
Query: 32 FSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPI 91
LIPMV+E S RGER+YDI+SRLLKER++ + GP+ND TA+++VAQLLFLESENP K I
Sbjct: 17 LGLIPMVVEQSGRGERSYDIYSRLLKERVVFLVGPVNDVTANLIVAQLLFLESENPDKDI 76
Query: 92 HMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTI 151
+ Y+NSPGG VTAGLAIYDTMQ+I+ ++T+C+GQAASMG+ LLA+G KG+R LPNS +
Sbjct: 77 YFYINSPGGSVTAGLAIYDTMQFIKPNVSTLCIGQAASMGAFLLAAGEKGKRFCLPNSRV 136
Query: 152 MIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEA 211
MIHQP GG+ GQA D+ IH ++I+ + + LN + KHTGQ+IE I+K+ DRD FM+ A
Sbjct: 137 MIHQPLGGFQGQASDIEIHAREILYLRERLNGMLAKHTGQTIEQIEKDTDRDNFMSATAA 196
Query: 212 KEFGIIDEVIDQR 224
E+G++D+V+ R
Sbjct: 197 VEYGLVDKVLTSR 209
>gi|86749681|ref|YP_486177.1| endopeptidase Clp [Rhodopseudomonas palustris HaA2]
gi|116243157|sp|Q2IWZ4.1|CLPP_RHOP2 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|86572709|gb|ABD07266.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Rhodopseudomonas palustris HaA2]
Length = 212
Score = 261 bits (666), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 116/192 (60%), Positives = 156/192 (81%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E ++RGERAYDIFSRLLKERII + GP+ D + +VVAQLLFLE+ENP K I
Sbjct: 10 NLVPMVVEQTNRGERAYDIFSRLLKERIIFLTGPVEDGMSTLVVAQLLFLEAENPKKEIS 69
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
MY+NSPGG VT+GLAIYDTMQ+IR P++T+C GQAASMGSLLLA+G K R +LPN+ IM
Sbjct: 70 MYINSPGGVVTSGLAIYDTMQFIRPPVSTLCTGQAASMGSLLLAAGHKDMRFSLPNARIM 129
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
+HQPSGG+ GQA D+ +H ++I+ + LN +Y HTGQ+ + I+ ++RD F+T + A+
Sbjct: 130 VHQPSGGFQGQATDIMLHAQEILNLKKRLNEIYVHHTGQTYKAIEDALERDKFLTADMAR 189
Query: 213 EFGIIDEVIDQR 224
+FGI+D+VID+R
Sbjct: 190 DFGIVDKVIDKR 201
>gi|353241475|emb|CCA73288.1| related to endopeptidase Clp [Piriformospora indica DSM 11827]
Length = 240
Score = 261 bits (666), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 128/243 (52%), Positives = 177/243 (72%), Gaps = 23/243 (9%)
Query: 4 MRNLLSRT-----SMATKFLQLSKPSAQISARSFSLIPMVIEHSSRGERAYDIFSRLLKE 58
+R++L RT T+F S SAR +L+P+VIE + RGER+YDI+SRLL+E
Sbjct: 2 LRHVLKRTIESNRGAPTRFFHAS------SARR-TLVPIVIEQTGRGERSYDIYSRLLRE 54
Query: 59 RIICINGPINDDTAHVVVAQLLFLESENPSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSP 118
R+I + GP++D+ + ++VAQLLFLE+E ++PIH+Y+NSPGG VTAG+ IYDT Y+ SP
Sbjct: 55 RVIMLCGPVHDNLSSLIVAQLLFLEAEESTRPIHLYINSPGGSVTAGMGIYDT--YVSSP 112
Query: 119 INTICLGQAASMGSLLLASGTKGERRALPNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVW 178
I+T C+GQAASMGSLLLA+G KG R LPN+T+MIHQPSGG SGQA D++IH K+I+R+
Sbjct: 113 IHTYCVGQAASMGSLLLAAGEKGHRHILPNATVMIHQPSGGASGQASDISIHAKEILRIR 172
Query: 179 DALNALYCKHTGQSIEVI-------QKNMDRDYFMTPEEAKEFGIIDEVIDQRPMALVTD 231
+ L ++Y KH G+ E + +K +DRDYF+T E A EFG+ D ++++RP LVTD
Sbjct: 173 EKLTSIYQKHCGKEGESVEDGVKRFEKALDRDYFLTAEAAVEFGLADTILEKRP--LVTD 230
Query: 232 AVG 234
G
Sbjct: 231 GTG 233
>gi|260887080|ref|ZP_05898343.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Selenomonas
sputigena ATCC 35185]
gi|330839143|ref|YP_004413723.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Selenomonas
sputigena ATCC 35185]
gi|402833991|ref|ZP_10882598.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Selenomonas sp. CM52]
gi|260863142|gb|EEX77642.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Selenomonas
sputigena ATCC 35185]
gi|329746907|gb|AEC00264.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Selenomonas
sputigena ATCC 35185]
gi|402279060|gb|EJU28103.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Selenomonas sp. CM52]
Length = 206
Score = 261 bits (666), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 124/196 (63%), Positives = 157/196 (80%), Gaps = 1/196 (0%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
S +PMV+E S+RGERAYDI+SRLLK+RI+ + GPI+D+ A+VVVAQLLFLESE+P K IH
Sbjct: 7 SYVPMVVERSNRGERAYDIYSRLLKDRIVFVGGPIDDNVANVVVAQLLFLESEDPDKDIH 66
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
+Y+NSPGG VTAGLAIYDTMQYIR ++TIC+GQAASMGSLLL +G KG+R ALP + IM
Sbjct: 67 LYINSPGGVVTAGLAIYDTMQYIRPDVSTICIGQAASMGSLLLTAGAKGKRYALPLARIM 126
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQP GG GQ+ D+ I K+I+R+ + N + KHTGQ E + + +RD FMT EEAK
Sbjct: 127 IHQPLGGAQGQSTDIQIQAKEILRLREVGNDILAKHTGQPREKLIADTERDNFMTAEEAK 186
Query: 213 EFGIIDEVIDQRPMAL 228
E+G+IDEVI RP+ +
Sbjct: 187 EYGLIDEVI-TRPVKI 201
>gi|399992448|ref|YP_006572688.1| ATP-dependent Clp protease proteolytic subunit [Phaeobacter
gallaeciensis DSM 17395 = CIP 105210]
gi|398657003|gb|AFO90969.1| ATP-dependent Clp protease proteolytic subunit [Phaeobacter
gallaeciensis DSM 17395 = CIP 105210]
Length = 210
Score = 261 bits (666), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 115/192 (59%), Positives = 156/192 (81%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E +SRGERAYDIFSRLLKERII +NGP++D + ++VAQLL LE+ENPSK I
Sbjct: 11 TLVPMVVEQTSRGERAYDIFSRLLKERIIFLNGPVHDGMSSLIVAQLLHLEAENPSKEIS 70
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
MY+NSPGG VT+GL+IYDTMQYI+ ++T+ +GQAASMGSLLL +G G R +LPNS +M
Sbjct: 71 MYINSPGGVVTSGLSIYDTMQYIKPKVSTLVIGQAASMGSLLLTAGEAGMRFSLPNSRVM 130
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
+HQPSGG+ GQA D+ IH ++ +++ LN +Y KHTGQ + I ++RD FM+PE+AK
Sbjct: 131 VHQPSGGFQGQATDIMIHAEETLKLKKRLNEIYVKHTGQEYDKIVDALERDNFMSPEDAK 190
Query: 213 EFGIIDEVIDQR 224
+FG+IDE+++ R
Sbjct: 191 DFGLIDEIVENR 202
>gi|262277075|ref|ZP_06054868.1| ATP-dependent Clp protease, proteolytic subunit ClpP [alpha
proteobacterium HIMB114]
gi|262224178|gb|EEY74637.1| ATP-dependent Clp protease, proteolytic subunit ClpP [alpha
proteobacterium HIMB114]
Length = 204
Score = 261 bits (666), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 116/192 (60%), Positives = 157/192 (81%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMVIE + RGER++DI+SRLLKERII + GPIN + +V AQLLFLESEN SK I+
Sbjct: 11 TLVPMVIEQTPRGERSFDIYSRLLKERIIFLTGPINSYISSLVSAQLLFLESENNSKEIY 70
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
+Y+NSPGG VT GLAIYDTMQ+I+ ++T+C+GQAASMGS LLA+G KG R +LPN+ IM
Sbjct: 71 LYINSPGGVVTDGLAIYDTMQFIKPTVSTLCIGQAASMGSFLLAAGEKGLRMSLPNARIM 130
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
+HQPS G+ GQA D+ IHTK+I+ LN +Y KHTGQ++E I++ ++RD FM+ EEAK
Sbjct: 131 VHQPSAGFQGQATDIEIHTKEILSTKKRLNEIYSKHTGQTVETIKEALERDNFMSAEEAK 190
Query: 213 EFGIIDEVIDQR 224
+FG++D+V+++R
Sbjct: 191 KFGLVDKVVEKR 202
>gi|395326377|gb|EJF58787.1| hypothetical protein DICSQDRAFT_156575, partial [Dichomitus
squalens LYAD-421 SS1]
Length = 257
Score = 261 bits (666), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 121/199 (60%), Positives = 156/199 (78%), Gaps = 7/199 (3%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+P+VIE + RGER+YDIFSRLL+ER+I + GPI D + ++VAQLLFLE+E SKPIH
Sbjct: 53 NLVPIVIEQTGRGERSYDIFSRLLRERVIMLYGPIRDTDSALIVAQLLFLEAEETSKPIH 112
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
+Y+NSPGG VTAGLAIYDTMQY+ SPI+T C+GQA SMGSLLLA+G K +R ALP+S+IM
Sbjct: 113 VYINSPGGSVTAGLAIYDTMQYVSSPIHTYCVGQACSMGSLLLAAGEKSKRHALPHSSIM 172
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKN-------MDRDYF 205
IHQPSGG SGQA D+ IH K+I+RV + L +Y KH + E +Q ++RDYF
Sbjct: 173 IHQPSGGASGQASDIAIHAKEILRVREVLTGIYQKHCAREGESVQDGLNRFQTALERDYF 232
Query: 206 MTPEEAKEFGIIDEVIDQR 224
MT +EA EFGI+D V+++R
Sbjct: 233 MTAQEALEFGIVDRVLEKR 251
>gi|398867303|ref|ZP_10622767.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
sp. GM78]
gi|398237281|gb|EJN23035.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
sp. GM78]
Length = 211
Score = 260 bits (665), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 113/192 (58%), Positives = 156/192 (81%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
L+PMV+E S+RGERAYDI+SRLLKER+I + GP+ D A+++ AQLLFLE+ENP K IH+
Sbjct: 19 LVPMVVEQSARGERAYDIYSRLLKERVIFLVGPVEDYMANLICAQLLFLEAENPDKDIHL 78
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VTAG++IYDTMQ+I+ ++T C+GQA SMG+ LL +G KG+R LPNS +MI
Sbjct: 79 YINSPGGSVTAGMSIYDTMQFIKPNVSTTCIGQACSMGAFLLTAGAKGKRYCLPNSRVMI 138
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQP GG+ GQA D+ IH K+I+ + + LN L KH+G+++E I+++ +RD FM+ E A+E
Sbjct: 139 HQPLGGFQGQASDIEIHAKEILFIRERLNTLMAKHSGRTLEEIERDTNRDNFMSAEAARE 198
Query: 214 FGIIDEVIDQRP 225
+G+IDEVI+QRP
Sbjct: 199 YGLIDEVINQRP 210
>gi|443730787|gb|ELU16145.1| hypothetical protein CAPTEDRAFT_163852 [Capitella teleta]
Length = 233
Score = 260 bits (665), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 119/192 (61%), Positives = 152/192 (79%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
++P+V+E + RGER+YDI+SRLLKERIIC+ GPIND + +VVAQLLFL+SE+ KPIHM
Sbjct: 35 MVPIVVEQTGRGERSYDIYSRLLKERIICLMGPINDHVSSLVVAQLLFLQSESSKKPIHM 94
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VTAGL IYDTMQY+ PI T C+GQA+SM SLLL +G G R +LPNS IMI
Sbjct: 95 YINSPGGVVTAGLGIYDTMQYVLPPIATWCVGQASSMASLLLCAGAPGMRHSLPNSRIMI 154
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQP GG GQA D+ I K+I+ + +N LY KH+ QS+E I+KNM+RD+F++ EEAKE
Sbjct: 155 HQPHGGAQGQATDIQIQAKEILTLKTKINNLYVKHSLQSLETIEKNMERDHFLSAEEAKE 214
Query: 214 FGIIDEVIDQRP 225
FG+ID+V+ P
Sbjct: 215 FGLIDQVLVHPP 226
>gi|410727500|ref|ZP_11365717.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
sp. Maddingley MBC34-26]
gi|410598746|gb|EKQ53313.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
sp. Maddingley MBC34-26]
Length = 199
Score = 260 bits (665), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 115/188 (61%), Positives = 157/188 (83%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
LIPMV+E +SRGER+YDIFSRLLKERII ++G +NDD+A+++VAQL+FLESE+P K I++
Sbjct: 3 LIPMVVEQTSRGERSYDIFSRLLKERIIMLSGEVNDDSANLIVAQLIFLESEDPDKDIYL 62
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG +TAG AIYDTMQYI+ ++TIC+G AASMG+ LL+SG KG+R ALPN+ +MI
Sbjct: 63 YINSPGGSITAGNAIYDTMQYIKCDVSTICIGMAASMGAFLLSSGAKGKRFALPNAEVMI 122
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQP GG+ GQA D IH K+I+++ D LN + ++TG+ +E I+ +++RD FMT EEAK
Sbjct: 123 HQPLGGFQGQATDFEIHAKRILKMKDTLNRILSENTGKPLETIKADVERDNFMTAEEAKA 182
Query: 214 FGIIDEVI 221
+G+ID+VI
Sbjct: 183 YGLIDDVI 190
>gi|134300401|ref|YP_001113897.1| ATP-dependent Clp protease proteolytic subunit [Desulfotomaculum
reducens MI-1]
gi|172044337|sp|A4J7L9.1|CLPP_DESRM RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|134053101|gb|ABO51072.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Desulfotomaculum reducens MI-1]
Length = 195
Score = 260 bits (665), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 120/191 (62%), Positives = 154/191 (80%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
L+P+V+E ++RGERAYDI+SRLLK+RII I GPI+D A++V+AQ LFLE+E+P K IH+
Sbjct: 4 LVPIVVEQTNRGERAYDIYSRLLKDRIIFIGGPIDDHIANLVIAQFLFLEAEDPEKDIHL 63
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VTAGLAIYDTMQYI+ ++TICLGQAASMGS LLA+G G+R ALP + IMI
Sbjct: 64 YINSPGGVVTAGLAIYDTMQYIKPAVSTICLGQAASMGSFLLAAGAPGKRYALPMARIMI 123
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQP GG GQA D+ IH K+I+R+ D LN HTGQ +E I ++ +RDYFM+ EEAK+
Sbjct: 124 HQPLGGVQGQATDIDIHAKEILRMKDLLNDRLAHHTGQPLEQITRDTERDYFMSAEEAKK 183
Query: 214 FGIIDEVIDQR 224
+G+IDEV+ R
Sbjct: 184 YGLIDEVMPYR 194
>gi|165933331|ref|YP_001650120.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia
rickettsii str. Iowa]
gi|165908418|gb|ABY72714.1| ATP-dependent endopeptidase clp proteolytic subunit [Rickettsia
rickettsii str. Iowa]
Length = 216
Score = 260 bits (665), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 122/199 (61%), Positives = 157/199 (78%), Gaps = 1/199 (0%)
Query: 32 FSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPI 91
S +P+VIE +SRGERAYDI+SRLLKERII + + D A+++VAQLLFLE+ENP K I
Sbjct: 16 MSYVPIVIEPTSRGERAYDIYSRLLKERIIFVCSTVEDHMANLIVAQLLFLEAENPKKDI 75
Query: 92 HMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTI 151
+MY+NSPGG VTAGLAIYDTMQYI+ + T+C+GQA SMGSLLL G KG R +LP+S I
Sbjct: 76 YMYINSPGGVVTAGLAIYDTMQYIKPKVATLCIGQACSMGSLLLCGGEKGMRYSLPHSRI 135
Query: 152 MIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEA 211
MIHQPSGGY GQA D+ IH ++ +++ LN LY KHT Q ++ I+K+M+RD FM+PEEA
Sbjct: 136 MIHQPSGGYKGQATDIEIHAQETLKIKRLLNELYSKHTEQELQHIEKSMERDNFMSPEEA 195
Query: 212 KEFGIIDEVIDQRP-MALV 229
K+FG++D +I R MAL+
Sbjct: 196 KKFGLVDNIISSRDVMALL 214
>gi|406990091|gb|EKE09780.1| hypothetical protein ACD_16C00110G0015 [uncultured bacterium]
Length = 208
Score = 260 bits (665), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 120/194 (61%), Positives = 154/194 (79%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+P+V+E ++RGER++DIFSRLLKERII ING I+D + +V AQLLFLESENP+K I
Sbjct: 7 NLVPVVVEQTARGERSFDIFSRLLKERIIFINGQIDDVVSSLVCAQLLFLESENPNKDIS 66
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
+Y+NSPGG VT+GLAIYDTM YIR I T+C GQAASMGS LLA+GTKG+R LPN+ +M
Sbjct: 67 IYINSPGGVVTSGLAIYDTMNYIRPDIATLCFGQAASMGSFLLAAGTKGKRYCLPNARVM 126
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQP GG+ GQA D+ IH ++I+ + LN +Y TGQ +E+I+K MDRD FM E AK
Sbjct: 127 IHQPWGGFQGQASDVEIHAREILEIRTRLNKIYADCTGQPLEIIEKAMDRDNFMPAEAAK 186
Query: 213 EFGIIDEVIDQRPM 226
+FG++DEVI RP+
Sbjct: 187 KFGLVDEVIITRPV 200
>gi|379018956|ref|YP_005295190.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia
rickettsii str. Hlp#2]
gi|379712470|ref|YP_005300809.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia philipii
str. 364D]
gi|376329115|gb|AFB26352.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia philipii
str. 364D]
gi|376331536|gb|AFB28770.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia
rickettsii str. Hlp#2]
Length = 201
Score = 260 bits (665), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 122/199 (61%), Positives = 157/199 (78%), Gaps = 1/199 (0%)
Query: 32 FSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPI 91
S +P+VIE +SRGERAYDI+SRLLKERII + + D A+++VAQLLFLE+ENP K I
Sbjct: 1 MSYVPIVIEPTSRGERAYDIYSRLLKERIIFVCSTVEDHMANLIVAQLLFLEAENPKKDI 60
Query: 92 HMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTI 151
+MY+NSPGG VTAGLAIYDTMQYI+ + T+C+GQA SMGSLLL G KG R +LP+S I
Sbjct: 61 YMYINSPGGVVTAGLAIYDTMQYIKPKVATLCIGQACSMGSLLLCGGEKGMRYSLPHSRI 120
Query: 152 MIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEA 211
MIHQPSGGY GQA D+ IH ++ +++ LN LY KHT Q ++ I+K+M+RD FM+PEEA
Sbjct: 121 MIHQPSGGYKGQATDIEIHAQETLKIKRLLNELYSKHTEQELQHIEKSMERDNFMSPEEA 180
Query: 212 KEFGIIDEVIDQR-PMALV 229
K+FG++D +I R MAL+
Sbjct: 181 KKFGLVDNIISSRDAMALL 199
>gi|13476994|ref|NP_108564.1| ATP-dependent Clp protease proteolytic subunit [Mesorhizobium loti
MAFF303099]
gi|18202642|sp|Q982V6.1|CLPP2_RHILO RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|14027757|dbj|BAB54350.1| ATP-dependent Clp proteinase [Mesorhizobium loti MAFF303099]
Length = 209
Score = 260 bits (665), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 118/192 (61%), Positives = 154/192 (80%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E ++RGERAYDIFSRLLKERII I GP+ D A +V AQLLFLE+ENP K I+
Sbjct: 10 NLVPMVVEQTNRGERAYDIFSRLLKERIIFITGPVEDGMATLVCAQLLFLEAENPKKEIN 69
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
+Y+NSPGG VT+G+AIYDTMQ+I+ ++T+C+GQAASMGSLLL +G K R A PN+ IM
Sbjct: 70 LYINSPGGVVTSGMAIYDTMQFIKPAVSTLCIGQAASMGSLLLTAGHKDMRFATPNARIM 129
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
+HQPSGG+ GQA D+ H IV++ LN +Y KHTG+S E I++ +DRD+FMT +EAK
Sbjct: 130 VHQPSGGFQGQASDIERHAMDIVKLKRRLNEVYVKHTGKSYEEIERTLDRDHFMTADEAK 189
Query: 213 EFGIIDEVIDQR 224
+FG+ID+VI R
Sbjct: 190 DFGLIDKVISSR 201
>gi|381169038|ref|ZP_09878213.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Phaeospirillum molischianum DSM 120]
gi|380681827|emb|CCG43035.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Phaeospirillum molischianum DSM 120]
Length = 214
Score = 260 bits (665), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 115/194 (59%), Positives = 158/194 (81%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E ++RGER+YDI+SRLLKERI+ + G ++D+ A ++ AQ LFLESENP+K I
Sbjct: 13 TLVPMVVEQTNRGERSYDIYSRLLKERIVFLTGQVHDEVACLICAQFLFLESENPTKDIA 72
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
Y+NSPGG VT+GLAIYDTMQYIR ++T+C+GQAASMGSLLL +G KG+R +LPNS IM
Sbjct: 73 FYINSPGGVVTSGLAIYDTMQYIRPAVSTVCIGQAASMGSLLLTAGAKGKRLSLPNSRIM 132
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
+HQPSGG GQA D+ I ++I+ + LN +Y HTGQ +EVI++ M+RD FMT +EA+
Sbjct: 133 VHQPSGGAQGQATDIEIQAREILALRARLNNIYVDHTGQPLEVIERVMERDKFMTADEAR 192
Query: 213 EFGIIDEVIDQRPM 226
EFG+ID+V+++R +
Sbjct: 193 EFGLIDDVVNKRSL 206
>gi|409426236|ref|ZP_11260798.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas sp.
HYS]
Length = 213
Score = 260 bits (665), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 115/194 (59%), Positives = 153/194 (78%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
L+PMVIE S+RGERAYDI+SRLLKER+I + GP+ D A++V AQ+LFLE+ENP K IH+
Sbjct: 19 LVPMVIEQSARGERAYDIYSRLLKERVIFLVGPVEDYMANLVAAQMLFLEAENPDKDIHL 78
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VTAG++IYDTMQ+I+ ++TIC+GQA SMG+ LLA+G KG+R LPNS +MI
Sbjct: 79 YINSPGGSVTAGMSIYDTMQFIKPDVSTICIGQACSMGAFLLAAGAKGKRHCLPNSRVMI 138
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQP GG+ GQA D+ IH K+I+ + LN L HTGQ +E I+++ +RD FM+ E A E
Sbjct: 139 HQPLGGFQGQATDIEIHAKEILSIKSRLNELLAYHTGQDLETIKRDTERDNFMSAERAAE 198
Query: 214 FGIIDEVIDQRPMA 227
+G+ID V D+R +A
Sbjct: 199 YGLIDSVYDKRQLA 212
>gi|90419399|ref|ZP_01227309.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Aurantimonas
manganoxydans SI85-9A1]
gi|90336336|gb|EAS50077.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Aurantimonas
manganoxydans SI85-9A1]
Length = 210
Score = 260 bits (665), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 119/207 (57%), Positives = 159/207 (76%), Gaps = 6/207 (2%)
Query: 31 SFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKP 90
+ +L+PMV+E ++RGERAYDIFSRLLKER+I I GPI D A +V AQLLFLE+ENP K
Sbjct: 8 AMNLVPMVVEQTNRGERAYDIFSRLLKERVIFITGPIEDSMATLVCAQLLFLEAENPKKE 67
Query: 91 IHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNST 150
I +Y+NSPGG VT+G+AIYDTMQ+I+ ++T+C+GQAASMGSLLL +G K R A PN+
Sbjct: 68 IALYINSPGGVVTSGMAIYDTMQFIKPAVSTLCIGQAASMGSLLLCAGHKDMRFATPNAR 127
Query: 151 IMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEE 210
IM+HQPSGG+SGQA D+ H + I+++ LN +Y +HTGQ E +++ +DRD+FMT +E
Sbjct: 128 IMVHQPSGGFSGQASDIERHAQDIIKLKRRLNEVYVEHTGQDYETVERTLDRDHFMTAQE 187
Query: 211 AKEFGIIDEVIDQRPMALVTDAVGREG 237
A+EFG+ID+V R DA+ EG
Sbjct: 188 AREFGLIDKVYSSR------DALEAEG 208
>gi|90423893|ref|YP_532263.1| endopeptidase Clp [Rhodopseudomonas palustris BisB18]
gi|116243159|sp|Q215J2.1|CLPP_RHOPB RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|90105907|gb|ABD87944.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Rhodopseudomonas palustris BisB18]
Length = 210
Score = 260 bits (665), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 116/192 (60%), Positives = 155/192 (80%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E ++RGERAYDIFSRLLKERII + GP+ D + + VAQLLFLE+ENP K I
Sbjct: 10 NLVPMVVEQTNRGERAYDIFSRLLKERIIFVTGPVEDGMSTLTVAQLLFLEAENPKKEIS 69
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
MY+NSPGG VT+GLAIYDTMQ+IR P++T+C GQAASMGSLLLA+G R +LPNS IM
Sbjct: 70 MYINSPGGVVTSGLAIYDTMQFIRPPVSTLCTGQAASMGSLLLAAGHPDMRFSLPNSRIM 129
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
+HQPSGG+ GQA D+ +H ++I+ + LN +Y KHTGQ+ + I+ ++RD F+T + A+
Sbjct: 130 VHQPSGGFQGQATDIMLHAQEILNLKKRLNEIYVKHTGQTYKAIEDALERDKFLTADMAR 189
Query: 213 EFGIIDEVIDQR 224
+FGI+D+VID+R
Sbjct: 190 DFGIVDKVIDKR 201
>gi|423096202|ref|ZP_17083998.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
fluorescens Q2-87]
gi|397886616|gb|EJL03099.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
fluorescens Q2-87]
Length = 213
Score = 260 bits (665), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 116/193 (60%), Positives = 153/193 (79%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
L+PMVIE S+RGERAYDI+SRLLKER+I + GP+ D A++V AQLLFLE+ENP K IH+
Sbjct: 19 LVPMVIEQSARGERAYDIYSRLLKERVIFLIGPVEDYMANLVAAQLLFLEAENPDKDIHL 78
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VTAG++IYDTMQ+I+ ++TIC+GQA SMG+ LLA G G+R LPNS +MI
Sbjct: 79 YINSPGGSVTAGMSIYDTMQFIKPDVSTICIGQACSMGAFLLAGGAAGKRHCLPNSRMMI 138
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQP GG+ GQA D+ IH K+I+ + LN+L HTGQS+E I+++ +RD FM+ E A E
Sbjct: 139 HQPLGGFQGQASDIDIHAKEILHIRSRLNSLLAHHTGQSLETIERDTERDNFMSAERAAE 198
Query: 214 FGIIDEVIDQRPM 226
+G+ID VI++R M
Sbjct: 199 YGLIDSVINKRQM 211
>gi|357025389|ref|ZP_09087513.1| ATP-dependent Clp protease proteolytic subunit [Mesorhizobium
amorphae CCNWGS0123]
gi|355542633|gb|EHH11785.1| ATP-dependent Clp protease proteolytic subunit [Mesorhizobium
amorphae CCNWGS0123]
Length = 209
Score = 260 bits (665), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 117/192 (60%), Positives = 155/192 (80%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E ++RGERAYDIFSRLLKERII I GP+ D A +V AQLLFLE+ENP K I+
Sbjct: 10 NLVPMVVEQTNRGERAYDIFSRLLKERIIFITGPVEDGMATLVCAQLLFLEAENPKKEIN 69
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
+Y+NSPGG VT+G+AIYDTMQ+I+ ++T+C+GQAASMGSLLL +G K R A PN+ IM
Sbjct: 70 LYINSPGGVVTSGMAIYDTMQFIKPAVSTLCIGQAASMGSLLLCAGQKDMRFATPNARIM 129
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
+HQPSGG+ GQA D+ H + I+++ LN +Y KHTG+S + I+K +DRD+FMT +EAK
Sbjct: 130 VHQPSGGFQGQASDIERHAQDIIKLKRRLNEVYVKHTGKSYDEIEKTLDRDHFMTADEAK 189
Query: 213 EFGIIDEVIDQR 224
+FG+ID+VI R
Sbjct: 190 DFGLIDKVISSR 201
>gi|322418659|ref|YP_004197882.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Geobacter sp.
M18]
gi|320125046|gb|ADW12606.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Geobacter sp.
M18]
Length = 199
Score = 260 bits (664), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 114/188 (60%), Positives = 155/188 (82%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
L+P+V+E + RGER+YDI+SRLLK+RII + G I+D+ A++V+AQLLFLE+E+P K IH+
Sbjct: 2 LVPIVVEQTGRGERSYDIYSRLLKDRIIFLGGGIDDNVANLVIAQLLFLEAEDPDKDIHL 61
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VTAG+AIYDTM+YI++P++TIC+GQAASMG+ LL+ G KG+R +L NS IMI
Sbjct: 62 YINSPGGVVTAGMAIYDTMRYIKAPVSTICIGQAASMGAFLLSGGEKGKRFSLANSRIMI 121
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQP GG+ GQA D+ IH K+I+R+ D LN L +HTGQS E + + +RDYFM+ EEAK
Sbjct: 122 HQPLGGFQGQATDIHIHAKEILRMKDQLNELLAEHTGQSFEKVAADTERDYFMSGEEAKS 181
Query: 214 FGIIDEVI 221
+GIID ++
Sbjct: 182 YGIIDAIV 189
>gi|407789641|ref|ZP_11136741.1| ATP-dependent Clp protease proteolytic subunit [Gallaecimonas
xiamenensis 3-C-1]
gi|407206301|gb|EKE76259.1| ATP-dependent Clp protease proteolytic subunit [Gallaecimonas
xiamenensis 3-C-1]
Length = 203
Score = 260 bits (664), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 112/192 (58%), Positives = 154/192 (80%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMVIE ++RGER++DI+SRLLKER+I + G + D A+++VAQLLFLE+ENP K IH
Sbjct: 12 ALVPMVIEQTARGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQLLFLEAENPEKDIH 71
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
+Y+NSPGG VTAG+AIYDTMQ+I++ ++T+C+GQAASMG+ LLA G KG+R LPN+ +M
Sbjct: 72 LYINSPGGSVTAGMAIYDTMQFIKADVSTLCIGQAASMGAFLLAGGAKGKRHCLPNARVM 131
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQP GG+ GQA D+ IH ++I+ + D LN L HTGQS+E I ++ DRD FMT E+A
Sbjct: 132 IHQPLGGFQGQASDIEIHAREILFIKDRLNRLLADHTGQSLETIAQDTDRDRFMTAEQAM 191
Query: 213 EFGIIDEVIDQR 224
E+G++D V+ R
Sbjct: 192 EYGLVDSVLANR 203
>gi|389690968|ref|ZP_10179861.1| protease subunit of ATP-dependent protease [Microvirga sp. WSM3557]
gi|388589211|gb|EIM29500.1| protease subunit of ATP-dependent protease [Microvirga sp. WSM3557]
Length = 210
Score = 260 bits (664), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 117/200 (58%), Positives = 158/200 (79%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E S+RGERA+DI+SRLL+ERII + GP+ D +A ++VAQLLFLE+ENP K I
Sbjct: 11 TLVPMVVEQSNRGERAFDIYSRLLRERIIFLTGPVEDYSASLIVAQLLFLEAENPKKEIS 70
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
Y+NSPGG VT+GL+IYDTMQ+IR P++T+C+GQAASMGSLLL +G KG R ALPN+ IM
Sbjct: 71 FYINSPGGVVTSGLSIYDTMQFIRCPVSTLCVGQAASMGSLLLTAGEKGMRFALPNARIM 130
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
+HQPSGGY GQ D+ IH ++ + LN +Y HTG++ E I++ ++RD FMT + A+
Sbjct: 131 VHQPSGGYQGQVTDIMIHARESEALKRRLNEIYVGHTGRNYEEIERALERDNFMTAQAAQ 190
Query: 213 EFGIIDEVIDQRPMALVTDA 232
EFG+ID+VI++RP T A
Sbjct: 191 EFGLIDQVIEKRPEPAATPA 210
>gi|18203597|sp|Q9X5N0.1|CLPP2_MYXXA RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|4838463|gb|AAD31002.1|AF127082_1 ATP-dependent protease proteolytic subunit ClpP [Myxococcus xanthus
DZF1]
Length = 206
Score = 260 bits (664), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 125/208 (60%), Positives = 161/208 (77%), Gaps = 4/208 (1%)
Query: 32 FSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPI 91
F +P VIE + RGER+YDI SRLLK+RI+ + I+DD A+V+VAQLLFLESE+P K I
Sbjct: 3 FMPVPYVIEQTHRGERSYDIISRLLKDRIVMLGTEIDDDVANVIVAQLLFLESEDPDKDI 62
Query: 92 HMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTI 151
++Y+NSPGG VTAGLAIYDTMQY++ P++TIC+GQAASMG++LL +G KG+R ALP+S I
Sbjct: 63 NLYINSPGGSVTAGLAIYDTMQYVKCPVSTICVGQAASMGAVLLLAGAKGKRYALPSSRI 122
Query: 152 MIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEA 211
MIHQP GG GQA D+ I K+I+R+ LN L KHTGQSIE ++K+ DRDYFM EA
Sbjct: 123 MIHQPLGGVRGQATDIEIQAKEILRMKAKLNELIVKHTGQSIERVEKDTDRDYFMGASEA 182
Query: 212 KEFGIIDEVIDQRPMALVTDAVGREGKE 239
K +GIIDE+ Q P +V +G+E K+
Sbjct: 183 KAYGIIDEI--QNPRKVV--GLGKEEKK 206
>gi|114707244|ref|ZP_01440142.1| ATP-dependent Clp protease proteolytic subunit [Fulvimarina pelagi
HTCC2506]
gi|114537440|gb|EAU40566.1| ATP-dependent Clp protease proteolytic subunit [Fulvimarina pelagi
HTCC2506]
Length = 217
Score = 260 bits (664), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 120/207 (57%), Positives = 154/207 (74%)
Query: 31 SFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKP 90
+ +L+PMV+E ++RGERAYDIFSRLLKER+I I GPI D A +V AQLLFLE+ENP K
Sbjct: 8 AMNLVPMVVEQTNRGERAYDIFSRLLKERVIFITGPIEDSMATLVCAQLLFLEAENPKKE 67
Query: 91 IHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNST 150
I +Y+NSPGG VT+G+AIYDTMQ+IR + T+C+GQAASMGSLLL +G K R A PN+
Sbjct: 68 IALYINSPGGVVTSGMAIYDTMQFIRPAVTTLCIGQAASMGSLLLCAGEKDMRFATPNAR 127
Query: 151 IMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEE 210
IM+HQPSGG+ GQA D+ H + I+++ LN Y KHTGQ E I++ +DRD+FMT EE
Sbjct: 128 IMVHQPSGGFQGQASDIERHAQDIIKLKRRLNETYVKHTGQDYETIERTLDRDHFMTAEE 187
Query: 211 AKEFGIIDEVIDQRPMALVTDAVGREG 237
+ EFG+ID+V R TD + G
Sbjct: 188 SLEFGLIDKVYSSRVEQEGTDRTSQHG 214
>gi|380510628|ref|ZP_09854035.1| ATP-dependent Clp protease proteolytic subunit [Xanthomonas
sacchari NCPPB 4393]
Length = 208
Score = 260 bits (664), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 115/196 (58%), Positives = 160/196 (81%)
Query: 30 RSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSK 89
++ +L+PMV+E +SRGERAYDI+SRLLKER+I + GPI+D A+V+VAQLLFLE++NP K
Sbjct: 6 KALNLVPMVVEQTSRGERAYDIYSRLLKERLIFLVGPIDDHMANVIVAQLLFLEADNPEK 65
Query: 90 PIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNS 149
I +Y+NSPGG VTAG+AIYDTMQYI+ ++TIC+GQAASMG+LLLASG G+R ALPNS
Sbjct: 66 DISIYINSPGGVVTAGMAIYDTMQYIKPDVSTICVGQAASMGALLLASGAAGKRYALPNS 125
Query: 150 TIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPE 209
+MIHQP GG+ GQA D+ IH ++I+ + LN + KHTGQS+E I ++ +RD F +
Sbjct: 126 RVMIHQPLGGFQGQATDIDIHAREILTLRARLNEILAKHTGQSLETIARDTERDNFKSAI 185
Query: 210 EAKEFGIIDEVIDQRP 225
+A+ +G++D+V+++RP
Sbjct: 186 DAQAYGLVDQVLERRP 201
>gi|241116836|ref|XP_002401631.1| ATP-dependent Clp protease, proteolytic subunit, putative [Ixodes
scapularis]
gi|215493175|gb|EEC02816.1| ATP-dependent Clp protease, proteolytic subunit, putative [Ixodes
scapularis]
Length = 205
Score = 260 bits (664), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 119/193 (61%), Positives = 152/193 (78%)
Query: 32 FSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPI 91
S +P+VIE +SRGERAYDI+SRLLKERII + + D +++VAQLLFLE+ENP K I
Sbjct: 5 MSYVPIVIEQTSRGERAYDIYSRLLKERIIFVCSTVEDHMTNLIVAQLLFLEAENPKKDI 64
Query: 92 HMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTI 151
+MY+NSPGG +TAGLAIYDTMQYI+ + T+C+GQA SMGSLLL G KG R +LP+S I
Sbjct: 65 YMYINSPGGVITAGLAIYDTMQYIKPKVATLCIGQACSMGSLLLCGGEKGMRYSLPHSRI 124
Query: 152 MIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEA 211
MIHQPSGGY GQA D+ IH ++ +++ LN LY KHT Q ++ I+K+M+RD FM+PEEA
Sbjct: 125 MIHQPSGGYKGQATDIEIHAQETLKIKRLLNELYSKHTRQELKHIEKSMERDNFMSPEEA 184
Query: 212 KEFGIIDEVIDQR 224
K+FGIID +I R
Sbjct: 185 KKFGIIDNIISSR 197
>gi|170744618|ref|YP_001773273.1| ATP-dependent Clp protease proteolytic subunit [Methylobacterium
sp. 4-46]
gi|168198892|gb|ACA20839.1| Endopeptidase Clp [Methylobacterium sp. 4-46]
Length = 208
Score = 260 bits (664), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 116/192 (60%), Positives = 155/192 (80%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E SSRGERA+DI+SRLL+ERII + GP+ D +A ++VAQLLFLE+ENP K I
Sbjct: 11 ALVPMVVEQSSRGERAFDIYSRLLRERIIFLTGPVEDYSASLIVAQLLFLEAENPKKEIS 70
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
Y+NSPGG VT+GL+IYDTMQ+IR P+ T+C+GQAASMGSLLLA+G G R ALPN+ IM
Sbjct: 71 FYINSPGGVVTSGLSIYDTMQFIRCPVATLCVGQAASMGSLLLAAGEPGHRFALPNARIM 130
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
+HQPSGG+ GQA D+ IH ++I + LN +Y KHTG+ + I++ ++RD FMT + AK
Sbjct: 131 VHQPSGGFQGQATDILIHAREIEALKRRLNEIYVKHTGRDYDAIEQGLERDNFMTADAAK 190
Query: 213 EFGIIDEVIDQR 224
E+G+IDEV+ +R
Sbjct: 191 EWGLIDEVLQKR 202
>gi|449550407|gb|EMD41371.1| hypothetical protein CERSUDRAFT_109969 [Ceriporiopsis subvermispora
B]
Length = 247
Score = 260 bits (664), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 121/203 (59%), Positives = 158/203 (77%), Gaps = 7/203 (3%)
Query: 30 RSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSK 89
R L+P+VIE + RGER+YDIFSRLL+ER+I + GPI D+ + + VAQLLFLE+E SK
Sbjct: 40 RMSGLVPIVIEQTGRGERSYDIFSRLLRERVIMLYGPIGDNDSALTVAQLLFLEAEEASK 99
Query: 90 PIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNS 149
PIH+Y+NSPGG VTAGLAIYDT+QY+ SPI+T C+GQA SMGSLLLA+G KG+R ALP+S
Sbjct: 100 PIHLYVNSPGGSVTAGLAIYDTVQYVSSPIHTYCVGQACSMGSLLLAAGEKGKRHALPHS 159
Query: 150 TIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKN-------MDR 202
+IMIHQPSGG SGQA D+ IH K+I+RV + L +Y +H G+ E + ++R
Sbjct: 160 SIMIHQPSGGASGQASDIAIHAKEILRVREVLTGIYQRHCGKDGEPVPDGLSRFATALER 219
Query: 203 DYFMTPEEAKEFGIIDEVIDQRP 225
DYFMT +EA +FGI+D V+++RP
Sbjct: 220 DYFMTAQEALDFGIVDSVLERRP 242
>gi|163781838|ref|ZP_02176838.1| ATP-dependent Clp protease proteolytic subunit [Hydrogenivirga sp.
128-5-R1-1]
gi|159883058|gb|EDP76562.1| ATP-dependent Clp protease proteolytic subunit [Hydrogenivirga sp.
128-5-R1-1]
Length = 201
Score = 260 bits (664), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 115/191 (60%), Positives = 159/191 (83%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
L+P+VIE + RGERAYDI+SRLL++RI+ + PI+D A+++VAQLLFLES++P K I++
Sbjct: 10 LVPIVIEQTPRGERAYDIYSRLLQDRIVLLGFPIDDHVANLIVAQLLFLESQDPDKDIYL 69
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VTAG+A+YDTMQYI+ + TIC+GQAASMG++LLA+G KG+R ALP+S IMI
Sbjct: 70 YINSPGGSVTAGMAVYDTMQYIKPDVVTICIGQAASMGAVLLAAGAKGKRYALPHSRIMI 129
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQP GG GQA D+ IH ++I R+ LN + KHTGQ +E I+K+++RDYFM+ EEAK+
Sbjct: 130 HQPLGGIQGQATDIIIHAEEIKRIKRMLNEILAKHTGQDLEKIEKDVERDYFMSAEEAKD 189
Query: 214 FGIIDEVIDQR 224
+G+ID+VI++R
Sbjct: 190 YGVIDKVIEKR 200
>gi|424865494|ref|ZP_18289359.1| ATP-dependent Clp protease, proteolytic subunit ClpP [SAR86 cluster
bacterium SAR86B]
gi|400758762|gb|EJP72964.1| ATP-dependent Clp protease, proteolytic subunit ClpP [SAR86 cluster
bacterium SAR86B]
Length = 204
Score = 260 bits (664), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 115/194 (59%), Positives = 158/194 (81%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+LIPMVIE + RGER++DI+SRLLKER+I + GPI+D +++VVAQLLFLESENP K I
Sbjct: 7 ALIPMVIEQTPRGERSFDIYSRLLKERVIFLTGPIDDHISNLVVAQLLFLESENPEKDIS 66
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
+Y+NSPGG ++AGLAIYDTMQ+I S ++T+C+GQAASMG+LLLA G KG+R ALPNS +M
Sbjct: 67 IYINSPGGSISAGLAIYDTMQFISSSVSTMCIGQAASMGALLLAGGDKGKRFALPNSRVM 126
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQP GG+ GQA D IH K+I+ + +N + KHTGQ+++ I+K+ DRD F+ EEA
Sbjct: 127 IHQPLGGFQGQASDFEIHAKEILYMKKIVNEILAKHTGQTVKKIEKDTDRDNFLNAEEAV 186
Query: 213 EFGIIDEVIDQRPM 226
++G++D++ID+R +
Sbjct: 187 KYGLVDKIIDKRDI 200
>gi|150388889|ref|YP_001318938.1| ATP-dependent Clp protease proteolytic subunit [Alkaliphilus
metalliredigens QYMF]
gi|167008644|sp|A6TM61.1|CLPP_ALKMQ RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|149948751|gb|ABR47279.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Alkaliphilus
metalliredigens QYMF]
Length = 194
Score = 260 bits (664), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 117/192 (60%), Positives = 155/192 (80%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+P+V+E +SRGER+YDIFSRLLKERII + IND TA ++VAQLLFLE+E+P K I
Sbjct: 2 ALVPVVVEQTSRGERSYDIFSRLLKERIIFLGDEINDVTASLLVAQLLFLEAEDPDKDIQ 61
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
+Y+NSPGG +TAG+AIYDTM YI+ ++TIC+G AASMG+ LLA+G KG+R ALPN+ +M
Sbjct: 62 IYINSPGGSITAGMAIYDTMNYIKPDVSTICVGMAASMGAFLLAAGAKGKRFALPNAEVM 121
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQP GG GQA+D+ IH ++IV++ D LN + + TGQ +E +QK+ DRD+FM +EAK
Sbjct: 122 IHQPLGGTRGQAEDIRIHAERIVKLRDTLNKILVERTGQPLERVQKDTDRDFFMEAKEAK 181
Query: 213 EFGIIDEVIDQR 224
E+GIIDEVI R
Sbjct: 182 EYGIIDEVISSR 193
>gi|103488219|ref|YP_617780.1| ATP-dependent Clp protease proteolytic subunit [Sphingopyxis
alaskensis RB2256]
gi|116243167|sp|Q1GPH5.1|CLPP_SPHAL RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|98978296|gb|ABF54447.1| ATP-dependent Clp protease proteolytic subunit ClpP [Sphingopyxis
alaskensis RB2256]
Length = 216
Score = 260 bits (664), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 121/208 (58%), Positives = 161/208 (77%), Gaps = 1/208 (0%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+P+V+E +SRGER++DIFSRLL+ERI+ + G + D+ A ++VAQLLFLESENP K I+
Sbjct: 7 ALVPVVVEQTSRGERSFDIFSRLLRERIVFVTGEVEDNMASLIVAQLLFLESENPKKDIY 66
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
MY+NSPGG VTAG+AI+DTMQYIR + T+C+GQAASMGS LLA+G G R AL N+ +M
Sbjct: 67 MYINSPGGVVTAGMAIHDTMQYIRPRVGTVCIGQAASMGSFLLAAGEPGMRVALTNARVM 126
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
+HQPSGG G A D+ I K+I+R+ +N LY K+TG+S++ I+K MDRD F+ +EAK
Sbjct: 127 VHQPSGGARGMASDIEIQAKEILRIRKRMNDLYVKYTGKSLKDIEKAMDRDTFLEADEAK 186
Query: 213 EFGIIDEVIDQRPMALVTDAVGREGKEG 240
EFGI+D V D+RP AL D R+ EG
Sbjct: 187 EFGIVDHVYDRRP-ALPGDDAPRDVSEG 213
>gi|334129245|ref|ZP_08503050.1| ATP-dependent Clp protease proteolytic subunit [Methyloversatilis
universalis FAM5]
gi|333445471|gb|EGK73412.1| ATP-dependent Clp protease proteolytic subunit [Methyloversatilis
universalis FAM5]
Length = 206
Score = 260 bits (664), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 113/193 (58%), Positives = 154/193 (79%)
Query: 32 FSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPI 91
++PMVIE S RGERAYDI+SRLL+ER++ + GP+ND TA+++VAQLLFLESENP K I
Sbjct: 8 LGMVPMVIEQSGRGERAYDIYSRLLRERVVFLVGPVNDATANLIVAQLLFLESENPDKDI 67
Query: 92 HMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTI 151
Y+NSPGG VTAGL+IYDTMQ+I+ ++T+C+GQAASMG+ LL++G KG+R LPNS +
Sbjct: 68 FFYINSPGGSVTAGLSIYDTMQFIKPDVSTLCIGQAASMGAFLLSAGAKGKRACLPNSRV 127
Query: 152 MIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEA 211
MIHQP GG+ GQA D+ IH ++I+ + LN + HTGQ IE I+++ DRD F++ E+A
Sbjct: 128 MIHQPMGGFQGQASDIEIHAREILTLRAKLNTIMSHHTGQPIETIERDTDRDNFLSAEQA 187
Query: 212 KEFGIIDEVIDQR 224
+E+GIID+V+ R
Sbjct: 188 REYGIIDKVLTTR 200
>gi|157828616|ref|YP_001494858.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia
rickettsii str. 'Sheila Smith']
gi|378721430|ref|YP_005286317.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia
rickettsii str. Colombia]
gi|378722779|ref|YP_005287665.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia
rickettsii str. Arizona]
gi|378724135|ref|YP_005289019.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia
rickettsii str. Hauke]
gi|379016310|ref|YP_005292545.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia
rickettsii str. Brazil]
gi|379017921|ref|YP_005294156.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia
rickettsii str. Hino]
gi|166214706|sp|A8GSH5.1|CLPP_RICRS RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|157801097|gb|ABV76350.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia
rickettsii str. 'Sheila Smith']
gi|376324834|gb|AFB22074.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia
rickettsii str. Brazil]
gi|376326454|gb|AFB23693.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia
rickettsii str. Colombia]
gi|376327803|gb|AFB25041.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia
rickettsii str. Arizona]
gi|376330487|gb|AFB27723.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia
rickettsii str. Hino]
gi|376333150|gb|AFB30383.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia
rickettsii str. Hauke]
Length = 201
Score = 260 bits (664), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 122/199 (61%), Positives = 157/199 (78%), Gaps = 1/199 (0%)
Query: 32 FSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPI 91
S +P+VIE +SRGERAYDI+SRLLKERII + + D A+++VAQLLFLE+ENP K I
Sbjct: 1 MSYVPIVIEPTSRGERAYDIYSRLLKERIIFVCSTVEDHMANLIVAQLLFLEAENPKKDI 60
Query: 92 HMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTI 151
+MY+NSPGG VTAGLAIYDTMQYI+ + T+C+GQA SMGSLLL G KG R +LP+S I
Sbjct: 61 YMYINSPGGVVTAGLAIYDTMQYIKPKVATLCIGQACSMGSLLLCGGEKGMRYSLPHSRI 120
Query: 152 MIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEA 211
MIHQPSGGY GQA D+ IH ++ +++ LN LY KHT Q ++ I+K+M+RD FM+PEEA
Sbjct: 121 MIHQPSGGYKGQATDIEIHAQETLKIKRLLNELYSKHTEQELQHIEKSMERDNFMSPEEA 180
Query: 212 KEFGIIDEVIDQRP-MALV 229
K+FG++D +I R MAL+
Sbjct: 181 KKFGLVDNIISSRDVMALL 199
>gi|359790768|ref|ZP_09293649.1| ATP-dependent Clp protease proteolytic subunit [Mesorhizobium
alhagi CCNWXJ12-2]
gi|359253256|gb|EHK56411.1| ATP-dependent Clp protease proteolytic subunit [Mesorhizobium
alhagi CCNWXJ12-2]
Length = 210
Score = 260 bits (664), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 116/196 (59%), Positives = 156/196 (79%)
Query: 31 SFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKP 90
+ +L+PMV+E ++RGERAYDIFSRLLKERII I GP+ D A +V AQLLFLE+ENP K
Sbjct: 8 AMNLVPMVVEQTNRGERAYDIFSRLLKERIIFITGPVEDGMATLVCAQLLFLEAENPKKE 67
Query: 91 IHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNST 150
I +Y+NSPGG VT+G+AIYDTMQ+I+ ++T+C+GQAASMGSLLL +G K R A PN+
Sbjct: 68 ISLYINSPGGVVTSGMAIYDTMQFIKPAVSTLCIGQAASMGSLLLCAGHKDMRFATPNAR 127
Query: 151 IMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEE 210
IM+HQPSGG+SGQA D+ H + I+++ LN +Y KHTG+ E I++ +DRD+F+T +E
Sbjct: 128 IMVHQPSGGFSGQASDIERHAQDIIKLKRRLNEVYVKHTGKDYETIERTLDRDHFLTADE 187
Query: 211 AKEFGIIDEVIDQRPM 226
AK+FG+ID+VI R +
Sbjct: 188 AKDFGLIDKVISSREL 203
>gi|78043074|ref|YP_359188.1| ATP-dependent Clp protease proteolytic subunit [Carboxydothermus
hydrogenoformans Z-2901]
gi|90101405|sp|Q3AF96.1|CLPP_CARHZ RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|77995189|gb|ABB14088.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Carboxydothermus hydrogenoformans Z-2901]
Length = 195
Score = 259 bits (663), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 118/191 (61%), Positives = 156/191 (81%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
L+P+VIE +SRGER+YDI+SRLLK+R I I GPI+D A++V+AQ+LFLE+E+P K IH+
Sbjct: 4 LVPIVIEQTSRGERSYDIWSRLLKDRTIFIGGPIDDHVANLVIAQMLFLEAEDPEKDIHL 63
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG +TAG+AIYDTMQYI+ ++TIC+GQAASMG+ LLA+G KG+R +LP + IMI
Sbjct: 64 YINSPGGVITAGMAIYDTMQYIKPDVSTICIGQAASMGAFLLAAGAKGKRFSLPYARIMI 123
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQP GG GQA D+ IH ++I+R+ D LN L KHTGQ E I+++ +RD+FM+ EAKE
Sbjct: 124 HQPLGGVQGQATDIDIHAREILRMRDMLNELLTKHTGQPKEKIERDTERDFFMSAAEAKE 183
Query: 214 FGIIDEVIDQR 224
+GIIDEVI R
Sbjct: 184 YGIIDEVITVR 194
>gi|120610146|ref|YP_969824.1| ATP-dependent Clp protease proteolytic subunit [Acidovorax citrulli
AAC00-1]
gi|326316315|ref|YP_004233987.1| ATP-dependent Clp protease proteolytic subunit [Acidovorax avenae
subsp. avenae ATCC 19860]
gi|166201794|sp|A1TM62.1|CLPP_ACIAC RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|120588610|gb|ABM32050.1| ATP-dependent Clp protease proteolytic subunit ClpP [Acidovorax
citrulli AAC00-1]
gi|323373151|gb|ADX45420.1| ATP-dependent Clp protease proteolytic subunit [Acidovorax avenae
subsp. avenae ATCC 19860]
Length = 202
Score = 259 bits (663), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 116/199 (58%), Positives = 156/199 (78%)
Query: 27 ISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESEN 86
+ ++ +IPMVIE S RGER+YDI+SRLLKERI+ + G +ND TA++VVAQLLFLESEN
Sbjct: 4 LETQALGMIPMVIEQSGRGERSYDIYSRLLKERIVFLIGEVNDQTANLVVAQLLFLESEN 63
Query: 87 PSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRAL 146
P K I Y+NSPGG VTAG+AIYDTMQ+I+ ++T+CLG AASMG+ LLA+G KG+R +L
Sbjct: 64 PDKDISFYINSPGGSVTAGMAIYDTMQFIKPDVSTMCLGFAASMGAFLLAAGAKGKRFSL 123
Query: 147 PNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFM 206
PNS IMIHQ GG GQA D+ IH + I+R D +N + + TGQ +E ++ + +RDYF+
Sbjct: 124 PNSKIMIHQVLGGARGQATDIEIHARDILRTKDQMNRILAERTGQPLEKVKADTERDYFL 183
Query: 207 TPEEAKEFGIIDEVIDQRP 225
T +EAKE+G++D+V+ QRP
Sbjct: 184 TADEAKEYGLVDQVVTQRP 202
>gi|409083034|gb|EKM83391.1| hypothetical protein AGABI1DRAFT_110056 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 247
Score = 259 bits (663), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 120/202 (59%), Positives = 159/202 (78%), Gaps = 7/202 (3%)
Query: 31 SFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKP 90
S +L+P+VIE + RGER+YDIFSRLL+ER+I ++GPI D A +VVAQLLFLE+E+ SKP
Sbjct: 39 SANLVPIVIEQTGRGERSYDIFSRLLRERVIMLHGPIRDTDATLVVAQLLFLEAEDSSKP 98
Query: 91 IHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNST 150
IH+Y+NSPGG VTAGLAIYDT+QY+ SPI+T +G AASMGSLLLA+G G+R LPN++
Sbjct: 99 IHLYINSPGGSVTAGLAIYDTVQYVSSPIHTYSIGIAASMGSLLLAAGENGKRHCLPNAS 158
Query: 151 IMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEV-------IQKNMDRD 203
IMIHQPSGG SGQA D+ IH K+I+R+ L ++Y KH Q E +K ++RD
Sbjct: 159 IMIHQPSGGASGQASDIAIHAKEILRIRQVLTSIYQKHCAQPAESEAEGLARFEKALERD 218
Query: 204 YFMTPEEAKEFGIIDEVIDQRP 225
Y+MT +EAK+FGI+D ++++RP
Sbjct: 219 YYMTAQEAKDFGIVDGILERRP 240
>gi|404493314|ref|YP_006717420.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pelobacter
carbinolicus DSM 2380]
gi|90183182|sp|Q3A3X5.1|CLPP_PELCD RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|77545370|gb|ABA88932.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pelobacter
carbinolicus DSM 2380]
Length = 194
Score = 259 bits (663), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 111/192 (57%), Positives = 159/192 (82%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
SLIPMV+E + RGERAYDIFSRLLK+RII + G ++D A++++AQ+LFLESE+P K I
Sbjct: 2 SLIPMVVEQTGRGERAYDIFSRLLKDRIIFLGGAVDDQVANLIIAQMLFLESEDPEKEIF 61
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
+Y+NSPGG VTAG+AIYDTMQY+R P++T+C+GQAASMG++LLA+G +G+R ALP++ IM
Sbjct: 62 LYINSPGGVVTAGMAIYDTMQYVRCPVSTLCVGQAASMGAVLLAAGGEGKRFALPHARIM 121
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQP GG+ GQA D+ IH ++I+R+ + LN + HTGQ++E I + +RD+FM EEAK
Sbjct: 122 IHQPWGGFQGQATDINIHAQEILRLRETLNGVLASHTGQTLEKIATDTERDFFMGSEEAK 181
Query: 213 EFGIIDEVIDQR 224
++GI+D+++ ++
Sbjct: 182 KYGIVDDIVKRK 193
>gi|18310375|ref|NP_562309.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
perfringens str. 13]
gi|110799833|ref|YP_696088.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
perfringens ATCC 13124]
gi|110803073|ref|YP_698704.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
perfringens SM101]
gi|168207806|ref|ZP_02633811.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
perfringens E str. JGS1987]
gi|168212102|ref|ZP_02637727.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
perfringens B str. ATCC 3626]
gi|168215325|ref|ZP_02640950.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
perfringens CPE str. F4969]
gi|168217824|ref|ZP_02643449.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
perfringens NCTC 8239]
gi|169342288|ref|ZP_02863366.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
perfringens C str. JGS1495]
gi|182627116|ref|ZP_02954834.1| CAAX amino terminal protease family protein [Clostridium
perfringens D str. JGS1721]
gi|422346059|ref|ZP_16426973.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
perfringens WAL-14572]
gi|422874317|ref|ZP_16920802.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
perfringens F262]
gi|21759067|sp|Q8XKK1.1|CLPP_CLOPE RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|123146116|sp|Q0ST53.1|CLPP_CLOPS RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|123148745|sp|Q0TQK2.1|CLPP_CLOP1 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|18145055|dbj|BAB81099.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
perfringens str. 13]
gi|110674480|gb|ABG83467.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
perfringens ATCC 13124]
gi|110683574|gb|ABG86944.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
perfringens SM101]
gi|169299615|gb|EDS81674.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
perfringens C str. JGS1495]
gi|170660863|gb|EDT13546.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
perfringens E str. JGS1987]
gi|170709986|gb|EDT22168.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
perfringens B str. ATCC 3626]
gi|170713287|gb|EDT25469.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
perfringens CPE str. F4969]
gi|177907505|gb|EDT70163.1| CAAX amino terminal protease family protein [Clostridium
perfringens D str. JGS1721]
gi|182380151|gb|EDT77630.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
perfringens NCTC 8239]
gi|373226681|gb|EHP49003.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
perfringens WAL-14572]
gi|380304794|gb|EIA17080.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
perfringens F262]
Length = 194
Score = 259 bits (663), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 114/192 (59%), Positives = 160/192 (83%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E +S+GER+YDIFSRLLK+RII ++G +ND TA++VVAQLLFLESE+P K IH
Sbjct: 3 NLVPMVVEQTSKGERSYDIFSRLLKDRIIMLSGEVNDVTANLVVAQLLFLESEDPDKDIH 62
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
+Y+NSPGG +T+G+AIYDTMQYI+ ++TIC+G AASMG+ LL+SG KG+R ALPN+ IM
Sbjct: 63 LYINSPGGSITSGMAIYDTMQYIKPDVSTICIGMAASMGAFLLSSGAKGKRFALPNAEIM 122
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQP GG+ GQA D+ IH K+I+++ D LN + ++T Q +E I+ +++RDYFM EA
Sbjct: 123 IHQPLGGFQGQATDIDIHAKRILKIKDKLNQILSENTNQPLEKIKVDVERDYFMEASEAV 182
Query: 213 EFGIIDEVIDQR 224
E+G+ID+VI+++
Sbjct: 183 EYGLIDKVIERK 194
>gi|343520826|ref|ZP_08757795.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Parvimonas
sp. oral taxon 393 str. F0440]
gi|343397784|gb|EGV10318.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Parvimonas
sp. oral taxon 393 str. F0440]
Length = 192
Score = 259 bits (663), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 118/191 (61%), Positives = 156/191 (81%)
Query: 32 FSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPI 91
+LIPMV+E ++RGER+YDI+SRLLKERII ++G +ND A ++VAQLLFLESE+P K I
Sbjct: 1 MALIPMVVEQTNRGERSYDIYSRLLKERIIFLSGEVNDQMADLIVAQLLFLESEDPKKDI 60
Query: 92 HMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTI 151
+Y+NSPGG V+AGLAIYDTMQYI+ ++TIC+G+AASMG+ LL SG KG+R ALPN+ I
Sbjct: 61 QIYINSPGGSVSAGLAIYDTMQYIKPDVSTICIGRAASMGAFLLTSGAKGKRFALPNADI 120
Query: 152 MIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEA 211
MIHQP GG GQA+D+ I ++I++V LN + K TGQS++ I+K+ DRD++MT EA
Sbjct: 121 MIHQPLGGAQGQAEDIRIQAQKILQVRATLNEILAKRTGQSLKKIEKDTDRDFYMTAHEA 180
Query: 212 KEFGIIDEVID 222
KE+GIIDEVI+
Sbjct: 181 KEYGIIDEVIE 191
>gi|239948026|ref|ZP_04699779.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Rickettsia
endosymbiont of Ixodes scapularis]
gi|239922302|gb|EER22326.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Rickettsia
endosymbiont of Ixodes scapularis]
Length = 201
Score = 259 bits (663), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 119/193 (61%), Positives = 152/193 (78%)
Query: 32 FSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPI 91
S +P+VIE +SRGERAYDI+SRLLKERII + + D +++VAQLLFLE+ENP K I
Sbjct: 1 MSYVPIVIEQTSRGERAYDIYSRLLKERIIFVCSTVEDHMTNLIVAQLLFLEAENPKKDI 60
Query: 92 HMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTI 151
+MY+NSPGG +TAGLAIYDTMQYI+ + T+C+GQA SMGSLLL G KG R +LP+S I
Sbjct: 61 YMYINSPGGVITAGLAIYDTMQYIKPKVATLCIGQACSMGSLLLCGGEKGMRYSLPHSRI 120
Query: 152 MIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEA 211
MIHQPSGGY GQA D+ IH ++ +++ LN LY KHT Q ++ I+K+M+RD FM+PEEA
Sbjct: 121 MIHQPSGGYKGQATDIEIHAQETLKIKRLLNELYSKHTRQELKHIEKSMERDNFMSPEEA 180
Query: 212 KEFGIIDEVIDQR 224
K+FGIID +I R
Sbjct: 181 KKFGIIDNIISSR 193
>gi|87201067|ref|YP_498324.1| ATP-dependent Clp protease proteolytic subunit [Novosphingobium
aromaticivorans DSM 12444]
gi|115311787|sp|Q2G3T3.1|CLPP_NOVAD RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|87136748|gb|ABD27490.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Novosphingobium aromaticivorans DSM 12444]
Length = 235
Score = 259 bits (663), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 119/193 (61%), Positives = 153/193 (79%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+LIP+V+E SSRGER++DI+SRLL+ERII + G + D A V++AQLLFLESENPSK I
Sbjct: 27 ALIPVVVEQSSRGERSFDIYSRLLRERIIFVTGEVEDHMASVIIAQLLFLESENPSKDIS 86
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
MY+NSPGG VTAGLAIYDTMQYIR ++T+C+GQAASMGS LLA+G G R ALPN+ IM
Sbjct: 87 MYINSPGGVVTAGLAIYDTMQYIRPRVSTVCIGQAASMGSFLLAAGEPGMRIALPNARIM 146
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQPSGG G A D+ I ++I+R+ +N LY K TG+S++ I+K MDRD F+ EEA
Sbjct: 147 IHQPSGGARGMASDIEIQAREILRIRKRMNDLYVKFTGRSLDEIEKAMDRDTFLEAEEAM 206
Query: 213 EFGIIDEVIDQRP 225
+FG++D+V + RP
Sbjct: 207 KFGLVDKVFESRP 219
>gi|451818368|ref|YP_007454569.1| ATP-dependent Clp protease proteolytic subunit ClpP [Clostridium
saccharoperbutylacetonicum N1-4(HMT)]
gi|451784347|gb|AGF55315.1| ATP-dependent Clp protease proteolytic subunit ClpP [Clostridium
saccharoperbutylacetonicum N1-4(HMT)]
Length = 199
Score = 259 bits (663), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 114/189 (60%), Positives = 157/189 (83%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E +SRGER+YDIFSRLLKERII ++G +NDDTA+++VAQLLFLESE+P K I
Sbjct: 2 ALVPMVVEQTSRGERSYDIFSRLLKERIIMLSGEVNDDTANLIVAQLLFLESEDPDKDIF 61
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
+Y+NSPGG +TAG AIYDTMQ+I+ ++TIC+G AASMG+ LL+ G KG+R ALPN+ +M
Sbjct: 62 LYINSPGGSITAGNAIYDTMQFIKCDVSTICIGMAASMGAFLLSCGAKGKRYALPNAEVM 121
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQP GG+ GQA D IH K+I+++ D LN + ++TG+ +EVI+ +++RD FM+ EEAK
Sbjct: 122 IHQPLGGFQGQATDFEIHAKRILKMKDTLNRILSENTGKPLEVIKADVERDNFMSAEEAK 181
Query: 213 EFGIIDEVI 221
+G+IDEV+
Sbjct: 182 NYGLIDEVM 190
>gi|28870881|ref|NP_793500.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
syringae pv. tomato str. DC3000]
gi|213968834|ref|ZP_03396975.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
syringae pv. tomato T1]
gi|424066809|ref|ZP_17804271.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
syringae pv. avellanae str. ISPaVe013]
gi|424071462|ref|ZP_17808887.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
syringae pv. avellanae str. ISPaVe037]
gi|443644728|ref|ZP_21128578.1| ATP-dependent Clp protease, proteolytic subunit [Pseudomonas
syringae pv. syringae B64]
gi|28854130|gb|AAO57195.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
syringae pv. tomato str. DC3000]
gi|213926437|gb|EEB59991.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
syringae pv. tomato T1]
gi|407998842|gb|EKG39240.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
syringae pv. avellanae str. ISPaVe037]
gi|408001926|gb|EKG42201.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
syringae pv. avellanae str. ISPaVe013]
gi|443284745|gb|ELS43750.1| ATP-dependent Clp protease, proteolytic subunit [Pseudomonas
syringae pv. syringae B64]
Length = 216
Score = 259 bits (663), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 115/193 (59%), Positives = 154/193 (79%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
L+PMVIE S+RGERAYDI+SRLLKER+I + GP+ D A+++ AQLLFLE+ENP K IH+
Sbjct: 22 LVPMVIEQSARGERAYDIYSRLLKERVIFMVGPVEDYMANLIAAQLLFLEAENPDKDIHL 81
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VTAG++IYDTMQ+I+ ++TIC+GQA SMG+ LLA G +G+R LPNS +MI
Sbjct: 82 YINSPGGSVTAGMSIYDTMQFIKPDVSTICIGQACSMGAFLLAGGAEGKRHCLPNSRMMI 141
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQP GG+ GQA D+ IH K+I+ + LN+L HTGQS+E I+++ +RD FM+ E A E
Sbjct: 142 HQPLGGFQGQASDIDIHAKEILHIRHRLNSLLAHHTGQSLETIERDTERDNFMSAERAAE 201
Query: 214 FGIIDEVIDQRPM 226
+G+ID VI++R M
Sbjct: 202 YGLIDSVINKRQM 214
>gi|229586800|ref|YP_002845301.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia africae
ESF-5]
gi|228021850|gb|ACP53558.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia africae
ESF-5]
Length = 216
Score = 259 bits (663), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 121/199 (60%), Positives = 157/199 (78%), Gaps = 1/199 (0%)
Query: 32 FSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPI 91
S +P+VIE +SRGERAYDI+SRLLKERII + + D A+++VAQLLFLE+ENP K I
Sbjct: 16 MSYVPIVIEPTSRGERAYDIYSRLLKERIIFVCSTVEDHMANLIVAQLLFLEAENPKKDI 75
Query: 92 HMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTI 151
+MY+NSPGG VTAGLAIYDTMQYI+ + T+C+GQA SMGSLLL G KG R +LP+S I
Sbjct: 76 YMYINSPGGVVTAGLAIYDTMQYIKPKVATLCIGQACSMGSLLLCGGEKGMRYSLPHSRI 135
Query: 152 MIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEA 211
MIHQPSGGY GQA D+ IH ++ +++ LN LY KHT Q ++ I+K+M+RD FM+PEEA
Sbjct: 136 MIHQPSGGYKGQATDIEIHAQETLKIKRLLNELYSKHTEQELKHIEKSMERDNFMSPEEA 195
Query: 212 KEFGIIDEVIDQR-PMALV 229
K+FG++D ++ R MAL+
Sbjct: 196 KKFGLVDNILSSRDAMALL 214
>gi|357031709|ref|ZP_09093652.1| ATP-dependent Clp protease proteolytic subunit [Gluconobacter
morbifer G707]
gi|356414939|gb|EHH68583.1| ATP-dependent Clp protease proteolytic subunit [Gluconobacter
morbifer G707]
Length = 204
Score = 259 bits (663), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 115/195 (58%), Positives = 156/195 (80%)
Query: 31 SFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKP 90
S SL+PMV+E +SRGERA+DI+SRLL+ERII + GP+ D + ++ AQLL+LES NP+K
Sbjct: 3 SNSLVPMVVEQTSRGERAFDIYSRLLQERIIFLTGPVYDQVSSLICAQLLYLESVNPTKE 62
Query: 91 IHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNST 150
I Y+NSPGG V+AGLAIYDTMQYIR P++T+C+GQAASMGSLLLA G K R ALPN+
Sbjct: 63 ISFYINSPGGVVSAGLAIYDTMQYIRCPVSTVCIGQAASMGSLLLAGGEKNHRYALPNAR 122
Query: 151 IMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEE 210
+M+HQPSGG GQA D+ I ++I+ + LN +Y +HTGQ++E I++ ++RD +++ EE
Sbjct: 123 VMVHQPSGGAQGQASDIEIQAREILIIRQRLNEIYREHTGQTLEQIERKLERDSYLSAEE 182
Query: 211 AKEFGIIDEVIDQRP 225
AKEFG+IDEV+ + P
Sbjct: 183 AKEFGLIDEVVRRHP 197
>gi|327398620|ref|YP_004339489.1| ATP-dependent Clp protease proteolytic subunit [Hippea maritima DSM
10411]
gi|327181249|gb|AEA33430.1| ATP-dependent Clp protease proteolytic subunit [Hippea maritima DSM
10411]
Length = 205
Score = 259 bits (663), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 119/193 (61%), Positives = 157/193 (81%)
Query: 32 FSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPI 91
+L+P+VIE + +GERAYDI+SRLLK+RII +NG INDD ++V+V+QLLFLESE+P K I
Sbjct: 1 MNLVPIVIEKTPQGERAYDIYSRLLKDRIIMLNGEINDDVSNVIVSQLLFLESEDPEKDI 60
Query: 92 HMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTI 151
+Y+NSPGG VTAGLAIYDTMQYI+ + TIC+G AASMG+LLLASGTKG+R +LP+S I
Sbjct: 61 FLYINSPGGSVTAGLAIYDTMQYIKCDVTTICIGSAASMGALLLASGTKGKRYSLPHSRI 120
Query: 152 MIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEA 211
MIHQP GG SGQA ++ IH K+I+R+ LN + KHTG+ ++ I+K+ +RDYFM +EA
Sbjct: 121 MIHQPLGGISGQATEIEIHAKEILRLKKLLNEILAKHTGKRLKTIEKDTERDYFMDTKEA 180
Query: 212 KEFGIIDEVIDQR 224
+GIID++I R
Sbjct: 181 LAYGIIDKIIYSR 193
>gi|254428693|ref|ZP_05042400.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Alcanivorax
sp. DG881]
gi|196194862|gb|EDX89821.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Alcanivorax
sp. DG881]
Length = 244
Score = 259 bits (663), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 113/196 (57%), Positives = 158/196 (80%)
Query: 31 SFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKP 90
+ L+P+VIE ++RGER++DI+SRLLKER+I + G + D A+++VAQ+LFLESENP K
Sbjct: 49 NLGLVPVVIEQTARGERSFDIYSRLLKERVIFMIGQVEDHMANLIVAQMLFLESENPDKD 108
Query: 91 IHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNST 150
IH+Y+NSPGG VTAG++IYDTMQ+I+ ++T+C+GQAASMG+ LL +G G+R ALPN+
Sbjct: 109 IHLYINSPGGSVTAGMSIYDTMQFIKPDVSTMCVGQAASMGAFLLTAGATGKRFALPNAR 168
Query: 151 IMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEE 210
+MIHQP GG+ GQA D+ IH K+I+++ LN+L HTGQ IE ++K+ DRD FM+ +E
Sbjct: 169 VMIHQPLGGFQGQASDIEIHAKEILKIKGQLNSLLAHHTGQPIEQLEKDTDRDNFMSADE 228
Query: 211 AKEFGIIDEVIDQRPM 226
AKE+GIID V+ QRP+
Sbjct: 229 AKEYGIIDAVLSQRPV 244
>gi|110834071|ref|YP_692930.1| ATP-dependent Clp protease, proteolytic subunitclpp [Alcanivorax
borkumensis SK2]
gi|110647182|emb|CAL16658.1| ATP-dependent Clp protease, proteolytic subunitClpP [Alcanivorax
borkumensis SK2]
Length = 218
Score = 259 bits (663), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 113/196 (57%), Positives = 158/196 (80%)
Query: 31 SFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKP 90
+ L+P+VIE ++RGER++DI+SRLLKER+I + G + D A+++VAQ+LFLESENP K
Sbjct: 23 NLGLVPVVIEQTARGERSFDIYSRLLKERVIFMIGQVEDHMANLIVAQMLFLESENPDKD 82
Query: 91 IHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNST 150
IH+Y+NSPGG VTAG++IYDTMQ+I+ ++T+C+GQAASMG+ LL +G G+R ALPN+
Sbjct: 83 IHLYINSPGGSVTAGMSIYDTMQFIKPDVSTMCIGQAASMGAFLLTAGAAGKRFALPNAR 142
Query: 151 IMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEE 210
+MIHQP GG+ GQA D+ IH K+I+++ LN+L HTGQ IE ++K+ DRD FM+ +E
Sbjct: 143 VMIHQPLGGFQGQASDIEIHAKEILKIKGQLNSLLAHHTGQPIEQLEKDTDRDNFMSADE 202
Query: 211 AKEFGIIDEVIDQRPM 226
AKE+GIID V+ QRP+
Sbjct: 203 AKEYGIIDAVLSQRPV 218
>gi|261855007|ref|YP_003262290.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Halothiobacillus neapolitanus c2]
gi|261835476|gb|ACX95243.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Halothiobacillus neapolitanus c2]
Length = 210
Score = 259 bits (662), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 113/192 (58%), Positives = 157/192 (81%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E +SRGERAYDI+SRLLKER++ + GPI D A+++VAQLLFLESENP K IH
Sbjct: 18 ALVPMVVEQTSRGERAYDIYSRLLKERVVFVVGPIEDHMANLIVAQLLFLESENPDKDIH 77
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
+Y+NSPGG VTAG++IYDTMQ+I+ ++T+C+GQAASMGS+LL+ G G+R ALPNS +M
Sbjct: 78 LYINSPGGVVTAGMSIYDTMQFIKPHVSTLCIGQAASMGSILLSGGEPGKRFALPNSRVM 137
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQP GG+ GQA D+ IH ++I+++ +LN + KH Q +EVI+++ DRD F++ EA
Sbjct: 138 IHQPLGGFQGQASDIKIHAEEIIKLRHSLNGVLAKHCNQPMEVIERDTDRDKFLSASEAV 197
Query: 213 EFGIIDEVIDQR 224
E+G+ID V+D+R
Sbjct: 198 EYGLIDAVLDKR 209
>gi|379713794|ref|YP_005302132.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia
massiliae str. AZT80]
gi|383481626|ref|YP_005390541.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia
rhipicephali str. 3-7-female6-CWPP]
gi|376334440|gb|AFB31672.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia
massiliae str. AZT80]
gi|378933965|gb|AFC72468.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia
rhipicephali str. 3-7-female6-CWPP]
Length = 201
Score = 259 bits (662), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 121/199 (60%), Positives = 158/199 (79%), Gaps = 1/199 (0%)
Query: 32 FSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPI 91
S +P+VIE +SRGERAYDI+SRLLKERII + + D A+++VAQLLFLE+ENP K I
Sbjct: 1 MSYVPIVIEPTSRGERAYDIYSRLLKERIIFVCSTVEDHMANLIVAQLLFLEAENPKKDI 60
Query: 92 HMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTI 151
++Y+NSPGG VTAGLAIYDTMQYI+ + T+C+GQA SMGSLLL G +G R +LP+S I
Sbjct: 61 YIYINSPGGVVTAGLAIYDTMQYIKPKVATLCIGQACSMGSLLLCGGEQGMRYSLPHSRI 120
Query: 152 MIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEA 211
MIHQPSGGY GQA D+ IH ++ +++ LN LY KHTGQ ++ I+K+M+RD FM+PEEA
Sbjct: 121 MIHQPSGGYKGQATDIEIHAQETLKIKRLLNELYSKHTGQELKHIEKSMERDNFMSPEEA 180
Query: 212 KEFGIIDEVIDQRP-MALV 229
K+FG++D +I R MAL+
Sbjct: 181 KKFGLVDNIISSRDVMALL 199
>gi|374619902|ref|ZP_09692436.1| ATP-dependent Clp protease, proteolytic subunit ClpP [gamma
proteobacterium HIMB55]
gi|374303129|gb|EHQ57313.1| ATP-dependent Clp protease, proteolytic subunit ClpP [gamma
proteobacterium HIMB55]
Length = 205
Score = 259 bits (662), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 117/195 (60%), Positives = 157/195 (80%)
Query: 30 RSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSK 89
++ L+PMVIE +SRGER++DI+SRLLKER+I I GPI D A++VVAQLLFLESENP K
Sbjct: 11 QALGLVPMVIEQTSRGERSFDIYSRLLKERVIFIVGPIEDQMANLVVAQLLFLESENPDK 70
Query: 90 PIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNS 149
IH+Y+NSPGG VTAGL+IYDTMQ+I+ ++T+CLGQAASMG+ LL+ GTKG+R LPN+
Sbjct: 71 DIHIYINSPGGSVTAGLSIYDTMQFIKPEVSTMCLGQAASMGAFLLSGGTKGKRLILPNA 130
Query: 150 TIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPE 209
MIHQPSGG GQA D+ I K+I+ + + LN L HTGQS++VI+++ +RD FM+ E
Sbjct: 131 RTMIHQPSGGAQGQATDIEIQAKEILFLRERLNRLLADHTGQSLDVIEQDTERDRFMSAE 190
Query: 210 EAKEFGIIDEVIDQR 224
++ E+G++D+VI R
Sbjct: 191 QSVEYGLVDQVISAR 205
>gi|389879842|ref|YP_006382072.1| ATP-dependent Clp protease proteolytic subunit [Tistrella mobilis
KA081020-065]
gi|388531232|gb|AFK56427.1| ATP-dependent Clp protease proteolytic subunit [Tistrella mobilis
KA081020-065]
Length = 198
Score = 259 bits (662), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 112/195 (57%), Positives = 158/195 (81%)
Query: 31 SFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKP 90
+ L+PMV+E S+RGERA+DI+SRLLKERII +NG ++DD A VV AQLLFLE+E+P +P
Sbjct: 4 TMQLVPMVVEQSTRGERAFDIYSRLLKERIIFLNGQVDDDVAAVVCAQLLFLEAEDPGRP 63
Query: 91 IHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNST 150
I++Y+NSPGG VT+G A+YDTM+YIRSP++T+C+G A SMGS LL +GT GER ALPN++
Sbjct: 64 INLYINSPGGVVTSGFAMYDTMRYIRSPVHTLCMGTARSMGSFLLMAGTAGERAALPNAS 123
Query: 151 IMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEE 210
I++HQPSGG+ GQA D+ IH ++ +RV + LY +H ++ E +++ +DRD FMT EE
Sbjct: 124 ILVHQPSGGFQGQASDILIHAEETLRVKQRMIRLYAEHCHRTPEEVERTLDRDRFMTAEE 183
Query: 211 AKEFGIIDEVIDQRP 225
A ++G+ID ++D+RP
Sbjct: 184 ALDWGLIDRILDRRP 198
>gi|116243127|sp|Q0VQ90.2|CLPP_ALCBS RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
Length = 205
Score = 259 bits (662), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 113/196 (57%), Positives = 158/196 (80%)
Query: 31 SFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKP 90
+ L+P+VIE ++RGER++DI+SRLLKER+I + G + D A+++VAQ+LFLESENP K
Sbjct: 10 NLGLVPVVIEQTARGERSFDIYSRLLKERVIFMIGQVEDHMANLIVAQMLFLESENPDKD 69
Query: 91 IHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNST 150
IH+Y+NSPGG VTAG++IYDTMQ+I+ ++T+C+GQAASMG+ LL +G G+R ALPN+
Sbjct: 70 IHLYINSPGGSVTAGMSIYDTMQFIKPDVSTMCIGQAASMGAFLLTAGAAGKRFALPNAR 129
Query: 151 IMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEE 210
+MIHQP GG+ GQA D+ IH K+I+++ LN+L HTGQ IE ++K+ DRD FM+ +E
Sbjct: 130 VMIHQPLGGFQGQASDIEIHAKEILKIKGQLNSLLAHHTGQPIEQLEKDTDRDNFMSADE 189
Query: 211 AKEFGIIDEVIDQRPM 226
AKE+GIID V+ QRP+
Sbjct: 190 AKEYGIIDAVLSQRPV 205
>gi|405365022|ref|ZP_11026468.1| ATP-dependent Clp protease proteolytic subunit [Chondromyces
apiculatus DSM 436]
gi|397089587|gb|EJJ20496.1| ATP-dependent Clp protease proteolytic subunit [Myxococcus sp.
(contaminant ex DSM 436)]
Length = 206
Score = 259 bits (662), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 124/208 (59%), Positives = 161/208 (77%), Gaps = 4/208 (1%)
Query: 32 FSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPI 91
F +P VIE + RGER+YDI+SRLLK+RI+ + I+DD A+V+VAQLLFLESE+P K I
Sbjct: 3 FMPVPYVIEQTHRGERSYDIYSRLLKDRIVMLGTEIDDDVANVIVAQLLFLESEDPDKDI 62
Query: 92 HMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTI 151
++Y+NSPGG VTAGLAIYDTMQY++ P++TIC+GQAASMG++LL +G KG+R ALP+S I
Sbjct: 63 NLYINSPGGSVTAGLAIYDTMQYVKCPVSTICVGQAASMGAVLLLAGAKGKRYALPSSRI 122
Query: 152 MIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEA 211
MIHQP GG GQA D+ I K+I+R+ LN L KHT QSIE ++K+ DRDYFM EA
Sbjct: 123 MIHQPLGGVRGQATDIEIQAKEILRMKAKLNELIVKHTAQSIERVEKDTDRDYFMGASEA 182
Query: 212 KEFGIIDEVIDQRPMALVTDAVGREGKE 239
K +GIIDE+ Q P +V +G+E K+
Sbjct: 183 KAYGIIDEI--QNPRKVV--GLGKEEKK 206
>gi|110633522|ref|YP_673730.1| ATP-dependent Clp protease proteolytic subunit [Chelativorans sp.
BNC1]
gi|116243101|sp|Q11J60.1|CLPP1_MESSB RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|110284506|gb|ABG62565.1| ATP-dependent Clp protease proteolytic subunit ClpP [Chelativorans
sp. BNC1]
Length = 210
Score = 259 bits (662), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 114/194 (58%), Positives = 154/194 (79%)
Query: 31 SFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKP 90
+ +L+PMV+E ++RGERAYDIFSRLLKERII I GP+ D A +V AQLLFLE+ENP K
Sbjct: 8 AMNLVPMVVEQTNRGERAYDIFSRLLKERIIFITGPVEDGMATLVCAQLLFLEAENPKKE 67
Query: 91 IHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNST 150
I +Y+NSPGG VT+G+AIYDTMQ+I+ P++T+C+GQAASMGSLLL +G K R A PN+
Sbjct: 68 IALYINSPGGVVTSGMAIYDTMQFIQPPVSTLCIGQAASMGSLLLCAGHKDMRFATPNAR 127
Query: 151 IMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEE 210
+M+HQPSGG+ GQA D+ H + I+++ LN +Y KHTGQ + I++ +DRD+FMT +E
Sbjct: 128 VMVHQPSGGFQGQASDIERHAQDIIKLKRRLNEIYVKHTGQDYDTIERTLDRDHFMTADE 187
Query: 211 AKEFGIIDEVIDQR 224
A+ FG++D VI +R
Sbjct: 188 AQAFGLVDRVISER 201
>gi|300023469|ref|YP_003756080.1| endopeptidase Clp [Hyphomicrobium denitrificans ATCC 51888]
gi|299525290|gb|ADJ23759.1| Endopeptidase Clp [Hyphomicrobium denitrificans ATCC 51888]
Length = 217
Score = 259 bits (662), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 117/198 (59%), Positives = 154/198 (77%)
Query: 27 ISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESEN 86
I+ + + PMV+E ++RGER YD+ SRLLKERII + GP+ D A + QLLFLESEN
Sbjct: 5 INTVTNTFWPMVVEQTTRGERGYDLPSRLLKERIIFVTGPVEDHMAASICMQLLFLESEN 64
Query: 87 PSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRAL 146
P K I MY+NSPGG VTAG+AIYDTMQ+++ P+ T+C+GQAASMGSLLL +G K R AL
Sbjct: 65 PKKEISMYINSPGGVVTAGMAIYDTMQFVKPPVATLCIGQAASMGSLLLCAGAKDMRFAL 124
Query: 147 PNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFM 206
PN+ IM+HQPSGG+SGQA D+ H + I+++ LN Y KHTGQS E+I+K +DRDYFM
Sbjct: 125 PNARIMVHQPSGGFSGQASDIERHAEDIIKMKRRLNETYVKHTGQSYEMIEKTLDRDYFM 184
Query: 207 TPEEAKEFGIIDEVIDQR 224
T ++A++FGIID+V++ R
Sbjct: 185 TADQARDFGIIDKVLESR 202
>gi|148284741|ref|YP_001248831.1| ATP-dependent protease proteolytic subunit [Orientia tsutsugamushi
str. Boryong]
gi|189183283|ref|YP_001937068.1| ATP-dependent Clp protease proteolytic subunit [Orientia
tsutsugamushi str. Ikeda]
gi|146740180|emb|CAM80416.1| ATP-dependent protease proteolytic subunit [Orientia tsutsugamushi
str. Boryong]
gi|189180054|dbj|BAG39834.1| ATP-dependent Clp protease proteolytic subunit [Orientia
tsutsugamushi str. Ikeda]
Length = 206
Score = 259 bits (662), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 117/190 (61%), Positives = 152/190 (80%)
Query: 35 IPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHMY 94
+PMV+E ++RGERAYDI+SRLLKERI+ + G I D A++VVAQLLFLE+E+P K I MY
Sbjct: 10 VPMVVEQTNRGERAYDIYSRLLKERIVFVCGEIEDHMANLVVAQLLFLEAESPDKKIFMY 69
Query: 95 LNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMIH 154
+NSPGG VTAG+AIYDTMQYI+SP+ T+CLGQA SMGSLLLA+G K R LPNS IMIH
Sbjct: 70 INSPGGAVTAGMAIYDTMQYIKSPVLTLCLGQACSMGSLLLAAGQKSMRHCLPNSRIMIH 129
Query: 155 QPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKEF 214
QPSGG+ GQA D+ IH ++I+++ +N LY HT Q ++VI+++M+RD FM P AKEF
Sbjct: 130 QPSGGFRGQATDIQIHAQEILKMKKIINNLYVHHTNQPLQVIEESMERDNFMDPVAAKEF 189
Query: 215 GIIDEVIDQR 224
G++D + +R
Sbjct: 190 GLVDHITTER 199
>gi|383784111|ref|YP_005468680.1| ATP-dependent Clp protease, proteolytic subunit [Leptospirillum
ferrooxidans C2-3]
gi|383083023|dbj|BAM06550.1| ATP-dependent Clp protease, proteolytic subunit [Leptospirillum
ferrooxidans C2-3]
Length = 200
Score = 259 bits (662), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 113/188 (60%), Positives = 159/188 (84%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
LIPMV+EH+SRGER+YDI+SRLLKERII + PI+D+ A++V+AQLLFLESE+ SK I++
Sbjct: 2 LIPMVVEHTSRGERSYDIYSRLLKERIIFLGTPIDDNVANLVIAQLLFLESEDASKDINI 61
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VTAG AIYDTMQYI+ ++TIC+GQAASMG+ LLA+G KG+R ALPN+ +MI
Sbjct: 62 YINSPGGVVTAGFAIYDTMQYIKPDVSTICVGQAASMGAFLLAAGAKGKRFALPNARVMI 121
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQP GG+ GQA D+ IH K+I+++ LN L HTGQ+++ I+++ +RDYF++ +E+K+
Sbjct: 122 HQPLGGFQGQATDIAIHAKEILKMKSHLNELLAHHTGQALQRIEQDTERDYFLSADESKD 181
Query: 214 FGIIDEVI 221
+G++D+V+
Sbjct: 182 YGLVDKVM 189
>gi|319763664|ref|YP_004127601.1| ATP-dependent clp protease, proteolytic subunit clpp
[Alicycliphilus denitrificans BC]
gi|330824071|ref|YP_004387374.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Alicycliphilus denitrificans K601]
gi|317118225|gb|ADV00714.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Alicycliphilus denitrificans BC]
gi|329309443|gb|AEB83858.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Alicycliphilus denitrificans K601]
Length = 202
Score = 259 bits (662), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 116/199 (58%), Positives = 156/199 (78%)
Query: 27 ISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESEN 86
+ ++ +IPMVIE S RGER+YDI+SRLLKER+I + G +ND TA++VVAQLLFLESEN
Sbjct: 4 LETQALGMIPMVIEQSGRGERSYDIYSRLLKERVIFLVGEVNDQTANLVVAQLLFLESEN 63
Query: 87 PSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRAL 146
P K I Y+NSPGG VTAG+AIYDTMQ+I+ ++T+C G AASMG+ LLA+G KG+R +L
Sbjct: 64 PDKDISFYINSPGGSVTAGMAIYDTMQFIKPDVSTLCCGFAASMGAFLLAAGAKGKRFSL 123
Query: 147 PNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFM 206
PNS IMIHQ GG GQA D+ IH + I+R D +N + + TGQSIE ++ + +RDYFM
Sbjct: 124 PNSKIMIHQVLGGARGQATDIEIHARDILRTKDQMNRILAERTGQSIEKVKADTERDYFM 183
Query: 207 TPEEAKEFGIIDEVIDQRP 225
T +EA+++G++D+VI +RP
Sbjct: 184 TADEARDYGLVDQVISKRP 202
>gi|395512929|ref|XP_003760685.1| PREDICTED: putative ATP-dependent Clp protease proteolytic subunit,
mitochondrial [Sarcophilus harrisii]
Length = 332
Score = 259 bits (662), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 123/212 (58%), Positives = 162/212 (76%), Gaps = 8/212 (3%)
Query: 22 KPSAQISARSF--------SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAH 73
+P A ++ RS LIP+V+E + RGERAYDI+SRLL+ERIIC+ GPI+D A
Sbjct: 98 RPWAGLAFRSLHGTPTWARPLIPIVVEQTGRGERAYDIYSRLLRERIICVMGPIDDSLAS 157
Query: 74 VVVAQLLFLESENPSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSL 133
+V+AQLLFL+SE+ KPIHMY+NSPGG VT+GLAIYDTMQYI +P++T C+GQAASMGSL
Sbjct: 158 LVIAQLLFLQSESNKKPIHMYINSPGGIVTSGLAIYDTMQYILNPVSTWCVGQAASMGSL 217
Query: 134 LLASGTKGERRALPNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSI 193
LLA+G G R +LPNS IMIHQPSGG GQA D+ I ++I+++ L +Y KHT Q +
Sbjct: 218 LLAAGCPGMRHSLPNSRIMIHQPSGGARGQATDIAIQAEEIMKLKKQLYGIYAKHTKQPL 277
Query: 194 EVIQKNMDRDYFMTPEEAKEFGIIDEVIDQRP 225
+VI+ M+RD +M+P EA+EFGI+D+V+ P
Sbjct: 278 DVIEAAMERDRYMSPMEAQEFGILDKVLVHPP 309
>gi|347730688|ref|ZP_08863801.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Desulfovibrio
sp. A2]
gi|347520543|gb|EGY27675.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Desulfovibrio
sp. A2]
Length = 201
Score = 259 bits (662), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 118/190 (62%), Positives = 150/190 (78%)
Query: 35 IPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHMY 94
+P+VIE S R ERAYDI+SRLLK+RII + PI+D A ++ AQLLFLESENP K I++Y
Sbjct: 3 VPIVIETSGRSERAYDIYSRLLKDRIILLGTPIDDQIASLICAQLLFLESENPEKEIYLY 62
Query: 95 LNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMIH 154
+NSPGG VTAG+AIYDTMQYI SP+ T+CLGQAASMG+LLLA+G G R ALPNS IMIH
Sbjct: 63 INSPGGAVTAGMAIYDTMQYITSPVATLCLGQAASMGALLLAAGEPGMRHALPNSRIMIH 122
Query: 155 QPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKEF 214
QPSGG+SGQA D+ I ++++R+ LN + +HTGQ +E + + +RDYFM P EAKE+
Sbjct: 123 QPSGGFSGQASDIDIQAREVLRMKANLNDIMARHTGQPVERVADDTERDYFMGPAEAKEY 182
Query: 215 GIIDEVIDQR 224
GIID ++ R
Sbjct: 183 GIIDSILTSR 192
>gi|403252433|ref|ZP_10918743.1| ATP-dependent Clp protease proteolytic subunit [Thermotoga sp. EMP]
gi|402812446|gb|EJX26925.1| ATP-dependent Clp protease proteolytic subunit [Thermotoga sp. EMP]
Length = 201
Score = 259 bits (662), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 115/190 (60%), Positives = 156/190 (82%)
Query: 35 IPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHMY 94
+P+V+E + R ERAYDIFSRLLK+RI+ + PI+D A++V+AQLLFLE+E+P K +++Y
Sbjct: 11 VPIVVESTGRYERAYDIFSRLLKDRIVFLGSPIDDHVANLVIAQLLFLEAEDPDKDVYLY 70
Query: 95 LNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMIH 154
+NSPGG VTAGLAIYDTMQYI+ ++TIC+GQAASM ++LLA+G KG+R ALPN+ IMIH
Sbjct: 71 INSPGGSVTAGLAIYDTMQYIKCDVSTICVGQAASMAAVLLAAGAKGKRYALPNARIMIH 130
Query: 155 QPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKEF 214
QP GG G AKD+ I T++++R+ D LN + KHTGQ IE I+K+ DRD+FM+ EEAKE+
Sbjct: 131 QPLGGAEGPAKDVEIITRELLRIKDLLNRILSKHTGQPIEKIEKDTDRDFFMSAEEAKEY 190
Query: 215 GIIDEVIDQR 224
GI+D+V+ R
Sbjct: 191 GIVDKVVSTR 200
>gi|358637944|dbj|BAL25241.1| ATP-dependent Clp protease proteolytic subunit [Azoarcus sp. KH32C]
Length = 212
Score = 259 bits (662), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 115/196 (58%), Positives = 155/196 (79%)
Query: 32 FSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPI 91
++PMVIE S RGERAYDI+SRLLKER++ + GP+ND TA+++VAQLLFLESENP K I
Sbjct: 17 LGMVPMVIEQSGRGERAYDIYSRLLKERVVFLVGPVNDVTANLIVAQLLFLESENPDKDI 76
Query: 92 HMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTI 151
Y+NSPGG V+AG+AIYDTMQ+++ ++T+C+GQAASMGS LLA+G KG+R LPNS +
Sbjct: 77 FFYINSPGGSVSAGMAIYDTMQFVKPDVSTLCIGQAASMGSFLLAAGAKGKRFCLPNSRV 136
Query: 152 MIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEA 211
MIHQP GG+ GQA D+ IH ++I+ + LN + KHTGQ +E I+K+ DRD FM+ ++A
Sbjct: 137 MIHQPLGGFQGQASDIEIHAREILNIRARLNEMLAKHTGQPVERIEKDTDRDNFMSAKDA 196
Query: 212 KEFGIIDEVIDQRPMA 227
E+GI+D+V+ R A
Sbjct: 197 LEYGIVDKVLTTRAEA 212
>gi|398840797|ref|ZP_10598029.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
sp. GM102]
gi|398860148|ref|ZP_10615806.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
sp. GM79]
gi|398903999|ref|ZP_10652021.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
sp. GM50]
gi|398109809|gb|EJL99725.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
sp. GM102]
gi|398176428|gb|EJM64147.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
sp. GM50]
gi|398235353|gb|EJN21184.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
sp. GM79]
Length = 211
Score = 259 bits (662), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 112/192 (58%), Positives = 156/192 (81%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
L+PMV+E S+RGERAYDI+SRLLKER+I + GP+ D A+++ AQLLFLE+ENP K IH+
Sbjct: 19 LVPMVVEQSARGERAYDIYSRLLKERVIFLVGPVEDYMANLICAQLLFLEAENPDKDIHL 78
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VTAG++IYDTMQ+I+ ++T C+GQA SMG+ LL +G +G+R LPNS +MI
Sbjct: 79 YINSPGGSVTAGMSIYDTMQFIKPNVSTTCIGQACSMGAFLLTAGAQGKRYCLPNSRVMI 138
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQP GG+ GQA D+ IH K+I+ + + LN L KH+G+++E I+++ +RD FM+ E A+E
Sbjct: 139 HQPLGGFQGQASDIEIHAKEILFIRERLNTLMAKHSGRTLEEIERDTNRDNFMSAEAARE 198
Query: 214 FGIIDEVIDQRP 225
+G+IDEVI+QRP
Sbjct: 199 YGLIDEVINQRP 210
>gi|114777030|ref|ZP_01452050.1| ATP-dependent Clp protease proteolytic subunit [Mariprofundus
ferrooxydans PV-1]
gi|114552551|gb|EAU55011.1| ATP-dependent Clp protease proteolytic subunit [Mariprofundus
ferrooxydans PV-1]
Length = 207
Score = 259 bits (662), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 116/196 (59%), Positives = 159/196 (81%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+P V+E +SRGERAYDIFSRLLKERI+ +NG ++D TA++++AQLLFLESE P K I+
Sbjct: 2 NLVPTVVEQTSRGERAYDIFSRLLKERIVFLNGQVDDHTANLIIAQLLFLESEGPDKDIY 61
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
MY+NSPGG VT+GLAIYDTMQYIR ++T+C+GQAASMG+ LLASG G+R +LPNS IM
Sbjct: 62 MYINSPGGVVTSGLAIYDTMQYIRCDVSTLCIGQAASMGAHLLASGAPGKRFSLPNSRIM 121
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQP GG+ GQA D+ IH ++I+ + + LN + KHTGQ IE + +++RDYF+T ++A
Sbjct: 122 IHQPLGGFQGQATDIEIHAREILSLKNRLNEMMAKHTGQPIEKLADDVERDYFLTADQAC 181
Query: 213 EFGIIDEVIDQRPMAL 228
E+G++D+V+ R A+
Sbjct: 182 EYGLVDKVLSSRAEAV 197
>gi|389681563|ref|ZP_10172908.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
chlororaphis O6]
gi|399007987|ref|ZP_10710481.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
sp. GM17]
gi|425900381|ref|ZP_18876972.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
chlororaphis subsp. aureofaciens 30-84]
gi|388555099|gb|EIM18347.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
chlororaphis O6]
gi|397889629|gb|EJL06111.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
chlororaphis subsp. aureofaciens 30-84]
gi|398119027|gb|EJM08743.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
sp. GM17]
Length = 213
Score = 259 bits (662), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 116/193 (60%), Positives = 152/193 (78%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
L+PMVIE S+RGERAYDI+SRLLKER+I + GP+ D A++V AQLLFLE+ENP K IH+
Sbjct: 19 LVPMVIEQSARGERAYDIYSRLLKERVIFLIGPVEDYMANLVAAQLLFLEAENPDKDIHL 78
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VTAG++IYDTMQ+I+ ++TIC+GQA SMG+ LLA G G+R LPNS +MI
Sbjct: 79 YINSPGGSVTAGMSIYDTMQFIKPDVSTICIGQACSMGAFLLAGGAAGKRHCLPNSRMMI 138
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQP GG+ GQA D+ IH K+I+ + LN+L HTGQS+E I+++ +RD FM+ E A E
Sbjct: 139 HQPLGGFQGQASDIDIHAKEILHIRSRLNSLLAHHTGQSLETIERDTERDNFMSAERAAE 198
Query: 214 FGIIDEVIDQRPM 226
+G+ID VI +R M
Sbjct: 199 YGLIDSVITKRQM 211
>gi|56478265|ref|YP_159854.1| ATP-dependent Clp protease proteolytic subunit [Aromatoleum
aromaticum EbN1]
gi|67460188|sp|Q5P161.1|CLPP_AZOSE RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|56314308|emb|CAI08953.1| ATP-dependent Clp protease proteolytic subunit [Aromatoleum
aromaticum EbN1]
Length = 212
Score = 259 bits (662), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 115/193 (59%), Positives = 154/193 (79%)
Query: 32 FSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPI 91
L+PMV+E S RGERAYDI+SRLLKER+I + GP+ND TA+++VAQLLFLESENP K +
Sbjct: 17 LGLVPMVVEQSGRGERAYDIYSRLLKERVIFLVGPVNDVTANLIVAQLLFLESENPDKDV 76
Query: 92 HMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTI 151
+ Y+NSPGG V++G+AIYDTMQ+I+ ++T+C+GQAASMGS LLA+G KG+R LPNS +
Sbjct: 77 YFYINSPGGSVSSGMAIYDTMQFIKPSVSTLCIGQAASMGSFLLAAGEKGKRFCLPNSRV 136
Query: 152 MIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEA 211
MIHQP GG+ GQA D+ IH ++I+ + LN + KHTGQ IE I+K+ DRD FM+ +A
Sbjct: 137 MIHQPLGGFQGQASDIEIHAREILGIRAKLNEMLAKHTGQPIEQIEKDTDRDRFMSAADA 196
Query: 212 KEFGIIDEVIDQR 224
E+GI+D+V+ R
Sbjct: 197 VEYGIVDKVLTNR 209
>gi|66044992|ref|YP_234833.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. syringae B728a]
gi|71733685|ref|YP_273935.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. phaseolicola 1448A]
gi|237803596|ref|ZP_04591181.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. oryzae str. 1_6]
gi|257483815|ref|ZP_05637856.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. tabaci str. ATCC 11528]
gi|289627504|ref|ZP_06460458.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. aesculi str. NCPPB 3681]
gi|289649945|ref|ZP_06481288.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. aesculi str. 2250]
gi|289679415|ref|ZP_06500305.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. syringae FF5]
gi|301384120|ref|ZP_07232538.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. tomato Max13]
gi|302059517|ref|ZP_07251058.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. tomato K40]
gi|302135032|ref|ZP_07261022.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. tomato NCPPB 1108]
gi|302187983|ref|ZP_07264656.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. syringae 642]
gi|410092110|ref|ZP_11288650.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
viridiflava UASWS0038]
gi|416015383|ref|ZP_11562996.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. glycinea str. B076]
gi|416028212|ref|ZP_11571268.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. glycinea str. race 4]
gi|422406896|ref|ZP_16483913.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. glycinea str. race 4]
gi|422583545|ref|ZP_16658668.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. aesculi str. 0893_23]
gi|422591339|ref|ZP_16665984.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. morsprunorum str. M302280]
gi|422595334|ref|ZP_16669622.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. lachrymans str. M301315]
gi|422606345|ref|ZP_16678355.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. mori str. 301020]
gi|422617411|ref|ZP_16686114.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. japonica str. M301072]
gi|422630346|ref|ZP_16695544.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. pisi str. 1704B]
gi|422640406|ref|ZP_16703833.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae Cit 7]
gi|422645838|ref|ZP_16708973.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. maculicola str. ES4326]
gi|422650231|ref|ZP_16713037.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. actinidiae str. M302091]
gi|422660628|ref|ZP_16723036.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. lachrymans str. M302278]
gi|422674865|ref|ZP_16734215.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. aceris str. M302273]
gi|422683344|ref|ZP_16741605.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. tabaci str. ATCC 11528]
gi|440721402|ref|ZP_20901801.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae BRIP34876]
gi|440724449|ref|ZP_20904731.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae BRIP34881]
gi|440746734|ref|ZP_20926014.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae BRIP39023]
gi|38257468|sp|Q87YR6.2|CLPP_PSESM RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|81308384|sp|Q4ZVM7.1|CLPP_PSEU2 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|110816461|sp|Q48KZ0.1|CLPP_PSE14 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|63255699|gb|AAY36795.1| ATP-dependent Clp protease proteolytic subunit ClpP [Pseudomonas
syringae pv. syringae B728a]
gi|71554238|gb|AAZ33449.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
syringae pv. phaseolicola 1448A]
gi|298159270|gb|EFI00328.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
savastanoi pv. savastanoi NCPPB 3335]
gi|320325361|gb|EFW81428.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. glycinea str. B076]
gi|320327654|gb|EFW83662.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. glycinea str. race 4]
gi|330868375|gb|EGH03084.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. aesculi str. 0893_23]
gi|330878772|gb|EGH12921.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. morsprunorum str. M302280]
gi|330882125|gb|EGH16274.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. glycinea str. race 4]
gi|330889997|gb|EGH22658.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. mori str. 301020]
gi|330897794|gb|EGH29213.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. japonica str. M301072]
gi|330939706|gb|EGH43001.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. pisi str. 1704B]
gi|330952797|gb|EGH53057.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae Cit 7]
gi|330959387|gb|EGH59647.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. maculicola str. ES4326]
gi|330963320|gb|EGH63580.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. actinidiae str. M302091]
gi|330972589|gb|EGH72655.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. aceris str. M302273]
gi|330985639|gb|EGH83742.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. lachrymans str. M301315]
gi|331012679|gb|EGH92735.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. tabaci str. ATCC 11528]
gi|331019229|gb|EGH99285.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. lachrymans str. M302278]
gi|331025578|gb|EGI05634.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. oryzae str. 1_6]
gi|409760538|gb|EKN45671.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
viridiflava UASWS0038]
gi|440363823|gb|ELQ00982.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae BRIP34876]
gi|440370093|gb|ELQ07039.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae BRIP34881]
gi|440370994|gb|ELQ07859.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae BRIP39023]
Length = 213
Score = 259 bits (662), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 115/193 (59%), Positives = 154/193 (79%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
L+PMVIE S+RGERAYDI+SRLLKER+I + GP+ D A+++ AQLLFLE+ENP K IH+
Sbjct: 19 LVPMVIEQSARGERAYDIYSRLLKERVIFMVGPVEDYMANLIAAQLLFLEAENPDKDIHL 78
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VTAG++IYDTMQ+I+ ++TIC+GQA SMG+ LLA G +G+R LPNS +MI
Sbjct: 79 YINSPGGSVTAGMSIYDTMQFIKPDVSTICIGQACSMGAFLLAGGAEGKRHCLPNSRMMI 138
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQP GG+ GQA D+ IH K+I+ + LN+L HTGQS+E I+++ +RD FM+ E A E
Sbjct: 139 HQPLGGFQGQASDIDIHAKEILHIRHRLNSLLAHHTGQSLETIERDTERDNFMSAERAAE 198
Query: 214 FGIIDEVIDQRPM 226
+G+ID VI++R M
Sbjct: 199 YGLIDSVINKRQM 211
>gi|407917161|gb|EKG10482.1| Peptidase S14 ClpP [Macrophomina phaseolina MS6]
Length = 242
Score = 259 bits (662), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 121/210 (57%), Positives = 158/210 (75%), Gaps = 2/210 (0%)
Query: 17 FLQLSKPSAQISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVV 76
F LS+ S + R ++ P V E G YDIFSRLLKERI+C+NG +N+ + +V
Sbjct: 25 FTGLSRESQLGAPRGWTPTPFVTETVGGGWHTYDIFSRLLKERIVCLNGEVNETVSASIV 84
Query: 77 AQLLFLESENPSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLA 136
AQLLFLE++NP KPI++Y+NSPGG VTAGLAIYDTM YIRSP+ TIC+GQAASMGSLLL
Sbjct: 85 AQLLFLEADNPEKPINLYINSPGGSVTAGLAIYDTMTYIRSPVTTICVGQAASMGSLLLC 144
Query: 137 SGTKGERRALPNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQ--SIE 194
G G R LP+S+IMIHQPSGGY GQA D+ IH K+I+R+ LN +Y +H + +++
Sbjct: 145 GGAAGHRSCLPHSSIMIHQPSGGYFGQASDIAIHAKEILRIRTQLNKIYQRHLTKPHTLD 204
Query: 195 VIQKNMDRDYFMTPEEAKEFGIIDEVIDQR 224
I+K M+RDYFM+ EEAKE G+ID+++D+R
Sbjct: 205 QIEKLMERDYFMSAEEAKEMGLIDKILDKR 234
>gi|389774765|ref|ZP_10192884.1| ATP-dependent Clp protease proteolytic subunit [Rhodanobacter
spathiphylli B39]
gi|388438364|gb|EIL95119.1| ATP-dependent Clp protease proteolytic subunit [Rhodanobacter
spathiphylli B39]
Length = 209
Score = 259 bits (662), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 115/197 (58%), Positives = 158/197 (80%)
Query: 28 SARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENP 87
+ ++ +L+PMV+E ++RGER+YDI+SRLLKER+I + G +ND A+++VAQ+LFLESENP
Sbjct: 5 TIQNLNLVPMVVEQTARGERSYDIYSRLLKERVIFLVGEVNDQVANLIVAQMLFLESENP 64
Query: 88 SKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALP 147
K I+ Y+NSPGG VTAGLAIYDTMQ+I+ ++T+C+GQA SMGS LL +G KG+R ALP
Sbjct: 65 DKDINFYINSPGGAVTAGLAIYDTMQFIKPNVSTMCIGQACSMGSFLLMAGAKGKRFALP 124
Query: 148 NSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMT 207
NS IMIHQPSGG GQA D+ I ++I+ + + LN LY +HTGQ +E I+ +M+RD FM
Sbjct: 125 NSRIMIHQPSGGAQGQATDIEIQAREILYIRERLNKLYVEHTGQPLEKIELDMERDRFMN 184
Query: 208 PEEAKEFGIIDEVIDQR 224
+AK +G+IDEV+D+R
Sbjct: 185 AVDAKAYGLIDEVLDKR 201
>gi|15892669|ref|NP_360383.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia conorii
str. Malish 7]
gi|15619841|gb|AAL03284.1| ATP-dependent clp protease proteolytic subunit [Rickettsia conorii
str. Malish 7]
Length = 216
Score = 259 bits (661), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 121/199 (60%), Positives = 157/199 (78%), Gaps = 1/199 (0%)
Query: 32 FSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPI 91
S +P+VIE +SRGERAYDI+SRLLKERII + + D A+++VAQLLFLE+ENP K I
Sbjct: 16 MSYVPIVIEPTSRGERAYDIYSRLLKERIIFVCSTVEDHMANLIVAQLLFLEAENPKKDI 75
Query: 92 HMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTI 151
+MY+NSPGG VTAGLAIYDTMQYI+ + T+C+GQA SMGSLLL G KG R +LP+S I
Sbjct: 76 YMYINSPGGVVTAGLAIYDTMQYIKPKVATLCIGQACSMGSLLLCGGEKGMRYSLPHSRI 135
Query: 152 MIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEA 211
MIHQPSGGY GQA D+ IH ++ +++ LN LY KHT Q ++ I+K+M+RD FM+PEEA
Sbjct: 136 MIHQPSGGYKGQATDIEIHAQETLKIKRLLNELYSKHTEQELKHIEKSMERDNFMSPEEA 195
Query: 212 KEFGIIDEVIDQR-PMALV 229
K+FG++D ++ R MAL+
Sbjct: 196 KKFGLVDNIMSSRDAMALL 214
>gi|409401838|ref|ZP_11251492.1| ATP-dependent endopeptidase Clp proteolytic subunit clpP
[Acidocella sp. MX-AZ02]
gi|409129475|gb|EKM99326.1| ATP-dependent endopeptidase Clp proteolytic subunit clpP
[Acidocella sp. MX-AZ02]
Length = 222
Score = 259 bits (661), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 112/189 (59%), Positives = 154/189 (81%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E ++RGER+YDI+SRLLKERI+ + G +ND + ++ AQ LFLESENP+K I
Sbjct: 13 NLVPMVVEQTARGERSYDIYSRLLKERIVFLTGQVNDVVSSLLCAQFLFLESENPNKEIS 72
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
Y+NSPGG V++GLAIYDTMQYIRSP++T+CLGQAASMGSLLL +G KG+R ALPN+ +M
Sbjct: 73 FYINSPGGVVSSGLAIYDTMQYIRSPVSTVCLGQAASMGSLLLCAGAKGKRFALPNARVM 132
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
+HQPSGG GQA D+ I ++I+++ LN +Y HTGQ +E I+ ++RD +M+ +EAK
Sbjct: 133 VHQPSGGAQGQATDIEIQAREILKLRSKLNQIYVDHTGQPLEAIEAKLERDTYMSADEAK 192
Query: 213 EFGIIDEVI 221
+FGI+DEV+
Sbjct: 193 DFGIVDEVV 201
>gi|395006778|ref|ZP_10390579.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Acidovorax
sp. CF316]
gi|394315232|gb|EJE52048.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Acidovorax
sp. CF316]
Length = 202
Score = 259 bits (661), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 116/201 (57%), Positives = 157/201 (78%)
Query: 25 AQISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLES 84
+ + ++ ++PMVIE S RGER+YDI+SRLLKERII + G +ND TA++VVAQLLFLES
Sbjct: 2 SSLDTQALGMVPMVIEQSGRGERSYDIYSRLLKERIIFLVGEVNDQTANLVVAQLLFLES 61
Query: 85 ENPSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERR 144
ENP K I Y+NSPGG VTAG+AIYDTMQ+I+ ++T+C+G AASMG+ LLA+G KG+R
Sbjct: 62 ENPDKDISFYINSPGGSVTAGMAIYDTMQFIKPDVSTMCVGFAASMGAFLLAAGAKGKRF 121
Query: 145 ALPNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDY 204
+LPNS IMIHQ GG GQA D+ IH + I+R D +N + + TGQ +E ++ + +RDY
Sbjct: 122 SLPNSKIMIHQVLGGARGQATDIEIHARDILRTKDQMNRILAERTGQPLEKVKNDTERDY 181
Query: 205 FMTPEEAKEFGIIDEVIDQRP 225
F+T +EAKE+G++D+VI QRP
Sbjct: 182 FLTADEAKEYGLVDQVIAQRP 202
>gi|188590743|ref|YP_001921998.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
botulinum E3 str. Alaska E43]
gi|251778109|ref|ZP_04821029.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
botulinum E1 str. 'BoNT E Beluga']
gi|226706443|sp|B2UX13.1|CLPP_CLOBA RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|188501024|gb|ACD54160.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
botulinum E3 str. Alaska E43]
gi|243082424|gb|EES48314.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
botulinum E1 str. 'BoNT E Beluga']
Length = 199
Score = 259 bits (661), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 112/190 (58%), Positives = 159/190 (83%)
Query: 32 FSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPI 91
SL+PMV+E +SRGER+YDIFSRLLKERII ++G +NDD+++++V+QLLFLESE+P K I
Sbjct: 1 MSLVPMVVEQTSRGERSYDIFSRLLKERIIMLSGEVNDDSSNLIVSQLLFLESEDPDKDI 60
Query: 92 HMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTI 151
+Y+NSPGG +TAG+AIYDTMQYI+ ++TIC+G AASMG+ LL+SG KG+R ALPN+ I
Sbjct: 61 SIYINSPGGSITAGMAIYDTMQYIKPDVSTICVGMAASMGAFLLSSGAKGKRYALPNAEI 120
Query: 152 MIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEA 211
MIHQP GG+ GQA D+ IH +I+++ ++LN + ++T Q +EVI+ +++RD FMT +EA
Sbjct: 121 MIHQPLGGFQGQATDIQIHANRILKIKESLNKILSENTNQPLEVIEADVERDNFMTADEA 180
Query: 212 KEFGIIDEVI 221
K +G++D+VI
Sbjct: 181 KAYGLVDKVI 190
>gi|313894919|ref|ZP_07828479.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Selenomonas sp. oral taxon 137 str. F0430]
gi|402301976|ref|ZP_10821097.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Selenomonas sp. FOBRC9]
gi|312976600|gb|EFR42055.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Selenomonas sp. oral taxon 137 str. F0430]
gi|400381261|gb|EJP34064.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Selenomonas sp. FOBRC9]
Length = 205
Score = 259 bits (661), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 124/213 (58%), Positives = 161/213 (75%), Gaps = 12/213 (5%)
Query: 35 IPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHMY 94
+PMV+E+SSRGERAYDI+SRLLKERII + GPI+D A+VVVAQ+LFLESE+P K IH+Y
Sbjct: 5 VPMVVENSSRGERAYDIYSRLLKERIIFLGGPIDDSVANVVVAQMLFLESEDPDKDIHLY 64
Query: 95 LNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMIH 154
+NSPGG VTAGLAIYDTMQYI+ ++TIC+GQAASMGS+LL +G KG+R ALP++ IMIH
Sbjct: 65 INSPGGVVTAGLAIYDTMQYIKPDVSTICIGQAASMGSILLTAGAKGKRYALPHARIMIH 124
Query: 155 QPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKEF 214
QP GG GQ+ D+ I K+I+R+ + N + +HTGQ + I + +RD FM+ EEAK +
Sbjct: 125 QPLGGAQGQSTDIQIQAKEILRLREVGNEILARHTGQDTDKINVDTERDNFMSAEEAKAY 184
Query: 215 GIIDEVIDQRPMALVTDAVGREGKEGKEGKEKG 247
G+IDEV+ + P A KE K+KG
Sbjct: 185 GLIDEVVVRPPAA------------SKESKDKG 205
>gi|158522703|ref|YP_001530573.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Desulfococcus
oleovorans Hxd3]
gi|259585950|sp|A8ZXB7.1|CLPP_DESOH RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|158511529|gb|ABW68496.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Desulfococcus
oleovorans Hxd3]
Length = 205
Score = 259 bits (661), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 118/191 (61%), Positives = 154/191 (80%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
LIPMVIE +SRGERA+DI+SRLLK+RI+ I I+D+TA++++AQLLFLESE+P K I+
Sbjct: 3 LIPMVIEQTSRGERAFDIYSRLLKDRIVFIGSAIDDETANLLIAQLLFLESEDPDKDINF 62
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG+V+AG+AIYDTMQYI+S I T+C+G AASMG+ LLA+G KG+R +LPNS IMI
Sbjct: 63 YINSPGGKVSAGMAIYDTMQYIKSDIATVCIGHAASMGAFLLAAGAKGKRFSLPNSRIMI 122
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQP GG GQA D+ I K+I+R+ D LN + HTG+ +E IQ + DRD+FM+ EEAK
Sbjct: 123 HQPMGGAQGQASDIAIQAKEILRMKDILNQILAHHTGKPLEQIQVDTDRDFFMSGEEAKA 182
Query: 214 FGIIDEVIDQR 224
+GI+D VI R
Sbjct: 183 YGIVDHVITDR 193
>gi|442771953|gb|AGC72625.1| ATP-dependent Clp protease proteolytic subunit [uncultured
bacterium A1Q1_fos_1134]
Length = 202
Score = 259 bits (661), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 117/199 (58%), Positives = 156/199 (78%)
Query: 27 ISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESEN 86
+ ++ +IPMVIE S RGER+YDI+SRLLKER+I + G +ND TA++VVAQLLFLESEN
Sbjct: 4 LETQALGMIPMVIEQSGRGERSYDIYSRLLKERVIFLVGEVNDQTANLVVAQLLFLESEN 63
Query: 87 PSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRAL 146
P K I Y+NSPGG VTAG+AIYDTMQ+I+ ++T+C G AASMG+ LLA+G KG+R +L
Sbjct: 64 PDKDISFYINSPGGSVTAGMAIYDTMQFIKPDVSTLCCGFAASMGAFLLAAGAKGKRFSL 123
Query: 147 PNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFM 206
PNS IMIHQ GG GQA D+ IH + I+R D +N + + TGQ IE ++++ +RDYFM
Sbjct: 124 PNSKIMIHQVLGGARGQATDIEIHARDILRTKDQMNRILAERTGQPIEKVKQDTERDYFM 183
Query: 207 TPEEAKEFGIIDEVIDQRP 225
T +EAK++GI+D+VI +RP
Sbjct: 184 TADEAKDYGIVDQVIAKRP 202
>gi|15643458|ref|NP_228504.1| ATP-dependent Clp protease proteolytic subunit [Thermotoga maritima
MSB8]
gi|148269380|ref|YP_001243840.1| ATP-dependent Clp protease proteolytic subunit [Thermotoga
petrophila RKU-1]
gi|170288038|ref|YP_001738276.1| ATP-dependent Clp protease proteolytic subunit [Thermotoga sp. RQ2]
gi|281411923|ref|YP_003346002.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermotoga
naphthophila RKU-10]
gi|418045135|ref|ZP_12683231.1| ATP-dependent Clp protease proteolytic subunit [Thermotoga maritima
MSB8]
gi|6685314|sp|Q9WZF9.1|CLPP_THEMA RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|166214719|sp|A5IJ91.1|CLPP_THEP1 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|226706553|sp|B1L812.1|CLPP_THESQ RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|4981218|gb|AAD35777.1|AE001741_10 ATP-dependent Clp protease, proteolytic subunit [Thermotoga
maritima MSB8]
gi|147734924|gb|ABQ46264.1| ATP-dependent Clp protease proteolytic subunit ClpP [Thermotoga
petrophila RKU-1]
gi|170175541|gb|ACB08593.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermotoga
sp. RQ2]
gi|281373026|gb|ADA66588.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermotoga
naphthophila RKU-10]
gi|351678217|gb|EHA61364.1| ATP-dependent Clp protease proteolytic subunit [Thermotoga maritima
MSB8]
Length = 203
Score = 259 bits (661), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 115/190 (60%), Positives = 156/190 (82%)
Query: 35 IPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHMY 94
+P+V+E + R ERAYDIFSRLLK+RI+ + PI+D A++V+AQLLFLE+E+P K +++Y
Sbjct: 13 VPIVVESTGRYERAYDIFSRLLKDRIVFLGSPIDDYVANLVIAQLLFLEAEDPDKDVYLY 72
Query: 95 LNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMIH 154
+NSPGG VTAGLAIYDTMQYI+ ++TIC+GQAASM ++LLA+G KG+R ALPN+ IMIH
Sbjct: 73 INSPGGSVTAGLAIYDTMQYIKCDVSTICVGQAASMAAVLLAAGAKGKRYALPNARIMIH 132
Query: 155 QPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKEF 214
QP GG G AKD+ I T++++R+ D LN + KHTGQ IE I+K+ DRD+FM+ EEAKE+
Sbjct: 133 QPLGGAEGPAKDVEIITRELLRIKDLLNRILSKHTGQPIEKIEKDTDRDFFMSAEEAKEY 192
Query: 215 GIIDEVIDQR 224
GI+D+V+ R
Sbjct: 193 GIVDKVVSTR 202
>gi|330808572|ref|YP_004353034.1| ATP-dependent Clp protease proteolytic subunit ClpP [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
gi|423696404|ref|ZP_17670894.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
fluorescens Q8r1-96]
gi|327376680|gb|AEA68030.1| endopeptidase Clp (ATP-dependent Clp protease proteolytic subunit
ClpP) [Pseudomonas brassicacearum subsp. brassicacearum
NFM421]
gi|388003857|gb|EIK65184.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
fluorescens Q8r1-96]
Length = 211
Score = 259 bits (661), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 113/192 (58%), Positives = 155/192 (80%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
L+PMVIE S+RGERAYDI+SRLLKER+I + GP+ D A+++ AQLLFLE+ENP K IH+
Sbjct: 19 LVPMVIEQSARGERAYDIYSRLLKERVIFLVGPVEDYMANLICAQLLFLEAENPDKDIHL 78
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VTAG++IYDTMQ+I+ ++T C+GQA SMG+ LL +G G+R LPNS +MI
Sbjct: 79 YINSPGGSVTAGMSIYDTMQFIKPNVSTTCIGQACSMGAFLLTAGAHGKRYCLPNSRVMI 138
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQP GG+ GQA D+ IH K+I+ + + LN L KH+G+++E I+++ +RD FM+ E A+E
Sbjct: 139 HQPLGGFQGQASDIEIHAKEILFIRERLNTLMAKHSGRTLEEIERDTNRDNFMSAEAARE 198
Query: 214 FGIIDEVIDQRP 225
+G+IDEVI+QRP
Sbjct: 199 YGLIDEVINQRP 210
>gi|429743956|ref|ZP_19277482.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Neisseria sp. oral taxon 020 str. F0370]
gi|429164090|gb|EKY06250.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Neisseria sp. oral taxon 020 str. F0370]
Length = 211
Score = 259 bits (661), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 116/194 (59%), Positives = 156/194 (80%), Gaps = 2/194 (1%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+LIP VIE S RGERA+DI+SRLLKERII + GP+NDDTA++VVAQ+LFLESENP K I
Sbjct: 9 TLIPTVIEQSGRGERAFDIYSRLLKERIIFLVGPVNDDTANLVVAQMLFLESENPDKDIF 68
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
+Y+NSPGG VTAG++++DTM +I+ ++T+CLGQAASMG+ LL++G KG+R ALPNS IM
Sbjct: 69 LYINSPGGSVTAGMSVFDTMNFIKPDVSTLCLGQAASMGAFLLSAGAKGKRFALPNSRIM 128
Query: 153 IHQP--SGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEE 210
IHQP SGG GQA D+ IH ++++++ LN KHTGQ +E I+++ DRD FM+ +
Sbjct: 129 IHQPLISGGLGGQASDIEIHARELIKIKQKLNEFLAKHTGQPLEKIERDTDRDNFMSADA 188
Query: 211 AKEFGIIDEVIDQR 224
A+E+G+ID+VI R
Sbjct: 189 AQEYGLIDQVIATR 202
>gi|427798011|gb|JAA64457.1| Putative atp-dependent clp protease proteolytic subunit, partial
[Rhipicephalus pulchellus]
Length = 263
Score = 259 bits (661), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 116/194 (59%), Positives = 152/194 (78%)
Query: 32 FSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPI 91
+ LIP+VIE + RGERAYDI+SRLLKERI+C+ GPI+D+ + +VVAQLLFL+SE+ KP+
Sbjct: 62 YPLIPIVIEQTGRGERAYDIYSRLLKERIVCVMGPISDEMSSLVVAQLLFLQSESNKKPV 121
Query: 92 HMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTI 151
HMY+NSPGG VTAGL IYDTMQYI PI T C+GQA S SLLL +GT G R++LPNS I
Sbjct: 122 HMYINSPGGSVTAGLGIYDTMQYIMPPIATWCIGQACSAASLLLCAGTPGMRQSLPNSRI 181
Query: 152 MIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEA 211
M+HQPSG +GQA D+ IH ++I+++ +N +Y KHT Q +E I+ M+RD FM+ +A
Sbjct: 182 MVHQPSGHAAGQATDIQIHAEEILKLKRVINGIYAKHTKQPLEAIESAMERDRFMSAAQA 241
Query: 212 KEFGIIDEVIDQRP 225
KEFG+ID V++ P
Sbjct: 242 KEFGLIDNVLEHPP 255
>gi|84515416|ref|ZP_01002778.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Loktanella
vestfoldensis SKA53]
gi|84510699|gb|EAQ07154.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Loktanella
vestfoldensis SKA53]
Length = 198
Score = 259 bits (661), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 116/193 (60%), Positives = 154/193 (79%)
Query: 32 FSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPI 91
+L+PMV+E ++RGERAYDIFSRLLKERII +NGP++D + +VVAQLL LESENP K I
Sbjct: 1 MNLVPMVVEQTARGERAYDIFSRLLKERIIFLNGPVHDGMSQLVVAQLLHLESENPKKEI 60
Query: 92 HMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTI 151
MY+NSPGG VT+GL+IYDTMQYI+ ++T+ +GQAASMGSLLL +G G R +LPNS +
Sbjct: 61 SMYINSPGGVVTSGLSIYDTMQYIKPKVSTLVIGQAASMGSLLLTAGHPGMRFSLPNSRV 120
Query: 152 MIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEA 211
M+HQPSGGY GQA D+ IH + ++ LN +Y KHTGQ ++ ++ ++RD FM+PEEA
Sbjct: 121 MVHQPSGGYQGQATDIMIHAAETQKLKTRLNEIYVKHTGQPLKKVETALERDNFMSPEEA 180
Query: 212 KEFGIIDEVIDQR 224
KE+G+IDE++ R
Sbjct: 181 KEWGLIDEIVVNR 193
>gi|421521992|ref|ZP_15968641.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas putida
LS46]
gi|402754253|gb|EJX14738.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas putida
LS46]
Length = 213
Score = 259 bits (661), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 115/194 (59%), Positives = 153/194 (78%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
L+PMVIE S+RGERAYDI+SRLLKER+I + GP+ D A++VVAQLLFLE+ENP K IH+
Sbjct: 19 LVPMVIEQSARGERAYDIYSRLLKERVIFLVGPVEDYMANLVVAQLLFLEAENPDKDIHL 78
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VTAG++IYDTMQ+I+ ++TIC+GQA SMG+ LLA+G KG+R LPNS +MI
Sbjct: 79 YINSPGGSVTAGMSIYDTMQFIKPDVSTICIGQACSMGAFLLAAGAKGKRHCLPNSRVMI 138
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQP GG+ GQA D+ IH ++I+ + LN L HTGQ +E I+++ +RD FM+ A E
Sbjct: 139 HQPLGGFQGQATDIEIHAQEILNIKARLNELLAYHTGQELETIKRDTERDNFMSASRAAE 198
Query: 214 FGIIDEVIDQRPMA 227
+G+ID V D+R +A
Sbjct: 199 YGLIDSVYDKRQLA 212
>gi|157964626|ref|YP_001499450.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia
massiliae MTU5]
gi|157844402|gb|ABV84903.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia
massiliae MTU5]
Length = 216
Score = 259 bits (661), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 118/192 (61%), Positives = 154/192 (80%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
S +P+VIE +SRGERAYDI+SRLLKERII + + D A+++VAQLLFLE+ENP K I+
Sbjct: 17 SYVPIVIEPTSRGERAYDIYSRLLKERIIFVCSTVEDHMANLIVAQLLFLEAENPKKDIY 76
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
+Y+NSPGG VTAGLAIYDTMQYI+ + T+C+GQA SMGSLLL G +G R +LP+S IM
Sbjct: 77 IYINSPGGVVTAGLAIYDTMQYIKPKVATLCIGQACSMGSLLLCGGEQGMRYSLPHSRIM 136
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQPSGGY GQA D+ IH ++ +++ LN LY KHTGQ ++ I+K+M+RD FM+PEEAK
Sbjct: 137 IHQPSGGYKGQATDIEIHAQETLKIKRLLNELYSKHTGQELKHIEKSMERDNFMSPEEAK 196
Query: 213 EFGIIDEVIDQR 224
+FG++D +I R
Sbjct: 197 KFGLVDNIISSR 208
>gi|383484037|ref|YP_005392950.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia parkeri
str. Portsmouth]
gi|378936391|gb|AFC74891.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia parkeri
str. Portsmouth]
Length = 201
Score = 259 bits (661), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 121/199 (60%), Positives = 157/199 (78%), Gaps = 1/199 (0%)
Query: 32 FSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPI 91
S +P+VIE +SRGERAYDI+SRLLKERII + + D A+++VAQLLFLE+ENP K I
Sbjct: 1 MSYVPIVIEPTSRGERAYDIYSRLLKERIIFVCSTVEDHMANLIVAQLLFLEAENPKKDI 60
Query: 92 HMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTI 151
+MY+NSPGG VTAGLAIYDTMQYI+ + T+C+GQA SMGSLLL G KG R +LP+S I
Sbjct: 61 YMYINSPGGVVTAGLAIYDTMQYIKPKVATLCIGQACSMGSLLLCGGEKGMRYSLPHSRI 120
Query: 152 MIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEA 211
MIHQPSGGY GQA D+ IH ++ +++ LN LY KHT Q ++ I+K+M+RD FM+PEEA
Sbjct: 121 MIHQPSGGYKGQATDIEIHAQETLKIKRLLNELYSKHTEQELKHIEKSMERDNFMSPEEA 180
Query: 212 KEFGIIDEVIDQR-PMALV 229
K+FG++D ++ R MAL+
Sbjct: 181 KKFGLVDNILSSRDAMALL 199
>gi|26989024|ref|NP_744449.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas putida
KT2440]
gi|148548677|ref|YP_001268779.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas putida
F1]
gi|339486803|ref|YP_004701331.1| ATP-dependent Clp protease, proteolytic subunit [Pseudomonas putida
S16]
gi|395444305|ref|YP_006384558.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas putida
ND6]
gi|421530071|ref|ZP_15976578.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas putida
S11]
gi|431801808|ref|YP_007228711.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas putida
HB3267]
gi|38257487|sp|Q88KJ0.1|CLPP_PSEPK RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|166214701|sp|A5W635.1|CLPP_PSEP1 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|24983847|gb|AAN67913.1|AE016423_8 ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
putida KT2440]
gi|148512735|gb|ABQ79595.1| ATP-dependent Clp protease proteolytic subunit ClpP [Pseudomonas
putida F1]
gi|171362771|dbj|BAG15849.1| probable ATP-dependent clp protease [Pseudomonas putida]
gi|338837646|gb|AEJ12451.1| ATP-dependent Clp protease, proteolytic subunit [Pseudomonas putida
S16]
gi|388558302|gb|AFK67443.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas putida
ND6]
gi|402212478|gb|EJT83868.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas putida
S11]
gi|430792573|gb|AGA72768.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas putida
HB3267]
Length = 213
Score = 259 bits (661), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 115/194 (59%), Positives = 153/194 (78%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
L+PMVIE S+RGERAYDI+SRLLKER+I + GP+ D A++VVAQLLFLE+ENP K IH+
Sbjct: 19 LVPMVIEQSARGERAYDIYSRLLKERVIFLVGPVEDYMANLVVAQLLFLEAENPDKDIHL 78
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VTAG++IYDTMQ+I+ ++TIC+GQA SMG+ LLA+G KG+R LPNS +MI
Sbjct: 79 YINSPGGSVTAGMSIYDTMQFIKPDVSTICIGQACSMGAFLLAAGAKGKRHCLPNSRVMI 138
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQP GG+ GQA D+ IH ++I+ + LN L HTGQ +E I+++ +RD FM+ A E
Sbjct: 139 HQPLGGFQGQATDIEIHAQEILNIKARLNELLAYHTGQDLETIKRDTERDNFMSASRAAE 198
Query: 214 FGIIDEVIDQRPMA 227
+G+ID V D+R +A
Sbjct: 199 YGLIDSVYDKRQLA 212
>gi|167627759|ref|YP_001678259.1| ATP-dependent Clp protease proteolytic subunit [Francisella
philomiragia subsp. philomiragia ATCC 25017]
gi|254876856|ref|ZP_05249566.1| ATP-dependent Clp protease subunit P [Francisella philomiragia
subsp. philomiragia ATCC 25015]
gi|189082458|sp|B0TZA5.1|CLPP_FRAP2 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|167597760|gb|ABZ87758.1| Endopeptidase Clp [Francisella philomiragia subsp. philomiragia
ATCC 25017]
gi|254842877|gb|EET21291.1| ATP-dependent Clp protease subunit P [Francisella philomiragia
subsp. philomiragia ATCC 25015]
Length = 201
Score = 259 bits (661), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 116/192 (60%), Positives = 153/192 (79%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+P VIE ++ GERA+DI+SRLLKERI+ +NG +ND +A++V+AQLLFLESE+P K I+
Sbjct: 5 NLVPTVIEKTAGGERAFDIYSRLLKERIVFLNGEVNDHSANLVIAQLLFLESEDPDKDIY 64
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
Y+NSPGG VTAG+ +YDTMQ+I+ +NTIC+G AASMGSLLLA G KG+R +LP+S IM
Sbjct: 65 FYINSPGGMVTAGMGVYDTMQFIKPDVNTICIGLAASMGSLLLAGGAKGKRYSLPSSQIM 124
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQP GG+ GQA D+ IH K I+R+ D LN + HTGQ +E I ++ DRD FM +EAK
Sbjct: 125 IHQPLGGFRGQASDIEIHAKNILRIKDRLNKVLAHHTGQDLETIVRDTDRDNFMMADEAK 184
Query: 213 EFGIIDEVIDQR 224
E+G+ID VI+ R
Sbjct: 185 EYGLIDHVIESR 196
>gi|344923830|ref|ZP_08777291.1| protease subunit of ATP-dependent Clp protease [Candidatus
Odyssella thessalonicensis L13]
Length = 214
Score = 259 bits (661), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 114/200 (57%), Positives = 160/200 (80%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+P+V+E ++RGER+YDI+SRLLKERII + G + D+ A ++ AQ+LFLESENP+K I
Sbjct: 11 NLVPIVVEQTNRGERSYDIYSRLLKERIIFVTGQVYDEMASLICAQILFLESENPNKDIV 70
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
+Y+NSPGG VTAGL+IYDTM+Y++ I T+C+GQA SMGSLLL +GTKG+R +LPN+ +M
Sbjct: 71 LYINSPGGVVTAGLSIYDTMRYVKCDITTLCMGQACSMGSLLLTAGTKGKRYSLPNARVM 130
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQPSGG GQA D+ IH ++I+++ LN +Y HTG+S+E I++ M+RD FM+ EEA
Sbjct: 131 IHQPSGGAQGQATDIEIHAREILKMRQRLNQMYVHHTGKSLEEIERAMERDNFMSAEEAL 190
Query: 213 EFGIIDEVIDQRPMALVTDA 232
FG+ID V+ +RP +L +A
Sbjct: 191 AFGLIDHVVTERPKSLTLEA 210
>gi|418939670|ref|ZP_13493060.1| ATP-dependent Clp protease proteolytic subunit [Rhizobium sp.
PDO1-076]
gi|375053611|gb|EHS50000.1| ATP-dependent Clp protease proteolytic subunit [Rhizobium sp.
PDO1-076]
Length = 211
Score = 259 bits (661), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 113/194 (58%), Positives = 155/194 (79%)
Query: 31 SFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKP 90
+ +L+PMV+E ++RGER+YDIFSRLLKERII + GP+ D+ A +V AQLLFLE+ENP K
Sbjct: 8 ALALVPMVVEQTNRGERSYDIFSRLLKERIIFLTGPVEDNMASLVCAQLLFLEAENPKKE 67
Query: 91 IHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNST 150
I +Y+NSPGG VTAG+AIYDTMQ+IR ++T+C+GQAASMGSLLLA+G KG R A PN+
Sbjct: 68 IAIYINSPGGVVTAGMAIYDTMQFIRPAVSTLCVGQAASMGSLLLAAGEKGMRFATPNAR 127
Query: 151 IMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEE 210
IM+HQPSGG+ GQA D+ H + I+++ LN +Y KHTG+++E ++ +DRD+FM E
Sbjct: 128 IMVHQPSGGFQGQASDIERHARDIIKMKRRLNEVYVKHTGRTLEEVENTLDRDHFMEASE 187
Query: 211 AKEFGIIDEVIDQR 224
A+E+G+ID ++ R
Sbjct: 188 AQEWGLIDRILTSR 201
>gi|34581620|ref|ZP_00143100.1| ATP-dependent clp protease proteolytic subunit [Rickettsia sibirica
246]
gi|341583923|ref|YP_004764414.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia
heilongjiangensis 054]
gi|350273581|ref|YP_004884894.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia japonica
YH]
gi|374319373|ref|YP_005065872.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia slovaca
13-B]
gi|383751354|ref|YP_005426455.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia slovaca
str. D-CWPP]
gi|20137864|sp|Q92HM5.2|CLPP_RICCN RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|28263005|gb|EAA26509.1| ATP-dependent clp protease proteolytic subunit [Rickettsia sibirica
246]
gi|340808149|gb|AEK74737.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia
heilongjiangensis 054]
gi|348592794|dbj|BAK96755.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia japonica
YH]
gi|360041922|gb|AEV92304.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia slovaca
13-B]
gi|379774368|gb|AFD19724.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia slovaca
str. D-CWPP]
Length = 201
Score = 259 bits (661), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 121/199 (60%), Positives = 157/199 (78%), Gaps = 1/199 (0%)
Query: 32 FSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPI 91
S +P+VIE +SRGERAYDI+SRLLKERII + + D A+++VAQLLFLE+ENP K I
Sbjct: 1 MSYVPIVIEPTSRGERAYDIYSRLLKERIIFVCSTVEDHMANLIVAQLLFLEAENPKKDI 60
Query: 92 HMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTI 151
+MY+NSPGG VTAGLAIYDTMQYI+ + T+C+GQA SMGSLLL G KG R +LP+S I
Sbjct: 61 YMYINSPGGVVTAGLAIYDTMQYIKPKVATLCIGQACSMGSLLLCGGEKGMRYSLPHSRI 120
Query: 152 MIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEA 211
MIHQPSGGY GQA D+ IH ++ +++ LN LY KHT Q ++ I+K+M+RD FM+PEEA
Sbjct: 121 MIHQPSGGYKGQATDIEIHAQETLKIKRLLNELYSKHTEQELKHIEKSMERDNFMSPEEA 180
Query: 212 KEFGIIDEVIDQR-PMALV 229
K+FG++D ++ R MAL+
Sbjct: 181 KKFGLVDNIMSSRDAMALL 199
>gi|381199610|ref|ZP_09906757.1| ATP-dependent Clp protease proteolytic subunit [Sphingobium
yanoikuyae XLDN2-5]
Length = 207
Score = 259 bits (661), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 117/195 (60%), Positives = 154/195 (78%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+P+VIE S+RGER++DI+SRLL+ERII + G + D A ++VAQLLFLESENP K I
Sbjct: 7 ALVPIVIEQSNRGERSFDIYSRLLRERIIFVTGQVEDHMASLIVAQLLFLESENPKKDIW 66
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
MY+NSPGG VTAG+AI+DTM+YIR + T+C+GQAASMGS LLA+G G+R AL N+ IM
Sbjct: 67 MYINSPGGVVTAGMAIHDTMKYIRPQVGTVCIGQAASMGSFLLAAGEPGKRIALSNARIM 126
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
+HQPSGG G A D+ I K+I+R+ LN LY K+TGQS+E +++ MDRD F+ +EAK
Sbjct: 127 VHQPSGGAQGMASDIEIQAKEILRIRRRLNDLYVKYTGQSLEAVERAMDRDTFLEADEAK 186
Query: 213 EFGIIDEVIDQRPMA 227
FG++DEV D+RP A
Sbjct: 187 AFGLVDEVFDRRPAA 201
>gi|427405940|ref|ZP_18896145.1| ATP-dependent Clp protease proteolytic subunit [Selenomonas sp.
F0473]
gi|425708781|gb|EKU71820.1| ATP-dependent Clp protease proteolytic subunit [Selenomonas sp.
F0473]
Length = 206
Score = 259 bits (661), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 124/213 (58%), Positives = 161/213 (75%), Gaps = 11/213 (5%)
Query: 35 IPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHMY 94
+PMV+E+SSRGERAYDI+SRLLKERII + GPI+D+ A+VV+AQ+LFLESE+P K IH+Y
Sbjct: 5 VPMVVENSSRGERAYDIYSRLLKERIIFLGGPIDDNVANVVIAQMLFLESEDPDKDIHLY 64
Query: 95 LNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMIH 154
+NSPGG VTAGLA+YDTMQYI+ ++TIC+GQAASM S+LLA+G G+R ALP + IMIH
Sbjct: 65 INSPGGVVTAGLAMYDTMQYIKPDVSTICIGQAASMASILLAAGAPGKRYALPQARIMIH 124
Query: 155 QPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKEF 214
QPSGG GQ+ D+ I K+I+R+ + N + KHTGQ E I + +RD FM+ E+AK +
Sbjct: 125 QPSGGAQGQSTDIQIQAKEILRLRETANEILAKHTGQKPEAINVDTERDNFMSAEDAKAY 184
Query: 215 GIIDEVIDQRPMALVTDAVGREGKEGKEGKEKG 247
G+IDEV+ RP A + KE K KG
Sbjct: 185 GLIDEVV-VRPKAAAS----------KESKNKG 206
>gi|77459919|ref|YP_349426.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
fluorescens Pf0-1]
gi|398849723|ref|ZP_10606452.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
sp. GM80]
gi|398966271|ref|ZP_10681430.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
sp. GM30]
gi|398974167|ref|ZP_10684904.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
sp. GM25]
gi|92087005|sp|Q3K9W9.1|CLPP_PSEPF RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|77383922|gb|ABA75435.1| ATP-dependent Clp protease proteolytic subunit ClpP [Pseudomonas
fluorescens Pf0-1]
gi|398142051|gb|EJM30956.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
sp. GM25]
gi|398146239|gb|EJM34995.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
sp. GM30]
gi|398250438|gb|EJN35758.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
sp. GM80]
Length = 211
Score = 259 bits (661), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 113/192 (58%), Positives = 155/192 (80%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
L+PMV+E S+RGERAYDI+SRLLKER+I + GP+ D A+++ AQLLFLE+ENP K IH+
Sbjct: 19 LVPMVVEQSARGERAYDIYSRLLKERVIFLVGPVEDYMANLICAQLLFLEAENPDKDIHL 78
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VTAG++IYDTMQ+I+ ++T C+GQA SMG+ LL +G G+R LPNS +MI
Sbjct: 79 YINSPGGSVTAGMSIYDTMQFIKPNVSTTCIGQACSMGAFLLTAGAPGKRFCLPNSRVMI 138
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQP GG+ GQA D+ IH K+I+ + + LN L KH+G+++E I+++ +RD FM+ E AKE
Sbjct: 139 HQPLGGFQGQASDIEIHAKEILFIRERLNTLMAKHSGRTLEEIERDTNRDNFMSAEAAKE 198
Query: 214 FGIIDEVIDQRP 225
+G+IDEVI+QRP
Sbjct: 199 YGLIDEVINQRP 210
>gi|119384010|ref|YP_915066.1| ATP-dependent Clp protease proteolytic subunit [Paracoccus
denitrificans PD1222]
gi|119373777|gb|ABL69370.1| ATP-dependent Clp protease proteolytic subunit ClpP [Paracoccus
denitrificans PD1222]
Length = 209
Score = 259 bits (661), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 114/192 (59%), Positives = 159/192 (82%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E +SRGERAYDIFSRLLKERII ++GP++D A ++ AQLLFLE+ENP+K I
Sbjct: 11 TLVPMVVEQTSRGERAYDIFSRLLKERIIFLSGPVHDGMATLISAQLLFLEAENPTKDIS 70
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
MY+NSPGG VT+GL+IYDTMQYI+ ++T+ +GQAASMGSLLL +G G+R +LPNS +M
Sbjct: 71 MYINSPGGVVTSGLSIYDTMQYIKPRVSTLVVGQAASMGSLLLCAGQPGQRFSLPNSRVM 130
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
+HQPSGG+ GQA D+ IH ++ ++ LN +Y KHTG+++E +++ ++RD FM+PEEAK
Sbjct: 131 VHQPSGGFQGQATDILIHARETEKLKRRLNEIYVKHTGRTLEEVEQALERDRFMSPEEAK 190
Query: 213 EFGIIDEVIDQR 224
E+G+IDE++ R
Sbjct: 191 EWGLIDEILVAR 202
>gi|427407872|ref|ZP_18898074.1| ATP-dependent Clp protease proteolytic subunit [Sphingobium
yanoikuyae ATCC 51230]
gi|425713835|gb|EKU76847.1| ATP-dependent Clp protease proteolytic subunit [Sphingobium
yanoikuyae ATCC 51230]
Length = 211
Score = 259 bits (661), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 117/195 (60%), Positives = 154/195 (78%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+P+VIE S+RGER++DI+SRLL+ERII + G + D A ++VAQLLFLESENP K I
Sbjct: 11 ALVPIVIEQSNRGERSFDIYSRLLRERIIFVTGQVEDHMASLIVAQLLFLESENPKKDIW 70
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
MY+NSPGG VTAG+AI+DTM+YIR + T+C+GQAASMGS LLA+G G+R AL N+ IM
Sbjct: 71 MYINSPGGVVTAGMAIHDTMKYIRPQVGTVCIGQAASMGSFLLAAGEPGKRIALSNARIM 130
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
+HQPSGG G A D+ I K+I+R+ LN LY K+TGQS+E +++ MDRD F+ +EAK
Sbjct: 131 VHQPSGGAQGMASDIEIQAKEILRIRRRLNDLYVKYTGQSLEAVERAMDRDTFLEADEAK 190
Query: 213 EFGIIDEVIDQRPMA 227
FG++DEV D+RP A
Sbjct: 191 AFGLVDEVFDRRPAA 205
>gi|334339586|ref|YP_004544566.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Desulfotomaculum ruminis DSM 2154]
gi|334090940|gb|AEG59280.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfotomaculum ruminis DSM 2154]
Length = 195
Score = 259 bits (661), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 118/191 (61%), Positives = 154/191 (80%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
L+P+V+E ++RGERAYDI+SRLLK+RII I GPI D A++V+AQ LFLE+E+P K IH+
Sbjct: 4 LVPIVVEQTNRGERAYDIYSRLLKDRIIFIGGPIEDHIANLVIAQFLFLEAEDPEKDIHL 63
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VTAG+AIYDTMQYI+ P++TICLGQAASMGS LLA+GTKG+R +LP + IMI
Sbjct: 64 YINSPGGVVTAGMAIYDTMQYIKCPVSTICLGQAASMGSFLLAAGTKGKRYSLPYARIMI 123
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQ GG GQA D+ IH K+I+R+ + LN HTGQ ++ I ++ +RD+FM+ E AKE
Sbjct: 124 HQVLGGVQGQATDIDIHAKEILRIKEVLNERLSHHTGQPLDKIARDTERDFFMSAEAAKE 183
Query: 214 FGIIDEVIDQR 224
+GIIDEV+ R
Sbjct: 184 YGIIDEVMPYR 194
>gi|296284617|ref|ZP_06862615.1| ATP-dependent Clp protease proteolytic subunit [Citromicrobium
bathyomarinum JL354]
Length = 228
Score = 259 bits (661), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 116/193 (60%), Positives = 154/193 (79%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+P+V+E +SRGER++DIFSRLL+ERI+ + GP+ D A + VAQLLFLESENPSKPI
Sbjct: 16 ALVPVVVEQTSRGERSFDIFSRLLRERIVFLTGPVEDGMASLAVAQLLFLESENPSKPIS 75
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
MY+NSPGG VTAG+AI+DTMQYI+ I+T+C+GQAASMGS LLA+G G R ALPN+ IM
Sbjct: 76 MYINSPGGVVTAGMAIHDTMQYIQPRISTVCVGQAASMGSFLLAAGEPGMRIALPNARIM 135
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQPSGG G A D+ I ++I+R+ +N LY K+TGQ +E I++ MDRD F+ +EA
Sbjct: 136 IHQPSGGAQGMASDIEIQAREILRIRKNMNELYAKYTGQPLEKIEEAMDRDTFLDAQEAM 195
Query: 213 EFGIIDEVIDQRP 225
+FG++D+V + RP
Sbjct: 196 KFGLVDKVFESRP 208
>gi|408373741|ref|ZP_11171435.1| ATP-dependent Clp protease, proteolytic subunitclpp [Alcanivorax
hongdengensis A-11-3]
gi|407766445|gb|EKF74888.1| ATP-dependent Clp protease, proteolytic subunitclpp [Alcanivorax
hongdengensis A-11-3]
Length = 218
Score = 259 bits (661), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 118/226 (52%), Positives = 169/226 (74%), Gaps = 8/226 (3%)
Query: 1 MQSMRNLLSRTSMATKFLQLSKPSAQISARSFSLIPMVIEHSSRGERAYDIFSRLLKERI 60
M + N+ S T TK +Q P+ + L+P+VIE +SRGER++DI+SRLLKER+
Sbjct: 1 MIDLSNITSLTPEMTKLIQ--DPT------NLGLVPVVIEQTSRGERSFDIYSRLLKERV 52
Query: 61 ICINGPINDDTAHVVVAQLLFLESENPSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPIN 120
I + G + D A+++VAQ+LFLESENP K IH+Y+NSPGG VTAG+++YDTMQ+++ ++
Sbjct: 53 IFMIGQVEDHMANLIVAQMLFLESENPDKDIHLYINSPGGSVTAGMSVYDTMQFVKPDVS 112
Query: 121 TICLGQAASMGSLLLASGTKGERRALPNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDA 180
T+C+GQAASMG+ LLA+G G+R ALPN+ +MIHQP GG+ GQA D+ IH K+I+++
Sbjct: 113 TMCVGQAASMGAFLLAAGAHGKRFALPNARVMIHQPLGGFQGQASDIEIHAKEILKIKGQ 172
Query: 181 LNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKEFGIIDEVIDQRPM 226
LN L HTGQ +E ++K+ DRD FM EEAKE+G++D V+ +RP+
Sbjct: 173 LNNLLAHHTGQPLERLEKDTDRDNFMGAEEAKEYGLVDAVLSRRPV 218
>gi|71729193|gb|EAO31314.1| Peptidase S14, ClpP [Xylella fastidiosa Ann-1]
Length = 208
Score = 259 bits (661), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 117/200 (58%), Positives = 159/200 (79%)
Query: 30 RSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSK 89
++ +L+PMV+E +SRGERAYDI+SRLLKER+I + GPI+D A++VVAQLLFLE+ENP K
Sbjct: 6 KALNLVPMVVEQTSRGERAYDIYSRLLKERLIFLVGPIDDYMANLVVAQLLFLEAENPEK 65
Query: 90 PIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNS 149
I++Y+NSPGG VTAG+AIYDTMQYI+ ++TIC+GQAASMG+LLLASG G+R ALPNS
Sbjct: 66 DINIYINSPGGVVTAGMAIYDTMQYIKPAVSTICVGQAASMGALLLASGASGKRYALPNS 125
Query: 150 TIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPE 209
+MIHQP GG+ GQA D+ IH ++I+ + LN + KHTGQS+E I + +RD F +
Sbjct: 126 RVMIHQPLGGFQGQATDIDIHAREILALRARLNEILAKHTGQSLETIAHDTERDNFKSAV 185
Query: 210 EAKEFGIIDEVIDQRPMALV 229
+A+ +G++D+V QR L+
Sbjct: 186 DAQAYGLVDQVFGQRQEELI 205
>gi|402773762|ref|YP_006593299.1| ATP-dependent Clp protease proteolytic subunit [Methylocystis sp.
SC2]
gi|401775782|emb|CCJ08648.1| ATP-dependent Clp protease proteolytic subunit [Methylocystis sp.
SC2]
Length = 211
Score = 258 bits (660), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 115/192 (59%), Positives = 154/192 (80%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
LIP VIE++SRGER +DI+SRLL+ERII + GPI D A V++AQLLFLESENP K I +
Sbjct: 12 LIPQVIENTSRGERGFDIYSRLLRERIIFVTGPIEDHMASVIIAQLLFLESENPKKEISL 71
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VT+GLAIYDT+Q+I+ ++T+C+GQAASMGSLLLA+G G R ALPN+ +M+
Sbjct: 72 YINSPGGVVTSGLAIYDTIQFIKPKVSTLCVGQAASMGSLLLAAGADGLRYALPNARVML 131
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQPSGG+ GQA D+ H + I++V LN +Y +HTG+ E I++ +DRD+FM+ EEA+
Sbjct: 132 HQPSGGFQGQASDIQRHAEDILKVKKRLNDIYVRHTGKDYETIERTLDRDHFMSAEEARH 191
Query: 214 FGIIDEVIDQRP 225
FGI+D V ++RP
Sbjct: 192 FGIVDAVQERRP 203
>gi|422292888|gb|EKU20189.1| ATP-dependent Clp protease, protease subunit [Nannochloropsis
gaditana CCMP526]
Length = 202
Score = 258 bits (660), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 113/192 (58%), Positives = 157/192 (81%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E +SRGERAYDIFSRLLKERII ++GP++D + ++VAQLL LE+ENP K I
Sbjct: 3 TLVPMVVEQTSRGERAYDIFSRLLKERIIFVSGPVHDGMSSLIVAQLLHLEAENPKKEIS 62
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
MY+NSPGG VT+GL+IYDTMQYI+ ++T+ +GQAASMGSLLL +G KG R +LPNS IM
Sbjct: 63 MYINSPGGVVTSGLSIYDTMQYIKPKVSTLVIGQAASMGSLLLTAGEKGMRFSLPNSRIM 122
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
+HQPSGG+ GQA D+ IH ++ +++ LN +Y HTGQ++E ++ ++RD FM+P++AK
Sbjct: 123 VHQPSGGFQGQATDIMIHAEETLKLKRRLNEIYVTHTGQTLENVEAALERDRFMSPDDAK 182
Query: 213 EFGIIDEVIDQR 224
E+G+IDE++ R
Sbjct: 183 EWGLIDEIVSNR 194
>gi|406999542|gb|EKE17145.1| hypothetical protein ACD_10C00602G0002 [uncultured bacterium]
Length = 209
Score = 258 bits (660), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 114/198 (57%), Positives = 159/198 (80%)
Query: 30 RSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSK 89
++ ++PMVIE S RGERA+DI+SRLLKER+I + GP+ND TA++VVAQLLFLE++NP K
Sbjct: 12 QALGMVPMVIEQSGRGERAFDIYSRLLKERVIFLVGPVNDITANLVVAQLLFLEADNPDK 71
Query: 90 PIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNS 149
I+ Y+NSPGG VTAG++IYDTMQ+I+ ++T+C+GQAASMG+ LL +G KG+R ALPNS
Sbjct: 72 DIYFYINSPGGSVTAGMSIYDTMQFIKPDVSTLCIGQAASMGAFLLNAGAKGKRFALPNS 131
Query: 150 TIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPE 209
+MIHQP GG+ GQA D+ IH K+I+ + D LN + +H+GQ +E I+K+ DRD F++
Sbjct: 132 RVMIHQPLGGFQGQASDIAIHAKEILSIRDRLNRIMAEHSGQPLERIEKDTDRDNFLSSA 191
Query: 210 EAKEFGIIDEVIDQRPMA 227
EA E+G+ID+V+ +R A
Sbjct: 192 EAAEYGLIDKVLTRRDAA 209
>gi|328543681|ref|YP_004303790.1| ATP-dependent Clp protease proteolytic subunit [Polymorphum gilvum
SL003B-26A1]
gi|326413425|gb|ADZ70488.1| ATP-dependent Clp protease proteolytic subunit [Polymorphum gilvum
SL003B-26A1]
Length = 211
Score = 258 bits (660), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 117/206 (56%), Positives = 163/206 (79%), Gaps = 6/206 (2%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E ++RGERA+DI+SRLLKERII + GPI D A +V AQLL+LE+ENP+K I
Sbjct: 11 TLVPMVVEQTNRGERAFDIYSRLLKERIIFLTGPIEDQLATLVCAQLLYLEAENPNKEIA 70
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
+Y+NSPGG VT+GLAIYDTMQ+IR ++T+C+GQAASMGSLLLA+G KG R +LPN+ +M
Sbjct: 71 LYINSPGGLVTSGLAIYDTMQFIRPEVSTLCIGQAASMGSLLLAAGQKGMRFSLPNARVM 130
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
+HQPSGG+ GQA D+ +H ++I+++ LN +Y KHTGQS++ +++ ++RD FMT + AK
Sbjct: 131 VHQPSGGFRGQAADIMLHAQEILKLKRRLNDIYVKHTGQSLDSVEEALERDNFMTADMAK 190
Query: 213 EFGIIDEVIDQRPMALVTDAVGREGK 238
FGI+D VI R ++G EG+
Sbjct: 191 GFGIVDSVISDRA------SLGTEGQ 210
>gi|375084538|ref|ZP_09731403.1| ATP-dependent Clp protease proteolytic subunit [Megamonas
funiformis YIT 11815]
gi|374568042|gb|EHR39235.1| ATP-dependent Clp protease proteolytic subunit [Megamonas
funiformis YIT 11815]
Length = 198
Score = 258 bits (660), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 117/190 (61%), Positives = 156/190 (82%)
Query: 32 FSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPI 91
+ +PMV+E S RGERAYDI+SRLLK+RII + GPI+D+ A+VV+AQLLFLESE+P K I
Sbjct: 1 MNYVPMVVEQSGRGERAYDIYSRLLKDRIIFLGGPIDDNVANVVIAQLLFLESEDPDKDI 60
Query: 92 HMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTI 151
H+Y+NSPGG VTAGLAIYDTMQYI+ ++TIC+GQAASMGS+LLA+G KG+R ALP S I
Sbjct: 61 HLYINSPGGVVTAGLAIYDTMQYIKPDVSTICIGQAASMGSVLLAAGAKGKRYALPYSRI 120
Query: 152 MIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEA 211
MIHQP GG GQ+ D+ I ++I+R+ + LN + +HTGQS++ + ++ +RD FM+ EA
Sbjct: 121 MIHQPLGGAQGQSTDIQIQAREILRIRETLNEILSRHTGQSVKKLTEDTERDNFMSALEA 180
Query: 212 KEFGIIDEVI 221
K++G+IDEVI
Sbjct: 181 KKYGLIDEVI 190
>gi|387127882|ref|YP_006296487.1| ATP-dependent Clp protease proteolytic subunit [Methylophaga sp.
JAM1]
gi|386274944|gb|AFI84842.1| ATP-dependent Clp protease proteolytic subunit [Methylophaga sp.
JAM1]
Length = 211
Score = 258 bits (660), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 116/202 (57%), Positives = 157/202 (77%)
Query: 24 SAQISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLE 83
S Q++ +L+P+V+E ++RGER+YDI+SRLLKERII + G + D A+++VAQ+LFLE
Sbjct: 6 SEQLNPVQNALVPIVVEQTARGERSYDIYSRLLKERIIFLVGQVEDHMANLIVAQMLFLE 65
Query: 84 SENPSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGER 143
SENP K IH+Y+NSPGG VTAGLAIYDTMQ+I+ ++T+C+GQAASMG+LLL +G K +R
Sbjct: 66 SENPDKDIHLYINSPGGAVTAGLAIYDTMQFIKPQVSTLCIGQAASMGALLLTAGAKDKR 125
Query: 144 RALPNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRD 203
ALPNS IM+HQP GG+ GQA D+ IH K+I+ + D LN + HTGQ I I+++ DRD
Sbjct: 126 FALPNSRIMVHQPLGGFQGQASDIDIHAKEILSIRDRLNGIMAHHTGQDINKIERDTDRD 185
Query: 204 YFMTPEEAKEFGIIDEVIDQRP 225
FM E+A E+G+ID V+ RP
Sbjct: 186 NFMNGEQAAEYGLIDSVMKSRP 207
>gi|238023189|ref|ZP_04603615.1| hypothetical protein GCWU000324_03115 [Kingella oralis ATCC 51147]
gi|237865572|gb|EEP66712.1| hypothetical protein GCWU000324_03115 [Kingella oralis ATCC 51147]
Length = 206
Score = 258 bits (660), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 118/197 (59%), Positives = 160/197 (81%), Gaps = 2/197 (1%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+LIP VIE S RGERA+DI+SRLLKERII + GP+ND TA++VVAQLLFLESENP K I+
Sbjct: 9 TLIPTVIEQSGRGERAFDIYSRLLKERIIFLVGPVNDHTANLVVAQLLFLESENPDKDIY 68
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
Y+NSPGG VTAG++IYDTM++I+ + T+CLGQAASMG+ LL++GTKG+R ALPNS +M
Sbjct: 69 FYINSPGGSVTAGMSIYDTMKFIKPDVQTLCLGQAASMGAFLLSAGTKGKRFALPNSRVM 128
Query: 153 IHQP--SGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEE 210
IHQP SGG GQA D+ IH ++++++ + LN + +HTG+S+E I+++ DRD FM+ +E
Sbjct: 129 IHQPLISGGLGGQASDIEIHARELLKLKEKLNQMLAEHTGKSLEQIERDTDRDNFMSAQE 188
Query: 211 AKEFGIIDEVIDQRPMA 227
A ++G+ID+VI R A
Sbjct: 189 AADYGLIDKVITTRADA 205
>gi|85704731|ref|ZP_01035832.1| Protease subunit of ATP-dependent Clp protease [Roseovarius sp.
217]
gi|85670549|gb|EAQ25409.1| Protease subunit of ATP-dependent Clp protease [Roseovarius sp.
217]
Length = 210
Score = 258 bits (660), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 113/192 (58%), Positives = 158/192 (82%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E +SRGERAYDIFSRLLKERII ++GP++D + ++VAQLL LE+ENPSK I
Sbjct: 11 TLVPMVVEQTSRGERAYDIFSRLLKERIIFLSGPVHDGMSSLIVAQLLHLEAENPSKEIS 70
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
MY+NSPGG VT+GL+IYDTMQYI+ ++T+ +GQAASMGSLLL +G G R +LPNS +M
Sbjct: 71 MYINSPGGVVTSGLSIYDTMQYIKPKVSTLVVGQAASMGSLLLTAGEPGMRFSLPNSRVM 130
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
+HQPSGGY GQA D+ IH ++ ++ D LN +Y +HTGQ+++ +++ ++RD FM+P+EAK
Sbjct: 131 VHQPSGGYQGQATDIMIHARETQKLKDRLNEIYVRHTGQTLKKVEEALERDNFMSPDEAK 190
Query: 213 EFGIIDEVIDQR 224
+G+IDE++ R
Sbjct: 191 AWGLIDEIVANR 202
>gi|308271899|emb|CBX28507.1| ATP-dependent Clp protease proteolytic subunit [uncultured
Desulfobacterium sp.]
Length = 206
Score = 258 bits (660), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 117/191 (61%), Positives = 155/191 (81%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
LIPMVIE SSRGERAYDI+SRLLK+RII + +ND+ A++++AQLLFLESE+P K I+
Sbjct: 3 LIPMVIEQSSRGERAYDIYSRLLKDRIIFLGTAMNDEVANLLIAQLLFLESEDPDKDINF 62
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VT+GLA+YDTMQYI+S I T+C+GQAASMG+LLL +G KG+R ALPN+ I+I
Sbjct: 63 YINSPGGVVTSGLAVYDTMQYIKSDIATVCIGQAASMGALLLTAGAKGKRYALPNARILI 122
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQP GG+ GQA D+ I ++I+R+ D LN + HTG+ ++ IQ + DRDYFM+ +EA+E
Sbjct: 123 HQPMGGFQGQASDIAIQAREILRMKDTLNDILTFHTGKDLKQIQVDTDRDYFMSGKEAEE 182
Query: 214 FGIIDEVIDQR 224
+G+ID VI R
Sbjct: 183 YGLIDHVITNR 193
>gi|118594831|ref|ZP_01552178.1| Peptidase S14, ClpP [Methylophilales bacterium HTCC2181]
gi|118440609|gb|EAV47236.1| Peptidase S14, ClpP [Methylophilales bacterium HTCC2181]
Length = 209
Score = 258 bits (660), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 115/205 (56%), Positives = 161/205 (78%)
Query: 20 LSKPSAQISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQL 79
+++ + SA + IPMV+E S RGER+YDI+SRLLKER++ + GP++D TA+VVVAQL
Sbjct: 1 MTQSISTFSANNLGYIPMVVEQSGRGERSYDIYSRLLKERVVFLVGPVDDMTANVVVAQL 60
Query: 80 LFLESENPSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGT 139
LFLE+ENP K I +Y+NSPGG VTAG+AIYDTMQ+I+ I+T+C+GQAASMG+LLL +G
Sbjct: 61 LFLEAENPDKDISLYINSPGGSVTAGMAIYDTMQFIKPDISTLCIGQAASMGALLLTAGA 120
Query: 140 KGERRALPNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKN 199
+R +LPNS +MIHQP GG+ GQA D+ IH K+I+ + + LN + +H+GQS+E + K+
Sbjct: 121 AKKRFSLPNSRVMIHQPLGGFQGQASDIEIHAKEILYLKEKLNKIMAEHSGQSLEKVSKD 180
Query: 200 MDRDYFMTPEEAKEFGIIDEVIDQR 224
DRD FM+ ++A E+G+ID+VI R
Sbjct: 181 TDRDNFMSAKDAMEYGLIDKVISSR 205
>gi|398948873|ref|ZP_10672975.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
sp. GM33]
gi|398160047|gb|EJM48329.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
sp. GM33]
Length = 211
Score = 258 bits (660), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 112/192 (58%), Positives = 155/192 (80%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
L+PMV+E S+RGERAYDI+SRLLKER+I + GP+ D A+++ AQLLFLE+ENP K IH+
Sbjct: 19 LVPMVVEQSARGERAYDIYSRLLKERVIFLVGPVEDYMANLICAQLLFLEAENPDKDIHL 78
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VTAG++IYDTMQ+I+ ++T C+GQA SMG+ LL +G +G+R LPNS +MI
Sbjct: 79 YINSPGGSVTAGMSIYDTMQFIKPNVSTTCIGQACSMGAFLLTAGAQGKRYCLPNSRVMI 138
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQP GG+ GQA D+ IH K+I+ + + LN L KH+G+++E I+++ +RD FM+ E A+E
Sbjct: 139 HQPLGGFQGQASDIEIHAKEILFIRERLNTLMAKHSGRTLEEIERDTNRDNFMSAEAARE 198
Query: 214 FGIIDEVIDQRP 225
+G+IDEVI QRP
Sbjct: 199 YGLIDEVISQRP 210
>gi|398985563|ref|ZP_10691098.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
sp. GM24]
gi|399015406|ref|ZP_10717679.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
sp. GM16]
gi|398108657|gb|EJL98610.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
sp. GM16]
gi|398153942|gb|EJM42433.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
sp. GM24]
Length = 225
Score = 258 bits (660), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 113/192 (58%), Positives = 155/192 (80%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
L+PMV+E S+RGERAYDI+SRLLKER+I + GP+ D A+++ AQLLFLE+ENP K IH+
Sbjct: 33 LVPMVVEQSARGERAYDIYSRLLKERVIFLVGPVEDYMANLICAQLLFLEAENPDKDIHL 92
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VTAG++IYDTMQ+I+ ++T C+GQA SMG+ LL +G G+R LPNS +MI
Sbjct: 93 YINSPGGSVTAGMSIYDTMQFIKPNVSTTCIGQACSMGAFLLTAGAPGKRFCLPNSRVMI 152
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQP GG+ GQA D+ IH K+I+ + + LN L KH+G+++E I+++ +RD FM+ E AKE
Sbjct: 153 HQPLGGFQGQASDIEIHAKEILFIRERLNTLMAKHSGRTLEEIERDTNRDNFMSAEAAKE 212
Query: 214 FGIIDEVIDQRP 225
+G+IDEVI+QRP
Sbjct: 213 YGLIDEVINQRP 224
>gi|402487234|ref|ZP_10834056.1| ATP-dependent Clp protease proteolytic subunit [Rhizobium sp. CCGE
510]
gi|401813808|gb|EJT06148.1| ATP-dependent Clp protease proteolytic subunit [Rhizobium sp. CCGE
510]
Length = 202
Score = 258 bits (660), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 113/194 (58%), Positives = 155/194 (79%)
Query: 31 SFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKP 90
+ L+PMVIE SSRGER++DI+SRLL+ERII +NG +ND + +V AQLLFLE+ENP KP
Sbjct: 4 AMQLVPMVIEQSSRGERSFDIYSRLLRERIIFLNGEVNDTVSALVCAQLLFLEAENPKKP 63
Query: 91 IHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNST 150
I++Y+NSPGG VT+GLA+YDTM+YIR+P++T+C+G A SMGS LL +G GER LPN++
Sbjct: 64 IYLYINSPGGVVTSGLAMYDTMRYIRAPVHTLCMGTARSMGSFLLMAGEPGERATLPNAS 123
Query: 151 IMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEE 210
I+IHQPSGG+ GQA DM IH ++I++ + LY +H G+S E ++ MDRD FMTP+E
Sbjct: 124 ILIHQPSGGFQGQASDMQIHAEEILKTKQRMTRLYAEHCGRSYEDFERAMDRDRFMTPQE 183
Query: 211 AKEFGIIDEVIDQR 224
A E+G+ID+++ R
Sbjct: 184 ALEWGLIDKIMQVR 197
>gi|222110341|ref|YP_002552605.1| ATP-dependent clp protease proteolytic subunit [Acidovorax ebreus
TPSY]
gi|254763789|sp|B9MG14.1|CLPP_DIAST RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|221729785|gb|ACM32605.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Acidovorax
ebreus TPSY]
Length = 202
Score = 258 bits (660), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 117/199 (58%), Positives = 155/199 (77%)
Query: 27 ISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESEN 86
+ ++ +IPMVIE S RGER+YDI+SRLLKER+I + G +ND TA++VVAQLLFLESEN
Sbjct: 4 LETQALGMIPMVIEQSGRGERSYDIYSRLLKERVIFLVGEVNDQTANLVVAQLLFLESEN 63
Query: 87 PSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRAL 146
P K I Y+NSPGG VTAG+AIYDTMQ+I+ ++T+C G AASMG+ LLA+G KG+R +L
Sbjct: 64 PDKDISFYINSPGGSVTAGMAIYDTMQFIKPDVSTLCCGFAASMGAFLLAAGAKGKRYSL 123
Query: 147 PNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFM 206
PNS IMIHQ GG GQA D+ IH + I+R D +N + + TGQ IE ++ + +RDYFM
Sbjct: 124 PNSKIMIHQVLGGARGQATDIEIHARDILRTKDQMNRILAERTGQPIEKVKADTERDYFM 183
Query: 207 TPEEAKEFGIIDEVIDQRP 225
T +EAK++GI+D+VI +RP
Sbjct: 184 TADEAKDYGIVDQVIAKRP 202
>gi|416156277|ref|ZP_11604409.1| ATP-dependent Clp protease proteolytic subunit ClpP [Moraxella
catarrhalis 101P30B1]
gi|416216367|ref|ZP_11623691.1| ATP-dependent Clp protease proteolytic subunit ClpP [Moraxella
catarrhalis 7169]
gi|416220781|ref|ZP_11625590.1| ATP-dependent Clp protease proteolytic subunit ClpP [Moraxella
catarrhalis 103P14B1]
gi|416228844|ref|ZP_11627776.1| ATP-dependent Clp protease proteolytic subunit ClpP [Moraxella
catarrhalis 46P47B1]
gi|416236087|ref|ZP_11630453.1| ATP-dependent Clp protease proteolytic subunit ClpP [Moraxella
catarrhalis 12P80B1]
gi|416237864|ref|ZP_11631219.1| ATP-dependent Clp protease proteolytic subunit ClpP [Moraxella
catarrhalis BC1]
gi|416243368|ref|ZP_11633889.1| ATP-dependent Clp protease proteolytic subunit ClpP [Moraxella
catarrhalis BC7]
gi|416245839|ref|ZP_11634734.1| ATP-dependent Clp protease proteolytic subunit ClpP [Moraxella
catarrhalis BC8]
gi|416248951|ref|ZP_11636285.1| ATP-dependent Clp protease proteolytic subunit ClpP [Moraxella
catarrhalis CO72]
gi|416253183|ref|ZP_11638206.1| ATP-dependent Clp protease proteolytic subunit ClpP [Moraxella
catarrhalis O35E]
gi|421779131|ref|ZP_16215625.1| ATP-dependent Clp protease proteolytic subunit ClpP [Moraxella
catarrhalis RH4]
gi|326561827|gb|EGE12162.1| ATP-dependent Clp protease proteolytic subunit ClpP [Moraxella
catarrhalis 7169]
gi|326563259|gb|EGE13526.1| ATP-dependent Clp protease proteolytic subunit ClpP [Moraxella
catarrhalis 46P47B1]
gi|326563373|gb|EGE13638.1| ATP-dependent Clp protease proteolytic subunit ClpP [Moraxella
catarrhalis 12P80B1]
gi|326565911|gb|EGE16072.1| ATP-dependent Clp protease proteolytic subunit ClpP [Moraxella
catarrhalis 103P14B1]
gi|326568952|gb|EGE19021.1| ATP-dependent Clp protease proteolytic subunit ClpP [Moraxella
catarrhalis BC1]
gi|326569251|gb|EGE19312.1| ATP-dependent Clp protease proteolytic subunit ClpP [Moraxella
catarrhalis BC7]
gi|326571926|gb|EGE21931.1| ATP-dependent Clp protease proteolytic subunit ClpP [Moraxella
catarrhalis BC8]
gi|326575439|gb|EGE25364.1| ATP-dependent Clp protease proteolytic subunit ClpP [Moraxella
catarrhalis 101P30B1]
gi|326576473|gb|EGE26381.1| ATP-dependent Clp protease proteolytic subunit ClpP [Moraxella
catarrhalis CO72]
gi|326577944|gb|EGE27808.1| ATP-dependent Clp protease proteolytic subunit ClpP [Moraxella
catarrhalis O35E]
gi|407813572|gb|EKF84352.1| ATP-dependent Clp protease proteolytic subunit ClpP [Moraxella
catarrhalis RH4]
Length = 217
Score = 258 bits (660), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 112/196 (57%), Positives = 159/196 (81%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMVIE S RGER++DIFSRLL+ER+I + G + D+ A+++VAQLLFLE++NP K IH
Sbjct: 22 ALVPMVIEQSGRGERSFDIFSRLLRERVIFLTGQVEDNMANLIVAQLLFLEADNPEKDIH 81
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
+Y+NSPGG VTAG+AIYDTM +I+ ++TIC+GQAASMGS LL++G KG+R AL NS +M
Sbjct: 82 LYINSPGGVVTAGMAIYDTMNFIKPHVSTICMGQAASMGSFLLSAGEKGKRYALANSRVM 141
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQP GG+ GQA D+ IH ++I+ + LN L +HTGQ IE ++++ DRD+FM+ E+A+
Sbjct: 142 IHQPLGGFRGQASDIEIHAREIIELKAKLNRLLAEHTGQPIEKLERDTDRDHFMSAEQAR 201
Query: 213 EFGIIDEVIDQRPMAL 228
++G++D V+D+RP L
Sbjct: 202 DYGLVDVVLDKRPKNL 217
>gi|160947717|ref|ZP_02094884.1| hypothetical protein PEPMIC_01652 [Parvimonas micra ATCC 33270]
gi|158446851|gb|EDP23846.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Parvimonas micra ATCC 33270]
Length = 192
Score = 258 bits (660), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 117/191 (61%), Positives = 156/191 (81%)
Query: 32 FSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPI 91
+LIPMV+E ++RGER+YDI+SRLLKERII ++G +ND A ++VAQLLFLESE+P K I
Sbjct: 1 MALIPMVVEQTNRGERSYDIYSRLLKERIIFLSGEVNDQMADLIVAQLLFLESEDPKKDI 60
Query: 92 HMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTI 151
+Y+NSPGG V+AGLAIYDTMQYI+ ++TIC+G+AASMG+ LL SG KG+R ALPN+ I
Sbjct: 61 QIYINSPGGSVSAGLAIYDTMQYIKPDVSTICIGRAASMGAFLLTSGAKGKRFALPNADI 120
Query: 152 MIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEA 211
MIHQP GG GQA+D+ I ++I++V LN + K TGQS++ I+K+ DRD++M+ EA
Sbjct: 121 MIHQPLGGAQGQAEDIKIQAQKILQVRATLNEILAKRTGQSLKKIEKDTDRDFYMSAYEA 180
Query: 212 KEFGIIDEVID 222
KE+GIIDEVI+
Sbjct: 181 KEYGIIDEVIE 191
>gi|427428456|ref|ZP_18918497.1| ATP-dependent Clp protease proteolytic subunit [Caenispirillum
salinarum AK4]
gi|425882189|gb|EKV30871.1| ATP-dependent Clp protease proteolytic subunit [Caenispirillum
salinarum AK4]
Length = 228
Score = 258 bits (660), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 116/188 (61%), Positives = 152/188 (80%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
L+PMV+E ++RGER+YDI+SRLLKERI+ + GP+ D+ + +V AQ+L+LE++NPSK I
Sbjct: 17 LVPMVVEQTNRGERSYDIYSRLLKERILFLTGPVEDNVSALVCAQMLYLEADNPSKDIAF 76
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VT+GLA+YDTMQYIR + T+ +GQAASMGSLLLA G +R +LPNS IM+
Sbjct: 77 YINSPGGVVTSGLAMYDTMQYIRCDVATMVIGQAASMGSLLLAGGAPEKRFSLPNSRIMV 136
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQPSGG+ GQA D+ IH K+I+ + D LN +Y KHTGQ +E I+K M+RD FMTPEEAK
Sbjct: 137 HQPSGGFQGQAADIEIHAKEILSIRDRLNKIYVKHTGQPLEEIEKAMERDKFMTPEEAKA 196
Query: 214 FGIIDEVI 221
FG+ID V+
Sbjct: 197 FGLIDSVV 204
>gi|397676240|ref|YP_006517778.1| ATP-dependent Clp protease proteolytic subunit [Zymomonas mobilis
subsp. mobilis ATCC 29191]
gi|395396929|gb|AFN56256.1| ATP-dependent Clp protease proteolytic subunit [Zymomonas mobilis
subsp. mobilis ATCC 29191]
Length = 210
Score = 258 bits (660), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 121/195 (62%), Positives = 152/195 (77%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+LIPMV+E S+RGER++DI+SRLL+ERII + G + D A V+ AQLLFLE+ENP K I
Sbjct: 11 ALIPMVVEQSNRGERSFDIYSRLLRERIIFVTGQVEDHMASVICAQLLFLEAENPKKDIF 70
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
+Y+NSPGG VTAGLAI+DTMQYIR + T+C+GQAASMGS LLA+G G R A NS IM
Sbjct: 71 LYINSPGGVVTAGLAIHDTMQYIRPKVGTLCIGQAASMGSFLLAAGEPGMRVATTNSRIM 130
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQPSGG G A D+ I ++I+R+ LNALY K+T QSIE I+K MDRD F+ +EAK
Sbjct: 131 IHQPSGGAQGMAADIEIQAREILRMRKRLNALYAKYTNQSIEEIEKAMDRDNFLEADEAK 190
Query: 213 EFGIIDEVIDQRPMA 227
FG+ID+V D+RP+A
Sbjct: 191 SFGLIDKVFDKRPVA 205
>gi|392407107|ref|YP_006443715.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Anaerobaculum
mobile DSM 13181]
gi|390620243|gb|AFM21390.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Anaerobaculum
mobile DSM 13181]
Length = 192
Score = 258 bits (660), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 117/191 (61%), Positives = 154/191 (80%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
L+P+VIE + RGERAYDI+SRLLK+RII + I D A++VVAQ+LFLESE+P K I++
Sbjct: 2 LVPIVIEQTGRGERAYDIYSRLLKDRIIFLGDVIEDHIANLVVAQMLFLESEDPDKDINL 61
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VTAGL IYDTMQYI+ PI+TIC+GQAASM ++LLA+GTKG+R ALPNS +M+
Sbjct: 62 YINSPGGSVTAGLGIYDTMQYIKCPISTICVGQAASMAAVLLAAGTKGKRIALPNSRVML 121
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQP GG GQA D+ IH K+I ++ D LN + KHT Q IE + ++ DRD+FM+ EEA
Sbjct: 122 HQPLGGVQGQATDIEIHAKEIKKIRDRLNEIIAKHTNQDIEKVARDTDRDFFMSAEEALS 181
Query: 214 FGIIDEVIDQR 224
+GI+D+VI++R
Sbjct: 182 YGIVDKVIEKR 192
>gi|392959640|ref|ZP_10325122.1| ATP-dependent Clp protease proteolytic subunit [Pelosinus
fermentans DSM 17108]
gi|421052494|ref|ZP_15515483.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pelosinus
fermentans B4]
gi|421058665|ref|ZP_15521332.1| ATP-dependent Clp protease proteolytic subunit [Pelosinus
fermentans B3]
gi|421066386|ref|ZP_15528000.1| ATP-dependent Clp protease proteolytic subunit [Pelosinus
fermentans A12]
gi|421070550|ref|ZP_15531682.1| ATP-dependent Clp protease proteolytic subunit [Pelosinus
fermentans A11]
gi|392443225|gb|EIW20776.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pelosinus
fermentans B4]
gi|392448176|gb|EIW25379.1| ATP-dependent Clp protease proteolytic subunit [Pelosinus
fermentans A11]
gi|392456193|gb|EIW32947.1| ATP-dependent Clp protease proteolytic subunit [Pelosinus
fermentans DSM 17108]
gi|392456278|gb|EIW33029.1| ATP-dependent Clp protease proteolytic subunit [Pelosinus
fermentans A12]
gi|392460320|gb|EIW36635.1| ATP-dependent Clp protease proteolytic subunit [Pelosinus
fermentans B3]
Length = 201
Score = 258 bits (660), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 116/189 (61%), Positives = 156/189 (82%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+ +P+V+E SSRGER+YDIFSRLLK+RII I GPI+D+ A++V+AQLLFLESE+P K IH
Sbjct: 2 NFVPIVVEQSSRGERSYDIFSRLLKDRIIFIGGPIDDNVANLVIAQLLFLESEDPEKDIH 61
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
+Y+NSPGG VTAGLAIYDTMQYI+ ++TICLG AASMG+LLL +G KG+R ALP + IM
Sbjct: 62 VYINSPGGVVTAGLAIYDTMQYIKPDVSTICLGSAASMGALLLTAGAKGKRYALPYARIM 121
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQP GG GQA D+ IH ++I+R+ + LN + +HTGQ+ + I+ + +RD+FM+ E+AK
Sbjct: 122 IHQPLGGTQGQATDIEIHAREILRLRELLNGILIQHTGQTKDKIEHDTERDFFMSAEQAK 181
Query: 213 EFGIIDEVI 221
E+G+ID V+
Sbjct: 182 EYGLIDAVV 190
>gi|394987652|ref|ZP_10380491.1| ATP-dependent Clp protease proteolytic subunit [Sulfuricella
denitrificans skB26]
gi|393792871|dbj|GAB70130.1| ATP-dependent Clp protease proteolytic subunit [Sulfuricella
denitrificans skB26]
Length = 209
Score = 258 bits (660), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 113/195 (57%), Positives = 158/195 (81%)
Query: 30 RSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSK 89
++ ++PMVIE S RGERA+DI+SRLLKER+I + GP+ND TA+++VAQ+LFLES+NP K
Sbjct: 10 QNLGMVPMVIEQSGRGERAFDIYSRLLKERVIFLVGPVNDVTANLIVAQMLFLESDNPDK 69
Query: 90 PIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNS 149
I Y+NSPGG V+AG++IYDTMQ+I+ ++T+CLGQAASMGS LLA+G KG+R LPNS
Sbjct: 70 DIFFYINSPGGSVSAGMSIYDTMQFIKPDVSTLCLGQAASMGSFLLAAGAKGKRFCLPNS 129
Query: 150 TIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPE 209
+MIHQPSGG+ GQA D+ IH K+I+ + LN + +HTGQS++ I+K+ DRD FM+ +
Sbjct: 130 RVMIHQPSGGFQGQASDIEIHAKEILYLRQRLNTMLAQHTGQSVKTIEKDSDRDNFMSGD 189
Query: 210 EAKEFGIIDEVIDQR 224
EA ++G++D+V+ R
Sbjct: 190 EAVKYGLVDKVLANR 204
>gi|296112317|ref|YP_003626255.1| ATP-dependent Clp protease proteolytic subunit ClpP [Moraxella
catarrhalis RH4]
gi|295920011|gb|ADG60362.1| ATP-dependent Clp protease proteolytic subunit ClpP [Moraxella
catarrhalis BBH18]
Length = 217
Score = 258 bits (659), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 112/196 (57%), Positives = 159/196 (81%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMVIE S RGER++DIFSRLL+ER+I + G + D+ A+++VAQLLFLE++NP K IH
Sbjct: 22 ALVPMVIEQSGRGERSFDIFSRLLRERVIFLTGQVEDNMANLIVAQLLFLEADNPEKDIH 81
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
+Y+NSPGG VTAG+AIYDTM +I+ ++TIC+GQAASMGS LL++G KG+R AL NS +M
Sbjct: 82 LYINSPGGVVTAGMAIYDTMNFIKPHVSTICMGQAASMGSFLLSAGEKGKRYALANSRVM 141
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQP GG+ GQA D+ IH ++I+ + LN L +HTGQ IE ++++ DRD+FM+ E+A+
Sbjct: 142 IHQPLGGFRGQASDIEIHAREIIELKAKLNRLLAEHTGQPIEKLERDTDRDHFMSAEQAR 201
Query: 213 EFGIIDEVIDQRPMAL 228
++G++D V+D+RP L
Sbjct: 202 DYGLVDVVLDKRPKNL 217
>gi|424920020|ref|ZP_18343383.1| protease subunit of ATP-dependent protease [Rhizobium leguminosarum
bv. trifolii WSM597]
gi|392849035|gb|EJB01557.1| protease subunit of ATP-dependent protease [Rhizobium leguminosarum
bv. trifolii WSM597]
Length = 203
Score = 258 bits (659), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 112/194 (57%), Positives = 155/194 (79%)
Query: 31 SFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKP 90
+ L+PMV+E SSRGER++DI+SRLL+ERI+ +NG +ND + +V AQLLFLE+ENP KP
Sbjct: 4 AMQLVPMVVEQSSRGERSFDIYSRLLRERIVFLNGEVNDTVSALVCAQLLFLEAENPKKP 63
Query: 91 IHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNST 150
IH+Y+NSPGG VT+GLA+YDTM+YIR+P++T+C+G A SMGS LL +G GER ALPN++
Sbjct: 64 IHLYINSPGGVVTSGLAMYDTMRYIRAPVHTLCMGTARSMGSFLLMAGEPGERAALPNAS 123
Query: 151 IMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEE 210
I+IHQPSGG+ GQA DM IH ++I++ + LY +H G+S E ++ MDRD FMT +E
Sbjct: 124 ILIHQPSGGFQGQATDMQIHAEEILKTKQRMTRLYAEHCGRSYEDFERAMDRDRFMTSQE 183
Query: 211 AKEFGIIDEVIDQR 224
A E+G+ID+++ R
Sbjct: 184 ALEWGLIDKIMQLR 197
>gi|410943166|ref|ZP_11374907.1| ATP-dependent Clp protease proteolytic subunit [Gluconobacter
frateurii NBRC 101659]
Length = 214
Score = 258 bits (659), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 114/193 (59%), Positives = 154/193 (79%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
SL+PMV+E ++RGERA+DIFSRLL+ERII + GP+ D A ++ AQLL+LES NP+K I
Sbjct: 15 SLVPMVVEQTARGERAFDIFSRLLQERIIFLTGPVYDQVASLISAQLLYLESVNPTKEIS 74
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
Y+NSPGG V+AGLAIYDTMQYIR P++T+C+GQAASMGSLLLA G KG R LPN+ +M
Sbjct: 75 FYINSPGGVVSAGLAIYDTMQYIRCPVSTVCIGQAASMGSLLLAGGEKGHRYCLPNARVM 134
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
+HQPSGG GQA D+ I ++I+ + LN +Y +HTGQ++E I++ ++RD +++ EEAK
Sbjct: 135 VHQPSGGAQGQASDIEIQAREILLIRQRLNEIYREHTGQTLEEIERKLERDSYLSAEEAK 194
Query: 213 EFGIIDEVIDQRP 225
EFG+ID V+ + P
Sbjct: 195 EFGLIDAVVRRHP 207
>gi|398827196|ref|ZP_10585410.1| protease subunit of ATP-dependent protease [Phyllobacterium sp.
YR531]
gi|398220042|gb|EJN06502.1| protease subunit of ATP-dependent protease [Phyllobacterium sp.
YR531]
Length = 209
Score = 258 bits (659), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 114/194 (58%), Positives = 153/194 (78%)
Query: 31 SFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKP 90
+ +L+PMV+E ++RGERAYDIFSRLLKERII I GPI D A ++ AQLLFLESENP K
Sbjct: 8 AMNLVPMVVEQTNRGERAYDIFSRLLKERIIFITGPIEDGMATLICAQLLFLESENPKKE 67
Query: 91 IHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNST 150
I++Y+NSPGG VT+G+AIYDTMQ+IR ++T+C GQAASMGSLLL +G K R LPN+
Sbjct: 68 INLYINSPGGVVTSGMAIYDTMQFIRPAVSTLCFGQAASMGSLLLTAGEKDMRFVLPNAR 127
Query: 151 IMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEE 210
IM+HQPSGG+ GQA D+ H + I+++ LN +Y KHTGQ E I++ +DRD+FMT +E
Sbjct: 128 IMLHQPSGGFQGQASDIERHAQDIIKMKRRLNEIYVKHTGQDYETIERTLDRDHFMTAQE 187
Query: 211 AKEFGIIDEVIDQR 224
+ +FG++D++ + R
Sbjct: 188 SLDFGLVDKMFESR 201
>gi|424922478|ref|ZP_18345839.1| ClpP [Pseudomonas fluorescens R124]
gi|404303638|gb|EJZ57600.1| ClpP [Pseudomonas fluorescens R124]
Length = 211
Score = 258 bits (659), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 113/192 (58%), Positives = 154/192 (80%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
L+PMV+E S+RGERAYDI+SRLLKER+I + GP+ D A+++ AQLLFLE+ENP K IH+
Sbjct: 19 LVPMVVEQSARGERAYDIYSRLLKERVIFLVGPVEDYMANLICAQLLFLEAENPDKDIHL 78
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VTAG++IYDTMQ+I+ ++T C+GQA SMG+ LL +G G+R LPNS +MI
Sbjct: 79 YINSPGGSVTAGMSIYDTMQFIKPNVSTTCIGQACSMGAFLLTAGAPGKRFCLPNSRVMI 138
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQP GG+ GQA D+ IH K+I+ + + LN L KH+G+++E I+++ +RD FM+ E AKE
Sbjct: 139 HQPLGGFQGQASDIEIHAKEILFIRERLNTLMAKHSGRTLEEIERDTNRDNFMSAEAAKE 198
Query: 214 FGIIDEVIDQRP 225
+G+IDEVI QRP
Sbjct: 199 YGLIDEVISQRP 210
>gi|294627913|ref|ZP_06706492.1| ATP-dependent Clp protease proteolytic subunit [Xanthomonas fuscans
subsp. aurantifolii str. ICPB 11122]
gi|292597827|gb|EFF41985.1| ATP-dependent Clp protease proteolytic subunit [Xanthomonas fuscans
subsp. aurantifolii str. ICPB 11122]
Length = 208
Score = 258 bits (659), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 115/199 (57%), Positives = 160/199 (80%)
Query: 27 ISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESEN 86
I ++ +L+PMV+E +SRGERAYDI+S LLKER+I + GPI+D A+V+VAQLLFLE++N
Sbjct: 3 IVTKALNLVPMVVEQTSRGERAYDIYSCLLKERLIFLVGPIDDHMANVIVAQLLFLEADN 62
Query: 87 PSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRAL 146
P K I +Y+NSPGG VTAG+AIYDTMQYI+ ++TIC+GQAASMG+LLLASG G+R AL
Sbjct: 63 PEKDISIYINSPGGVVTAGMAIYDTMQYIKPDVSTICVGQAASMGALLLASGAAGKRYAL 122
Query: 147 PNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFM 206
PNS +MIHQP GG+ GQA D+ IH ++I+ + LN + KHTGQS+E I ++ +RD F
Sbjct: 123 PNSRVMIHQPLGGFQGQATDIDIHAREILTLRSRLNEILAKHTGQSLETIARDTERDNFK 182
Query: 207 TPEEAKEFGIIDEVIDQRP 225
+ +A+ +G++D+V+++RP
Sbjct: 183 SAVDAQAYGLVDQVLERRP 201
>gi|220927143|ref|YP_002502445.1| ATP-dependent Clp protease proteolytic subunit [Methylobacterium
nodulans ORS 2060]
gi|254763797|sp|B8IN26.1|CLPP_METNO RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|219951750|gb|ACL62142.1| peptidase S14 ClpP [Methylobacterium nodulans ORS 2060]
Length = 209
Score = 258 bits (659), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 116/195 (59%), Positives = 155/195 (79%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E SSRGERA+DI+SRLL+ERII + GP+ D +A ++VAQLLFLE+ENP K I
Sbjct: 11 ALVPMVVEQSSRGERAFDIYSRLLRERIIFLTGPVEDYSASLIVAQLLFLEAENPKKEIS 70
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
Y+NSPGG VT+GL+IYDTMQ+IR P+ T+C+GQAASMGSLLLA+G G R ALPN+ IM
Sbjct: 71 FYINSPGGVVTSGLSIYDTMQFIRCPVATLCVGQAASMGSLLLAAGEPGHRFALPNARIM 130
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
+HQPSGG+ GQA D+ IH ++I + LN +Y KHTG+ + I+ ++RD FMT + A+
Sbjct: 131 VHQPSGGFQGQATDILIHAREIEALKRRLNEIYVKHTGRDYDTIELGLERDNFMTADAAR 190
Query: 213 EFGIIDEVIDQRPMA 227
E+G+IDEV+ +R A
Sbjct: 191 EWGLIDEVLQKRAEA 205
>gi|28198386|ref|NP_778700.1| ATP-dependent Clp protease proteolytic subunit [Xylella fastidiosa
Temecula1]
gi|182681028|ref|YP_001829188.1| ATP-dependent Clp protease proteolytic subunit [Xylella fastidiosa
M23]
gi|386084549|ref|YP_006000831.1| ATP-dependent Clp protease proteolytic subunit [Xylella fastidiosa
subsp. fastidiosa GB514]
gi|32129456|sp|Q87E51.1|CLPP_XYLFT RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|226706560|sp|B2I8K3.1|CLPP_XYLF2 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|28056456|gb|AAO28349.1| ATP-dependent Clp protease proteolytic subunit [Xylella fastidiosa
Temecula1]
gi|182631138|gb|ACB91914.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Xylella
fastidiosa M23]
gi|307579496|gb|ADN63465.1| ATP-dependent Clp protease proteolytic subunit [Xylella fastidiosa
subsp. fastidiosa GB514]
Length = 208
Score = 258 bits (659), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 116/200 (58%), Positives = 159/200 (79%)
Query: 30 RSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSK 89
++ +L+PMV+E +SRGERAYDI+SRLLKER+I + GPI+D A+++VAQLLFLE+ENP K
Sbjct: 6 KALNLVPMVVEQTSRGERAYDIYSRLLKERLIFLVGPIDDYMANLIVAQLLFLEAENPEK 65
Query: 90 PIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNS 149
I++Y+NSPGG VTAG+AIYDTMQYI+ ++TIC+GQAASMG+LLLASG G+R ALPNS
Sbjct: 66 DINIYINSPGGVVTAGMAIYDTMQYIKPAVSTICVGQAASMGALLLASGASGKRYALPNS 125
Query: 150 TIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPE 209
+MIHQP GG+ GQA D+ IH ++I+ + LN + KHTGQS+E I + +RD F +
Sbjct: 126 RVMIHQPLGGFQGQATDIDIHAREILALRARLNEILAKHTGQSLETIAHDTERDNFKSAV 185
Query: 210 EAKEFGIIDEVIDQRPMALV 229
+A+ +G++D+V QR L+
Sbjct: 186 DAQAYGLVDQVFGQRQEELI 205
>gi|145642383|ref|ZP_01797943.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
influenzae R3021]
gi|145272926|gb|EDK12812.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
influenzae 22.4-21]
Length = 193
Score = 258 bits (659), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 115/192 (59%), Positives = 157/192 (81%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
S+IPMV+E +SRGER+YDI+SRLLKER+I ++G + D A+++VAQLLFLESE+P+K I+
Sbjct: 2 SVIPMVVEQTSRGERSYDIYSRLLKERVIFLSGEVEDRMANLIVAQLLFLESEDPTKDIN 61
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
+Y+NSPGG VTAG+AIYDTMQ+I+S I T+C+GQA SMG+ LLA GT G+R ALPN+ +M
Sbjct: 62 IYINSPGGSVTAGMAIYDTMQFIKSDIRTLCIGQACSMGAFLLAGGTAGKRAALPNARVM 121
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQP GG+ GQA D+ IH ++I+++ LN HTGQSIE I+K+ DRD FM+ EEA+
Sbjct: 122 IHQPLGGFRGQASDIQIHAQEILKIKHTLNDRLAFHTGQSIERIEKDTDRDNFMSAEEAQ 181
Query: 213 EFGIIDEVIDQR 224
+G++DEV+ +R
Sbjct: 182 AYGLVDEVLVKR 193
>gi|374583503|ref|ZP_09656597.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfosporosinus youngiae DSM 17734]
gi|374419585|gb|EHQ92020.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfosporosinus youngiae DSM 17734]
Length = 205
Score = 258 bits (659), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 114/193 (59%), Positives = 158/193 (81%), Gaps = 3/193 (1%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
L+PMV+E ++RGER+YDI+SRLLK+RII + G I+ D A+++VAQ+LFLE+E+P K I++
Sbjct: 4 LVPMVVEQTNRGERSYDIYSRLLKDRIIFLGGAIDADVANLIVAQMLFLEAEDPEKDINL 63
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG +TAG+AIYDTMQYIRS + TIC+G AASMG+ LLASGTKG+R ALPNS ++I
Sbjct: 64 YINSPGGSITAGMAIYDTMQYIRSDVRTICIGMAASMGAFLLASGTKGKRVALPNSEVLI 123
Query: 154 HQP---SGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEE 210
HQP GG SGQA ++ IH KQ++R +N + + TGQ IE ++K+ DRDY+MT EE
Sbjct: 124 HQPLIGGGGLSGQATEIEIHAKQLLRTKAKMNKILAERTGQPIEKVEKDTDRDYYMTAEE 183
Query: 211 AKEFGIIDEVIDQ 223
AKE+G++D+V+++
Sbjct: 184 AKEYGLVDQVLEK 196
>gi|407364028|ref|ZP_11110560.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
mandelii JR-1]
Length = 211
Score = 258 bits (659), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 112/192 (58%), Positives = 154/192 (80%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
L+PMV+E S+RGERAYDI+SRLLKER+I + GP+ D A+++ AQLLFLE+ENP K IH+
Sbjct: 19 LVPMVVEQSARGERAYDIYSRLLKERVIFLVGPVEDYMANLICAQLLFLEAENPDKDIHL 78
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VTAG++IYDTMQ+I+ ++T C+GQA SMG+ LL +G G+R LPNS +MI
Sbjct: 79 YINSPGGSVTAGMSIYDTMQFIKPNVSTTCIGQACSMGAFLLTAGAAGKRYCLPNSRVMI 138
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQP GG+ GQA D+ IH K+I+ + + LN L KH+G ++E I+++ +RD FM+ E A+E
Sbjct: 139 HQPLGGFQGQASDIEIHAKEILFIRERLNTLMAKHSGHTLEEIERDTNRDNFMSAEAARE 198
Query: 214 FGIIDEVIDQRP 225
+G+IDEVI+QRP
Sbjct: 199 YGLIDEVINQRP 210
>gi|341616021|ref|ZP_08702890.1| ATP-dependent Clp protease proteolytic subunit [Citromicrobium sp.
JLT1363]
Length = 228
Score = 258 bits (659), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 116/193 (60%), Positives = 153/193 (79%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+P+V+E +SRGER++DIFSRLL+ERI+ I GP+ D A + VAQLLFLESENPSKPI
Sbjct: 16 ALVPVVVEQTSRGERSFDIFSRLLRERIVFITGPVEDGMASLAVAQLLFLESENPSKPIS 75
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
MY+NSPGG VTAG+AI+DTMQYIR I+T+C+GQAASMGS LLA+G G R ALPN+ IM
Sbjct: 76 MYINSPGGVVTAGMAIHDTMQYIRPRISTVCVGQAASMGSFLLAAGEPGMRIALPNARIM 135
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
+HQPSGG G A D+ I ++I+R+ +N LY K+TG+ + I++ MDRD F+ +EA
Sbjct: 136 VHQPSGGAQGMASDIEIQAREILRIRKNMNELYAKYTGKELSEIEEAMDRDTFLDAKEAM 195
Query: 213 EFGIIDEVIDQRP 225
+FGI+D+V + RP
Sbjct: 196 KFGIVDKVFETRP 208
>gi|307942062|ref|ZP_07657413.1| Clp protease [Roseibium sp. TrichSKD4]
gi|307774348|gb|EFO33558.1| Clp protease [Roseibium sp. TrichSKD4]
Length = 211
Score = 258 bits (659), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 115/192 (59%), Positives = 156/192 (81%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E ++RGER++DI+SRLLKERII + GPI D A +V AQLLFLE++NPSK I
Sbjct: 11 TLVPMVVEQTNRGERSFDIYSRLLKERIIFLTGPIEDHVATLVCAQLLFLEADNPSKEIA 70
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
+Y+NSPGG VT+GLAIYDTMQ+IR ++T+C+GQAASMGSLLLA G K R +LPN+ +M
Sbjct: 71 IYINSPGGLVTSGLAIYDTMQFIRPAVSTLCIGQAASMGSLLLAGGEKDMRFSLPNARVM 130
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
+HQPSGG+ GQA D+ +H ++I+ + LN +Y KHTGQS++ +++ ++RD FMT E+AK
Sbjct: 131 VHQPSGGFRGQAADIMLHAQEILAMKRRLNEIYVKHTGQSLDEVEEALERDNFMTAEKAK 190
Query: 213 EFGIIDEVIDQR 224
EFGI+D VI R
Sbjct: 191 EFGIVDSVITDR 202
>gi|94264491|ref|ZP_01288278.1| Endopeptidase Clp [delta proteobacterium MLMS-1]
gi|94266601|ref|ZP_01290283.1| Endopeptidase Clp [delta proteobacterium MLMS-1]
gi|93452772|gb|EAT03310.1| Endopeptidase Clp [delta proteobacterium MLMS-1]
gi|93455050|gb|EAT05277.1| Endopeptidase Clp [delta proteobacterium MLMS-1]
Length = 200
Score = 258 bits (659), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 116/195 (59%), Positives = 156/195 (80%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
SLIP VIE + RGER+YDI+SRLLKERII + +ND+ A+VV+AQ+LFLE+++P K I
Sbjct: 2 SLIPFVIEQTPRGERSYDIYSRLLKERIIFLGTGVNDEVANVVIAQMLFLEADDPDKDIT 61
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
Y+NSPGG VTAGLAIYDTM+Y++ I T+CLGQAASMG++LLA+GTKG+R ALPN+ I+
Sbjct: 62 FYINSPGGSVTAGLAIYDTMRYVKCDIATLCLGQAASMGAVLLAAGTKGKRYALPNARIL 121
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQP GG+ GQA D+ IH ++I+R+ LN + HTGQ ++ IQ + +RDYFM+ EEAK
Sbjct: 122 IHQPMGGFQGQASDIDIHAREILRMRQGLNKMLADHTGQKLKKIQTDTERDYFMSSEEAK 181
Query: 213 EFGIIDEVIDQRPMA 227
+G+ID+V+ +R A
Sbjct: 182 TYGLIDKVLLERTTA 196
>gi|146295915|ref|YP_001179686.1| ATP-dependent Clp protease proteolytic subunit
[Caldicellulosiruptor saccharolyticus DSM 8903]
gi|166201809|sp|A4XHW0.1|CLPP_CALS8 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|145409491|gb|ABP66495.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Caldicellulosiruptor saccharolyticus DSM 8903]
Length = 195
Score = 258 bits (659), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 115/193 (59%), Positives = 158/193 (81%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+P+VIE ++RGERAYDI+SRLLK+RI+ ++G I DD A ++VAQLLFLE+E+P K I+
Sbjct: 3 ALVPIVIEQTNRGERAYDIYSRLLKDRIVILSGEITDDIASLIVAQLLFLEAEDPDKDIY 62
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
+Y+NSPGG VTAG AIYDT+QYI+ ++TIC+G AASMG+ LLA+G KG+R ALPNS IM
Sbjct: 63 LYINSPGGSVTAGFAIYDTIQYIKPDVSTICVGMAASMGAFLLAAGAKGKRFALPNSEIM 122
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQP GG GQA D+ IH + I+++ +N + + TGQ IEVI+++ +RD+FMT EEA
Sbjct: 123 IHQPIGGVRGQATDIKIHAEWILKIKQRINRILAERTGQPIEVIERDTERDFFMTAEEAL 182
Query: 213 EFGIIDEVIDQRP 225
++GIID+VI++RP
Sbjct: 183 KYGIIDKVIERRP 195
>gi|15895898|ref|NP_349247.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
acetobutylicum ATCC 824]
gi|337737851|ref|YP_004637298.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
acetobutylicum DSM 1731]
gi|384459361|ref|YP_005671781.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
acetobutylicum EA 2018]
gi|18202304|sp|P58276.1|CLPP_CLOAB RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|15025667|gb|AAK80587.1|AE007761_6 Protease subunits of ATP-dependent protease, ClpP [Clostridium
acetobutylicum ATCC 824]
gi|325510050|gb|ADZ21686.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
acetobutylicum EA 2018]
gi|336292077|gb|AEI33211.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
acetobutylicum DSM 1731]
Length = 193
Score = 258 bits (659), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 115/189 (60%), Positives = 155/189 (82%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
SL+P VIE +SRGER+YDI+SRLLK+R+I + +ND TA +VVAQLLFLESE+P K I+
Sbjct: 2 SLVPYVIEQTSRGERSYDIYSRLLKDRVIFLGEEVNDTTASLVVAQLLFLESEDPDKDIY 61
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
+Y+NSPGG +T+G+AIYDTMQY++ ++TIC+G AASMGS LL +G G+R ALPNS IM
Sbjct: 62 LYINSPGGSITSGMAIYDTMQYVKPDVSTICIGMAASMGSFLLTAGAPGKRFALPNSEIM 121
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQP GG+ GQA D+ IH ++I+ + LN++Y + TG+ IEVI+K+ DRD+F++ EEAK
Sbjct: 122 IHQPLGGFKGQATDIGIHAQRILEIKKKLNSIYSERTGKPIEVIEKDTDRDHFLSAEEAK 181
Query: 213 EFGIIDEVI 221
E+G+IDEVI
Sbjct: 182 EYGLIDEVI 190
>gi|440227517|ref|YP_007334608.1| ATP-dependent Clp protease proteolytic subunit 2 [Rhizobium tropici
CIAT 899]
gi|440039028|gb|AGB72062.1| ATP-dependent Clp protease proteolytic subunit 2 [Rhizobium tropici
CIAT 899]
Length = 207
Score = 258 bits (659), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 114/202 (56%), Positives = 158/202 (78%), Gaps = 4/202 (1%)
Query: 31 SFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKP 90
+ L+PMV+E SSRGER++DI+SRLL+ERII +NG +NDD + +V AQLLFLE+ENP +P
Sbjct: 4 AMQLVPMVVEQSSRGERSFDIYSRLLRERIIFLNGEVNDDVSALVCAQLLFLEAENPKRP 63
Query: 91 IHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNST 150
IH+Y+NSPGG VT+GLA+YDTM+Y+R+P++T+C+G A SMGS LL SG GER ALPN++
Sbjct: 64 IHLYINSPGGVVTSGLAMYDTMRYVRAPVHTLCMGTARSMGSFLLMSGQPGERTALPNAS 123
Query: 151 IMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEE 210
I IHQP GG+ GQA D+ IH +++ R + LY +H G+S E ++ MDRD+FMT EE
Sbjct: 124 IHIHQPLGGFQGQASDIFIHAEEMRRTKHRMTRLYAEHCGRSYEEFERAMDRDHFMTAEE 183
Query: 211 AKEFGIIDEVI----DQRPMAL 228
A E+G+ID ++ D++P+ L
Sbjct: 184 ALEWGLIDRILQVREDEQPLGL 205
>gi|346470813|gb|AEO35251.1| hypothetical protein [Amblyomma maculatum]
Length = 236
Score = 258 bits (659), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 116/194 (59%), Positives = 152/194 (78%)
Query: 32 FSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPI 91
L+P+VIE + RGERAYDI+SRLLKERI+C+ GPI D+ + +VVAQLLFL+SE+ KP+
Sbjct: 34 LPLVPIVIEQTGRGERAYDIYSRLLKERIVCVMGPITDEMSSLVVAQLLFLQSESNKKPV 93
Query: 92 HMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTI 151
HMY+NSPGG VTAGL I+DTMQYI PI+T C+GQA SM SLLL +GT G R++LPNS I
Sbjct: 94 HMYINSPGGSVTAGLGIFDTMQYIMPPISTWCIGQACSMASLLLCAGTPGMRQSLPNSRI 153
Query: 152 MIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEA 211
M+HQPSG GQA D+ IH ++I+++ +N +Y KHT Q +EVI+ M+RD FM+ +A
Sbjct: 154 MVHQPSGQAVGQATDIQIHAEEIIKLKRTINTIYAKHTKQPLEVIESAMERDRFMSAIQA 213
Query: 212 KEFGIIDEVIDQRP 225
KEFG+ID V++ P
Sbjct: 214 KEFGLIDAVLEHPP 227
>gi|359411825|ref|ZP_09204290.1| ATP-dependent Clp protease proteolytic subunit [Clostridium sp.
DL-VIII]
gi|357170709|gb|EHI98883.1| ATP-dependent Clp protease proteolytic subunit [Clostridium sp.
DL-VIII]
Length = 199
Score = 258 bits (659), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 112/189 (59%), Positives = 157/189 (83%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E +SRGER+YDIFSRLLKERII ++G +NDD+A+++VAQLLFLESE+P K I+
Sbjct: 2 ALVPMVVEQTSRGERSYDIFSRLLKERIIMLSGEVNDDSANLIVAQLLFLESEDPDKDIY 61
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
+Y+NSPGG +TAG AIYDTMQYI+ ++TIC+G AASMG+ LL+ G KG+R ALPN+ +M
Sbjct: 62 LYINSPGGSITAGNAIYDTMQYIKCDVSTICIGMAASMGAFLLSCGAKGKRYALPNAEVM 121
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQP GG+ GQA D IH K+I+++ + LN + ++TG+ +E I+ +++RD FMT EEAK
Sbjct: 122 IHQPLGGFQGQATDFEIHAKRILKMKETLNKILSENTGKPLETIKADVERDNFMTAEEAK 181
Query: 213 EFGIIDEVI 221
+G++D+VI
Sbjct: 182 AYGLVDDVI 190
>gi|414343400|ref|YP_006984921.1| protein ClpP [Gluconobacter oxydans H24]
gi|411028735|gb|AFW01990.1| ClpP [Gluconobacter oxydans H24]
gi|453331358|dbj|GAC86937.1| ATP-dependent Clp protease proteolytic subunit [Gluconobacter
thailandicus NBRC 3255]
Length = 214
Score = 258 bits (659), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 114/193 (59%), Positives = 154/193 (79%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
SL+PMV+E ++RGERA+DIFSRLL+ERII + GP+ D A ++ AQLL+LES NP+K I
Sbjct: 15 SLVPMVVEQTARGERAFDIFSRLLQERIIFLTGPVYDQVASLISAQLLYLESVNPTKEIS 74
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
Y+NSPGG V+AGLAIYDTMQYIR P++T+C+GQAASMGSLLLA G KG R LPN+ +M
Sbjct: 75 FYINSPGGVVSAGLAIYDTMQYIRCPVSTVCIGQAASMGSLLLAGGEKGHRYCLPNARVM 134
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
+HQPSGG GQA D+ I ++I+ + LN +Y +HTGQ++E I++ ++RD +++ EEAK
Sbjct: 135 VHQPSGGAQGQASDIEIQAREILLIRQRLNEIYREHTGQTLEEIERKLERDSYLSAEEAK 194
Query: 213 EFGIIDEVIDQRP 225
EFG+ID V+ + P
Sbjct: 195 EFGLIDAVVRRHP 207
>gi|326795825|ref|YP_004313645.1| ATP-dependent Clp protease proteolytic subunit [Marinomonas
mediterranea MMB-1]
gi|326546589|gb|ADZ91809.1| ATP-dependent Clp protease proteolytic subunit [Marinomonas
mediterranea MMB-1]
Length = 210
Score = 258 bits (659), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 114/205 (55%), Positives = 160/205 (78%)
Query: 20 LSKPSAQISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQL 79
++ + ++ S L+PMVIE ++RGER++DI+SRLLKER+I + G + D A++VVAQL
Sbjct: 4 MTPTTGPVAITSNGLVPMVIEQTARGERSFDIYSRLLKERVIFLVGQVEDHMANLVVAQL 63
Query: 80 LFLESENPSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGT 139
LFLESENP K IH+Y+NSPGG VTAG++IYDTMQ+I+ ++T+C+GQAASMG+LLL +G
Sbjct: 64 LFLESENPDKDIHLYINSPGGSVTAGMSIYDTMQFIKPDVSTMCIGQAASMGALLLTAGA 123
Query: 140 KGERRALPNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKN 199
G+R LPNS +MIHQP GGY GQA D+ IHT++I+ + LN + HTGQ IE + ++
Sbjct: 124 AGKRYCLPNSRVMIHQPLGGYQGQASDIEIHTREILSIKHRLNEIIAHHTGQPIEKVAED 183
Query: 200 MDRDYFMTPEEAKEFGIIDEVIDQR 224
DRD FM PE AKE+G+ID+++++R
Sbjct: 184 TDRDNFMNPESAKEYGLIDDILEKR 208
>gi|118590047|ref|ZP_01547451.1| ATP-dependent Clp protease proteolytic subunit [Stappia aggregata
IAM 12614]
gi|118437544|gb|EAV44181.1| ATP-dependent Clp protease proteolytic subunit [Stappia aggregata
IAM 12614]
Length = 211
Score = 258 bits (659), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 114/192 (59%), Positives = 158/192 (82%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E ++RGERA+DI+SRLLKERII + GP+ D A +V AQLL+LE+ENPSK I
Sbjct: 11 TLVPMVVEQTNRGERAFDIYSRLLKERIIFLTGPVEDHMATLVSAQLLYLEAENPSKEIA 70
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
+Y+NSPGG VT+GLAIYDTMQ+IR ++T+C+GQAASMGSLLLA+G KG R LPN+ +M
Sbjct: 71 IYINSPGGLVTSGLAIYDTMQFIRPAVSTLCIGQAASMGSLLLAAGEKGMRYILPNARVM 130
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
+HQPSGG+ GQA D+ +H ++I+ + LN +Y KHTG++++ +++ ++RD FMT E+AK
Sbjct: 131 VHQPSGGFRGQAADIMLHAQEILAMKRRLNDIYVKHTGRTLDQVEEALERDNFMTAEKAK 190
Query: 213 EFGIIDEVIDQR 224
EFGI+D+VI R
Sbjct: 191 EFGIVDKVITDR 202
>gi|71276511|ref|ZP_00652786.1| Peptidase S14, ClpP [Xylella fastidiosa Dixon]
gi|170729732|ref|YP_001775165.1| ATP-dependent Clp protease proteolytic subunit [Xylella fastidiosa
M12]
gi|226706561|sp|B0U5N1.1|CLPP_XYLFM RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|71162688|gb|EAO12415.1| Peptidase S14, ClpP [Xylella fastidiosa Dixon]
gi|71729635|gb|EAO31739.1| Peptidase S14, ClpP [Xylella fastidiosa Ann-1]
gi|167964525|gb|ACA11535.1| Endopeptidase Clp [Xylella fastidiosa M12]
Length = 208
Score = 258 bits (659), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 116/200 (58%), Positives = 159/200 (79%)
Query: 30 RSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSK 89
++ +L+PMV+E +SRGERAYDI+SRLLKER+I + GPI+D A+++VAQLLFLE+ENP K
Sbjct: 6 KALNLVPMVVEQTSRGERAYDIYSRLLKERLIFLVGPIDDYMANLIVAQLLFLEAENPEK 65
Query: 90 PIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNS 149
I++Y+NSPGG VTAG+AIYDTMQYI+ ++TIC+GQAASMG+LLLASG G+R ALPNS
Sbjct: 66 DINIYINSPGGVVTAGMAIYDTMQYIKPAVSTICVGQAASMGALLLASGASGKRYALPNS 125
Query: 150 TIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPE 209
+MIHQP GG+ GQA D+ IH ++I+ + LN + KHTGQS+E I + +RD F +
Sbjct: 126 RVMIHQPLGGFQGQATDVDIHAREILALRARLNEILAKHTGQSLETIAHDTERDNFKSAV 185
Query: 210 EAKEFGIIDEVIDQRPMALV 229
+A+ +G++D+V QR L+
Sbjct: 186 DAQAYGLVDQVFGQRQEELI 205
>gi|170720927|ref|YP_001748615.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas putida
W619]
gi|325274289|ref|ZP_08140400.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas sp.
TJI-51]
gi|226706466|sp|B1J692.1|CLPP_PSEPW RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|169758930|gb|ACA72246.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
putida W619]
gi|324100572|gb|EGB98307.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas sp.
TJI-51]
Length = 213
Score = 258 bits (659), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 114/194 (58%), Positives = 153/194 (78%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
L+PMVIE S+RGERAYDI+SRLLKER+I + GP+ D A++VVAQ+LFLE+ENP K IH+
Sbjct: 19 LVPMVIEQSARGERAYDIYSRLLKERVIFLVGPVEDYMANLVVAQMLFLEAENPDKDIHL 78
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VTAG++IYDTMQ+I+ ++TIC+GQA SMG+ LLA+G KG+R LPNS +MI
Sbjct: 79 YINSPGGSVTAGMSIYDTMQFIKPDVSTICIGQACSMGAFLLAAGAKGKRHCLPNSRVMI 138
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQP GG+ GQA D+ IH ++I+ + LN L HTGQ +E I+++ +RD FM+ A E
Sbjct: 139 HQPLGGFQGQATDIEIHAQEILNIKARLNELLAYHTGQDLETIKRDTERDNFMSASRAAE 198
Query: 214 FGIIDEVIDQRPMA 227
+G+ID V D+R +A
Sbjct: 199 YGLIDSVYDKRQLA 212
>gi|225848210|ref|YP_002728373.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Sulfurihydrogenibium azorense Az-Fu1]
gi|225644423|gb|ACN99473.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Sulfurihydrogenibium azorense Az-Fu1]
Length = 202
Score = 258 bits (659), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 117/191 (61%), Positives = 154/191 (80%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
L+P+VIE + RGERAYDI+SRLLK+RII + PI+D A+++VAQLLFLE+E+P K I+M
Sbjct: 8 LVPIVIEQTPRGERAYDIYSRLLKDRIILLGTPIDDHVANLIVAQLLFLEAEDPEKDIYM 67
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VTAG AIYDTM YI+ + TIC+GQAASMG+ LL++G KG+R +LPN+ IMI
Sbjct: 68 YINSPGGVVTAGFAIYDTMNYIKPDVVTICIGQAASMGAFLLSAGAKGKRYSLPNARIMI 127
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQP GG+ GQA D+ IH ++I+R+ LN KHTGQ IE I+ + +RDYFM+ EEAKE
Sbjct: 128 HQPLGGFQGQATDIEIHAREILRLKRMLNEYLAKHTGQPIEKIEADTERDYFMSAEEAKE 187
Query: 214 FGIIDEVIDQR 224
+G+ID+VI +R
Sbjct: 188 YGLIDKVIYKR 198
>gi|118444381|ref|YP_878863.1| ATP-dependent Clp protease proteolytic subunit [Clostridium novyi
NT]
gi|166201817|sp|A0Q2L1.1|CLPP_CLONN RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|118134837|gb|ABK61881.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
novyi NT]
Length = 195
Score = 258 bits (659), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 115/192 (59%), Positives = 157/192 (81%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
SL+P+V+E ++RGER+YDI+SRLLK+RII + +ND TA +VVAQLLFLE+E+P K I+
Sbjct: 2 SLVPVVVEQTNRGERSYDIYSRLLKDRIIFLGEEVNDVTASLVVAQLLFLEAEDPDKDIY 61
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
+Y+NSPGG +TAG+AIYDTMQYI+ ++TIC+G AASMG+ LL +G KG+R ALPNS IM
Sbjct: 62 LYINSPGGSITAGMAIYDTMQYIKPDVSTICIGMAASMGAFLLTAGAKGKRFALPNSEIM 121
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQP GG+ GQA D+ IH +I+++ D LN++ + TGQ +EVI+K+++RD FM EEAK
Sbjct: 122 IHQPLGGFQGQATDIGIHANRILKIKDKLNSILSERTGQPLEVIKKDVERDNFMEAEEAK 181
Query: 213 EFGIIDEVIDQR 224
E+G+ID+VI R
Sbjct: 182 EYGLIDDVITSR 193
>gi|146277488|ref|YP_001167647.1| ATP-dependent Clp protease proteolytic subunit [Rhodobacter
sphaeroides ATCC 17025]
gi|166214703|sp|A4WSH8.1|CLPP_RHOS5 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|145555729|gb|ABP70342.1| Endopeptidase Clp [Rhodobacter sphaeroides ATCC 17025]
Length = 210
Score = 258 bits (658), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 113/192 (58%), Positives = 156/192 (81%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E +SRGERAYDIFSR+LKERII ++GP++D + ++ AQLLFLE+ENPSK I
Sbjct: 11 TLVPMVVEQTSRGERAYDIFSRMLKERIIFLSGPVHDGMSSLICAQLLFLEAENPSKEIA 70
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
MY+NSPGG VT+GL+IYDTMQYIR ++T+ +GQAASMGSLLL +G KG R +LPNS +M
Sbjct: 71 MYINSPGGVVTSGLSIYDTMQYIRPKVSTLVIGQAASMGSLLLTAGEKGMRFSLPNSRVM 130
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
+HQPSGGY GQA D+ IH ++ ++ LN +Y KHTGQ ++ ++ ++RD FM+ E+AK
Sbjct: 131 VHQPSGGYQGQATDIMIHARETEKLKRRLNEIYVKHTGQDLDTVEAALERDNFMSAEDAK 190
Query: 213 EFGIIDEVIDQR 224
+G+IDE+++ R
Sbjct: 191 AWGLIDEILESR 202
>gi|387894467|ref|YP_006324764.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
fluorescens A506]
gi|423692342|ref|ZP_17666862.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
fluorescens SS101]
gi|213521159|gb|ACJ50516.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
fluorescens SS101]
gi|387164635|gb|AFJ59834.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
fluorescens A506]
gi|387998810|gb|EIK60139.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
fluorescens SS101]
Length = 211
Score = 258 bits (658), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 112/192 (58%), Positives = 155/192 (80%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
L+PMV+E S+RGERAYDI+SRLLKER+I + GP+ D A+++ AQLLFLE+ENP K IH+
Sbjct: 19 LVPMVVEQSARGERAYDIYSRLLKERVIFLVGPVEDYMANLICAQLLFLEAENPDKDIHL 78
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VTAG++IYDTMQ+I+ ++T C+GQA SMG+ LL +G +G+R LPNS +MI
Sbjct: 79 YINSPGGSVTAGMSIYDTMQFIKPNVSTTCIGQACSMGAFLLTAGAEGKRFCLPNSRVMI 138
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQP GG+ GQA D+ IH K+I+ + + LN L KH+G+++E I+++ +RD FM+ E AKE
Sbjct: 139 HQPLGGFQGQASDIEIHAKEILFIRERLNTLMAKHSGRTLEEIERDTNRDNFMSAEAAKE 198
Query: 214 FGIIDEVIDQRP 225
+G+ID VID+RP
Sbjct: 199 YGLIDAVIDKRP 210
>gi|170086161|ref|XP_001874304.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164651856|gb|EDR16096.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 243
Score = 258 bits (658), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 118/198 (59%), Positives = 158/198 (79%)
Query: 28 SARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENP 87
S S +L+P+VIE + RGER+YDIFSRLL+ER+I ++G I D + ++VAQLLFLE+E+
Sbjct: 38 SPPSANLVPIVIEQTGRGERSYDIFSRLLRERVIMLHGTIRDSDSTLIVAQLLFLEAEDS 97
Query: 88 SKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALP 147
+KPIH+Y+NSPGG VTAGLAIYDTMQY+ SPI+T LG AASMGSLLLA+G KG+R LP
Sbjct: 98 TKPIHLYINSPGGSVTAGLAIYDTMQYVSSPIHTYSLGLAASMGSLLLAAGEKGKRHCLP 157
Query: 148 NSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMT 207
N++IMIHQPSGG SGQA D+ IH K+I+R+ L +Y +H G+ E + ++RDY+MT
Sbjct: 158 NASIMIHQPSGGASGQASDIAIHAKEILRIRQVLTGIYQRHCGKDGESQAEALERDYYMT 217
Query: 208 PEEAKEFGIIDEVIDQRP 225
+EA EFGI+D ++++RP
Sbjct: 218 AQEAMEFGIVDGILEKRP 235
>gi|260575566|ref|ZP_05843564.1| Endopeptidase Clp [Rhodobacter sp. SW2]
gi|259022209|gb|EEW25507.1| Endopeptidase Clp [Rhodobacter sp. SW2]
Length = 210
Score = 258 bits (658), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 114/192 (59%), Positives = 156/192 (81%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E +SRGERAYDIFSR+LKERII ++GP++D + ++ AQLLFLE+ENP+K I
Sbjct: 11 TLVPMVVEQTSRGERAYDIFSRMLKERIIFLSGPVHDGMSALICAQLLFLEAENPTKEIS 70
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
MY+NSPGG VT+GL+IYDTMQYI+ I+T+ +GQAASMGSLLL +G KG R +LPNS +M
Sbjct: 71 MYINSPGGVVTSGLSIYDTMQYIKPRISTLVIGQAASMGSLLLTAGQKGMRFSLPNSRVM 130
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
+HQPSGGY GQA D+ IH ++ ++ D LN +Y KHTGQ +E + ++RD FM+ E+AK
Sbjct: 131 VHQPSGGYQGQATDIMIHAQETQKLKDRLNGIYVKHTGQPMEAVVAALERDNFMSAEDAK 190
Query: 213 EFGIIDEVIDQR 224
+G+IDE+++ R
Sbjct: 191 SWGLIDEIVESR 202
>gi|430003192|emb|CCF18977.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Rhizobium sp.]
Length = 210
Score = 258 bits (658), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 114/194 (58%), Positives = 156/194 (80%)
Query: 31 SFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKP 90
+ +L+PMV+E ++RGER+YDI+SRLLKERII + GP+ D A +V AQLLFLE+ENP K
Sbjct: 8 AMALVPMVVEQTNRGERSYDIYSRLLKERIIFLTGPVEDHMASLVCAQLLFLEAENPKKE 67
Query: 91 IHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNST 150
I +Y+NSPGG VTAG+AIYDTMQ+I+ ++T+C+GQAASMGSLLLA+G KG R A PNS
Sbjct: 68 IALYINSPGGVVTAGMAIYDTMQFIKPAVSTLCIGQAASMGSLLLAAGEKGMRFATPNSR 127
Query: 151 IMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEE 210
IM+HQPSGG+ GQA D+ H + I+++ LN +Y KHTG++ E ++K +DRD+FM +E
Sbjct: 128 IMVHQPSGGFQGQASDIERHARDILKMKRRLNEVYEKHTGRTYEEVEKTLDRDHFMDADE 187
Query: 211 AKEFGIIDEVIDQR 224
AKE+G+ID+++ R
Sbjct: 188 AKEWGVIDKILTSR 201
>gi|153871192|ref|ZP_02000426.1| Peptidase S14, ClpP [Beggiatoa sp. PS]
gi|152072341|gb|EDN69573.1| Peptidase S14, ClpP [Beggiatoa sp. PS]
Length = 228
Score = 258 bits (658), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 120/206 (58%), Positives = 159/206 (77%), Gaps = 1/206 (0%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
L+PMV+E S+RGERAYDI+SRLLKER+I + GP+ D TA++VVAQLLFLESENP K IH+
Sbjct: 22 LVPMVVEQSARGERAYDIYSRLLKERVIFLVGPVEDYTANLVVAQLLFLESENPEKDIHL 81
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG V+AGLAIYDTMQ+I+ ++T+C+GQAASMG+LLL+ G +R LP+S IMI
Sbjct: 82 YINSPGGSVSAGLAIYDTMQFIKPDVSTLCIGQAASMGALLLSGGADKKRYCLPHSRIMI 141
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQP GG+ GQA D+ IH ++I++V + LN + KH+GQ +E IQK+ +RD FM E A E
Sbjct: 142 HQPLGGFQGQATDIDIHAREILKVRERLNEILAKHSGQPLEKIQKDTERDNFMAAETAVE 201
Query: 214 FGIIDEVIDQRPMALVTDAVGREGKE 239
+G++D V+ R AL A + KE
Sbjct: 202 YGLVDAVLSTR-HALTAAATEEQTKE 226
>gi|402851379|ref|ZP_10899539.1| ATP-dependent Clp protease proteolytic subunit [Rhodovulum sp.
PH10]
gi|402498354|gb|EJW10106.1| ATP-dependent Clp protease proteolytic subunit [Rhodovulum sp.
PH10]
Length = 209
Score = 258 bits (658), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 117/192 (60%), Positives = 153/192 (79%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
L+PMV+E ++RGERAYDI+SRLLKERII + G + D + ++VAQLLFLE+ENP K I M
Sbjct: 12 LVPMVVEQTNRGERAYDIYSRLLKERIIFVTGVVEDGMSSLIVAQLLFLEAENPKKEIAM 71
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VT+GLAIYDTMQ+IR ++T+C GQAASMGSLLL +G K R ALPN+ IM+
Sbjct: 72 YINSPGGVVTSGLAIYDTMQFIRPAVSTLCTGQAASMGSLLLTAGHKDMRFALPNARIMV 131
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQPSGG+ GQA D+ IH ++I+ + LN +Y HTGQ I+ I++ ++RD F T E AKE
Sbjct: 132 HQPSGGFQGQATDIMIHAQEIINLRRRLNEIYVVHTGQEIKKIEEALERDQFFTAEGAKE 191
Query: 214 FGIIDEVIDQRP 225
FG+ID+VI++RP
Sbjct: 192 FGLIDKVIERRP 203
>gi|334128684|ref|ZP_08502565.1| ATP-dependent Clp protease, protease subunit [Centipeda periodontii
DSM 2778]
gi|333386421|gb|EGK57635.1| ATP-dependent Clp protease, protease subunit [Centipeda periodontii
DSM 2778]
Length = 203
Score = 258 bits (658), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 122/193 (63%), Positives = 155/193 (80%), Gaps = 1/193 (0%)
Query: 35 IPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHMY 94
+PMV+E+SSRGERAYDI+SRLLKERII + GPI+D A+VVVAQLLFLESE+P K IH+Y
Sbjct: 5 VPMVVENSSRGERAYDIYSRLLKERIIFLGGPIDDSVANVVVAQLLFLESEDPDKDIHLY 64
Query: 95 LNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMIH 154
+NSPGG VTAGLAIYDTMQYI+ ++TIC+GQAASMGS+LL +G G+R ALP++ IMIH
Sbjct: 65 INSPGGVVTAGLAIYDTMQYIKPDVSTICIGQAASMGSILLTAGAAGKRYALPHARIMIH 124
Query: 155 QPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKEF 214
QP GG GQ+ D+ I K+I+R+ + N + +HTGQ E I + +RD FM+ EEAKE+
Sbjct: 125 QPLGGAQGQSTDIQIQAKEILRLREVGNNILARHTGQDPEKINVDTERDNFMSAEEAKEY 184
Query: 215 GIIDEVIDQRPMA 227
G+IDEV+ RP A
Sbjct: 185 GLIDEVV-TRPKA 196
>gi|15966977|ref|NP_387330.1| ATP-dependent Clp protease proteolytic subunit [Sinorhizobium
meliloti 1021]
gi|334317923|ref|YP_004550542.1| ATP-dependent Clp protease proteolytic subunit [Sinorhizobium
meliloti AK83]
gi|384531048|ref|YP_005715136.1| ATP-dependent Clp protease proteolytic subunit [Sinorhizobium
meliloti BL225C]
gi|384537763|ref|YP_005721848.1| ATP-dependent Clp protease, proteolytic subunit [Sinorhizobium
meliloti SM11]
gi|407722234|ref|YP_006841896.1| ATP-dependent Clp protease proteolytic subunit 1 [Sinorhizobium
meliloti Rm41]
gi|433614997|ref|YP_007191795.1| Protease subunit of ATP-dependent Clp protease [Sinorhizobium
meliloti GR4]
gi|18202305|sp|P58277.1|CLPP1_RHIME RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|15076250|emb|CAC47803.1| Probable ATP-dependent CLP protease proteolytic subunit
[Sinorhizobium meliloti 1021]
gi|333813224|gb|AEG05893.1| ATP-dependent Clp protease proteolytic subunit [Sinorhizobium
meliloti BL225C]
gi|334096917|gb|AEG54928.1| ATP-dependent Clp protease proteolytic subunit [Sinorhizobium
meliloti AK83]
gi|336034655|gb|AEH80587.1| ATP-dependent Clp protease, proteolytic subunit [Sinorhizobium
meliloti SM11]
gi|407320466|emb|CCM69070.1| ATP-dependent Clp protease proteolytic subunit 1 [Sinorhizobium
meliloti Rm41]
gi|429553187|gb|AGA08196.1| Protease subunit of ATP-dependent Clp protease [Sinorhizobium
meliloti GR4]
Length = 205
Score = 258 bits (658), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 113/202 (55%), Positives = 155/202 (76%)
Query: 31 SFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKP 90
+ L+PMV+E SSRGER++DI+SRLL+ERII +NG +ND + +V AQLLFLE+E+P KP
Sbjct: 4 AMQLVPMVVEQSSRGERSFDIYSRLLRERIIFLNGEVNDAVSALVCAQLLFLEAESPKKP 63
Query: 91 IHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNST 150
I +Y+NSPGG VT+G A+YDTM+YIR+P++T+C+G A SMGS LL +G GER ALPN++
Sbjct: 64 IQLYINSPGGVVTSGFAMYDTMRYIRAPVHTLCMGTARSMGSFLLMAGEAGERTALPNAS 123
Query: 151 IMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEE 210
I++HQPSGG+ GQA DM IH ++I R + LY +H G++ E ++ MDRD FMT EE
Sbjct: 124 ILVHQPSGGFQGQASDMLIHAEEIRRTKHRMTRLYAEHCGRTYEEFERAMDRDRFMTAEE 183
Query: 211 AKEFGIIDEVIDQRPMALVTDA 232
A E+G+ID +I +R + DA
Sbjct: 184 ALEWGLIDRIITEREIGAERDA 205
>gi|188585728|ref|YP_001917273.1| ATP-dependent Clp protease proteolytic subunit ClpP [Natranaerobius
thermophilus JW/NM-WN-LF]
gi|259585960|sp|B2A158.1|CLPP_NATTJ RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|179350415|gb|ACB84685.1| ATP-dependent Clp protease proteolytic subunit ClpP [Natranaerobius
thermophilus JW/NM-WN-LF]
Length = 197
Score = 258 bits (658), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 117/194 (60%), Positives = 156/194 (80%)
Query: 32 FSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPI 91
+LIPMVIE ++RGER+YDI+SRLLK+RII I INDD A+ V+AQ+LFLESE+P K I
Sbjct: 1 MNLIPMVIEQTNRGERSYDIYSRLLKDRIIFIGTGINDDIANSVIAQMLFLESEDPDKDI 60
Query: 92 HMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTI 151
H+Y+NSPGG V AGLAIYDTMQYIRS ++TIC+G AASMG++LLA+G +G+R LPNS I
Sbjct: 61 HLYINSPGGHVHAGLAIYDTMQYIRSDVSTICVGMAASMGAVLLAAGNEGKRFCLPNSRI 120
Query: 152 MIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEA 211
M+HQP GG GQA D+ IH ++I++ + LN + HTGQ +E I K+ DRD+FM+ EEA
Sbjct: 121 MLHQPMGGAQGQAADVEIHAREIMKTKERLNQILAHHTGQPVEQISKDTDRDFFMSSEEA 180
Query: 212 KEFGIIDEVIDQRP 225
+++G+ID+V+ + P
Sbjct: 181 QKYGVIDDVLKRPP 194
>gi|70731346|ref|YP_261087.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
protegens Pf-5]
gi|110816462|sp|Q4K9J6.1|CLPP_PSEF5 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|68345645|gb|AAY93251.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
protegens Pf-5]
Length = 211
Score = 258 bits (658), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 112/192 (58%), Positives = 155/192 (80%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
L+PMV+E S+RGERAYDI+SRLLKER+I + GP+ D A+++ AQLLFLE+ENP K IH+
Sbjct: 19 LVPMVVEQSARGERAYDIYSRLLKERVIFLVGPVEDYMANLICAQLLFLEAENPDKDIHL 78
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VTAG++IYDTMQ+I+ ++T C+GQA SMG+ LL +G G+R LPNS +MI
Sbjct: 79 YINSPGGSVTAGMSIYDTMQFIKPNVSTTCIGQACSMGAFLLTAGAPGKRFCLPNSRVMI 138
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQP GG+ GQA D+ IH K+I+ + + LN L KH+G+++E I+++ +RD FM+ E A+E
Sbjct: 139 HQPLGGFQGQASDIEIHAKEILFIRERLNTLMAKHSGRTLEEIERDTNRDNFMSAEAARE 198
Query: 214 FGIIDEVIDQRP 225
+G+IDEVI+QRP
Sbjct: 199 YGLIDEVINQRP 210
>gi|167032910|ref|YP_001668141.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas putida
GB-1]
gi|189082463|sp|B0KJG6.1|CLPP_PSEPG RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|166859398|gb|ABY97805.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
putida GB-1]
Length = 213
Score = 258 bits (658), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 114/194 (58%), Positives = 152/194 (78%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
L+PMVIE S+RGERAYDI+SRLLKER+I + GP+ D A++VVAQ+LFLE+ENP K IH+
Sbjct: 19 LVPMVIEQSARGERAYDIYSRLLKERVIFLVGPVEDYMANLVVAQMLFLEAENPDKDIHL 78
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VTAG++IYDTMQ+I+ ++TIC+GQA SMG+ LL +G KG+R LPNS +MI
Sbjct: 79 YINSPGGSVTAGMSIYDTMQFIKPDVSTICIGQACSMGAFLLTAGAKGKRHCLPNSRVMI 138
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQP GG+ GQA D+ IH ++I+ + LN L HTGQ +E IQ++ +RD FM+ A E
Sbjct: 139 HQPLGGFQGQATDIQIHAQEILSIKARLNELLAYHTGQDLETIQRDTERDNFMSASRAAE 198
Query: 214 FGIIDEVIDQRPMA 227
+G+ID V D+R +A
Sbjct: 199 YGLIDSVYDKRQLA 212
>gi|429728764|ref|ZP_19263468.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Peptostreptococcus anaerobius VPI 4330]
gi|429147739|gb|EKX90761.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Peptostreptococcus anaerobius VPI 4330]
Length = 217
Score = 258 bits (658), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 117/218 (53%), Positives = 162/218 (74%), Gaps = 4/218 (1%)
Query: 7 LLSRTSMATKFLQLSKPSAQISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGP 66
+L TS F++ + + +L+P V+E RGER+YDI+SRLLK+RII +
Sbjct: 3 VLKTTSYYVVFIR----KKRFGGDNMALVPYVVEQDGRGERSYDIYSRLLKDRIIFLGDE 58
Query: 67 INDDTAHVVVAQLLFLESENPSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQ 126
+ND TA +VVAQ+LFLE+++P K IH+Y+NSPGG VTAG+AIYDTMQYI++ ++TIC+G
Sbjct: 59 VNDQTASLVVAQMLFLEADDPDKDIHLYINSPGGSVTAGMAIYDTMQYIKADVSTICVGM 118
Query: 127 AASMGSLLLASGTKGERRALPNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYC 186
AASMG+ LLA+G KG+R ALPNST+MIHQP GG GQA D+ IHTK ++ + + LN +
Sbjct: 119 AASMGAFLLAAGAKGKRYALPNSTVMIHQPLGGTRGQATDIEIHTKYLLSIKEKLNKILA 178
Query: 187 KHTGQSIEVIQKNMDRDYFMTPEEAKEFGIIDEVIDQR 224
+ TGQ +E ++ N +RD FMT +EA++FG+IDEVI R
Sbjct: 179 ERTGQDLETVKANTERDNFMTADEARDFGLIDEVIAGR 216
>gi|456063263|ref|YP_007502233.1| ATP-dependent Clp protease, proteolytic subunit ClpP [beta
proteobacterium CB]
gi|455440560|gb|AGG33498.1| ATP-dependent Clp protease, proteolytic subunit ClpP [beta
proteobacterium CB]
Length = 209
Score = 257 bits (657), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 116/202 (57%), Positives = 157/202 (77%)
Query: 24 SAQISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLE 83
S + + L+PMVIE S RGERAYDI+SRLL+ER++ + G +ND TA++V+AQLLFLE
Sbjct: 8 SENLEPKGLGLVPMVIETSGRGERAYDIYSRLLRERVVFLVGEVNDQTANLVIAQLLFLE 67
Query: 84 SENPSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGER 143
SENP K I +Y+NSPGG V+AGLAIYDTMQ+I+ ++T+C+G AASMG+ LL +G KG+R
Sbjct: 68 SENPDKEISLYINSPGGSVSAGLAIYDTMQFIKPHVSTLCMGMAASMGAFLLCAGEKGKR 127
Query: 144 RALPNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRD 203
ALPNS +MIHQP GG GQA D+ I ++I+ + + LN + TGQSIE I K+ DRD
Sbjct: 128 YALPNSRVMIHQPLGGARGQASDIEIQAREILYLRERLNKILADRTGQSIETIAKDTDRD 187
Query: 204 YFMTPEEAKEFGIIDEVIDQRP 225
FM+ ++A+E+G+ID+VID+RP
Sbjct: 188 NFMSADQAQEYGLIDKVIDKRP 209
>gi|255589435|ref|XP_002534960.1| ATP-dependent Clp protease proteolytic subunit, putative [Ricinus
communis]
gi|223524291|gb|EEF27423.1| ATP-dependent Clp protease proteolytic subunit, putative [Ricinus
communis]
Length = 435
Score = 257 bits (657), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 114/190 (60%), Positives = 151/190 (79%)
Query: 35 IPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHMY 94
IPMVIE S RGER+YDI+SRLLKER+I + GP+ND TA++VVAQLLFLE+ENP K I +Y
Sbjct: 243 IPMVIEQSGRGERSYDIYSRLLKERVIFLVGPVNDMTANLVVAQLLFLEAENPDKDISLY 302
Query: 95 LNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMIH 154
+NSPGG VTAG++IYDTMQ+I+ ++T+C+GQAASMG+ LL +G KG+R LPNS +MIH
Sbjct: 303 INSPGGSVTAGMSIYDTMQFIKPDVSTLCIGQAASMGAFLLTAGAKGKRFCLPNSRVMIH 362
Query: 155 QPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKEF 214
QP GG+ GQA D+ IH K+I+ + D LN + HTGQ+I+ I + DRD FM+ + AK +
Sbjct: 363 QPLGGFQGQASDIEIHAKEILYLKDKLNGIMAHHTGQNIDTIANDTDRDNFMSADAAKAY 422
Query: 215 GIIDEVIDQR 224
G++D+VI R
Sbjct: 423 GLVDQVIAAR 432
>gi|320354136|ref|YP_004195475.1| ATP-dependent Clp protease proteolytic subunit ClpP [Desulfobulbus
propionicus DSM 2032]
gi|320122638|gb|ADW18184.1| ATP-dependent Clp protease proteolytic subunit ClpP [Desulfobulbus
propionicus DSM 2032]
Length = 200
Score = 257 bits (657), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 119/193 (61%), Positives = 152/193 (78%)
Query: 32 FSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPI 91
+L+PMV+E S RGERA+DI+SRLLKERII + +NDD A +VVAQLLFLE+E+P K I
Sbjct: 1 MNLVPMVVEQSPRGERAFDIYSRLLKERIIFLGTQVNDDVASLVVAQLLFLEAEDPDKDI 60
Query: 92 HMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTI 151
Y+NSPGG VTAG+AIYDTMQYIR + T+C+GQAASMG+LLLASG G+R ALPNS I
Sbjct: 61 TFYINSPGGSVTAGMAIYDTMQYIRCDVATLCMGQAASMGALLLASGAAGKRFALPNSRI 120
Query: 152 MIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEA 211
MIHQP GGY GQA D+ IH ++I+R+ LN + +HTG+S++ IQ + +RD FM+ EA
Sbjct: 121 MIHQPMGGYQGQATDIDIHAREILRMRHDLNTILARHTGKSMKKIQADTERDNFMSATEA 180
Query: 212 KEFGIIDEVIDQR 224
E+GIID+V+ R
Sbjct: 181 CEYGIIDKVLTNR 193
>gi|218672149|ref|ZP_03521818.1| ATP-dependent Clp protease proteolytic subunit [Rhizobium etli
GR56]
Length = 203
Score = 257 bits (657), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 113/194 (58%), Positives = 154/194 (79%)
Query: 31 SFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKP 90
+ L+PMVIE SSRGER++DI+SRLL+ERII +NG +ND + +V AQLLFLE+ENP KP
Sbjct: 4 AMQLVPMVIEQSSRGERSFDIYSRLLRERIIFLNGEVNDTVSALVCAQLLFLEAENPKKP 63
Query: 91 IHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNST 150
I++Y+NSPGG VT+GLA+YDTM++IR+P++T+C+G A SMGS LL +G GER ALPN++
Sbjct: 64 INLYINSPGGVVTSGLAMYDTMRFIRAPVHTLCMGTARSMGSFLLMAGEAGERAALPNAS 123
Query: 151 IMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEE 210
I+IHQPSGG+ GQA DM IH ++I++ + LY +H G+S E ++ MDRD FMT EE
Sbjct: 124 ILIHQPSGGFQGQASDMLIHAEEILKTKQRMTRLYAEHCGRSYEDFERGMDRDRFMTAEE 183
Query: 211 AKEFGIIDEVIDQR 224
A E+G+ID ++ R
Sbjct: 184 ALEWGLIDRILKVR 197
>gi|238650581|ref|YP_002916433.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia
peacockii str. Rustic]
gi|259585964|sp|C4K1D4.1|CLPP_RICPU RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|238624679|gb|ACR47385.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia
peacockii str. Rustic]
Length = 201
Score = 257 bits (657), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 117/193 (60%), Positives = 153/193 (79%)
Query: 32 FSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPI 91
S +P+V+E +SRGERAYDI+SRLLKERII + + D A+++VAQLLFLE+ENP K I
Sbjct: 1 MSYVPIVVEPTSRGERAYDIYSRLLKERIIFVCSTVEDHMANLIVAQLLFLEAENPKKDI 60
Query: 92 HMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTI 151
+MY+NSPGG VTAGLAIYDTMQYI+ + T+C+GQA SMGSLLL G KG R +LP+S I
Sbjct: 61 YMYINSPGGVVTAGLAIYDTMQYIKPKVATLCIGQACSMGSLLLCGGEKGMRYSLPHSRI 120
Query: 152 MIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEA 211
MIHQPSGGY GQA D+ IH ++ +++ LN LY KHT Q ++ I+K+M+RD FM+PEEA
Sbjct: 121 MIHQPSGGYKGQATDIEIHAQETLKIKRLLNELYSKHTEQELKHIEKSMERDNFMSPEEA 180
Query: 212 KEFGIIDEVIDQR 224
K+FG++D ++ R
Sbjct: 181 KKFGLVDNIMSSR 193
>gi|84686590|ref|ZP_01014483.1| Protease subunit of ATP-dependent Clp protease [Maritimibacter
alkaliphilus HTCC2654]
gi|84665503|gb|EAQ11980.1| Protease subunit of ATP-dependent Clp protease [Rhodobacterales
bacterium HTCC2654]
Length = 193
Score = 257 bits (657), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 115/188 (61%), Positives = 153/188 (81%)
Query: 37 MVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHMYLN 96
MV+E +SRGERAYDIFSRLLKERII +NGP++D + ++ AQLLFLE+ENPSK I MY+N
Sbjct: 1 MVVEQTSRGERAYDIFSRLLKERIIFLNGPVHDGMSSLICAQLLFLEAENPSKEIAMYIN 60
Query: 97 SPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMIHQP 156
SPGG VT+GL+IYDTMQYIR ++T+ +GQAASMGSLLL +G G R +LPNS IM+HQP
Sbjct: 61 SPGGVVTSGLSIYDTMQYIRPKVSTLVIGQAASMGSLLLTAGAPGMRFSLPNSRIMVHQP 120
Query: 157 SGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKEFGI 216
SGGY GQA D+ IH ++ ++ D LN++Y KHTGQ ++ + ++RD FM PE+AK++G+
Sbjct: 121 SGGYQGQATDIMIHAQETQKLKDRLNSIYVKHTGQKLKAVVDALERDNFMDPEQAKDWGL 180
Query: 217 IDEVIDQR 224
IDE+++ R
Sbjct: 181 IDEILESR 188
>gi|429462878|ref|YP_007184341.1| ATP-dependent Clp protease proteolytic subunit [Candidatus
Kinetoplastibacterium crithidii (ex Angomonas deanei
ATCC 30255)]
gi|451811375|ref|YP_007447830.1| ATP-dependent Clp protease, protease subunit [Candidatus
Kinetoplastibacterium crithidii TCC036E]
gi|429338392|gb|AFZ82815.1| ATP-dependent Clp protease proteolytic subunit [Candidatus
Kinetoplastibacterium crithidii (ex Angomonas deanei
ATCC 30255)]
gi|451776533|gb|AGF47532.1| ATP-dependent Clp protease, protease subunit [Candidatus
Kinetoplastibacterium crithidii TCC036E]
Length = 203
Score = 257 bits (657), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 117/199 (58%), Positives = 159/199 (79%)
Query: 26 QISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESE 85
Q SF+ +PMV+E+S +GERAYDI+SRLLKERII + GPI+D+ A++VVAQ+LFLESE
Sbjct: 5 QTDDFSFNYVPMVVENSGKGERAYDIYSRLLKERIIFLVGPIDDNMANLVVAQMLFLESE 64
Query: 86 NPSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRA 145
NP K IH+Y+NSPGG V AGLAI+DTM++I+ ++T+C G AASMG+ LL++G KG+R +
Sbjct: 65 NPKKDIHLYINSPGGSVYAGLAIFDTMKFIKPDVSTMCTGIAASMGAFLLSAGEKGKRFS 124
Query: 146 LPNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYF 205
LP+S+IMIHQPSGG GQ+ D+ IH K+I+R+ D LN++ +TGQSIE I + DRDYF
Sbjct: 125 LPSSSIMIHQPSGGVKGQSSDIQIHAKEILRLRDMLNSIMAYNTGQSIETIIGDTDRDYF 184
Query: 206 MTPEEAKEFGIIDEVIDQR 224
M+ EA +G+ID+V+ R
Sbjct: 185 MSANEALSYGLIDKVLTNR 203
>gi|417842395|ref|ZP_12488486.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
haemolyticus M19501]
gi|341947267|gb|EGT73935.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
haemolyticus M19501]
Length = 193
Score = 257 bits (657), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 115/192 (59%), Positives = 156/192 (81%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
S+IPMV+E +SRGER+YDI+SRLLKER+I ++G + D A+++VAQLLFLESE+P+K I+
Sbjct: 2 SVIPMVVEQTSRGERSYDIYSRLLKERVIFLSGEVEDRMANLIVAQLLFLESEDPTKDIN 61
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
+Y+NSPGG VTAG+AIYDTMQ+I+ I T+C+GQA SMG+ LLA GT G+R ALPN+ +M
Sbjct: 62 IYINSPGGSVTAGMAIYDTMQFIKPDIRTLCIGQACSMGAFLLAGGTAGKRAALPNARVM 121
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQP GG+ GQA D+ IH ++I+++ LN HTGQSIE I+K+ DRD FM+ EEAK
Sbjct: 122 IHQPLGGFRGQASDIQIHAQEILKIKQTLNDRLAFHTGQSIERIEKDTDRDNFMSAEEAK 181
Query: 213 EFGIIDEVIDQR 224
+G++DEV+ +R
Sbjct: 182 AYGLVDEVLIKR 193
>gi|339021745|ref|ZP_08645737.1| Clp protease proteolytic subunit ClpP [Acetobacter tropicalis NBRC
101654]
gi|338751241|dbj|GAA09041.1| Clp protease proteolytic subunit ClpP [Acetobacter tropicalis NBRC
101654]
Length = 234
Score = 257 bits (657), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 117/197 (59%), Positives = 156/197 (79%)
Query: 31 SFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKP 90
S +L+PMV+E +SRGERA+DI+SRLL+ERII + GP+ D A ++ AQLL+LES NP+K
Sbjct: 27 SNALVPMVVEQTSRGERAFDIYSRLLQERIIFLTGPVYDQVASLISAQLLYLESVNPTKE 86
Query: 91 IHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNST 150
I Y+NSPGG V+AGLAIYDTMQYIRSP++T+C+GQAASMGSLLLA G KG R ALPN+
Sbjct: 87 ISFYINSPGGVVSAGLAIYDTMQYIRSPVSTVCIGQAASMGSLLLAGGEKGHRYALPNAR 146
Query: 151 IMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEE 210
+M+HQPSGG GQA D+ I K+I+ + LN +Y +HTGQ++E I++ ++RD +M+ EE
Sbjct: 147 VMVHQPSGGAQGQASDIEIQAKEILIIRQRLNEIYREHTGQTLEDIEQKLERDSYMSAEE 206
Query: 211 AKEFGIIDEVIDQRPMA 227
A+ FGI+D+VI A
Sbjct: 207 AQSFGIVDKVISHHKAA 223
>gi|337755601|ref|YP_004648112.1| ATP-dependent Clp protease proteolytic subunit [Francisella sp.
TX077308]
gi|336447206|gb|AEI36512.1| ATP-dependent Clp protease proteolytic subunit [Francisella sp.
TX077308]
Length = 201
Score = 257 bits (657), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 115/192 (59%), Positives = 152/192 (79%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+P V+E ++ GERA+DI+SRLLKERI+ +NG +ND +A++V+AQLLFLESE+P K I+
Sbjct: 5 NLVPTVVEKTAGGERAFDIYSRLLKERIVFLNGEVNDQSANLVIAQLLFLESEDPDKDIY 64
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
Y+NSPGG VTAG+ +YDTMQ+I+ +NTIC+G AASMGSLLLA G KG+R +LP+S IM
Sbjct: 65 FYINSPGGMVTAGMGVYDTMQFIKPDVNTICIGLAASMGSLLLAGGAKGKRYSLPSSQIM 124
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQP GG+ GQA D+ IH K I+R+ D LN + HT Q +E I ++ DRD FM EEAK
Sbjct: 125 IHQPLGGFRGQASDIEIHAKNILRIKDRLNKVLAYHTSQDLETIVRDTDRDNFMMAEEAK 184
Query: 213 EFGIIDEVIDQR 224
E+G+ID VI+ R
Sbjct: 185 EYGLIDHVIESR 196
>gi|398938375|ref|ZP_10667778.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
sp. GM41(2012)]
gi|398165923|gb|EJM54033.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
sp. GM41(2012)]
Length = 211
Score = 257 bits (657), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 112/192 (58%), Positives = 153/192 (79%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
L+PMV+E S+RGERAYDI+SRLLKER+I + GP+ D A+++ AQLLFLE+ENP K IH+
Sbjct: 19 LVPMVVEQSARGERAYDIYSRLLKERVIFLVGPVEDYMANLICAQLLFLEAENPDKDIHL 78
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VTAG++IYDTMQ+I+ ++T C+GQA SMG+ LL +G G+R LPNS +MI
Sbjct: 79 YINSPGGSVTAGMSIYDTMQFIKPNVSTTCIGQACSMGAFLLTAGAAGKRFCLPNSRVMI 138
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQP GG+ GQA D+ IH K+I+ + + LN L KH+G ++E I+++ +RD FM+ E A+E
Sbjct: 139 HQPLGGFQGQASDIEIHAKEILFIRERLNTLMAKHSGHTLEEIERDTNRDNFMSAEAARE 198
Query: 214 FGIIDEVIDQRP 225
+G+IDEVI QRP
Sbjct: 199 YGLIDEVISQRP 210
>gi|237653230|ref|YP_002889544.1| ATP-dependent Clp protease proteolytic subunit [Thauera sp. MZ1T]
gi|237624477|gb|ACR01167.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thauera sp.
MZ1T]
Length = 212
Score = 257 bits (657), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 114/193 (59%), Positives = 154/193 (79%)
Query: 32 FSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPI 91
L+PMV+E S RGERAYDI+SRLLKER++ + GP+ND TA+++VAQLLFLESENP K I
Sbjct: 17 LGLVPMVVEQSGRGERAYDIYSRLLKERVVFLVGPVNDVTANLIVAQLLFLESENPDKDI 76
Query: 92 HMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTI 151
+ Y+NSPGG VTAG+AIYDTMQ+I+ ++T+C+GQAASMG+ LLA+G KG+R LPNS +
Sbjct: 77 YFYINSPGGSVTAGMAIYDTMQFIKPNVSTLCIGQAASMGAFLLAAGEKGKRFILPNSRV 136
Query: 152 MIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEA 211
MIHQP GG+ GQA D+ IH ++I+ + LN + KHTGQ++E I+K+ DRD FM+ A
Sbjct: 137 MIHQPLGGFQGQASDIEIHAREILYLRSRLNDMLSKHTGQALERIEKDTDRDNFMSATAA 196
Query: 212 KEFGIIDEVIDQR 224
E+G++D+V+ R
Sbjct: 197 VEYGLVDKVLTSR 209
>gi|332186782|ref|ZP_08388524.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Sphingomonas
sp. S17]
gi|332013115|gb|EGI55178.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Sphingomonas
sp. S17]
Length = 229
Score = 257 bits (657), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 119/193 (61%), Positives = 153/193 (79%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
L+P+VIE S+RGER++DIFSRLL+ERII + G + D A ++ AQLLFLESENP K I+M
Sbjct: 28 LVPIVIEQSNRGERSFDIFSRLLRERIIFVTGGVEDGMASLICAQLLFLESENPKKDIYM 87
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VTAG+AI+DTMQYIR + T+C+GQAASMGS LLA+G G R A NS IMI
Sbjct: 88 YINSPGGVVTAGMAIHDTMQYIRPRVGTLCIGQAASMGSFLLAAGEPGMRVATTNSRIMI 147
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQPSGG G A D+ I ++I+R+ LN+LY K+TG+ +E I++ MDRD FM+ EEAKE
Sbjct: 148 HQPSGGAQGMAADIEIQAREILRMRHFLNSLYAKYTGKPLEEIERAMDRDKFMSSEEAKE 207
Query: 214 FGIIDEVIDQRPM 226
FG+ID+V D+RP+
Sbjct: 208 FGLIDQVFDKRPV 220
>gi|319789118|ref|YP_004150751.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermovibrio
ammonificans HB-1]
gi|317113620|gb|ADU96110.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermovibrio
ammonificans HB-1]
Length = 200
Score = 257 bits (657), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 114/191 (59%), Positives = 157/191 (82%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
+P+VIE + RGERAYDI+SRLLK+RI+ + PI+D A+++VAQLLFLE+E+P K I++
Sbjct: 8 FVPIVIEQTGRGERAYDIYSRLLKDRIVMLGTPIDDHVANLIVAQLLFLEAEDPEKDIYL 67
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VTAGLAIYDTMQYI+ + TIC+GQAASMG++LLA+G KG+R ALP++ IMI
Sbjct: 68 YINSPGGVVTAGLAIYDTMQYIKPDVVTICMGQAASMGAVLLAAGAKGKRFALPHARIMI 127
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQP GG+ GQA D+ IH K+I+R+ LN + KHT Q +E ++++ +RDYFM+ EEAKE
Sbjct: 128 HQPLGGFQGQATDIEIHAKEILRLKRMLNEILAKHTRQPVEKVEQDTERDYFMSAEEAKE 187
Query: 214 FGIIDEVIDQR 224
+G+ID+V+ +R
Sbjct: 188 YGLIDKVLTRR 198
>gi|88705172|ref|ZP_01102884.1| ATP-dependent Clp protease, proteolytic subunit [Congregibacter
litoralis KT71]
gi|88700867|gb|EAQ97974.1| ATP-dependent Clp protease, proteolytic subunit [Congregibacter
litoralis KT71]
Length = 206
Score = 257 bits (657), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 114/194 (58%), Positives = 155/194 (79%)
Query: 31 SFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKP 90
+ L+PMV+E +SRGER+YDI+SRLLKER++ + G + D A+++VAQLLFLESENP K
Sbjct: 7 ALGLVPMVVEQTSRGERSYDIYSRLLKERVVFVVGQVEDHMANLIVAQLLFLESENPDKD 66
Query: 91 IHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNST 150
IH+Y+NSPGG VTAGL+IYDTMQ+I+ I+T+CLGQAASMG+ LL+ GTKG+R LPN+
Sbjct: 67 IHLYINSPGGSVTAGLSIYDTMQFIKPDISTMCLGQAASMGAFLLSGGTKGKRYCLPNAR 126
Query: 151 IMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEE 210
MIHQPSGG GQA D+ I K+I+ + + LN L +HTGQ +EVI+++ +RD FM E+
Sbjct: 127 TMIHQPSGGAQGQATDIDIQAKEILIIRERLNRLMAEHTGQPLEVIERDTERDRFMDAEQ 186
Query: 211 AKEFGIIDEVIDQR 224
+KE+G++DEV+ R
Sbjct: 187 SKEYGLVDEVVTAR 200
>gi|398847904|ref|ZP_10604778.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
sp. GM84]
gi|398250862|gb|EJN36154.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
sp. GM84]
Length = 213
Score = 257 bits (657), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 114/193 (59%), Positives = 152/193 (78%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
L+PMVIE S+RGERAYDI+SRLLKER+I + GP+ D A++VVAQLLFLE+ENP K IH+
Sbjct: 19 LVPMVIEQSARGERAYDIYSRLLKERVIFLVGPVEDYMANLVVAQLLFLEAENPDKDIHL 78
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VTAG++IYDTMQ+I+ ++TIC+GQA SMG+ LLA+G KG+R LPNS +MI
Sbjct: 79 YINSPGGSVTAGMSIYDTMQFIKPDVSTICIGQACSMGAFLLAAGAKGKRHCLPNSRVMI 138
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQP GG+ GQA D+ IH ++I+ + LN L HTGQ +E I+++ +RD FM+ A E
Sbjct: 139 HQPLGGFQGQATDIEIHAQEILNIKARLNELLAYHTGQELETIKRDTERDNFMSASRAAE 198
Query: 214 FGIIDEVIDQRPM 226
+G+ID V D+R +
Sbjct: 199 YGLIDSVYDKRQL 211
>gi|238919011|ref|YP_002932525.1| ATP-dependent Clp protease, proteolytic subunit ClpP, putative
[Edwardsiella ictaluri 93-146]
gi|259585951|sp|C5BCJ6.1|CLPP_EDWI9 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|238868579|gb|ACR68290.1| ATP-dependent Clp protease, proteolytic subunit ClpP, putative
[Edwardsiella ictaluri 93-146]
Length = 206
Score = 257 bits (657), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 112/196 (57%), Positives = 156/196 (79%)
Query: 29 ARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPS 88
A +L+PMV+E +SRGER+YDIFSRLLKERII + G + D A+++VAQ+LFLE+ENP
Sbjct: 10 APHMALVPMVVEQTSRGERSYDIFSRLLKERIIFLTGQVEDHMANLIVAQMLFLEAENPE 69
Query: 89 KPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPN 148
K IH+Y+NSPGG +TAG++IYDTMQ+I+ ++TIC+GQA SMGS LLA+G +G+R LPN
Sbjct: 70 KDIHLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQACSMGSFLLAAGAQGKRFCLPN 129
Query: 149 STIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTP 208
S +MIHQP GG+ GQA D+ IH K+I+ + +N L KH+GQ IEVI+++ +RD FM+
Sbjct: 130 SRVMIHQPLGGFQGQATDIEIHAKEILSIKARMNTLMAKHSGQPIEVIERDTERDRFMSA 189
Query: 209 EEAKEFGIIDEVIDQR 224
++A E+G++D V+ QR
Sbjct: 190 QDAVEYGLVDAVLTQR 205
>gi|389795694|ref|ZP_10198808.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Rhodanobacter
fulvus Jip2]
gi|388430346|gb|EIL87520.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Rhodanobacter
fulvus Jip2]
Length = 209
Score = 257 bits (656), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 116/203 (57%), Positives = 157/203 (77%)
Query: 30 RSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSK 89
++ +L+PMV+E ++RGER+YDI+SRLLKER+I + G +ND A+++VAQ+LFLESENP K
Sbjct: 7 QNLNLVPMVVEQTARGERSYDIYSRLLKERVIFLVGEVNDQVANLLVAQMLFLESENPDK 66
Query: 90 PIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNS 149
I Y+NSPGG VTAGLAIYDTMQ+I+ ++T+C+GQA SMGS LL +G KG+R ALPNS
Sbjct: 67 DIQFYINSPGGAVTAGLAIYDTMQFIKPSVSTMCIGQACSMGSFLLMAGAKGKRYALPNS 126
Query: 150 TIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPE 209
+MIHQPSGG GQA D+ I ++I+ V + LN LY +HTGQ + I+ +M+RD FM
Sbjct: 127 RVMIHQPSGGAQGQATDIEIQAREILYVRERLNKLYAEHTGQPLAKIELDMERDRFMDAN 186
Query: 210 EAKEFGIIDEVIDQRPMALVTDA 232
EAK +G+IDEV+++R V A
Sbjct: 187 EAKTYGLIDEVLEKRAGETVKSA 209
>gi|418401471|ref|ZP_12974999.1| ATP-dependent Clp protease proteolytic subunit [Sinorhizobium
meliloti CCNWSX0020]
gi|359504579|gb|EHK77113.1| ATP-dependent Clp protease proteolytic subunit [Sinorhizobium
meliloti CCNWSX0020]
Length = 201
Score = 257 bits (656), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 113/199 (56%), Positives = 154/199 (77%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
L+PMV+E SSRGER++DI+SRLL+ERII +NG +ND + +V AQLLFLE+E+P KPI +
Sbjct: 3 LVPMVVEQSSRGERSFDIYSRLLRERIIFLNGEVNDAVSALVCAQLLFLEAESPKKPIQL 62
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VT+G A+YDTM+YIR+P++T+C+G A SMGS LL +G GER ALPN++I++
Sbjct: 63 YINSPGGVVTSGFAMYDTMRYIRAPVHTLCMGTARSMGSFLLMAGEAGERTALPNASILV 122
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQPSGG+ GQA DM IH ++I R + LY +H G++ E ++ MDRD FMT EEA E
Sbjct: 123 HQPSGGFQGQASDMLIHAEEIRRTKHRMTRLYAEHCGRTYEEFERAMDRDRFMTAEEALE 182
Query: 214 FGIIDEVIDQRPMALVTDA 232
+G+ID +I +R + DA
Sbjct: 183 WGLIDRIITEREIGAERDA 201
>gi|149186485|ref|ZP_01864797.1| ATP-dependent Clp protease [Erythrobacter sp. SD-21]
gi|148829712|gb|EDL48151.1| ATP-dependent Clp protease [Erythrobacter sp. SD-21]
Length = 241
Score = 257 bits (656), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 116/193 (60%), Positives = 153/193 (79%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+P V+E SSRGERA+DIFSRLL+ERI+ + G + D A ++VAQLLFLESENPSKPI
Sbjct: 28 ALVPTVVEQSSRGERAFDIFSRLLRERIVFVTGQVEDTMASLIVAQLLFLESENPSKPIS 87
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
MY+NSPGG VTAG+AI+DTMQYI+ ++T+C+GQAASMGS LLA+G G R ALPN+ IM
Sbjct: 88 MYINSPGGVVTAGMAIHDTMQYIKPRVSTVCIGQAASMGSFLLAAGEPGMRIALPNARIM 147
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
+HQPSGG G A D+ I ++I+R+ +N LY ++TG+S+ I+K MDRD F+ EEA
Sbjct: 148 VHQPSGGARGMASDIEIQAREILRIRKRMNDLYVQYTGKSLTEIEKAMDRDTFLEAEEAM 207
Query: 213 EFGIIDEVIDQRP 225
+FGI+D+V + RP
Sbjct: 208 KFGIVDKVFEARP 220
>gi|77165153|ref|YP_343678.1| endopeptidase Clp [Nitrosococcus oceani ATCC 19707]
gi|254434725|ref|ZP_05048233.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Nitrosococcus
oceani AFC27]
gi|110816460|sp|Q3JAJ8.1|CLPP_NITOC RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|76883467|gb|ABA58148.1| ATP-dependent Clp protease proteolytic subunit ClpP [Nitrosococcus
oceani ATCC 19707]
gi|207091058|gb|EDZ68329.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Nitrosococcus
oceani AFC27]
Length = 203
Score = 257 bits (656), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 113/192 (58%), Positives = 154/192 (80%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E ++RGERAYDI+SRLLKER++ + GP+ D A++VVAQLLFLESENP K IH
Sbjct: 7 TLVPMVVEQTARGERAYDIYSRLLKERVVFLVGPVEDHMANLVVAQLLFLESENPDKDIH 66
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
+Y+NSPGG VTAGL+IYDTMQ+I+ ++T+C+GQAASMG++LLA G G+R LP+S ++
Sbjct: 67 LYINSPGGSVTAGLSIYDTMQFIKPDVSTLCVGQAASMGAVLLAGGAGGKRHCLPHSRLL 126
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQP GG+ GQA D+ IH ++I+ V + LN + KHTGQ IE IQ + DRDYFM+ E+
Sbjct: 127 IHQPLGGFQGQATDIDIHAREILLVRERLNHILAKHTGQPIEKIQHDTDRDYFMSATESL 186
Query: 213 EFGIIDEVIDQR 224
+G++D V+ QR
Sbjct: 187 AYGLVDSVLKQR 198
>gi|372488837|ref|YP_005028402.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Dechlorosoma
suillum PS]
gi|359355390|gb|AEV26561.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Dechlorosoma
suillum PS]
Length = 213
Score = 257 bits (656), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 113/200 (56%), Positives = 157/200 (78%)
Query: 25 AQISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLES 84
+Q ++ L+PMV+E S RGERA+DI+SRLLKERI+ + GP+ND +A++VVAQLLFLE+
Sbjct: 7 SQWDPQALGLVPMVVEQSGRGERAFDIYSRLLKERIVFLVGPVNDASANLVVAQLLFLEA 66
Query: 85 ENPSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERR 144
+NP K I Y+NSPGG VTAGL+IYDTMQ+I+ ++T+C+GQAASMG+ LL +G KG+R
Sbjct: 67 DNPDKDIFFYINSPGGSVTAGLSIYDTMQFIKPDVSTLCMGQAASMGAFLLNAGAKGKRF 126
Query: 145 ALPNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDY 204
ALPNS +MIHQP GG+ GQA D+ IH K+I+ + LN + KH+GQ ++ I+K+ DRD
Sbjct: 127 ALPNSRVMIHQPMGGFQGQASDIEIHAKEILSLRAKLNEIMAKHSGQPVDRIEKDTDRDN 186
Query: 205 FMTPEEAKEFGIIDEVIDQR 224
F++ EA E+G+ID+V+ R
Sbjct: 187 FLSAAEAMEYGLIDKVLSSR 206
>gi|300114126|ref|YP_003760701.1| ATP-dependent Clp protease proteolytic subunit ClpP [Nitrosococcus
watsonii C-113]
gi|299540063|gb|ADJ28380.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Nitrosococcus
watsonii C-113]
Length = 203
Score = 257 bits (656), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 113/192 (58%), Positives = 154/192 (80%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E ++RGERAYDI+SRLLKER++ + GP+ D A++VVAQLLFLESENP K IH
Sbjct: 7 TLVPMVVEQTARGERAYDIYSRLLKERVVFLVGPVEDHMANLVVAQLLFLESENPDKDIH 66
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
+Y+NSPGG VTAGL+IYDTMQ+I+ ++T+C+GQAASMG++LLA G G+R LP+S ++
Sbjct: 67 LYINSPGGSVTAGLSIYDTMQFIKPDVSTLCVGQAASMGAVLLAGGAPGKRHCLPHSRLL 126
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQP GG+ GQA D+ IH ++I+ V + LN + KHTGQ IE IQ + DRDYFM+ E+
Sbjct: 127 IHQPLGGFQGQATDIDIHAREILLVRERLNHILAKHTGQPIEKIQHDTDRDYFMSATESL 186
Query: 213 EFGIIDEVIDQR 224
+G++D V+ QR
Sbjct: 187 AYGLVDSVLKQR 198
>gi|329850562|ref|ZP_08265407.1| clp protease family protein [Asticcacaulis biprosthecum C19]
gi|328840877|gb|EGF90448.1| clp protease family protein [Asticcacaulis biprosthecum C19]
Length = 208
Score = 257 bits (656), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 119/191 (62%), Positives = 146/191 (76%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
LIP VIE SSRGERAYDI+SR+LKERII + GP D A + AQLLFLESENP K I M
Sbjct: 12 LIPTVIEQSSRGERAYDIYSRMLKERIIFLTGPFEDGMATSICAQLLFLESENPKKEISM 71
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGGQVT+ LAIYDTMQYI+SP+ T+C+G AAS GSL+L +G G+R +LPNS IM+
Sbjct: 72 YINSPGGQVTSALAIYDTMQYIKSPVTTVCMGMAASAGSLILQAGENGQRISLPNSKIMV 131
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQPSGG G A D+ I + + + LN +Y KHTGQ EVI++ +DRD +MT EEAKE
Sbjct: 132 HQPSGGARGMASDIEIQAEDMRKTKKLLNEIYVKHTGQPYEVIERTLDRDRYMTAEEAKE 191
Query: 214 FGIIDEVIDQR 224
FG+ID V ++R
Sbjct: 192 FGLIDHVYEKR 202
>gi|402574685|ref|YP_006624028.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Desulfosporosinus meridiei DSM 13257]
gi|402255882|gb|AFQ46157.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Desulfosporosinus meridiei DSM 13257]
Length = 203
Score = 257 bits (656), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 115/197 (58%), Positives = 160/197 (81%), Gaps = 3/197 (1%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
L+PMV+E ++RGER+YDI+SRLLK+RII + G I+DD A++VVAQ+LFLE+E+P K I++
Sbjct: 4 LVPMVVEQTNRGERSYDIYSRLLKDRIIFLGGGIDDDVANLVVAQMLFLEAEDPEKDINL 63
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG +TAG+AIYDTMQYIRS + TIC+G AASMG+ LLASGTKG+R ALPNS ++I
Sbjct: 64 YINSPGGSITAGMAIYDTMQYIRSDVRTICIGMAASMGAFLLASGTKGKRVALPNSEVLI 123
Query: 154 HQP---SGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEE 210
HQP G SGQA ++ IH KQ++R +N + + TGQ IE ++K+ +RDY+MT EE
Sbjct: 124 HQPLIGGHGLSGQATEIEIHAKQLLRTKAKMNKILAERTGQPIEKVEKDTERDYYMTAEE 183
Query: 211 AKEFGIIDEVIDQRPMA 227
AKE+G++D+V+++ +A
Sbjct: 184 AKEYGLVDQVLEKLEVA 200
>gi|426408621|ref|YP_007028720.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas sp.
UW4]
gi|426266838|gb|AFY18915.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas sp.
UW4]
Length = 211
Score = 257 bits (656), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 111/192 (57%), Positives = 155/192 (80%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
L+PMV+E S+RGERAYDI+SRLLKER+I + GP+ D A+++ AQLLFLE+ENP K IH+
Sbjct: 19 LVPMVVEQSARGERAYDIYSRLLKERVIFLVGPVEDYMANLICAQLLFLEAENPDKDIHL 78
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VTAG++IYDTMQ+I+ ++T C+GQA SMG+ LL +G +G+R LPNS +MI
Sbjct: 79 YINSPGGSVTAGMSIYDTMQFIKPNVSTTCIGQACSMGAFLLTAGAQGKRYCLPNSRVMI 138
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQP GG+ GQA D+ IH K+I+ + + LN L KH+G+++E I+++ +RD FM+ + A+E
Sbjct: 139 HQPLGGFQGQASDIEIHAKEILFIRERLNTLMAKHSGRTLEEIERDTNRDNFMSADAARE 198
Query: 214 FGIIDEVIDQRP 225
+G+IDEVI QRP
Sbjct: 199 YGLIDEVISQRP 210
>gi|398879706|ref|ZP_10634794.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
sp. GM67]
gi|398886634|ref|ZP_10641501.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
sp. GM60]
gi|398188905|gb|EJM76194.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
sp. GM60]
gi|398195850|gb|EJM82877.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
sp. GM67]
Length = 211
Score = 257 bits (656), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 112/192 (58%), Positives = 154/192 (80%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
L+PMV+E S+RGERAYDI+SRLLKER+I + GP+ D A+++ AQLLFLE+ENP K IH+
Sbjct: 19 LVPMVVEQSARGERAYDIYSRLLKERVIFLVGPVEDYMANLICAQLLFLEAENPDKDIHL 78
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VTAG++IYDTMQ+I+ ++T C+GQA SMG+ LL +G G+R LPNS +MI
Sbjct: 79 YINSPGGSVTAGMSIYDTMQFIKPNVSTTCIGQACSMGAFLLTAGAPGKRYCLPNSRVMI 138
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQP GG+ GQA D+ IH K+I+ + + LN L KH+G+++E I+++ +RD FM+ E A+E
Sbjct: 139 HQPLGGFQGQASDIEIHAKEILFIRERLNTLMAKHSGRTLEEIERDTNRDNFMSAEAARE 198
Query: 214 FGIIDEVIDQRP 225
+G+IDEVI QRP
Sbjct: 199 YGLIDEVITQRP 210
>gi|187935559|ref|YP_001887076.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
botulinum B str. Eklund 17B]
gi|226706444|sp|B2TPB9.1|CLPP_CLOBB RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|187723712|gb|ACD24933.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
botulinum B str. Eklund 17B]
Length = 199
Score = 257 bits (656), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 111/190 (58%), Positives = 158/190 (83%)
Query: 32 FSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPI 91
SL+PMV+E +SRGER+YDIFSRLLKERII ++G +NDD+++++V+QLLFLESE+P K I
Sbjct: 1 MSLVPMVVEQTSRGERSYDIFSRLLKERIIMLSGEVNDDSSNLIVSQLLFLESEDPDKDI 60
Query: 92 HMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTI 151
+Y+NSPGG +TAG+AIYDTMQYI+ ++TIC+G AASMG+ LL+SG G+R ALPN+ I
Sbjct: 61 SIYINSPGGSITAGMAIYDTMQYIKPDVSTICVGMAASMGAFLLSSGANGKRYALPNAEI 120
Query: 152 MIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEA 211
MIHQP GG+ GQA D+ IH +I+++ ++LN + ++T Q +EVI+ +++RD FMT +EA
Sbjct: 121 MIHQPLGGFQGQATDIQIHANRILKIKESLNKILSENTNQPLEVIEADVERDNFMTADEA 180
Query: 212 KEFGIIDEVI 221
K +G++D+VI
Sbjct: 181 KTYGLVDKVI 190
>gi|154247518|ref|YP_001418476.1| endopeptidase Clp [Xanthobacter autotrophicus Py2]
gi|226706559|sp|A7ILC6.1|CLPP_XANP2 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|154161603|gb|ABS68819.1| Endopeptidase Clp [Xanthobacter autotrophicus Py2]
Length = 211
Score = 257 bits (656), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 115/192 (59%), Positives = 153/192 (79%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
LIPMV+E ++RGER+YDIFSRLLKERII + GP+ D + + VAQLLFLE++NP K I M
Sbjct: 12 LIPMVVEQTNRGERSYDIFSRLLKERIIFLTGPVEDGMSTLAVAQLLFLEADNPKKEISM 71
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VT+GLAIYDTMQ+I+ ++T+C+GQAASMGSLLL +G K R ALPN+ IM+
Sbjct: 72 YINSPGGVVTSGLAIYDTMQFIKPAVSTLCIGQAASMGSLLLTAGEKDMRFALPNARIMV 131
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQPSGG+ GQ D+ +H ++I+ + LN +Y KHTG+S++ I+ ++RD FMT + A +
Sbjct: 132 HQPSGGFQGQVTDIMLHAQEILNLKRRLNEIYVKHTGRSMDKIEDALERDNFMTAKAALD 191
Query: 214 FGIIDEVIDQRP 225
FG+ID VIDQRP
Sbjct: 192 FGLIDAVIDQRP 203
>gi|182417589|ref|ZP_02948911.1| Clp protease [Clostridium butyricum 5521]
gi|237667767|ref|ZP_04527751.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
butyricum E4 str. BoNT E BL5262]
gi|182378544|gb|EDT76073.1| Clp protease [Clostridium butyricum 5521]
gi|237656115|gb|EEP53671.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
butyricum E4 str. BoNT E BL5262]
Length = 201
Score = 257 bits (656), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 112/194 (57%), Positives = 157/194 (80%)
Query: 32 FSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPI 91
SL+PMV+E +SRGER+YDIFSRLLKERII ++G +ND +A ++VAQLLFL+SE+P K I
Sbjct: 1 MSLVPMVVEQTSRGERSYDIFSRLLKERIIMLSGEVNDASAQLIVAQLLFLDSEDPDKDI 60
Query: 92 HMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTI 151
+Y+NSPGG VTAG+AIYDTMQ I + ++TIC+G AASMG+ LL+ G KG+R ALPN+ I
Sbjct: 61 SLYINSPGGSVTAGMAIYDTMQLINADVSTICVGMAASMGAFLLSCGAKGKRYALPNAEI 120
Query: 152 MIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEA 211
MIHQP GG+ GQ D+ IH ++++V + LN ++TG+ +EVIQ++ +RD FM+ E+A
Sbjct: 121 MIHQPLGGFQGQVTDIEIHANRMLKVKEVLNKTLSENTGKPLEVIQRDTERDNFMSAEDA 180
Query: 212 KEFGIIDEVIDQRP 225
KE+G++DE+I ++P
Sbjct: 181 KEYGLVDEIIVKKP 194
>gi|342905185|ref|ZP_08726974.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
haemolyticus M21621]
gi|419840044|ref|ZP_14363442.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Haemophilus
haemolyticus HK386]
gi|341951687|gb|EGT78246.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
haemolyticus M21621]
gi|386908569|gb|EIJ73261.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Haemophilus
haemolyticus HK386]
Length = 193
Score = 257 bits (656), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 115/192 (59%), Positives = 156/192 (81%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
S+IPMV+E +SRGER+YDI+SRLLKER+I ++G + D A+++VAQLLFLESE+P+K I+
Sbjct: 2 SVIPMVVEQTSRGERSYDIYSRLLKERVIFLSGEVEDRMANLIVAQLLFLESEDPTKDIN 61
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
+Y+NSPGG VTAG+AIYDTMQ+I+ I T+C+GQA SMG+ LLA GT G+R ALPN+ +M
Sbjct: 62 IYINSPGGSVTAGMAIYDTMQFIKPDIRTLCIGQACSMGAFLLAGGTAGKRAALPNARVM 121
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQP GG+ GQA D+ IH ++I+++ LN HTGQSIE I+K+ DRD FM+ EEAK
Sbjct: 122 IHQPLGGFRGQASDIQIHAQEILKIKHTLNDRLAFHTGQSIERIEKDTDRDNFMSAEEAK 181
Query: 213 EFGIIDEVIDQR 224
+G++DEV+ +R
Sbjct: 182 AYGLVDEVLIKR 193
>gi|308050308|ref|YP_003913874.1| ATP-dependent Clp protease proteolytic subunit ClpP [Ferrimonas
balearica DSM 9799]
gi|307632498|gb|ADN76800.1| ATP-dependent Clp protease proteolytic subunit ClpP [Ferrimonas
balearica DSM 9799]
Length = 207
Score = 257 bits (656), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 111/192 (57%), Positives = 155/192 (80%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+LIPMV+E +++GER+YDI+SRLLKER+I + GP+ D A++VVAQLLFLESENP K I+
Sbjct: 11 ALIPMVVEQTAKGERSYDIYSRLLKERVIFLTGPVEDHMANLVVAQLLFLESENPDKDIY 70
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
+Y+NSPGG VTAG++IYDTMQ+I+ ++T+C+GQAASMG+ LLA G KG+R LPNS +M
Sbjct: 71 LYINSPGGSVTAGMSIYDTMQFIKPDVSTVCMGQAASMGAFLLAGGAKGKRHVLPNSRVM 130
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQP GG+ GQA D+ IH ++I+ + LN L +HTGQ +EVI+++ DRD FM+ +A
Sbjct: 131 IHQPLGGFQGQASDIAIHAQEILGIKHKLNLLLAEHTGQPMEVIERDTDRDNFMSATDAV 190
Query: 213 EFGIIDEVIDQR 224
E+G++D V+ +R
Sbjct: 191 EYGLVDSVLTRR 202
>gi|323139086|ref|ZP_08074144.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Methylocystis
sp. ATCC 49242]
gi|322395650|gb|EFX98193.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Methylocystis
sp. ATCC 49242]
Length = 210
Score = 257 bits (656), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 117/198 (59%), Positives = 154/198 (77%)
Query: 27 ISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESEN 86
I S LIP VIE++SRGER +DI+SRLL+ERII + GPI D A V++AQLLFLESEN
Sbjct: 5 IEVYSQYLIPQVIENTSRGERGFDIYSRLLRERIIFVTGPIEDHMASVIIAQLLFLESEN 64
Query: 87 PSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRAL 146
P K I +Y+NSPGG VT+GLAIYDTMQ+I+ ++T+C+GQAASMGSLLL +G G R AL
Sbjct: 65 PKKEISLYINSPGGVVTSGLAIYDTMQFIKPKVSTLCVGQAASMGSLLLCAGADGLRYAL 124
Query: 147 PNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFM 206
PN+ +M+HQPSGG+ GQA D+ H + I++V LN +Y +HTG+ + I++ +DRD+FM
Sbjct: 125 PNARVMLHQPSGGFQGQASDIQRHAEDILKVKKRLNDIYVRHTGKDYDTIERTLDRDHFM 184
Query: 207 TPEEAKEFGIIDEVIDQR 224
+ EEAK FGIID V ++R
Sbjct: 185 SAEEAKSFGIIDSVQEKR 202
>gi|46579746|ref|YP_010554.1| ATP-dependent Clp protease proteolytic subunit [Desulfovibrio
vulgaris str. Hildenborough]
gi|120602778|ref|YP_967178.1| ATP-dependent Clp protease proteolytic subunit [Desulfovibrio
vulgaris DP4]
gi|387153092|ref|YP_005702028.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Desulfovibrio
vulgaris RCH1]
gi|60389677|sp|Q72CE8.1|CLPP_DESVH RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|166201819|sp|A1VE85.1|CLPP_DESVV RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|46449161|gb|AAS95813.1| ATP-dependent Clp protease, proteolytic subunit [Desulfovibrio
vulgaris str. Hildenborough]
gi|120563007|gb|ABM28751.1| ATP-dependent Clp protease proteolytic subunit ClpP [Desulfovibrio
vulgaris DP4]
gi|311233536|gb|ADP86390.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Desulfovibrio
vulgaris RCH1]
Length = 201
Score = 257 bits (656), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 116/201 (57%), Positives = 157/201 (78%), Gaps = 2/201 (0%)
Query: 35 IPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHMY 94
+P+VIE + R ERAYDI+SRLLK+RI+ + PI+D A ++ AQLLFLESENP K IHMY
Sbjct: 3 VPIVIESTGRAERAYDIYSRLLKDRIVLLGTPIDDQVASLICAQLLFLESENPEKEIHMY 62
Query: 95 LNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMIH 154
+NSPGG VTAG+AIYDTMQYI SP++T+C+GQAASMG+LLLA+G G R +LP+S IMIH
Sbjct: 63 INSPGGSVTAGMAIYDTMQYINSPVSTLCMGQAASMGALLLAAGAPGLRFSLPHSRIMIH 122
Query: 155 QPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKEF 214
QPSGG+ GQA D+ I ++++R+ +LNA+ +HTG+ +E + + +RDYFM PEEA+ +
Sbjct: 123 QPSGGFQGQATDIDIQAREVLRLKQSLNAIMSQHTGKPLEQVALDTERDYFMGPEEAQAY 182
Query: 215 GIIDEVIDQRPMALVTDAVGR 235
G+ID V+ R A TD + +
Sbjct: 183 GLIDRVLTSRSEA--TDTISK 201
>gi|254512409|ref|ZP_05124476.1| Clp protease [Rhodobacteraceae bacterium KLH11]
gi|221536120|gb|EEE39108.1| Clp protease [Rhodobacteraceae bacterium KLH11]
Length = 196
Score = 257 bits (656), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 118/188 (62%), Positives = 153/188 (81%)
Query: 37 MVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHMYLN 96
MV+E +SRGERAYDIFSRLLKERII INGPI+D +H+VVAQLL LE+ENP+K I +Y+N
Sbjct: 1 MVVEQTSRGERAYDIFSRLLKERIIFINGPIHDGMSHLVVAQLLHLEAENPNKEISIYIN 60
Query: 97 SPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMIHQP 156
SPGG VT+GL+IYDTMQYI+ +T+ +GQAASMGS+LLA G KG R +LPNS IM+HQP
Sbjct: 61 SPGGVVTSGLSIYDTMQYIKPKCSTLVIGQAASMGSVLLAGGEKGMRFSLPNSRIMVHQP 120
Query: 157 SGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKEFGI 216
SGGY GQA D+ IH + ++ D L +Y +HTGQ+ + ++K +DRD FM+PEEAK++G
Sbjct: 121 SGGYQGQASDIMIHAAETQKLKDRLYDIYVRHTGQTKKAVEKALDRDNFMSPEEAKDWGH 180
Query: 217 IDEVIDQR 224
IDE+++ R
Sbjct: 181 IDEIVENR 188
>gi|114567171|ref|YP_754325.1| ATP-dependent Clp protease proteolytic subunit [Syntrophomonas
wolfei subsp. wolfei str. Goettingen]
gi|122317850|sp|Q0AWF0.1|CLPP_SYNWW RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|114338106|gb|ABI68954.1| ATP-dependent Clp protease proteolytic subunit ClpP [Syntrophomonas
wolfei subsp. wolfei str. Goettingen]
Length = 200
Score = 257 bits (656), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 115/188 (61%), Positives = 155/188 (82%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
L+PMV+E ++RGER+YDI+SRLLK+RII + I+D A++V+AQLLFLE+E+P K I +
Sbjct: 4 LVPMVVEQTNRGERSYDIYSRLLKDRIIFLGSGIDDTVANLVIAQLLFLEAEDPDKDISL 63
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG +TAG+AIYDT+QYIR ++TIC+G AASMG+ LLA+G KG+R ALPN+ IMI
Sbjct: 64 YINSPGGSITAGMAIYDTLQYIRPDVSTICVGLAASMGAFLLAAGKKGKRYALPNAEIMI 123
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQP+GG GQA D+ IH ++I+ + ++LN + + TGQ +E IQK+ DRDYFMT +EAKE
Sbjct: 124 HQPAGGTQGQATDIEIHARRIMNMKESLNKILAERTGQPLERIQKDTDRDYFMTAQEAKE 183
Query: 214 FGIIDEVI 221
+GIIDEVI
Sbjct: 184 YGIIDEVI 191
>gi|407939906|ref|YP_006855547.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Acidovorax
sp. KKS102]
gi|407897700|gb|AFU46909.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Acidovorax
sp. KKS102]
Length = 202
Score = 257 bits (656), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 111/198 (56%), Positives = 156/198 (78%)
Query: 27 ISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESEN 86
+ + ++PMVIE S RGER+YDI+SRLLKER+I + GP+ND TA++VVAQLLFLESEN
Sbjct: 4 LETQGLGMVPMVIEQSGRGERSYDIYSRLLKERVIFLVGPVNDQTANLVVAQLLFLESEN 63
Query: 87 PSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRAL 146
P K I Y+NSPGG V+AG+AI+DTM +I+ ++T+C G AASMG+ LLA+G KG+R AL
Sbjct: 64 PDKDISFYINSPGGSVSAGMAIFDTMNFIKPDVSTLCTGMAASMGAFLLAAGAKGKRFAL 123
Query: 147 PNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFM 206
PNS +MIHQP GG GQA ++ IH ++I++ + LN + + TGQ +E IQ++ +RDYF+
Sbjct: 124 PNSKVMIHQPLGGMQGQATEIEIHAREILKTREQLNKILAERTGQPLEKIQRDTERDYFL 183
Query: 207 TPEEAKEFGIIDEVIDQR 224
+ +EAK++G++D+VI QR
Sbjct: 184 SADEAKDYGLVDQVISQR 201
>gi|408379474|ref|ZP_11177068.1| ATP-dependent Clp protease proteolytic subunit [Agrobacterium
albertimagni AOL15]
gi|407746958|gb|EKF58480.1| ATP-dependent Clp protease proteolytic subunit [Agrobacterium
albertimagni AOL15]
Length = 211
Score = 257 bits (656), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 113/194 (58%), Positives = 153/194 (78%)
Query: 31 SFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKP 90
+ +L+PMV+E ++RGER+YDIFSRLLKERII + GP+ D A +V AQLLFLE+ENP K
Sbjct: 8 ALALVPMVVEQTNRGERSYDIFSRLLKERIIFLTGPVEDTMASLVCAQLLFLEAENPKKE 67
Query: 91 IHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNST 150
I +Y+NSPGG VT+G+AIYDTMQ+IR ++T+C+GQAASMGSLLLA+G KG R A PNS
Sbjct: 68 IAIYINSPGGVVTSGMAIYDTMQFIRPAVSTLCIGQAASMGSLLLAAGEKGMRFATPNSR 127
Query: 151 IMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEE 210
IM+HQPSGG+ GQA D+ H + I+++ LN +Y KHTG++ + ++ +DRD+FM E
Sbjct: 128 IMVHQPSGGFQGQASDIERHARDIIKMKRRLNEVYVKHTGRTYDEVENTLDRDHFMESSE 187
Query: 211 AKEFGIIDEVIDQR 224
AKE+G+ID ++ R
Sbjct: 188 AKEWGLIDRILTSR 201
>gi|407696210|ref|YP_006820998.1| ATP-dependent Clp protease proteolytic subunit [Alcanivorax
dieselolei B5]
gi|407253548|gb|AFT70655.1| ATP-dependent Clp protease proteolytic subunit [Alcanivorax
dieselolei B5]
Length = 216
Score = 256 bits (655), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 110/191 (57%), Positives = 158/191 (82%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
L+P+V+E +SRGER +DI+SRLLKER+I + G + D A+++VAQ+LFLESENP K IH+
Sbjct: 26 LVPIVVEQTSRGERQFDIYSRLLKERVIFLIGQVEDYMANLIVAQMLFLESENPDKDIHL 85
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VTAG++IYDTMQ+I+ ++T+C+GQAASMG+ LLA+G +G+R ALP+S +MI
Sbjct: 86 YINSPGGSVTAGMSIYDTMQFIKPEVSTMCVGQAASMGAFLLAAGAEGKRLALPHSRVMI 145
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQP GG+ GQA D+ IH K+I+++ LN L KHTGQ +EV++++ DRD FM+ E+A+E
Sbjct: 146 HQPLGGFQGQASDIEIHAKEILKIKAQLNELLAKHTGQPLEVLERDTDRDNFMSAEQARE 205
Query: 214 FGIIDEVIDQR 224
+G+ID+V+ +R
Sbjct: 206 YGLIDQVVHRR 216
>gi|296446284|ref|ZP_06888230.1| Endopeptidase Clp [Methylosinus trichosporium OB3b]
gi|296256185|gb|EFH03266.1| Endopeptidase Clp [Methylosinus trichosporium OB3b]
Length = 211
Score = 256 bits (655), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 115/192 (59%), Positives = 151/192 (78%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
LIP VIE++SRGER +DI+SRLL+ERII + G + D A V++AQLLFLE+ENP + I +
Sbjct: 12 LIPQVIENTSRGERGFDIYSRLLRERIIFLTGQVEDHMASVIIAQLLFLEAENPKREIFL 71
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VT+GLAIYDTMQYIR + T+C+GQAASMGSLLL +G G+R ALPN+ IM+
Sbjct: 72 YINSPGGVVTSGLAIYDTMQYIRPKVATLCIGQAASMGSLLLCAGEAGQRFALPNARIMV 131
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQPSGG+ GQA D+ H + I+++ LN +Y +HTG+ E I+K +DRD+FM+ EEAK+
Sbjct: 132 HQPSGGFQGQASDILRHAEDIMKIKKRLNEIYVRHTGRDYETIEKTLDRDHFMSAEEAKD 191
Query: 214 FGIIDEVIDQRP 225
FGI+D V RP
Sbjct: 192 FGIVDHVQVNRP 203
>gi|335047467|ref|ZP_08540488.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Parvimonas sp. oral taxon 110 str. F0139]
gi|333761275|gb|EGL38830.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Parvimonas sp. oral taxon 110 str. F0139]
Length = 192
Score = 256 bits (655), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 116/190 (61%), Positives = 156/190 (82%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+LIPMV+E ++RGER+YDI+SRLLKERII ++G +ND A ++VAQLLFLESE+P K I
Sbjct: 2 ALIPMVVEQTNRGERSYDIYSRLLKERIIFLSGEVNDQMADLIVAQLLFLESEDPKKDIQ 61
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
+Y+NSPGG V+AGLAIYDT+QYI+ ++TIC+G+AASMG+ LL SG KG+R ALPN+ IM
Sbjct: 62 IYINSPGGSVSAGLAIYDTIQYIKPDVSTICIGRAASMGAFLLTSGAKGKRFALPNADIM 121
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQP GG GQA+D+ I ++I++V LN + K TGQS++ I+K+ DRD++M+ EAK
Sbjct: 122 IHQPLGGAQGQAEDIKIQAQKILQVRATLNQILAKRTGQSLKKIEKDTDRDFYMSAYEAK 181
Query: 213 EFGIIDEVID 222
E+GIIDEVI+
Sbjct: 182 EYGIIDEVIE 191
>gi|225175200|ref|ZP_03729196.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Dethiobacter
alkaliphilus AHT 1]
gi|225169376|gb|EEG78174.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Dethiobacter
alkaliphilus AHT 1]
Length = 193
Score = 256 bits (655), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 115/193 (59%), Positives = 158/193 (81%)
Query: 32 FSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPI 91
+L+PMV+E ++RGERAYDI+SRLLK+RII I PI+D+ A++V+AQLLFLESE+P K I
Sbjct: 1 MNLVPMVVEQTNRGERAYDIYSRLLKDRIIFIGSPIDDNVANLVIAQLLFLESEDPEKDI 60
Query: 92 HMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTI 151
++Y+NSPGG V AGLAIYDTMQYI+ ++TIC+G AASMG++LLA+G G+R +LPNS I
Sbjct: 61 NIYVNSPGGSVYAGLAIYDTMQYIKPDVSTICVGLAASMGAVLLAAGADGKRFSLPNSRI 120
Query: 152 MIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEA 211
M+HQP GG GQA D+ IH K+I+R+ + LN + HTG+ +E I ++ DRDYFM+ E+A
Sbjct: 121 MVHQPLGGAQGQAVDIEIHAKEILRIRERLNEILSGHTGKPVEQIARDTDRDYFMSAEQA 180
Query: 212 KEFGIIDEVIDQR 224
KE+G+ID V+++R
Sbjct: 181 KEYGLIDGVLEKR 193
>gi|226489629|emb|CAX74965.1| ClpP caseinolytic peptidase, ATP-dependent, proteolytic subunit
homolog [Schistosoma japonicum]
Length = 253
Score = 256 bits (655), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 122/217 (56%), Positives = 164/217 (75%), Gaps = 8/217 (3%)
Query: 31 SFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKP 90
S SL+P+V++ ++ GERAYDI+SRLLK+RIIC+ G I+D+ A +VVAQLL+L+SE+ P
Sbjct: 45 SMSLVPIVLDKTTHGERAYDIYSRLLKDRIICLMGSISDEVAGLVVAQLLYLQSEDKKIP 104
Query: 91 IHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNST 150
IH+Y+NSPGG VTAGLAIYDTMQ+I+ P+ T C+GQA+SMGSLLLA+G G R ALP+S
Sbjct: 105 IHIYINSPGGVVTAGLAIYDTMQFIKPPVATWCVGQASSMGSLLLAAGAPGLRFALPHSR 164
Query: 151 IMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEE 210
IM+HQPSG GQA D+ IH ++I+++ + +N +Y +HT QS EVI+K MDRDYFMT EE
Sbjct: 165 IMVHQPSGSAHGQASDIKIHAEEIIKMRNIINTIYERHTKQSQEVIEKWMDRDYFMTAEE 224
Query: 211 AKEFGIIDEVIDQRPMALVTDAVGREGKEGKEGKEKG 247
A FGI+D V+ + P + KE + K +G
Sbjct: 225 AVSFGIVDMVLREAP--------ADKSKEVEHSKSRG 253
>gi|381158611|ref|ZP_09867844.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thiorhodovibrio sp. 970]
gi|380879969|gb|EIC22060.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thiorhodovibrio sp. 970]
Length = 232
Score = 256 bits (655), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 115/197 (58%), Positives = 158/197 (80%)
Query: 30 RSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSK 89
+ L+P+V+E ++RGER++DIFSRLLKER+I + GP++D TA++VVAQ+LFLESENP K
Sbjct: 26 QGLGLVPIVVEQTARGERSFDIFSRLLKERVIFLVGPVDDHTANLVVAQMLFLESENPDK 85
Query: 90 PIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNS 149
IH Y+NSPGG VTAGLAIYDTM +IR ++T+C+GQAASMG+LLLA GT G+R LP+S
Sbjct: 86 DIHFYINSPGGSVTAGLAIYDTMCFIRPDVSTMCVGQAASMGALLLAGGTAGKRFCLPHS 145
Query: 150 TIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPE 209
+MIHQP GG+ GQA D+ IH ++I+++ + LN ++ HTGQ IE I + +RD F+ E
Sbjct: 146 RMMIHQPLGGFQGQASDIDIHAREILKIREQLNRIFSHHTGQPIEKIADDTERDRFLGGE 205
Query: 210 EAKEFGIIDEVIDQRPM 226
EA ++G+ID+VID+R M
Sbjct: 206 EAVDYGLIDKVIDKRDM 222
>gi|332798601|ref|YP_004460100.1| ATP-dependent Clp protease proteolytic subunit [Tepidanaerobacter
acetatoxydans Re1]
gi|438001582|ref|YP_007271325.1| ATP-dependent Clp protease proteolytic subunit [Tepidanaerobacter
acetatoxydans Re1]
gi|332696336|gb|AEE90793.1| ATP-dependent Clp protease proteolytic subunit [Tepidanaerobacter
acetatoxydans Re1]
gi|432178376|emb|CCP25349.1| ATP-dependent Clp protease proteolytic subunit [Tepidanaerobacter
acetatoxydans Re1]
Length = 194
Score = 256 bits (655), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 118/193 (61%), Positives = 155/193 (80%)
Query: 32 FSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPI 91
SL+P+V+E ++RGERAYDI+SRLLKERII I I+D A + +AQ+L+LESE+P K I
Sbjct: 1 MSLVPIVVEQTNRGERAYDIYSRLLKERIIFIGTSIDDTVASLAIAQMLYLESEDPDKDI 60
Query: 92 HMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTI 151
+Y+NSPGG VTAGLAIYDTMQYI+ ++TIC+G AASMG++LLA+GT+G+R ALPNS I
Sbjct: 61 RLYINSPGGSVTAGLAIYDTMQYIKPDVSTICMGLAASMGAVLLAAGTEGKRYALPNSRI 120
Query: 152 MIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEA 211
MIHQP GG G+A D+ H K+I+R+ + LN + HT QSIE I+K+ DRDYFM+ +EA
Sbjct: 121 MIHQPWGGVQGKAVDIETHAKEILRLRELLNEILANHTKQSIEKIEKDTDRDYFMSSKEA 180
Query: 212 KEFGIIDEVIDQR 224
E+G+IDEVI +R
Sbjct: 181 LEYGLIDEVIHKR 193
>gi|452838282|gb|EME40223.1| ATP-dependent Clp protease-like protein [Dothistroma septosporum
NZE10]
Length = 200
Score = 256 bits (655), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 123/195 (63%), Positives = 151/195 (77%), Gaps = 2/195 (1%)
Query: 35 IPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHMY 94
+P V E G DIFSRLLKERIIC+NG + + T+ +VAQLLFLE+ENPSKPI +Y
Sbjct: 1 MPFVTETVGGGWHTSDIFSRLLKERIICLNGEVEETTSASIVAQLLFLEAENPSKPISLY 60
Query: 95 LNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMIH 154
+NSPGG VTAGLAIYDTMQYI+SPI TICLGQAASMGSLLL G KG+R LP+S IM+H
Sbjct: 61 INSPGGSVTAGLAIYDTMQYIQSPITTICLGQAASMGSLLLCGGEKGQRYCLPHSRIMVH 120
Query: 155 QPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKH--TGQSIEVIQKNMDRDYFMTPEEAK 212
Q SGGYSGQA D+ IH K+I+RV + LN +Y +H +S+E I + M+RD+FM EEAK
Sbjct: 121 QVSGGYSGQASDIAIHAKEILRVREQLNKIYQRHLTVERSLEEIGRVMERDFFMGAEEAK 180
Query: 213 EFGIIDEVIDQRPMA 227
E+GI+D V+D+R A
Sbjct: 181 EWGIVDTVLDRRAQA 195
>gi|83858431|ref|ZP_00951953.1| ATP-dependent Clp protease, proteolytic subunit [Oceanicaulis sp.
HTCC2633]
gi|83853254|gb|EAP91106.1| ATP-dependent Clp protease, proteolytic subunit [Oceanicaulis sp.
HTCC2633]
Length = 207
Score = 256 bits (655), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 116/193 (60%), Positives = 150/193 (77%)
Query: 32 FSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPI 91
+L+PMV+E S+RGERAYDI+SRLLKERI+ + GPI D A ++VAQLLFLESENP+K I
Sbjct: 9 MNLVPMVVEQSARGERAYDIYSRLLKERIVFVTGPIEDHMASLMVAQLLFLESENPNKEI 68
Query: 92 HMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTI 151
MY+NSPGG V+AGLAIYDTMQYI P+ T C+G AASMGSLLL +G KG R A PN+ I
Sbjct: 69 AMYINSPGGSVSAGLAIYDTMQYISCPVATACVGMAASMGSLLLTAGDKGMRFATPNARI 128
Query: 152 MIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEA 211
M+HQPSGG+ G D+ H + I+++ +N +Y KHTGQ +E ++K +DRD++M EA
Sbjct: 129 MLHQPSGGFRGTTADIERHGEDILKIKRRMNEIYVKHTGQPLEKVEKTLDRDFYMDAMEA 188
Query: 212 KEFGIIDEVIDQR 224
KEFG+ID V ++R
Sbjct: 189 KEFGLIDHVYEKR 201
>gi|289422712|ref|ZP_06424552.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Peptostreptococcus anaerobius 653-L]
gi|289156891|gb|EFD05516.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Peptostreptococcus anaerobius 653-L]
Length = 194
Score = 256 bits (655), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 113/193 (58%), Positives = 153/193 (79%)
Query: 32 FSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPI 91
+L+P V+E RGER+YDI+SRLLK+RII + +ND TA +VVAQ+LFLE+++P K I
Sbjct: 1 MALVPYVVEQDGRGERSYDIYSRLLKDRIIFLGDEVNDQTASLVVAQMLFLEADDPDKDI 60
Query: 92 HMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTI 151
H+Y+NSPGG VTAG+AIYDTMQYI++ ++TIC+G AASMG+ LLA+G KG+R ALPNST+
Sbjct: 61 HLYINSPGGSVTAGMAIYDTMQYIKADVSTICVGMAASMGAFLLAAGAKGKRYALPNSTV 120
Query: 152 MIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEA 211
MIHQP GG GQA D+ IHTK ++ + + LN + + TGQ +E ++ N +RD FMT +EA
Sbjct: 121 MIHQPLGGTRGQATDIEIHTKYLLSIKEKLNKILAERTGQDLETVKANTERDNFMTADEA 180
Query: 212 KEFGIIDEVIDQR 224
++FG+IDEVI R
Sbjct: 181 RDFGLIDEVIAGR 193
>gi|383758647|ref|YP_005437632.1| ATP-dependent Clp protease, protease subunit ClpP [Rubrivivax
gelatinosus IL144]
gi|381379316|dbj|BAL96133.1| ATP-dependent Clp protease, protease subunit ClpP [Rubrivivax
gelatinosus IL144]
Length = 202
Score = 256 bits (655), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 112/198 (56%), Positives = 156/198 (78%)
Query: 27 ISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESEN 86
I ++PMVIE S RGERAYDI+SRLL+ERI+ + GP+ND A++V AQLLFLESEN
Sbjct: 4 IETTGLGMVPMVIEQSGRGERAYDIYSRLLRERIVFLVGPVNDQVANLVCAQLLFLESEN 63
Query: 87 PSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRAL 146
P K I +Y+NSPGG V+AGL+I+DTM +I+ ++T+C+G AASMGS LL +G KG+R AL
Sbjct: 64 PDKDIFLYINSPGGSVSAGLSIFDTMNFIKPEVSTLCMGMAASMGSFLLMAGAKGKRFAL 123
Query: 147 PNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFM 206
PNS +MIHQPSGG GQA D+ I ++I++ + LN +Y + TGQSIE I+ +M+RD ++
Sbjct: 124 PNSRVMIHQPSGGAQGQASDIEIQAREIIKTREQLNRIYAERTGQSIEKIEADMERDMWL 183
Query: 207 TPEEAKEFGIIDEVIDQR 224
+P EAK++G+ID+V+++R
Sbjct: 184 SPSEAKDYGLIDQVLEKR 201
>gi|121593621|ref|YP_985517.1| ATP-dependent Clp protease proteolytic subunit [Acidovorax sp.
JS42]
gi|166201795|sp|A1W5B6.1|CLPP_ACISJ RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|120605701|gb|ABM41441.1| ATP-dependent Clp protease proteolytic subunit ClpP [Acidovorax sp.
JS42]
Length = 202
Score = 256 bits (655), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 116/199 (58%), Positives = 155/199 (77%)
Query: 27 ISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESEN 86
+ ++ +IPMVIE S RGER+YDI+SRLLKER+I + G +ND TA++VVAQLLFLESEN
Sbjct: 4 LETQALGMIPMVIEQSGRGERSYDIYSRLLKERVIFLVGEVNDQTANLVVAQLLFLESEN 63
Query: 87 PSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRAL 146
P K I Y+NSPGG VTAG+AIYDTMQ+I+ ++T+C G AASMG+ LLA+G KG+R +L
Sbjct: 64 PDKDISFYINSPGGSVTAGMAIYDTMQFIKPDVSTLCCGFAASMGAFLLAAGAKGKRYSL 123
Query: 147 PNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFM 206
PNS IMIHQ GG GQA D+ IH + I+R + +N + + TGQ IE ++ + +RDYFM
Sbjct: 124 PNSKIMIHQVLGGARGQATDIEIHARDILRTKEQMNRILAERTGQPIEKVKADTERDYFM 183
Query: 207 TPEEAKEFGIIDEVIDQRP 225
T +EAK++GI+D+VI +RP
Sbjct: 184 TADEAKDYGIVDQVIAKRP 202
>gi|226489631|emb|CAX74966.1| ClpP caseinolytic peptidase, ATP-dependent, proteolytic subunit
homolog [Schistosoma japonicum]
Length = 249
Score = 256 bits (655), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 122/217 (56%), Positives = 164/217 (75%), Gaps = 8/217 (3%)
Query: 31 SFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKP 90
S SL+P+V++ ++ GERAYDI+SRLLK+RIIC+ G I+D+ A +VVAQLL+L+SE+ P
Sbjct: 41 SMSLVPIVLDKTTHGERAYDIYSRLLKDRIICLMGAISDEVAGLVVAQLLYLQSEDKKIP 100
Query: 91 IHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNST 150
IH+Y+NSPGG VTAGLAIYDTMQ+I+ P+ T C+GQA+SMGSLLLA+G G R ALP+S
Sbjct: 101 IHIYINSPGGVVTAGLAIYDTMQFIKPPVATWCVGQASSMGSLLLAAGAPGLRFALPHSR 160
Query: 151 IMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEE 210
IM+HQPSG GQA D+ IH ++I+++ + +N +Y +HT QS EVI+K MDRDYFMT EE
Sbjct: 161 IMVHQPSGSAHGQASDIKIHAEEIIKMRNIINTIYERHTKQSQEVIEKWMDRDYFMTAEE 220
Query: 211 AKEFGIIDEVIDQRPMALVTDAVGREGKEGKEGKEKG 247
A FGI+D V+ + P + KE + K +G
Sbjct: 221 AVSFGIVDMVLREAP--------ADKSKEVEHSKSRG 249
>gi|124266485|ref|YP_001020489.1| ATP-dependent Clp protease proteolytic subunit ClpP [Methylibium
petroleiphilum PM1]
gi|189082491|sp|A2SFB5.1|CLPP_METPP RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|124259260|gb|ABM94254.1| ATP-dependent Clp protease proteolytic subunit ClpP [Methylibium
petroleiphilum PM1]
Length = 202
Score = 256 bits (655), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 113/198 (57%), Positives = 159/198 (80%)
Query: 27 ISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESEN 86
+ ++ ++P+VIE S RGERAYDI+SRLL+ER+I + GP+ND TA++VVAQLLFLESEN
Sbjct: 4 LETQNLGMVPVVIEQSGRGERAYDIYSRLLRERVIFLVGPVNDQTANLVVAQLLFLESEN 63
Query: 87 PSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRAL 146
P K I +Y+NSPGG V+AGL+I+DTMQ+I+ ++T+C+G AASMG+ LLA+G KG+R AL
Sbjct: 64 PDKDISLYINSPGGSVSAGLSIFDTMQFIKPDVSTLCMGIAASMGAFLLAAGAKGKRFAL 123
Query: 147 PNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFM 206
PNS +MIHQPSGG GQA D+ I ++I+++ ++LN + + TGQ +E I+ + +RDYFM
Sbjct: 124 PNSRVMIHQPSGGAQGQATDIEIQAREILKLRESLNGILAERTGQPLEKIRADSERDYFM 183
Query: 207 TPEEAKEFGIIDEVIDQR 224
+ EEA +G+ID+VI QR
Sbjct: 184 SAEEATGYGLIDKVIAQR 201
>gi|260222837|emb|CBA32804.1| ATP-dependent Clp protease proteolytic subunit [Curvibacter
putative symbiont of Hydra magnipapillata]
Length = 220
Score = 256 bits (655), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 111/202 (54%), Positives = 159/202 (78%)
Query: 24 SAQISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLE 83
S + ++ ++PMVIE S RGER+YDI+SRLLKER+I + GP+ND TA++VVAQLLFLE
Sbjct: 19 SGAMETQALGMVPMVIEQSGRGERSYDIYSRLLKERVIFLVGPVNDQTANLVVAQLLFLE 78
Query: 84 SENPSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGER 143
SENP K I Y+NSPGG V+AG+AIYDTM +I+ ++T+C G AASMG+ LLA+G KG+R
Sbjct: 79 SENPDKDISFYINSPGGSVSAGMAIYDTMNFIKPDVSTLCTGMAASMGAFLLAAGAKGKR 138
Query: 144 RALPNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRD 203
+LPNS +MIHQP GG GQA ++ IH ++I++ + LN + + TGQ +E I+++ +RD
Sbjct: 139 FSLPNSKVMIHQPLGGTQGQATEIEIHAREILKTREQLNKILAERTGQPLEKIERDTERD 198
Query: 204 YFMTPEEAKEFGIIDEVIDQRP 225
Y+++ +EAKE+G++D+VI +RP
Sbjct: 199 YYLSADEAKEYGLVDQVIAKRP 220
>gi|226939792|ref|YP_002794865.1| Protease subunit of ATP-dependent Clp protease [Laribacter
hongkongensis HLHK9]
gi|254763792|sp|C1D539.1|CLPP_LARHH RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|226714718|gb|ACO73856.1| Protease subunit of ATP-dependent Clp protease [Laribacter
hongkongensis HLHK9]
Length = 212
Score = 256 bits (655), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 115/206 (55%), Positives = 159/206 (77%), Gaps = 4/206 (1%)
Query: 19 QLSKPSAQISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQ 78
Q S+P+ Q + L+PMV+E S RGERAYDI+SRLLKERI+ + GP+ D+TA++VVAQ
Sbjct: 8 QWSQPAPQ----ALGLVPMVVEQSGRGERAYDIYSRLLKERIVFMVGPVTDETANLVVAQ 63
Query: 79 LLFLESENPSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASG 138
+LFLESENP K IH+Y+NSPGG VTAGL+IYDTM +I+ ++T+C+GQAASMG+ LL++G
Sbjct: 64 MLFLESENPDKDIHLYINSPGGSVTAGLSIYDTMNFIKPSVSTLCIGQAASMGAFLLSAG 123
Query: 139 TKGERRALPNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQK 198
KG+R ALPNS +MIHQP GG+ GQA D IH ++I+ + LN L H G+ +E +++
Sbjct: 124 AKGKRFALPNSRVMIHQPLGGFQGQASDFEIHAREILTLKRKLNELMAAHCGRPLEDLER 183
Query: 199 NMDRDYFMTPEEAKEFGIIDEVIDQR 224
+ DRD FM +A E+G+ID+V++ R
Sbjct: 184 DTDRDNFMNAAQALEYGLIDQVLENR 209
>gi|349699184|ref|ZP_08900813.1| ATP-dependent Clp protease proteolytic subunit [Gluconacetobacter
europaeus LMG 18494]
Length = 211
Score = 256 bits (655), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 114/189 (60%), Positives = 153/189 (80%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E +SRGERA+DI+SRLL+ERII + GP+ D + +V AQLL+LES NPSK I
Sbjct: 13 ALVPMVVEQTSRGERAFDIYSRLLQERIIFLTGPVYDQVSALVSAQLLYLESVNPSKEIS 72
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
Y+NSPGG V+AGLAIYDTMQYIR P++T+C+GQAASMGSLLLA G KG R ALPNS +M
Sbjct: 73 FYINSPGGVVSAGLAIYDTMQYIRCPVSTVCIGQAASMGSLLLAGGEKGRRFALPNSRVM 132
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
+HQPSGG GQA D+ I ++I+ + LN +Y +HTG+++E I++ ++RD +M+ EEA+
Sbjct: 133 VHQPSGGAQGQASDIEIQAQEILTIRKRLNEIYKEHTGRTLEEIEQKLERDSYMSAEEAQ 192
Query: 213 EFGIIDEVI 221
FGI+DEV+
Sbjct: 193 AFGIVDEVV 201
>gi|91775762|ref|YP_545518.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Methylobacillus flagellatus KT]
gi|116243149|sp|Q1H1G0.1|CLPP_METFK RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|91709749|gb|ABE49677.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Methylobacillus flagellatus KT]
Length = 213
Score = 256 bits (655), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 116/200 (58%), Positives = 155/200 (77%)
Query: 25 AQISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLES 84
+Q A+ IPMVIE S RGER+YDI+SRLLKERII + GP+ND TA++VVAQLLFLE+
Sbjct: 10 SQFEAQGLGYIPMVIEQSGRGERSYDIYSRLLKERIIFLVGPVNDATANLVVAQLLFLEA 69
Query: 85 ENPSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERR 144
ENP K I+ Y+NSPGG VTAG+ IYDTMQ+++ ++T+C+GQAASMG+LLLA+G +G+R
Sbjct: 70 ENPDKDIYFYINSPGGSVTAGMGIYDTMQFVKPDVSTLCVGQAASMGALLLAAGAQGKRF 129
Query: 145 ALPNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDY 204
LPNS +MIHQP GG+ GQA D+ IH K+I+ + + LN + HTGQ +E I + DRD
Sbjct: 130 CLPNSRVMIHQPLGGFQGQASDIEIHAKEILFLREKLNHILASHTGQPVEKIALDTDRDN 189
Query: 205 FMTPEEAKEFGIIDEVIDQR 224
FM+ E++ +GI+D+VI R
Sbjct: 190 FMSAEQSVAYGIVDKVIASR 209
>gi|256556952|gb|ACU83574.1| ATP-dependent Clp protease subunit [uncultured bacterium
HF130_AEPn_2]
Length = 211
Score = 256 bits (655), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 111/192 (57%), Positives = 154/192 (80%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
L+PMV+E S+RGERAYDI+SRLLKER+I + GP+ D A+++ AQLLFLE+ENP K IH+
Sbjct: 19 LVPMVVEQSARGERAYDIYSRLLKERVIFLVGPVEDYMANLICAQLLFLEAENPDKDIHL 78
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VTAG++IYDTMQ+I+ ++T C+GQA SMG+ LL +G +G+R LPNS +MI
Sbjct: 79 YINSPGGSVTAGMSIYDTMQFIKPNVSTTCIGQACSMGAFLLTAGAEGKRFCLPNSRVMI 138
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQP GG+ GQA D+ IH K+I+ + + LN L KH+G ++E I+++ +RD FM+ E A+E
Sbjct: 139 HQPLGGFQGQASDIEIHAKEILFIRERLNTLMAKHSGHTLEEIERDTNRDNFMSAEAARE 198
Query: 214 FGIIDEVIDQRP 225
+G+ID VID+RP
Sbjct: 199 YGLIDAVIDKRP 210
>gi|77463765|ref|YP_353269.1| ATP-dependent Clp protease proteolytic subunit [Rhodobacter
sphaeroides 2.4.1]
gi|126462595|ref|YP_001043709.1| ATP-dependent Clp protease proteolytic subunit [Rhodobacter
sphaeroides ATCC 17029]
gi|221639635|ref|YP_002525897.1| ATP-dependent Clp protease proteolytic subunit [Rhodobacter
sphaeroides KD131]
gi|332558621|ref|ZP_08412943.1| ATP-dependent Clp protease proteolytic subunit [Rhodobacter
sphaeroides WS8N]
gi|124013827|sp|Q3J1G6.1|CLPP_RHOS4 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|166214702|sp|A3PKS1.1|CLPP_RHOS1 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|254763798|sp|B9KJU9.1|CLPP_RHOSK RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|77388183|gb|ABA79368.1| ATP-dependent Clp protease proteolytic subunit ClpP [Rhodobacter
sphaeroides 2.4.1]
gi|126104259|gb|ABN76937.1| ATP-dependent Clp protease proteolytic subunit ClpP [Rhodobacter
sphaeroides ATCC 17029]
gi|221160416|gb|ACM01396.1| ATP-dependent Clp protease proteolytic subunit [Rhodobacter
sphaeroides KD131]
gi|332276333|gb|EGJ21648.1| ATP-dependent Clp protease proteolytic subunit [Rhodobacter
sphaeroides WS8N]
Length = 210
Score = 256 bits (655), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 112/192 (58%), Positives = 156/192 (81%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E +SRGERAYDI+SR+LKERII ++GP++D + ++ AQLLFLE+ENPSK I
Sbjct: 11 TLVPMVVEQTSRGERAYDIYSRMLKERIIFLSGPVHDGMSSLICAQLLFLEAENPSKEIA 70
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
MY+NSPGG VT+GL+IYDTMQYIR ++T+ +GQAASMGSLLL +G KG R +LPNS +M
Sbjct: 71 MYINSPGGVVTSGLSIYDTMQYIRPKVSTLVIGQAASMGSLLLTAGEKGMRFSLPNSRVM 130
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
+HQPSGGY GQA D+ IH ++ ++ LN +Y +HTGQ +E ++ ++RD FM+ E+AK
Sbjct: 131 VHQPSGGYQGQATDIMIHARETEKLKRRLNEIYVRHTGQDLETVEAALERDNFMSAEDAK 190
Query: 213 EFGIIDEVIDQR 224
+G+IDE+++ R
Sbjct: 191 AWGLIDEILESR 202
>gi|343504824|ref|ZP_08742498.1| ATP-dependent Clp protease proteolytic subunit [Vibrio
ichthyoenteri ATCC 700023]
gi|343510911|ref|ZP_08748102.1| ATP-dependent Clp protease proteolytic subunit [Vibrio scophthalmi
LMG 19158]
gi|343517340|ref|ZP_08754346.1| ATP-dependent Clp protease proteolytic subunit [Vibrio sp. N418]
gi|342793664|gb|EGU29454.1| ATP-dependent Clp protease proteolytic subunit [Vibrio sp. N418]
gi|342799857|gb|EGU35407.1| ATP-dependent Clp protease proteolytic subunit [Vibrio scophthalmi
LMG 19158]
gi|342810440|gb|EGU45523.1| ATP-dependent Clp protease proteolytic subunit [Vibrio
ichthyoenteri ATCC 700023]
Length = 204
Score = 256 bits (654), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 113/192 (58%), Positives = 154/192 (80%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E +SRGER+YDI+SRLLKERII + G + D+ A++VVAQLLFLESENP K I
Sbjct: 12 ALVPMVVEQTSRGERSYDIYSRLLKERIIFLTGQVEDNMANLVVAQLLFLESENPDKDIF 71
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
+Y+NSPGG VTAG+AIYDTMQ+I+ ++T+C GQA SMG+ LLA G KG+R ALPNS +M
Sbjct: 72 LYINSPGGSVTAGMAIYDTMQFIKPNVSTLCTGQACSMGAFLLAGGAKGKRFALPNSRVM 131
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQP GG+ GQA D+ IH ++I+ + + LN L +HTGQ +++I+++ DRD FM+ +A
Sbjct: 132 IHQPLGGFQGQASDIQIHAQEILSIKEKLNNLLAEHTGQPMDIIERDTDRDNFMSAAQAA 191
Query: 213 EFGIIDEVIDQR 224
E+GIID+V+ R
Sbjct: 192 EYGIIDQVLTHR 203
>gi|387886908|ref|YP_006317207.1| endopeptidase Clp [Francisella noatunensis subsp. orientalis str.
Toba 04]
gi|386871724|gb|AFJ43731.1| endopeptidase Clp [Francisella noatunensis subsp. orientalis str.
Toba 04]
Length = 201
Score = 256 bits (654), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 115/192 (59%), Positives = 152/192 (79%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+P VIE ++ GERA+DI+SRLLKERI+ +NG +ND +A++V+AQLLFLESE+P K I+
Sbjct: 5 NLVPTVIEKTAGGERAFDIYSRLLKERIVFLNGEVNDHSANLVIAQLLFLESEDPDKDIY 64
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
Y+NSPGG VTAG+ +YDTMQ+I+ +NTIC+G AASMGSLLLA G K +R +LP+S IM
Sbjct: 65 FYINSPGGMVTAGMGVYDTMQFIKPDVNTICIGLAASMGSLLLAGGAKSKRYSLPSSQIM 124
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQP GG+ GQA D+ IH K I+R+ D LN + HTGQ +E I ++ DRD FM +EAK
Sbjct: 125 IHQPLGGFRGQASDIEIHAKNILRIKDRLNKVLAHHTGQDLETIVRDTDRDNFMMADEAK 184
Query: 213 EFGIIDEVIDQR 224
E+G+ID VI+ R
Sbjct: 185 EYGLIDHVIESR 196
>gi|451967071|ref|ZP_21920318.1| ATP-dependent Clp protease proteolytic subunit [Edwardsiella tarda
NBRC 105688]
gi|451314224|dbj|GAC65680.1| ATP-dependent Clp protease proteolytic subunit [Edwardsiella tarda
NBRC 105688]
Length = 206
Score = 256 bits (654), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 111/196 (56%), Positives = 156/196 (79%)
Query: 29 ARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPS 88
A +L+PMV+E +SRGER+YDIFSRLLKERII + G + D A+++VAQ+LFLE+ENP
Sbjct: 10 APHMALVPMVVEQTSRGERSYDIFSRLLKERIIFLTGQVEDHMANLIVAQMLFLEAENPE 69
Query: 89 KPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPN 148
K IH+Y+NSPGG +TAG++IYDTMQ+I+ ++TIC+GQA SMGS LLA+G +G+R LPN
Sbjct: 70 KDIHLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQACSMGSFLLAAGAQGKRFCLPN 129
Query: 149 STIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTP 208
S +MIHQP GG+ GQA D+ IH K+I+ + +N L KH+GQ +EVI+++ +RD FM+
Sbjct: 130 SRVMIHQPLGGFQGQATDIEIHAKEILSIKARMNTLMAKHSGQPLEVIERDTERDRFMSA 189
Query: 209 EEAKEFGIIDEVIDQR 224
+EA ++G++D V+ QR
Sbjct: 190 QEAVDYGLVDAVLTQR 205
>gi|125975222|ref|YP_001039132.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
thermocellum ATCC 27405]
gi|256003116|ref|ZP_05428108.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
thermocellum DSM 2360]
gi|281419196|ref|ZP_06250212.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
thermocellum JW20]
gi|385777706|ref|YP_005686871.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
thermocellum DSM 1313]
gi|419722741|ref|ZP_14249878.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
thermocellum AD2]
gi|419726242|ref|ZP_14253265.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
thermocellum YS]
gi|166201818|sp|A3DJ10.1|CLPP_CLOTH RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|125715447|gb|ABN53939.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
thermocellum ATCC 27405]
gi|255992807|gb|EEU02897.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
thermocellum DSM 2360]
gi|281407062|gb|EFB37324.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
thermocellum JW20]
gi|316939386|gb|ADU73420.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
thermocellum DSM 1313]
gi|380770294|gb|EIC04191.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
thermocellum YS]
gi|380781121|gb|EIC10782.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
thermocellum AD2]
Length = 194
Score = 256 bits (654), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 113/192 (58%), Positives = 156/192 (81%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
SL+P+V+E ++RGER+YDI+SRLLK+RII ++ IND TA +VVAQ+LFLE+E+P K I
Sbjct: 2 SLVPIVVEQTNRGERSYDIYSRLLKDRIIVLSDEINDVTASLVVAQMLFLEAEDPDKDIQ 61
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
+Y+NSPGG VTAG AIYDTMQY++ ++TIC+G AASMG+ LLA+G KG+R ALPNS IM
Sbjct: 62 LYINSPGGSVTAGFAIYDTMQYVKPDVSTICIGMAASMGAFLLAAGAKGKRFALPNSEIM 121
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQP GG GQA D+ IH +QI+++ + LN + + TGQ E I+++ +RD+FM+ EEAK
Sbjct: 122 IHQPLGGARGQATDIKIHAEQIIKIKNKLNRILSERTGQPFEKIERDTERDFFMSAEEAK 181
Query: 213 EFGIIDEVIDQR 224
+GI+DEV+++R
Sbjct: 182 AYGIVDEVMERR 193
>gi|406981668|gb|EKE03092.1| hypothetical protein ACD_20C00261G0002 [uncultured bacterium]
Length = 203
Score = 256 bits (654), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 117/188 (62%), Positives = 151/188 (80%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
+P+VIE SSRGER++DIFSRLL+ERII + P++D A+++VAQLL L+SENP K I +
Sbjct: 3 FVPVVIEQSSRGERSFDIFSRLLRERIIFLGTPVDDMVANLIVAQLLLLDSENPEKDIML 62
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VTAGLAIYDTMQ+IR+ +NTICLGQAASMG+ LLA+GT G+R ALP+S ++I
Sbjct: 63 YINSPGGSVTAGLAIYDTMQHIRADVNTICLGQAASMGAFLLAAGTPGKRMALPHSRVLI 122
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQP GG GQA D+ I +I R+ LN L KHTGQS + I+K+ DRDY MTP+EA E
Sbjct: 123 HQPLGGAQGQATDIEIQAAEIGRIKRTLNELLAKHTGQSFKKIEKDTDRDYIMTPQEALE 182
Query: 214 FGIIDEVI 221
+G++D+VI
Sbjct: 183 YGMVDKVI 190
>gi|398923822|ref|ZP_10660915.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
sp. GM48]
gi|398174659|gb|EJM62448.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
sp. GM48]
Length = 211
Score = 256 bits (654), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 112/192 (58%), Positives = 153/192 (79%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
L+PMV+E S+RGERAYDI+SRLLKER+I + GP+ D A+++ AQLLFLE+ENP K IH+
Sbjct: 19 LVPMVVEQSARGERAYDIYSRLLKERVIFLVGPVEDYMANLICAQLLFLEAENPDKDIHL 78
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VTAG++IYDTMQ+I+ + T C+GQA SMG+ LL +G G+R LPNS +MI
Sbjct: 79 YINSPGGSVTAGMSIYDTMQFIKPNVATTCIGQACSMGAFLLTAGAPGKRYCLPNSRVMI 138
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQP GG+ GQA D+ IH K+I+ + + LN L KH+G+++E I+++ +RD FM+ E A+E
Sbjct: 139 HQPLGGFQGQASDIEIHAKEILFIRERLNTLMAKHSGRTLEEIERDTNRDNFMSAEAARE 198
Query: 214 FGIIDEVIDQRP 225
+G+IDEVI QRP
Sbjct: 199 YGLIDEVITQRP 210
>gi|420238692|ref|ZP_14743075.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Rhizobium sp.
CF080]
gi|398085332|gb|EJL75992.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Rhizobium sp.
CF080]
Length = 210
Score = 256 bits (654), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 111/194 (57%), Positives = 157/194 (80%)
Query: 31 SFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKP 90
+ +L+PMV+E ++RGER+YDI+SRLLKERII + GP+ D A ++ AQLLFLE+ENP K
Sbjct: 8 AMALVPMVVEQTNRGERSYDIYSRLLKERIIFLTGPVEDYMASLICAQLLFLEAENPKKE 67
Query: 91 IHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNST 150
I +Y+NSPGG VTAG+AIYDTMQ+I+ ++T+C+GQAASMGSLLL +G KG R A PNS
Sbjct: 68 IALYINSPGGVVTAGMAIYDTMQFIKPAVSTLCIGQAASMGSLLLCAGEKGMRFATPNSR 127
Query: 151 IMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEE 210
IM+HQPSGG+ GQA D+ H + I+++ LN +Y KHTG+++E ++K +DRD+FMT +E
Sbjct: 128 IMVHQPSGGFQGQASDIERHARDILKMKRRLNEVYVKHTGRTLEEVEKTLDRDHFMTADE 187
Query: 211 AKEFGIIDEVIDQR 224
A+++G+ID+++ R
Sbjct: 188 AQDWGVIDKILTSR 201
>gi|51473702|ref|YP_067459.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia typhi
str. Wilmington]
gi|383752479|ref|YP_005427579.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia typhi
str. TH1527]
gi|383843314|ref|YP_005423817.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia typhi
str. B9991CWPP]
gi|60389549|sp|Q68WL5.1|CLPP_RICTY RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|51460014|gb|AAU03977.1| Caseinolytic protease [Rickettsia typhi str. Wilmington]
gi|380759122|gb|AFE54357.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia typhi
str. TH1527]
gi|380759961|gb|AFE55195.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia typhi
str. B9991CWPP]
Length = 201
Score = 256 bits (654), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 120/198 (60%), Positives = 156/198 (78%), Gaps = 1/198 (0%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
S IP+VIE +SRGERAYDI+SRLLKERII + + D A+++VAQLLFLE+ENP K I+
Sbjct: 2 SYIPVVIEQTSRGERAYDIYSRLLKERIIFVCSTVEDHMANLIVAQLLFLEAENPKKDIY 61
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
MY+NSPGG VTAGLAIYDTMQ+I+ + T+C+GQA SMGSLLL G G R +LP+S IM
Sbjct: 62 MYINSPGGVVTAGLAIYDTMQFIKPKVATLCIGQACSMGSLLLCGGEHGMRYSLPHSRIM 121
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQPSGGY GQA D+ IH ++ +++ LN LY KHT Q+++ I+K+M+RD FM+P EAK
Sbjct: 122 IHQPSGGYKGQATDIEIHARETLKIKKLLNELYSKHTEQALKHIEKSMERDNFMSPGEAK 181
Query: 213 EFGIIDEVIDQR-PMALV 229
+FG++D +I R MAL+
Sbjct: 182 KFGLVDNIISSRDAMALL 199
>gi|407781586|ref|ZP_11128804.1| protease subunit of ATP-dependent Clp protease [Oceanibaculum
indicum P24]
gi|407207803|gb|EKE77734.1| protease subunit of ATP-dependent Clp protease [Oceanibaculum
indicum P24]
Length = 214
Score = 256 bits (654), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 115/194 (59%), Positives = 155/194 (79%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E ++RGERAYDI+SRLLKERII + G ++D + ++ AQLLFLESENP+K I
Sbjct: 14 TLVPMVVEQTNRGERAYDIYSRLLKERIIFLTGQVHDGVSSLICAQLLFLESENPTKDIA 73
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
+Y+NSPGG VT+GLA+YDTMQYIR ++T+C+GQAASMGSLLL +G KG+R LP+S +M
Sbjct: 74 LYINSPGGVVTSGLAMYDTMQYIRPDVSTLCIGQAASMGSLLLTAGAKGKRFCLPHSRVM 133
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
+HQPSGG GQA D+ I ++I+ + LN +Y HTGQ IE I+K ++RD FM+ EEAK
Sbjct: 134 VHQPSGGAQGQATDIEIQAREILSIRARLNRIYADHTGQPIEEIEKTLERDRFMSAEEAK 193
Query: 213 EFGIIDEVIDQRPM 226
FG+IDEV+ +R +
Sbjct: 194 NFGLIDEVVSRRAI 207
>gi|310816210|ref|YP_003964174.1| Protease subunit of ATP-dependent Clp protease [Ketogulonicigenium
vulgare Y25]
gi|385233715|ref|YP_005795057.1| ATP-dependent Clp protease proteolytic subunit [Ketogulonicigenium
vulgare WSH-001]
gi|308754945|gb|ADO42874.1| Protease subunit of ATP-dependent Clp protease [Ketogulonicigenium
vulgare Y25]
gi|343462626|gb|AEM41061.1| ATP-dependent Clp protease proteolytic subunit [Ketogulonicigenium
vulgare WSH-001]
Length = 207
Score = 256 bits (654), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 114/193 (59%), Positives = 153/193 (79%)
Query: 32 FSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPI 91
+L+PMV+E +SRGERAYDIFSRLLKERII ++G + D + ++VAQLL LE+ENP K I
Sbjct: 9 MNLVPMVVEQTSRGERAYDIFSRLLKERIIFVSGVVEDGMSQLIVAQLLHLEAENPKKEI 68
Query: 92 HMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTI 151
MY+NSPGG VT+GL+IYDTMQYIR ++T+ +GQAASMGSLLLA+G G R +LPNS +
Sbjct: 69 SMYINSPGGVVTSGLSIYDTMQYIRPKVSTLVIGQAASMGSLLLAAGEAGMRYSLPNSRV 128
Query: 152 MIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEA 211
M+HQPSGG+ GQ D+ IH ++ ++ LN +Y KHTGQS E ++ ++RD F + EEA
Sbjct: 129 MVHQPSGGFQGQVTDIMIHARESEKLKRRLNEIYVKHTGQSYEAVEAALERDNFKSAEEA 188
Query: 212 KEFGIIDEVIDQR 224
KEFG+IDE++++R
Sbjct: 189 KEFGLIDEILEKR 201
>gi|164686707|ref|ZP_02210735.1| hypothetical protein CLOBAR_00302 [Clostridium bartlettii DSM
16795]
gi|164604097|gb|EDQ97562.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Clostridium bartlettii DSM 16795]
Length = 193
Score = 256 bits (654), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 116/193 (60%), Positives = 155/193 (80%)
Query: 32 FSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPI 91
+L+P V+E + RGERAYDI+SRLLK+RII ++ +ND TA +VVAQLLFLE+E+P K I
Sbjct: 1 MALVPTVVEQTGRGERAYDIYSRLLKDRIIFLSDEVNDTTASLVVAQLLFLEAEDPDKDI 60
Query: 92 HMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTI 151
H+Y+NSPGG VTAG+AIYDTMQYI+ ++TIC+G AASMG+ LL +G KG+R ALPNS I
Sbjct: 61 HLYINSPGGSVTAGMAIYDTMQYIKPDVSTICIGMAASMGAFLLNAGAKGKRFALPNSEI 120
Query: 152 MIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEA 211
MIHQP GG GQA D+ IH K I+++ + LN + + TGQ IE IQ++ +RD FM+ +EA
Sbjct: 121 MIHQPLGGAKGQATDIEIHAKWILKIKERLNKILSERTGQPIEKIQEDTERDNFMSAQEA 180
Query: 212 KEFGIIDEVIDQR 224
KE+G+IDEVI+++
Sbjct: 181 KEYGLIDEVIEKK 193
>gi|78357263|ref|YP_388712.1| ATP-dependent Clp protease proteolytic subunit [Desulfovibrio
alaskensis G20]
gi|90101407|sp|Q30Z79.1|CLPP_DESDG RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|78219668|gb|ABB39017.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Desulfovibrio
alaskensis G20]
Length = 200
Score = 256 bits (654), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 118/190 (62%), Positives = 148/190 (77%)
Query: 35 IPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHMY 94
IPMVIE + R ERAYDI+SRLLK+RII + P++D+ A ++ AQLLFLESENP K I++Y
Sbjct: 3 IPMVIESTGRAERAYDIYSRLLKDRIILLGTPVDDNVASLICAQLLFLESENPEKEIYLY 62
Query: 95 LNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMIH 154
+NSPGG VTAGLAIYDTMQYI +P+ T+C+GQAASMG+ LLA+G G R ALPNS IMIH
Sbjct: 63 INSPGGVVTAGLAIYDTMQYISAPVATLCMGQAASMGAFLLAAGQPGMRFALPNSRIMIH 122
Query: 155 QPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKEF 214
QP GG GQA D+ I ++I+R+ D LN + +HTGQ +E I ++ DRDYFM PE AK F
Sbjct: 123 QPMGGAQGQATDIDIQAREILRLKDRLNEILSRHTGQPLEKIVEHTDRDYFMGPENAKNF 182
Query: 215 GIIDEVIDQR 224
GIID ++ R
Sbjct: 183 GIIDRILTSR 192
>gi|169824905|ref|YP_001692516.1| ATP-dependent protease Clp proteolytic subunit [Finegoldia magna
ATCC 29328]
gi|297587291|ref|ZP_06945936.1| ATP-dependent Clp protease proteolytic subunit [Finegoldia magna
ATCC 53516]
gi|302379561|ref|ZP_07268046.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Finegoldia
magna ACS-171-V-Col3]
gi|303234189|ref|ZP_07320835.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Finegoldia
magna BVS033A4]
gi|417926693|ref|ZP_12570084.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Finegoldia
magna SY403409CC001050417]
gi|167831710|dbj|BAG08626.1| ATP-dependent protease Clp proteolytic subunit [Finegoldia magna
ATCC 29328]
gi|297575272|gb|EFH93991.1| ATP-dependent Clp protease proteolytic subunit [Finegoldia magna
ATCC 53516]
gi|302312468|gb|EFK94464.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Finegoldia
magna ACS-171-V-Col3]
gi|302494730|gb|EFL54490.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Finegoldia
magna BVS033A4]
gi|341588445|gb|EGS31843.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Finegoldia
magna SY403409CC001050417]
Length = 195
Score = 256 bits (654), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 115/189 (60%), Positives = 151/189 (79%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
SL+PMV+E S+RGER+YDIFSRLLKERII + G +ND A +V+AQLLFLESE+P K I
Sbjct: 3 SLVPMVVEQSNRGERSYDIFSRLLKERIIFVTGEVNDQMADLVIAQLLFLESEDPKKDIQ 62
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
+Y+NSPGG V+AGLAIYDTMQY++ ++TIC+G AASMG++LL SG KG+R ALPN+ +
Sbjct: 63 LYINSPGGSVSAGLAIYDTMQYVKPDVSTICVGMAASMGAILLTSGAKGKRYALPNADTL 122
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQP GG GQA D+ IH K I++ + LN + + TGQ +E I+++ DRD+ +T EEAK
Sbjct: 123 IHQPLGGAQGQASDIEIHAKNILKKRELLNKILSERTGQPLEKIERDTDRDFILTAEEAK 182
Query: 213 EFGIIDEVI 221
E+G+IDEVI
Sbjct: 183 EYGLIDEVI 191
>gi|51246390|ref|YP_066274.1| ATP-dependent Clp protease, proteolytic subunit (ClpP)
[Desulfotalea psychrophila LSv54]
gi|50877427|emb|CAG37267.1| probable ATP-dependent Clp protease, proteolytic subunit (ClpP)
[Desulfotalea psychrophila LSv54]
Length = 213
Score = 256 bits (654), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 116/193 (60%), Positives = 156/193 (80%)
Query: 32 FSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPI 91
+LIPMV+E + RGER+YDI+SRLLKERII + +NDD A+V+VAQLLFLE+E+P K I
Sbjct: 11 MNLIPMVVEQTPRGERSYDIYSRLLKERIIFLGSGVNDDVANVIVAQLLFLEAEDPEKDI 70
Query: 92 HMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTI 151
Y+NSPGG VTAG+AIYDTMQYI+ I T+C+GQAASMG++LLA+GT G+R ALPNS I
Sbjct: 71 TFYINSPGGSVTAGMAIYDTMQYIKCDIATLCMGQAASMGAVLLAAGTAGKRYALPNSRI 130
Query: 152 MIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEA 211
MIHQP GG+ GQA D+ IHTK+I+R+ LN + HTG++++ I+ + +RD FM+ EA
Sbjct: 131 MIHQPLGGFQGQATDIEIHTKEILRIRKDLNNILAHHTGKTLKKIESDTERDNFMSSVEA 190
Query: 212 KEFGIIDEVIDQR 224
+++G+IDEV+ +R
Sbjct: 191 QKYGLIDEVLVKR 203
>gi|421591189|ref|ZP_16036087.1| ATP-dependent Clp protease proteolytic subunit [Rhizobium sp. Pop5]
gi|403703410|gb|EJZ19646.1| ATP-dependent Clp protease proteolytic subunit [Rhizobium sp. Pop5]
Length = 203
Score = 256 bits (654), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 111/194 (57%), Positives = 153/194 (78%)
Query: 31 SFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKP 90
+ L+PMV+E SSRGER++DI+SRLL+ERII +NG +ND + +V AQLLFLE+ENP KP
Sbjct: 4 AMQLVPMVVEQSSRGERSFDIYSRLLRERIIFLNGEVNDTVSALVCAQLLFLEAENPKKP 63
Query: 91 IHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNST 150
I++Y+NSPGG VT+G A+YDTM++IR+P++T+C+G A SMGS LL +G GER ALPN++
Sbjct: 64 INLYINSPGGAVTSGFAMYDTMRFIRAPVHTLCMGTARSMGSFLLMAGEPGERAALPNTS 123
Query: 151 IMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEE 210
I+IHQPSGG+ GQA DM IH ++I++ + LY +H G+S E ++ MDRD FMT EE
Sbjct: 124 ILIHQPSGGFQGQASDMLIHAEEILKTKQRMTRLYAEHCGRSYEDFERGMDRDRFMTAEE 183
Query: 211 AKEFGIIDEVIDQR 224
A E+G+ID ++ R
Sbjct: 184 ALEWGLIDRILKVR 197
>gi|395649556|ref|ZP_10437406.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
extremaustralis 14-3 substr. 14-3b]
Length = 211
Score = 256 bits (654), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 111/192 (57%), Positives = 155/192 (80%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
L+PMV+E S+RGERAYDI+SRLLKER+I + GP+ D A+++ AQLLFLE+ENP K IH+
Sbjct: 19 LVPMVVEQSARGERAYDIYSRLLKERVIFLVGPVEDYMANLICAQLLFLEAENPDKDIHL 78
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VTAG++IYDTMQ+I+ ++T C+GQA SMG+ LL +G G+R LPNS +MI
Sbjct: 79 YINSPGGSVTAGMSIYDTMQFIKPNVSTTCIGQACSMGAFLLTAGAHGKRYCLPNSRVMI 138
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQP GG+ GQA D+ IH K+I+ + + LN L KH+G+++E I+++ +RD FM+ E A+E
Sbjct: 139 HQPLGGFQGQASDIEIHAKEILFIRERLNTLMAKHSGRTLEEIERDTNRDNFMSAEMARE 198
Query: 214 FGIIDEVIDQRP 225
+G+IDEVI++RP
Sbjct: 199 YGLIDEVIEKRP 210
>gi|118602249|ref|YP_903464.1| ATP-dependent Clp protease proteolytic subunit [Candidatus Ruthia
magnifica str. Cm (Calyptogena magnifica)]
gi|166214707|sp|A1AVN6.1|CLPP_RUTMC RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|118567188|gb|ABL01993.1| ATP-dependent Clp protease proteolytic subunit ClpP [Candidatus
Ruthia magnifica str. Cm (Calyptogena magnifica)]
Length = 198
Score = 256 bits (654), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 117/190 (61%), Positives = 155/190 (81%)
Query: 35 IPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHMY 94
IP+V+E S+RGERAYDI+SRLLKERII + GPI D A+VVVAQLLFLESENP + IH+Y
Sbjct: 9 IPIVVEQSARGERAYDIYSRLLKERIIFLVGPIEDYMANVVVAQLLFLESENPDQDIHLY 68
Query: 95 LNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMIH 154
+NSPGG V+AGLAIYDTMQ+I+ ++T+C+GQAASMG+LLL +G K +R ALPN MIH
Sbjct: 69 INSPGGLVSAGLAIYDTMQFIKPDVSTLCIGQAASMGALLLTAGAKDKRFALPNVRCMIH 128
Query: 155 QPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKEF 214
QP GG+SGQA D+ IH ++I++V + LN ++ HT Q+I+ IQK+ DRD FM+ EA ++
Sbjct: 129 QPLGGFSGQASDIDIHAQEILKVREKLNQIFKLHTSQTIKTIQKDTDRDNFMSANEATKY 188
Query: 215 GIIDEVIDQR 224
G+ID+V+ +R
Sbjct: 189 GLIDKVLAKR 198
>gi|398996366|ref|ZP_10699223.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
sp. GM21]
gi|398126897|gb|EJM16318.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
sp. GM21]
Length = 211
Score = 256 bits (654), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 111/192 (57%), Positives = 153/192 (79%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
L+PMV+E S+RGERAYDI+SRLLKER+I + GP+ D A+++ AQLLFLE+ENP K IH+
Sbjct: 19 LVPMVVEQSARGERAYDIYSRLLKERVIFLVGPVEDYMANLICAQLLFLEAENPDKDIHL 78
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VTAG++IYDTMQ+I+ ++T C+GQA SMG+ LL +G G+R LPNS +MI
Sbjct: 79 YINSPGGSVTAGMSIYDTMQFIKPNVSTTCIGQACSMGAFLLTAGAAGKRYCLPNSRVMI 138
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQP GG+ GQA D+ IH K+I+ + + LN L KH+G ++E I+++ +RD FM+ E A++
Sbjct: 139 HQPLGGFQGQASDIEIHAKEILFIRERLNTLMAKHSGHTLEEIERDTNRDNFMSAEAARD 198
Query: 214 FGIIDEVIDQRP 225
+G+IDEVI QRP
Sbjct: 199 YGLIDEVISQRP 210
>gi|60389557|sp|Q6AK59.2|CLPP_DESPS RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
Length = 203
Score = 256 bits (654), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 116/193 (60%), Positives = 156/193 (80%)
Query: 32 FSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPI 91
+LIPMV+E + RGER+YDI+SRLLKERII + +NDD A+V+VAQLLFLE+E+P K I
Sbjct: 1 MNLIPMVVEQTPRGERSYDIYSRLLKERIIFLGSGVNDDVANVIVAQLLFLEAEDPEKDI 60
Query: 92 HMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTI 151
Y+NSPGG VTAG+AIYDTMQYI+ I T+C+GQAASMG++LLA+GT G+R ALPNS I
Sbjct: 61 TFYINSPGGSVTAGMAIYDTMQYIKCDIATLCMGQAASMGAVLLAAGTAGKRYALPNSRI 120
Query: 152 MIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEA 211
MIHQP GG+ GQA D+ IHTK+I+R+ LN + HTG++++ I+ + +RD FM+ EA
Sbjct: 121 MIHQPLGGFQGQATDIEIHTKEILRIRKDLNNILAHHTGKTLKKIESDTERDNFMSSVEA 180
Query: 212 KEFGIIDEVIDQR 224
+++G+IDEV+ +R
Sbjct: 181 QKYGLIDEVLVKR 193
>gi|298707749|emb|CBJ26066.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Ectocarpus
siliculosus]
Length = 243
Score = 256 bits (654), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 116/210 (55%), Positives = 161/210 (76%), Gaps = 8/210 (3%)
Query: 24 SAQISARSFS--------LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVV 75
+++I+ R++S +PMV+E + RGERAYDI+SRLL+ERIIC++GP+ + +V
Sbjct: 24 NSRIAFRAYSSTRRVEMNYLPMVLESTPRGERAYDIYSRLLRERIICMHGPVTEQMTSLV 83
Query: 76 VAQLLFLESENPSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLL 135
AQLLFLESENP KPI+MY+NSPGG VTAGLAIYDTMQY+R I TIC+GQAASMGSLLL
Sbjct: 84 TAQLLFLESENPDKPINMYINSPGGVVTAGLAIYDTMQYVRPEICTICMGQAASMGSLLL 143
Query: 136 ASGTKGERRALPNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEV 195
+G+ R LPN+ +M+HQPSGG +G A D+ I ++I++ LN +Y +HTG+ +
Sbjct: 144 TAGSPEMRFILPNAKVMLHQPSGGANGMAADIAIMAEEIIKTRARLNDIYAEHTGREVGE 203
Query: 196 IQKNMDRDYFMTPEEAKEFGIIDEVIDQRP 225
I+K MDRD++MT +EA EFG++D+++ +RP
Sbjct: 204 IEKVMDRDFYMTAQEAIEFGVVDKILKKRP 233
>gi|254525030|ref|ZP_05137085.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Stenotrophomonas sp. SKA14]
gi|219722621|gb|EED41146.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Stenotrophomonas sp. SKA14]
Length = 196
Score = 256 bits (654), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 116/189 (61%), Positives = 154/189 (81%)
Query: 37 MVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHMYLN 96
MV+E +SRGERAYDI+SRLLKER+I + GPI+D A+VVVAQLLFLESENP K I++Y+N
Sbjct: 1 MVVEQTSRGERAYDIYSRLLKERLIFLVGPIDDHMANVVVAQLLFLESENPEKDINIYIN 60
Query: 97 SPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMIHQP 156
SPGG VTAG+AIYDTMQYI+ ++T C+GQAASMG+LLLA+G G+R ALPNS +MIHQP
Sbjct: 61 SPGGVVTAGMAIYDTMQYIKPNVSTTCIGQAASMGALLLAAGEAGKRYALPNSRVMIHQP 120
Query: 157 SGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKEFGI 216
GGY GQA D+ IH ++I+ + LN + KHTGQS+E I ++ +RD F + EA+ +G+
Sbjct: 121 LGGYQGQATDIDIHAREILTLRSRLNEVLAKHTGQSLETIARDTERDNFKSAFEAQAYGL 180
Query: 217 IDEVIDQRP 225
+D+V+++RP
Sbjct: 181 VDQVLERRP 189
>gi|294635324|ref|ZP_06713821.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Edwardsiella
tarda ATCC 23685]
gi|291091300|gb|EFE23861.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Edwardsiella
tarda ATCC 23685]
Length = 194
Score = 256 bits (654), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 110/192 (57%), Positives = 155/192 (80%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E +SRGER+YDIFSRLLKERII + G + D A+++VAQ+LFLE+ENP K IH
Sbjct: 2 ALVPMVVEQTSRGERSYDIFSRLLKERIIFLTGQVEDHMANLIVAQMLFLEAENPEKDIH 61
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
+Y+NSPGG +TAG++IYDTMQ+I+ ++TIC+GQA SMGS LLA+G +G+R LPNS +M
Sbjct: 62 LYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQACSMGSFLLAAGAQGKRFCLPNSRVM 121
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQP GG+ GQA D+ IH K+I+ + +N L KH+GQ +EVI+++ +RD FM+ +EA
Sbjct: 122 IHQPLGGFQGQATDIEIHAKEILSIKARMNTLMAKHSGQPLEVIERDTERDRFMSAQEAV 181
Query: 213 EFGIIDEVIDQR 224
++G++D V+ QR
Sbjct: 182 DYGLVDAVLTQR 193
>gi|320530213|ref|ZP_08031283.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Selenomonas
artemidis F0399]
gi|320137646|gb|EFW29558.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Selenomonas
artemidis F0399]
Length = 199
Score = 256 bits (654), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 123/211 (58%), Positives = 160/211 (75%), Gaps = 12/211 (5%)
Query: 37 MVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHMYLN 96
MV+E+SSRGERAYDI+SRLLKERII + GPI+D+ A+VVVAQ+LFLESE+P K IH+Y+N
Sbjct: 1 MVVENSSRGERAYDIYSRLLKERIIFLGGPIDDNVANVVVAQMLFLESEDPDKDIHLYIN 60
Query: 97 SPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMIHQP 156
SPGG VTAGLAIYDTMQYI+ ++TIC+GQAASMGS+LL +G KG+R ALP++ IMIHQP
Sbjct: 61 SPGGVVTAGLAIYDTMQYIKPDVSTICIGQAASMGSILLTAGAKGKRYALPHARIMIHQP 120
Query: 157 SGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKEFGI 216
GG GQ+ D+ I K+I+R+ + N + +HTGQ + I + +RD FM+ EEAK +G+
Sbjct: 121 LGGAQGQSTDIQIQAKEILRLREVGNEILARHTGQDTDKINVDTERDNFMSAEEAKAYGL 180
Query: 217 IDEVIDQRPMALVTDAVGREGKEGKEGKEKG 247
IDEV+ + P A KE K+KG
Sbjct: 181 IDEVVVRPPAA------------SKESKDKG 199
>gi|89073230|ref|ZP_01159760.1| ATP-dependent Clp protease proteolytic subunit [Photobacterium sp.
SKA34]
gi|90579278|ref|ZP_01235088.1| ATP-dependent Clp protease proteolytic subunit [Photobacterium
angustum S14]
gi|89050940|gb|EAR56404.1| ATP-dependent Clp protease proteolytic subunit [Photobacterium sp.
SKA34]
gi|90440111|gb|EAS65292.1| ATP-dependent Clp protease proteolytic subunit [Photobacterium
angustum S14]
Length = 207
Score = 256 bits (654), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 111/192 (57%), Positives = 153/192 (79%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E +SRGER+YDI+SRLLKER+I + G + D A++VVAQLLFLESENP K I
Sbjct: 15 ALVPMVVEQTSRGERSYDIYSRLLKERVIFLTGQVEDHMANLVVAQLLFLESENPDKDIF 74
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
+Y+NSPGG VTAG++IYDTMQ+I+ ++T+C+GQA SMG+ LLA G KG+R LPNS +M
Sbjct: 75 LYINSPGGSVTAGMSIYDTMQFIKPNVSTVCMGQACSMGAFLLAGGAKGKRYCLPNSRVM 134
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQP GG+ GQA D+ IH ++I+ + LN L +HTGQ +EV++++ DRD FM+ E+A
Sbjct: 135 IHQPLGGFQGQASDIQIHAQEILTIKQRLNGLLAEHTGQPLEVVERDTDRDNFMSAEQAV 194
Query: 213 EFGIIDEVIDQR 224
E+G++D V+ QR
Sbjct: 195 EYGLVDAVLSQR 206
>gi|429209761|ref|ZP_19200988.1| ATP-dependent Clp protease proteolytic subunit [Rhodobacter sp.
AKP1]
gi|428187304|gb|EKX55889.1| ATP-dependent Clp protease proteolytic subunit [Rhodobacter sp.
AKP1]
Length = 210
Score = 256 bits (653), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 112/192 (58%), Positives = 156/192 (81%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E +SRGERAYDI+SR+LKERII ++GP++D + ++ AQLLFLE+ENPSK I
Sbjct: 11 TLVPMVVEQTSRGERAYDIYSRMLKERIIFLSGPVHDGMSSLICAQLLFLEAENPSKEIA 70
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
MY+NSPGG VT+GL+IYDTMQYIR ++T+ +GQAASMGSLLL +G KG R +LPNS +M
Sbjct: 71 MYINSPGGVVTSGLSIYDTMQYIRPKVSTLVIGQAASMGSLLLTAGGKGMRFSLPNSRVM 130
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
+HQPSGGY GQA D+ IH ++ ++ LN +Y +HTGQ +E ++ ++RD FM+ E+AK
Sbjct: 131 VHQPSGGYQGQATDIMIHARETEKLKRRLNEIYVRHTGQDLETVEAALERDNFMSAEDAK 190
Query: 213 EFGIIDEVIDQR 224
+G+IDE+++ R
Sbjct: 191 AWGLIDEILESR 202
>gi|160898086|ref|YP_001563668.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Delftia
acidovorans SPH-1]
gi|333915639|ref|YP_004489371.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Delftia sp.
Cs1-4]
gi|160363670|gb|ABX35283.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Delftia
acidovorans SPH-1]
gi|333745839|gb|AEF91016.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Delftia sp.
Cs1-4]
Length = 202
Score = 256 bits (653), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 113/198 (57%), Positives = 157/198 (79%)
Query: 27 ISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESEN 86
+ + +IPMVIE S RGER+YDI+SRLLK+R+I + GP+ND TA++VVAQLLFLESEN
Sbjct: 4 LETQGLGMIPMVIEQSGRGERSYDIYSRLLKDRVIFLVGPVNDQTANLVVAQLLFLESEN 63
Query: 87 PSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRAL 146
P K I Y+NSPGG V+AGLAI+DTM +I+ ++T+C G AASMG+ LLA+GTKG+R AL
Sbjct: 64 PDKDISFYINSPGGSVSAGLAIFDTMNFIKPDVSTLCTGIAASMGAFLLAAGTKGKRFAL 123
Query: 147 PNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFM 206
PNS +MIHQP GG GQA ++ IH ++I++ + LN + + TGQ +E IQ + +RDYF+
Sbjct: 124 PNSQVMIHQPLGGMQGQATEIEIHAREILKTRERLNKILAERTGQPLEKIQHDTERDYFL 183
Query: 207 TPEEAKEFGIIDEVIDQR 224
+ EEAK++G++D+VI++R
Sbjct: 184 SAEEAKDYGLVDQVINKR 201
>gi|145589117|ref|YP_001155714.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Polynucleobacter necessarius subsp. asymbioticus
QLW-P1DMWA-1]
gi|145047523|gb|ABP34150.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Polynucleobacter necessarius subsp. asymbioticus
QLW-P1DMWA-1]
Length = 209
Score = 256 bits (653), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 115/202 (56%), Positives = 157/202 (77%)
Query: 24 SAQISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLE 83
S + + L+PMVIE S RGERAYDI+SRLL+ER++ + G +ND TA++V+AQLLFLE
Sbjct: 8 SENLEPKGLGLVPMVIETSGRGERAYDIYSRLLRERVVFLVGEVNDQTANLVIAQLLFLE 67
Query: 84 SENPSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGER 143
SENP K I +Y+NSPGG V+AGLAIYDTMQ+I+ ++T+C+G AASMG+ LL +G KG+R
Sbjct: 68 SENPDKDISLYINSPGGSVSAGLAIYDTMQFIKPHVSTLCMGMAASMGAFLLCAGEKGKR 127
Query: 144 RALPNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRD 203
ALPNS +MIHQP GG GQA D+ I ++I+ + + LN + TGQSI+ I K+ DRD
Sbjct: 128 YALPNSRVMIHQPLGGARGQASDIEIQAREILYLRERLNKILADRTGQSIDTIAKDTDRD 187
Query: 204 YFMTPEEAKEFGIIDEVIDQRP 225
FM+ E+A+E+G+ID+VI++RP
Sbjct: 188 NFMSAEQAREYGLIDKVIEKRP 209
>gi|386717297|ref|YP_006183623.1| ATP-dependent Clp protease proteolytic subunit [Stenotrophomonas
maltophilia D457]
gi|384076859|emb|CCH11444.1| ATP-dependent Clp protease proteolytic subunit [Stenotrophomonas
maltophilia D457]
Length = 196
Score = 256 bits (653), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 116/189 (61%), Positives = 154/189 (81%)
Query: 37 MVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHMYLN 96
MV+E +SRGERAYDI+SRLLKER+I + GPI+D A+VVVAQLLFLESENP K I++Y+N
Sbjct: 1 MVVEQTSRGERAYDIYSRLLKERLIFLVGPIDDHMANVVVAQLLFLESENPEKDINIYIN 60
Query: 97 SPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMIHQP 156
SPGG VTAG+AIYDTMQYI+ ++T C+GQAASMG+LLLA+G G+R ALPNS +MIHQP
Sbjct: 61 SPGGVVTAGMAIYDTMQYIKPNVSTTCIGQAASMGALLLAAGEAGKRYALPNSRVMIHQP 120
Query: 157 SGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKEFGI 216
GGY GQA D+ IH ++I+ + LN + KHTGQS+E I ++ +RD F + EA+ +G+
Sbjct: 121 LGGYQGQATDIDIHAREILTLRSRLNEILAKHTGQSLETIARDTERDNFKSAFEAQAYGL 180
Query: 217 IDEVIDQRP 225
+D+V+++RP
Sbjct: 181 VDQVLERRP 189
>gi|302390303|ref|YP_003826124.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Thermosediminibacter oceani DSM 16646]
gi|302200931|gb|ADL08501.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Thermosediminibacter oceani DSM 16646]
Length = 200
Score = 256 bits (653), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 118/196 (60%), Positives = 156/196 (79%)
Query: 32 FSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPI 91
SL+P+VIE ++RGERAYDI+SRLLK+RI+ I PI+D A +V+AQLLFLESE+P K I
Sbjct: 1 MSLVPIVIEQTNRGERAYDIYSRLLKDRIVFIGTPIDDSIASLVIAQLLFLESEDPDKDI 60
Query: 92 HMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTI 151
++Y+NSPGG VTAGLAIYDTMQYI+ ++TIC+G AASMG++LLA G G+R ALPNS I
Sbjct: 61 YLYINSPGGSVTAGLAIYDTMQYIKPDVSTICIGMAASMGAVLLAGGAPGKRLALPNSRI 120
Query: 152 MIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEA 211
MIHQP GG G+A D+ H K+I+R+ + LN + KHT Q +E I+++ +RDYFM+ EA
Sbjct: 121 MIHQPWGGVQGRALDIETHAKEILRLREVLNEILVKHTKQPLERIERDTERDYFMSAVEA 180
Query: 212 KEFGIIDEVIDQRPMA 227
K++G+IDEVI +R A
Sbjct: 181 KQYGLIDEVIYKRTKA 196
>gi|258542726|ref|YP_003188159.1| ATP-dependent Clp protease proteolytic subunit [Acetobacter
pasteurianus IFO 3283-01]
gi|384042647|ref|YP_005481391.1| Clp protease proteolytic subunit ClpP [Acetobacter pasteurianus IFO
3283-12]
gi|384051164|ref|YP_005478227.1| Clp protease proteolytic subunit ClpP [Acetobacter pasteurianus IFO
3283-03]
gi|384054272|ref|YP_005487366.1| Clp protease proteolytic subunit ClpP [Acetobacter pasteurianus IFO
3283-07]
gi|384057506|ref|YP_005490173.1| Clp protease proteolytic subunit ClpP [Acetobacter pasteurianus IFO
3283-22]
gi|384060147|ref|YP_005499275.1| Clp protease proteolytic subunit ClpP [Acetobacter pasteurianus IFO
3283-26]
gi|384063439|ref|YP_005484081.1| Clp protease proteolytic subunit ClpP [Acetobacter pasteurianus IFO
3283-32]
gi|384119449|ref|YP_005502073.1| Clp protease proteolytic subunit ClpP [Acetobacter pasteurianus IFO
3283-01-42C]
gi|256633804|dbj|BAH99779.1| Clp protease proteolytic subunit ClpP [Acetobacter pasteurianus IFO
3283-01]
gi|256636863|dbj|BAI02832.1| Clp protease proteolytic subunit ClpP [Acetobacter pasteurianus IFO
3283-03]
gi|256639916|dbj|BAI05878.1| Clp protease proteolytic subunit ClpP [Acetobacter pasteurianus IFO
3283-07]
gi|256642972|dbj|BAI08927.1| Clp protease proteolytic subunit ClpP [Acetobacter pasteurianus IFO
3283-22]
gi|256646027|dbj|BAI11975.1| Clp protease proteolytic subunit ClpP [Acetobacter pasteurianus IFO
3283-26]
gi|256649080|dbj|BAI15021.1| Clp protease proteolytic subunit ClpP [Acetobacter pasteurianus IFO
3283-32]
gi|256652067|dbj|BAI18001.1| Clp protease proteolytic subunit ClpP [Acetobacter pasteurianus IFO
3283-01-42C]
gi|256655124|dbj|BAI21051.1| Clp protease proteolytic subunit ClpP [Acetobacter pasteurianus IFO
3283-12]
Length = 220
Score = 256 bits (653), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 114/191 (59%), Positives = 155/191 (81%)
Query: 31 SFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKP 90
S +L+PMV+E +SRGERA+DI+SRLL+ERII + GP+ D A ++ AQLL+LES NP+K
Sbjct: 14 SNALVPMVVEQTSRGERAFDIYSRLLQERIIFLTGPVYDQVASLISAQLLYLESVNPNKE 73
Query: 91 IHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNST 150
I Y+NSPGG V+AGLAIYDTMQYIRSP++T+C+GQAASMGSLLLA G KG R ALPN+
Sbjct: 74 ISFYINSPGGVVSAGLAIYDTMQYIRSPVSTVCIGQAASMGSLLLAGGEKGRRFALPNAR 133
Query: 151 IMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEE 210
+M+HQPSGG GQA D+ I ++I+ + LN +Y +HTG+++E I++ ++RD +M+ +E
Sbjct: 134 VMVHQPSGGAQGQASDIEIQAREILIIRQKLNEIYREHTGRTLEEIEQKLERDTYMSAQE 193
Query: 211 AKEFGIIDEVI 221
A+ FGI+DEVI
Sbjct: 194 AQSFGIVDEVI 204
>gi|209546440|ref|YP_002278330.1| ATP-dependent Clp protease proteolytic subunit [Rhizobium
leguminosarum bv. trifolii WSM2304]
gi|209539297|gb|ACI59230.1| Endopeptidase Clp [Rhizobium leguminosarum bv. trifolii WSM2304]
Length = 203
Score = 256 bits (653), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 111/194 (57%), Positives = 155/194 (79%)
Query: 31 SFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKP 90
+ L+PMV+E SSRGER++DI+SRLL+ERI+ +NG +ND + +V AQLLFLE+ENP KP
Sbjct: 4 AMQLVPMVVEQSSRGERSFDIYSRLLRERIVFLNGEVNDTVSALVCAQLLFLEAENPKKP 63
Query: 91 IHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNST 150
I++Y+NSPGG VT+GLA+YDTM+YIR+P++T+C+G A SMGS LL +G GER ALPN++
Sbjct: 64 IYLYINSPGGVVTSGLAMYDTMRYIRAPVHTLCMGTARSMGSFLLMAGEPGERAALPNAS 123
Query: 151 IMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEE 210
I+IHQPSGG+ GQA DM IH ++I++ + LY +H G+S E ++ MDRD FMT +E
Sbjct: 124 ILIHQPSGGFQGQATDMQIHAEEILKTKQRMTRLYAEHCGRSYEDFERAMDRDRFMTSQE 183
Query: 211 AKEFGIIDEVIDQR 224
A E+G+ID+++ R
Sbjct: 184 ALEWGLIDKIMQLR 197
>gi|85373054|ref|YP_457116.1| ATP-dependent Clp protease proteolytic subunit [Erythrobacter
litoralis HTCC2594]
gi|84786137|gb|ABC62319.1| ATP-dependent Clp protease [Erythrobacter litoralis HTCC2594]
Length = 234
Score = 256 bits (653), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 113/193 (58%), Positives = 152/193 (78%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+P+V+E +SRGER++DIFSRLL+ERI+ + G + D A ++ AQLLFLESENPSKPI
Sbjct: 26 ALVPVVVEQTSRGERSFDIFSRLLRERIVFVTGQVEDGMASLITAQLLFLESENPSKPIS 85
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
MY+NSPGG VTAG+AI+DTMQYI+ ++T+C+GQAASMGS LLA+G G R ALPN+ IM
Sbjct: 86 MYINSPGGVVTAGMAIHDTMQYIKPKVSTVCMGQAASMGSFLLAAGEPGMRVALPNARIM 145
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
+HQPSGG G A D+ I ++I+R+ +N LY K+TGQ + I+K MDRD F+ EEA
Sbjct: 146 VHQPSGGARGMASDIEIQAREILRIRKRMNDLYVKYTGQKLADIEKAMDRDTFLEAEEAM 205
Query: 213 EFGIIDEVIDQRP 225
+FG++D+V + RP
Sbjct: 206 KFGLVDKVFETRP 218
>gi|54309798|ref|YP_130818.1| ATP-dependent Clp protease proteolytic subunit [Photobacterium
profundum SS9]
gi|46914236|emb|CAG21016.1| putative gi|27363512|ref|NP_759040.1| ATP-dependent Clp protease,
proteolytic subunit [Vibrio vulnificus CMCP6]
[Photobacterium profundum SS9]
Length = 207
Score = 256 bits (653), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 112/192 (58%), Positives = 153/192 (79%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E +SRGER+YDI+SRLLKER+I + G + D A++VVAQLLFLESENP K I
Sbjct: 15 ALVPMVVEQTSRGERSYDIYSRLLKERVIFLTGQVEDHMANLVVAQLLFLESENPDKDIF 74
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
+Y+NSPGG VTAG++IYDTMQ+I+ ++T+C+GQA SMG+ LLA G KG+R LPNS +M
Sbjct: 75 LYINSPGGSVTAGMSIYDTMQFIKPNVSTVCMGQACSMGAFLLAGGAKGKRYCLPNSRVM 134
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQP GG+ GQA D+ IH K+I+ + LN+L KHTGQ +EV++ + DRD FM+ ++A
Sbjct: 135 IHQPLGGFQGQASDIQIHAKEILTIKHRLNSLLAKHTGQPLEVVEGDTDRDNFMSADQAV 194
Query: 213 EFGIIDEVIDQR 224
E+G++D V+ QR
Sbjct: 195 EYGLVDSVLTQR 206
>gi|373467005|ref|ZP_09558311.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Haemophilus sp. oral taxon 851 str. F0397]
gi|371759511|gb|EHO48238.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Haemophilus sp. oral taxon 851 str. F0397]
Length = 193
Score = 256 bits (653), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 114/192 (59%), Positives = 156/192 (81%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
S+IPMV+E +SRGER+YDI+SRLLKER+I ++G + D A+++VAQLLFLESE+P+K I+
Sbjct: 2 SVIPMVVEQTSRGERSYDIYSRLLKERVIFLSGEVEDRMANLIVAQLLFLESEDPTKDIN 61
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
+Y+NSPGG VTAG+AIYDTMQ+I+ I T+C+GQA SMG+ LLA GT G+R ALPN+ +M
Sbjct: 62 IYINSPGGSVTAGMAIYDTMQFIKPDIRTLCIGQACSMGAFLLAGGTAGKRAALPNARVM 121
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQP GG+ GQA D+ IH ++I+++ LN HTGQSIE I+K+ DRD FM+ EEAK
Sbjct: 122 IHQPLGGFRGQASDIQIHAQEILKIKHTLNDRLAFHTGQSIERIEKDTDRDNFMSAEEAK 181
Query: 213 EFGIIDEVIDQR 224
+G++DE++ +R
Sbjct: 182 AYGLVDEILIKR 193
>gi|425778443|gb|EKV16570.1| ATP-dependent Clp protease proteolytic subunit [Penicillium
digitatum PHI26]
gi|425784275|gb|EKV22063.1| ATP-dependent Clp protease proteolytic subunit [Penicillium
digitatum Pd1]
Length = 258
Score = 256 bits (653), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 128/226 (56%), Positives = 166/226 (73%), Gaps = 12/226 (5%)
Query: 23 PSAQISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFL 82
PS RS++ P V E G YDIFSRL+KERIIC+NG ++D + +VAQLLFL
Sbjct: 37 PSLAQPPRSWTPTPFVTETVGGGWHTYDIFSRLMKERIICLNGEVDDTLSASIVAQLLFL 96
Query: 83 ESENPSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGE 142
E++NP+KPIH+Y+NSPGG VTAGLAIYDTM YI SP++TIC+GQAASMGSLLLA G G+
Sbjct: 97 EADNPAKPIHLYINSPGGSVTAGLAIYDTMTYIASPVSTICVGQAASMGSLLLAGGEAGK 156
Query: 143 RRALPNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKH-TGQ---SIEVIQK 198
R LP+S+IM+HQPSGGY GQA D+ IH K+I+RV LN +Y +H TG+ S++ I+K
Sbjct: 157 RYCLPHSSIMVHQPSGGYFGQASDIAIHAKEILRVRTQLNEIYQRHLTGKKQLSLDEIEK 216
Query: 199 NMDRDYFMTPEEAKEFGIIDEVIDQRPMALVTDAVGREGKEGKEGK 244
M+RDYFM +EA E G+IDE++++R G+EG G+E K
Sbjct: 217 LMERDYFMGAKEALELGVIDEILERR-------VQGKEGA-GEESK 254
>gi|398893207|ref|ZP_10646001.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
sp. GM55]
gi|398184565|gb|EJM72011.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
sp. GM55]
Length = 211
Score = 256 bits (653), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 111/193 (57%), Positives = 155/193 (80%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
L+PMV+E S+RGERAYDI+SRLLKER+I + GP+ D A+++ AQLLFLE+ENP K IH+
Sbjct: 19 LVPMVVEQSARGERAYDIYSRLLKERVIFLVGPVEDYMANLICAQLLFLEAENPDKDIHL 78
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VTAG++IYDTMQ+I+ ++T C+GQA SMG+ LL +G G+R LPNS +MI
Sbjct: 79 YINSPGGSVTAGMSIYDTMQFIKPNVSTTCIGQACSMGAFLLTAGAPGKRYCLPNSRVMI 138
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQP GG+ GQA D+ IH K+I+ + + LN L KH+G+++E I+++ +RD FM+ + A+E
Sbjct: 139 HQPLGGFQGQASDIEIHAKEILFIRERLNTLMAKHSGRTLEEIERDTNRDNFMSADAARE 198
Query: 214 FGIIDEVIDQRPM 226
+G+IDEVI QRP+
Sbjct: 199 YGLIDEVISQRPV 211
>gi|383640602|ref|ZP_09953008.1| ATP-dependent Clp protease proteolytic subunit [Sphingomonas elodea
ATCC 31461]
Length = 218
Score = 256 bits (653), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 119/194 (61%), Positives = 150/194 (77%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+P+VIE SSRGER++DI+SRLL+ERI+ + G + D A ++ AQLLFLESENP K I
Sbjct: 16 ALVPIVIEQSSRGERSFDIYSRLLRERIVFVTGQVEDHMASLITAQLLFLESENPKKDIW 75
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
MY+NSPGG VTAG+AI+DTMQYIR + T+C+GQAASMGS LLASG G R AL N+ IM
Sbjct: 76 MYINSPGGVVTAGMAIHDTMQYIRPRVGTVCIGQAASMGSFLLASGEPGLRVALTNARIM 135
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
+HQPSGG G A D+ I K+I+R+ +NALY K+TGQ IE I+ MDRD F EEAK
Sbjct: 136 LHQPSGGAQGMASDIEIQAKEILRIRARMNALYAKYTGQPIEKIETTMDRDSFFEAEEAK 195
Query: 213 EFGIIDEVIDQRPM 226
FGI+DEV ++RP+
Sbjct: 196 AFGIVDEVYEKRPV 209
>gi|333375817|ref|ZP_08467617.1| ATP-dependent Clp protease, protease subunit [Kingella kingae ATCC
23330]
gi|332969605|gb|EGK08623.1| ATP-dependent Clp protease, protease subunit [Kingella kingae ATCC
23330]
Length = 205
Score = 256 bits (653), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 114/194 (58%), Positives = 158/194 (81%), Gaps = 2/194 (1%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+LIP VIE S RGERA+DI+SRLLKERII + GP+ND TA++VVAQ+LFLESENP K I+
Sbjct: 8 TLIPTVIEQSGRGERAFDIYSRLLKERIIFLVGPVNDQTANLVVAQMLFLESENPDKDIY 67
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
Y+NSPGG VTAG++IYDTM++I+ + T+CLGQAASMG+ LL++GTKG+R ALPNS +M
Sbjct: 68 FYINSPGGSVTAGMSIYDTMKFIKPDVQTLCLGQAASMGAFLLSAGTKGKRFALPNSRVM 127
Query: 153 IHQP--SGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEE 210
IHQP SGG GQA D+ IH ++++++ + LN + +HTG+++ ++++ DRD FM+ +E
Sbjct: 128 IHQPLISGGLGGQASDIEIHARELLKLKEKLNQMLAEHTGKTLAEVERDTDRDNFMSAQE 187
Query: 211 AKEFGIIDEVIDQR 224
A E+G+ID+VI R
Sbjct: 188 AMEYGLIDKVITSR 201
>gi|88810607|ref|ZP_01125864.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Nitrococcus
mobilis Nb-231]
gi|88792237|gb|EAR23347.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Nitrococcus
mobilis Nb-231]
Length = 214
Score = 256 bits (653), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 113/191 (59%), Positives = 152/191 (79%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
L+PMV+E ++RGERAYDI+SRLLKER+I + GP+ D A++++AQLLFLESENP K IH+
Sbjct: 16 LVPMVVEQTARGERAYDIYSRLLKERVIFLVGPVEDHQANLLIAQLLFLESENPDKDIHL 75
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG V+AGLAIYDTMQ+++ ++T+CLGQAASMG+LLL G G+R LPNS IMI
Sbjct: 76 YINSPGGVVSAGLAIYDTMQFVKPDVSTVCLGQAASMGALLLTGGAAGKRYCLPNSRIMI 135
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQP GG+ GQA D+ IH ++I+ + + LN + +HTGQ IE IQ++ +RD FM PE A+
Sbjct: 136 HQPLGGFQGQATDVEIHAREILAMRERLNQILAQHTGQDIETIQQDTERDNFMGPEAAQS 195
Query: 214 FGIIDEVIDQR 224
+GI+D V+ R
Sbjct: 196 YGIVDGVLRDR 206
>gi|158321199|ref|YP_001513706.1| ATP-dependent Clp protease proteolytic subunit [Alkaliphilus
oremlandii OhILAs]
gi|167008645|sp|A8MIS8.1|CLPP_ALKOO RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|158141398|gb|ABW19710.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Alkaliphilus
oremlandii OhILAs]
Length = 195
Score = 256 bits (653), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 114/190 (60%), Positives = 154/190 (81%)
Query: 32 FSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPI 91
+L+PMV+E ++RGER+YDI+SRLLKERII ++ +ND TA +VVAQLLFLESE+P K I
Sbjct: 1 MALVPMVVEQTNRGERSYDIYSRLLKERIIFLSDEVNDATASLVVAQLLFLESEDPDKDI 60
Query: 92 HMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTI 151
+Y+NSPGG +TAG+AIYDTM YI+ ++TIC+G AASMG+ LL +G KG+R ALPN+ I
Sbjct: 61 QLYINSPGGSITAGMAIYDTMNYIKPDVSTICIGMAASMGAFLLTAGQKGKRFALPNAEI 120
Query: 152 MIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEA 211
MIHQP GG GQA+D+ IHT++I+++ + LN + + TGQ +E +QK+ DRD+FM EEA
Sbjct: 121 MIHQPLGGTRGQAEDIRIHTERILKMRETLNKIIAERTGQPLEKVQKDTDRDFFMEAEEA 180
Query: 212 KEFGIIDEVI 221
+ +GIIDEVI
Sbjct: 181 RAYGIIDEVI 190
>gi|365093545|ref|ZP_09330610.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Acidovorax
sp. NO-1]
gi|363414425|gb|EHL21575.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Acidovorax
sp. NO-1]
Length = 194
Score = 256 bits (653), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 111/191 (58%), Positives = 154/191 (80%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
++PMVIE S RGER+YDI+SRLLKER+I + GP+ND TA++VVAQLLFLESENP K I
Sbjct: 3 MVPMVIEQSGRGERSYDIYSRLLKERVIFLVGPVNDQTANLVVAQLLFLESENPDKDISF 62
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG V+AG+AI+DTM +I+ ++T+C G AASMG+ LLA+G KG+R ALPNS +MI
Sbjct: 63 YINSPGGSVSAGMAIFDTMNFIKPDVSTLCTGMAASMGAFLLAAGAKGKRFALPNSKVMI 122
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQP GG GQA ++ IH ++I++ + LN + + TGQ +E IQ++ +RDYF++ EE+KE
Sbjct: 123 HQPLGGMQGQATEIEIHAREILKTREQLNKILAERTGQPLEKIQRDTERDYFLSAEESKE 182
Query: 214 FGIIDEVIDQR 224
+G++D+VI +R
Sbjct: 183 YGLVDQVISKR 193
>gi|452750504|ref|ZP_21950251.1| ATP-dependent Clp protease proteolytic subunit [alpha
proteobacterium JLT2015]
gi|451961698|gb|EMD84107.1| ATP-dependent Clp protease proteolytic subunit [alpha
proteobacterium JLT2015]
Length = 212
Score = 256 bits (653), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 116/193 (60%), Positives = 153/193 (79%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+P+VIE S+RGER++DI+SRLL+ERI+ + GPI D A ++ AQLL+LESENP K I+
Sbjct: 7 ALVPIVIEQSNRGERSFDIYSRLLRERIVFVTGPIEDHMATLITAQLLYLESENPKKDIY 66
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
MY+NSPGG VTAG+AI+DTMQYIR + T+C+GQAASMGS LL++G G R AL N+ IM
Sbjct: 67 MYINSPGGVVTAGMAIHDTMQYIRPRVGTVCIGQAASMGSFLLSAGEPGMRVALTNARIM 126
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQPSGG GQA D+ I K+I+R+ +N L K+TGQ IEVI+ ++RD FM+ EAK
Sbjct: 127 IHQPSGGAQGQATDIEIQAKEILRIRHRMNELMAKYTGQDIEVIENAVERDKFMSSAEAK 186
Query: 213 EFGIIDEVIDQRP 225
+FG++DEV D+RP
Sbjct: 187 DFGLVDEVFDKRP 199
>gi|417844175|ref|ZP_12490236.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
haemolyticus M21127]
gi|341947560|gb|EGT74207.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
haemolyticus M21127]
Length = 193
Score = 256 bits (653), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 115/192 (59%), Positives = 156/192 (81%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
S+IPMV+E +SRGER+YDI+SRLLKER+I ++G + D A+++VAQLLFLESE+P+K I+
Sbjct: 2 SVIPMVVEQTSRGERSYDIYSRLLKERVIFLSGEVEDRMANLIVAQLLFLESEDPTKDIN 61
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
+Y+NSPGG VTAG+AIYDTMQ+I+ I T+C+GQA SMG+ LLA GT G+R ALPN+ +M
Sbjct: 62 IYINSPGGSVTAGMAIYDTMQFIKPDIRTLCIGQACSMGAFLLAGGTIGKRAALPNARVM 121
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQP GG+ GQA D+ IH ++I+++ LN HTGQSIE I+K+ DRD FM+ EEAK
Sbjct: 122 IHQPLGGFRGQASDIQIHAQEILKIKHTLNDRLAFHTGQSIEQIEKDTDRDNFMSAEEAK 181
Query: 213 EFGIIDEVIDQR 224
+G++DEV+ +R
Sbjct: 182 AYGLVDEVLIKR 193
>gi|306820816|ref|ZP_07454440.1| ATP-dependent Clp protease proteolytic subunit [Eubacterium yurii
subsp. margaretiae ATCC 43715]
gi|402310280|ref|ZP_10829246.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Eubacterium sp. AS15]
gi|304551134|gb|EFM39101.1| ATP-dependent Clp protease proteolytic subunit [Eubacterium yurii
subsp. margaretiae ATCC 43715]
gi|400368732|gb|EJP21739.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Eubacterium sp. AS15]
Length = 195
Score = 256 bits (653), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 115/189 (60%), Positives = 152/189 (80%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+ IP VIE +SRGER+YDI+SRLLKERII + +ND TA ++VAQLLFLESE+P K IH
Sbjct: 2 AFIPYVIEQTSRGERSYDIYSRLLKERIIFLGDEVNDQTASLIVAQLLFLESEDPDKDIH 61
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
Y+NSPGG +TAG+AIYDTMQ+I+ ++TIC+G AASMG+ LL+SG KG+R ALPNS IM
Sbjct: 62 FYINSPGGSITAGMAIYDTMQHIKPDVSTICVGMAASMGAFLLSSGKKGKRYALPNSEIM 121
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQP GG GQA D+ IH ++I+R+ LN + + TG+SIE+I K+ +RD+FM+ EEAK
Sbjct: 122 IHQPLGGTKGQATDIQIHAERIIRLRKKLNEIMAEQTGKSIEIINKDTERDFFMSAEEAK 181
Query: 213 EFGIIDEVI 221
++G+ID V+
Sbjct: 182 DYGLIDSVM 190
>gi|208779709|ref|ZP_03247053.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Francisella
novicida FTG]
gi|208744164|gb|EDZ90464.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Francisella
novicida FTG]
Length = 201
Score = 256 bits (653), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 115/192 (59%), Positives = 153/192 (79%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+P VIE ++ GERA+DI+SRLLKERI+ +NG +ND +A++V+AQLLFLESE+P+K I+
Sbjct: 5 NLVPTVIEKTAGGERAFDIYSRLLKERIVFLNGEVNDHSANLVIAQLLFLESEDPNKDIY 64
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
Y+NSPGG VTAG+ +YDTMQ+I+ ++TIC+G AASMGSLLLA G KG+R +LP+S IM
Sbjct: 65 FYINSPGGMVTAGMGVYDTMQFIKPDVSTICIGLAASMGSLLLAGGAKGKRYSLPSSQIM 124
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQP GG+ GQA D+ IH K I+R+ D LN + HTGQ +E I K+ DRD FM +EAK
Sbjct: 125 IHQPLGGFRGQASDIEIHAKNILRIKDRLNKVLAHHTGQDLETIVKDTDRDNFMMADEAK 184
Query: 213 EFGIIDEVIDQR 224
+G+ID VI+ R
Sbjct: 185 AYGLIDHVIESR 196
>gi|296116539|ref|ZP_06835149.1| ATP-dependent Clp protease proteolytic subunit [Gluconacetobacter
hansenii ATCC 23769]
gi|295976751|gb|EFG83519.1| ATP-dependent Clp protease proteolytic subunit [Gluconacetobacter
hansenii ATCC 23769]
Length = 211
Score = 256 bits (653), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 115/189 (60%), Positives = 151/189 (79%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E +SRGERA+DI+SRLL+ERII + GP+ D + VV AQLL+LES NP+K I
Sbjct: 13 ALVPMVVEQTSRGERAFDIYSRLLQERIIFLTGPVYDQVSAVVSAQLLYLESVNPTKEIS 72
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
Y+NSPGG V+AGLAIYDTMQYIRSP++T+C+GQAASMGSLLLA G KG R ALPNS +M
Sbjct: 73 FYINSPGGVVSAGLAIYDTMQYIRSPVSTVCIGQAASMGSLLLAGGEKGRRFALPNSRVM 132
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
+HQPSGG GQA D+ I +I+ + LN +Y HTG+++E I++ ++RD +M+ EEA
Sbjct: 133 VHQPSGGAQGQASDIEIQATEILTIRKRLNEIYENHTGRTLEEIERKLERDSYMSAEEAC 192
Query: 213 EFGIIDEVI 221
FGI+DEV+
Sbjct: 193 AFGIVDEVV 201
>gi|160897495|ref|YP_001563077.1| ATP-dependent Clp protease proteolytic subunit [Delftia acidovorans
SPH-1]
gi|160363079|gb|ABX34692.1| Endopeptidase Clp [Delftia acidovorans SPH-1]
Length = 201
Score = 256 bits (653), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 108/194 (55%), Positives = 157/194 (80%)
Query: 31 SFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKP 90
S L+PMV+E S+RGER++DI+SRLL++R+I +NG +ND + +V AQLLFLE+ENP KP
Sbjct: 4 SMMLVPMVVEQSARGERSFDIYSRLLRDRVIFLNGEVNDAVSALVCAQLLFLEAENPDKP 63
Query: 91 IHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNST 150
IH+Y+NSPGG +T+GLA+YDTMQ+I+SP++T+C+G A SMGS LL +G G R ALPN++
Sbjct: 64 IHLYINSPGGVITSGLAMYDTMQFIKSPVHTLCMGTARSMGSFLLMAGEPGHRMALPNAS 123
Query: 151 IMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEE 210
+ +HQP GG GQA D+ IH ++++R D + LY +H G+S E +++++DRD FMT EE
Sbjct: 124 LHVHQPLGGVQGQASDIRIHAEEMLRTKDRVTRLYAQHCGRSYEEVERDLDRDRFMTAEE 183
Query: 211 AKEFGIIDEVIDQR 224
A+E+G+ID+V+D+R
Sbjct: 184 AREWGLIDKVLDRR 197
>gi|387872212|ref|YP_005803593.1| ATP-dependent Clp protease proteolytic subunit clpP [Erwinia
pyrifoliae DSM 12163]
gi|283479306|emb|CAY75222.1| ATP-dependent Clp protease proteolytic subunit clpP [Erwinia
pyrifoliae DSM 12163]
Length = 218
Score = 256 bits (653), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 108/199 (54%), Positives = 157/199 (78%)
Query: 26 QISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESE 85
+++A +L+PMV+E +SRGER+YDI+SRLLKERII + G + D A+++VAQ+LFLE+E
Sbjct: 19 ELTAPHMALVPMVVEQTSRGERSYDIYSRLLKERIIFLTGQVEDHMANLIVAQMLFLEAE 78
Query: 86 NPSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRA 145
NP K IH+Y+NSPGG +TAG++IYDTMQ+I+ ++TIC+GQA SMG+ LL +G KG+R
Sbjct: 79 NPEKDIHLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQACSMGAFLLTAGAKGKRYC 138
Query: 146 LPNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYF 205
LPNS +MIHQP GG+ GQA D+ IH ++I++ +N L KHTGQ+IE I+++ +RD F
Sbjct: 139 LPNSRVMIHQPLGGFQGQASDIDIHAREIIKTKQMMNELMAKHTGQTIETIERDTNRDRF 198
Query: 206 MTPEEAKEFGIIDEVIDQR 224
++ E+ E+G++D V+ QR
Sbjct: 199 LSASESVEYGLVDSVLSQR 217
>gi|304319808|ref|YP_003853451.1| Protease subunit of ATP-dependent Clp protease [Parvularcula
bermudensis HTCC2503]
gi|303298711|gb|ADM08310.1| Protease subunit of ATP-dependent Clp protease [Parvularcula
bermudensis HTCC2503]
Length = 210
Score = 256 bits (653), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 114/195 (58%), Positives = 156/195 (80%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMVIE +SRGER++DI+SRLLKERII ++G ++D + ++VAQLLFLE++NP K I
Sbjct: 11 TLVPMVIEQTSRGERSFDIYSRLLKERIIFLSGQVHDQVSTLIVAQLLFLEADNPKKDIA 70
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
Y+NSPGG VTAGLA+YDTM+YIR I+T+C+G AASMGSLLL +G KG R +LPNS IM
Sbjct: 71 FYINSPGGSVTAGLAMYDTMRYIRPQISTMCVGLAASMGSLLLTAGDKGMRFSLPNSRIM 130
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
+HQPS G+ GQA D+ H + I++ LN +Y +HTGQ E I++ +DRD FMTPE+A
Sbjct: 131 VHQPSAGFQGQASDIERHARDIIQTKKRLNEIYVEHTGQDYETIERTLDRDTFMTPEDAL 190
Query: 213 EFGIIDEVIDQRPMA 227
+FG+ID+V+++R +A
Sbjct: 191 DFGLIDQVLEKRAVA 205
>gi|56551844|ref|YP_162683.1| ATP-dependent Clp protease proteolytic subunit [Zymomonas mobilis
subsp. mobilis ZM4]
gi|260752594|ref|YP_003225487.1| ATP-dependent Clp protease proteolytic subunit [Zymomonas mobilis
subsp. mobilis NCIMB 11163]
gi|384411291|ref|YP_005620656.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Zymomonas
mobilis subsp. mobilis ATCC 10988]
gi|67460187|sp|Q5NNY8.1|CLPP_ZYMMO RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|56543418|gb|AAV89572.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Zymomonas
mobilis subsp. mobilis ZM4]
gi|258551957|gb|ACV74903.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Zymomonas
mobilis subsp. mobilis NCIMB 11163]
gi|335931665|gb|AEH62205.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Zymomonas
mobilis subsp. mobilis ATCC 10988]
Length = 210
Score = 256 bits (653), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 120/195 (61%), Positives = 151/195 (77%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+LIPMV+E S+RGER++DI+SRLL+ERII + G + D A V+ AQLLFLE+ENP K I
Sbjct: 11 ALIPMVVEQSNRGERSFDIYSRLLRERIIFVTGQVEDHMASVICAQLLFLEAENPKKDIF 70
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
+Y+NSPGG VTAGLAI+DTMQYIR + T+C+GQAASMGS LLA+G G R A NS IM
Sbjct: 71 LYINSPGGVVTAGLAIHDTMQYIRPKVGTLCIGQAASMGSFLLAAGEPGMRVATTNSRIM 130
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQPSGG G A D+ I ++I+R+ LNALY K+T Q IE I+K MDRD F+ +EAK
Sbjct: 131 IHQPSGGAQGMAADIEIQAREILRMRKRLNALYAKYTNQPIEEIEKAMDRDNFLEADEAK 190
Query: 213 EFGIIDEVIDQRPMA 227
FG+ID+V D+RP+A
Sbjct: 191 AFGLIDKVFDKRPVA 205
>gi|259909254|ref|YP_002649610.1| ATP-dependent Clp protease proteolytic subunit [Erwinia pyrifoliae
Ep1/96]
gi|224964876|emb|CAX56398.1| Putative ATP-dependent Clp protease proteolytic subunit [Erwinia
pyrifoliae Ep1/96]
Length = 207
Score = 256 bits (653), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 108/199 (54%), Positives = 157/199 (78%)
Query: 26 QISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESE 85
+++A +L+PMV+E +SRGER+YDI+SRLLKERII + G + D A+++VAQ+LFLE+E
Sbjct: 8 ELTAPHMALVPMVVEQTSRGERSYDIYSRLLKERIIFLTGQVEDHMANLIVAQMLFLEAE 67
Query: 86 NPSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRA 145
NP K IH+Y+NSPGG +TAG++IYDTMQ+I+ ++TIC+GQA SMG+ LL +G KG+R
Sbjct: 68 NPEKDIHLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQACSMGAFLLTAGAKGKRYC 127
Query: 146 LPNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYF 205
LPNS +MIHQP GG+ GQA D+ IH ++I++ +N L KHTGQ+IE I+++ +RD F
Sbjct: 128 LPNSRVMIHQPLGGFQGQASDIDIHAREIIKTKQMMNELMAKHTGQTIETIERDTNRDRF 187
Query: 206 MTPEEAKEFGIIDEVIDQR 224
++ E+ E+G++D V+ QR
Sbjct: 188 LSASESVEYGLVDSVLSQR 206
>gi|254468869|ref|ZP_05082275.1| ATP-dependent Clp protease, proteolytic subunit ClpP [beta
proteobacterium KB13]
gi|207087679|gb|EDZ64962.1| ATP-dependent Clp protease, proteolytic subunit ClpP [beta
proteobacterium KB13]
Length = 207
Score = 256 bits (653), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 113/190 (59%), Positives = 154/190 (81%)
Query: 35 IPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHMY 94
IPMV+E S RGER+YDI+SRLLKER++ + GP++D TA++VVAQLLFLE+ENP K I +Y
Sbjct: 18 IPMVVEQSGRGERSYDIYSRLLKERVVFLVGPVDDMTANLVVAQLLFLEAENPDKDISLY 77
Query: 95 LNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMIH 154
+NSPGG VTAG+AIYDTMQ+I+ ++T+C+GQAASMG+LLL +G K +R LPNS +MIH
Sbjct: 78 INSPGGSVTAGMAIYDTMQFIKPDVSTLCIGQAASMGALLLTAGAKDKRFCLPNSRVMIH 137
Query: 155 QPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKEF 214
QP GG+ GQA D+ IH K+I+ + D LN + HTGQ I+ I K+ DRD FM+ E+A ++
Sbjct: 138 QPLGGFQGQASDIEIHAKEILYLKDKLNRILSHHTGQDIKTISKDTDRDNFMSSEDAVKY 197
Query: 215 GIIDEVIDQR 224
G++D+VI++R
Sbjct: 198 GLVDKVINER 207
>gi|430375836|ref|ZP_19430239.1| ATP-dependent Clp protease proteolytic subunit [Moraxella macacae
0408225]
gi|429541067|gb|ELA09095.1| ATP-dependent Clp protease proteolytic subunit [Moraxella macacae
0408225]
Length = 213
Score = 256 bits (653), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 114/213 (53%), Positives = 163/213 (76%), Gaps = 3/213 (1%)
Query: 13 MATKFLQLSKPSAQISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTA 72
M +FL ++Q+ +L+PMVIE S+RGER++DI+SRLL+ER+I + + D A
Sbjct: 1 MLEQFLDSPFANSQVKN---ALVPMVIEQSARGERSFDIYSRLLRERVIFLTAEVEDHMA 57
Query: 73 HVVVAQLLFLESENPSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGS 132
+++VAQLLFLE++NP K IH+Y+NSPGG VTAG+AIYDTM +I+ ++TICLGQAASMG+
Sbjct: 58 NLIVAQLLFLEADNPEKDIHLYINSPGGVVTAGMAIYDTMNFIKPDVSTICLGQAASMGA 117
Query: 133 LLLASGTKGERRALPNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQS 192
LL++GTKG+R AL NS +MIHQP GG+ GQA D+ IH ++I+ + + LN L +HTGQ
Sbjct: 118 FLLSAGTKGKRYALKNSRVMIHQPLGGFRGQASDIEIHAREILYLKEKLNRLIAEHTGQD 177
Query: 193 IEVIQKNMDRDYFMTPEEAKEFGIIDEVIDQRP 225
E + K+ DRD F++ + AK +G++DEV+D+RP
Sbjct: 178 YEKVAKDTDRDNFLSADAAKAYGLVDEVLDKRP 210
>gi|385787570|ref|YP_005818679.1| ATP-dependent Clp protease proteolytic subunit clpP [Erwinia sp.
Ejp617]
gi|310766842|gb|ADP11792.1| ATP-dependent Clp protease proteolytic subunit clpP [Erwinia sp.
Ejp617]
Length = 215
Score = 256 bits (653), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 108/199 (54%), Positives = 157/199 (78%)
Query: 26 QISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESE 85
+++A +L+PMV+E +SRGER+YDI+SRLLKERII + G + D A+++VAQ+LFLE+E
Sbjct: 16 ELTAPHMALVPMVVEQTSRGERSYDIYSRLLKERIIFLTGQVEDHMANLIVAQMLFLEAE 75
Query: 86 NPSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRA 145
NP K IH+Y+NSPGG +TAG++IYDTMQ+I+ ++TIC+GQA SMG+ LL +G KG+R
Sbjct: 76 NPEKDIHLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQACSMGAFLLTAGAKGKRYC 135
Query: 146 LPNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYF 205
LPNS +MIHQP GG+ GQA D+ IH ++I++ +N L KHTGQ+IE I+++ +RD F
Sbjct: 136 LPNSRVMIHQPLGGFQGQASDIDIHAREIIKTKQMMNELMAKHTGQTIETIERDTNRDRF 195
Query: 206 MTPEEAKEFGIIDEVIDQR 224
++ E+ E+G++D V+ QR
Sbjct: 196 LSASESVEYGLVDSVLSQR 214
>gi|302382854|ref|YP_003818677.1| endopeptidase Clp [Brevundimonas subvibrioides ATCC 15264]
gi|302193482|gb|ADL01054.1| Endopeptidase Clp [Brevundimonas subvibrioides ATCC 15264]
Length = 213
Score = 256 bits (653), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 116/195 (59%), Positives = 149/195 (76%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E SSRGERA+DIFSRLL+ERII + GP D A ++ AQLLFLESENP K I
Sbjct: 11 NLVPMVVEQSSRGERAFDIFSRLLRERIIFLTGPFEDGMASLICAQLLFLESENPKKEIS 70
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
MY+NSPGGQVT+ LAIYDTMQYI+SP++T+ +G AAS GSL+L +G G+R ALPN+ IM
Sbjct: 71 MYINSPGGQVTSALAIYDTMQYIKSPVSTVVMGMAASAGSLILTAGAAGQRIALPNARIM 130
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
+HQPSGG+ GQA D+ +H I LN +Y HTG++ E ++K +DRD+FM E AK
Sbjct: 131 VHQPSGGFRGQASDIELHAADIRYTKRRLNEIYVHHTGRTYEEVEKTLDRDHFMDAEAAK 190
Query: 213 EFGIIDEVIDQRPMA 227
E+GI+D V D+R A
Sbjct: 191 EWGIVDHVYDKRDQA 205
>gi|242822497|ref|XP_002487898.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Talaromyces
stipitatus ATCC 10500]
gi|218712819|gb|EED12244.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Talaromyces
stipitatus ATCC 10500]
Length = 262
Score = 256 bits (653), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 126/219 (57%), Positives = 163/219 (74%), Gaps = 5/219 (2%)
Query: 11 TSMATKFLQLS-KPSAQISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPIND 69
+S + F LS + S R ++ P V E G YDIFSRLLKERIIC+NG +++
Sbjct: 29 SSRSRTFSSLSTRLSGAAPPRGWTPTPFVTETVGGGWHTYDIFSRLLKERIICLNGEVDE 88
Query: 70 DTAHVVVAQLLFLESENPSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAAS 129
T+ +VAQLLFLE+++P KPIH+Y+NSPGG VTAGLAIYDTM YI+SP+NTIC+GQAAS
Sbjct: 89 TTSASIVAQLLFLEADSPEKPIHLYINSPGGSVTAGLAIYDTMTYIQSPVNTICVGQAAS 148
Query: 130 MGSLLLASGTKGERRALPNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKH- 188
MGSLLL G G+R LP+S+IMIHQPSGGY GQA D+ IH K+I+RV LN +Y +H
Sbjct: 149 MGSLLLCGGHAGKRYCLPHSSIMIHQPSGGYFGQASDIAIHAKEILRVRTQLNKIYQRHL 208
Query: 189 TGQ---SIEVIQKNMDRDYFMTPEEAKEFGIIDEVIDQR 224
TG+ S++ I+K M+RDYFM +EA E GI+DE++D+R
Sbjct: 209 TGKKQLSLDEIEKLMERDYFMGAQEALEMGIVDEILDRR 247
>gi|153006264|ref|YP_001380589.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Anaeromyxobacter sp. Fw109-5]
gi|166201797|sp|A7HFV9.1|CLPP_ANADF RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|152029837|gb|ABS27605.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Anaeromyxobacter sp. Fw109-5]
Length = 204
Score = 255 bits (652), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 116/193 (60%), Positives = 152/193 (78%)
Query: 35 IPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHMY 94
+P V+E + RGER+YDI+SRLLK+RI+ + PI+DD A+VV+AQLLFLESE+P K I +Y
Sbjct: 6 MPYVVEQTHRGERSYDIYSRLLKDRIVFLGTPIDDDVANVVIAQLLFLESEDPDKDISLY 65
Query: 95 LNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMIH 154
+NSPGG VT+GLAIYDTMQY++ ++TICLGQAASMG+ LLA G G+R A+PN+ IMIH
Sbjct: 66 INSPGGSVTSGLAIYDTMQYVKPQVSTICLGQAASMGAFLLAGGAAGKRFAVPNARIMIH 125
Query: 155 QPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKEF 214
QP GG+ GQA D+ I ++I+R+ LN + KHT Q +E I+K+ DRDYFM EAKE+
Sbjct: 126 QPMGGFQGQATDIDIQAREILRLKAKLNDILAKHTKQPLERIEKDTDRDYFMGAGEAKEY 185
Query: 215 GIIDEVIDQRPMA 227
G+IDEVI +P A
Sbjct: 186 GLIDEVIVHKPKA 198
>gi|404496730|ref|YP_006720836.1| ATP-dependent Clp protease proteolytic subunit [Geobacter
metallireducens GS-15]
gi|418065321|ref|ZP_12702695.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Geobacter
metallireducens RCH3]
gi|90101408|sp|Q39UH2.1|CLPP_GEOMG RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|78194335|gb|ABB32102.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Geobacter
metallireducens GS-15]
gi|373562499|gb|EHP88710.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Geobacter
metallireducens RCH3]
Length = 199
Score = 255 bits (652), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 111/192 (57%), Positives = 160/192 (83%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
L+P+V+E + RGER+YDI+SRLLK+RII + GPI+D A++V+AQLLFLE+E+P K IH+
Sbjct: 2 LVPIVVEQTGRGERSYDIYSRLLKDRIIFLGGPIDDHVANLVIAQLLFLEAEDPDKDIHL 61
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VTAG+AIYDTMQYI++P++TIC+GQAASMG+LLL+ G KG+R +L +S IMI
Sbjct: 62 YINSPGGVVTAGMAIYDTMQYIKAPVSTICVGQAASMGALLLSGGEKGKRFSLTHSRIMI 121
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQP GG+ GQA D+ IH ++I+++ LN + +++GQ++E ++ + +RDYFM+ EEAK
Sbjct: 122 HQPLGGFQGQATDIHIHAQEILKMKKRLNEIIAENSGQALEKVEADTERDYFMSGEEAKS 181
Query: 214 FGIIDEVIDQRP 225
+GIID +I ++P
Sbjct: 182 YGIIDAIIARKP 193
>gi|345874540|ref|ZP_08826351.1| endopeptidase [Neisseria weaveri LMG 5135]
gi|417957883|ref|ZP_12600801.1| endopeptidase [Neisseria weaveri ATCC 51223]
gi|343967629|gb|EGV35872.1| endopeptidase [Neisseria weaveri ATCC 51223]
gi|343970451|gb|EGV38628.1| endopeptidase [Neisseria weaveri LMG 5135]
Length = 207
Score = 255 bits (652), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 114/193 (59%), Positives = 158/193 (81%), Gaps = 2/193 (1%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
L+P VIE S RGERA+DI+SRLLKERII + GP+ND TA++VVAQLLFLESENP K I +
Sbjct: 10 LVPTVIEQSGRGERAFDIYSRLLKERIIFLVGPVNDQTANLVVAQLLFLESENPDKDIFL 69
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VTAG++IYDTM++I+ ++T+CLGQAASMG+ LL++GTKG+R ALPNS IMI
Sbjct: 70 YINSPGGSVTAGMSIYDTMKFIKPDVSTLCLGQAASMGAFLLSAGTKGKRFALPNSRIMI 129
Query: 154 HQP--SGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEA 211
HQP SGG GQA D+ IH ++++++ + LN L +H+GQ + ++++ DRD +M+ +EA
Sbjct: 130 HQPLISGGLGGQASDIEIHARELIKIKEKLNRLLAEHSGQDLAKVERDTDRDNYMSADEA 189
Query: 212 KEFGIIDEVIDQR 224
+E+G+ID+V+ R
Sbjct: 190 QEYGLIDQVLVNR 202
>gi|333916237|ref|YP_004489969.1| ATP-dependent Clp protease proteolytic subunit [Delftia sp. Cs1-4]
gi|333746437|gb|AEF91614.1| ATP-dependent Clp protease proteolytic subunit [Delftia sp. Cs1-4]
Length = 201
Score = 255 bits (652), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 108/194 (55%), Positives = 157/194 (80%)
Query: 31 SFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKP 90
S L+PMV+E S+RGER++DI+SRLL++R+I +NG +ND + +V AQLLFLE+ENP KP
Sbjct: 4 SMMLVPMVVEQSARGERSFDIYSRLLRDRVIFLNGEVNDAVSALVCAQLLFLEAENPDKP 63
Query: 91 IHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNST 150
IH+Y+NSPGG +T+GLA+YDTMQ+I+SP++T+C+G A SMGS LL +G G R ALPN++
Sbjct: 64 IHLYINSPGGVITSGLAMYDTMQFIKSPVHTLCMGTARSMGSFLLMAGEPGHRMALPNAS 123
Query: 151 IMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEE 210
+ +HQP GG GQA D+ IH ++++R D + LY +H G+S E +++++DRD FMT EE
Sbjct: 124 LHVHQPLGGVQGQASDIRIHAEEMLRTKDRVTRLYAQHCGRSYEEVERDLDRDRFMTAEE 183
Query: 211 AKEFGIIDEVIDQR 224
A+E+G+ID+V+D+R
Sbjct: 184 AREWGLIDKVLDRR 197
>gi|60389653|sp|Q6LNW0.2|CLPP_PHOPR RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
Length = 199
Score = 255 bits (652), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 112/192 (58%), Positives = 153/192 (79%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E +SRGER+YDI+SRLLKER+I + G + D A++VVAQLLFLESENP K I
Sbjct: 7 ALVPMVVEQTSRGERSYDIYSRLLKERVIFLTGQVEDHMANLVVAQLLFLESENPDKDIF 66
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
+Y+NSPGG VTAG++IYDTMQ+I+ ++T+C+GQA SMG+ LLA G KG+R LPNS +M
Sbjct: 67 LYINSPGGSVTAGMSIYDTMQFIKPNVSTVCMGQACSMGAFLLAGGAKGKRYCLPNSRVM 126
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQP GG+ GQA D+ IH K+I+ + LN+L KHTGQ +EV++ + DRD FM+ ++A
Sbjct: 127 IHQPLGGFQGQASDIQIHAKEILTIKHRLNSLLAKHTGQPLEVVEGDTDRDNFMSADQAV 186
Query: 213 EFGIIDEVIDQR 224
E+G++D V+ QR
Sbjct: 187 EYGLVDSVLTQR 198
>gi|56707749|ref|YP_169645.1| ATP-dependent Clp protease proteolytic subunit [Francisella
tularensis subsp. tularensis SCHU S4]
gi|89256249|ref|YP_513611.1| ATP-dependent Clp protease proteolytic subunit [Francisella
tularensis subsp. holarctica LVS]
gi|110670220|ref|YP_666777.1| ATP-dependent Clp protease proteolytic subunit [Francisella
tularensis subsp. tularensis FSC198]
gi|115314706|ref|YP_763429.1| ATP-dependent Clp protease proteolytic subunit [Francisella
tularensis subsp. holarctica OSU18]
gi|118497648|ref|YP_898698.1| ATP-dependent Clp protease proteolytic subunit [Francisella
novicida U112]
gi|134302069|ref|YP_001122038.1| ATP-dependent Clp protease proteolytic subunit [Francisella
tularensis subsp. tularensis WY96-3418]
gi|156502310|ref|YP_001428375.1| ATP-dependent Clp protease proteolytic subunit [Francisella
tularensis subsp. holarctica FTNF002-00]
gi|187931471|ref|YP_001891455.1| ATP-dependent Clp protease proteolytic subunit [Francisella
tularensis subsp. mediasiatica FSC147]
gi|194323619|ref|ZP_03057395.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Francisella
novicida FTE]
gi|254367562|ref|ZP_04983588.1| ATP-dependent Clp protease subunit P [Francisella tularensis subsp.
holarctica 257]
gi|254369239|ref|ZP_04985251.1| hypothetical protein FTAG_00191 [Francisella tularensis subsp.
holarctica FSC022]
gi|254370252|ref|ZP_04986258.1| ATP-dependent Clp protease subunit P [Francisella tularensis subsp.
tularensis FSC033]
gi|254373013|ref|ZP_04988502.1| ATP-dependent Clp protease subunit P [Francisella tularensis subsp.
novicida GA99-3549]
gi|254374463|ref|ZP_04989944.1| hypothetical protein FTDG_00632 [Francisella novicida GA99-3548]
gi|254874562|ref|ZP_05247272.1| ATP-dependent clp protease proteolytic subunit [Francisella
tularensis subsp. tularensis MA00-2987]
gi|290953590|ref|ZP_06558211.1| ATP-dependent Clp protease proteolytic subunit [Francisella
tularensis subsp. holarctica URFT1]
gi|379716999|ref|YP_005305335.1| ATP-dependent Clp protease proteolytic subunit [Francisella
tularensis subsp. tularensis TIGB03]
gi|379725603|ref|YP_005317789.1| ATP-dependent Clp protease proteolytic subunit [Francisella
tularensis subsp. tularensis TI0902]
gi|385793031|ref|YP_005826007.1| hypothetical protein [Francisella cf. novicida Fx1]
gi|385794385|ref|YP_005830791.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Francisella
tularensis subsp. tularensis NE061598]
gi|421751883|ref|ZP_16188920.1| ATP-dependent Clp protease proteolytic subunit [Francisella
tularensis subsp. tularensis AS_713]
gi|421753738|ref|ZP_16190727.1| ATP-dependent Clp protease proteolytic subunit [Francisella
tularensis subsp. tularensis 831]
gi|421755254|ref|ZP_16192204.1| ATP-dependent Clp protease proteolytic subunit [Francisella
tularensis subsp. tularensis 80700075]
gi|421757464|ref|ZP_16194344.1| ATP-dependent Clp protease proteolytic subunit [Francisella
tularensis subsp. tularensis 80700103]
gi|421759321|ref|ZP_16196154.1| ATP-dependent Clp protease proteolytic subunit [Francisella
tularensis subsp. tularensis 70102010]
gi|422938668|ref|YP_007011815.1| ATP-dependent Clp protease proteolytic subunit [Francisella
tularensis subsp. holarctica FSC200]
gi|423050597|ref|YP_007009031.1| ATP-dependent Clp protease proteolytic subunit [Francisella
tularensis subsp. holarctica F92]
gi|424674639|ref|ZP_18111555.1| ATP-dependent Clp protease proteolytic subunit [Francisella
tularensis subsp. tularensis 70001275]
gi|67460184|sp|Q5NH47.1|CLPP_FRATT RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|116243138|sp|Q2A3U1.1|CLPP_FRATH RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|122325271|sp|Q0BM92.1|CLPP_FRATO RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|122971012|sp|Q14IJ9.1|CLPP_FRAT1 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|166201822|sp|A7NBR6.1|CLPP_FRATF RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|166201823|sp|A0Q6S9.1|CLPP_FRATN RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|166201824|sp|A4IYB6.1|CLPP_FRATW RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|226706451|sp|B2SG18.1|CLPP_FRATM RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|56604241|emb|CAG45257.1| ATP-dependent Clp protease subunit P [Francisella tularensis subsp.
tularensis SCHU S4]
gi|89144080|emb|CAJ79331.1| ATP-dependent Clp protease subunit P [Francisella tularensis subsp.
holarctica LVS]
gi|110320553|emb|CAL08640.1| ATP-dependent Clp protease subunit P [Francisella tularensis subsp.
tularensis FSC198]
gi|115129605|gb|ABI82792.1| endopeptidase Clp [Francisella tularensis subsp. holarctica OSU18]
gi|118423554|gb|ABK89944.1| ATP-dependent Clp protease subunit P [Francisella novicida U112]
gi|134049846|gb|ABO46917.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Francisella
tularensis subsp. tularensis WY96-3418]
gi|134253378|gb|EBA52472.1| ATP-dependent Clp protease subunit P [Francisella tularensis subsp.
holarctica 257]
gi|151568496|gb|EDN34150.1| ATP-dependent Clp protease subunit P [Francisella tularensis subsp.
tularensis FSC033]
gi|151570740|gb|EDN36394.1| ATP-dependent Clp protease subunit P [Francisella novicida
GA99-3549]
gi|151572182|gb|EDN37836.1| hypothetical protein FTDG_00632 [Francisella novicida GA99-3548]
gi|156252913|gb|ABU61419.1| ATP-dependent Clp protease, proteolytic subunit [Francisella
tularensis subsp. holarctica FTNF002-00]
gi|157122189|gb|EDO66329.1| hypothetical protein FTAG_00191 [Francisella tularensis subsp.
holarctica FSC022]
gi|187712380|gb|ACD30677.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Francisella
tularensis subsp. mediasiatica FSC147]
gi|194321983|gb|EDX19465.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Francisella
tularensis subsp. novicida FTE]
gi|254840561|gb|EET18997.1| ATP-dependent clp protease proteolytic subunit [Francisella
tularensis subsp. tularensis MA00-2987]
gi|282158920|gb|ADA78311.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Francisella
tularensis subsp. tularensis NE061598]
gi|332678356|gb|AEE87485.1| ATP-dependent Clp protease proteolytic subunit [Francisella cf.
novicida Fx1]
gi|377827052|gb|AFB80300.1| ATP-dependent Clp protease proteolytic subunit [Francisella
tularensis subsp. tularensis TI0902]
gi|377828676|gb|AFB78755.1| ATP-dependent Clp protease proteolytic subunit [Francisella
tularensis subsp. tularensis TIGB03]
gi|407293819|gb|AFT92725.1| ATP-dependent Clp protease proteolytic subunit [Francisella
tularensis subsp. holarctica FSC200]
gi|409086420|gb|EKM86539.1| ATP-dependent Clp protease proteolytic subunit [Francisella
tularensis subsp. tularensis 831]
gi|409086610|gb|EKM86726.1| ATP-dependent Clp protease proteolytic subunit [Francisella
tularensis subsp. tularensis AS_713]
gi|409088589|gb|EKM88653.1| ATP-dependent Clp protease proteolytic subunit [Francisella
tularensis subsp. tularensis 80700075]
gi|409091047|gb|EKM91052.1| ATP-dependent Clp protease proteolytic subunit [Francisella
tularensis subsp. tularensis 70102010]
gi|409092552|gb|EKM92523.1| ATP-dependent Clp protease proteolytic subunit [Francisella
tularensis subsp. tularensis 80700103]
gi|417434683|gb|EKT89625.1| ATP-dependent Clp protease proteolytic subunit [Francisella
tularensis subsp. tularensis 70001275]
gi|421951319|gb|AFX70568.1| ATP-dependent Clp protease proteolytic subunit [Francisella
tularensis subsp. holarctica F92]
Length = 201
Score = 255 bits (652), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 115/192 (59%), Positives = 152/192 (79%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+P VIE ++ GERA+DI+SRLLKERI+ +NG +ND +A++V+AQLLFLESE+P K I+
Sbjct: 5 NLVPTVIEKTAGGERAFDIYSRLLKERIVFLNGEVNDHSANLVIAQLLFLESEDPDKDIY 64
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
Y+NSPGG VTAG+ +YDTMQ+I+ ++TIC+G AASMGSLLLA G KG+R +LP+S IM
Sbjct: 65 FYINSPGGMVTAGMGVYDTMQFIKPDVSTICIGLAASMGSLLLAGGAKGKRYSLPSSQIM 124
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQP GG+ GQA D+ IH K I+R+ D LN + HTGQ +E I K+ DRD FM +EAK
Sbjct: 125 IHQPLGGFRGQASDIEIHAKNILRIKDRLNKVLAHHTGQDLETIVKDTDRDNFMMADEAK 184
Query: 213 EFGIIDEVIDQR 224
+G+ID VI+ R
Sbjct: 185 AYGLIDHVIESR 196
>gi|417846493|ref|ZP_12492495.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
haemolyticus M21639]
gi|341952170|gb|EGT78707.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
haemolyticus M21639]
Length = 193
Score = 255 bits (652), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 114/192 (59%), Positives = 156/192 (81%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
S+IPMV+E +SRGER+YDI+SRLLKER+I ++G + D A+++VAQLLFLESE+P+K I+
Sbjct: 2 SVIPMVVEQTSRGERSYDIYSRLLKERVIFLSGEVEDRMANLIVAQLLFLESEDPTKDIN 61
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
+Y+NSPGG VTAG+AIYDTMQ+I+ I T+C+GQA SMG+ LLA GT G+R ALPN+ +M
Sbjct: 62 IYINSPGGSVTAGMAIYDTMQFIKPDIRTLCIGQACSMGAFLLAGGTAGKRTALPNARVM 121
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQP GG+ GQA D+ IH ++I+++ LN HTGQSIE I+K+ DRD FM+ +EAK
Sbjct: 122 IHQPLGGFRGQASDIQIHAQEILKIKHTLNDRLAFHTGQSIERIEKDTDRDNFMSADEAK 181
Query: 213 EFGIIDEVIDQR 224
+G++DEV+ +R
Sbjct: 182 AYGLVDEVLIKR 193
>gi|58038575|ref|YP_190539.1| ATP-dependent Clp protease proteolytic subunit [Gluconobacter
oxydans 621H]
gi|67460438|sp|Q5FUR3.1|CLPP1_GLUOX RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|58000989|gb|AAW59883.1| ATP-dependent Clp protease proteolytic subunit [Gluconobacter
oxydans 621H]
Length = 215
Score = 255 bits (652), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 113/201 (56%), Positives = 158/201 (78%)
Query: 31 SFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKP 90
S SL+PMV+E ++RGER++DIFSRLL+ERII + GP+ D + ++ AQLL+LES NP+K
Sbjct: 13 SNSLVPMVVEQTARGERSFDIFSRLLQERIIFLTGPVYDQVSSLICAQLLYLESVNPTKE 72
Query: 91 IHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNST 150
I Y+NSPGG V+AGLAIYDTMQYIR P++T+C+GQAASMGSLLLA G KG R ALPN+
Sbjct: 73 ISFYINSPGGVVSAGLAIYDTMQYIRCPVSTVCIGQAASMGSLLLAGGEKGHRYALPNAR 132
Query: 151 IMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEE 210
+M+HQPSGG GQA D+ I ++I+ + LN +Y +HTGQ++E I++ ++RD +++ E
Sbjct: 133 VMVHQPSGGAQGQASDIEIQAREILIIRQRLNEIYREHTGQTLEQIEQKLERDSYLSANE 192
Query: 211 AKEFGIIDEVIDQRPMALVTD 231
A+EFG+ID+V+++ P D
Sbjct: 193 AREFGLIDKVVERNPHETTPD 213
>gi|195118808|ref|XP_002003928.1| GI20379 [Drosophila mojavensis]
gi|193914503|gb|EDW13370.1| GI20379 [Drosophila mojavensis]
Length = 223
Score = 255 bits (652), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 119/189 (62%), Positives = 146/189 (77%)
Query: 37 MVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHMYLN 96
MV+E + RGERAYDIFSRLLKERIIC+ G I DD + VVAQLLFL+SEN +KPIH+Y+N
Sbjct: 1 MVVEQTGRGERAYDIFSRLLKERIICLMGNITDDISSTVVAQLLFLQSENVNKPIHLYIN 60
Query: 97 SPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMIHQP 156
SPGG VTAGLAIYDTMQY++ PI T C+GQA SMGSLLLA+G G R +LPN+ IMIHQP
Sbjct: 61 SPGGVVTAGLAIYDTMQYVKPPIATWCVGQACSMGSLLLAAGAPGMRYSLPNARIMIHQP 120
Query: 157 SGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKEFGI 216
SGG GQA D+ IH ++I+++ L +Y KH S + + M+RD+FMTPEEAK GI
Sbjct: 121 SGGAQGQATDILIHAEEIIKIKRQLTNIYVKHAKNSYDEMCSRMERDHFMTPEEAKTLGI 180
Query: 217 IDEVIDQRP 225
ID V++ P
Sbjct: 181 IDHVLEHPP 189
>gi|15604378|ref|NP_220894.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia
prowazekii str. Madrid E]
gi|383487344|ref|YP_005405024.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia
prowazekii str. GvV257]
gi|383487923|ref|YP_005405602.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia
prowazekii str. Chernikova]
gi|383488769|ref|YP_005406447.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia
prowazekii str. Katsinyian]
gi|383489608|ref|YP_005407285.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia
prowazekii str. Dachau]
gi|383499749|ref|YP_005413110.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia
prowazekii str. BuV67-CWPP]
gi|383500585|ref|YP_005413945.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia
prowazekii str. RpGvF24]
gi|386082369|ref|YP_005998946.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia
prowazekii str. Rp22]
gi|6225160|sp|Q9ZD29.1|CLPP_RICPR RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|3861070|emb|CAA14970.1| ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT (clpP) [Rickettsia
prowazekii str. Madrid E]
gi|292572133|gb|ADE30048.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia
prowazekii str. Rp22]
gi|380757709|gb|AFE52946.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia
prowazekii str. GvV257]
gi|380758282|gb|AFE53518.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia
prowazekii str. RpGvF24]
gi|380760802|gb|AFE49324.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia
prowazekii str. Chernikova]
gi|380761648|gb|AFE50169.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia
prowazekii str. Katsinyian]
gi|380762495|gb|AFE51015.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia
prowazekii str. BuV67-CWPP]
gi|380763331|gb|AFE51850.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia
prowazekii str. Dachau]
Length = 201
Score = 255 bits (652), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 116/192 (60%), Positives = 151/192 (78%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
S +P+VIE +SRGERAYDI+SRLLKERII + + D A+++VAQLLFLE+ENP K I+
Sbjct: 2 SYVPVVIEQTSRGERAYDIYSRLLKERIIFVCSTVEDHMANLIVAQLLFLEAENPKKDIY 61
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
MY+NSPGG VTAGLAIYDTMQ+I+ + T+C+GQA SMGSLLL G G R +LP+S IM
Sbjct: 62 MYINSPGGVVTAGLAIYDTMQFIKPKVATLCIGQACSMGSLLLCGGEHGMRYSLPHSRIM 121
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQPSGGY GQA D+ IH ++ +++ LN LY KHT Q ++ I+K+M+RD FM+ EEAK
Sbjct: 122 IHQPSGGYKGQATDIEIHARETLKIKRLLNELYSKHTKQELKYIEKSMERDNFMSSEEAK 181
Query: 213 EFGIIDEVIDQR 224
+FG++D +I R
Sbjct: 182 KFGLVDNIISSR 193
>gi|402699101|ref|ZP_10847080.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas fragi
A22]
Length = 213
Score = 255 bits (652), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 114/193 (59%), Positives = 151/193 (78%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
L+PMV+E S+RGER+YDI+SRLLKERII + GP+ D A++V AQLLFLE+ENP K IH+
Sbjct: 19 LVPMVVEQSARGERSYDIYSRLLKERIIFLVGPVEDYMANLVAAQLLFLEAENPDKDIHL 78
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VTAG++IYDTMQ+I+ ++TIC+GQA SMG+ LLA G G+R LPNS +MI
Sbjct: 79 YINSPGGSVTAGMSIYDTMQFIKPDVSTICIGQACSMGAFLLAGGAPGKRHCLPNSRMMI 138
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQP GG+ GQA D+ IH K+I+ + LN+L HTGQS+E I+++ +RD FM+ E A E
Sbjct: 139 HQPLGGFQGQASDIDIHAKEILNIRHRLNSLLAHHTGQSLETIERDTERDNFMSAERATE 198
Query: 214 FGIIDEVIDQRPM 226
+G+ID V +R M
Sbjct: 199 YGLIDSVFSKRQM 211
>gi|451948362|ref|YP_007468957.1| ATP-dependent Clp protease proteolytic subunit ClpP [Desulfocapsa
sulfexigens DSM 10523]
gi|451907710|gb|AGF79304.1| ATP-dependent Clp protease proteolytic subunit ClpP [Desulfocapsa
sulfexigens DSM 10523]
Length = 200
Score = 255 bits (652), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 114/193 (59%), Positives = 153/193 (79%)
Query: 32 FSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPI 91
+L+PMV+E S RGER++DI+SRLL+ERI+ + + DD +VAQLLFLE+E+P K I
Sbjct: 1 MNLVPMVVEQSPRGERSFDIYSRLLRERIVFLGTSVGDDVTSSIVAQLLFLEAEDPDKDI 60
Query: 92 HMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTI 151
Y+NSPGG VTAGLAIYDTMQY++ I T+C+GQAASMG+LLLA+GT G+R ALPNS I
Sbjct: 61 TFYINSPGGSVTAGLAIYDTMQYVKCDIATLCMGQAASMGALLLAAGTAGKRYALPNSRI 120
Query: 152 MIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEA 211
MIHQP GGY GQA ++ IH ++I+R+ D LN + HTG +++ +QK+ DRD FM+P EA
Sbjct: 121 MIHQPMGGYQGQASEIDIHAQEILRMRDDLNKILAYHTGHTVKKLQKDTDRDNFMSPLEA 180
Query: 212 KEFGIIDEVIDQR 224
+++GIIDEV+ +R
Sbjct: 181 QKYGIIDEVLSKR 193
>gi|359689539|ref|ZP_09259540.1| ATP-dependent Clp protease proteolytic subunit [Leptospira
licerasiae serovar Varillal str. MMD0835]
gi|418749517|ref|ZP_13305805.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Leptospira licerasiae str. MMD4847]
gi|418759173|ref|ZP_13315353.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Leptospira licerasiae serovar Varillal str. VAR 010]
gi|384113664|gb|EID99928.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Leptospira licerasiae serovar Varillal str. VAR 010]
gi|404274402|gb|EJZ41720.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Leptospira licerasiae str. MMD4847]
Length = 197
Score = 255 bits (652), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 111/190 (58%), Positives = 155/190 (81%)
Query: 32 FSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPI 91
++IP VIE + RGE YD+FSRLLK+RII + I+DD A+V++AQLLFL++ENP + I
Sbjct: 1 MAIIPTVIEQTGRGEMRYDVFSRLLKDRIIFLGDAISDDYANVIIAQLLFLDAENPDRDI 60
Query: 92 HMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTI 151
++YLNSPGG V++GLAIYDTMQYI++ + T+C+GQA+SM +LLLA G KG+R ALP+S I
Sbjct: 61 YLYLNSPGGYVSSGLAIYDTMQYIKADVRTLCIGQASSMAALLLAGGAKGKRSALPHSRI 120
Query: 152 MIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEA 211
M+HQP+GG +GQA D+ I K+++++ LN LY KHTG+S+E +QK+ +RD +MTPEEA
Sbjct: 121 MMHQPTGGATGQASDIAIQAKEVLKLKQVLNGLYAKHTGKSVEEVQKDTERDLYMTPEEA 180
Query: 212 KEFGIIDEVI 221
+++GIID VI
Sbjct: 181 QKYGIIDSVI 190
>gi|349685703|ref|ZP_08896845.1| ATP-dependent Clp protease proteolytic subunit [Gluconacetobacter
oboediens 174Bp2]
Length = 211
Score = 255 bits (652), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 113/189 (59%), Positives = 153/189 (80%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E +SRGERA+DI+SRLL+ERII + GP+ D + +V AQLL+LES NP+K I
Sbjct: 13 ALVPMVVEQTSRGERAFDIYSRLLQERIIFLTGPVYDQVSALVSAQLLYLESVNPTKEIS 72
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
Y+NSPGG V+AGLAIYDTMQYIR P++T+C+GQAASMGSLLLA G KG R ALPNS +M
Sbjct: 73 FYINSPGGVVSAGLAIYDTMQYIRCPVSTVCIGQAASMGSLLLAGGEKGRRFALPNSRVM 132
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
+HQPSGG GQA D+ I ++I+ + LN +Y +HTG+++E I++ ++RD +M+ EEA+
Sbjct: 133 VHQPSGGAQGQASDIEIQAQEILTIRKRLNEIYKEHTGRTLEEIEQKLERDSYMSAEEAQ 192
Query: 213 EFGIIDEVI 221
FGI+DEV+
Sbjct: 193 AFGIVDEVV 201
>gi|294670412|ref|ZP_06735294.1| hypothetical protein NEIELOOT_02131 [Neisseria elongata subsp.
glycolytica ATCC 29315]
gi|291307876|gb|EFE49119.1| hypothetical protein NEIELOOT_02131 [Neisseria elongata subsp.
glycolytica ATCC 29315]
Length = 211
Score = 255 bits (652), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 117/198 (59%), Positives = 155/198 (78%), Gaps = 2/198 (1%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+LIP VIE S RGERA+DI+SRLLKERII + GP+ D TA++VVAQ+LFLESENP K I
Sbjct: 9 TLIPTVIEQSGRGERAFDIYSRLLKERIIFLVGPVTDHTANLVVAQMLFLESENPDKDIF 68
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
Y++SPGG VTAG++++DTM +I+ ++T+CLGQAASMG+ LL++G KG+R ALPNS IM
Sbjct: 69 FYIDSPGGSVTAGMSVFDTMNFIKPDVSTLCLGQAASMGAFLLSAGAKGKRFALPNSRIM 128
Query: 153 IHQP--SGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEE 210
IHQP SGG GQA D+ IH ++++++ LN L KHTGQ +E ++++ DRD FM+ E
Sbjct: 129 IHQPLISGGLGGQASDIEIHARELIKLKQKLNELLAKHTGQPLEKVERDTDRDNFMSSEA 188
Query: 211 AKEFGIIDEVIDQRPMAL 228
AKE+G+IDEVI R A
Sbjct: 189 AKEYGLIDEVIATRADAF 206
>gi|451979976|ref|ZP_21928378.1| ATP-dependent Clp protease, proteolytic subunit clpP [Nitrospina
gracilis 3/211]
gi|451762848|emb|CCQ89596.1| ATP-dependent Clp protease, proteolytic subunit clpP [Nitrospina
gracilis 3/211]
Length = 215
Score = 255 bits (652), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 113/191 (59%), Positives = 157/191 (82%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
L+P+V+E +SRGER+YDI+SRLLK+RII I I D A++++AQLLFLES+ P + I++
Sbjct: 13 LVPIVVEQTSRGERSYDIYSRLLKDRIIFIGQQIEDHMANLIIAQLLFLESDEPDQDIYL 72
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG V++GLAIYDTMQYI+ + TIC+GQAASMG+LLL +GTKG+R ALPNS +MI
Sbjct: 73 YINSPGGHVSSGLAIYDTMQYIKPDVQTICIGQAASMGALLLTAGTKGKRFALPNSRVMI 132
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQPSGG+ GQ+ D+ IH ++I++V D L+ + KH+GQ +VI+++ +RD+FMT E+AKE
Sbjct: 133 HQPSGGFQGQSTDIQIHAEEILKVRDTLDDILAKHSGQPKDVIRRDTERDHFMTGEQAKE 192
Query: 214 FGIIDEVIDQR 224
+G+ID VI R
Sbjct: 193 YGLIDNVITSR 203
>gi|444920189|ref|ZP_21240032.1| ATP-dependent Clp protease proteolytic subunit [Wohlfahrtiimonas
chitiniclastica SH04]
gi|444508508|gb|ELV08677.1| ATP-dependent Clp protease proteolytic subunit [Wohlfahrtiimonas
chitiniclastica SH04]
Length = 202
Score = 255 bits (652), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 112/194 (57%), Positives = 158/194 (81%)
Query: 31 SFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKP 90
+ +L+PMV+E S+RGERA+DI+SRLLK+R+I + GP++D +A++VVAQ+LFLE+ENP +
Sbjct: 9 NLNLVPMVVEQSARGERAFDIYSRLLKDRVIFLVGPVDDYSANLVVAQMLFLEAENPDRD 68
Query: 91 IHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNST 150
IH+Y+NSPGG VTAG++IYDTMQ+I+ ++T+C+GQA SMG+ LL +G +G+R +LPNS
Sbjct: 69 IHLYINSPGGSVTAGMSIYDTMQFIKPDVSTMCIGQACSMGAFLLTAGAEGKRLSLPNSR 128
Query: 151 IMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEE 210
IMIHQP GGY GQA D+ IHTK+++ + D LN + +HT Q ++ I K+ DRD FM+ EE
Sbjct: 129 IMIHQPLGGYQGQASDIEIHTKEMLFIKDRLNRIMAEHTKQPLKKIVKDTDRDNFMSAEE 188
Query: 211 AKEFGIIDEVIDQR 224
AK++GIID VI R
Sbjct: 189 AKKYGIIDSVISHR 202
>gi|374997740|ref|YP_004973239.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfosporosinus orientis DSM 765]
gi|357216106|gb|AET70724.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfosporosinus orientis DSM 765]
Length = 204
Score = 255 bits (652), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 115/193 (59%), Positives = 156/193 (80%), Gaps = 3/193 (1%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
L+PMV+E ++RGER+YDI+SRLLK+RII + G I+DD A++VVAQ+LFLE+E+P K I++
Sbjct: 4 LVPMVVEQTNRGERSYDIYSRLLKDRIIFLGGAIDDDVANLVVAQMLFLEAEDPEKDINL 63
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG +TAG+AIYDTMQYIRS + TIC+G AASMG+ LLASG KG+R ALPN+ ++I
Sbjct: 64 YINSPGGSITAGMAIYDTMQYIRSDVRTICIGMAASMGAFLLASGAKGKRAALPNAEVLI 123
Query: 154 HQP---SGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEE 210
HQP G SGQA ++ IH KQ++R D +N + + TGQ +E I+K+ DRDY+MT E
Sbjct: 124 HQPLIGGHGLSGQATEIEIHAKQLLRTRDKMNRILAERTGQPLEKIEKDTDRDYYMTAGE 183
Query: 211 AKEFGIIDEVIDQ 223
AKE+GIID+V ++
Sbjct: 184 AKEYGIIDQVYEK 196
>gi|118579613|ref|YP_900863.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pelobacter
propionicus DSM 2379]
gi|166201831|sp|A1AN85.1|CLPP_PELPD RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|118502323|gb|ABK98805.1| ATP-dependent Clp protease proteolytic subunit ClpP [Pelobacter
propionicus DSM 2379]
Length = 199
Score = 255 bits (652), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 114/191 (59%), Positives = 157/191 (82%)
Query: 35 IPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHMY 94
IPMV+E S RGERAYDI+SRLLKERII + G I+D A++++AQLLFLE+E+P K IH+Y
Sbjct: 3 IPMVVEQSGRGERAYDIYSRLLKERIIFLGGGIDDQVANLIIAQLLFLEAEDPDKDIHLY 62
Query: 95 LNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMIH 154
+NSPGG VT+G+AIYDTM+YI++P++TIC+GQAASMG++LLA+G KG+R +L +S IMIH
Sbjct: 63 INSPGGVVTSGMAIYDTMRYIKAPVSTICVGQAASMGAVLLAAGEKGKRFSLNHSRIMIH 122
Query: 155 QPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKEF 214
QP GG+ GQA D++IH K+I+R+ + LN++ TGQS E I+ + DRDYFM+ EA+E+
Sbjct: 123 QPLGGFQGQATDISIHAKEILRMKEELNSILADLTGQSKERIEADTDRDYFMSATEAEEY 182
Query: 215 GIIDEVIDQRP 225
G+ID ++P
Sbjct: 183 GLIDATFTRKP 193
>gi|367478010|ref|ZP_09477333.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Bradyrhizobium sp. ORS 285]
gi|365269693|emb|CCD89801.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Bradyrhizobium sp. ORS 285]
Length = 205
Score = 255 bits (652), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 108/200 (54%), Positives = 159/200 (79%)
Query: 31 SFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKP 90
+ L+PMVIE SSRGER++DI+SRLL+ERI+ +NG +ND + +V AQLLFLE+ENP +P
Sbjct: 4 TMQLVPMVIEQSSRGERSFDIYSRLLRERIVFLNGEVNDTVSALVCAQLLFLEAENPKRP 63
Query: 91 IHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNST 150
IH+Y+NSPGG +T+GLA+YDTMQ++++P++T+C+G A SMGS LL +G KGER ALPN++
Sbjct: 64 IHLYINSPGGVITSGLAMYDTMQFVKAPVHTVCMGTARSMGSFLLMAGEKGERTALPNAS 123
Query: 151 IMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEE 210
+ +HQP GG+ GQA D+ IH +++ + + LY +H G+S E +++ +DRD+FMT EE
Sbjct: 124 LHVHQPLGGFQGQASDILIHAREMEQTKRRVIRLYAEHCGRSYEDVERTLDRDHFMTAEE 183
Query: 211 AKEFGIIDEVIDQRPMALVT 230
A ++G+ID V+ QR +A V+
Sbjct: 184 ALDWGLIDRVVKQRDLASVS 203
>gi|427412668|ref|ZP_18902860.1| ATP-dependent Clp protease proteolytic subunit [Veillonella ratti
ACS-216-V-Col6b]
gi|425716475|gb|EKU79459.1| ATP-dependent Clp protease proteolytic subunit [Veillonella ratti
ACS-216-V-Col6b]
Length = 197
Score = 255 bits (652), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 113/193 (58%), Positives = 158/193 (81%), Gaps = 1/193 (0%)
Query: 35 IPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHMY 94
+P+V+E S RGER+YDI+SRLLK+RI+ + GPINDD A++V+AQLLFLE+E+P K IH+Y
Sbjct: 3 VPVVVEQSGRGERSYDIYSRLLKDRIVFLGGPINDDVANLVIAQLLFLEAEDPDKDIHLY 62
Query: 95 LNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMIH 154
+NSPGG VTAG+AIYDTMQYI+ ++TIC+G AASMG++LL +G KG+R ALP++ +MIH
Sbjct: 63 INSPGGVVTAGMAIYDTMQYIKPDVSTICVGSAASMGAVLLTAGAKGKRYALPHARVMIH 122
Query: 155 QPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKEF 214
QP GG GQA ++ IH ++I+R+ + LN L H+GQ I+VI ++ DRD FM+ E+A ++
Sbjct: 123 QPLGGVQGQASEIEIHAREILRMREELNGLLASHSGQPIDVIARDTDRDNFMSAEDAVKY 182
Query: 215 GIIDEVIDQRPMA 227
G+IDEV+ RP+A
Sbjct: 183 GLIDEVL-TRPVA 194
>gi|78066693|ref|YP_369462.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia sp.
383]
gi|167586932|ref|ZP_02379320.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
ubonensis Bu]
gi|90101404|sp|Q39FE8.1|CLPP_BURS3 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|77967438|gb|ABB08818.1| ATP-dependent Clp protease proteolytic subunit ClpP [Burkholderia
sp. 383]
Length = 217
Score = 255 bits (652), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 114/197 (57%), Positives = 157/197 (79%)
Query: 29 ARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPS 88
A++ L+P+V+E S RGER+YDI+SRLLKER++ + G +ND TA++VVAQLLFLESENP
Sbjct: 21 AQALGLVPIVVETSGRGERSYDIYSRLLKERLVFMVGEVNDQTANLVVAQLLFLESENPD 80
Query: 89 KPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPN 148
K I +Y+NSPGG V+AG+AIYDTMQ+I+ ++T+C+G AASMG+ LLASG KG+R ALPN
Sbjct: 81 KDISLYINSPGGSVSAGMAIYDTMQFIKPDVSTLCMGLAASMGAFLLASGAKGKRFALPN 140
Query: 149 STIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTP 208
S +MIHQP GG GQA D+ I ++I+ + + LN L +HTGQ +E I ++ DRD FM+
Sbjct: 141 SRVMIHQPLGGARGQASDIEIQAREILYLKERLNQLLAQHTGQDVERIARDTDRDNFMSS 200
Query: 209 EEAKEFGIIDEVIDQRP 225
E+AK +G+ID+V+ +RP
Sbjct: 201 EDAKAYGLIDQVLLKRP 217
>gi|399002988|ref|ZP_10705662.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
sp. GM18]
gi|398123674|gb|EJM13215.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
sp. GM18]
Length = 211
Score = 255 bits (652), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 111/193 (57%), Positives = 154/193 (79%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
L+PMV+E S+RGERAYDI+SRLLKER+I + GP+ D A+++ AQLLFLE+ENP K IH+
Sbjct: 19 LVPMVVEQSARGERAYDIYSRLLKERVIFLVGPVEDYMANLICAQLLFLEAENPDKDIHL 78
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VTAG++IYDTMQ+I+ ++T C+GQA SMG+ LL +G G+R LPNS +MI
Sbjct: 79 YINSPGGSVTAGMSIYDTMQFIKPNVSTTCIGQACSMGAFLLTAGAPGKRYCLPNSRVMI 138
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQP GG+ GQA D+ IH K+I+ + + LN L H+G+++E I+++ +RD FM+ E A+E
Sbjct: 139 HQPLGGFQGQASDIEIHAKEILFIRERLNTLMAAHSGRTLEEIERDTNRDNFMSAEAARE 198
Query: 214 FGIIDEVIDQRPM 226
+G+IDEVI QRP+
Sbjct: 199 YGLIDEVISQRPV 211
>gi|329894939|ref|ZP_08270738.1| ATP-dependent Clp protease proteolytic subunit [gamma
proteobacterium IMCC3088]
gi|328922668|gb|EGG30003.1| ATP-dependent Clp protease proteolytic subunit [gamma
proteobacterium IMCC3088]
Length = 200
Score = 255 bits (652), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 113/197 (57%), Positives = 154/197 (78%)
Query: 28 SARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENP 87
+ + LIPMV+E +SRGER+YDI+SRLLKER+I + G + D A+++VAQLLFLESENP
Sbjct: 3 TVENLGLIPMVVEQTSRGERSYDIYSRLLKERVIFVVGQVEDHMANLIVAQLLFLESENP 62
Query: 88 SKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALP 147
K IH+Y+NSPGG VTAGLAIYDTM++I+ + T C+GQAASMG+ LL++G KG+R LP
Sbjct: 63 DKDIHLYINSPGGSVTAGLAIYDTMKFIKPDVTTTCMGQAASMGAFLLSAGAKGKRYCLP 122
Query: 148 NSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMT 207
N+ MIHQPSGG GQA D+ I K+I+ + + LN L +HTGQ I+VI+++ +RD FM
Sbjct: 123 NARTMIHQPSGGAQGQATDIDIQAKEILIIRERLNRLMAEHTGQPIDVIERDTERDRFMN 182
Query: 208 PEEAKEFGIIDEVIDQR 224
E++KE+G++DEV+ R
Sbjct: 183 AEQSKEYGLVDEVVSSR 199
>gi|145628436|ref|ZP_01784237.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
influenzae 22.1-21]
gi|145633845|ref|ZP_01789567.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
influenzae 3655]
gi|145637965|ref|ZP_01793604.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
influenzae PittHH]
gi|145639474|ref|ZP_01795079.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
influenzae PittII]
gi|148826642|ref|YP_001291395.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
influenzae PittEE]
gi|148827882|ref|YP_001292635.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
influenzae PittGG]
gi|229845547|ref|ZP_04465675.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
influenzae 6P18H1]
gi|229847178|ref|ZP_04467282.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
influenzae 7P49H1]
gi|260583375|ref|ZP_05851146.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Haemophilus
influenzae NT127]
gi|319775445|ref|YP_004137933.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
influenzae F3047]
gi|386266553|ref|YP_005830045.1| ATP-dependent Clp protease proteolytic subunit ClpP [Haemophilus
influenzae R2846]
gi|166201826|sp|A5UE11.1|CLPP_HAEIE RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|166201827|sp|A5UHJ6.1|CLPP_HAEIG RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|144980211|gb|EDJ89870.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
influenzae 22.1-21]
gi|144985287|gb|EDJ92126.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
influenzae 3655]
gi|145268831|gb|EDK08795.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
influenzae PittHH]
gi|145271521|gb|EDK11433.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
influenzae PittII]
gi|148716802|gb|ABQ99012.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
influenzae PittEE]
gi|148719124|gb|ABR00252.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
influenzae PittGG]
gi|229809854|gb|EEP45576.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
influenzae 7P49H1]
gi|229811563|gb|EEP47264.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
influenzae 6P18H1]
gi|260093580|gb|EEW77497.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Haemophilus
influenzae NT127]
gi|309751687|gb|ADO81671.1| ATP-dependent Clp protease proteolytic subunit ClpP [Haemophilus
influenzae R2866]
gi|309973789|gb|ADO96990.1| ATP-dependent Clp protease proteolytic subunit ClpP [Haemophilus
influenzae R2846]
gi|317450036|emb|CBY86250.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
influenzae F3047]
Length = 193
Score = 255 bits (652), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 114/192 (59%), Positives = 156/192 (81%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
S+IPMV+E +SRGER+YDI+SRLLKER+I ++G + D A+++VAQLLFLESE+P+K I+
Sbjct: 2 SVIPMVVEQTSRGERSYDIYSRLLKERVIFLSGEVEDRMANLIVAQLLFLESEDPTKDIN 61
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
+Y+NSPGG VTAG+AIYDTMQ+I+ I T+C+GQA SMG+ LLA GT G+R ALPN+ +M
Sbjct: 62 IYINSPGGSVTAGMAIYDTMQFIKPDIRTLCIGQACSMGAFLLAGGTAGKRAALPNARVM 121
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQP GG+ GQA D+ IH ++I+++ LN HTGQSIE I+K+ DRD FM+ EEA+
Sbjct: 122 IHQPLGGFRGQASDIQIHAQEILKIKHTLNDRLAFHTGQSIERIEKDTDRDNFMSAEEAQ 181
Query: 213 EFGIIDEVIDQR 224
+G++DEV+ +R
Sbjct: 182 AYGLVDEVLVKR 193
>gi|345564755|gb|EGX47715.1| hypothetical protein AOL_s00083g223 [Arthrobotrys oligospora ATCC
24927]
Length = 260
Score = 255 bits (652), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 121/214 (56%), Positives = 163/214 (76%), Gaps = 3/214 (1%)
Query: 15 TKFLQLSKP-SAQISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAH 73
+ Q +P S++ + R + P V E ++ G YDIFSRLLKERII +NGP++D +
Sbjct: 37 SSLFQTVRPFSSRPAIRDWVPTPYVHETTAGGWHTYDIFSRLLKERIITLNGPVHDGLSA 96
Query: 74 VVVAQLLFLESENPSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSL 133
VVAQLLFLE++NP KPIH+Y+NSPGG VTAGLAIYDTM YI+ P++TIC+GQAASMGSL
Sbjct: 97 TVVAQLLFLEADNPDKPIHLYINSPGGSVTAGLAIYDTMNYIQCPVSTICIGQAASMGSL 156
Query: 134 LLASGTKGERRALPNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQ-- 191
LL G KG R ALP+S++M+HQPSGGYSGQA D+ IH K+I+RV ++LN +Y KH +
Sbjct: 157 LLVGGEKGRRFALPHSSVMLHQPSGGYSGQASDIAIHAKEILRVRESLNKIYQKHLTKPH 216
Query: 192 SIEVIQKNMDRDYFMTPEEAKEFGIIDEVIDQRP 225
+++ I+K M+RD FM+ E+A G+IDE++ +RP
Sbjct: 217 TLDEIEKIMERDLFMSAEDALNMGLIDEILTKRP 250
>gi|381400295|ref|ZP_09925271.1| ATP-dependent Clp protease proteolytic subunit [Kingella kingae
PYKK081]
gi|380834682|gb|EIC14511.1| ATP-dependent Clp protease proteolytic subunit [Kingella kingae
PYKK081]
Length = 205
Score = 255 bits (652), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 114/194 (58%), Positives = 158/194 (81%), Gaps = 2/194 (1%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+LIP VIE S RGERA+DI+SRLLKERII + GP+ND TA++VVAQ+LFLESENP K I+
Sbjct: 8 TLIPTVIEQSGRGERAFDIYSRLLKERIIFLVGPVNDQTANLVVAQMLFLESENPDKDIY 67
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
Y+NSPGG VTAG++IYDTM++I+ + T+CLGQAASMG+ LL++GTKG+R ALPNS +M
Sbjct: 68 FYINSPGGSVTAGMSIYDTMKFIKPDVQTLCLGQAASMGAFLLSAGTKGKRFALPNSRVM 127
Query: 153 IHQP--SGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEE 210
IHQP SGG GQA D+ IH ++++++ + LN + +HTG+++ ++++ DRD FM+ +E
Sbjct: 128 IHQPLISGGLGGQASDIEIHARELLKLKEKLNQMLAEHTGKTLAEVERDTDRDNFMSAQE 187
Query: 211 AKEFGIIDEVIDQR 224
A E+G+ID+VI R
Sbjct: 188 AIEYGLIDKVITSR 201
>gi|383454037|ref|YP_005368026.1| ATP-dependent Clp protease proteolytic subunit [Corallococcus
coralloides DSM 2259]
gi|380732364|gb|AFE08366.1| ATP-dependent Clp protease proteolytic subunit [Corallococcus
coralloides DSM 2259]
Length = 206
Score = 255 bits (652), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 116/193 (60%), Positives = 153/193 (79%)
Query: 32 FSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPI 91
F +P VIE + RGER+YDI+SRLLK+RI+ + I+DD A+ +VAQLLFLESE+P K I
Sbjct: 3 FMPVPYVIEQTHRGERSYDIYSRLLKDRIVMLGTEIDDDVANAIVAQLLFLESEDPDKDI 62
Query: 92 HMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTI 151
++Y+NSPGG VTAGLAIYDTMQY+++P++TIC+GQAASMG++LL +G KG+R +LP+S I
Sbjct: 63 NLYINSPGGSVTAGLAIYDTMQYVKAPVSTICVGQAASMGAVLLLAGAKGKRYSLPSSRI 122
Query: 152 MIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEA 211
MIHQP GG GQA D+ I ++I+R+ LN L KHTGQ+IE ++K+ DRDYFM EA
Sbjct: 123 MIHQPLGGARGQATDIEIQAREILRMKAKLNELIVKHTGQTIERVEKDTDRDYFMGAAEA 182
Query: 212 KEFGIIDEVIDQR 224
K +GIID + D R
Sbjct: 183 KAYGIIDSIQDPR 195
>gi|325577258|ref|ZP_08147742.1| ATP-dependent Clp protease, protease subunit [Haemophilus
parainfluenzae ATCC 33392]
gi|419802180|ref|ZP_14327381.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Haemophilus parainfluenzae HK262]
gi|325160840|gb|EGC72961.1| ATP-dependent Clp protease, protease subunit [Haemophilus
parainfluenzae ATCC 33392]
gi|385191502|gb|EIF38916.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Haemophilus parainfluenzae HK262]
Length = 193
Score = 255 bits (652), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 113/192 (58%), Positives = 155/192 (80%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
S+IPMV+E +SRGER+YDI+SRLLKER+I ++G + D A+++VAQLLFLESE+P K I+
Sbjct: 2 SVIPMVVEQTSRGERSYDIYSRLLKERVIFLSGEVEDRMANLIVAQLLFLESEDPKKDIN 61
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
+Y+NSPGG VTAG+AIYDTMQ+I+ + T+C+GQA SMG+ LLA GT G+R ALPN+ +M
Sbjct: 62 IYINSPGGSVTAGMAIYDTMQFIKPDVRTLCIGQACSMGAFLLAGGTAGKRAALPNARVM 121
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQP GG+ GQA D+ IH ++I+++ LN HTGQSIE I+K+ DRD FM+ EEAK
Sbjct: 122 IHQPLGGFRGQASDIQIHAQEILKIKQTLNERLAFHTGQSIERIEKDTDRDNFMSAEEAK 181
Query: 213 EFGIIDEVIDQR 224
+G++D+V+ +R
Sbjct: 182 AYGLVDDVLIKR 193
>gi|338739742|ref|YP_004676704.1| ATP-dependent Clp protease, proteolytic subunit [Hyphomicrobium sp.
MC1]
gi|337760305|emb|CCB66136.1| ATP-dependent Clp protease, proteolytic subunit [Hyphomicrobium sp.
MC1]
Length = 217
Score = 255 bits (652), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 113/198 (57%), Positives = 153/198 (77%)
Query: 27 ISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESEN 86
I+ + + PMV+E ++RGER YD+ SRLLKERII + GP+ D A + QLLFLESEN
Sbjct: 5 INTLTNTFWPMVVEQTTRGERGYDLPSRLLKERIIFVTGPVEDHMAASICMQLLFLESEN 64
Query: 87 PSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRAL 146
P K I MY+NSPGG VTAG+AIYDTMQ+++ + T+C+GQAASMGSLLL +G KG R AL
Sbjct: 65 PKKEISMYINSPGGVVTAGMAIYDTMQFVKPAVATLCIGQAASMGSLLLCAGAKGMRYAL 124
Query: 147 PNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFM 206
PN+ +M+HQPSGG+SGQA D+ H + I+++ LN Y KHTGQ+ E++ K +DRDYFM
Sbjct: 125 PNARVMVHQPSGGFSGQASDIERHAEDIIKMKRRLNETYVKHTGQTYEMVDKTLDRDYFM 184
Query: 207 TPEEAKEFGIIDEVIDQR 224
T ++A++FG+ID+V++ R
Sbjct: 185 TADQARDFGLIDKVLENR 202
>gi|255102472|ref|ZP_05331449.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile QCD-63q42]
Length = 194
Score = 255 bits (652), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 113/193 (58%), Positives = 155/193 (80%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+P+V+E + RGER+YDIFSRLLK+RII + +ND TA ++VAQLLFLE+E+P K IH
Sbjct: 2 ALVPVVVEQTGRGERSYDIFSRLLKDRIIFLGDQVNDATAGLIVAQLLFLEAEDPDKDIH 61
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
+Y+NSPGG +T+G+AIYDTMQYI+ ++TIC+G AASMG+ LLA+G KG+R ALPNS IM
Sbjct: 62 LYINSPGGSITSGMAIYDTMQYIKPDVSTICIGMAASMGAFLLAAGAKGKRLALPNSEIM 121
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQP GG GQA D+ IH K+I+++ + LN ++ + TGQ +E I+ + +RD FM+ EAK
Sbjct: 122 IHQPLGGAQGQATDIEIHAKRILKIKETLNEIFSERTGQPLEKIKMDTERDNFMSALEAK 181
Query: 213 EFGIIDEVIDQRP 225
E+G+IDEV +RP
Sbjct: 182 EYGLIDEVFTKRP 194
>gi|288818082|ref|YP_003432430.1| ATP-dependent Clp protease proteolytic subunit [Hydrogenobacter
thermophilus TK-6]
gi|384128847|ref|YP_005511460.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Hydrogenobacter thermophilus TK-6]
gi|288787482|dbj|BAI69229.1| ATP-dependent Clp protease proteolytic subunit [Hydrogenobacter
thermophilus TK-6]
gi|308751684|gb|ADO45167.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Hydrogenobacter thermophilus TK-6]
Length = 199
Score = 255 bits (651), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 114/191 (59%), Positives = 157/191 (82%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
L+P+VIE + RGERAYDI+SRLL++RI+ + PI+D A+++VAQLLFLE+++P K I+M
Sbjct: 8 LVPIVIEQTPRGERAYDIYSRLLQDRIVLLGYPIDDHVANLIVAQLLFLEAQDPEKDIYM 67
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VTAG+AIYDTMQYI+ + TIC+GQAASMG++LLA+G G+R ALP+S IMI
Sbjct: 68 YINSPGGSVTAGMAIYDTMQYIKPDVVTICIGQAASMGAVLLAAGAPGKRYALPHSRIMI 127
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQP GG +GQA D+ IH ++I R+ LN + KHTGQ +E I+++++RDYFM+ EEA+E
Sbjct: 128 HQPLGGITGQATDIIIHAEEIKRIKHMLNEILSKHTGQPLERIERDVERDYFMSSEEARE 187
Query: 214 FGIIDEVIDQR 224
+GI+D VI +R
Sbjct: 188 YGIVDRVIAKR 198
>gi|260913095|ref|ZP_05919577.1| ATP-dependent Clp protease [Pasteurella dagmatis ATCC 43325]
gi|260632682|gb|EEX50851.1| ATP-dependent Clp protease [Pasteurella dagmatis ATCC 43325]
Length = 193
Score = 255 bits (651), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 114/192 (59%), Positives = 155/192 (80%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
S+IPMV+E +SRGER+YDI+SRLLKER+I ++G + D A+++VAQLLFLESE+P K I+
Sbjct: 2 SVIPMVVEQTSRGERSYDIYSRLLKERVIFLSGEVEDRMANLIVAQLLFLESEDPEKDIN 61
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
+Y+NSPGG VTAG+AIYDTMQ+I+ I T+C+GQA SMG+ LLA GT G+R ALPN+ +M
Sbjct: 62 IYINSPGGSVTAGMAIYDTMQFIKPDIRTLCVGQACSMGAFLLAGGTAGKRIALPNARVM 121
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQP GG+ GQA D+ IH ++I+++ LN HTGQSIE I+++ DRD FM+ EEAK
Sbjct: 122 IHQPLGGFRGQASDIQIHAQEILKIKQTLNERLAFHTGQSIERIERDTDRDNFMSAEEAK 181
Query: 213 EFGIIDEVIDQR 224
+G++DEV+ +R
Sbjct: 182 AYGLVDEVLVKR 193
>gi|94498801|ref|ZP_01305347.1| ATP-dependent Clp protease [Sphingomonas sp. SKA58]
gi|94421730|gb|EAT06785.1| ATP-dependent Clp protease [Sphingomonas sp. SKA58]
Length = 211
Score = 255 bits (651), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 114/193 (59%), Positives = 153/193 (79%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+P+VIE S+RGER++DIFSRLL+ERII + G + D A ++VAQLLFLESENP K I
Sbjct: 11 ALVPIVIEQSNRGERSFDIFSRLLRERIIFVTGQVEDHMASLIVAQLLFLESENPKKDIW 70
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
MY+NSPGG VT+G+AI+DTM+YIR + T+C+GQAASMGS LLA+G G+R AL N+ IM
Sbjct: 71 MYINSPGGVVTSGMAIHDTMKYIRPQVGTVCIGQAASMGSFLLAAGEPGKRIALSNARIM 130
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
+HQPSGG G A D+ I K+I+R+ LN LY ++TGQ++E +++ MDRD F+ +EAK
Sbjct: 131 VHQPSGGAQGMASDIEIQAKEILRIRRRLNDLYVQYTGQTLEAVERAMDRDTFLEADEAK 190
Query: 213 EFGIIDEVIDQRP 225
FG++DEV D+RP
Sbjct: 191 AFGLVDEVFDRRP 203
>gi|393218999|gb|EJD04487.1| hypothetical protein FOMMEDRAFT_140424 [Fomitiporia mediterranea
MF3/22]
Length = 202
Score = 255 bits (651), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 114/198 (57%), Positives = 158/198 (79%), Gaps = 7/198 (3%)
Query: 37 MVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHMYLN 96
MVIE S RGER++DIFSRLL+ER++ ++GPI D + V VAQLLFLE+E+ +KPIHMY+N
Sbjct: 1 MVIEQSGRGERSFDIFSRLLRERVVMLHGPIRDSMSAVAVAQLLFLEAEDATKPIHMYIN 60
Query: 97 SPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMIHQP 156
SPGG VTAGLAIYDT+QY+ SPI+T C+GQA SMGSLLLA+G KG+R +LP+++IMIHQP
Sbjct: 61 SPGGSVTAGLAIYDTVQYVSSPIHTYCVGQACSMGSLLLAAGEKGKRHSLPHASIMIHQP 120
Query: 157 SGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVI-------QKNMDRDYFMTPE 209
SGG SGQA D+ IH ++I+RV + L +Y +H + E + +K ++RDYFMT +
Sbjct: 121 SGGASGQASDIAIHAREILRVREVLTQIYQRHCAKEGEDVKDGLSRFEKALERDYFMTAK 180
Query: 210 EAKEFGIIDEVIDQRPMA 227
EA +FG++D ++++RP++
Sbjct: 181 EALDFGLVDSILERRPVS 198
>gi|78485521|ref|YP_391446.1| ATP-dependent Clp protease proteolytic subunit [Thiomicrospira
crunogena XCL-2]
gi|110816468|sp|Q31GF1.1|CLPP_THICR RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|78363807|gb|ABB41772.1| ATP-dependent Clp protease proteolytic subunit ClpP [Thiomicrospira
crunogena XCL-2]
Length = 200
Score = 255 bits (651), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 112/192 (58%), Positives = 156/192 (81%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMVIE +SRGER++DI+SRLLKER+I + G + D A+++VAQLLFLESENP K IH
Sbjct: 9 ALVPMVIEQTSRGERSFDIYSRLLKERVIFLVGQVEDHMANLIVAQLLFLESENPDKDIH 68
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
+Y+NSPGG VTAG+AIYDTM++I+ ++T+C+GQAASMGS LL++G +G+R ALPNS +M
Sbjct: 69 LYINSPGGSVTAGMAIYDTMRFIKPDVSTMCIGQAASMGSFLLSAGAEGKRYALPNSRVM 128
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQP GG+ GQA D+ IH K+I+++ LN HTGQ IEVI+ + DRD FM+ +EA
Sbjct: 129 IHQPLGGFQGQASDIEIHAKEIIQIKQKLNKALADHTGQPIEVIENDTDRDNFMSADEAC 188
Query: 213 EFGIIDEVIDQR 224
++G++D+V+ +R
Sbjct: 189 DYGLVDKVLTRR 200
>gi|107028898|ref|YP_625993.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
cenocepacia AU 1054]
gi|115351962|ref|YP_773801.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
ambifaria AMMD]
gi|116689944|ref|YP_835567.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
cenocepacia HI2424]
gi|170702050|ref|ZP_02892966.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
ambifaria IOP40-10]
gi|170733282|ref|YP_001765229.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
cenocepacia MC0-3]
gi|171320790|ref|ZP_02909797.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
ambifaria MEX-5]
gi|172060888|ref|YP_001808540.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
ambifaria MC40-6]
gi|206560359|ref|YP_002231123.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
cenocepacia J2315]
gi|402566278|ref|YP_006615623.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
cepacia GG4]
gi|421866865|ref|ZP_16298527.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
cenocepacia H111]
gi|116243129|sp|Q1BH85.1|CLPP_BURCA RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|122322952|sp|Q0BEF6.1|CLPP_BURCM RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|166201802|sp|A0K847.1|CLPP_BURCH RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|105898062|gb|ABF81020.1| ATP-dependent Clp protease proteolytic subunit ClpP [Burkholderia
cenocepacia AU 1054]
gi|115281950|gb|ABI87467.1| ATP-dependent Clp protease proteolytic subunit ClpP [Burkholderia
ambifaria AMMD]
gi|116648033|gb|ABK08674.1| ATP-dependent Clp protease proteolytic subunit ClpP [Burkholderia
cenocepacia HI2424]
gi|169816524|gb|ACA91107.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
cenocepacia MC0-3]
gi|170133036|gb|EDT01448.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
ambifaria IOP40-10]
gi|171093960|gb|EDT39074.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
ambifaria MEX-5]
gi|171993405|gb|ACB64324.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
ambifaria MC40-6]
gi|198036400|emb|CAR52296.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
cenocepacia J2315]
gi|358073029|emb|CCE49405.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
cenocepacia H111]
gi|402247475|gb|AFQ47929.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
cepacia GG4]
Length = 217
Score = 255 bits (651), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 114/197 (57%), Positives = 157/197 (79%)
Query: 29 ARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPS 88
A++ L+P+V+E S RGER+YDI+SRLLKER++ + G +ND TA++VVAQLLFLESENP
Sbjct: 21 AQALGLVPIVVETSGRGERSYDIYSRLLKERLVFMVGEVNDQTANLVVAQLLFLESENPD 80
Query: 89 KPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPN 148
K I +Y+NSPGG V+AG+AIYDTMQ+I+ ++T+C+G AASMG+ LLASG KG+R ALPN
Sbjct: 81 KDISLYINSPGGSVSAGMAIYDTMQFIKPDVSTLCMGLAASMGAFLLASGAKGKRFALPN 140
Query: 149 STIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTP 208
S +MIHQP GG GQA D+ I ++I+ + + LN L +HTGQ +E I ++ DRD FM+
Sbjct: 141 SRVMIHQPLGGARGQASDIEIQAREILYLKERLNNLLAQHTGQDVERIARDTDRDNFMSS 200
Query: 209 EEAKEFGIIDEVIDQRP 225
E+AK +G+ID+V+ +RP
Sbjct: 201 EDAKAYGLIDQVLLKRP 217
>gi|398871356|ref|ZP_10626671.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
sp. GM74]
gi|398206297|gb|EJM93064.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
sp. GM74]
Length = 211
Score = 255 bits (651), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 111/192 (57%), Positives = 153/192 (79%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
L+PMV+E S+RGERAYDI+SRLLKER+I + GP+ D A+++ AQLLFLE+ENP K IH+
Sbjct: 19 LVPMVVEQSARGERAYDIYSRLLKERVIFLVGPVEDYMANLICAQLLFLEAENPDKDIHL 78
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VTAG++IYDTMQ+I+ + T C+GQA SMG+ LL +G G+R LPNS +MI
Sbjct: 79 YINSPGGSVTAGMSIYDTMQFIKPNVATTCIGQACSMGAFLLTAGAPGKRYCLPNSRVMI 138
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQP GG+ GQA D+ IH K+I+ + + LN L +H+G+++E I+++ +RD FM+ E A+E
Sbjct: 139 HQPLGGFQGQASDIEIHAKEILFIRERLNTLMAQHSGRTLEEIERDTNRDNFMSAEAARE 198
Query: 214 FGIIDEVIDQRP 225
+G+IDEVI QRP
Sbjct: 199 YGLIDEVISQRP 210
>gi|198283159|ref|YP_002219480.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Acidithiobacillus ferrooxidans ATCC 53993]
gi|218667656|ref|YP_002425388.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Acidithiobacillus ferrooxidans ATCC 23270]
gi|198247680|gb|ACH83273.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Acidithiobacillus ferrooxidans ATCC 53993]
gi|218519869|gb|ACK80455.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Acidithiobacillus ferrooxidans ATCC 23270]
Length = 214
Score = 255 bits (651), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 111/197 (56%), Positives = 157/197 (79%)
Query: 28 SARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENP 87
+ + +PMV+E + RGER+YDI+SRLLKER++ + G + D A++VVAQLLFLE+ENP
Sbjct: 12 AVQGLGYVPMVVEQTGRGERSYDIYSRLLKERVVFLVGQVEDMMANLVVAQLLFLEAENP 71
Query: 88 SKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALP 147
K I +Y+NSPGG VTAG+AIYDTMQ++R I+T+C+GQAASMG++LLA+G +G+R ALP
Sbjct: 72 DKDIALYINSPGGSVTAGMAIYDTMQFVRPKISTVCIGQAASMGAVLLAAGAEGKRYALP 131
Query: 148 NSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMT 207
N+ IM+HQPSGG+ GQA D+ IHTK+I+R+ + LN + HTGQ E I++++DRD+FM+
Sbjct: 132 NARIMLHQPSGGFQGQAHDIEIHTKEILRIRERLNDILVHHTGQGRERIEQDLDRDFFMS 191
Query: 208 PEEAKEFGIIDEVIDQR 224
EEA+ + ++D VI R
Sbjct: 192 AEEAQTYHLVDAVISHR 208
>gi|329122525|ref|ZP_08251109.1| ATP-dependent Clp protease, protease subunit [Haemophilus aegyptius
ATCC 11116]
gi|327473154|gb|EGF18577.1| ATP-dependent Clp protease, protease subunit [Haemophilus aegyptius
ATCC 11116]
Length = 211
Score = 255 bits (651), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 114/196 (58%), Positives = 157/196 (80%)
Query: 29 ARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPS 88
+ S+IPMV+E +SRGER+YDI+SRLLKER+I ++G + D A+++VAQLLFLESE+P+
Sbjct: 16 GKKMSVIPMVVEQTSRGERSYDIYSRLLKERVIFLSGEVEDRMANLIVAQLLFLESEDPT 75
Query: 89 KPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPN 148
K I++Y+NSPGG VTAG+AIYDTMQ+I+ I T+C+GQA SMG+ LLA GT G+R ALPN
Sbjct: 76 KDINIYINSPGGSVTAGMAIYDTMQFIKPDIRTLCIGQACSMGAFLLAGGTAGKRAALPN 135
Query: 149 STIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTP 208
+ +MIHQP GG+ GQA D+ IH ++I+++ LN HTGQSIE I+K+ DRD FM+
Sbjct: 136 ARVMIHQPLGGFRGQASDIQIHAQEILKIKHTLNDRLAFHTGQSIERIEKDTDRDNFMSA 195
Query: 209 EEAKEFGIIDEVIDQR 224
EEA+ +G++DEV+ +R
Sbjct: 196 EEAQVYGLVDEVLVKR 211
>gi|224147635|ref|XP_002336515.1| predicted protein [Populus trichocarpa]
gi|222835812|gb|EEE74247.1| predicted protein [Populus trichocarpa]
Length = 201
Score = 255 bits (651), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 108/194 (55%), Positives = 157/194 (80%)
Query: 31 SFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKP 90
S L+PMV+E S+RGER++DI+SRLL++R+I +NG +ND + +V AQLLFLE+ENP KP
Sbjct: 4 SMMLVPMVVEQSARGERSFDIYSRLLRDRVIFLNGEVNDVVSALVCAQLLFLEAENPDKP 63
Query: 91 IHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNST 150
IH+Y+NSPGG +T+GLA+YDTMQ+I+SP++T+C+G A SMGS LL +G G R ALPN++
Sbjct: 64 IHLYINSPGGVITSGLAMYDTMQFIKSPVHTLCMGTARSMGSFLLMAGEPGHRMALPNAS 123
Query: 151 IMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEE 210
+ +HQP GG GQA D+ IH ++++R D + LY +H G+S E +++++DRD FMT EE
Sbjct: 124 LHVHQPLGGVQGQASDIRIHAEEMLRTKDRVTRLYAQHCGRSYEEVERDLDRDRFMTAEE 183
Query: 211 AKEFGIIDEVIDQR 224
A+E+G+ID+V+D+R
Sbjct: 184 AREWGLIDKVLDRR 197
>gi|332288867|ref|YP_004419719.1| ATP-dependent Clp protease proteolytic subunit [Gallibacterium
anatis UMN179]
gi|330431763|gb|AEC16822.1| ATP-dependent Clp protease proteolytic subunit [Gallibacterium
anatis UMN179]
Length = 195
Score = 255 bits (651), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 110/194 (56%), Positives = 156/194 (80%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E ++RGERA+DI+SRLLKER+I +NG + D+ A+++VAQLLFLE+ENP + I+
Sbjct: 2 ALVPMVVEQTARGERAFDIYSRLLKERVIFLNGQVEDNMANLIVAQLLFLEAENPDEDIN 61
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
+Y+NSPGG VTAG+AIYDTMQ+I+ + T+C+GQA SMG+ LLA G G+R ALP++ IM
Sbjct: 62 LYINSPGGVVTAGMAIYDTMQFIKPDVRTLCMGQACSMGAFLLAGGAAGKRFALPHARIM 121
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQP GGY GQA D+ IH ++I+++ D LN HTGQ +EV++++ DRD FM+ + AK
Sbjct: 122 IHQPLGGYRGQASDIQIHAQEILKIKDTLNQRLAFHTGQPLEVVERDTDRDNFMSAQAAK 181
Query: 213 EFGIIDEVIDQRPM 226
E+G+IDEV+ R +
Sbjct: 182 EYGLIDEVLTHRQL 195
>gi|404379126|ref|ZP_10984194.1| ATP-dependent Clp protease proteolytic subunit [Simonsiella
muelleri ATCC 29453]
gi|294483471|gb|EFG31156.1| ATP-dependent Clp protease proteolytic subunit [Simonsiella
muelleri ATCC 29453]
Length = 206
Score = 255 bits (651), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 117/194 (60%), Positives = 155/194 (79%), Gaps = 2/194 (1%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+LIP VIE S RGERA+DI+SRLLKERII + GP+ND TA++VVAQLLFLESENP K I+
Sbjct: 9 TLIPTVIEQSGRGERAFDIYSRLLKERIIFLVGPVNDHTANLVVAQLLFLESENPDKDIY 68
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
Y+NSPGG V+AG++I+DTM +I+ + T+CLGQAASMG+ LL++G KG+R ALPNS IM
Sbjct: 69 FYINSPGGSVSAGMSIFDTMNFIKPDVQTLCLGQAASMGAFLLSAGAKGKRFALPNSRIM 128
Query: 153 IHQP--SGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEE 210
IHQP SGG GQA D+ IH ++++++ + LN L KHTGQ +E I+++ DRD FM+ +
Sbjct: 129 IHQPLISGGLGGQASDIEIHARELIKLKEKLNNLLAKHTGQPLEKIERDTDRDNFMSAQT 188
Query: 211 AKEFGIIDEVIDQR 224
A E+G+ID+VI R
Sbjct: 189 AMEYGLIDKVITNR 202
>gi|444363684|ref|ZP_21164096.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Burkholderia cenocepacia BC7]
gi|444369902|ref|ZP_21169607.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Burkholderia cenocepacia K56-2Valvano]
gi|443594526|gb|ELT63169.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Burkholderia cenocepacia BC7]
gi|443598384|gb|ELT66748.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Burkholderia cenocepacia K56-2Valvano]
Length = 208
Score = 255 bits (651), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 114/197 (57%), Positives = 157/197 (79%)
Query: 29 ARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPS 88
A++ L+P+V+E S RGER+YDI+SRLLKER++ + G +ND TA++VVAQLLFLESENP
Sbjct: 12 AQALGLVPIVVETSGRGERSYDIYSRLLKERLVFMVGEVNDQTANLVVAQLLFLESENPD 71
Query: 89 KPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPN 148
K I +Y+NSPGG V+AG+AIYDTMQ+I+ ++T+C+G AASMG+ LLASG KG+R ALPN
Sbjct: 72 KDISLYINSPGGSVSAGMAIYDTMQFIKPDVSTLCMGLAASMGAFLLASGAKGKRFALPN 131
Query: 149 STIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTP 208
S +MIHQP GG GQA D+ I ++I+ + + LN L +HTGQ +E I ++ DRD FM+
Sbjct: 132 SRVMIHQPLGGARGQASDIEIQAREILYLKERLNNLLAQHTGQDVERIARDTDRDNFMSS 191
Query: 209 EEAKEFGIIDEVIDQRP 225
E+AK +G+ID+V+ +RP
Sbjct: 192 EDAKAYGLIDQVLLKRP 208
>gi|404399557|ref|ZP_10991141.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
fuscovaginae UPB0736]
Length = 211
Score = 255 bits (651), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 110/192 (57%), Positives = 155/192 (80%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
L+PMV+E S+RGERAYDI+SRLLKER+I + GP+ D A+++ AQLLFLE+ENP K IH+
Sbjct: 19 LVPMVVEQSARGERAYDIYSRLLKERVIFLVGPVEDYMANLICAQLLFLEAENPDKDIHL 78
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VTAG++IYDTMQ+I+ ++T C+GQA SMG+ LL +G +G+R LPNS +MI
Sbjct: 79 YINSPGGSVTAGMSIYDTMQFIKPNVSTTCIGQACSMGAFLLTAGAEGKRFCLPNSRVMI 138
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQP GG+ GQA D+ IH K+I+ + + LN L KH+G+++E I+++ +RD FM+ A+E
Sbjct: 139 HQPLGGFQGQASDIEIHAKEILFIRERLNTLMAKHSGRTLEEIERDTNRDNFMSATAARE 198
Query: 214 FGIIDEVIDQRP 225
+G+IDEVI++RP
Sbjct: 199 YGLIDEVIEKRP 210
>gi|399520089|ref|ZP_10760870.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
pseudoalcaligenes CECT 5344]
gi|399111981|emb|CCH37429.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
pseudoalcaligenes CECT 5344]
Length = 213
Score = 255 bits (651), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 113/193 (58%), Positives = 153/193 (79%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
L+PMVIE S+RGERAYDI+SRLLKER+I + GP+ D A+++ AQLLFLE+ENP K IH+
Sbjct: 19 LVPMVIEQSARGERAYDIYSRLLKERVIFLVGPVEDYMANLICAQLLFLEAENPDKDIHL 78
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VTAG+AIYDTMQ+I++ ++T C+GQA SMG+ LLA G KG+R LPNS +MI
Sbjct: 79 YINSPGGSVTAGMAIYDTMQFIKADVSTTCIGQACSMGAFLLAGGAKGKRFCLPNSRVMI 138
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQP GG+ GQA D+ IH K+I+ + + LN L +HTGQS+E I+++ +RD FM+ A E
Sbjct: 139 HQPLGGFQGQASDIEIHAKEILFIRERLNELLAQHTGQSLETIERDTNRDNFMSASRAVE 198
Query: 214 FGIIDEVIDQRPM 226
+G++D V ++R M
Sbjct: 199 YGLVDAVHEKRQM 211
>gi|190892539|ref|YP_001979081.1| ATP-dependent Clp protease proteolytic subunit [Rhizobium etli CIAT
652]
gi|218516193|ref|ZP_03513033.1| ATP-dependent Clp protease proteolytic subunit [Rhizobium etli
8C-3]
gi|190697818|gb|ACE91903.1| endopeptidase Clp protein, subunit 1 [Rhizobium etli CIAT 652]
Length = 203
Score = 255 bits (651), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 112/194 (57%), Positives = 154/194 (79%)
Query: 31 SFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKP 90
+ L+PMVIE SSRGER++DI+SRLL+ERII +NG +ND + +V AQLLFLE+ENP+KP
Sbjct: 4 AMQLVPMVIEQSSRGERSFDIYSRLLRERIIFLNGEVNDTVSALVCAQLLFLEAENPNKP 63
Query: 91 IHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNST 150
I++Y+NSPGG VT+GLA+YDTM++I +P++T+C+G A SMGS LL +G GER ALPN++
Sbjct: 64 INLYINSPGGAVTSGLAMYDTMRFIHAPVHTLCMGTARSMGSFLLMAGEPGERAALPNAS 123
Query: 151 IMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEE 210
I+IHQPSGG+ GQA DM IH ++I++ + LY +H G+S E ++ MDRD FMT EE
Sbjct: 124 ILIHQPSGGFQGQASDMLIHAEEILKTKQRMTRLYAEHCGRSYEDFERGMDRDRFMTAEE 183
Query: 211 AKEFGIIDEVIDQR 224
A E+G+ID ++ R
Sbjct: 184 ALEWGLIDRILKVR 197
>gi|88860444|ref|ZP_01135082.1| ATP-dependent Clp protease proteolytic subunit [Pseudoalteromonas
tunicata D2]
gi|88817642|gb|EAR27459.1| ATP-dependent Clp protease proteolytic subunit [Pseudoalteromonas
tunicata D2]
Length = 205
Score = 255 bits (651), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 112/194 (57%), Positives = 153/194 (78%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E +++GER+YDI+SRLLKER+I + G + D A+++VAQLLFLESENP K I
Sbjct: 11 ALVPMVVEQTAKGERSYDIYSRLLKERVIFLTGQVEDHMANLIVAQLLFLESENPEKDIF 70
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
+Y+NSPGG VTAG+AIYDTM +I+ ++T+C+GQAASMG+ LL+ GTKG+R LPNS +M
Sbjct: 71 IYINSPGGSVTAGMAIYDTMNFIKPNVSTVCMGQAASMGAFLLSGGTKGKRFCLPNSRVM 130
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQP GG+ GQA D IH ++I+ + D LN L +HTGQ IEVI ++ DRD FM+ +A
Sbjct: 131 IHQPLGGFQGQASDFEIHAREILSIKDKLNRLLAEHTGQPIEVISRDTDRDNFMSGAQAV 190
Query: 213 EFGIIDEVIDQRPM 226
E+GI+D V+ QR +
Sbjct: 191 EYGIVDAVLTQRDL 204
>gi|304437034|ref|ZP_07396997.1| ATP-dependent Clp protease proteolytic subunit [Selenomonas sp.
oral taxon 149 str. 67H29BP]
gi|304369985|gb|EFM23647.1| ATP-dependent Clp protease proteolytic subunit [Selenomonas sp.
oral taxon 149 str. 67H29BP]
Length = 203
Score = 255 bits (651), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 117/187 (62%), Positives = 150/187 (80%)
Query: 35 IPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHMY 94
+PMV+E S RGERAYDI+SRLLKERII + GPI+D A+V+VAQ+LFLESE+P K IH+Y
Sbjct: 5 VPMVVETSGRGERAYDIYSRLLKERIIFLGGPIDDSVANVIVAQMLFLESEDPDKDIHLY 64
Query: 95 LNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMIH 154
+NSPGG VTAGLAIYDTMQYI+ ++TIC+GQAASMGS+LL +G KG+R ALP++ IMIH
Sbjct: 65 INSPGGVVTAGLAIYDTMQYIKPDVSTICVGQAASMGSILLTAGAKGKRYALPHARIMIH 124
Query: 155 QPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKEF 214
QP GG GQ+ D+ I K+I+R+ + N + HTGQ E I + +RD FM+ EEAKE+
Sbjct: 125 QPLGGAQGQSTDIQIQAKEILRLREVGNEILAHHTGQDTEKINVDTERDNFMSAEEAKEY 184
Query: 215 GIIDEVI 221
G+IDEV+
Sbjct: 185 GLIDEVV 191
>gi|229591362|ref|YP_002873481.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
fluorescens SBW25]
gi|259585962|sp|C3JYK0.1|CLPP_PSEFS RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|229363228|emb|CAY50311.1| ATP-dependent Clp protease proteolytic subunit ClpP [Pseudomonas
fluorescens SBW25]
Length = 211
Score = 255 bits (651), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 110/192 (57%), Positives = 154/192 (80%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
L+PMV+E S+RGERAYDI+SRLLKER+I + GP+ D A+++ AQLLFLE+ENP K IH+
Sbjct: 19 LVPMVVEQSARGERAYDIYSRLLKERVIFLVGPVEDYMANLICAQLLFLEAENPDKDIHL 78
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VTAG++IYDTMQ+I+ ++T C+GQA SMG+ LL +G +G+R LPNS +MI
Sbjct: 79 YINSPGGSVTAGMSIYDTMQFIKPNVSTTCIGQACSMGAFLLTAGAEGKRFCLPNSRVMI 138
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQP GG+ GQA D+ IH K+I+ + + LN L KH+G ++E I+++ +RD FM+ E A++
Sbjct: 139 HQPLGGFQGQASDIEIHAKEILFIRERLNTLMAKHSGHTLEEIERDTNRDNFMSAEAARD 198
Query: 214 FGIIDEVIDQRP 225
+G+ID VID+RP
Sbjct: 199 YGLIDAVIDKRP 210
>gi|444375828|ref|ZP_21175080.1| ATP-dependent Clp protease proteolytic subunit [Enterovibrio sp.
AK16]
gi|443680056|gb|ELT86704.1| ATP-dependent Clp protease proteolytic subunit [Enterovibrio sp.
AK16]
Length = 207
Score = 255 bits (651), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 110/192 (57%), Positives = 153/192 (79%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E +SRGER+YDI+SRLLKER+I + G + D A++VVAQLLFLESENP K I
Sbjct: 15 ALVPMVVEQTSRGERSYDIYSRLLKERVIFLTGQVEDHMANLVVAQLLFLESENPDKDIF 74
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
+Y+NSPGG VTAG++IYDTMQYI+ ++T+C+GQA SMG+ LLA G KG+R LPNS +M
Sbjct: 75 LYINSPGGSVTAGMSIYDTMQYIKPDVSTVCMGQACSMGAFLLAGGAKGKRYCLPNSRVM 134
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQP GG+ GQA D+ IH ++I+ + LN L +HTGQ +EVI+++ DRD FM ++A
Sbjct: 135 IHQPLGGFQGQASDIQIHAQEILTIKQKLNTLLAEHTGQPLEVIERDTDRDNFMAAQDAA 194
Query: 213 EFGIIDEVIDQR 224
++G++D V+++R
Sbjct: 195 DYGLVDAVLNKR 206
>gi|222148264|ref|YP_002549221.1| ATP-dependent Clp protease proteolytic subunit [Agrobacterium vitis
S4]
gi|221735252|gb|ACM36215.1| ATP-dependent Clp protease proteolytic subunit ClpP [Agrobacterium
vitis S4]
Length = 210
Score = 255 bits (651), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 112/194 (57%), Positives = 155/194 (79%)
Query: 31 SFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKP 90
+ +L+PMV+E ++RGER+YDI+SRLLKERII + GP+ D A +V AQLLFLE+ENP K
Sbjct: 8 AMALVPMVVEQTNRGERSYDIYSRLLKERIIFLTGPVEDHMASLVCAQLLFLEAENPKKE 67
Query: 91 IHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNST 150
I +Y+NSPGG VTAG+AIYDTMQ+IR ++T+C+GQAASMGSLLLA+G KG R A PN+
Sbjct: 68 IAIYINSPGGVVTAGMAIYDTMQFIRPAVSTLCVGQAASMGSLLLAAGEKGMRFATPNAR 127
Query: 151 IMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEE 210
IM+HQPSGG+ GQA D+ H + I+++ LN +Y KHTG+++E ++ +DRD+FM E
Sbjct: 128 IMVHQPSGGFQGQASDIERHARDIIKMKRRLNEVYVKHTGRTLEEVEHTLDRDHFMESTE 187
Query: 211 AKEFGIIDEVIDQR 224
AK++G+ID+++ R
Sbjct: 188 AKDWGLIDKILTTR 201
>gi|312961789|ref|ZP_07776287.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
fluorescens WH6]
gi|395495006|ref|ZP_10426585.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas sp.
PAMC 25886]
gi|395794594|ref|ZP_10473915.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas sp.
Ag1]
gi|421137891|ref|ZP_15597967.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
fluorescens BBc6R8]
gi|311284048|gb|EFQ62631.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
fluorescens WH6]
gi|395341259|gb|EJF73079.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas sp.
Ag1]
gi|404510950|gb|EKA24844.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
fluorescens BBc6R8]
Length = 211
Score = 255 bits (651), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 110/192 (57%), Positives = 154/192 (80%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
L+PMV+E S+RGERAYDI+SRLLKER+I + GP+ D A+++ AQLLFLE+ENP K IH+
Sbjct: 19 LVPMVVEQSARGERAYDIYSRLLKERVIFLVGPVEDYMANLICAQLLFLEAENPDKDIHL 78
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VTAG++IYDTMQ+I+ ++T C+GQA SMG+ LL +G +G+R LPNS +MI
Sbjct: 79 YINSPGGSVTAGMSIYDTMQFIKPNVSTTCIGQACSMGAFLLTAGAEGKRYCLPNSRVMI 138
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQP GG+ GQA D+ IH K+I+ + + LN L KH+G ++E I+++ +RD FM+ E A+E
Sbjct: 139 HQPLGGFQGQASDIEIHAKEILFIRERLNTLMAKHSGHTLEEIERDTNRDNFMSAEAARE 198
Query: 214 FGIIDEVIDQRP 225
+G+ID VI++RP
Sbjct: 199 YGLIDAVIEKRP 210
>gi|206890175|ref|YP_002248104.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermodesulfovibrio yellowstonii DSM 11347]
gi|226706554|sp|B5YI38.1|CLPP_THEYD RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|206742113|gb|ACI21170.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermodesulfovibrio yellowstonii DSM 11347]
Length = 195
Score = 255 bits (651), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 116/189 (61%), Positives = 153/189 (80%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
S++P+VIE + R ER YDI+SRLLK+RII I IND A+VV+AQLLFL++E+P K IH
Sbjct: 2 SIVPIVIEQTGRTERVYDIYSRLLKDRIIFIGTEINDHVANVVIAQLLFLQTEDPEKDIH 61
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
+Y+NSPGG V++GLAIYDTMQY++ I T C+GQA+SM +LLA+GTKG+R ALP+S +M
Sbjct: 62 IYINSPGGMVSSGLAIYDTMQYVKPDIATYCIGQASSMACVLLAAGTKGKRFALPHSRVM 121
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQP GG+ GQA D+ IH K+I+++ D LN + KHTGQ IE IQK+ +RD+FM+ EEAK
Sbjct: 122 IHQPIGGFYGQATDVEIHAKEILKMKDLLNNILAKHTGQPIEKIQKDTERDFFMSAEEAK 181
Query: 213 EFGIIDEVI 221
+GI+DEVI
Sbjct: 182 LYGIVDEVI 190
>gi|326427885|gb|EGD73455.1| ATP-dependent Clp protease proteolytic subunit [Salpingoeca sp.
ATCC 50818]
Length = 267
Score = 255 bits (651), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 114/196 (58%), Positives = 153/196 (78%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
SL+P+VIE + RGERAYDIFSRLL+ERI+C+ GP+ND+ + ++ AQLL+LESENP + IH
Sbjct: 58 SLVPIVIEQTHRGERAYDIFSRLLRERIVCLMGPVNDELSSLITAQLLYLESENPEETIH 117
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
MY+NSPGG VTAGL IYDTMQY++ I T+C+GQA SMGSLLL +G KG R ALP+S IM
Sbjct: 118 MYINSPGGSVTAGLGIYDTMQYVKPKIATLCVGQACSMGSLLLTAGAKGHRYALPHSRIM 177
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
+HQPSGG GQA D+ I ++I+++ + + +Y +HTGQ VI +++RD F++ EA
Sbjct: 178 VHQPSGGAYGQATDIQIQAEEILKLKNTICDIYVQHTGQPHSVIYDSLERDKFLSAGEAS 237
Query: 213 EFGIIDEVIDQRPMAL 228
EFG+IDEV+ R A+
Sbjct: 238 EFGLIDEVVATRKAAV 253
>gi|188534634|ref|YP_001908431.1| ATP-dependent Clp protease proteolytic subunit [Erwinia
tasmaniensis Et1/99]
gi|188029676|emb|CAO97555.1| Putative ATP-dependent Clp protease proteolytic subunit [Erwinia
tasmaniensis Et1/99]
Length = 207
Score = 255 bits (651), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 108/199 (54%), Positives = 157/199 (78%)
Query: 26 QISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESE 85
+++A +L+PMV+E +SRGER+YDI+SRLLKERII + G + D A+++VAQ+LFLE+E
Sbjct: 8 ELTAPHMALVPMVVEQTSRGERSYDIYSRLLKERIIFLTGQVEDHMANLIVAQMLFLEAE 67
Query: 86 NPSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRA 145
NP K IH+Y+NSPGG +TAG++IYDTMQ+I+ ++TIC+GQA SMG+ LL +G KG+R
Sbjct: 68 NPEKDIHLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQACSMGAFLLTAGAKGKRYC 127
Query: 146 LPNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYF 205
LPNS +MIHQP GG+ GQA D+ IH ++I++ +N L KHTGQ+IE I+++ +RD F
Sbjct: 128 LPNSRVMIHQPLGGFQGQASDIDIHAREIIKTKQMMNELMAKHTGQTIETIERDTNRDRF 187
Query: 206 MTPEEAKEFGIIDEVIDQR 224
++ E+ E+G++D V+ QR
Sbjct: 188 LSASESVEYGLVDSVLAQR 206
>gi|84387735|ref|ZP_00990751.1| ATP-dependent Clp protease proteolytic subunit [Vibrio splendidus
12B01]
gi|218710174|ref|YP_002417795.1| ATP-dependent Clp protease proteolytic subunit [Vibrio splendidus
LGP32]
gi|407071670|ref|ZP_11102508.1| ATP-dependent Clp protease proteolytic subunit [Vibrio
cyclitrophicus ZF14]
gi|417949951|ref|ZP_12593080.1| ATP-dependent Clp protease proteolytic subunit [Vibrio splendidus
ATCC 33789]
gi|254763809|sp|B7VI00.1|CLPP_VIBSL RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|84377418|gb|EAP94285.1| ATP-dependent Clp protease proteolytic subunit [Vibrio splendidus
12B01]
gi|218323193|emb|CAV19370.1| ATP-dependent Clp protease proteolytic subunit [Vibrio splendidus
LGP32]
gi|342807381|gb|EGU42570.1| ATP-dependent Clp protease proteolytic subunit [Vibrio splendidus
ATCC 33789]
Length = 208
Score = 255 bits (651), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 110/192 (57%), Positives = 154/192 (80%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E +SRGER+YDI+SRLLKERII + G + D A++VVAQLLFLESENP K I+
Sbjct: 15 ALVPMVVEQTSRGERSYDIYSRLLKERIIFLTGQVEDHMANLVVAQLLFLESENPDKDIY 74
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
+Y+NSPGG VTAG++IYDTMQ+I+ ++T+C+GQA SMG+ LLA GT G+R LPNS +M
Sbjct: 75 LYINSPGGSVTAGMSIYDTMQFIKPNVSTVCMGQACSMGAFLLAGGTPGKRHVLPNSRVM 134
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQP GG+ GQA D+ IH ++I+ + LN L +HTGQ +EV++++ DRD FM+ ++A
Sbjct: 135 IHQPLGGFQGQASDIQIHAQEILTIKQKLNKLLAEHTGQPLEVVERDTDRDNFMSADQAV 194
Query: 213 EFGIIDEVIDQR 224
E+G++D V++ R
Sbjct: 195 EYGLVDSVLNHR 206
>gi|336365751|gb|EGN94100.1| hypothetical protein SERLA73DRAFT_188682 [Serpula lacrymans var.
lacrymans S7.3]
gi|336378353|gb|EGO19511.1| hypothetical protein SERLADRAFT_479029 [Serpula lacrymans var.
lacrymans S7.9]
Length = 246
Score = 254 bits (650), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 118/201 (58%), Positives = 154/201 (76%), Gaps = 7/201 (3%)
Query: 28 SARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENP 87
S+ + +L+P+VIE + RGER+YDIFSRLL+ER+I + GPI D + + VAQLLFLE+E
Sbjct: 33 SSPTANLVPIVIEQTGRGERSYDIFSRLLRERVIMLYGPIRDTDSALTVAQLLFLEAEES 92
Query: 88 SKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALP 147
SKPIH+Y+NSPGG VTAGLAIYDTMQY+ SPI+T C+GQA SMGSLLLA+G KG+R LP
Sbjct: 93 SKPIHLYINSPGGSVTAGLAIYDTMQYVSSPIHTYCVGQACSMGSLLLAAGAKGKRHCLP 152
Query: 148 NSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQ-------SIEVIQKNM 200
N++IMIHQPSGG SGQA D+ IH K+I+RV L +Y +H + +E ++ +
Sbjct: 153 NASIMIHQPSGGASGQASDIAIHAKEILRVRQLLTGIYQRHCAKEGETEAAGLERFERAL 212
Query: 201 DRDYFMTPEEAKEFGIIDEVI 221
+RDYFMT EA EFGI+D ++
Sbjct: 213 ERDYFMTAREALEFGIVDGIL 233
>gi|254421111|ref|ZP_05034835.1| Clp protease [Brevundimonas sp. BAL3]
gi|196187288|gb|EDX82264.1| Clp protease [Brevundimonas sp. BAL3]
Length = 215
Score = 254 bits (650), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 115/201 (57%), Positives = 152/201 (75%)
Query: 27 ISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESEN 86
I + +L+PMV+E SSRGER++DIFSRLL+ERII + GP D A ++ AQLLFLESEN
Sbjct: 5 IELMNMNLVPMVVEQSSRGERSFDIFSRLLRERIIFLTGPFEDTMASLICAQLLFLESEN 64
Query: 87 PSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRAL 146
P K I MY+NSPGGQV++ LAIYDTMQYI+SP++T+ +G AAS GSL+L +G G+R AL
Sbjct: 65 PKKEISMYINSPGGQVSSALAIYDTMQYIKSPVSTVVMGMAASAGSLILTAGAAGQRIAL 124
Query: 147 PNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFM 206
PN+ IM+HQPSGG+ GQA D+ +H I LN +Y HTG++ E ++K +DRD+FM
Sbjct: 125 PNARIMVHQPSGGFRGQASDIELHAADIRYTKKRLNEIYVHHTGRTYEEVEKTLDRDHFM 184
Query: 207 TPEEAKEFGIIDEVIDQRPMA 227
+ EEAK +GI+D V D+R A
Sbjct: 185 SAEEAKAWGIVDHVYDKREQA 205
>gi|195952528|ref|YP_002120818.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Hydrogenobaculum sp. Y04AAS1]
gi|195932140|gb|ACG56840.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Hydrogenobaculum sp. Y04AAS1]
Length = 205
Score = 254 bits (650), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 114/191 (59%), Positives = 155/191 (81%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
L+P+V+E + RGERAYDI+SRLL++RI+ + PI+D A+++VAQLLFLE+++P K I M
Sbjct: 14 LVPIVVEQTPRGERAYDIYSRLLQDRIVILGFPIDDHVANLIVAQLLFLEAQDPEKDIQM 73
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VTAGLAIYDTMQYI+ + TIC+GQAASMG++LLA+GTKG+R ALPN+ IMI
Sbjct: 74 YINSPGGSVTAGLAIYDTMQYIKPDVTTICIGQAASMGAVLLAAGTKGKRFALPNARIMI 133
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQP GG GQA D+ IH ++I R+ LN + TG+++ I+K++DRDYFM+ EEAK
Sbjct: 134 HQPLGGVQGQATDILIHAEEIKRIKHILNTILANATGKNLRQIEKDVDRDYFMSAEEAKN 193
Query: 214 FGIIDEVIDQR 224
+G+ID+VI +R
Sbjct: 194 YGLIDKVITKR 204
>gi|90417350|ref|ZP_01225275.1| ATP-dependent Clp protease, proteolytic subunit ClpP [gamma
proteobacterium HTCC2207]
gi|90330792|gb|EAS46061.1| ATP-dependent Clp protease, proteolytic subunit ClpP [marine gamma
proteobacterium HTCC2207]
Length = 213
Score = 254 bits (650), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 111/191 (58%), Positives = 155/191 (81%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
L+PMV+E +SRGERAYDI+SRLLKER+I + G + D A+++VAQ+LFLESENP K IH+
Sbjct: 19 LVPMVVEQTSRGERAYDIYSRLLKERVIFLVGQVEDHMANLIVAQMLFLESENPDKDIHL 78
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VTAG++IYDTMQ+I+ ++T+C+GQAASMG+ LLA+G +G+R LPNS MI
Sbjct: 79 YINSPGGSVTAGMSIYDTMQFIKPNVSTMCIGQAASMGAFLLAAGAEGKRYCLPNSRTMI 138
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQPSGG GQA D+ I +++I+++ LN L KHTGQS+E + ++ +RD FM+ EE+K
Sbjct: 139 HQPSGGAQGQATDIHIQSQEILKIKSRLNNLMAKHTGQSVEKVTEDTERDNFMSAEESKA 198
Query: 214 FGIIDEVIDQR 224
+G++D+V+D R
Sbjct: 199 YGLVDDVLDSR 209
>gi|121534156|ref|ZP_01665981.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermosinus
carboxydivorans Nor1]
gi|121307259|gb|EAX48176.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermosinus
carboxydivorans Nor1]
Length = 203
Score = 254 bits (650), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 114/190 (60%), Positives = 153/190 (80%)
Query: 32 FSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPI 91
+ +P+V+E S+RGERAYDI+SRLLK+RI+ I GPI+D A++V+AQLLFLESE+P K I
Sbjct: 1 MTFVPIVVEQSNRGERAYDIYSRLLKDRIVFIGGPIDDHVANLVIAQLLFLESEDPDKDI 60
Query: 92 HMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTI 151
H+Y+NSPGG VTAGLAIYDTMQYI+ ++TICLG AASM ++LLA+G G+R ALP + +
Sbjct: 61 HLYINSPGGVVTAGLAIYDTMQYIKPDVSTICLGSAASMAAVLLAAGAPGKRYALPYARV 120
Query: 152 MIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEA 211
MIHQP GG GQA D+ I ++I+R+ + LN + +HTG+ +E IQ + +RDYFM+ EEA
Sbjct: 121 MIHQPLGGAQGQATDIQIQAREILRLREILNDILARHTGKPLERIQHDTERDYFMSSEEA 180
Query: 212 KEFGIIDEVI 221
KE+GIID V+
Sbjct: 181 KEYGIIDAVV 190
>gi|86148885|ref|ZP_01067136.1| ATP-dependent Clp protease proteolytic subunit, partial [Vibrio sp.
MED222]
gi|85833328|gb|EAQ51535.1| ATP-dependent Clp protease proteolytic subunit [Vibrio sp. MED222]
Length = 198
Score = 254 bits (650), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 110/192 (57%), Positives = 154/192 (80%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E +SRGER+YDI+SRLLKERII + G + D A++VVAQLLFLESENP K I+
Sbjct: 5 ALVPMVVEQTSRGERSYDIYSRLLKERIIFLTGQVEDHMANLVVAQLLFLESENPDKDIY 64
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
+Y+NSPGG VTAG++IYDTMQ+I+ ++T+C+GQA SMG+ LLA GT G+R LPNS +M
Sbjct: 65 LYINSPGGSVTAGMSIYDTMQFIKPNVSTVCMGQACSMGAFLLAGGTPGKRHVLPNSRVM 124
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQP GG+ GQA D+ IH ++I+ + LN L +HTGQ +EV++++ DRD FM+ ++A
Sbjct: 125 IHQPLGGFQGQASDIQIHAQEILTIKQKLNKLLAEHTGQPLEVVERDTDRDNFMSADQAV 184
Query: 213 EFGIIDEVIDQR 224
E+G++D V++ R
Sbjct: 185 EYGLVDSVLNHR 196
>gi|388468796|ref|ZP_10143006.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
synxantha BG33R]
gi|388012376|gb|EIK73563.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
synxantha BG33R]
Length = 211
Score = 254 bits (650), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 110/192 (57%), Positives = 154/192 (80%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
L+PMV+E S+RGERAYDI+SRLLKER+I + GP+ D A+++ AQLLFLE+ENP K IH+
Sbjct: 19 LVPMVVEQSARGERAYDIYSRLLKERVIFLVGPVEDYMANLICAQLLFLEAENPDKDIHL 78
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VTAG++IYDTMQ+I+ ++T C+GQA SMG+ LL +G +G+R LPNS +MI
Sbjct: 79 YINSPGGSVTAGMSIYDTMQFIKPNVSTTCIGQACSMGAFLLTAGAEGKRFCLPNSRVMI 138
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQP GG+ GQA D+ IH K+I+ + + LN L KH+G ++E I+++ +RD FM+ E A+E
Sbjct: 139 HQPLGGFQGQASDIEIHAKEILFIRERLNTLMAKHSGHTLEEIERDTNRDNFMSAEAARE 198
Query: 214 FGIIDEVIDQRP 225
+G+ID VI++RP
Sbjct: 199 YGLIDAVIEKRP 210
>gi|271499597|ref|YP_003332622.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Dickeya
dadantii Ech586]
gi|270343152|gb|ACZ75917.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Dickeya
dadantii Ech586]
Length = 207
Score = 254 bits (650), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 110/196 (56%), Positives = 157/196 (80%)
Query: 29 ARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPS 88
A +L+PMV+E +SRGER+YDI+SRLLKER+I + G + D A+++VAQ+LFLE+ENP
Sbjct: 11 APHMALVPMVVEQTSRGERSYDIYSRLLKERVIFLTGQVEDYMANLIVAQMLFLEAENPE 70
Query: 89 KPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPN 148
K I++Y+NSPGG +TAG++IYDTMQ+I+ ++TIC+GQAASMG+ LL +GTKG+R LPN
Sbjct: 71 KDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGTKGKRFCLPN 130
Query: 149 STIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTP 208
S +MIHQP GG+ GQA D+ IH K+I++V +N L KHTGQS++VI+++ +RD F++
Sbjct: 131 SRVMIHQPLGGFQGQATDIEIHAKEILKVKARMNELMAKHTGQSLDVIERDTERDRFLSA 190
Query: 209 EEAKEFGIIDEVIDQR 224
EA E+G++D V+ R
Sbjct: 191 AEAVEYGLVDSVLTHR 206
>gi|145635952|ref|ZP_01791637.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
influenzae PittAA]
gi|319897851|ref|YP_004136048.1| ATP-dependent clp protease proteolytic subunit [Haemophilus
influenzae F3031]
gi|378696913|ref|YP_005178871.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Haemophilus influenzae 10810]
gi|145266785|gb|EDK06804.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
influenzae PittAA]
gi|301169432|emb|CBW29032.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Haemophilus influenzae 10810]
gi|317433357|emb|CBY81736.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
influenzae F3031]
Length = 193
Score = 254 bits (650), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 114/192 (59%), Positives = 156/192 (81%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
S+IPMV+E +SRGER+YDI+SRLLKER+I ++G + D A+++VAQLLFLESE+P+K I+
Sbjct: 2 SVIPMVVEQTSRGERSYDIYSRLLKERVIFLSGEVEDRMANLIVAQLLFLESEDPTKDIN 61
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
+Y+NSPGG VTAG+AIYDTMQ+I+ I T+C+GQA SMG+ LLA GT G+R ALPN+ +M
Sbjct: 62 IYINSPGGSVTAGMAIYDTMQFIKPDIRTLCIGQACSMGAFLLAGGTAGKRAALPNARVM 121
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQP GG+ GQA D+ IH ++I+++ LN HTGQSIE I+K+ DRD FM+ EEA+
Sbjct: 122 IHQPLGGFRGQASDIQIHAQEILKIKHTLNDRLAFHTGQSIERIEKDTDRDNFMSAEEAQ 181
Query: 213 EFGIIDEVIDQR 224
+G++DEV+ +R
Sbjct: 182 VYGLVDEVLVKR 193
>gi|332528101|ref|ZP_08404132.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Rubrivivax
benzoatilyticus JA2]
gi|332112672|gb|EGJ12465.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Rubrivivax
benzoatilyticus JA2]
Length = 202
Score = 254 bits (650), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 112/198 (56%), Positives = 155/198 (78%)
Query: 27 ISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESEN 86
I ++PMVIE S RGERAYDI+SRLL+ERI+ + GP+ND A++V AQLLFLESEN
Sbjct: 4 IETTGLGMVPMVIEQSGRGERAYDIYSRLLRERIVFLVGPVNDQVANLVCAQLLFLESEN 63
Query: 87 PSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRAL 146
P K I +Y+NSPGG V+AGL+I+DTM +I+ ++T+C+G AASMGS LL +G KG+R AL
Sbjct: 64 PDKDISLYINSPGGSVSAGLSIFDTMNFIKPEVSTLCMGMAASMGSFLLMAGAKGKRFAL 123
Query: 147 PNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFM 206
PNS +MIHQPSGG GQA D+ I ++I++ + LN +Y + TGQSIE I +M+RD ++
Sbjct: 124 PNSRVMIHQPSGGAQGQASDIEIQAREIIKTREQLNRIYAERTGQSIEKIAADMERDMWL 183
Query: 207 TPEEAKEFGIIDEVIDQR 224
+P EAK++G+ID+V+++R
Sbjct: 184 SPGEAKDYGLIDQVLEKR 201
>gi|254504144|ref|ZP_05116295.1| Clp protease [Labrenzia alexandrii DFL-11]
gi|222440215|gb|EEE46894.1| Clp protease [Labrenzia alexandrii DFL-11]
Length = 213
Score = 254 bits (650), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 113/192 (58%), Positives = 156/192 (81%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E ++RGERA+DI+SRLLKERII + GP+ D A +V AQLL+LE++NPSK I
Sbjct: 11 TLVPMVVEQTNRGERAFDIYSRLLKERIIFLTGPVEDHMATLVSAQLLYLEADNPSKEIA 70
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
+Y+NSPGG VT+GLAIYDTMQ+IR ++T+C+GQAASMGSLLLA+G K R LPN+ +M
Sbjct: 71 IYINSPGGLVTSGLAIYDTMQFIRPSVSTLCIGQAASMGSLLLAAGEKDMRFILPNARVM 130
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
+HQPSGG+ GQA D+ +H ++I+ + LN +Y KHTG+S++ +++ ++RD FMT E+AK
Sbjct: 131 VHQPSGGFRGQAADIMLHAQEILAMKRRLNEIYVKHTGRSLDQVEEALERDNFMTAEKAK 190
Query: 213 EFGIIDEVIDQR 224
EFGI+D VI R
Sbjct: 191 EFGIVDSVITDR 202
>gi|241203529|ref|YP_002974625.1| ATP-dependent Clp protease proteolytic subunit [Rhizobium
leguminosarum bv. trifolii WSM1325]
gi|240857419|gb|ACS55086.1| Endopeptidase Clp [Rhizobium leguminosarum bv. trifolii WSM1325]
Length = 203
Score = 254 bits (650), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 112/194 (57%), Positives = 153/194 (78%)
Query: 31 SFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKP 90
+ L+PMVIE SSRGER++DI+SRLL+ERII +NG +ND + +V AQLLFLE+ENP KP
Sbjct: 4 AMQLVPMVIEQSSRGERSFDIYSRLLRERIIFLNGEVNDTVSALVCAQLLFLEAENPKKP 63
Query: 91 IHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNST 150
I++Y+NSPGG VT+GLA+YDTM++IR+P++T+C+G A SMGS LL +G G R ALPN++
Sbjct: 64 INLYINSPGGVVTSGLAMYDTMRFIRAPVHTLCMGTARSMGSFLLMAGEAGGRAALPNAS 123
Query: 151 IMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEE 210
I+IHQPSGG+ GQA DM IH ++I++ + LY +H G+S E ++ MDRD FMT EE
Sbjct: 124 ILIHQPSGGFQGQASDMMIHAEEILKTKQRMTRLYAEHCGRSYEDFERGMDRDRFMTAEE 183
Query: 211 AKEFGIIDEVIDQR 224
A E+G+ID ++ R
Sbjct: 184 ALEWGLIDRILTVR 197
>gi|329114674|ref|ZP_08243433.1| ATP-dependent Clp protease proteolytic subunit 1 [Acetobacter
pomorum DM001]
gi|326696154|gb|EGE47836.1| ATP-dependent Clp protease proteolytic subunit 1 [Acetobacter
pomorum DM001]
Length = 237
Score = 254 bits (650), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 114/191 (59%), Positives = 154/191 (80%)
Query: 31 SFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKP 90
S +L+PMV+E +SRGERA+DI+SRLL+ERII + GP+ D A ++ AQLL+LES NP+K
Sbjct: 31 SNALVPMVVEQTSRGERAFDIYSRLLQERIIFLTGPVYDQVASLISAQLLYLESVNPNKE 90
Query: 91 IHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNST 150
I Y+NSPGG V+AGLAIYDTMQYIRSP++T+C+GQAASMGSLLLA G KG R ALPN+
Sbjct: 91 ISFYINSPGGVVSAGLAIYDTMQYIRSPVSTVCIGQAASMGSLLLAGGEKGRRFALPNAR 150
Query: 151 IMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEE 210
+M+HQPSGG GQA D+ I ++I+ + LN +Y +HTG+++E I++ ++RD +M+ E
Sbjct: 151 VMVHQPSGGAQGQASDIEIQAREILIIRQKLNEIYREHTGRTLEEIEQKLERDTYMSAHE 210
Query: 211 AKEFGIIDEVI 221
A+ FGI+DEVI
Sbjct: 211 AQSFGIVDEVI 221
>gi|334344659|ref|YP_004553211.1| ATP-dependent Clp protease proteolytic subunit [Sphingobium
chlorophenolicum L-1]
gi|334101281|gb|AEG48705.1| ATP-dependent Clp protease proteolytic subunit [Sphingobium
chlorophenolicum L-1]
Length = 211
Score = 254 bits (650), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 115/198 (58%), Positives = 155/198 (78%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+P+VIE S+RGER++DI+SRLL+ERII + G + D A ++VAQLLFLESENP K I
Sbjct: 11 ALVPIVIEQSNRGERSFDIYSRLLRERIIFVTGQVEDHMASLIVAQLLFLESENPKKDIW 70
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
MY+NSPGG VT+G+AI+DTM+YIR + T+C+GQAASMGS LLA+G G+R AL N+ IM
Sbjct: 71 MYINSPGGVVTSGMAIHDTMKYIRPQVGTVCIGQAASMGSFLLAAGEPGKRIALSNARIM 130
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
+HQPSGG G A D+ I K+I+R+ LN LY ++TG+++E +++ MDRD F+ EEAK
Sbjct: 131 VHQPSGGAQGMASDIEIQAKEILRIRSRLNNLYVQYTGRTLEEVERAMDRDTFLEAEEAK 190
Query: 213 EFGIIDEVIDQRPMALVT 230
FG++DEV D+RP A T
Sbjct: 191 AFGLVDEVFDRRPAAAET 208
>gi|161524522|ref|YP_001579534.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
multivorans ATCC 17616]
gi|189350722|ref|YP_001946350.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
multivorans ATCC 17616]
gi|221198217|ref|ZP_03571263.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
multivorans CGD2M]
gi|221209201|ref|ZP_03582193.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
multivorans CGD2]
gi|254252156|ref|ZP_04945474.1| Peptidase S14 [Burkholderia dolosa AUO158]
gi|416986795|ref|ZP_11938505.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia sp.
TJI49]
gi|124894765|gb|EAY68645.1| Peptidase S14 [Burkholderia dolosa AUO158]
gi|160341951|gb|ABX15037.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
multivorans ATCC 17616]
gi|189334744|dbj|BAG43814.1| ATP-dependent Clp protease [Burkholderia multivorans ATCC 17616]
gi|221170939|gb|EEE03394.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
multivorans CGD2]
gi|221182149|gb|EEE14550.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
multivorans CGD2M]
gi|325518991|gb|EGC98514.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia sp.
TJI49]
Length = 217
Score = 254 bits (650), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 114/199 (57%), Positives = 157/199 (78%)
Query: 27 ISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESEN 86
A++ L+P+V+E S RGER+YDI+SRLLKER++ + G +ND TA++VVAQLLFLESEN
Sbjct: 19 FEAQALGLVPIVVETSGRGERSYDIYSRLLKERLVFMVGEVNDQTANLVVAQLLFLESEN 78
Query: 87 PSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRAL 146
P K I +Y+NSPGG V+AG+AIYDTMQ+I+ ++T+C+G AASMG+ LLASG KG+R AL
Sbjct: 79 PDKDISLYINSPGGSVSAGMAIYDTMQFIKPDVSTLCMGLAASMGAFLLASGAKGKRFAL 138
Query: 147 PNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFM 206
PNS +MIHQP GG GQA D+ I ++I+ + + LN L +HTGQ +E I ++ DRD FM
Sbjct: 139 PNSRVMIHQPLGGARGQASDIEIQAREILYLKERLNHLLAQHTGQDVERIARDTDRDNFM 198
Query: 207 TPEEAKEFGIIDEVIDQRP 225
+ E+AK +G+ID+V+ +RP
Sbjct: 199 SSEDAKAYGLIDQVLLKRP 217
>gi|255944899|ref|XP_002563217.1| Pc20g06920 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211587952|emb|CAP86021.1| Pc20g06920 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 258
Score = 254 bits (650), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 126/226 (55%), Positives = 162/226 (71%), Gaps = 12/226 (5%)
Query: 23 PSAQISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFL 82
PS RS++ P V E YDIFSRL+KERIIC+NG ++D + +VAQLLFL
Sbjct: 37 PSLAQPPRSWTPTPFVTETVGGSWHTYDIFSRLMKERIICLNGQVDDTLSASIVAQLLFL 96
Query: 83 ESENPSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGE 142
E++NPSKPIH+Y+NSPGG VTAGLAIYDTM YI SP++TIC+GQAASMGSLLLA G G+
Sbjct: 97 EADNPSKPIHLYINSPGGSVTAGLAIYDTMTYIASPVSTICVGQAASMGSLLLAGGEAGK 156
Query: 143 RRALPNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQ----SIEVIQK 198
R LP+S+IM+HQPSGGY GQA D+ IH K+I+RV LN +Y +H S++ I+K
Sbjct: 157 RYCLPHSSIMVHQPSGGYFGQASDIAIHAKEILRVRTQLNEIYQRHLTSKKKLSLDEIEK 216
Query: 199 NMDRDYFMTPEEAKEFGIIDEVIDQRPMALVTDAVGREGKEGKEGK 244
M+RDYFM +EA E G++DE++D+R G+EG G+E K
Sbjct: 217 LMERDYFMGAKEALELGVVDEILDRR-------VQGKEGT-GEESK 254
>gi|388566136|ref|ZP_10152607.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Hydrogenophaga sp. PBC]
gi|388266642|gb|EIK92161.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Hydrogenophaga sp. PBC]
Length = 205
Score = 254 bits (650), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 109/198 (55%), Positives = 158/198 (79%)
Query: 30 RSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSK 89
+ ++PMVIE S RGERAYDI+SRLLKER++ + GP+ND +A+++VAQLLFLESENP K
Sbjct: 7 QGLGMVPMVIEQSGRGERAYDIYSRLLKERVVFLVGPVNDQSANLIVAQLLFLESENPDK 66
Query: 90 PIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNS 149
I Y+NSPGG V+AG+AI+DTM +I+ ++T+C+G AASMG+ LLA+GTKG+R +LPNS
Sbjct: 67 DISFYINSPGGSVSAGMAIFDTMNFIKPDVSTLCVGMAASMGAFLLAAGTKGKRFSLPNS 126
Query: 150 TIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPE 209
+MIHQP GG GQA ++ IH ++I++ + LN + + TGQ +E I+++ +RDY+++
Sbjct: 127 KVMIHQPLGGTQGQATEIEIHAREILKTREQLNKILAERTGQPLEKIERDTERDYYLSAA 186
Query: 210 EAKEFGIIDEVIDQRPMA 227
E+ E+G+ID+VID+RP A
Sbjct: 187 ESAEYGLIDKVIDKRPSA 204
>gi|357059570|ref|ZP_09120412.1| ATP-dependent Clp protease proteolytic subunit [Selenomonas infelix
ATCC 43532]
gi|355371647|gb|EHG18991.1| ATP-dependent Clp protease proteolytic subunit [Selenomonas infelix
ATCC 43532]
Length = 203
Score = 254 bits (650), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 122/200 (61%), Positives = 156/200 (78%), Gaps = 1/200 (0%)
Query: 35 IPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHMY 94
+PMV+E+SSRGERAYDI+SRLLKERII + GPI+D A+VVVAQLLFLESE+P K IH+Y
Sbjct: 5 VPMVVENSSRGERAYDIYSRLLKERIIFLGGPIDDSVANVVVAQLLFLESEDPDKDIHLY 64
Query: 95 LNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMIH 154
+NSPGG VTAGLAIYDTMQYI+ ++TIC+GQAASMGS+LL +G G+R ALP++ IMIH
Sbjct: 65 INSPGGVVTAGLAIYDTMQYIKPDVSTICIGQAASMGSILLTAGAAGKRYALPHARIMIH 124
Query: 155 QPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKEF 214
QP GG GQ+ D+ I K+I+R+ + N + HTGQ E I + +RD FM+ EEA+ +
Sbjct: 125 QPLGGAQGQSTDIQIQAKEILRLREVGNNILAHHTGQDPEKINVDTERDNFMSAEEARAY 184
Query: 215 GIIDEVIDQRPMALVTDAVG 234
G+IDEV+ RP A T+ G
Sbjct: 185 GLIDEVV-TRPKAASTENKG 203
>gi|329120061|ref|ZP_08248731.1| ATP-dependent Clp protease, protease subunit [Neisseria
bacilliformis ATCC BAA-1200]
gi|327463592|gb|EGF09910.1| ATP-dependent Clp protease, protease subunit [Neisseria
bacilliformis ATCC BAA-1200]
Length = 211
Score = 254 bits (650), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 116/194 (59%), Positives = 155/194 (79%), Gaps = 2/194 (1%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+LIP VIE S RGERA+DI+SRLLKERII + GP+ND TA++VVAQ+LFLESENP K I
Sbjct: 9 TLIPTVIEQSGRGERAFDIYSRLLKERIIFLIGPVNDHTANLVVAQMLFLESENPDKDIF 68
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
Y+NSPGG VTAG++++DTM +I+ ++T+CLGQAASMG+ LL++G KG+R ALP+S +M
Sbjct: 69 FYINSPGGSVTAGMSVFDTMNFIKPDVSTLCLGQAASMGAFLLSAGAKGKRFALPHSRVM 128
Query: 153 IHQP--SGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEE 210
IHQP SGG GQA D+ IH ++++++ LN L KHTGQ IE I+++ DRD FM+ +
Sbjct: 129 IHQPLISGGLGGQASDIEIHARELIKLKQTLNELLAKHTGQPIEKIERDTDRDNFMSAQA 188
Query: 211 AKEFGIIDEVIDQR 224
AKE+G+ID+VI R
Sbjct: 189 AKEYGLIDQVIATR 202
>gi|268592036|ref|ZP_06126257.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Providencia
rettgeri DSM 1131]
gi|422010033|ref|ZP_16357015.1| ATP-dependent Clp protease proteolytic subunit [Providencia
rettgeri Dmel1]
gi|291312428|gb|EFE52881.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Providencia
rettgeri DSM 1131]
gi|414092206|gb|EKT53885.1| ATP-dependent Clp protease proteolytic subunit [Providencia
rettgeri Dmel1]
Length = 206
Score = 254 bits (650), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 111/196 (56%), Positives = 154/196 (78%)
Query: 29 ARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPS 88
A +L+PMVIE +SRGER+YDI+SRLLKERII + G + D A+++VAQ+LFLE+ENP
Sbjct: 11 ASQMALVPMVIEQTSRGERSYDIYSRLLKERIIFLTGQVEDHMANLIVAQMLFLEAENPE 70
Query: 89 KPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPN 148
K IH+Y+NSPGG +TAG++IYDTMQ+I+ ++TIC+GQA SMG+ LL +GTKG+R LPN
Sbjct: 71 KDIHLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQACSMGAFLLTAGTKGKRFCLPN 130
Query: 149 STIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTP 208
S +MIHQP GGY GQA D+ IH ++I++V +N L HTG+SIE I ++ +RD F++
Sbjct: 131 SRVMIHQPLGGYQGQASDIEIHAQEILKVKSRMNELMALHTGKSIEEITRDTERDRFLSA 190
Query: 209 EEAKEFGIIDEVIDQR 224
EAKE+G++D++ R
Sbjct: 191 NEAKEYGLVDQIYSSR 206
>gi|351729533|ref|ZP_08947224.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Acidovorax
radicis N35]
Length = 202
Score = 254 bits (650), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 110/195 (56%), Positives = 155/195 (79%)
Query: 30 RSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSK 89
+ ++PMVIE S RGER+YDI+SRLLKER+I + GP+ND TA++VVAQLLFLESENP K
Sbjct: 7 QGLGMVPMVIEQSGRGERSYDIYSRLLKERVIFLVGPVNDQTANLVVAQLLFLESENPDK 66
Query: 90 PIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNS 149
I Y+NSPGG V+AG+AI+DTM +I+ ++T+C G AASMG+ LLA+G KG+R ALPNS
Sbjct: 67 DISFYINSPGGSVSAGMAIFDTMNFIKPDVSTLCTGMAASMGAFLLAAGAKGKRFALPNS 126
Query: 150 TIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPE 209
+MIHQP GG GQA ++ IH ++I++ + LN + + TGQ +E IQ++ +RDYF++ +
Sbjct: 127 KVMIHQPLGGMQGQATEIEIHAREILKTREQLNKILAERTGQPLEKIQRDTERDYFLSAD 186
Query: 210 EAKEFGIIDEVIDQR 224
E+KE+G++D+VI +R
Sbjct: 187 ESKEYGLVDQVISKR 201
>gi|337279216|ref|YP_004618688.1| ATP-dependent Clp protease proteolytic subunit [Ramlibacter
tataouinensis TTB310]
gi|334730293|gb|AEG92669.1| candidate ATP-dependent Clp protease proteolytic subunit
(Endopeptidase Clp) [Ramlibacter tataouinensis TTB310]
Length = 202
Score = 254 bits (650), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 109/199 (54%), Positives = 157/199 (78%)
Query: 27 ISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESEN 86
+ ++ ++P+VIE S RGER+YDI+SRLL+ER++ + GP+ND TA++VVAQLLFLESEN
Sbjct: 4 LDTQALGMVPIVIEQSGRGERSYDIYSRLLRERVVFLVGPVNDQTANLVVAQLLFLESEN 63
Query: 87 PSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRAL 146
P K I Y+NSPGG V+AG+AI+DTM +I+ ++T+C G AASMG+ LLA+GTKG+R AL
Sbjct: 64 PDKDISFYINSPGGSVSAGMAIFDTMNFIKPDVSTLCTGMAASMGAFLLAAGTKGKRFAL 123
Query: 147 PNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFM 206
PNS +MIHQP GG GQA D+ IH K I++ LN + + TGQ +E I+++ +RDYF+
Sbjct: 124 PNSKVMIHQPLGGMQGQATDIEIHAKDILKTRAQLNKILAERTGQPLEKIERDTERDYFL 183
Query: 207 TPEEAKEFGIIDEVIDQRP 225
+ +E+K++G++D+VI +RP
Sbjct: 184 SADESKDYGLVDQVIAKRP 202
>gi|424880485|ref|ZP_18304117.1| protease subunit of ATP-dependent protease [Rhizobium leguminosarum
bv. trifolii WU95]
gi|392516848|gb|EIW41580.1| protease subunit of ATP-dependent protease [Rhizobium leguminosarum
bv. trifolii WU95]
Length = 203
Score = 254 bits (650), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 112/194 (57%), Positives = 153/194 (78%)
Query: 31 SFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKP 90
+ L+PMVIE SSRGER++DI+SRLL+ERII +NG +ND + +V AQLLFLE+ENP KP
Sbjct: 4 AMQLVPMVIEQSSRGERSFDIYSRLLRERIIFLNGEVNDSVSALVCAQLLFLEAENPKKP 63
Query: 91 IHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNST 150
I++Y+NSPGG VT+GLA+YDTM++IR+P++T+C+G A SMGS LL +G G R ALPN++
Sbjct: 64 INLYINSPGGVVTSGLAMYDTMRFIRAPVHTLCMGTARSMGSFLLMAGEAGGRAALPNAS 123
Query: 151 IMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEE 210
I+IHQPSGG+ GQA DM IH ++I++ + LY +H G+S E ++ MDRD FMT EE
Sbjct: 124 ILIHQPSGGFQGQASDMMIHAEEILKTKQRMTRLYAEHCGRSYEDFERGMDRDRFMTAEE 183
Query: 211 AKEFGIIDEVIDQR 224
A E+G+ID ++ R
Sbjct: 184 ALEWGLIDRILTVR 197
>gi|241764198|ref|ZP_04762232.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Acidovorax
delafieldii 2AN]
gi|241366475|gb|EER60979.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Acidovorax
delafieldii 2AN]
Length = 202
Score = 254 bits (650), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 113/199 (56%), Positives = 155/199 (77%)
Query: 27 ISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESEN 86
+ + ++PMVIE S RGER+YDI+SRLLKER+I + G +ND TA++VVAQLLFLESEN
Sbjct: 4 LETQGLGMVPMVIEQSGRGERSYDIYSRLLKERVIFLVGEVNDQTANLVVAQLLFLESEN 63
Query: 87 PSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRAL 146
P K I Y+NSPGG VTAG++IYDTMQ+I+ ++T+C+G AASMG+ LLA+G KG+R +L
Sbjct: 64 PDKDISFYINSPGGSVTAGMSIYDTMQFIKPDVSTLCVGFAASMGAFLLAAGAKGKRFSL 123
Query: 147 PNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFM 206
PNS +MIHQ GG GQA D+ IH + I+R D +N + + TGQ +E ++ + +RDYF+
Sbjct: 124 PNSKVMIHQVLGGARGQATDIEIHARDILRTKDQMNRILAERTGQPLEKVKADTERDYFL 183
Query: 207 TPEEAKEFGIIDEVIDQRP 225
T +EAK++GIID+VI +RP
Sbjct: 184 TADEAKDYGIIDQVIHKRP 202
>gi|242206306|ref|XP_002469009.1| predicted protein [Postia placenta Mad-698-R]
gi|220731874|gb|EED85714.1| predicted protein [Postia placenta Mad-698-R]
Length = 200
Score = 254 bits (650), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 120/196 (61%), Positives = 152/196 (77%), Gaps = 9/196 (4%)
Query: 37 MVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHMYLN 96
MVIE + RGER+YDIFSRLL+ER+I + GPI D + + VAQLLFLE+E SKPIH+Y+N
Sbjct: 1 MVIEQTGRGERSYDIFSRLLRERVIMLYGPIRDTDSALTVAQLLFLEAEETSKPIHLYIN 60
Query: 97 SPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMIHQP 156
SPGG VTAGLAIYDT Y+ SPI+T C+GQA SMGSLLLA+G KG+R ALP+STIMIHQP
Sbjct: 61 SPGGSVTAGLAIYDT--YVSSPIHTYCVGQACSMGSLLLAAGEKGKRHALPHSTIMIHQP 118
Query: 157 SGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKN-------MDRDYFMTPE 209
SGG SGQA D+ IH K+I+RV L +Y +H G+ E ++ ++RDYFMT +
Sbjct: 119 SGGASGQASDIVIHAKEILRVRQLLTGIYQRHCGKDGESVEAGVQRFETALERDYFMTAQ 178
Query: 210 EAKEFGIIDEVIDQRP 225
EA+EFGI+D V+++RP
Sbjct: 179 EAREFGIVDSVLEKRP 194
>gi|219113871|ref|XP_002186519.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|209583369|gb|ACI65989.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 223
Score = 254 bits (650), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 114/190 (60%), Positives = 152/190 (80%)
Query: 35 IPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHMY 94
+P+V+E + GER++DI+SRLL+ERIIC++G ++D A +V AQLLFLE+E+P KP++MY
Sbjct: 19 VPIVLESGALGERSFDIYSRLLRERIICVHGEVSDHMASLVTAQLLFLEAEHPEKPVYMY 78
Query: 95 LNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMIH 154
+NSPGG VTAG+A+YDTMQYIR ++TIC+GQAASMGSLLLA GT G R ALPNS IM+H
Sbjct: 79 INSPGGLVTAGMAMYDTMQYIRPDVHTICMGQAASMGSLLLAGGTPGCRFALPNSRIMLH 138
Query: 155 QPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKEF 214
QPSGG G A D+ I ++I+R LN LY HTGQ + I++ MDRDYF+ +AK+F
Sbjct: 139 QPSGGAQGMAADIDIQAREILRTRANLNRLYVHHTGQELSEIERVMDRDYFLDVHQAKKF 198
Query: 215 GIIDEVIDQR 224
G+ID+V+D+R
Sbjct: 199 GVIDQVLDKR 208
>gi|289207758|ref|YP_003459824.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Thioalkalivibrio sp. K90mix]
gi|288943389|gb|ADC71088.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thioalkalivibrio sp. K90mix]
Length = 224
Score = 254 bits (650), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 114/206 (55%), Positives = 161/206 (78%), Gaps = 2/206 (0%)
Query: 29 ARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPS 88
A+ +L+PMV+E ++RGERAYDI+SRLLK+R+I GP+ D A+V+VAQLLFLESENP
Sbjct: 13 AQGLNLVPMVVEQTARGERAYDIYSRLLKDRVIFCVGPVEDYMANVIVAQLLFLESENPD 72
Query: 89 KPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPN 148
K I +Y+NSPGG VTAG+AIYDTMQ+I+ ++T+C+GQAASMG++LLA G G+R +LP+
Sbjct: 73 KEISLYINSPGGAVTAGMAIYDTMQFIKPQVSTLCVGQAASMGAVLLAGGAPGKRYSLPH 132
Query: 149 STIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTP 208
S +MIHQP GG+ GQA D+ IH ++I+++ + LN + HTGQ++E ++++ DRD FMT
Sbjct: 133 SRVMIHQPLGGFQGQASDIDIHAREILKIREELNRVLAHHTGQTVEQVEQDTDRDRFMTA 192
Query: 209 EEAKEFGIIDEVIDQR--PMALVTDA 232
EAK++G++D V+ R P A DA
Sbjct: 193 VEAKDYGLVDNVLSSRGAPAAGDKDA 218
>gi|333908458|ref|YP_004482044.1| ATP-dependent Clp protease proteolytic subunit [Marinomonas
posidonica IVIA-Po-181]
gi|333478464|gb|AEF55125.1| ATP-dependent Clp protease proteolytic subunit [Marinomonas
posidonica IVIA-Po-181]
Length = 210
Score = 254 bits (650), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 114/208 (54%), Positives = 161/208 (77%), Gaps = 1/208 (0%)
Query: 18 LQLSKPS-AQISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVV 76
+ L+ P+ ++ S L+PMVIE ++RGER++DI+SRLLKER+I + G + D A++VV
Sbjct: 1 MNLTNPTTGPVAITSNGLVPMVIEQTARGERSFDIYSRLLKERVIFLVGQVEDHMANLVV 60
Query: 77 AQLLFLESENPSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLA 136
AQLLFLESENP K IH+Y+NSPGG VTAG++IYDTMQ+I+ ++T+C+GQAASMG+LLL
Sbjct: 61 AQLLFLESENPDKDIHLYINSPGGSVTAGMSIYDTMQFIKPDVSTMCIGQAASMGALLLT 120
Query: 137 SGTKGERRALPNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVI 196
+G G+R LPNS +MIHQP GGY GQA D+ IHT++I+ + + LN + HTG+ I+ +
Sbjct: 121 AGAAGKRYCLPNSRVMIHQPLGGYQGQASDIEIHTREILSIKNKLNEIISFHTGKPIDQV 180
Query: 197 QKNMDRDYFMTPEEAKEFGIIDEVIDQR 224
+ DRD FM PE AKE+G+ID+++ +R
Sbjct: 181 AVDTDRDNFMNPETAKEYGLIDDILQKR 208
>gi|350552166|ref|ZP_08921372.1| ATP-dependent Clp protease proteolytic subunit [Thiorhodospira
sibirica ATCC 700588]
gi|349795031|gb|EGZ48837.1| ATP-dependent Clp protease proteolytic subunit [Thiorhodospira
sibirica ATCC 700588]
Length = 214
Score = 254 bits (650), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 109/198 (55%), Positives = 159/198 (80%)
Query: 27 ISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESEN 86
++ ++ +L+PMV+E ++RGERAYDI+SRLLKER++ GP+ D A+++VAQLLFLESEN
Sbjct: 9 LATQALNLVPMVVEQTARGERAYDIYSRLLKERVVFAVGPVEDHMANLIVAQLLFLESEN 68
Query: 87 PSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRAL 146
P K I +Y+NSPGG VTAGLAIYDTMQ+I+ ++T+C+GQAASMG++LL+ G KG+R L
Sbjct: 69 PDKDISLYINSPGGAVTAGLAIYDTMQFIKPDVSTLCIGQAASMGAVLLSGGAKGKRYCL 128
Query: 147 PNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFM 206
+S +MIHQP GG+ GQA D+ IH ++I+++ LN + KH+GQSIE I+ + DRD FM
Sbjct: 129 AHSRVMIHQPLGGFQGQASDIDIHAREILKIRAQLNEILAKHSGQSIERIENDTDRDRFM 188
Query: 207 TPEEAKEFGIIDEVIDQR 224
+P++A ++G+ID+++ R
Sbjct: 189 SPQDALDYGLIDQILTSR 206
>gi|323140768|ref|ZP_08075687.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Phascolarctobacterium succinatutens YIT 12067]
gi|322414786|gb|EFY05586.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Phascolarctobacterium succinatutens YIT 12067]
Length = 197
Score = 254 bits (650), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 110/190 (57%), Positives = 156/190 (82%)
Query: 32 FSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPI 91
+ +P+V+E SSRGER+YDI+SRLLK+RI+ + GPI+D+ A+VV+AQLLFLESE+P K I
Sbjct: 1 MNYVPIVVEQSSRGERSYDIYSRLLKDRIVFVTGPIDDNMANVVIAQLLFLESEDPDKDI 60
Query: 92 HMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTI 151
H+Y+NSPGG V+AG+AIYDTMQYI+ ++TIC+G AASM S+LLA+G G+R ALP S +
Sbjct: 61 HLYINSPGGSVSAGMAIYDTMQYIKPDVSTICMGMAASMASVLLAAGAPGKRFALPYSRV 120
Query: 152 MIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEA 211
MIHQP GG GQA ++ IH ++I+R+ + +N + KHTGQ++E I + +RD+++T +EA
Sbjct: 121 MIHQPLGGAQGQATEIEIHAREILRIREEMNQVLAKHTGQTVEKIAADTERDHYLTSKEA 180
Query: 212 KEFGIIDEVI 221
KE+G+IDEV+
Sbjct: 181 KEYGLIDEVV 190
>gi|398347022|ref|ZP_10531725.1| ATP-dependent Clp protease proteolytic subunit [Leptospira broomii
str. 5399]
Length = 198
Score = 254 bits (650), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 112/190 (58%), Positives = 157/190 (82%)
Query: 32 FSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPI 91
S+IP+VIE + RGER+YDI+SRLLK+RII + I+D+ A+VV+AQLLFL++ENP + I
Sbjct: 1 MSVIPVVIEQTGRGERSYDIYSRLLKDRIIFLGNAISDEYANVVIAQLLFLDAENPDRDI 60
Query: 92 HMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTI 151
++Y+NSPGG V++GLAIYDTMQYI++ + T+C+GQA+SM +LLLA G KG+R ALP+S I
Sbjct: 61 YLYINSPGGYVSSGLAIYDTMQYIKADVRTLCVGQASSMAALLLAGGAKGKRSALPHSRI 120
Query: 152 MIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEA 211
M+HQP+GG +GQA D+ I K+++++ + LN LY KHTG+S+E IQK+ +RD +MT EEA
Sbjct: 121 MMHQPTGGATGQASDIAIQAKEVLKLKEVLNGLYTKHTGKSMEQIQKDTERDLYMTAEEA 180
Query: 212 KEFGIIDEVI 221
+ +GIID VI
Sbjct: 181 QTYGIIDSVI 190
>gi|357040211|ref|ZP_09102000.1| ATP-dependent Clp protease proteolytic subunit [Desulfotomaculum
gibsoniae DSM 7213]
gi|355356875|gb|EHG04656.1| ATP-dependent Clp protease proteolytic subunit [Desulfotomaculum
gibsoniae DSM 7213]
Length = 197
Score = 254 bits (650), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 113/188 (60%), Positives = 154/188 (81%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
L+P+V+E ++RGER+YDI+SRLLK+RI+ I GPI+D +++V+AQLLFLE+E+P K I++
Sbjct: 4 LVPIVVEQTNRGERSYDIYSRLLKDRIVFIGGPIDDTVSNLVIAQLLFLEAEDPEKDINI 63
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VTAG+AIYDTMQY++ ++TICLGQAASMGS LLA+G G+R ALP + IMI
Sbjct: 64 YINSPGGVVTAGMAIYDTMQYVKPDVSTICLGQAASMGSFLLAAGAPGKRFALPYARIMI 123
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQP GG GQA D+ IH K+I+R+ D LN L KHTGQ + + ++ +RD+FM+ EEAKE
Sbjct: 124 HQPLGGVQGQATDIDIHAKEILRMKDTLNDLLAKHTGQPRDKVARDTERDFFMSAEEAKE 183
Query: 214 FGIIDEVI 221
+G+ID+V
Sbjct: 184 YGLIDKVF 191
>gi|299755201|ref|XP_001828495.2| ATP-dependent Clp protease proteolytic subunit [Coprinopsis cinerea
okayama7#130]
gi|298411115|gb|EAU93328.2| ATP-dependent Clp protease proteolytic subunit [Coprinopsis cinerea
okayama7#130]
Length = 254
Score = 254 bits (649), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 117/200 (58%), Positives = 155/200 (77%), Gaps = 7/200 (3%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMVIE + RGER+YDIFSRLL+ER+I ++GPI D + +VVAQLLFLE+E+ +KPIH
Sbjct: 45 NLVPMVIEQTGRGERSYDIFSRLLRERVIMLHGPIRDTDSTLVVAQLLFLEAEDSTKPIH 104
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
+Y+NSPGG VTAGLAIYDTMQY+ +PI+T LG AASMGSLLLA+G KG R LPN++IM
Sbjct: 105 LYINSPGGSVTAGLAIYDTMQYVSAPIHTYGLGLAASMGSLLLAAGAKGRRHCLPNASIM 164
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEV-------IQKNMDRDYF 205
IHQPSGG SGQA D+ IH K+I+R+ L +Y +H + E + ++RDY+
Sbjct: 165 IHQPSGGASGQATDIAIHAKEILRIRQLLTGIYQRHCAKEGETEAAGLKRFETALERDYY 224
Query: 206 MTPEEAKEFGIIDEVIDQRP 225
MT +EA EFGI+D ++++RP
Sbjct: 225 MTAQEALEFGIVDGILEKRP 244
>gi|221215056|ref|ZP_03588023.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
multivorans CGD1]
gi|421469009|ref|ZP_15917506.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Burkholderia multivorans ATCC BAA-247]
gi|421479611|ref|ZP_15927294.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Burkholderia multivorans CF2]
gi|221164992|gb|EED97471.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
multivorans CGD1]
gi|400222687|gb|EJO53050.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Burkholderia multivorans CF2]
gi|400230734|gb|EJO60485.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Burkholderia multivorans ATCC BAA-247]
Length = 208
Score = 254 bits (649), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 114/199 (57%), Positives = 157/199 (78%)
Query: 27 ISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESEN 86
A++ L+P+V+E S RGER+YDI+SRLLKER++ + G +ND TA++VVAQLLFLESEN
Sbjct: 10 FEAQALGLVPIVVETSGRGERSYDIYSRLLKERLVFMVGEVNDQTANLVVAQLLFLESEN 69
Query: 87 PSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRAL 146
P K I +Y+NSPGG V+AG+AIYDTMQ+I+ ++T+C+G AASMG+ LLASG KG+R AL
Sbjct: 70 PDKDISLYINSPGGSVSAGMAIYDTMQFIKPDVSTLCMGLAASMGAFLLASGAKGKRFAL 129
Query: 147 PNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFM 206
PNS +MIHQP GG GQA D+ I ++I+ + + LN L +HTGQ +E I ++ DRD FM
Sbjct: 130 PNSRVMIHQPLGGARGQASDIEIQAREILYLKERLNHLLAQHTGQDVERIARDTDRDNFM 189
Query: 207 TPEEAKEFGIIDEVIDQRP 225
+ E+AK +G+ID+V+ +RP
Sbjct: 190 SSEDAKAYGLIDQVLLKRP 208
>gi|344199551|ref|YP_004783877.1| ATP-dependent Clp protease proteolytic subunit [Acidithiobacillus
ferrivorans SS3]
gi|343774995|gb|AEM47551.1| ATP-dependent Clp protease proteolytic subunit [Acidithiobacillus
ferrivorans SS3]
Length = 214
Score = 254 bits (649), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 111/197 (56%), Positives = 157/197 (79%)
Query: 28 SARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENP 87
+ + +P+V+E + RGER+YDI+SRLLKER+I + G + D A++VVAQLLFLE+ENP
Sbjct: 12 AVQGLGYVPIVVEQTGRGERSYDIYSRLLKERVIFMVGQVEDMMANLVVAQLLFLEAENP 71
Query: 88 SKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALP 147
K I +Y+NSPGG VTAG+AIYDTMQ++R ++T+C+GQAASMG++LLA+G +G+R ALP
Sbjct: 72 DKDIALYINSPGGSVTAGMAIYDTMQFVRPKVSTVCIGQAASMGAVLLAAGAEGKRYALP 131
Query: 148 NSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMT 207
N+ IM+HQPSGG+ GQA D+ IHTK+I+R+ + LN + HTGQ E I++++DRD+FM+
Sbjct: 132 NARIMLHQPSGGFQGQAHDIEIHTKEILRIRERLNDILVHHTGQDRERIEQDLDRDFFMS 191
Query: 208 PEEAKEFGIIDEVIDQR 224
EEAK + ++D VI R
Sbjct: 192 AEEAKTYHLVDAVISHR 208
>gi|300715591|ref|YP_003740394.1| ATP-dependent Clp protease proteolytic subunit [Erwinia billingiae
Eb661]
gi|299061427|emb|CAX58539.1| ATP-dependent Clp protease proteolytic subunit [Erwinia billingiae
Eb661]
Length = 215
Score = 254 bits (649), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 109/197 (55%), Positives = 157/197 (79%)
Query: 28 SARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENP 87
+A +L+PMV+E +SRGER+YDIFSRLLKERII + G + D A+++VAQ+LFLE+ENP
Sbjct: 18 TAPHMALVPMVVEQTSRGERSYDIFSRLLKERIIFLTGQVEDHMANLIVAQMLFLEAENP 77
Query: 88 SKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALP 147
K IH+Y+NSPGG +TAG++IYDTM++I+ ++TIC+GQA SMG+ LL +GTKG+R ALP
Sbjct: 78 EKDIHLYINSPGGVITAGMSIYDTMKFIKPDVSTICMGQACSMGAFLLTAGTKGKRYALP 137
Query: 148 NSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMT 207
NS +MIHQP GGY GQA D+ IH ++I++V +N L +HTG+++E I+++ +RD F++
Sbjct: 138 NSRVMIHQPLGGYQGQATDIEIHAREILKVKARMNELMAEHTGKTLEEIERDTERDRFLS 197
Query: 208 PEEAKEFGIIDEVIDQR 224
EA E+G++D V+ R
Sbjct: 198 ASEAVEYGLVDSVLTHR 214
>gi|315499702|ref|YP_004088505.1| endopeptidase clp [Asticcacaulis excentricus CB 48]
gi|315417714|gb|ADU14354.1| Endopeptidase Clp [Asticcacaulis excentricus CB 48]
Length = 209
Score = 254 bits (649), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 118/191 (61%), Positives = 145/191 (75%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
LIP VIE SSRGERAYDI+SR+LKERII + GP D A + AQLLFLESENP K I M
Sbjct: 12 LIPTVIEQSSRGERAYDIYSRMLKERIIFLTGPFEDGMATSICAQLLFLESENPKKEISM 71
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGGQVT+ LAIYDTMQYI+SP+ T+C+G AAS GSL+L +G G+R +LPNS IM+
Sbjct: 72 YINSPGGQVTSALAIYDTMQYIKSPVTTVCMGMAASAGSLILQAGEAGQRISLPNSKIMV 131
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQPSGG G A D+ I + I + LN +Y KHTGQ +VI++ +DRD +MT EAKE
Sbjct: 132 HQPSGGARGMASDIEIQAEDIRKTKKLLNEIYVKHTGQPYDVIERTLDRDRYMTAAEAKE 191
Query: 214 FGIIDEVIDQR 224
FG+ID V ++R
Sbjct: 192 FGLIDHVYEKR 202
>gi|407716203|ref|YP_006837483.1| ATP-dependent Clp protease proteolytic subunit [Cycloclasticus sp.
P1]
gi|407256539|gb|AFT66980.1| ATP-dependent Clp protease proteolytic subunit [Cycloclasticus sp.
P1]
Length = 206
Score = 254 bits (649), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 111/199 (55%), Positives = 158/199 (79%)
Query: 26 QISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESE 85
++ A++ L+PMV+E ++RGER+YDI+SRLLKER+I + G + D A+++VAQ+LFLESE
Sbjct: 4 KLEAQALGLVPMVVEQTARGERSYDIYSRLLKERVIFLVGQVEDHMANLIVAQMLFLESE 63
Query: 86 NPSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRA 145
NP K IH+Y+NSPGG VTAG++IYDTMQ+I+ ++T+C+GQAASMG+LLL G +G+R A
Sbjct: 64 NPDKDIHLYINSPGGSVTAGMSIYDTMQFIKPDVSTMCIGQAASMGALLLTGGAEGKRFA 123
Query: 146 LPNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYF 205
LP+S +MIHQP GG+ GQA D+ IH K+I+ + D LN + HTGQ ++VIQ + DRD F
Sbjct: 124 LPHSRMMIHQPLGGFQGQASDIDIHAKEILLIRDRLNKIMASHTGQPLDVIQGDTDRDNF 183
Query: 206 MTPEEAKEFGIIDEVIDQR 224
M ++A E+G+ID+V+ R
Sbjct: 184 MGSQQAVEYGLIDQVLKTR 202
>gi|417839806|ref|ZP_12485973.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
haemolyticus M19107]
gi|341951681|gb|EGT78241.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
haemolyticus M19107]
Length = 193
Score = 254 bits (649), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 114/192 (59%), Positives = 155/192 (80%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
S+IPMV+E +SRGER+YDI+SRLLKER+I ++G + D A+++VAQLLFLESE+ +K I+
Sbjct: 2 SVIPMVVEQTSRGERSYDIYSRLLKERVIFLSGEVEDRMANLIVAQLLFLESEDATKDIN 61
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
+Y+NSPGG VTAG+AIYDTMQ+I+ I T+C+GQA SMG+ LLA GT G+R ALPN+ +M
Sbjct: 62 IYINSPGGSVTAGMAIYDTMQFIKPDIRTLCIGQACSMGAFLLAGGTAGKRAALPNARVM 121
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQP GG+ GQA D+ IH ++I+++ LN HTGQSIE I+K+ DRD FM+ EEAK
Sbjct: 122 IHQPLGGFRGQASDIQIHAQEILKIKHTLNDRLAFHTGQSIERIEKDTDRDNFMSAEEAK 181
Query: 213 EFGIIDEVIDQR 224
+G++DEV+ +R
Sbjct: 182 AYGLVDEVLIKR 193
>gi|171463607|ref|YP_001797720.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Polynucleobacter necessarius subsp. necessarius STIR1]
gi|171193145|gb|ACB44106.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Polynucleobacter necessarius subsp. necessarius STIR1]
Length = 209
Score = 254 bits (649), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 115/202 (56%), Positives = 156/202 (77%)
Query: 24 SAQISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLE 83
S + + L+PMVIE S RGERAYDI+SRLL+ER+I + G +ND TA++V+AQLLFLE
Sbjct: 8 SENLEPKGLGLVPMVIETSGRGERAYDIYSRLLRERVIFLVGEVNDQTANLVIAQLLFLE 67
Query: 84 SENPSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGER 143
SENP K I +Y+NSPGG V+AGLAIYDTMQ+I+ ++T+C+G AASMG+ LL +G G+R
Sbjct: 68 SENPDKEISLYINSPGGAVSAGLAIYDTMQFIKPHVSTLCMGMAASMGAFLLCAGENGKR 127
Query: 144 RALPNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRD 203
ALPNS +MIHQP GG GQA D+ I ++I+ + + LN + TGQSIE I K+ DRD
Sbjct: 128 YALPNSRVMIHQPLGGARGQASDIEIQAREILYLRERLNKILADRTGQSIETIAKDTDRD 187
Query: 204 YFMTPEEAKEFGIIDEVIDQRP 225
FM+ E+A+++G+ID+VI++RP
Sbjct: 188 NFMSAEQARDYGLIDKVIEKRP 209
>gi|401565794|ref|ZP_10806612.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Selenomonas sp. FOBRC6]
gi|400185000|gb|EJO19235.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Selenomonas sp. FOBRC6]
Length = 203
Score = 254 bits (649), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 120/191 (62%), Positives = 153/191 (80%), Gaps = 1/191 (0%)
Query: 35 IPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHMY 94
+PMV+E+SSRGERAYDI+SRLLKERII + GPI+D A+VVVAQLLFLESE+P K IH+Y
Sbjct: 5 VPMVVENSSRGERAYDIYSRLLKERIIFLGGPIDDSVANVVVAQLLFLESEDPDKDIHLY 64
Query: 95 LNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMIH 154
+NSPGG VTAGLAIYDTMQYI+ ++TIC+GQAASMGS+LL +G G+R ALP++ IMIH
Sbjct: 65 INSPGGVVTAGLAIYDTMQYIKPDVSTICIGQAASMGSILLTAGAAGKRYALPHARIMIH 124
Query: 155 QPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKEF 214
QP GG GQ+ D+ I K+I+R+ + N + +HTGQ E I + +RD FM+ EEAK +
Sbjct: 125 QPLGGAQGQSTDIQIQAKEILRLREVGNNILARHTGQDPEKINVDTERDNFMSAEEAKAY 184
Query: 215 GIIDEVIDQRP 225
G+IDEV+ RP
Sbjct: 185 GLIDEVV-TRP 194
>gi|168186116|ref|ZP_02620751.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
botulinum C str. Eklund]
gi|169296133|gb|EDS78266.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
botulinum C str. Eklund]
Length = 195
Score = 254 bits (649), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 113/192 (58%), Positives = 156/192 (81%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
SL+P+V+E ++RGER+YDI+SRLLK+RII + +ND +A +VVAQLLFLE+E+P K I+
Sbjct: 2 SLVPVVVEQTNRGERSYDIYSRLLKDRIIFLGEEVNDVSASLVVAQLLFLEAEDPDKDIY 61
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
+Y+NSPGG +TAG+AIYDTMQYI+ ++TIC+G AASMG+ LL +G KG+R ALPNS IM
Sbjct: 62 LYINSPGGSITAGMAIYDTMQYIKPDVSTICIGMAASMGAFLLTAGAKGKRFALPNSEIM 121
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQP GG+ GQA D+ IH +I+++ D LN + + TG+ +EVI+K+++RD FM EEAK
Sbjct: 122 IHQPLGGFQGQATDIGIHANRILKIKDKLNKILSERTGKPLEVIKKDVERDNFMEAEEAK 181
Query: 213 EFGIIDEVIDQR 224
E+G+ID+VI R
Sbjct: 182 EYGLIDDVITSR 193
>gi|410666834|ref|YP_006919205.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Thermacetogenium phaeum DSM 12270]
gi|409104581|gb|AFV10706.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Thermacetogenium phaeum DSM 12270]
Length = 201
Score = 254 bits (649), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 114/195 (58%), Positives = 155/195 (79%)
Query: 30 RSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSK 89
R+ L+P+V+E +SRGER+YDI+SRLLK+RII + PI+D A++++AQ+LFLE+E+P K
Sbjct: 3 RAQYLVPIVVEQTSRGERSYDIYSRLLKDRIIFLGTPIDDSVANIIIAQMLFLEAEDPEK 62
Query: 90 PIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNS 149
I++Y+NSPGG +TAGLAI+DTM+Y++ ++TIC+G AASMG+ LLA+G K +R A PNS
Sbjct: 63 DIYLYINSPGGSITAGLAIFDTMRYVKPDVSTICVGMAASMGAFLLAAGAKKKRFATPNS 122
Query: 150 TIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPE 209
IMIHQP GG GQA D+ IH ++IV+V D LN + + TGQS+E I ++ DRD FM E
Sbjct: 123 EIMIHQPMGGAQGQATDVEIHARRIVKVRDRLNRILAELTGQSVERISRDTDRDTFMDAE 182
Query: 210 EAKEFGIIDEVIDQR 224
EAKE+GIIDEVI R
Sbjct: 183 EAKEYGIIDEVITSR 197
>gi|121705182|ref|XP_001270854.1| Clp protease, putative [Aspergillus clavatus NRRL 1]
gi|119399000|gb|EAW09428.1| Clp protease, putative [Aspergillus clavatus NRRL 1]
Length = 256
Score = 254 bits (649), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 123/205 (60%), Positives = 154/205 (75%), Gaps = 4/205 (1%)
Query: 24 SAQISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLE 83
S+ I R ++ P V E G YDIFSRLLKERIIC+NG +++ + +VAQLLFLE
Sbjct: 35 SSAIPPRGWTPTPFVAETVGGGWHTYDIFSRLLKERIICLNGEVDESMSASIVAQLLFLE 94
Query: 84 SENPSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGER 143
++NP KPIH+Y+NSPGG VTAGLAIYDTM YI SP++TIC+GQAASMGSLLL G G+R
Sbjct: 95 ADNPQKPIHLYINSPGGSVTAGLAIYDTMTYITSPVSTICVGQAASMGSLLLCGGHPGKR 154
Query: 144 RALPNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKH-TGQ---SIEVIQKN 199
LP+S+IMIHQPSGGY GQA D+ IH K+I+RV LN +Y +H TG S+E I+K
Sbjct: 155 YCLPHSSIMIHQPSGGYFGQASDIAIHAKEILRVRSQLNKIYKRHLTGNKELSLEEIEKL 214
Query: 200 MDRDYFMTPEEAKEFGIIDEVIDQR 224
M+RDYFM EA E GI+DE++D+R
Sbjct: 215 MERDYFMGANEALEMGIVDEILDRR 239
>gi|335038541|ref|ZP_08531774.1| ATP-dependent Clp protease proteolytic subunit [Caldalkalibacillus
thermarum TA2.A1]
gi|334181561|gb|EGL84093.1| ATP-dependent Clp protease proteolytic subunit [Caldalkalibacillus
thermarum TA2.A1]
Length = 196
Score = 254 bits (649), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 116/192 (60%), Positives = 153/192 (79%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
LIP VIE ++RGERAYDI+SRLLK+RII + PI+D A+ VVAQLLFL +E+P K I +
Sbjct: 3 LIPTVIEQTNRGERAYDIYSRLLKDRIIFLGTPIDDQVANAVVAQLLFLAAEDPEKDISL 62
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG +TAG+AIYDTMQYI+ ++TIC+G AASMG+ LLA+G KG+R ALPNS +MI
Sbjct: 63 YINSPGGSITAGMAIYDTMQYIKPKVSTICIGLAASMGAFLLAAGEKGKRFALPNSEVMI 122
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQP GG GQA D+ IH K+I+++ D LN + + TGQ +E I+++ DRD+FM+ EEAK
Sbjct: 123 HQPLGGTQGQASDIEIHAKRILKMRDRLNKILAERTGQPLERIERDTDRDHFMSAEEAKA 182
Query: 214 FGIIDEVIDQRP 225
+G+IDEVI + P
Sbjct: 183 YGLIDEVITRTP 194
>gi|296136117|ref|YP_003643359.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thiomonas
intermedia K12]
gi|295796239|gb|ADG31029.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thiomonas
intermedia K12]
Length = 202
Score = 254 bits (649), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 114/195 (58%), Positives = 156/195 (80%)
Query: 30 RSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSK 89
++ L+PMVIE S RGERAYDI+SRLL+ER+I + GPIND A++VVAQLLFLESENP K
Sbjct: 7 QNLGLVPMVIEQSGRGERAYDIYSRLLRERVIFLVGPINDQMANLVVAQLLFLESENPDK 66
Query: 90 PIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNS 149
I +Y+NSPGG V+AG+AI+DTMQ+I+ ++T+C G AASMG+ L+A+G KG+R +LPNS
Sbjct: 67 DISLYINSPGGSVSAGMAIFDTMQFIKPDVSTLCTGIAASMGAFLMAAGAKGKRYSLPNS 126
Query: 150 TIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPE 209
IMIHQPSGG GQA D+ I ++I+ + + LN + + TGQ++E I + +RD+FM+ E
Sbjct: 127 RIMIHQPSGGAQGQATDIEIQAREILYLRERLNGILAERTGQTLEKIGIDTERDFFMSAE 186
Query: 210 EAKEFGIIDEVIDQR 224
EAK++G+IDEVI +R
Sbjct: 187 EAKDYGLIDEVISKR 201
>gi|452943368|ref|YP_007499533.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Hydrogenobaculum sp. HO]
gi|452881786|gb|AGG14490.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Hydrogenobaculum sp. HO]
Length = 205
Score = 254 bits (649), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 114/191 (59%), Positives = 154/191 (80%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
L+P+V+E + RGERAYDI+SRLL++RI+ + PI+D A+++VAQLLFLE+++P K I M
Sbjct: 14 LVPIVVEQTPRGERAYDIYSRLLQDRIVILGFPIDDHVANLIVAQLLFLEAQDPEKDIQM 73
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VTAGLAIYDTMQYI+ + TIC+GQAASMG++LLA+G KG+R ALPN+ IMI
Sbjct: 74 YINSPGGSVTAGLAIYDTMQYIKPDVTTICIGQAASMGAVLLAAGAKGKRFALPNARIMI 133
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQP GG GQA D+ IH ++I R+ LN + TG+S+ I+K++DRDYFM+ EEAK
Sbjct: 134 HQPLGGVQGQATDILIHAEEIKRIKHILNTILANATGKSLRQIEKDVDRDYFMSAEEAKN 193
Query: 214 FGIIDEVIDQR 224
+G+ID+VI +R
Sbjct: 194 YGLIDKVITKR 204
>gi|163751869|ref|ZP_02159083.1| ATP-dependent Clp protease proteolytic subunit [Shewanella benthica
KT99]
gi|161328219|gb|EDP99383.1| ATP-dependent Clp protease proteolytic subunit [Shewanella benthica
KT99]
Length = 203
Score = 254 bits (649), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 110/192 (57%), Positives = 155/192 (80%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E +++GER+YDI+SRLLKERII + GP+ + A++VVAQLLFLESE+P K I
Sbjct: 11 ALVPMVVEQTAKGERSYDIYSRLLKERIIFLVGPVEEHMANLVVAQLLFLESESPDKDIF 70
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
+Y+NSPGG VTAG+AIYDTMQ+I+ ++T+C+GQAASMG+ LLA G G+R LPNS +M
Sbjct: 71 LYINSPGGSVTAGMAIYDTMQFIKPDVSTVCIGQAASMGAFLLAGGAAGKRHCLPNSRVM 130
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQP GG+ GQA D+ IH ++I+ + D LN + +HTGQS+EVI+++ DRD FM+ +A
Sbjct: 131 IHQPLGGFQGQASDIAIHAQEILGIKDKLNQMLAEHTGQSLEVIERDTDRDNFMSAAQAA 190
Query: 213 EFGIIDEVIDQR 224
E+G+ID V+ ++
Sbjct: 191 EYGLIDSVMSKQ 202
>gi|292487467|ref|YP_003530339.1| ATP-dependent Clp protease proteolytic subunit ClpP [Erwinia
amylovora CFBP1430]
gi|292898709|ref|YP_003538078.1| ATP-dependent clp protease proteolytic subunit [Erwinia amylovora
ATCC 49946]
gi|428784402|ref|ZP_19001893.1| ATP-dependent Clp protease proteolytic subunit clpP [Erwinia
amylovora ACW56400]
gi|291198557|emb|CBJ45665.1| ATP-dependent clp protease proteolytic subunit [Erwinia amylovora
ATCC 49946]
gi|291552886|emb|CBA19931.1| ATP-dependent Clp protease proteolytic subunit clpP [Erwinia
amylovora CFBP1430]
gi|312171571|emb|CBX79829.1| ATP-dependent Clp protease proteolytic subunit clpP [Erwinia
amylovora ATCC BAA-2158]
gi|426275964|gb|EKV53691.1| ATP-dependent Clp protease proteolytic subunit clpP [Erwinia
amylovora ACW56400]
Length = 207
Score = 254 bits (649), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 108/199 (54%), Positives = 157/199 (78%)
Query: 26 QISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESE 85
+++A +L+PMV+E +SRGER+YDI+SRLLKERII + G + D A+++VAQ+LFLE+E
Sbjct: 8 ELTAPHMALVPMVVEQTSRGERSYDIYSRLLKERIIFLTGQVEDHMANLIVAQMLFLEAE 67
Query: 86 NPSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRA 145
NP K IH+Y+NSPGG +TAG++IYDTMQ+I+ ++TIC+GQA SMG+ LL +G KG+R
Sbjct: 68 NPEKDIHLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQACSMGAFLLTAGAKGKRYC 127
Query: 146 LPNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYF 205
LPNS +MIHQP GG+ GQA D+ IH ++I++ +N L KHTGQ+IE I+++ +RD F
Sbjct: 128 LPNSRVMIHQPLGGFQGQASDIDIHAREIIKTKQMMNELMAKHTGQTIENIERDTNRDRF 187
Query: 206 MTPEEAKEFGIIDEVIDQR 224
++ E+ E+G++D V+ QR
Sbjct: 188 LSASESVEYGLVDSVLSQR 206
>gi|225713510|gb|ACO12601.1| ATP-dependent Clp protease proteolytic subunit, mitochondrial
precursor [Lepeophtheirus salmonis]
Length = 222
Score = 254 bits (649), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 119/211 (56%), Positives = 165/211 (78%), Gaps = 2/211 (0%)
Query: 16 KFLQLSKPSAQISARSFS-LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHV 74
+ L ++ P + ARS S L+P+V+E + RGER+YDI+SRLLK+RIIC+ G ++D + +
Sbjct: 7 RLLSVNGP-MRAEARSMSGLVPIVVEQTGRGERSYDIYSRLLKDRIICLMGQVDDVISGL 65
Query: 75 VVAQLLFLESENPSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLL 134
+VAQLLFL++E+ KPIHMY+NSPGG VTAGLAIYDTMQYI+ PI T C+GQA SMGSLL
Sbjct: 66 MVAQLLFLQAESGKKPIHMYINSPGGSVTAGLAIYDTMQYIQPPIATWCVGQACSMGSLL 125
Query: 135 LASGTKGERRALPNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIE 194
L +GTKG R +LPNS IM+HQPSG GQA D+ I ++I+ + LN +Y KHTGQ ++
Sbjct: 126 LTAGTKGMRHSLPNSRIMVHQPSGQSHGQASDIQIQAQEILNLRARLNNIYVKHTGQPLD 185
Query: 195 VIQKNMDRDYFMTPEEAKEFGIIDEVIDQRP 225
+++K+MDRD FM+ ++A +FG+ID+V++ P
Sbjct: 186 IVEKSMDRDNFMSADDALKFGLIDKVLETPP 216
>gi|429768436|ref|ZP_19300592.1| endopeptidase Clp [Brevundimonas diminuta 470-4]
gi|429189126|gb|EKY29973.1| endopeptidase Clp [Brevundimonas diminuta 470-4]
Length = 213
Score = 254 bits (649), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 114/197 (57%), Positives = 152/197 (77%)
Query: 31 SFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKP 90
S +L+PMV+E SSRGER++DIFSRLL+ERII + GP D A ++ AQLLFLESENP K
Sbjct: 9 SNNLVPMVVEQSSRGERSFDIFSRLLRERIIFLTGPFEDGMASLICAQLLFLESENPKKE 68
Query: 91 IHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNST 150
I MY+NSPGGQVT+ LAIYDTMQYI+SP++T+ +G AAS GSL+L +G G+R ALPN+
Sbjct: 69 ISMYINSPGGQVTSALAIYDTMQYIKSPVSTVVMGMAASAGSLILTAGEAGQRIALPNAR 128
Query: 151 IMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEE 210
+M+HQPSGG+ G A D+ H + I+ LN +Y +HTG++ E +++ +DRD+FMT EE
Sbjct: 129 VMVHQPSGGFRGTASDIERHAEDIIATKRRLNEIYVQHTGRTYEEVERTLDRDHFMTAEE 188
Query: 211 AKEFGIIDEVIDQRPMA 227
AK +GI+D V D+R A
Sbjct: 189 AKAWGIVDHVYDKRSQA 205
>gi|358012229|ref|ZP_09144039.1| ATP-dependent Clp protease proteolytic subunit [Acinetobacter sp.
P8-3-8]
Length = 203
Score = 254 bits (649), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 109/193 (56%), Positives = 154/193 (79%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E SSRGER++DIFSRLL+ER+I + G + D+ A+++VAQ+LFLE+ENP K IH
Sbjct: 9 ALVPMVVEQSSRGERSFDIFSRLLRERVIFLTGEVEDNMANLIVAQMLFLEAENPDKDIH 68
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
+Y+NSPGG VTAG+AIYDTMQ+I+ + T C+GQAASMG+ LL +G KG+R L N+ +M
Sbjct: 69 LYINSPGGSVTAGMAIYDTMQFIKPDVVTYCMGQAASMGAFLLNAGAKGKRYCLENARVM 128
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQP GG+ GQA D+ IH ++I+ + + LN L +H+GQ E + K+ DRD FMT E+AK
Sbjct: 129 IHQPLGGFRGQASDIEIHAREILFIKERLNRLMAEHSGQDYERVAKDTDRDNFMTAEQAK 188
Query: 213 EFGIIDEVIDQRP 225
E+G++D+V+ +RP
Sbjct: 189 EYGLVDQVLSKRP 201
>gi|329890026|ref|ZP_08268369.1| clp protease family protein [Brevundimonas diminuta ATCC 11568]
gi|328845327|gb|EGF94891.1| clp protease family protein [Brevundimonas diminuta ATCC 11568]
Length = 213
Score = 254 bits (649), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 114/197 (57%), Positives = 152/197 (77%)
Query: 31 SFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKP 90
S +L+PMV+E SSRGER++DIFSRLL+ERII + GP D A ++ AQLLFLESENP K
Sbjct: 9 SNNLVPMVVEQSSRGERSFDIFSRLLRERIIFLTGPFEDGMASLICAQLLFLESENPKKE 68
Query: 91 IHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNST 150
I MY+NSPGGQVT+ LAIYDTMQYI+SP++T+ +G AAS GSL+L +G G+R ALPN+
Sbjct: 69 ISMYINSPGGQVTSALAIYDTMQYIKSPVSTVVMGMAASAGSLILTAGEAGQRIALPNAR 128
Query: 151 IMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEE 210
+M+HQPSGG+ G A D+ H + I+ LN +Y +HTG++ E +++ +DRD+FMT EE
Sbjct: 129 VMVHQPSGGFRGTASDIERHAEDIIATKRRLNEIYVQHTGRTYEEVERTLDRDHFMTAEE 188
Query: 211 AKEFGIIDEVIDQRPMA 227
AK +GI+D V D+R A
Sbjct: 189 AKAWGIVDHVYDKRTQA 205
>gi|312796430|ref|YP_004029352.1| ATP-dependent endopeptidase clp proteolytic subunit clpP
[Burkholderia rhizoxinica HKI 454]
gi|312168205|emb|CBW75208.1| ATP-dependent endopeptidase clp proteolytic subunit clpP (EC
3.4.21.92) [Burkholderia rhizoxinica HKI 454]
Length = 238
Score = 254 bits (649), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 113/199 (56%), Positives = 156/199 (78%)
Query: 27 ISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESEN 86
A++ L+PMV+E S RGERAYDI+SRLLKER++ + G +ND A++VVAQLLFLESEN
Sbjct: 40 FEAQALGLVPMVVETSGRGERAYDIYSRLLKERLVFLVGEVNDQAANLVVAQLLFLESEN 99
Query: 87 PSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRAL 146
P K I +Y+NSPGG V+AG+AIYDTMQ+I+ + T+C+G AASMG+ LLA+G KG+R AL
Sbjct: 100 PDKDISLYINSPGGSVSAGMAIYDTMQFIKPDVTTLCMGLAASMGAFLLAAGAKGKRIAL 159
Query: 147 PNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFM 206
PN+ +MIHQP GG GQA D+ I ++I+ + + LN L +HTGQ +E IQ++ DRD FM
Sbjct: 160 PNARVMIHQPLGGARGQASDIEIQAREILFLKERLNNLLAQHTGQPVEQIQRDTDRDNFM 219
Query: 207 TPEEAKEFGIIDEVIDQRP 225
+ E+A+ +G+ID+V+ +RP
Sbjct: 220 SAEDAQAYGLIDQVLHKRP 238
>gi|297616502|ref|YP_003701661.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Syntrophothermus lipocalidus DSM 12680]
gi|297144339|gb|ADI01096.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Syntrophothermus lipocalidus DSM 12680]
Length = 203
Score = 254 bits (649), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 109/188 (57%), Positives = 152/188 (80%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
L+P+V+E +SRGERAYDI+SRLLK+RI+ + PI+D A++++AQ LFLE+E+P K IH
Sbjct: 7 LVPIVVEQTSRGERAYDIYSRLLKDRIVFLGSPIDDQVANLIIAQFLFLEAEDPDKDIHF 66
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG ++AG+AI+DTMQY+R ++TIC+G AASMG+ LLA+G KG+R ALPNS IMI
Sbjct: 67 YINSPGGSISAGMAIFDTMQYLRPDVSTICVGMAASMGAFLLAAGAKGKRFALPNSEIMI 126
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQP GG GQA D+ IH ++IV + LN + + TGQ +EVI+++++RD+FMT EEAK
Sbjct: 127 HQPIGGTQGQATDIEIHARRIVNLKKRLNQILAERTGQKLEVIERDVERDFFMTAEEAKA 186
Query: 214 FGIIDEVI 221
+GIID++
Sbjct: 187 YGIIDDIF 194
>gi|452991802|emb|CCQ96761.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
ultunense Esp]
Length = 194
Score = 254 bits (648), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 113/192 (58%), Positives = 156/192 (81%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+P+V+E ++RGER+YDI+SRLLKERII + G +ND TA ++VAQLLFLE+E+P K I
Sbjct: 2 ALVPIVVEQTNRGERSYDIYSRLLKERIIFLGGEVNDVTADLIVAQLLFLEAEDPDKDIQ 61
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
+Y+NSPGG V+AG AIYDTMQYI+ ++TIC+G+AASMG+ LLA+G KG+R +LPNS IM
Sbjct: 62 LYINSPGGAVSAGFAIYDTMQYIKPDVSTICIGRAASMGAFLLAAGAKGKRFSLPNSDIM 121
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQP GG GQA+D+ IH ++I++ + +N + + TGQ +E I ++ DRD+FMT +EAK
Sbjct: 122 IHQPLGGTQGQAEDIRIHAEKIIQTRELINKILSERTGQPLEKISRDTDRDFFMTAKEAK 181
Query: 213 EFGIIDEVIDQR 224
E+GIID+VI R
Sbjct: 182 EYGIIDKVIQPR 193
>gi|302878843|ref|YP_003847407.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Gallionella
capsiferriformans ES-2]
gi|302581632|gb|ADL55643.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Gallionella
capsiferriformans ES-2]
Length = 202
Score = 254 bits (648), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 108/198 (54%), Positives = 157/198 (79%)
Query: 27 ISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESEN 86
+ ++ +IPMV+E S RGERAYDI+SRLLKER++ + G +ND +A+++VAQ+LFLESEN
Sbjct: 4 LEPQNIGMIPMVVETSGRGERAYDIYSRLLKERVVFLVGEVNDHSANLIVAQMLFLESEN 63
Query: 87 PSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRAL 146
P K IH Y+NSPGG VTAG+AIYDTMQ+I+ ++T+C+GQAASMG+ LL +G KG+R AL
Sbjct: 64 PDKDIHFYINSPGGSVTAGMAIYDTMQFIKPAVSTLCIGQAASMGAFLLTAGEKGKRFAL 123
Query: 147 PNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFM 206
PNS +MIHQP GG+ GQA D+ IH ++I+ + LN + HTGQ++E I+++ DRD F+
Sbjct: 124 PNSRVMIHQPLGGFRGQASDIEIHAREILYLKQKLNQMLADHTGQTVEAIERDTDRDNFL 183
Query: 207 TPEEAKEFGIIDEVIDQR 224
+ +A +G++D+V+++R
Sbjct: 184 SAADAVAYGLVDQVLEKR 201
>gi|225714260|gb|ACO12976.1| ATP-dependent Clp protease proteolytic subunit, mitochondrial
precursor [Lepeophtheirus salmonis]
Length = 222
Score = 254 bits (648), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 117/198 (59%), Positives = 159/198 (80%), Gaps = 1/198 (0%)
Query: 29 ARSFS-LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENP 87
ARS S L+P+V+E + RGER+YDI+SRLLK+RIIC+ G ++D + ++VAQLLFL++E+
Sbjct: 19 ARSMSRLVPIVVEQTGRGERSYDIYSRLLKDRIICLMGQVDDVISGLMVAQLLFLQAESG 78
Query: 88 SKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALP 147
KPIHMY+NSPGG VTAGLAIYDTMQYI+ PI T C+GQA SMGSLLL +GTKG R +LP
Sbjct: 79 KKPIHMYINSPGGSVTAGLAIYDTMQYIQPPIATWCVGQACSMGSLLLTAGTKGMRHSLP 138
Query: 148 NSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMT 207
NS IM+HQPSG GQA D+ I ++I+ + LN +Y KHTGQ +++++K+MDRD FM+
Sbjct: 139 NSRIMVHQPSGQSHGQASDIQIQAQEILNLRARLNNIYVKHTGQPLDIVEKSMDRDNFMS 198
Query: 208 PEEAKEFGIIDEVIDQRP 225
++A +FG+ID+V++ P
Sbjct: 199 ADDALKFGLIDKVLETPP 216
>gi|422023827|ref|ZP_16370329.1| ATP-dependent Clp protease proteolytic subunit [Providencia sneebia
DSM 19967]
gi|414091842|gb|EKT53523.1| ATP-dependent Clp protease proteolytic subunit [Providencia sneebia
DSM 19967]
Length = 206
Score = 254 bits (648), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 111/196 (56%), Positives = 154/196 (78%)
Query: 29 ARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPS 88
A +L+PMVIE +SRGER+YDI+SRLLKERII + G + D A+++VAQ+LFLE+ENP
Sbjct: 11 ASQMALVPMVIEQTSRGERSYDIYSRLLKERIIFLTGQVEDHMANLIVAQMLFLEAENPE 70
Query: 89 KPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPN 148
K IH+Y+NSPGG +TAG++IYDTMQ+I+ ++TIC+GQA SMG+ LL +GT+G+R LPN
Sbjct: 71 KDIHLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQACSMGAFLLTAGTEGKRFCLPN 130
Query: 149 STIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTP 208
S +MIHQP GGY GQA D+ IH ++I++V +N L KHTG+SIE I ++ +RD F++
Sbjct: 131 SRVMIHQPLGGYQGQATDIEIHAQEILKVKARMNELMAKHTGKSIEEINRDTERDRFLSA 190
Query: 209 EEAKEFGIIDEVIDQR 224
EAKE+G++D + R
Sbjct: 191 NEAKEYGLVDHIYTSR 206
>gi|212546731|ref|XP_002153519.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Talaromyces
marneffei ATCC 18224]
gi|210065039|gb|EEA19134.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Talaromyces
marneffei ATCC 18224]
Length = 257
Score = 254 bits (648), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 125/229 (54%), Positives = 167/229 (72%), Gaps = 7/229 (3%)
Query: 3 SMRNLLSRTSMATKFLQLSKPSAQISA---RSFSLIPMVIEHSSRGERAYDIFSRLLKER 59
S+R+ +++K S + ++S R ++ P V E G YDIFSRLLKER
Sbjct: 18 SIRSTFQSPFISSKLRAFSYLTPRLSGTAPRGWTPTPFVTETVGGGWHTYDIFSRLLKER 77
Query: 60 IICINGPINDDTAHVVVAQLLFLESENPSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPI 119
IIC+NG +++ T+ +VAQLLFLE++NP K IH+Y+NSPGG VTAGLAIYDTM YI+SP+
Sbjct: 78 IICLNGEVDETTSAAIVAQLLFLEADNPEKAIHLYINSPGGSVTAGLAIYDTMTYIQSPV 137
Query: 120 NTICLGQAASMGSLLLASGTKGERRALPNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWD 179
+TIC+GQAASMGSLLL G G+R LP+S+IMIHQPSGGY GQA D+ IH K+I+RV
Sbjct: 138 HTICVGQAASMGSLLLCGGHAGKRYCLPHSSIMIHQPSGGYFGQASDIAIHAKEILRVRT 197
Query: 180 ALNALYCKH-TGQ---SIEVIQKNMDRDYFMTPEEAKEFGIIDEVIDQR 224
LN +Y +H TG+ S++ I+K M+RDYFM +EA E GI+DE++D+R
Sbjct: 198 QLNQIYQRHLTGKKQLSLDEIEKLMERDYFMGAQEALEMGIVDEILDRR 246
>gi|340028581|ref|ZP_08664644.1| ATP-dependent Clp protease proteolytic subunit [Paracoccus sp. TRP]
Length = 209
Score = 254 bits (648), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 113/192 (58%), Positives = 156/192 (81%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E +SRGERAYDIFSRLLKERII ++G ++D A ++ AQLLFLE+ENP+K I
Sbjct: 11 TLVPMVVEQTSRGERAYDIFSRLLKERIIFLSGQVHDGMATLISAQLLFLEAENPTKDIS 70
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
MY+NSPGG VTAGL+IYDTMQYI+ ++T+ +GQAASMGSLLL +G G R +LPNS +M
Sbjct: 71 MYINSPGGVVTAGLSIYDTMQYIKPRVSTLVVGQAASMGSLLLCAGQPGMRFSLPNSRVM 130
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
+HQPSGG+ GQA D+ IH ++ ++ LN +Y KHTG+ + +++ ++RD FM+PEEAK
Sbjct: 131 VHQPSGGFQGQATDILIHARETEKLKRRLNEIYVKHTGRELSEVEEALERDRFMSPEEAK 190
Query: 213 EFGIIDEVIDQR 224
E+G+IDE+++ R
Sbjct: 191 EWGLIDEILEPR 202
>gi|376295039|ref|YP_005166269.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Desulfovibrio
desulfuricans ND132]
gi|323457600|gb|EGB13465.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Desulfovibrio
desulfuricans ND132]
Length = 202
Score = 254 bits (648), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 117/190 (61%), Positives = 150/190 (78%)
Query: 35 IPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHMY 94
IPMVIE + R ERAYDI+SRLLK+RII + I+D A ++ AQLLFLESE+P K I+MY
Sbjct: 4 IPMVIETTGRTERAYDIYSRLLKDRIILLGTAIDDHVASLICAQLLFLESEDPEKEIYMY 63
Query: 95 LNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMIH 154
+NSPGG VT+G+AIYDTMQYI +P+ T+C+GQAASM SLLL +G KG R +LP+S I+IH
Sbjct: 64 INSPGGVVTSGMAIYDTMQYISAPVATLCMGQAASMASLLLCAGEKGMRYSLPHSRILIH 123
Query: 155 QPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKEF 214
QP GG GQA D++IH K+I+R+ D LN + +HTGQSIE I + DRDYFM+ EEA E+
Sbjct: 124 QPLGGAQGQASDISIHAKEILRMKDELNGIMARHTGQSIEKITADTDRDYFMSSEEALEY 183
Query: 215 GIIDEVIDQR 224
G+ID+V+ R
Sbjct: 184 GLIDKVMKSR 193
>gi|163746712|ref|ZP_02154069.1| Endopeptidase Clp [Oceanibulbus indolifex HEL-45]
gi|161379826|gb|EDQ04238.1| Endopeptidase Clp [Oceanibulbus indolifex HEL-45]
Length = 218
Score = 254 bits (648), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 120/209 (57%), Positives = 160/209 (76%), Gaps = 1/209 (0%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E +SRGER+YDIFSRLLKERII +NGPI+ +H+VVAQLL LE+ENP+K I
Sbjct: 11 TLVPMVVEQTSRGERSYDIFSRLLKERIIFVNGPIHSGMSHLVVAQLLHLEAENPTKEIS 70
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
MY+NSPGG+VTAGL+IYDTMQYI+ ++T+ G AASMGS++ G KG R ALPN+ +M
Sbjct: 71 MYINSPGGEVTAGLSIYDTMQYIKPKVSTLICGMAASMGSVIAIGGEKGMRFALPNAEVM 130
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQPSGG G A+D+ I + I R + + LY KH+GQ ++V+QK +DRD +MTPEEAK
Sbjct: 131 IHQPSGGSQGMAEDILISARHIERTRERMYQLYVKHSGQPLDVVQKALDRDLWMTPEEAK 190
Query: 213 EFGIIDEVIDQRPMALVTDAVGREGKEGK 241
E+G +DE+++ R A A + GK+ K
Sbjct: 191 EWGHLDEIVESRGKAEDAAATAK-GKKDK 218
>gi|410446864|ref|ZP_11300967.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP [SAR86
cluster bacterium SAR86E]
gi|409980536|gb|EKO37287.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP [SAR86
cluster bacterium SAR86E]
Length = 204
Score = 254 bits (648), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 113/192 (58%), Positives = 155/192 (80%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
L+PMV+E + RGERA+DI+SRLLKERII ++GPI+D +++VVAQLLFLESENP K I +
Sbjct: 8 LVPMVVEQTPRGERAFDIYSRLLKERIIFLSGPIDDYISNLVVAQLLFLESENPEKDISI 67
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG +++GLAIYDTMQ+I ++T+C+GQAASMGSLLLA G KG+R AL NS IMI
Sbjct: 68 YINSPGGVISSGLAIYDTMQFIAPEVSTLCIGQAASMGSLLLAGGAKGKRFALTNSRIMI 127
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQP GG+ GQA D IH K+++ V +N + KHTG++++ ++++ DRD F+ +EAK
Sbjct: 128 HQPLGGFQGQASDFEIHAKEMLLVKQKVNEILSKHTGKTLKKVEQDTDRDNFLNAKEAKS 187
Query: 214 FGIIDEVIDQRP 225
+GIIDE+++ RP
Sbjct: 188 YGIIDEILESRP 199
>gi|197284027|ref|YP_002149899.1| ATP-dependent Clp protease proteolytic subunit [Proteus mirabilis
HI4320]
gi|226329068|ref|ZP_03804586.1| hypothetical protein PROPEN_02971 [Proteus penneri ATCC 35198]
gi|227358102|ref|ZP_03842444.1| ATP-dependent Clp protease proteolytic subunit [Proteus mirabilis
ATCC 29906]
gi|425066920|ref|ZP_18470036.1| ATP-dependent Clp protease proteolytic subunit [Proteus mirabilis
WGLW6]
gi|425073647|ref|ZP_18476753.1| ATP-dependent Clp protease proteolytic subunit [Proteus mirabilis
WGLW4]
gi|226706465|sp|B4EU53.1|CLPP_PROMH RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|194681514|emb|CAR40393.1| ATP-dependent Clp protease proteolytic subunit [Proteus mirabilis
HI4320]
gi|225202254|gb|EEG84608.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP [Proteus
penneri ATCC 35198]
gi|227161837|gb|EEI46869.1| ATP-dependent Clp protease proteolytic subunit [Proteus mirabilis
ATCC 29906]
gi|404594918|gb|EKA95473.1| ATP-dependent Clp protease proteolytic subunit [Proteus mirabilis
WGLW4]
gi|404601591|gb|EKB01983.1| ATP-dependent Clp protease proteolytic subunit [Proteus mirabilis
WGLW6]
Length = 207
Score = 254 bits (648), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 111/196 (56%), Positives = 158/196 (80%)
Query: 29 ARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPS 88
A + +L+PMVIE +SRGER+YDI+SRLLKERII + G + D A+++VAQ+LFLE+ENP
Sbjct: 11 APNMALVPMVIEQTSRGERSYDIYSRLLKERIIFLTGQVEDHMANLIVAQMLFLEAENPE 70
Query: 89 KPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPN 148
K I++Y+NSPGG +TAG++IYDTMQYI++ ++TIC+GQA SMG+ LL++G KG+R LPN
Sbjct: 71 KDINLYINSPGGVITAGMSIYDTMQYIKADVSTICMGQACSMGAFLLSAGAKGKRICLPN 130
Query: 149 STIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTP 208
S +MIHQP GGY GQA D+ IH ++I++V +N L +HTG+SIE I+++ +RD F++
Sbjct: 131 SRVMIHQPLGGYQGQATDIQIHAQEILKVKSRMNELMAQHTGKSIEEIERDTERDRFLSA 190
Query: 209 EEAKEFGIIDEVIDQR 224
EA E+G++D+V QR
Sbjct: 191 NEALEYGLVDKVYTQR 206
>gi|433542295|ref|ZP_20498724.1| ATP-dependent Clp protease proteolytic subunit [Brevibacillus agri
BAB-2500]
gi|432186391|gb|ELK43863.1| ATP-dependent Clp protease proteolytic subunit [Brevibacillus agri
BAB-2500]
Length = 198
Score = 254 bits (648), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 115/194 (59%), Positives = 154/194 (79%)
Query: 32 FSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPI 91
+LIP VIE ++RGERAYDI+SRLLK+RII + PIND A++VVAQLLFL++E+P K I
Sbjct: 1 MNLIPTVIEQTNRGERAYDIYSRLLKDRIIFLGTPINDTVANIVVAQLLFLQAEDPEKDI 60
Query: 92 HMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTI 151
H+Y+NSPGG +TAG+AIYDTM +I+ ++TIC+G AASMG+ LLA+GTKG+R ALPNS +
Sbjct: 61 HLYINSPGGSITAGMAIYDTMHFIKPDVSTICIGMAASMGAFLLAAGTKGKRYALPNSEV 120
Query: 152 MIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEA 211
MIHQP GG GQA D+ I K+I+++ D LN + + TGQ +E IQK+ DRD F++ +EA
Sbjct: 121 MIHQPLGGAQGQASDIEIAAKRILKMRDHLNTILAERTGQPLERIQKDTDRDNFLSAQEA 180
Query: 212 KEFGIIDEVIDQRP 225
E+G+ID+VI P
Sbjct: 181 VEYGLIDKVITSEP 194
>gi|77360986|ref|YP_340561.1| ATP-dependent Clp protease proteolytic subunit [Pseudoalteromonas
haloplanktis TAC125]
gi|110816463|sp|Q3IF46.1|CLPP_PSEHT RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|76875897|emb|CAI87118.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
(Caseinolytic protease) (Protease Ti)(Heat shock protein
F21.5) [Pseudoalteromonas haloplanktis TAC125]
Length = 205
Score = 254 bits (648), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 110/192 (57%), Positives = 151/192 (78%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E + +GER+YDI+SRLLKERII + GP+ D+ A++++AQ+LFLESENP K I
Sbjct: 11 ALVPMVVEQTPKGERSYDIYSRLLKERIIFLTGPVEDNMANLILAQMLFLESENPDKDIF 70
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
+Y+NSPGG VTAG+AIYDTM +I+ ++TIC+GQAASMG+ LL +G KG+R LPNS +M
Sbjct: 71 LYINSPGGSVTAGMAIYDTMNFIKPDVSTICVGQAASMGAFLLTAGAKGKRFCLPNSRVM 130
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQP GG+ GQA D IH K+I+ + D LN L +HTGQ ++VI K+ DRD FM+ ++A
Sbjct: 131 IHQPLGGFQGQASDFEIHAKEILSIKDKLNRLMAEHTGQPLDVISKDTDRDNFMSADQAV 190
Query: 213 EFGIIDEVIDQR 224
++GI+D V R
Sbjct: 191 DYGIVDSVFKNR 202
>gi|134295958|ref|YP_001119693.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
vietnamiensis G4]
gi|387902477|ref|YP_006332816.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia sp.
KJ006]
gi|166201808|sp|A4JF05.1|CLPP_BURVG RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|134139115|gb|ABO54858.1| ATP-dependent Clp protease proteolytic subunit ClpP [Burkholderia
vietnamiensis G4]
gi|387577369|gb|AFJ86085.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia sp.
KJ006]
Length = 217
Score = 254 bits (648), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 113/197 (57%), Positives = 157/197 (79%)
Query: 29 ARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPS 88
A++ L+P+V+E S RGER+YDI+SRLLKER++ + G +ND TA++VVAQLLFLESENP
Sbjct: 21 AQALGLVPIVVETSGRGERSYDIYSRLLKERLVFMVGEVNDQTANLVVAQLLFLESENPD 80
Query: 89 KPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPN 148
K I +Y+NSPGG V+AG+AIYDTMQ+I+ ++T+C+G AASMG+ LLASG KG+R ALPN
Sbjct: 81 KDISLYINSPGGSVSAGMAIYDTMQFIKPDVSTLCMGLAASMGAFLLASGAKGKRFALPN 140
Query: 149 STIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTP 208
S +MIHQP GG GQA D+ I ++I+ + + LN L +HTGQ +E I ++ DRD FM+
Sbjct: 141 SRVMIHQPLGGARGQASDIEIQAREILYLKERLNNLLAQHTGQDVERIARDTDRDNFMSS 200
Query: 209 EEAKEFGIIDEVIDQRP 225
++AK +G+ID+V+ +RP
Sbjct: 201 DDAKAYGLIDQVLLKRP 217
>gi|384084583|ref|ZP_09995758.1| ATP-dependent Clp protease proteolytic subunit [Acidithiobacillus
thiooxidans ATCC 19377]
Length = 214
Score = 254 bits (648), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 112/195 (57%), Positives = 157/195 (80%)
Query: 30 RSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSK 89
+ +P+V+E + RGER+YDI+SRLLKER+I + G + D A++VVAQLLFLE+ENP K
Sbjct: 14 QGLGYVPIVVEQTGRGERSYDIYSRLLKERVIFMVGQVEDMMANLVVAQLLFLEAENPDK 73
Query: 90 PIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNS 149
I +Y+NSPGG VTAG+AIYDTMQ+IR ++T+C+GQAASMG++LLA+G +G+R ALPN+
Sbjct: 74 DIALYINSPGGSVTAGMAIYDTMQFIRPKVSTVCIGQAASMGAVLLAAGAEGKRYALPNA 133
Query: 150 TIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPE 209
IM+HQPSGG+ GQA D+ IHTK+I+R+ + LN + HTGQS E I++++DRD+FM+ E
Sbjct: 134 RIMLHQPSGGFQGQAHDIEIHTKEILRIRERLNDILVHHTGQSRERIEQDLDRDFFMSAE 193
Query: 210 EAKEFGIIDEVIDQR 224
EA+ + ++D VI R
Sbjct: 194 EAQTYHLVDAVITHR 208
>gi|294011932|ref|YP_003545392.1| ATP-dependent Clp protease protease subunit [Sphingobium japonicum
UT26S]
gi|390167376|ref|ZP_10219367.1| ATP-dependent Clp protease proteolytic subunit [Sphingobium indicum
B90A]
gi|390167655|ref|ZP_10219636.1| ATP-dependent Clp protease proteolytic subunit [Sphingobium indicum
B90A]
gi|292675262|dbj|BAI96780.1| ATP-dependent Clp protease protease subunit [Sphingobium japonicum
UT26S]
gi|389589721|gb|EIM67735.1| ATP-dependent Clp protease proteolytic subunit [Sphingobium indicum
B90A]
gi|389590078|gb|EIM68083.1| ATP-dependent Clp protease proteolytic subunit [Sphingobium indicum
B90A]
Length = 211
Score = 254 bits (648), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 114/193 (59%), Positives = 153/193 (79%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+P+VIE S+RGER++DI+SRLL+ERII + G + D A ++VAQLLFLESENP K I
Sbjct: 11 ALVPIVIEQSNRGERSFDIYSRLLRERIIFVTGQVEDHMASLIVAQLLFLESENPKKDIW 70
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
MY+NSPGG VT+G+AI+DTM+YIR + T+C+GQAASMGS LLA+G G+R AL N+ IM
Sbjct: 71 MYINSPGGVVTSGMAIHDTMKYIRPQVGTVCIGQAASMGSFLLAAGEPGKRIALSNARIM 130
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
+HQPSGG G A D+ I K+I+R+ LN LY ++TG+S+E +++ MDRD F+ EEAK
Sbjct: 131 VHQPSGGAQGMASDIEIQAKEILRIRSRLNNLYVQYTGRSLEEVERAMDRDTFLEAEEAK 190
Query: 213 EFGIIDEVIDQRP 225
FG++DEV D+RP
Sbjct: 191 AFGLVDEVFDRRP 203
>gi|440226208|ref|YP_007333299.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Rhizobium
tropici CIAT 899]
gi|440037719|gb|AGB70753.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Rhizobium
tropici CIAT 899]
Length = 210
Score = 254 bits (648), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 112/194 (57%), Positives = 155/194 (79%)
Query: 31 SFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKP 90
+ +L+PMV+E ++RGER+YDI+SRLLKERII + GP+ D A +V AQLLFLE+ENP K
Sbjct: 8 AMALVPMVVEQTNRGERSYDIYSRLLKERIIFLTGPVEDHMATLVCAQLLFLEAENPKKE 67
Query: 91 IHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNST 150
I +Y+NSPGG VTAG+AIYDTMQ+I+ ++T+C+GQAASMGSLLLA+G K R A PNS
Sbjct: 68 IALYINSPGGVVTAGMAIYDTMQFIKPAVSTLCIGQAASMGSLLLAAGDKDMRFATPNSR 127
Query: 151 IMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEE 210
IM+HQPSGG+ GQA D+ H + I+++ LN +Y KH G++ E +++ +DRD+FM+ +E
Sbjct: 128 IMVHQPSGGFQGQASDIERHARDIIKMKRRLNEVYVKHCGRTYEEVEQTLDRDHFMSSDE 187
Query: 211 AKEFGIIDEVIDQR 224
AKE+G+ID+V+ R
Sbjct: 188 AKEWGLIDKVLTSR 201
>gi|126732556|ref|ZP_01748354.1| Protease subunit of ATP-dependent Clp protease [Sagittula stellata
E-37]
gi|126707002|gb|EBA06070.1| Protease subunit of ATP-dependent Clp protease [Sagittula stellata
E-37]
Length = 197
Score = 254 bits (648), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 113/188 (60%), Positives = 151/188 (80%)
Query: 37 MVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHMYLN 96
MV+E +SRGERAYDIFSRLLKERI+ +NGP++D + +VVAQLL LE+ENPSK I MY+N
Sbjct: 1 MVVEQTSRGERAYDIFSRLLKERIVFLNGPVHDGMSSLVVAQLLHLEAENPSKEISMYIN 60
Query: 97 SPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMIHQP 156
SPGG VT+GL+IYDTMQYI+ ++T+ +GQAASMGSLLL +G G R +LPNS IM+HQP
Sbjct: 61 SPGGVVTSGLSIYDTMQYIKPKVSTLVVGQAASMGSLLLTAGAAGMRFSLPNSRIMVHQP 120
Query: 157 SGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKEFGI 216
SGGY GQA D+ IH ++ +++ LN +Y +HTGQ+ E ++ ++RD FM E+AKE+G+
Sbjct: 121 SGGYQGQATDIMIHAEETIKLKRRLNEIYVRHTGQTYEAVEAALERDNFMDAEKAKEWGL 180
Query: 217 IDEVIDQR 224
IDE++ R
Sbjct: 181 IDEIVTSR 188
>gi|269102129|ref|ZP_06154826.1| ATP-dependent Clp protease proteolytic subunit [Photobacterium
damselae subsp. damselae CIP 102761]
gi|268162027|gb|EEZ40523.1| ATP-dependent Clp protease proteolytic subunit [Photobacterium
damselae subsp. damselae CIP 102761]
Length = 207
Score = 254 bits (648), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 110/192 (57%), Positives = 153/192 (79%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E +SRGER+YDI+SRLLKER+I + G + D A++VVAQLLFLESENP K I+
Sbjct: 15 ALVPMVVEQTSRGERSYDIYSRLLKERVIFLTGQVEDHMANLVVAQLLFLESENPDKDIY 74
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
+Y+NSPGG VTAG++IYDTMQ+I+ ++T+C+GQA SMG+ LLA G KG+R LPNS +M
Sbjct: 75 LYINSPGGSVTAGMSIYDTMQFIKPNVSTVCMGQACSMGAFLLAGGAKGKRYCLPNSRVM 134
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQP GG+ GQA D+ IH ++I+ + LN L +HTGQ +EVI+++ DRD FM+ ++A
Sbjct: 135 IHQPLGGFQGQASDIQIHAQEILTIKQKLNNLLAEHTGQPLEVIERDTDRDNFMSADQAV 194
Query: 213 EFGIIDEVIDQR 224
E+G++D V+ R
Sbjct: 195 EYGLVDAVLSHR 206
>gi|397687162|ref|YP_006524481.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
stutzeri DSM 10701]
gi|395808718|gb|AFN78123.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
stutzeri DSM 10701]
Length = 206
Score = 254 bits (648), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 113/195 (57%), Positives = 156/195 (80%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
L+PMVIE S+RGERAYDI+SRLLKER+I + G + D A+++VAQLLFLE+ENP K IH+
Sbjct: 12 LVPMVIEQSARGERAYDIYSRLLKERVIFMVGQVEDHMANLIVAQLLFLEAENPEKDIHL 71
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VTAG++IYDTMQ+I+ ++TIC+GQA SMG+LLL G G+R LP+S +MI
Sbjct: 72 YINSPGGSVTAGMSIYDTMQFIKPDVSTICIGQACSMGALLLTGGAAGKRYCLPHSRMMI 131
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQP GG+ GQA D+ IH ++I+ + + LN + +HTGQ +EVI ++ DRD FM+ EEA +
Sbjct: 132 HQPLGGFQGQASDIEIHAREILTIRERLNKVMAEHTGQPLEVIARDTDRDNFMSGEEAVK 191
Query: 214 FGIIDEVIDQRPMAL 228
+G+ID+V+ QR +A+
Sbjct: 192 YGLIDQVLTQRQLAV 206
>gi|387824404|ref|YP_005823875.1| ATP-dependent Clp protease proteolytic subunit [Francisella cf.
novicida 3523]
gi|328676003|gb|AEB28678.1| ATP-dependent Clp protease proteolytic subunit [Francisella cf.
novicida 3523]
Length = 201
Score = 254 bits (648), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 114/192 (59%), Positives = 152/192 (79%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+P VIE ++ GERA+DI+SRLLKERI+ +NG +ND +A++V+AQLLFLESE+P K I+
Sbjct: 5 NLVPTVIEKTAGGERAFDIYSRLLKERIVFLNGEVNDHSANLVIAQLLFLESEDPDKDIY 64
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
Y+NSPGG VTAG+ +YDTMQ+I+ ++TIC+G AASMGSLLLA G KG+R +LP+S IM
Sbjct: 65 FYINSPGGMVTAGMGVYDTMQFIKPDVSTICIGLAASMGSLLLAGGAKGKRYSLPSSQIM 124
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQP GG+ GQA D+ IH K I+R+ D LN + HTGQ ++ I K+ DRD FM +EAK
Sbjct: 125 IHQPLGGFRGQASDIEIHAKNILRIKDRLNKVLAHHTGQDLDTIIKDTDRDNFMMADEAK 184
Query: 213 EFGIIDEVIDQR 224
+G+ID VI+ R
Sbjct: 185 AYGLIDHVIESR 196
>gi|261346364|ref|ZP_05974008.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Providencia
rustigianii DSM 4541]
gi|282565678|gb|EFB71213.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Providencia
rustigianii DSM 4541]
Length = 206
Score = 254 bits (648), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 111/196 (56%), Positives = 153/196 (78%)
Query: 29 ARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPS 88
A +L+PMVIE +SRGER+YDI+SRLLKERII + G + D A+++VAQ+LFLE+ENP
Sbjct: 11 ASQMALVPMVIEQTSRGERSYDIYSRLLKERIIFLTGQVEDHMANLIVAQMLFLEAENPE 70
Query: 89 KPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPN 148
K IH+Y+NSPGG +TAG++IYDTMQ+I+ ++TIC+GQA SMG+ LL +GTKG+R LPN
Sbjct: 71 KDIHLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQACSMGAFLLTAGTKGKRFCLPN 130
Query: 149 STIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTP 208
S +MIHQP GGY GQA D+ IH ++I++V +N L HTG+SIE I ++ +RD F++
Sbjct: 131 SRVMIHQPLGGYQGQATDIEIHAQEILKVKSRMNELMAHHTGKSIEEISRDTERDRFLSA 190
Query: 209 EEAKEFGIIDEVIDQR 224
EAKE+G++D + R
Sbjct: 191 NEAKEYGLVDHIYTSR 206
>gi|291614263|ref|YP_003524420.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Sideroxydans
lithotrophicus ES-1]
gi|291584375|gb|ADE12033.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Sideroxydans
lithotrophicus ES-1]
Length = 208
Score = 254 bits (648), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 109/191 (57%), Positives = 156/191 (81%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
+IPMV+E S RGERAYDI+SRLLKER++ + G +ND TA+++VAQ+LFLESENP K IH
Sbjct: 17 MIPMVVESSGRGERAYDIYSRLLKERVVFLVGEVNDHTANLIVAQMLFLESENPDKDIHF 76
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG ++AG+AIYDTMQ+I+ ++T+C+G AASMG+ LL +G KG+R ALPNST+MI
Sbjct: 77 YINSPGGSISAGMAIYDTMQFIKPQVSTLCIGMAASMGAFLLQAGAKGKRFALPNSTVMI 136
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQP GG+ GQA D+ IH + I+ + + L AL +HTG+++E I ++ +RD F++ +EA E
Sbjct: 137 HQPLGGFRGQASDIEIHARYILSLRERLYALMAQHTGRTVEEIARDSERDNFLSAKEAVE 196
Query: 214 FGIIDEVIDQR 224
+G++D+V+D+R
Sbjct: 197 YGLVDQVLDKR 207
>gi|398919614|ref|ZP_10658869.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
sp. GM49]
gi|398169636|gb|EJM57614.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
sp. GM49]
Length = 211
Score = 254 bits (648), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 111/192 (57%), Positives = 152/192 (79%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
L+PMV+E S+RGERAYDI+SRLLKER+I + GP+ D A+++ AQLLFLE+ENP K IH+
Sbjct: 19 LVPMVVEQSARGERAYDIYSRLLKERVIFLVGPVEDYMANLICAQLLFLEAENPDKDIHL 78
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VTAG++IYDTMQ+I+ + T C+GQA SMG+ LL +G G+R LPNS +MI
Sbjct: 79 YINSPGGSVTAGMSIYDTMQFIKPNVATTCIGQACSMGAFLLTAGAPGKRYCLPNSRVMI 138
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQP GG+ GQA D+ IH K+I+ + + LN L H+G+++E I+++ +RD FM+ E A+E
Sbjct: 139 HQPLGGFQGQASDIEIHAKEILFIRERLNTLMAMHSGRTLEEIERDTNRDNFMSAEAARE 198
Query: 214 FGIIDEVIDQRP 225
+G+IDEVI QRP
Sbjct: 199 YGLIDEVITQRP 210
>gi|406937069|gb|EKD70636.1| ATP-dependent Clp protease proteolytic subunit [uncultured
bacterium]
Length = 207
Score = 254 bits (648), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 113/203 (55%), Positives = 162/203 (79%), Gaps = 3/203 (1%)
Query: 22 KPSAQISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLF 81
KP+ +++ +L+PMV+E ++RGERA+DI+SRLLK+R+I + GPI+D A+++VAQLLF
Sbjct: 4 KPNGVVTS---NLVPMVVEQTARGERAFDIYSRLLKDRVIFLGGPIDDYVANLIVAQLLF 60
Query: 82 LESENPSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKG 141
LESENP K I +Y+NSPGG VTAGLAIYDT+Q+I+ ++T+C+GQAASMG+LLLA+GT G
Sbjct: 61 LESENPDKDISIYINSPGGVVTAGLAIYDTIQFIKPAVSTMCIGQAASMGALLLAAGTAG 120
Query: 142 ERRALPNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMD 201
+R LPN+ +MIHQP GG GQA D+ IH ++ +++ LN + HTGQS EVI K+ D
Sbjct: 121 KRYCLPNARVMIHQPLGGVQGQASDIAIHAEETLKIRTRLNQILAHHTGQSEEVISKDTD 180
Query: 202 RDYFMTPEEAKEFGIIDEVIDQR 224
RD FM+ ++A ++GI+D+++D R
Sbjct: 181 RDNFMSADKAHKYGIVDKILDYR 203
>gi|399050633|ref|ZP_10740728.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Brevibacillus
sp. CF112]
gi|398051596|gb|EJL43914.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Brevibacillus
sp. CF112]
Length = 200
Score = 253 bits (647), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 115/194 (59%), Positives = 154/194 (79%)
Query: 32 FSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPI 91
+LIP VIE ++RGERAYDI+SRLLK+RII + PIND A++VVAQLLFL++E+P K I
Sbjct: 3 MNLIPTVIEQTNRGERAYDIYSRLLKDRIIFLGTPINDTVANIVVAQLLFLQAEDPEKDI 62
Query: 92 HMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTI 151
H+Y+NSPGG +TAG+AIYDTM +I+ ++TIC+G AASMG+ LLA+GTKG+R ALPNS +
Sbjct: 63 HLYINSPGGSITAGMAIYDTMHFIKPDVSTICIGMAASMGAFLLAAGTKGKRYALPNSEV 122
Query: 152 MIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEA 211
MIHQP GG GQA D+ I K+I+++ D LN + + TGQ +E IQK+ DRD F++ +EA
Sbjct: 123 MIHQPLGGAQGQASDIEIAAKRILKMRDHLNTILAERTGQPLERIQKDTDRDNFLSAQEA 182
Query: 212 KEFGIIDEVIDQRP 225
E+G+ID+VI P
Sbjct: 183 VEYGLIDKVITSEP 196
>gi|53719039|ref|YP_108025.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
pseudomallei K96243]
gi|121601387|ref|YP_993274.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia mallei
SAVP1]
gi|124386617|ref|YP_001029282.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia mallei
NCTC 10229]
gi|126440189|ref|YP_001059356.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
pseudomallei 668]
gi|126450257|ref|YP_001080784.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia mallei
NCTC 10247]
gi|126451473|ref|YP_001066627.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
pseudomallei 1106a]
gi|134277993|ref|ZP_01764708.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
pseudomallei 305]
gi|217421679|ref|ZP_03453183.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
pseudomallei 576]
gi|226197408|ref|ZP_03792985.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
pseudomallei Pakistan 9]
gi|237812684|ref|YP_002897135.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
pseudomallei MSHR346]
gi|238562204|ref|ZP_00440781.2| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
mallei GB8 horse 4]
gi|242317499|ref|ZP_04816515.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
pseudomallei 1106b]
gi|251766649|ref|ZP_02264557.2| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
mallei PRL-20]
gi|254178458|ref|ZP_04885113.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
mallei ATCC 10399]
gi|254189184|ref|ZP_04895695.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
pseudomallei Pasteur 52237]
gi|254206398|ref|ZP_04912750.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
mallei JHU]
gi|254258354|ref|ZP_04949408.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
pseudomallei 1710a]
gi|254297312|ref|ZP_04964765.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
pseudomallei 406e]
gi|254358192|ref|ZP_04974465.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
mallei 2002721280]
gi|386861423|ref|YP_006274372.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
pseudomallei 1026b]
gi|403519055|ref|YP_006653189.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
pseudomallei BPC006]
gi|418382821|ref|ZP_12966747.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
pseudomallei 354a]
gi|418533694|ref|ZP_13099553.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
pseudomallei 1026a]
gi|418540564|ref|ZP_13106094.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
pseudomallei 1258a]
gi|418546808|ref|ZP_13111999.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
pseudomallei 1258b]
gi|418553028|ref|ZP_13117869.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
pseudomallei 354e]
gi|67460243|sp|Q63V41.1|CLPP_BURPS RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|166201803|sp|A3MKJ8.1|CLPP_BURM7 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|166201804|sp|A2SBG3.1|CLPP_BURM9 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|166201805|sp|A1V4X1.1|CLPP_BURMS RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|166201806|sp|A3NWA6.1|CLPP_BURP0 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|166201807|sp|A3NAI5.1|CLPP_BURP6 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|52209453|emb|CAH35404.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
pseudomallei K96243]
gi|121230197|gb|ABM52715.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
mallei SAVP1]
gi|124294637|gb|ABN03906.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
mallei NCTC 10229]
gi|126219682|gb|ABN83188.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
pseudomallei 668]
gi|126225115|gb|ABN88655.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
pseudomallei 1106a]
gi|126243127|gb|ABO06220.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
mallei NCTC 10247]
gi|134251643|gb|EBA51722.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
pseudomallei 305]
gi|147753841|gb|EDK60906.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
mallei JHU]
gi|148027319|gb|EDK85340.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
mallei 2002721280]
gi|157807201|gb|EDO84371.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
pseudomallei 406e]
gi|157936863|gb|EDO92533.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
pseudomallei Pasteur 52237]
gi|160699497|gb|EDP89467.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
mallei ATCC 10399]
gi|217395421|gb|EEC35439.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
pseudomallei 576]
gi|225930787|gb|EEH26797.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
pseudomallei Pakistan 9]
gi|237504658|gb|ACQ96976.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
pseudomallei MSHR346]
gi|238523066|gb|EEP86507.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
mallei GB8 horse 4]
gi|242140738|gb|EES27140.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
pseudomallei 1106b]
gi|243065058|gb|EES47244.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
mallei PRL-20]
gi|254217043|gb|EET06427.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
pseudomallei 1710a]
gi|385360654|gb|EIF66568.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
pseudomallei 1026a]
gi|385361174|gb|EIF67066.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
pseudomallei 1258a]
gi|385362934|gb|EIF68724.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
pseudomallei 1258b]
gi|385372144|gb|EIF77269.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
pseudomallei 354e]
gi|385376976|gb|EIF81604.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
pseudomallei 354a]
gi|385658551|gb|AFI65974.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
pseudomallei 1026b]
gi|403074698|gb|AFR16278.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
pseudomallei BPC006]
Length = 217
Score = 253 bits (647), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 115/205 (56%), Positives = 156/205 (76%)
Query: 21 SKPSAQISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLL 80
S+ A++ L+P+V+E S RGER+YDI+SRLLKERI+ + G +ND TA++VVAQLL
Sbjct: 13 SQAPRDFEAQALGLVPIVVETSGRGERSYDIYSRLLKERIVFMVGEVNDQTANLVVAQLL 72
Query: 81 FLESENPSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTK 140
FLESENP K I +Y+NSPGG V+AG+AIYDTMQ+++ ++T+C+G AASMG+ LLASG K
Sbjct: 73 FLESENPDKDISLYINSPGGSVSAGMAIYDTMQFVKPDVSTLCMGLAASMGAFLLASGAK 132
Query: 141 GERRALPNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNM 200
G+R ALPN+ +MIHQP GG GQA D+ I ++I+ + D LN L HTGQ +E I ++
Sbjct: 133 GKRYALPNARVMIHQPLGGARGQASDIEIQAREILYLRDRLNHLLAHHTGQDVERIARDT 192
Query: 201 DRDYFMTPEEAKEFGIIDEVIDQRP 225
DRD FM+ E+AK +G+ID V +RP
Sbjct: 193 DRDNFMSSEDAKAYGLIDHVSTKRP 217
>gi|348026429|ref|YP_004766234.1| ATP-dependent Clp protease proteolytic subunit [Megasphaera
elsdenii DSM 20460]
gi|341822483|emb|CCC73407.1| ATP-dependent Clp protease proteolytic subunit [Megasphaera
elsdenii DSM 20460]
Length = 201
Score = 253 bits (647), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 113/192 (58%), Positives = 156/192 (81%), Gaps = 1/192 (0%)
Query: 35 IPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHMY 94
+P+V+E +++GER+YDI+SRLLK+RI+ + GPI+D A+ ++AQLLFLE+ENP K IH+Y
Sbjct: 6 VPIVVEQTAQGERSYDIYSRLLKDRIVFLGGPIDDAVANSIIAQLLFLEAENPDKDIHLY 65
Query: 95 LNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMIH 154
+NSPGG VTAG+AIYDTMQYI+ ++TIC+G AASM S+LL +G KG+R ALP+S +MIH
Sbjct: 66 INSPGGVVTAGMAIYDTMQYIKPDVSTICVGSAASMASVLLTAGAKGKRFALPHSQVMIH 125
Query: 155 QPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKEF 214
QP GG GQA ++ IH ++I+R+ LN + KHTGQ I+VIQK+ +RD FMT EEAK +
Sbjct: 126 QPLGGVQGQATEIEIHAREILRMRKELNGILSKHTGQPIDVIQKDTERDNFMTAEEAKAY 185
Query: 215 GIIDEVIDQRPM 226
G+IDE++ RP+
Sbjct: 186 GLIDEIL-TRPL 196
>gi|83718816|ref|YP_442643.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
thailandensis E264]
gi|167581577|ref|ZP_02374451.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
thailandensis TXDOH]
gi|167619693|ref|ZP_02388324.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
thailandensis Bt4]
gi|167836265|ref|ZP_02463148.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
thailandensis MSMB43]
gi|110816456|sp|Q2SWQ6.1|CLPP_BURTA RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|83652641|gb|ABC36704.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
thailandensis E264]
Length = 207
Score = 253 bits (647), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 115/205 (56%), Positives = 156/205 (76%)
Query: 21 SKPSAQISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLL 80
S+ A++ L+P+V+E S RGER+YDI+SRLLKERI+ + G +ND TA++VVAQLL
Sbjct: 3 SQAPRDFEAQALGLVPIVVETSGRGERSYDIYSRLLKERIVFMVGEVNDQTANLVVAQLL 62
Query: 81 FLESENPSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTK 140
FLESENP K I +Y+NSPGG V+AG+AIYDTMQ+++ ++T+C+G AASMG+ LLASG K
Sbjct: 63 FLESENPDKDISLYINSPGGSVSAGMAIYDTMQFVKPDVSTLCMGLAASMGAFLLASGAK 122
Query: 141 GERRALPNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNM 200
G+R ALPN+ +MIHQP GG GQA D+ I ++I+ + D LN L HTGQ +E I ++
Sbjct: 123 GKRYALPNARVMIHQPLGGARGQASDIEIQAREILYLKDRLNHLLAHHTGQDVERIARDT 182
Query: 201 DRDYFMTPEEAKEFGIIDEVIDQRP 225
DRD FM+ E+AK +G+ID V +RP
Sbjct: 183 DRDNFMSSEDAKAYGLIDHVSTKRP 207
>gi|167562414|ref|ZP_02355330.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
oklahomensis EO147]
gi|167569597|ref|ZP_02362471.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
oklahomensis C6786]
Length = 207
Score = 253 bits (647), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 115/205 (56%), Positives = 157/205 (76%)
Query: 21 SKPSAQISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLL 80
S+ A++ L+P+V+E S RGER+YDI+SRLLKERI+ + G +ND TA++VVAQLL
Sbjct: 3 SQAPRDFEAQALGLVPIVVETSGRGERSYDIYSRLLKERIVFMVGEVNDQTANLVVAQLL 62
Query: 81 FLESENPSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTK 140
FLESENP K I +Y+NSPGG V+AG+AIYDTMQ+++ ++T+C+G AASMG+ LLASG K
Sbjct: 63 FLESENPDKDISLYINSPGGSVSAGMAIYDTMQFVKPDVSTLCMGLAASMGAFLLASGAK 122
Query: 141 GERRALPNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNM 200
G+R ALPN+ +MIHQP GG GQA D+ I ++I+ + D LN L +HTGQ +E I ++
Sbjct: 123 GKRYALPNARVMIHQPLGGARGQASDIEIQAREILYLKDRLNHLLAQHTGQDVERIARDT 182
Query: 201 DRDYFMTPEEAKEFGIIDEVIDQRP 225
DRD FM+ E+AK +G+ID V +RP
Sbjct: 183 DRDNFMSSEDAKAYGLIDHVSIKRP 207
>gi|53723667|ref|YP_103112.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia mallei
ATCC 23344]
gi|76808778|ref|YP_333874.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
pseudomallei 1710b]
gi|167719122|ref|ZP_02402358.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
pseudomallei DM98]
gi|167738116|ref|ZP_02410890.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
pseudomallei 14]
gi|167815308|ref|ZP_02446988.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
pseudomallei 91]
gi|167823710|ref|ZP_02455181.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
pseudomallei 9]
gi|167845261|ref|ZP_02470769.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
pseudomallei B7210]
gi|167893805|ref|ZP_02481207.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
pseudomallei 7894]
gi|167902257|ref|ZP_02489462.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
pseudomallei NCTC 13177]
gi|167910496|ref|ZP_02497587.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
pseudomallei 112]
gi|167918525|ref|ZP_02505616.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
pseudomallei BCC215]
gi|67460238|sp|Q62JK7.1|CLPP_BURMA RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|92087004|sp|Q3JRC9.1|CLPP_BURP1 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|52427090|gb|AAU47683.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
mallei ATCC 23344]
gi|76578231|gb|ABA47706.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
pseudomallei 1710b]
Length = 207
Score = 253 bits (647), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 115/205 (56%), Positives = 156/205 (76%)
Query: 21 SKPSAQISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLL 80
S+ A++ L+P+V+E S RGER+YDI+SRLLKERI+ + G +ND TA++VVAQLL
Sbjct: 3 SQAPRDFEAQALGLVPIVVETSGRGERSYDIYSRLLKERIVFMVGEVNDQTANLVVAQLL 62
Query: 81 FLESENPSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTK 140
FLESENP K I +Y+NSPGG V+AG+AIYDTMQ+++ ++T+C+G AASMG+ LLASG K
Sbjct: 63 FLESENPDKDISLYINSPGGSVSAGMAIYDTMQFVKPDVSTLCMGLAASMGAFLLASGAK 122
Query: 141 GERRALPNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNM 200
G+R ALPN+ +MIHQP GG GQA D+ I ++I+ + D LN L HTGQ +E I ++
Sbjct: 123 GKRYALPNARVMIHQPLGGARGQASDIEIQAREILYLRDRLNHLLAHHTGQDVERIARDT 182
Query: 201 DRDYFMTPEEAKEFGIIDEVIDQRP 225
DRD FM+ E+AK +G+ID V +RP
Sbjct: 183 DRDNFMSSEDAKAYGLIDHVSTKRP 207
>gi|430762036|ref|YP_007217893.1| ATP-dependent Clp protease proteolytic subunit [Thioalkalivibrio
nitratireducens DSM 14787]
gi|430011660|gb|AGA34412.1| ATP-dependent Clp protease proteolytic subunit [Thioalkalivibrio
nitratireducens DSM 14787]
Length = 213
Score = 253 bits (647), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 110/206 (53%), Positives = 160/206 (77%)
Query: 19 QLSKPSAQISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQ 78
S+ + AR+ +L+PMV+E ++RGERAYDI+SRLLK+R++ GP+ D A+V+VAQ
Sbjct: 3 HFSEGAGAQHARALNLVPMVVEQTARGERAYDIYSRLLKDRVVFCVGPVEDYMANVIVAQ 62
Query: 79 LLFLESENPSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASG 138
LLFLESENP K I++Y+NSPGG VTAG+AIYDTMQ+I+ ++T+C+GQAASMG++LLA G
Sbjct: 63 LLFLESENPDKEINLYINSPGGAVTAGMAIYDTMQFIKPEVSTLCVGQAASMGAVLLAGG 122
Query: 139 TKGERRALPNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQK 198
G R L +S +MIHQP GGY GQA D+ IH ++I+++ + LN + H+GQS++ I+
Sbjct: 123 AAGRRYCLQHSRVMIHQPLGGYQGQATDIDIHAREILKIREELNQILAHHSGQSVDTIRN 182
Query: 199 NMDRDYFMTPEEAKEFGIIDEVIDQR 224
+ +RD FMT EA+E+G++D V+++R
Sbjct: 183 DTERDRFMTSPEAREYGLVDHVLEKR 208
>gi|420245135|ref|ZP_14748803.1| protease subunit of ATP-dependent protease [Rhizobium sp. CF080]
gi|398049111|gb|EJL41553.1| protease subunit of ATP-dependent protease [Rhizobium sp. CF080]
Length = 202
Score = 253 bits (647), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 112/194 (57%), Positives = 151/194 (77%)
Query: 31 SFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKP 90
+ L+PMVIE SSRGER++DI+SRLL+ERII +NG +ND + +V AQLLFLE+ENP +P
Sbjct: 4 AMQLVPMVIEQSSRGERSFDIYSRLLRERIIFLNGEVNDSVSALVCAQLLFLEAENPKRP 63
Query: 91 IHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNST 150
IH+Y+NSPGG VT+GLA+YDTM+YI +P++T+C+G A SMGS LL SG +GER ALPN++
Sbjct: 64 IHLYINSPGGVVTSGLAMYDTMRYIHAPVHTLCMGTARSMGSFLLMSGQRGERTALPNAS 123
Query: 151 IMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEE 210
I IHQP GG+ GQA DM IH +++ + + LY +H G+S E ++ MDRD FMT EE
Sbjct: 124 IHIHQPLGGFQGQASDMLIHAEEMQKTKHRMTRLYAEHCGRSYEDFERAMDRDRFMTAEE 183
Query: 211 AKEFGIIDEVIDQR 224
A E+G+ID ++ R
Sbjct: 184 ALEWGLIDRILQVR 197
>gi|153839648|ref|ZP_01992315.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
parahaemolyticus AQ3810]
gi|260902813|ref|ZP_05911208.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
parahaemolyticus AQ4037]
gi|417320363|ref|ZP_12106909.1| ATP-dependent Clp protease proteolytic subunit [Vibrio
parahaemolyticus 10329]
gi|433657174|ref|YP_007274553.1| ATP-dependent Clp protease proteolytic subunit [Vibrio
parahaemolyticus BB22OP]
gi|149746838|gb|EDM57826.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
parahaemolyticus AQ3810]
gi|308108649|gb|EFO46189.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
parahaemolyticus AQ4037]
gi|328473326|gb|EGF44174.1| ATP-dependent Clp protease proteolytic subunit [Vibrio
parahaemolyticus 10329]
gi|432507862|gb|AGB09379.1| ATP-dependent Clp protease proteolytic subunit [Vibrio
parahaemolyticus BB22OP]
Length = 208
Score = 253 bits (647), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 111/192 (57%), Positives = 151/192 (78%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E +SRGER+YDI+SRLLKER+I + G + D A++VVAQLLFLESENP K I
Sbjct: 15 ALVPMVVEQTSRGERSYDIYSRLLKERVIFLTGQVEDHMANLVVAQLLFLESENPDKDIF 74
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
+Y+NSPGG VTAG++IYDTMQ+I+ ++T+C+GQA SMG+ LLA G G+R LPNS +M
Sbjct: 75 LYINSPGGSVTAGMSIYDTMQFIKPNVSTVCMGQACSMGAFLLAGGAAGKRYVLPNSRVM 134
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQP GG+ GQA D+ IH ++I+ + LN L +HTGQ +EVI+++ DRD FM+ E+A
Sbjct: 135 IHQPLGGFQGQASDIQIHAQEILTIKQKLNNLLAEHTGQPLEVIERDTDRDNFMSAEQAV 194
Query: 213 EFGIIDEVIDQR 224
E+GI+D V+ R
Sbjct: 195 EYGIVDAVLSHR 206
>gi|68249290|ref|YP_248402.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
influenzae 86-028NP]
gi|161350016|ref|NP_438872.3| ATP-dependent Clp protease proteolytic subunit [Haemophilus
influenzae Rd KW20]
gi|260581528|ref|ZP_05849336.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Haemophilus
influenzae RdAW]
gi|1168977|sp|P43867.1|CLPP_HAEIN RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|81336285|sp|Q4QMK5.1|CLPP_HAEI8 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|1573716|gb|AAC22371.1| ATP-dependent Clp protease, proteolytic subunit (clpP) [Haemophilus
influenzae Rd KW20]
gi|68057489|gb|AAX87742.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
influenzae 86-028NP]
gi|260091826|gb|EEW75781.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Haemophilus
influenzae RdAW]
Length = 193
Score = 253 bits (647), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 113/192 (58%), Positives = 155/192 (80%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
S+IPMV+E +SRGER+YDI+SRLLKER+I ++G + D A+++VAQLLFLESE+P+K I+
Sbjct: 2 SVIPMVVEQTSRGERSYDIYSRLLKERVIFLSGEVEDRMANLIVAQLLFLESEDPTKDIN 61
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
+Y+NSPGG VTAG+AIYDTMQ+I+ I T+C+GQA SMG+ LLA GT G+R ALPN+ +M
Sbjct: 62 IYINSPGGSVTAGMAIYDTMQFIKPDIRTLCIGQACSMGAFLLAGGTAGKRAALPNARVM 121
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQP GG+ GQA D+ IH ++I+++ LN HTGQ IE I+K+ DRD FM+ EEA+
Sbjct: 122 IHQPLGGFRGQASDIQIHAQEILKIKHTLNDRLAFHTGQGIERIEKDTDRDNFMSAEEAQ 181
Query: 213 EFGIIDEVIDQR 224
+G++DEV+ +R
Sbjct: 182 AYGLVDEVLVKR 193
>gi|383816700|ref|ZP_09972092.1| ATP-dependent Clp protease proteolytic subunit [Serratia sp. M24T3]
gi|383294412|gb|EIC82754.1| ATP-dependent Clp protease proteolytic subunit [Serratia sp. M24T3]
Length = 209
Score = 253 bits (647), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 109/196 (55%), Positives = 158/196 (80%)
Query: 29 ARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPS 88
A + +L+PMV+E +SRGER+YDIFSRLLKERII + G + D A+++VAQ+LFLE+ENP
Sbjct: 11 APNMALVPMVVEQTSRGERSYDIFSRLLKERIIFLTGQVEDHMANLIVAQMLFLEAENPE 70
Query: 89 KPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPN 148
K I++Y+NSPGG +TAG++IYDTMQ+I+ ++TIC+GQA SMGS LL +G KG+R ALPN
Sbjct: 71 KDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQACSMGSFLLTAGAKGKRYALPN 130
Query: 149 STIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTP 208
S +MIHQP GG+ GQA D+ IH ++I++V + +N L +HTG+S+E I+++ +RD F++
Sbjct: 131 SRVMIHQPLGGFQGQATDIDIHAREILKVKNRMNTLMAQHTGKSLEEIERDTERDRFLSA 190
Query: 209 EEAKEFGIIDEVIDQR 224
EA E+G++D+V+ R
Sbjct: 191 SEAVEYGLVDKVMTHR 206
>gi|300856723|ref|YP_003781707.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
ljungdahlii DSM 13528]
gi|300436838|gb|ADK16605.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
ljungdahlii DSM 13528]
Length = 194
Score = 253 bits (647), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 111/193 (57%), Positives = 156/193 (80%)
Query: 32 FSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPI 91
SL+P+V+E +SRGER+YDI+SRLLK+RI+ ++ +ND +A +VVAQLLFLE+E+P K I
Sbjct: 1 MSLVPVVVEQTSRGERSYDIYSRLLKDRIVMLSEEVNDVSASLVVAQLLFLEAEDPDKDI 60
Query: 92 HMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTI 151
++Y+NSPGG +T+G+AIYDTMQYI+S ++TIC+G ASMG+ LL +G KG+R ALPN+ I
Sbjct: 61 YLYINSPGGSITSGMAIYDTMQYIKSDVSTICIGMGASMGAFLLTAGAKGKRFALPNAEI 120
Query: 152 MIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEA 211
MIHQP GG+ GQA D+ IH K+I+ + LN + + TGQ +E ++K+ +RD FMT EEA
Sbjct: 121 MIHQPLGGFQGQATDIGIHAKRILDIKKKLNTIISERTGQPLEKVEKDTERDNFMTAEEA 180
Query: 212 KEFGIIDEVIDQR 224
KE+G+IDEVI ++
Sbjct: 181 KEYGLIDEVITKK 193
>gi|253999170|ref|YP_003051233.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Methylovorus
glucosetrophus SIP3-4]
gi|313201272|ref|YP_004039930.1| ATP-dependent clp protease, proteolytic subunit clpp [Methylovorus
sp. MP688]
gi|253985849|gb|ACT50706.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Methylovorus
glucosetrophus SIP3-4]
gi|312440588|gb|ADQ84694.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Methylovorus
sp. MP688]
Length = 208
Score = 253 bits (647), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 113/200 (56%), Positives = 156/200 (78%)
Query: 25 AQISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLES 84
+Q + IPMVIE S RGERAYDI+SRLL+ER+I + GP+ND TA++VVAQLLFLE+
Sbjct: 5 SQWEPQGLGYIPMVIEQSGRGERAYDIYSRLLRERVIFLVGPVNDMTANLVVAQLLFLEA 64
Query: 85 ENPSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERR 144
ENP K I +Y+NSPGG VTAG+AIYDTMQ+I+ ++T+C+GQAASMG+LLL +G K +R
Sbjct: 65 ENPDKDISLYINSPGGSVTAGMAIYDTMQFIKPDVSTLCIGQAASMGALLLTAGAKDKRF 124
Query: 145 ALPNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDY 204
LPNS +MIHQP GG+ GQA D+ IH K+I+ + + LN + HTGQ ++VI+++ DRD
Sbjct: 125 CLPNSRVMIHQPLGGFQGQASDIEIHAKEILYLREKLNLILASHTGQPVDVIERDTDRDN 184
Query: 205 FMTPEEAKEFGIIDEVIDQR 224
FM+ +++ +G++D+VI R
Sbjct: 185 FMSAQQSVNYGLVDKVIASR 204
>gi|365884305|ref|ZP_09423363.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Bradyrhizobium sp. ORS 375]
gi|365287150|emb|CCD95894.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Bradyrhizobium sp. ORS 375]
Length = 205
Score = 253 bits (647), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 108/200 (54%), Positives = 159/200 (79%)
Query: 31 SFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKP 90
+ L+PMVIE SSRGER++DI+SRLL+ERI+ +NG +ND + +V AQLLFLE+ENP +P
Sbjct: 4 TMQLVPMVIEQSSRGERSFDIYSRLLRERIVFLNGEVNDTVSALVCAQLLFLEAENPKRP 63
Query: 91 IHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNST 150
IH+Y+NSPGG +T+GLA+YDTMQ++++P++T+C+G A SMGSLLL +G GER ALPN++
Sbjct: 64 IHLYINSPGGVITSGLAMYDTMQFVKAPVHTVCMGTARSMGSLLLMAGEPGERTALPNAS 123
Query: 151 IMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEE 210
+ +HQP GG+ GQA D+ IH ++I + + LY +H G+S E +++ +DRD+FMT +E
Sbjct: 124 LHVHQPLGGFQGQASDILIHAREIEQTKRRVIRLYAEHCGRSYEDVERTLDRDHFMTADE 183
Query: 211 AKEFGIIDEVIDQRPMALVT 230
A ++G+ID V+ QR +A V+
Sbjct: 184 ALDWGLIDRVVKQRDLASVS 203
>gi|218461999|ref|ZP_03502090.1| ATP-dependent Clp protease proteolytic subunit [Rhizobium etli Kim
5]
Length = 203
Score = 253 bits (647), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 112/194 (57%), Positives = 153/194 (78%)
Query: 31 SFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKP 90
+ L+PMVIE SSRGER++DI+SRLL+ERII +NG +ND + +V AQLLFLE+ENP KP
Sbjct: 4 AMQLVPMVIEQSSRGERSFDIYSRLLRERIIFLNGEVNDTVSALVCAQLLFLEAENPHKP 63
Query: 91 IHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNST 150
I++Y+NSPGG VT+GLA+YDTM++IR+P++T+C+G A SMGS LL +G G R ALPN++
Sbjct: 64 INLYINSPGGVVTSGLAMYDTMRFIRAPVHTLCMGTARSMGSFLLMAGEPGGRAALPNAS 123
Query: 151 IMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEE 210
I+IHQPSGG+ GQA DM IH ++I++ + LY +H G+S E ++ MDRD FMT EE
Sbjct: 124 ILIHQPSGGFQGQASDMLIHAEEILKTKQRMTRLYAEHCGRSYEDFERGMDRDRFMTAEE 183
Query: 211 AKEFGIIDEVIDQR 224
A E+G+ID ++ R
Sbjct: 184 ALEWGLIDRILKVR 197
>gi|126700924|ref|YP_001089821.1| ATP-dependent Clp protease proteolytic subunit 1 [Clostridium
difficile 630]
gi|254976904|ref|ZP_05273376.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile QCD-66c26]
gi|255094290|ref|ZP_05323768.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile CIP 107932]
gi|255308377|ref|ZP_05352548.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile ATCC 43255]
gi|255316044|ref|ZP_05357627.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile QCD-76w55]
gi|255518701|ref|ZP_05386377.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile QCD-97b34]
gi|255651823|ref|ZP_05398725.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile QCD-37x79]
gi|255657263|ref|ZP_05402672.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile QCD-23m63]
gi|260684849|ref|YP_003216134.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile CD196]
gi|260688507|ref|YP_003219641.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile R20291]
gi|296451896|ref|ZP_06893613.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile NAP08]
gi|296879709|ref|ZP_06903684.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile NAP07]
gi|306521610|ref|ZP_07407957.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile QCD-32g58]
gi|384362518|ref|YP_006200370.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile BI1]
gi|423081791|ref|ZP_17070390.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Clostridium difficile 002-P50-2011]
gi|423085912|ref|ZP_17074347.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Clostridium difficile 050-P50-2011]
gi|423089385|ref|ZP_17077744.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Clostridium difficile 70-100-2010]
gi|115252361|emb|CAJ70202.1| ATP-dependent Clp protease proteolytic subunit 1 [Clostridium
difficile 630]
gi|260211012|emb|CBA66324.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile CD196]
gi|260214524|emb|CBE07039.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile R20291]
gi|296259278|gb|EFH06156.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile NAP08]
gi|296429298|gb|EFH15170.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile NAP07]
gi|357548303|gb|EHJ30169.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Clostridium difficile 050-P50-2011]
gi|357549864|gb|EHJ31702.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Clostridium difficile 002-P50-2011]
gi|357558182|gb|EHJ39684.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Clostridium difficile 70-100-2010]
Length = 194
Score = 253 bits (647), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 113/194 (58%), Positives = 154/194 (79%)
Query: 32 FSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPI 91
+L+P+V+E + RGER+YDIFSRLLK+RII + +ND TA ++VAQLLFLE+E+P K I
Sbjct: 1 MALVPVVVEQTGRGERSYDIFSRLLKDRIIFLGDQVNDATAGLIVAQLLFLEAEDPDKDI 60
Query: 92 HMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTI 151
H+Y+NSPGG +T+G+AIYDTMQYI+ ++TIC+G AASMG+ LLA+G KG+R ALPNS I
Sbjct: 61 HLYINSPGGSITSGMAIYDTMQYIKPDVSTICIGMAASMGAFLLAAGAKGKRLALPNSEI 120
Query: 152 MIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEA 211
MIHQP GG GQA D+ IH K+I+++ + LN + + TGQ +E I+ + +RD FM+ EA
Sbjct: 121 MIHQPLGGAQGQATDIEIHAKRILKIKETLNEILSERTGQPLEKIKMDTERDNFMSALEA 180
Query: 212 KEFGIIDEVIDQRP 225
KE+G+IDEV +RP
Sbjct: 181 KEYGLIDEVFTKRP 194
>gi|257138854|ref|ZP_05587116.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
thailandensis E264]
gi|424903788|ref|ZP_18327301.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
thailandensis MSMB43]
gi|390931661|gb|EIP89062.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
thailandensis MSMB43]
Length = 217
Score = 253 bits (647), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 115/205 (56%), Positives = 156/205 (76%)
Query: 21 SKPSAQISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLL 80
S+ A++ L+P+V+E S RGER+YDI+SRLLKERI+ + G +ND TA++VVAQLL
Sbjct: 13 SQAPRDFEAQALGLVPIVVETSGRGERSYDIYSRLLKERIVFMVGEVNDQTANLVVAQLL 72
Query: 81 FLESENPSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTK 140
FLESENP K I +Y+NSPGG V+AG+AIYDTMQ+++ ++T+C+G AASMG+ LLASG K
Sbjct: 73 FLESENPDKDISLYINSPGGSVSAGMAIYDTMQFVKPDVSTLCMGLAASMGAFLLASGAK 132
Query: 141 GERRALPNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNM 200
G+R ALPN+ +MIHQP GG GQA D+ I ++I+ + D LN L HTGQ +E I ++
Sbjct: 133 GKRYALPNARVMIHQPLGGARGQASDIEIQAREILYLKDRLNHLLAHHTGQDVERIARDT 192
Query: 201 DRDYFMTPEEAKEFGIIDEVIDQRP 225
DRD FM+ E+AK +G+ID V +RP
Sbjct: 193 DRDNFMSSEDAKAYGLIDHVSTKRP 217
>gi|121611285|ref|YP_999092.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Verminephrobacter eiseniae EF01-2]
gi|166214720|sp|A1WR17.1|CLPP_VEREI RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|121555925|gb|ABM60074.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Verminephrobacter eiseniae EF01-2]
Length = 202
Score = 253 bits (647), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 110/198 (55%), Positives = 156/198 (78%)
Query: 27 ISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESEN 86
+ + +IPMVIE S RGER+YDI+SRLLKER+I + GP+ND TA++VVAQLLFLESEN
Sbjct: 4 LETQGLGMIPMVIEQSGRGERSYDIYSRLLKERVIFLVGPVNDQTANLVVAQLLFLESEN 63
Query: 87 PSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRAL 146
P K I Y+NSPGG V+AG+AI+DTM +I+ ++T+C G AASMG+ LLA+G KG+R AL
Sbjct: 64 PDKDISFYINSPGGSVSAGMAIFDTMNFIKPDVSTLCTGMAASMGAFLLAAGAKGKRFAL 123
Query: 147 PNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFM 206
PNS +MIHQP GG GQA ++ IH ++I++ + LN + + TGQ +E IQ++ +RDYF+
Sbjct: 124 PNSKVMIHQPLGGMQGQATEIEIHAREILKTREQLNKILAERTGQPLEKIQRDTERDYFL 183
Query: 207 TPEEAKEFGIIDEVIDQR 224
+ +E++E+G++D+VI +R
Sbjct: 184 SADESREYGLVDQVIHRR 201
>gi|354586092|ref|ZP_09004765.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Paenibacillus
lactis 154]
gi|353183068|gb|EHB48600.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Paenibacillus
lactis 154]
Length = 198
Score = 253 bits (647), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 111/193 (57%), Positives = 154/193 (79%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
S IPMV+E S+RGERAYDI+SRLLK+RII + +ND A+ ++AQ+LFL +E+P K IH
Sbjct: 2 SFIPMVVEQSNRGERAYDIYSRLLKDRIIFLGSDVNDVVANSIIAQMLFLSAEDPEKDIH 61
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
+Y+NSPGG +TAG+AI+DTMQ+I+ ++TIC+G AASMG+ LL +G KG+R ALPNS IM
Sbjct: 62 LYINSPGGSITAGMAIFDTMQFIKPDVSTICVGMAASMGAFLLNAGAKGKRYALPNSEIM 121
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQP GG GQA D+ I ++I+++ D LN + + TGQ +E I+K+ DRDYFMT EEAK
Sbjct: 122 IHQPLGGAQGQATDIEIRARRILKMRDKLNRILAERTGQPLERIEKDTDRDYFMTAEEAK 181
Query: 213 EFGIIDEVIDQRP 225
E+G++D+V+++ P
Sbjct: 182 EYGLVDQVLEKTP 194
>gi|350562401|ref|ZP_08931235.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thioalkalivibrio thiocyanoxidans ARh 4]
gi|349779343|gb|EGZ33689.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thioalkalivibrio thiocyanoxidans ARh 4]
Length = 213
Score = 253 bits (647), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 109/195 (55%), Positives = 157/195 (80%)
Query: 30 RSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSK 89
++ +L+PMV+E ++RGERAYDI+SRLLK+R++ GP+ D A+V+VAQLLFLESENP K
Sbjct: 14 QALNLVPMVVEQTARGERAYDIYSRLLKDRVVFCVGPVEDYMANVIVAQLLFLESENPDK 73
Query: 90 PIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNS 149
I +Y+NSPGG VTAG+AIYDTMQ+I+ ++T+C+GQAASMG++LLA G G+R L +S
Sbjct: 74 EISLYINSPGGAVTAGMAIYDTMQFIKPEVSTLCVGQAASMGAVLLAGGAAGKRYCLQHS 133
Query: 150 TIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPE 209
+MIHQP GGY GQA D+ IH ++I+++ + LN + +H+GQS+E I+ + +RD FMT
Sbjct: 134 RVMIHQPLGGYQGQATDIDIHAREILKIREELNQILSRHSGQSVETIRNDTERDRFMTAP 193
Query: 210 EAKEFGIIDEVIDQR 224
EAKE+G++D V+++R
Sbjct: 194 EAKEYGLVDHVLEKR 208
>gi|148381180|ref|YP_001255721.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
botulinum A str. ATCC 3502]
gi|153933152|ref|YP_001385555.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
botulinum A str. ATCC 19397]
gi|153934525|ref|YP_001388961.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
botulinum A str. Hall]
gi|153939192|ref|YP_001392582.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
botulinum F str. Langeland]
gi|168179119|ref|ZP_02613783.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
botulinum NCTC 2916]
gi|168183548|ref|ZP_02618212.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
botulinum Bf]
gi|170754567|ref|YP_001782870.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
botulinum B1 str. Okra]
gi|226950659|ref|YP_002805750.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
botulinum A2 str. Kyoto]
gi|237796687|ref|YP_002864239.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
botulinum Ba4 str. 657]
gi|384463549|ref|YP_005676144.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
botulinum F str. 230613]
gi|387819501|ref|YP_005679848.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
botulinum H04402 065]
gi|421839011|ref|ZP_16272698.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
botulinum CFSAN001627]
gi|429247534|ref|ZP_19210776.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
botulinum CFSAN001628]
gi|166201814|sp|A7FYI2.1|CLPP_CLOB1 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|166201815|sp|A5I6W1.1|CLPP_CLOBH RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|166201816|sp|A7GIH2.1|CLPP_CLOBL RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|226706445|sp|B1IND7.1|CLPP_CLOBK RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|254763786|sp|C1FLA6.1|CLPP_CLOBJ RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|148290664|emb|CAL84793.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
botulinum A str. ATCC 3502]
gi|152929196|gb|ABS34696.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
botulinum A str. ATCC 19397]
gi|152930439|gb|ABS35938.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
botulinum A str. Hall]
gi|152935088|gb|ABS40586.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
botulinum F str. Langeland]
gi|169119779|gb|ACA43615.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
botulinum B1 str. Okra]
gi|182670165|gb|EDT82141.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
botulinum NCTC 2916]
gi|182673367|gb|EDT85328.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
botulinum Bf]
gi|226842960|gb|ACO85626.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
botulinum A2 str. Kyoto]
gi|229261301|gb|ACQ52334.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
botulinum Ba4 str. 657]
gi|295320566|gb|ADG00944.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
botulinum F str. 230613]
gi|322807545|emb|CBZ05120.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
botulinum H04402 065]
gi|409736336|gb|EKN37768.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
botulinum CFSAN001627]
gi|428755428|gb|EKX78057.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
botulinum CFSAN001628]
Length = 194
Score = 253 bits (647), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 109/193 (56%), Positives = 158/193 (81%)
Query: 32 FSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPI 91
SL+P+V+E ++RGER+YDI+SRLLK+RII ++ +ND TA ++VAQLLFLE+E+P K I
Sbjct: 1 MSLVPVVVEQTNRGERSYDIYSRLLKDRIIMLSEEVNDTTASLIVAQLLFLEAEDPDKDI 60
Query: 92 HMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTI 151
H+Y+NSPGG +T+G+AIYDTMQYI+ ++TIC+G AASMG+ LLA+G KG+R ALPNS +
Sbjct: 61 HLYINSPGGSITSGMAIYDTMQYIKPDVSTICVGMAASMGAFLLAAGAKGKRYALPNSEV 120
Query: 152 MIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEA 211
MIHQP GG+ GQA D+ IH ++I+++ LN + TG+ +E ++ + +RD+F++ EEA
Sbjct: 121 MIHQPLGGFRGQATDIGIHAERILKMKKKLNTILSDRTGKPLEQVELDTERDHFLSAEEA 180
Query: 212 KEFGIIDEVIDQR 224
KE+G+IDEVID++
Sbjct: 181 KEYGLIDEVIDKK 193
>gi|83589392|ref|YP_429401.1| ATP-dependent Clp protease proteolytic subunit [Moorella
thermoacetica ATCC 39073]
gi|115311785|sp|Q2RL31.1|CLPP_MOOTA RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|83572306|gb|ABC18858.1| ATP-dependent Clp protease proteolytic subunit ClpP [Moorella
thermoacetica ATCC 39073]
Length = 199
Score = 253 bits (647), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 114/193 (59%), Positives = 155/193 (80%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
L+PMV+E +SRGERAYDI+SRLLK+RII + I+D A++V+AQ+LFLE+E+P K IH+
Sbjct: 4 LVPMVVEQTSRGERAYDIYSRLLKDRIIFLGSAIDDHVANLVIAQMLFLEAEDPDKDIHL 63
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG ++AG+AI+DTMQYIR ++TIC+G AASMG+ LLA+G KG+R ALPNS IMI
Sbjct: 64 YINSPGGSISAGMAIFDTMQYIRPDVSTICVGLAASMGAFLLAAGAKGKRFALPNSEIMI 123
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQP GG GQA D+ IH K+I+ + D LN + + TG+ +E I ++ DRD+FMT EA+E
Sbjct: 124 HQPMGGTQGQAVDIEIHAKRILAIRDNLNRILSEITGKPLEQIARDTDRDHFMTAREARE 183
Query: 214 FGIIDEVIDQRPM 226
+G+IDEVI +R +
Sbjct: 184 YGLIDEVITKREL 196
>gi|444912991|ref|ZP_21233148.1| ATP-dependent Clp protease proteolytic subunit [Cystobacter fuscus
DSM 2262]
gi|444716404|gb|ELW57255.1| ATP-dependent Clp protease proteolytic subunit [Cystobacter fuscus
DSM 2262]
Length = 205
Score = 253 bits (647), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 119/199 (59%), Positives = 155/199 (77%)
Query: 32 FSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPI 91
F +P VIE + RGER+YDI+SRLLK+RI+ + I+DD A+V+V+QLLFLESE+P K I
Sbjct: 3 FMPVPYVIEQTHRGERSYDIYSRLLKDRIVMLGTEIDDDVANVIVSQLLFLESEDPDKDI 62
Query: 92 HMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTI 151
++Y+NSPGG VTAGLAIYDTMQY++ ++TIC+GQAASMG++LL +G KG+R ALP+S I
Sbjct: 63 NLYINSPGGSVTAGLAIYDTMQYVKPNVSTICVGQAASMGAVLLLAGAKGKRYALPSSRI 122
Query: 152 MIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEA 211
MIHQP GG GQA D+ I K+I+R+ LN L KHTGQ IE ++K+ DRDYFM EA
Sbjct: 123 MIHQPLGGVRGQATDIEIQAKEILRMRAKLNELIVKHTGQPIERVEKDTDRDYFMGAAEA 182
Query: 212 KEFGIIDEVIDQRPMALVT 230
K +GI+DEV + R + L T
Sbjct: 183 KAYGILDEVQNPRKIPLPT 201
>gi|422299469|ref|ZP_16387036.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
avellanae BPIC 631]
gi|407988618|gb|EKG31111.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
avellanae BPIC 631]
Length = 192
Score = 253 bits (647), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 113/190 (59%), Positives = 151/190 (79%)
Query: 37 MVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHMYLN 96
MVIE S+RGERAYDI+SRLLKER+I + GP+ D A+++ AQLLFLE+ENP K IH+Y+N
Sbjct: 1 MVIEQSARGERAYDIYSRLLKERVIFMVGPVEDYMANLIAAQLLFLEAENPDKDIHLYIN 60
Query: 97 SPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMIHQP 156
SPGG VTAG++IYDTMQ+I+ ++TIC+GQA SMG+ LLA G +G+R LPNS +MIHQP
Sbjct: 61 SPGGSVTAGMSIYDTMQFIKPDVSTICIGQACSMGAFLLAGGAEGKRHCLPNSRMMIHQP 120
Query: 157 SGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKEFGI 216
GG+ GQA D+ IH K+I+ + LN+L HTGQS+E I+++ +RD FM+ E A E+G+
Sbjct: 121 LGGFQGQASDIDIHAKEILHIRHRLNSLLAHHTGQSLETIERDTERDNFMSAERAAEYGL 180
Query: 217 IDEVIDQRPM 226
ID VI++R M
Sbjct: 181 IDSVINKRQM 190
>gi|166031009|ref|ZP_02233838.1| hypothetical protein DORFOR_00690 [Dorea formicigenerans ATCC
27755]
gi|346308246|ref|ZP_08850367.1| ATP-dependent Clp protease proteolytic subunit [Dorea
formicigenerans 4_6_53AFAA]
gi|166029276|gb|EDR48033.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP [Dorea
formicigenerans ATCC 27755]
gi|345903543|gb|EGX73306.1| ATP-dependent Clp protease proteolytic subunit [Dorea
formicigenerans 4_6_53AFAA]
Length = 193
Score = 253 bits (647), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 119/192 (61%), Positives = 149/192 (77%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
SL+P VIE +SRGER+YDI+SRLLK+RII + D +A V +AQLLFLE+E+P K IH
Sbjct: 2 SLVPYVIEQTSRGERSYDIYSRLLKDRIIFFGEEVTDASASVAIAQLLFLEAEDPEKDIH 61
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
+Y+NSPGG V+AGLAIYDTMQYI+ I TIC+G AASMGS LLA GTKG+R ALPNS IM
Sbjct: 62 LYINSPGGSVSAGLAIYDTMQYIKCDIETICIGMAASMGSFLLAGGTKGKRLALPNSEIM 121
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQPSGG GQA ++ I + I++ + LN + ++TGQ +EVI + DRD FM+ EEAK
Sbjct: 122 IHQPSGGAQGQATEIQIAAEHILKTRERLNRILAENTGQPLEVISRETDRDNFMSAEEAK 181
Query: 213 EFGIIDEVIDQR 224
FG+IDEVI +R
Sbjct: 182 AFGLIDEVITRR 193
>gi|342214320|ref|ZP_08707021.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Veillonella
sp. oral taxon 780 str. F0422]
gi|341594551|gb|EGS37240.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Veillonella
sp. oral taxon 780 str. F0422]
Length = 199
Score = 253 bits (647), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 114/187 (60%), Positives = 152/187 (81%)
Query: 35 IPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHMY 94
+P+V+E + RGER+YDI+SRLLK+RII ++GPI+D A+ +VAQLLFLESE+P K IH+Y
Sbjct: 5 VPIVVEQTGRGERSYDIYSRLLKDRIILLSGPIDDTVANSIVAQLLFLESEDPDKDIHLY 64
Query: 95 LNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMIH 154
+NSPGG VTAG+AIYDTMQYI+ ++TIC+G AASMGSLLL +G G+R ALP+S IMIH
Sbjct: 65 INSPGGVVTAGMAIYDTMQYIKPDVSTICVGSAASMGSLLLTAGAPGKRYALPHSRIMIH 124
Query: 155 QPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKEF 214
QP GG GQA ++ IH ++I+R+ + LN + HTGQ IEVI ++ DRD FM+ E+AK +
Sbjct: 125 QPLGGVQGQASEIEIHAREILRLREELNGVLAYHTGQPIEVIAQDTDRDNFMSAEDAKRY 184
Query: 215 GIIDEVI 221
G+IDEV+
Sbjct: 185 GLIDEVL 191
>gi|381170418|ref|ZP_09879575.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Xanthomonas
citri pv. mangiferaeindicae LMG 941]
gi|384426842|ref|YP_005636199.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Xanthomonas
campestris pv. raphani 756C]
gi|390990707|ref|ZP_10260988.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Xanthomonas
axonopodis pv. punicae str. LMG 859]
gi|341935942|gb|AEL06081.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Xanthomonas
campestris pv. raphani 756C]
gi|372554560|emb|CCF67963.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Xanthomonas
axonopodis pv. punicae str. LMG 859]
gi|380689079|emb|CCG36062.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Xanthomonas
citri pv. mangiferaeindicae LMG 941]
Length = 196
Score = 253 bits (647), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 113/189 (59%), Positives = 154/189 (81%)
Query: 37 MVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHMYLN 96
MV+E +SRGERAYDI+SRLLKER+I + GPI+D A+V+VAQLLFLE++NP K I +Y+N
Sbjct: 1 MVVEQTSRGERAYDIYSRLLKERLIFLVGPIDDHMANVIVAQLLFLEADNPEKDISIYIN 60
Query: 97 SPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMIHQP 156
SPGG VTAG+AIYDTMQYI+ ++TIC+GQAASMG+LLLASG G+R ALPNS +MIHQP
Sbjct: 61 SPGGVVTAGMAIYDTMQYIKPDVSTICVGQAASMGALLLASGAAGKRYALPNSRVMIHQP 120
Query: 157 SGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKEFGI 216
GG+ GQA D+ IH ++I+ + LN + KHTGQS+E I ++ +RD F + +A+ +G+
Sbjct: 121 LGGFQGQATDIDIHAREILTLRSRLNEILAKHTGQSLETIARDTERDNFKSAVDAQAYGL 180
Query: 217 IDEVIDQRP 225
+D+V+++RP
Sbjct: 181 VDQVLERRP 189
>gi|238484703|ref|XP_002373590.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Aspergillus
flavus NRRL3357]
gi|317140707|ref|XP_001818368.2| ATP-dependent Clp protease proteolytic subunit [Aspergillus oryzae
RIB40]
gi|220701640|gb|EED57978.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Aspergillus
flavus NRRL3357]
gi|391870538|gb|EIT79718.1| ATP-dependent Clp protease, proteolytic subunit [Aspergillus oryzae
3.042]
Length = 256
Score = 253 bits (647), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 135/248 (54%), Positives = 173/248 (69%), Gaps = 17/248 (6%)
Query: 3 SMRNLLSRTSMATKFLQLSKPSAQISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIIC 62
S+ +LSR S + LSK S R ++ P V E G YDIFSRLLKERIIC
Sbjct: 18 SVLPVLSR-SFTSSVPSLSKGSP---PRGWTPTPFVTETVGGGWHTYDIFSRLLKERIIC 73
Query: 63 INGPINDDTAHVVVAQLLFLESENPSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTI 122
+NG +++ + +VAQLLFLE++NP KPIH+Y+NSPGG VTAGLAIYDTM YI SP++TI
Sbjct: 74 LNGEVDETMSASIVAQLLFLEADNPQKPIHLYINSPGGSVTAGLAIYDTMTYIASPVSTI 133
Query: 123 CLGQAASMGSLLLASGTKGERRALPNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALN 182
C+GQAASMGSLLL G G+R LP+S+IMIHQPSGGY GQA D+ IH K+I+RV + LN
Sbjct: 134 CVGQAASMGSLLLCGGHPGKRYCLPHSSIMIHQPSGGYFGQATDIAIHAKEILRVREQLN 193
Query: 183 ALYCKH-TGQ---SIEVIQKNMDRDYFMTPEEAKEFGIIDEVIDQRPMALVTDAVGREGK 238
+Y +H TG+ S++ I+K M+RDYFM +EA E GI+DE++D+R R +
Sbjct: 194 KIYKRHLTGKKELSLDEIEKLMERDYFMGAQEALEMGIVDEILDRR---------VRSKE 244
Query: 239 EGKEGKEK 246
E EG EK
Sbjct: 245 ERGEGDEK 252
>gi|221065471|ref|ZP_03541576.1| Endopeptidase Clp [Comamonas testosteroni KF-1]
gi|220710494|gb|EED65862.1| Endopeptidase Clp [Comamonas testosteroni KF-1]
Length = 201
Score = 253 bits (647), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 107/198 (54%), Positives = 158/198 (79%)
Query: 31 SFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKP 90
S L+PMV+E S+RGER++DI+SRLL++R+I +NG +ND + +V AQLLFLE+ENP KP
Sbjct: 4 SMMLVPMVVEQSARGERSFDIYSRLLRDRVIFLNGEVNDAVSALVCAQLLFLEAENPDKP 63
Query: 91 IHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNST 150
IH+Y+NSPGG +T+GLA+YDTMQ+I+SP++T+C+G A SMGS LL +G G R ALPN++
Sbjct: 64 IHLYINSPGGVITSGLAMYDTMQFIKSPVHTLCMGTARSMGSFLLMAGEPGHRMALPNAS 123
Query: 151 IMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEE 210
+ +HQP GG GQA D+ IH ++++R D + LY +H G+S + +++++DRD FMT +E
Sbjct: 124 LHVHQPLGGVQGQASDIRIHAEEMLRTKDRVTRLYAQHCGRSYQEVERDLDRDRFMTAKE 183
Query: 211 AKEFGIIDEVIDQRPMAL 228
A+E+G+ID+V+D+R L
Sbjct: 184 AREWGLIDKVLDRRTATL 201
>gi|254179427|ref|ZP_04886026.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
pseudomallei 1655]
gi|254200063|ref|ZP_04906429.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
mallei FMH]
gi|147749659|gb|EDK56733.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
mallei FMH]
gi|184209967|gb|EDU07010.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
pseudomallei 1655]
Length = 211
Score = 253 bits (647), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 115/205 (56%), Positives = 156/205 (76%)
Query: 21 SKPSAQISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLL 80
S+ A++ L+P+V+E S RGER+YDI+SRLLKERI+ + G +ND TA++VVAQLL
Sbjct: 7 SQAPRDFEAQALGLVPIVVETSGRGERSYDIYSRLLKERIVFMVGEVNDQTANLVVAQLL 66
Query: 81 FLESENPSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTK 140
FLESENP K I +Y+NSPGG V+AG+AIYDTMQ+++ ++T+C+G AASMG+ LLASG K
Sbjct: 67 FLESENPDKDISLYINSPGGSVSAGMAIYDTMQFVKPDVSTLCMGLAASMGAFLLASGAK 126
Query: 141 GERRALPNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNM 200
G+R ALPN+ +MIHQP GG GQA D+ I ++I+ + D LN L HTGQ +E I ++
Sbjct: 127 GKRYALPNARVMIHQPLGGARGQASDIEIQAREILYLRDRLNHLLAHHTGQDVERIARDT 186
Query: 201 DRDYFMTPEEAKEFGIIDEVIDQRP 225
DRD FM+ E+AK +G+ID V +RP
Sbjct: 187 DRDNFMSSEDAKAYGLIDHVSTKRP 211
>gi|452747927|ref|ZP_21947716.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
stutzeri NF13]
gi|452008076|gb|EME00320.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
stutzeri NF13]
Length = 206
Score = 253 bits (647), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 113/195 (57%), Positives = 157/195 (80%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
L+PMVIE S+RGERAYDI+SRLLKER+I + G + D A+++VAQ+LFLE+ENP K IH+
Sbjct: 12 LVPMVIEQSARGERAYDIYSRLLKERVIFMVGQVEDYMANLIVAQMLFLEAENPEKDIHL 71
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VTAG++IYDTMQ+I+ ++TIC+GQA SMG+LLLA GT G+R LP+S +MI
Sbjct: 72 YINSPGGSVTAGMSIYDTMQFIKPDVSTICIGQACSMGALLLAGGTAGKRYCLPHSRMMI 131
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQP GG+ GQA D+ IH ++I+ + + LN + HTGQ ++VI ++ DRD FM+ EEA +
Sbjct: 132 HQPLGGFQGQASDIEIHAREILTIRERLNKVLAHHTGQPMDVIARDTDRDNFMSGEEAVK 191
Query: 214 FGIIDEVIDQRPMAL 228
+G+ID+V+ QR +A+
Sbjct: 192 YGLIDQVLTQRQLAV 206
>gi|392551110|ref|ZP_10298247.1| ATP-dependent Clp protease proteolytic subunit [Pseudoalteromonas
spongiae UST010723-006]
Length = 203
Score = 253 bits (646), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 109/192 (56%), Positives = 154/192 (80%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E +++GER+YDI+SRLLKER+I + G + D+ A+++VAQLLFLESENP K I
Sbjct: 11 ALVPMVVEQTAKGERSYDIYSRLLKERVIFLTGQVEDNMANLIVAQLLFLESENPEKDIF 70
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
+Y+NSPGG VTAG+AIYDTM++I+ I+T+C+GQAASMG+ LL+ GTKG+R LPNS +M
Sbjct: 71 IYINSPGGSVTAGMAIYDTMKFIKPNISTVCIGQAASMGAFLLSGGTKGKRFCLPNSRVM 130
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQP GG+ GQA D IH K+I+ + D LN L +HTGQ +EV+ + DRD FM+ ++A
Sbjct: 131 IHQPLGGFQGQASDFEIHAKEILSIKDKLNRLMAEHTGQPLEVVSNDTDRDNFMSAQQAV 190
Query: 213 EFGIIDEVIDQR 224
++G++D ++ QR
Sbjct: 191 DYGLVDGILSQR 202
>gi|95930403|ref|ZP_01313139.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfuromonas acetoxidans DSM 684]
gi|95133443|gb|EAT15106.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfuromonas acetoxidans DSM 684]
Length = 196
Score = 253 bits (646), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 109/189 (57%), Positives = 157/189 (83%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
SL+P+V+E + RGER+YDI+SRLLK+RII + G I+D +++V+AQLLFLESE+P K IH
Sbjct: 2 SLVPIVVEQTGRGERSYDIYSRLLKDRIIFLGGGIDDQISNLVIAQLLFLESEDPEKDIH 61
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
+Y+NSPGG VTAG+AIYDTMQYI++P++TIC+GQAASMG++LLA+G +G+R LPNS IM
Sbjct: 62 LYINSPGGVVTAGMAIYDTMQYIKAPVSTICVGQAASMGAVLLAAGAEGKRFTLPNSRIM 121
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQP GG+ GQA D++IH ++I+R+ + LN + H Q IE I ++ +RD+FM E+A+
Sbjct: 122 IHQPLGGFQGQASDISIHAQEILRLREDLNRILAHHCSQDIETIARDTERDFFMGAEDAQ 181
Query: 213 EFGIIDEVI 221
++G+ID+++
Sbjct: 182 KYGLIDKIV 190
>gi|89896100|ref|YP_519587.1| hypothetical protein DSY3354 [Desulfitobacterium hafniense Y51]
gi|219670517|ref|YP_002460952.1| ATP-dependent Clp protease proteolytic subunit [Desulfitobacterium
hafniense DCB-2]
gi|116243113|sp|Q24S49.1|CLPP2_DESHY RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|89335548|dbj|BAE85143.1| hypothetical protein [Desulfitobacterium hafniense Y51]
gi|219540777|gb|ACL22516.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfitobacterium hafniense DCB-2]
Length = 202
Score = 253 bits (646), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 113/193 (58%), Positives = 158/193 (81%), Gaps = 3/193 (1%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
L+PMVIE ++RGER+YDI+SRLLK+RII + GP+ DD A++VVAQ+LFLE+E+P K I +
Sbjct: 4 LVPMVIEQTNRGERSYDIYSRLLKDRIIFLGGPVTDDVANLVVAQMLFLEAEDPEKDIFL 63
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG ++AG+AIYDTMQYIR+ ++TIC+G AASMG+ LL +G KG+R+ALPN+ I+I
Sbjct: 64 YINSPGGSISAGMAIYDTMQYIRADVHTICVGLAASMGAFLLTAGAKGKRQALPNAEILI 123
Query: 154 HQP---SGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEE 210
HQP GG SGQA ++ IH K ++RV + +N + + TGQ+IE I+ + DRD +MT EE
Sbjct: 124 HQPLIGGGGISGQATEIEIHAKHLLRVKERMNRILAERTGQTIERIEADTDRDRYMTAEE 183
Query: 211 AKEFGIIDEVIDQ 223
AKE+G+IDEV+++
Sbjct: 184 AKEYGLIDEVLEK 196
>gi|295676517|ref|YP_003605041.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
sp. CCGE1002]
gi|295436360|gb|ADG15530.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
sp. CCGE1002]
Length = 217
Score = 253 bits (646), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 113/205 (55%), Positives = 159/205 (77%)
Query: 21 SKPSAQISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLL 80
S+ S + A++ L+P+V+E S RGER+YDI+SRLLKERI+ + G +ND TA++VVAQ+L
Sbjct: 13 SQSSRDLEAQALGLVPIVVETSGRGERSYDIYSRLLKERIVFLVGEVNDQTANLVVAQML 72
Query: 81 FLESENPSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTK 140
FLESENP K I+ Y+NSPGG V+AG+AIYDTMQ+I+ ++T+C+G AASMG+ LLA+G K
Sbjct: 73 FLESENPDKDIYFYINSPGGSVSAGMAIYDTMQFIKPDVSTLCMGLAASMGAFLLAAGAK 132
Query: 141 GERRALPNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNM 200
G+R ALPNS +MIHQP GG GQA D+ I ++I+ + D LN L HTGQ +E I ++
Sbjct: 133 GKRFALPNSRVMIHQPLGGARGQASDIEIQAREILYLKDRLNHLLAHHTGQPVERIARDT 192
Query: 201 DRDYFMTPEEAKEFGIIDEVIDQRP 225
DRD FM+ ++A+ +G++D+V +RP
Sbjct: 193 DRDNFMSGDDAQAYGLVDQVAHKRP 217
>gi|398382789|ref|ZP_10540870.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Sphingobium
sp. AP49]
gi|397726189|gb|EJK86630.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Sphingobium
sp. AP49]
Length = 211
Score = 253 bits (646), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 115/193 (59%), Positives = 151/193 (78%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+P+VIE S+RGER++DI+SRLL+ERII + G + D A ++VAQLLFLESENP K I
Sbjct: 11 ALVPIVIEQSNRGERSFDIYSRLLRERIIFVTGQVEDHMASLIVAQLLFLESENPKKDIW 70
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
MY+NSPGG VT+G+AI+DTM+YIR + T+C+GQAASMGS LLA+G G+R AL N+ IM
Sbjct: 71 MYINSPGGVVTSGMAIHDTMKYIRPQVGTVCIGQAASMGSFLLAAGEPGKRIALSNARIM 130
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQPSGG G A D+ I K+I+R+ LN LY +TG+ +E I++ MDRD F+ EEAK
Sbjct: 131 IHQPSGGAQGMASDIEIQAKEILRIRQRLNGLYANYTGKPLEEIERAMDRDTFLEAEEAK 190
Query: 213 EFGIIDEVIDQRP 225
FG++DEV D+RP
Sbjct: 191 AFGLVDEVFDRRP 203
>gi|343517775|ref|ZP_08754771.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Haemophilus
pittmaniae HK 85]
gi|343394626|gb|EGV07173.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Haemophilus
pittmaniae HK 85]
Length = 195
Score = 253 bits (646), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 112/192 (58%), Positives = 155/192 (80%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
S+IPMV+E +SRGER+YDI+SRLLKER+I ++G + D A+++VAQLLFLESE+P K I+
Sbjct: 2 SVIPMVVEQTSRGERSYDIYSRLLKERVIFLSGEVEDHMANLIVAQLLFLESEDPDKDIN 61
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
+Y+NSPGG VTAG+AIYDTMQ+I+ + T+C+GQA SMG+ LLA GT G+R ALPN+ +M
Sbjct: 62 IYINSPGGSVTAGMAIYDTMQFIKPDVRTLCIGQACSMGAFLLAGGTAGKRAALPNARVM 121
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQP GG+ GQA D+ IH ++I+++ LN HTGQSIE I+K+ DRD FM+ +EAK
Sbjct: 122 IHQPLGGFRGQASDIQIHAQEILKIKQTLNDRLAFHTGQSIERIEKDTDRDNFMSAQEAK 181
Query: 213 EFGIIDEVIDQR 224
++G++D V+ +R
Sbjct: 182 DYGLVDAVLLKR 193
>gi|335037269|ref|ZP_08530578.1| ATP-dependent Clp protease proteolytic subunit [Agrobacterium sp.
ATCC 31749]
gi|333791293|gb|EGL62681.1| ATP-dependent Clp protease proteolytic subunit [Agrobacterium sp.
ATCC 31749]
Length = 202
Score = 253 bits (646), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 111/194 (57%), Positives = 151/194 (77%)
Query: 31 SFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKP 90
+ L+PMV+E SSRGER++DI+SRLL+ERII +NG +ND + +V AQLLFLE+ENP KP
Sbjct: 4 TMQLVPMVVEQSSRGERSFDIYSRLLRERIIFLNGEVNDTVSALVCAQLLFLEAENPKKP 63
Query: 91 IHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNST 150
IH+Y+NSPGG VT+G A+YDTM+YIR+P++T+C+G A SMGS LL +G G R ALPN++
Sbjct: 64 IHLYINSPGGMVTSGFAMYDTMRYIRAPVHTLCMGTARSMGSFLLMAGEPGTRAALPNAS 123
Query: 151 IMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEE 210
I+IHQPSGG+ GQA DM IH ++I + + LY +H G+S E + MDRD FMT +E
Sbjct: 124 ILIHQPSGGFQGQASDMLIHAEEIRQTKHRMTRLYAEHCGRSYEEFETAMDRDRFMTVQE 183
Query: 211 AKEFGIIDEVIDQR 224
A E+G+ID +++ R
Sbjct: 184 ALEWGLIDRILEVR 197
>gi|222085564|ref|YP_002544094.1| ATP-dependent Clp protease proteolytic subunit [Agrobacterium
radiobacter K84]
gi|398378316|ref|ZP_10536480.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Rhizobium sp.
AP16]
gi|221723012|gb|ACM26168.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Agrobacterium
radiobacter K84]
gi|397725070|gb|EJK85526.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Rhizobium sp.
AP16]
Length = 210
Score = 253 bits (646), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 112/194 (57%), Positives = 155/194 (79%)
Query: 31 SFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKP 90
+ +L+PMV+E ++RGER+YDI+SRLLKERII + GP+ D A +V AQLLFLE+ENP K
Sbjct: 8 AMALVPMVVEQTNRGERSYDIYSRLLKERIIFLTGPVEDHMATLVCAQLLFLEAENPKKE 67
Query: 91 IHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNST 150
I +Y+NSPGG VTAG+AIYDTMQ+I+ I+T+C+GQAASMGSLLLA+G K R A PNS
Sbjct: 68 IALYINSPGGVVTAGMAIYDTMQFIKPAISTLCIGQAASMGSLLLAAGDKDMRFATPNSR 127
Query: 151 IMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEE 210
IM+HQPSGG+ GQA D+ H + I+++ LN +Y KH G++ E +++ +DRD+FM+ +E
Sbjct: 128 IMVHQPSGGFQGQASDIERHARDIIKMKRRLNEIYVKHCGRTYEEVEQTLDRDHFMSSDE 187
Query: 211 AKEFGIIDEVIDQR 224
AK++G+ID+V+ R
Sbjct: 188 AKDWGLIDKVLTSR 201
>gi|395493607|ref|ZP_10425186.1| ATP-dependent Clp protease proteolytic subunit [Sphingomonas sp.
PAMC 26617]
gi|404253934|ref|ZP_10957902.1| ATP-dependent Clp protease proteolytic subunit [Sphingomonas sp.
PAMC 26621]
Length = 233
Score = 253 bits (646), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 121/199 (60%), Positives = 154/199 (77%), Gaps = 1/199 (0%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
L+P+VIE S+RGER++DI+SRLL+ERII I G + D A V+ AQLLFLESENP K I M
Sbjct: 27 LVPIVIEQSNRGERSFDIYSRLLRERIIFITGGVEDHMASVISAQLLFLESENPKKDIFM 86
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VTAG+AI+DTMQYIR + T+C+GQAASMGS LLA+G G R AL N+ IMI
Sbjct: 87 YINSPGGVVTAGMAIHDTMQYIRPRVGTVCMGQAASMGSFLLAAGEPGMRVALTNARIMI 146
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQPSGG G A D+ I K+I R+ + +NALY ++TG+ IE I++ MDRD F+ EAKE
Sbjct: 147 HQPSGGAQGMASDIQIQAKEIQRIKNRMNALYAQYTGKPIEEIERAMDRDTFLEAHEAKE 206
Query: 214 FGIIDEVIDQRPMALVTDA 232
FG++D+V D+RP AL D+
Sbjct: 207 FGLVDQVFDKRP-ALPDDS 224
>gi|424887930|ref|ZP_18311533.1| protease subunit of ATP-dependent protease [Rhizobium leguminosarum
bv. trifolii WSM2012]
gi|424895332|ref|ZP_18318906.1| protease subunit of ATP-dependent protease [Rhizobium leguminosarum
bv. trifolii WSM2297]
gi|393173479|gb|EJC73523.1| protease subunit of ATP-dependent protease [Rhizobium leguminosarum
bv. trifolii WSM2012]
gi|393179559|gb|EJC79598.1| protease subunit of ATP-dependent protease [Rhizobium leguminosarum
bv. trifolii WSM2297]
Length = 203
Score = 253 bits (646), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 112/194 (57%), Positives = 151/194 (77%)
Query: 31 SFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKP 90
+ L+PMV+E S+RGER++DI+SRLL+ERII +NG +ND + +V AQLLFLE+ENP +P
Sbjct: 4 AMQLVPMVVEQSNRGERSFDIYSRLLRERIIFLNGEVNDTVSALVCAQLLFLEAENPKRP 63
Query: 91 IHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNST 150
IH+Y+NSPGG VT+GLA+YDTM+YIR+P++T+C+G A SMGS LL SG GER ALPNS+
Sbjct: 64 IHLYINSPGGVVTSGLAMYDTMRYIRAPVHTLCMGTARSMGSFLLMSGQPGERTALPNSS 123
Query: 151 IMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEE 210
I IHQP GG+ GQA DM IH +++ R + LY +H G++ E ++ MDRD FMT EE
Sbjct: 124 IHIHQPLGGFQGQASDMFIHAEEMRRTKHRMTRLYAEHCGRTYEEFEQAMDRDRFMTAEE 183
Query: 211 AKEFGIIDEVIDQR 224
A E+G+ID ++ R
Sbjct: 184 AVEWGLIDRILQVR 197
>gi|148553517|ref|YP_001261099.1| ATP-dependent Clp protease proteolytic subunit [Sphingomonas
wittichii RW1]
gi|148498707|gb|ABQ66961.1| Endopeptidase Clp [Sphingomonas wittichii RW1]
Length = 218
Score = 253 bits (646), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 118/193 (61%), Positives = 149/193 (77%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+P+VIE S+RGER++DI+SRLL+ERII + G + D A ++ AQLLFLESENP K I
Sbjct: 17 ALVPVVIEQSNRGERSFDIYSRLLRERIIFVTGQVEDHMASLITAQLLFLESENPKKDIF 76
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
MY+NSPGG VTAGLAI+DTMQYIR + T+C+GQAASMGS LLA+G G R AL NS IM
Sbjct: 77 MYINSPGGVVTAGLAIHDTMQYIRPRVGTVCIGQAASMGSFLLAAGEPGMRVALTNSRIM 136
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
+HQPSGG G A D+ I ++I+R+ LN+LY K+T Q IE I+ MDRD F+ +EAK
Sbjct: 137 VHQPSGGAQGMAADIEIQAREILRMRHRLNSLYAKYTKQPIEAIEAAMDRDKFLEADEAK 196
Query: 213 EFGIIDEVIDQRP 225
FG+IDEV D+RP
Sbjct: 197 AFGLIDEVFDKRP 209
>gi|222055723|ref|YP_002538085.1| ATP-dependent Clp protease proteolytic subunit [Geobacter daltonii
FRC-32]
gi|254763790|sp|B9M0Y1.1|CLPP_GEOSF RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|221565012|gb|ACM20984.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Geobacter
daltonii FRC-32]
Length = 199
Score = 253 bits (646), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 110/188 (58%), Positives = 155/188 (82%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
L+P+V+E + RGER+YDI+SRLLK+RII + G I+D +++V+AQLLFLE+E+P K IH+
Sbjct: 2 LVPIVVEQTGRGERSYDIYSRLLKDRIIFLGGAIDDTVSNLVIAQLLFLEAEDPDKDIHL 61
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VTAG+AIYDTM+YI++P++TIC+GQAASMG+ LL+ G KG+R +L NS IMI
Sbjct: 62 YINSPGGVVTAGMAIYDTMRYIKAPVSTICVGQAASMGAFLLSGGEKGKRFSLANSRIMI 121
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQP GG+ GQA D+ IH ++I+R+ LN L +H+GQ++E I+ + +RDYFM+ E+AK
Sbjct: 122 HQPLGGFQGQATDIHIHAQEILRMKKKLNELLAEHSGQTVEKIEADTERDYFMSGEDAKT 181
Query: 214 FGIIDEVI 221
+GIID +I
Sbjct: 182 YGIIDSII 189
>gi|183601061|ref|ZP_02962554.1| hypothetical protein PROSTU_04684 [Providencia stuartii ATCC 25827]
gi|386742738|ref|YP_006215917.1| ATP-dependent Clp protease proteolytic subunit [Providencia
stuartii MRSN 2154]
gi|188019401|gb|EDU57441.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Providencia stuartii ATCC 25827]
gi|384479431|gb|AFH93226.1| ATP-dependent Clp protease proteolytic subunit [Providencia
stuartii MRSN 2154]
Length = 206
Score = 253 bits (646), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 111/196 (56%), Positives = 154/196 (78%)
Query: 29 ARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPS 88
A +L+PMVIE +SRGER+YDI+SRLLKERII + G + D A+++VAQ+LFLE+ENP
Sbjct: 11 ASQMALVPMVIEQTSRGERSYDIYSRLLKERIIFLTGQVEDHMANLIVAQMLFLEAENPE 70
Query: 89 KPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPN 148
K I +Y+NSPGG +TAG++IYDTMQ+I+ ++TIC+GQA SMGS LLA+GTKG+R LPN
Sbjct: 71 KDIQLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQACSMGSFLLAAGTKGKRFCLPN 130
Query: 149 STIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTP 208
S +MIHQP GGY GQA D+ IH ++I++V +N L HTG+S+E I ++ +RD F++
Sbjct: 131 SRVMIHQPLGGYQGQATDIQIHAQEILKVKTRMNELMALHTGKSVEEINRDTERDRFLSA 190
Query: 209 EEAKEFGIIDEVIDQR 224
+EAKE+G++D + R
Sbjct: 191 DEAKEYGLVDHIYTSR 206
>gi|334141356|ref|YP_004534562.1| ATP-dependent Clp protease, protease subunit [Novosphingobium sp.
PP1Y]
gi|359397994|ref|ZP_09191018.1| ATP-dependent Clp protease, protease subunit [Novosphingobium
pentaromativorans US6-1]
gi|333939386|emb|CCA92744.1| ATP-dependent Clp protease, protease subunit [Novosphingobium sp.
PP1Y]
gi|357600412|gb|EHJ62107.1| ATP-dependent Clp protease, protease subunit [Novosphingobium
pentaromativorans US6-1]
Length = 222
Score = 253 bits (646), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 114/195 (58%), Positives = 154/195 (78%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E +SRGER++DI+SRLL+ERI+ + G + D A ++VAQLLFLESENPSK I
Sbjct: 22 ALVPMVVEQTSRGERSFDIYSRLLRERIVFVTGEVEDHMASLIVAQLLFLESENPSKDIS 81
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
MY+NSPGG VTAG+AI+DTMQYI+ ++T+C+GQAASMGS LLA+G G R ALPN+ IM
Sbjct: 82 MYINSPGGVVTAGMAIHDTMQYIKPRVSTVCIGQAASMGSFLLAAGEPGMRIALPNARIM 141
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
+HQPSGG G A D+ I ++I+R+ LN LY K+TG+S++ I++ MDRD F+ EEA
Sbjct: 142 VHQPSGGARGMASDIEIQAREILRMRKRLNDLYVKYTGKSLDEIEQAMDRDTFLEAEEAL 201
Query: 213 EFGIIDEVIDQRPMA 227
FG++D+V + RP A
Sbjct: 202 AFGLVDKVFETRPDA 216
>gi|408417896|ref|YP_006759310.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Desulfobacula
toluolica Tol2]
gi|405105109|emb|CCK78606.1| ClpP: ATP-dependent Clp protease, proteolytic subunit
[Desulfobacula toluolica Tol2]
Length = 207
Score = 253 bits (646), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 115/191 (60%), Positives = 149/191 (78%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
LIPMV+E S+RGERAYDI+SRLLK+RII I I+D+ A+++VAQ LFLESE+P K I
Sbjct: 3 LIPMVVEQSNRGERAYDIYSRLLKDRIIFIGSAIDDEIANLIVAQFLFLESEDPEKDISF 62
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VTAG+AIYDTMQYI+ + T+C+GQAASMG+LLL +GTKG+R ALPNS IMI
Sbjct: 63 YINSPGGVVTAGMAIYDTMQYIKPDVATVCIGQAASMGALLLTAGTKGKRFALPNSRIMI 122
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQP GG GQA D+ I +I+R+ D LN + HTGQ IE + + +RD+FM+ EA +
Sbjct: 123 HQPLGGTQGQATDIKIQANEILRMKDILNEILSTHTGQDIEKVSADTERDFFMSATEAMK 182
Query: 214 FGIIDEVIDQR 224
+GI+D+V+ R
Sbjct: 183 YGIVDKVVTDR 193
>gi|256544468|ref|ZP_05471841.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Anaerococcus
vaginalis ATCC 51170]
gi|256399793|gb|EEU13397.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Anaerococcus
vaginalis ATCC 51170]
Length = 195
Score = 253 bits (646), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 116/196 (59%), Positives = 158/196 (80%), Gaps = 1/196 (0%)
Query: 27 ISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESEN 86
++A++F L+P VIE ++RGERAYDI+SRLLK+RII + GP+ D + +++AQLLFLES++
Sbjct: 1 MNAKNF-LVPTVIEQTNRGERAYDIYSRLLKDRIIFLTGPVEDGVSDIIIAQLLFLESQD 59
Query: 87 PSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRAL 146
P+K I Y+NSPGG VTAGLAIYDTM YI+ ++TIC+GQAASMG++LL+SG KG+R +L
Sbjct: 60 PNKDIQFYINSPGGVVTAGLAIYDTMNYIKPDVSTICIGQAASMGAVLLSSGAKGKRFSL 119
Query: 147 PNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFM 206
PNS I+IHQPSGG GQA D+ I +QI+++ LN + +TGQSIE IQK+ DRD+ M
Sbjct: 120 PNSNILIHQPSGGAQGQASDIQIQAEQILKMKKRLNKILADNTGQSIEKIQKDTDRDFAM 179
Query: 207 TPEEAKEFGIIDEVID 222
EAKE+G+ID+VI+
Sbjct: 180 DAYEAKEYGLIDKVIE 195
>gi|127513436|ref|YP_001094633.1| ATP-dependent Clp protease proteolytic subunit [Shewanella loihica
PV-4]
gi|171855248|sp|A3QFX6.1|CLPP_SHELP RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|126638731|gb|ABO24374.1| ATP-dependent Clp protease proteolytic subunit ClpP [Shewanella
loihica PV-4]
Length = 203
Score = 253 bits (646), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 108/192 (56%), Positives = 155/192 (80%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E +++GER+YDI+SRLLKER+I + G + + A+++VAQLLFLESE+P K I+
Sbjct: 11 ALVPMVVEQTAKGERSYDIYSRLLKERVIFLVGQVEEHMANLIVAQLLFLESESPDKDIY 70
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
+Y+NSPGG VTAG+AIYDTMQ+I+ ++T+C+GQAASMG+ LLA G KG+R LPNS +M
Sbjct: 71 LYINSPGGSVTAGMAIYDTMQFIKPNVSTVCIGQAASMGAFLLAGGAKGKRHCLPNSRVM 130
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQP GG+ GQA D+ IH ++I+ + + LN + HTGQ +EVI+++ DRD FM+ EA
Sbjct: 131 IHQPLGGFQGQASDIAIHAQEILGIKNKLNQMLADHTGQPLEVIERDTDRDNFMSATEAA 190
Query: 213 EFGIIDEVIDQR 224
E+G++D V+D+R
Sbjct: 191 EYGLVDSVLDKR 202
>gi|91228617|ref|ZP_01262535.1| ATP-dependent Clp protease proteolytic subunit [Vibrio
alginolyticus 12G01]
gi|254229904|ref|ZP_04923307.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio sp.
Ex25]
gi|262394815|ref|YP_003286669.1| ATP-dependent Clp protease proteolytic subunit [Vibrio sp. Ex25]
gi|269965580|ref|ZP_06179694.1| ATP-dependent Clp protease proteolytic subunit [Vibrio
alginolyticus 40B]
gi|451970181|ref|ZP_21923408.1| ATP-dependent Clp protease proteolytic subunit [Vibrio
alginolyticus E0666]
gi|91187849|gb|EAS74163.1| ATP-dependent Clp protease proteolytic subunit [Vibrio
alginolyticus 12G01]
gi|151937540|gb|EDN56395.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio sp.
Ex25]
gi|262338409|gb|ACY52204.1| ATP-dependent Clp protease proteolytic subunit [Vibrio sp. Ex25]
gi|269829805|gb|EEZ84040.1| ATP-dependent Clp protease proteolytic subunit [Vibrio
alginolyticus 40B]
gi|451933695|gb|EMD81362.1| ATP-dependent Clp protease proteolytic subunit [Vibrio
alginolyticus E0666]
Length = 208
Score = 253 bits (646), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 111/192 (57%), Positives = 151/192 (78%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E +SRGER+YDI+SRLLKER+I + G + D A++VVAQLLFLESENP K I
Sbjct: 15 ALVPMVVEQTSRGERSYDIYSRLLKERVIFLTGQVEDHMANLVVAQLLFLESENPDKDIF 74
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
+Y+NSPGG VTAG++IYDTMQ+I+ ++T+C+GQA SMG+ LLA G G+R LPNS +M
Sbjct: 75 LYINSPGGSVTAGMSIYDTMQFIKPNVSTVCMGQACSMGAFLLAGGAPGKRYVLPNSRVM 134
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQP GG+ GQA D+ IH ++I+ + LN L +HTGQ +EVI+++ DRD FM+ E+A
Sbjct: 135 IHQPLGGFQGQASDIQIHAQEILTIKQKLNKLLAEHTGQPLEVIERDTDRDNFMSSEQAV 194
Query: 213 EFGIIDEVIDQR 224
E+GI+D V+ R
Sbjct: 195 EYGIVDAVLSHR 206
>gi|253681101|ref|ZP_04861904.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
botulinum D str. 1873]
gi|331270305|ref|YP_004396797.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
botulinum BKT015925]
gi|416350488|ref|ZP_11680890.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
botulinum C str. Stockholm]
gi|253562950|gb|EES92396.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
botulinum D str. 1873]
gi|329126855|gb|AEB76800.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
botulinum BKT015925]
gi|338196268|gb|EGO88472.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
botulinum C str. Stockholm]
Length = 195
Score = 253 bits (646), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 112/192 (58%), Positives = 156/192 (81%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
SL+P+V+E ++RGER+YDI+SRLLK+RII + +ND +A +VVAQLLFLE+E+P K I+
Sbjct: 2 SLVPVVVEQTNRGERSYDIYSRLLKDRIIFLGEEVNDVSASLVVAQLLFLEAEDPDKDIY 61
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
+Y+NSPGG +TAG+AIYDTMQYI+ ++TIC+G AASMG+ LL +G KG+R ALPNS IM
Sbjct: 62 LYINSPGGSITAGMAIYDTMQYIKPDVSTICIGMAASMGAFLLTAGAKGKRFALPNSEIM 121
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQP GG+ GQA D+ IH +I+++ D LN + + TG+ +EVI+K+++RD FM +EAK
Sbjct: 122 IHQPLGGFQGQATDIGIHANRILKIKDKLNKILSERTGKPLEVIKKDVERDNFMEADEAK 181
Query: 213 EFGIIDEVIDQR 224
E+G+ID+VI R
Sbjct: 182 EYGLIDDVITSR 193
>gi|110816466|sp|Q2NV79.2|CLPP_SODGM RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
Length = 194
Score = 253 bits (646), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 108/192 (56%), Positives = 155/192 (80%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E +SRGER+YDIFSRLLKERII + G + D A+++VAQ++FLE+ENP K I+
Sbjct: 2 ALVPMVVEQTSRGERSYDIFSRLLKERIIFMTGQVEDHMANLIVAQMMFLEAENPEKDIY 61
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
+Y+NSPGG +TAG++IYDTMQ+I+ ++T C+GQAASMG+ LLA+G KG+R LPNS +M
Sbjct: 62 LYINSPGGVITAGMSIYDTMQFIKPDVSTFCMGQAASMGAFLLAAGAKGKRFCLPNSRVM 121
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQP GG+ GQA D+ IH ++I++V +N L KHTGQ +EVI+++ +RD F++ EA
Sbjct: 122 IHQPLGGFQGQATDIEIHAREILKVKARMNELMAKHTGQPLEVIERDTERDRFLSAPEAV 181
Query: 213 EFGIIDEVIDQR 224
++G++D V+ QR
Sbjct: 182 DYGLVDSVLSQR 193
>gi|410693928|ref|YP_003624550.1| ATP-dependent Clp protease proteolytic subunit precursor
(Endopeptidase Clp) (Caseinolytic protease) (Protease
Ti) (Heat shock protein F21.5) [Thiomonas sp. 3As]
gi|294340353|emb|CAZ88734.1| ATP-dependent Clp protease proteolytic subunit precursor
(Endopeptidase Clp) (Caseinolytic protease) (Protease
Ti) (Heat shock protein F21.5) [Thiomonas sp. 3As]
Length = 202
Score = 253 bits (646), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 113/195 (57%), Positives = 156/195 (80%)
Query: 30 RSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSK 89
++ L+PMVIE S RGERAYDI+SRLL+ER+I + GPIND A++VVAQLLFLESENP K
Sbjct: 7 QNLGLVPMVIEQSGRGERAYDIYSRLLRERVIFLVGPINDQMANLVVAQLLFLESENPDK 66
Query: 90 PIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNS 149
I +Y+NSPGG V+AG+AI+DTMQ+I+ ++T+C G AASMG+ L+A+G KG+R +LPNS
Sbjct: 67 DISLYINSPGGSVSAGMAIFDTMQFIKPDVSTLCTGIAASMGAFLMAAGAKGKRYSLPNS 126
Query: 150 TIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPE 209
IMIHQPSGG GQA D+ I ++I+ + + LN + + TGQ++E I + +RD+FM+ +
Sbjct: 127 RIMIHQPSGGAQGQATDIEIQAREILYLRERLNGILAERTGQTLEKIGIDTERDFFMSAD 186
Query: 210 EAKEFGIIDEVIDQR 224
EAK++G+IDEVI +R
Sbjct: 187 EAKDYGLIDEVISKR 201
>gi|117926916|ref|YP_867533.1| ATP-dependent Clp protease proteolytic subunit ClpP [Magnetococcus
marinus MC-1]
gi|254763794|sp|A0LDT4.1|CLPP_MAGSM RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|117610672|gb|ABK46127.1| ATP-dependent Clp protease proteolytic subunit ClpP [Magnetococcus
marinus MC-1]
Length = 202
Score = 253 bits (646), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 110/195 (56%), Positives = 155/195 (79%)
Query: 32 FSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPI 91
SL+PMV+E ++RGERAYDI+SRLLKER++ + G + + A++VVAQLLFLESENP K I
Sbjct: 1 MSLVPMVVETTNRGERAYDIYSRLLKERVVFLVGQVEEHMANLVVAQLLFLESENPEKDI 60
Query: 92 HMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTI 151
H+Y+NSPGG VTAG+AIYDTMQ+IR ++T+C+GQAASMG++LLA+G G+R LPN+ +
Sbjct: 61 HLYINSPGGSVTAGMAIYDTMQFIRPSVSTLCIGQAASMGAVLLAAGEAGKRLVLPNARV 120
Query: 152 MIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEA 211
MIHQP GG+SGQA D IH ++I+R+ + LN + HTG+ +E +Q + +RD F++ EA
Sbjct: 121 MIHQPLGGFSGQASDFEIHAREILRIRENLNQVLSHHTGKPLEQVQLDTERDNFLSATEA 180
Query: 212 KEFGIIDEVIDQRPM 226
E+G++D+VI R +
Sbjct: 181 VEYGLVDKVISHREL 195
>gi|224824981|ref|ZP_03698087.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Pseudogulbenkiania ferrooxidans 2002]
gi|347540404|ref|YP_004847829.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Pseudogulbenkiania sp. NH8B]
gi|224602652|gb|EEG08829.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Pseudogulbenkiania ferrooxidans 2002]
gi|345643582|dbj|BAK77415.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Pseudogulbenkiania sp. NH8B]
Length = 207
Score = 253 bits (646), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 112/200 (56%), Positives = 156/200 (78%)
Query: 25 AQISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLES 84
+ + ++ L+PMV+E S RGERAYDI+SRLLKERI+ + GP+ D++A++VVAQ+LFLES
Sbjct: 3 SMMDTQALGLVPMVVEQSGRGERAYDIYSRLLKERIVFLVGPVTDESANLVVAQMLFLES 62
Query: 85 ENPSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERR 144
ENP K I+ Y+NSPGG V+AG++I+DTM +I+ ++T+C+GQAASMG+ LL++G KG+R
Sbjct: 63 ENPDKDIYFYINSPGGSVSAGMSIFDTMNFIKPDVSTLCIGQAASMGAFLLSAGAKGKRF 122
Query: 145 ALPNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDY 204
ALPNS IMIHQP GG+ GQA D IH K I+ + LN L HTG+SIE I+++ DRD
Sbjct: 123 ALPNSRIMIHQPLGGFQGQASDFEIHAKNILYMKRRLNELLALHTGRSIEEIERDTDRDN 182
Query: 205 FMTPEEAKEFGIIDEVIDQR 224
FM+ EEA +G+ID+++ R
Sbjct: 183 FMSSEEALAYGLIDKMLQSR 202
>gi|313887837|ref|ZP_07821517.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Peptoniphilus harei ACS-146-V-Sch2b]
gi|312846180|gb|EFR33561.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Peptoniphilus harei ACS-146-V-Sch2b]
Length = 194
Score = 253 bits (646), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 111/193 (57%), Positives = 157/193 (81%)
Query: 32 FSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPI 91
+L+PMV+E ++RGER+YDI+SRLLK+RII ++G +ND A ++VAQLLFLE+E+P+K I
Sbjct: 1 MALVPMVVEQTNRGERSYDIYSRLLKDRIIFLSGEVNDTMADLIVAQLLFLEAEDPNKDI 60
Query: 92 HMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTI 151
+Y+NSPGG V+AG AIYDTM YI+ ++TIC+G AASMG+ LLASG KG+R ALPNS I
Sbjct: 61 QLYINSPGGSVSAGFAIYDTMNYIKPDVSTICIGMAASMGAFLLASGAKGKRFALPNSDI 120
Query: 152 MIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEA 211
MIHQPSGG GQA D+ I+ ++I+++ LN + + TGQ +E I+K+ DRDY++ +EA
Sbjct: 121 MIHQPSGGAQGQASDIQINAEKILKIRHKLNEILAERTGQDLEKIEKDTDRDYWLNSQEA 180
Query: 212 KEFGIIDEVIDQR 224
K++G+ID+VI++R
Sbjct: 181 KDYGLIDKVIEKR 193
>gi|330446593|ref|ZP_08310245.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
gi|328490784|dbj|GAA04742.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
Length = 207
Score = 253 bits (645), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 109/192 (56%), Positives = 153/192 (79%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E +SRGER+YDI+SRLLKER+I + G + D A++VVAQLLFLESENP K I
Sbjct: 15 ALVPMVVEQTSRGERSYDIYSRLLKERVIFLTGQVEDHMANLVVAQLLFLESENPDKDIF 74
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
+Y+NSPGG VTAG++IYDTMQ+I+ ++T+C+GQA SMG+ LLA G KG+R LPNS +M
Sbjct: 75 LYINSPGGSVTAGMSIYDTMQFIKPNVSTVCMGQACSMGAFLLAGGAKGKRYCLPNSRVM 134
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQP GG+ GQA D+ IH ++I+ + LN L +HTGQ +E+I+++ DRD FM+ ++A
Sbjct: 135 IHQPLGGFQGQASDIQIHAQEILTIKQRLNGLLAEHTGQPLEIIERDTDRDNFMSADQAV 194
Query: 213 EFGIIDEVIDQR 224
E+G++D V+ +R
Sbjct: 195 EYGLVDAVLSKR 206
>gi|187928950|ref|YP_001899437.1| ATP-dependent Clp protease proteolytic subunit [Ralstonia pickettii
12J]
gi|241663134|ref|YP_002981494.1| ATP-dependent Clp protease proteolytic subunit [Ralstonia pickettii
12D]
gi|309781948|ref|ZP_07676679.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Ralstonia sp.
5_7_47FAA]
gi|404377636|ref|ZP_10982736.1| ATP-dependent Clp protease proteolytic subunit [Ralstonia sp.
5_2_56FAA]
gi|187725840|gb|ACD27005.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Ralstonia
pickettii 12J]
gi|240865161|gb|ACS62822.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Ralstonia
pickettii 12D]
gi|308919292|gb|EFP64958.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Ralstonia sp.
5_7_47FAA]
gi|348611501|gb|EGY61146.1| ATP-dependent Clp protease proteolytic subunit [Ralstonia sp.
5_2_56FAA]
Length = 215
Score = 253 bits (645), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 116/207 (56%), Positives = 160/207 (77%), Gaps = 1/207 (0%)
Query: 19 QLSKPSAQ-ISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVA 77
QL++ A + + L+PMV+E S RGERAYDI+SRLLKER+I + G +ND TA++VVA
Sbjct: 9 QLARTQASALETQGLGLVPMVVEQSGRGERAYDIYSRLLKERVIFMVGEVNDQTANLVVA 68
Query: 78 QLLFLESENPSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLAS 137
QLLFLESENP K I +Y+NSPGG V++GLA+YDTMQ+I+ ++T+C+G AASMG+ LLA+
Sbjct: 69 QLLFLESENPDKDISLYINSPGGSVSSGLAMYDTMQFIKPDVSTLCMGMAASMGAFLLAA 128
Query: 138 GTKGERRALPNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQ 197
G KG+R ALPNS IMIHQP GG GQA D+ I ++I+ + + LN + + TGQ ++ I
Sbjct: 129 GAKGKRLALPNSRIMIHQPLGGARGQASDIEIQAREILYLRERLNTVLSEVTGQPVDKIA 188
Query: 198 KNMDRDYFMTPEEAKEFGIIDEVIDQR 224
++ DRD FM+ E+AKE+G+ID+VI +R
Sbjct: 189 RDTDRDNFMSSEQAKEYGLIDQVIAKR 215
>gi|262374981|ref|ZP_06068215.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Acinetobacter
lwoffii SH145]
gi|262309994|gb|EEY91123.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Acinetobacter
lwoffii SH145]
Length = 201
Score = 253 bits (645), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 108/193 (55%), Positives = 155/193 (80%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E SSRGER++DI+SRLL+ER+I + G + D+ A+++VAQ+LFLE+ENP K IH
Sbjct: 9 ALVPMVVEQSSRGERSFDIYSRLLRERVIFMTGEVEDNMANLIVAQMLFLEAENPDKDIH 68
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
+Y+NSPGG VTAG+AIYDTMQ+I+ + T C+GQAASMG+ LL +GTKG+R L N+ +M
Sbjct: 69 LYINSPGGSVTAGMAIYDTMQFIKPDVVTYCMGQAASMGAFLLNAGTKGKRYCLENARVM 128
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQP GG+ GQA D+ IH ++I+ + + LN L +H+GQ E + ++ DRD FMT ++AK
Sbjct: 129 IHQPLGGFRGQASDIEIHAREILFIKERLNRLMAEHSGQDYEKVARDTDRDNFMTAQQAK 188
Query: 213 EFGIIDEVIDQRP 225
E+G++DEV+ +RP
Sbjct: 189 EYGLVDEVLTKRP 201
>gi|28897691|ref|NP_797296.1| ATP-dependent Clp protease proteolytic subunit [Vibrio
parahaemolyticus RIMD 2210633]
gi|260898290|ref|ZP_05906786.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
parahaemolyticus Peru-466]
gi|308094762|ref|ZP_05891792.2| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
parahaemolyticus AN-5034]
gi|31340006|sp|Q87R80.1|CLPP_VIBPA RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|28805904|dbj|BAC59180.1| ATP-dependent Clp protease, proteolytic subunit [Vibrio
parahaemolyticus RIMD 2210633]
gi|308088425|gb|EFO38120.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
parahaemolyticus Peru-466]
gi|308093191|gb|EFO42886.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
parahaemolyticus AN-5034]
Length = 200
Score = 253 bits (645), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 111/192 (57%), Positives = 151/192 (78%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E +SRGER+YDI+SRLLKER+I + G + D A++VVAQLLFLESENP K I
Sbjct: 7 ALVPMVVEQTSRGERSYDIYSRLLKERVIFLTGQVEDHMANLVVAQLLFLESENPDKDIF 66
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
+Y+NSPGG VTAG++IYDTMQ+I+ ++T+C+GQA SMG+ LLA G G+R LPNS +M
Sbjct: 67 LYINSPGGSVTAGMSIYDTMQFIKPNVSTVCMGQACSMGAFLLAGGAAGKRYVLPNSRVM 126
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQP GG+ GQA D+ IH ++I+ + LN L +HTGQ +EVI+++ DRD FM+ E+A
Sbjct: 127 IHQPLGGFQGQASDIQIHAQEILTIKQKLNNLLAEHTGQPLEVIERDTDRDNFMSAEQAV 186
Query: 213 EFGIIDEVIDQR 224
E+GI+D V+ R
Sbjct: 187 EYGIVDAVLSHR 198
>gi|154249786|ref|YP_001410611.1| ATP-dependent Clp protease proteolytic subunit [Fervidobacterium
nodosum Rt17-B1]
gi|154153722|gb|ABS60954.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Fervidobacterium nodosum Rt17-B1]
Length = 206
Score = 253 bits (645), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 117/187 (62%), Positives = 151/187 (80%)
Query: 35 IPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHMY 94
+P+VIE + R ERAYDI+SRLLK+RII + I+D A++VVAQLLFLE+ENP K I +Y
Sbjct: 15 VPIVIESTGRYERAYDIYSRLLKDRIIFLGSAIDDHVANLVVAQLLFLEAENPDKDIQLY 74
Query: 95 LNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMIH 154
+NSPGG VTAGLAIYDTMQY++ + TIC+GQAASMG++LLA+G KG+R ALPNS IMIH
Sbjct: 75 INSPGGLVTAGLAIYDTMQYVKCDVATICVGQAASMGAVLLAAGAKGKRFALPNSRIMIH 134
Query: 155 QPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKEF 214
QP GG G AKD+ I TK+++R+ +N + KHTGQ IE I+K+ DRD+FM+ +EA E+
Sbjct: 135 QPLGGAEGSAKDVEILTKELLRIKRIINEILSKHTGQDIERIEKDTDRDFFMSAQEAMEY 194
Query: 215 GIIDEVI 221
GIID+VI
Sbjct: 195 GIIDKVI 201
>gi|198433849|ref|XP_002124509.1| PREDICTED: similar to predicted protein isoform 1 [Ciona
intestinalis]
Length = 234
Score = 253 bits (645), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 118/207 (57%), Positives = 155/207 (74%), Gaps = 9/207 (4%)
Query: 25 AQISARSFSL---------IPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVV 75
++I +R F + +P VIE + RGER YDI+SRLLKERI+C+ P++D + ++
Sbjct: 19 SEICSRCFHISKNNLQPLGVPFVIEQTGRGERTYDIYSRLLKERIVCLMAPVDDFVSGLI 78
Query: 76 VAQLLFLESENPSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLL 135
VAQLLFL+SE+P KPI+MY+N+PGG VT+GLAIYDTMQ I+ P++T +GQA+SMGSLLL
Sbjct: 79 VAQLLFLQSESPQKPINMYINTPGGTVTSGLAIYDTMQLIKCPVSTWVVGQASSMGSLLL 138
Query: 136 ASGTKGERRALPNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEV 195
A+G G R ALPNS IM+HQP GG SGQA D+ I +I +V + LN LY +HTGQ EV
Sbjct: 139 AAGEPGMRNALPNSRIMVHQPLGGASGQASDIVIQANEIKKVKEKLNKLYVQHTGQEYEV 198
Query: 196 IQKNMDRDYFMTPEEAKEFGIIDEVID 222
I+K +DRD FM P EAK FG+ID V++
Sbjct: 199 IEKALDRDNFMDPYEAKLFGLIDNVLE 225
>gi|407007733|gb|EKE23312.1| hypothetical protein ACD_6C00528G0009 [uncultured bacterium]
Length = 201
Score = 253 bits (645), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 108/193 (55%), Positives = 155/193 (80%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E SSRGER++DI+SRLL+ER+I + G + D+ A+++VAQ+LFLE+ENP K IH
Sbjct: 9 ALVPMVVEQSSRGERSFDIYSRLLRERVIFMTGEVEDNMANLIVAQMLFLEAENPDKDIH 68
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
+Y+NSPGG VTAG+AIYDTMQ+I+ + T C+GQAASMG+ LL +GTKG+R L N+ +M
Sbjct: 69 LYINSPGGSVTAGMAIYDTMQFIKPDVVTYCMGQAASMGAFLLNAGTKGKRYCLENARVM 128
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQP GG+ GQA D+ IH ++I+ + + LN L +H+GQ E + ++ DRD FMT ++AK
Sbjct: 129 IHQPLGGFRGQASDIEIHAREILFIKERLNRLMAEHSGQDYEKVARDTDRDNFMTAQQAK 188
Query: 213 EFGIIDEVIDQRP 225
E+G++DEV+ +RP
Sbjct: 189 EYGLVDEVLTKRP 201
>gi|386012908|ref|YP_005931185.1| protein ClpP [Pseudomonas putida BIRD-1]
gi|397698114|ref|YP_006535997.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas putida
DOT-T1E]
gi|313499614|gb|ADR60980.1| ClpP [Pseudomonas putida BIRD-1]
gi|397334844|gb|AFO51203.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas putida
DOT-T1E]
Length = 192
Score = 253 bits (645), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 113/191 (59%), Positives = 150/191 (78%)
Query: 37 MVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHMYLN 96
MVIE S+RGERAYDI+SRLLKER+I + GP+ D A++VVAQLLFLE+ENP K IH+Y+N
Sbjct: 1 MVIEQSARGERAYDIYSRLLKERVIFLVGPVEDYMANLVVAQLLFLEAENPDKDIHLYIN 60
Query: 97 SPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMIHQP 156
SPGG VTAG++IYDTMQ+I+ ++TIC+GQA SMG+ LLA+G KG+R LPNS +MIHQP
Sbjct: 61 SPGGSVTAGMSIYDTMQFIKPDVSTICIGQACSMGAFLLAAGAKGKRHCLPNSRVMIHQP 120
Query: 157 SGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKEFGI 216
GG+ GQA D+ IH ++I+ + LN L HTGQ +E I+++ +RD FM+ A E+G+
Sbjct: 121 LGGFQGQATDIEIHAQEILNIKARLNELLAYHTGQDLETIKRDTERDNFMSASRAAEYGL 180
Query: 217 IDEVIDQRPMA 227
ID V D+R +A
Sbjct: 181 IDSVYDKRQLA 191
>gi|417862116|ref|ZP_12507169.1| ATP-dependent Clp protease proteolytic subunit [Agrobacterium
tumefaciens F2]
gi|338820520|gb|EGP54491.1| ATP-dependent Clp protease proteolytic subunit [Agrobacterium
tumefaciens F2]
Length = 198
Score = 253 bits (645), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 113/198 (57%), Positives = 152/198 (76%)
Query: 37 MVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHMYLN 96
MVIE SSRGER++DI+SRLL+ERII +NG +ND + +V AQLLFLE+ENP KPI +Y+N
Sbjct: 1 MVIEQSSRGERSFDIYSRLLRERIIFLNGEVNDTVSALVCAQLLFLEAENPKKPIQLYIN 60
Query: 97 SPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMIHQP 156
SPGG VT+GLA+YDTM+YIR+P++T+C+G A SMGS LL +G GER ALPN++I+IHQP
Sbjct: 61 SPGGVVTSGLAMYDTMRYIRAPVHTLCMGTARSMGSFLLMAGEPGERAALPNASILIHQP 120
Query: 157 SGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKEFGI 216
SGG+ GQA DM IH ++I++ + LY +H +S E ++ MDRD FMT EEA E+G+
Sbjct: 121 SGGFQGQASDMLIHAEEILKTKQRMTRLYAEHCKRSYEEFEQAMDRDRFMTVEEALEWGL 180
Query: 217 IDEVIDQRPMALVTDAVG 234
ID V+ +R ++ G
Sbjct: 181 IDRVLTERETGAASEVAG 198
>gi|397905705|ref|ZP_10506547.1| ATP-dependent Clp protease proteolytic subunit [Caloramator
australicus RC3]
gi|397161224|emb|CCJ33882.1| ATP-dependent Clp protease proteolytic subunit [Caloramator
australicus RC3]
Length = 196
Score = 253 bits (645), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 116/193 (60%), Positives = 155/193 (80%)
Query: 32 FSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPI 91
SL+P+V+E ++RGER+YDI+SRLLKERII + IND TA++V+AQLLFLESE+P K I
Sbjct: 1 MSLVPIVVEQTARGERSYDIYSRLLKERIIFLGDEINDQTANLVIAQLLFLESEDPDKDI 60
Query: 92 HMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTI 151
++Y+NSPGG ++AGLAIYDTMQYI+ ++TIC+G AASM ++LLA+G KG+R ALPNS I
Sbjct: 61 YLYINSPGGVISAGLAIYDTMQYIKPDVSTICVGMAASMAAVLLAAGAKGKRFALPNSEI 120
Query: 152 MIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEA 211
MIHQP GG GQA D+ IH + I+++ LN + + TGQ IE I+K+ DRD FMT EA
Sbjct: 121 MIHQPLGGARGQATDIAIHAEHILKLKKRLNEILSERTGQPIERIEKDTDRDNFMTALEA 180
Query: 212 KEFGIIDEVIDQR 224
KE+G+ID+VI ++
Sbjct: 181 KEYGLIDDVITKK 193
>gi|374295111|ref|YP_005045302.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
clariflavum DSM 19732]
gi|359824605|gb|AEV67378.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
clariflavum DSM 19732]
Length = 194
Score = 253 bits (645), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 112/192 (58%), Positives = 153/192 (79%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
SL+P+V+E ++RGER+YDIFSRLLK+RII ++ IND TA +VVAQ+LFLE+E+P K I
Sbjct: 2 SLVPIVVEQTNRGERSYDIFSRLLKDRIIVLSDEINDATASLVVAQMLFLEAEDPDKDIQ 61
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
+Y+NSPGG V+AG AIYDTMQY++ ++TIC+G AASMG+ LLA+G KG+R ALPNS IM
Sbjct: 62 LYINSPGGSVSAGFAIYDTMQYVKPDVSTICIGMAASMGAFLLAAGAKGKRFALPNSEIM 121
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQP GG GQA D+ IH I++ + LN + + TGQ +E IQ + +RD+FM+ EEAK
Sbjct: 122 IHQPLGGARGQATDIKIHADHIIKTRERLNRILSERTGQPLERIQADTERDFFMSAEEAK 181
Query: 213 EFGIIDEVIDQR 224
+G++DEV+++R
Sbjct: 182 AYGLVDEVMERR 193
>gi|126727090|ref|ZP_01742927.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Rhodobacterales bacterium HTCC2150]
gi|126703518|gb|EBA02614.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Rhodobacterales bacterium HTCC2150]
Length = 209
Score = 253 bits (645), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 113/192 (58%), Positives = 153/192 (79%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
+IP V E +SRG YDIFSRLLKERII ++GP++D+ A +VAQLLFLE++NP+K I M
Sbjct: 12 VIPTVEETTSRGSIRYDIFSRLLKERIIFVSGPVHDEMATTIVAQLLFLEADNPTKEIAM 71
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VT+GL+IYDTMQYI+ ++T+C+GQAASMGSLLLA+G G R +LPNS IM+
Sbjct: 72 YINSPGGVVTSGLSIYDTMQYIKPKVSTVCIGQAASMGSLLLAAGEPGMRYSLPNSRIMV 131
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQPSGGY GQA D+ IH + ++ D LN +Y KHTGQ+++ + ++RD FM+ EEAK
Sbjct: 132 HQPSGGYQGQATDIMIHAAETQKLKDRLNGIYVKHTGQTMKKVVDGLERDNFMSAEEAKS 191
Query: 214 FGIIDEVIDQRP 225
+G++DE+++ RP
Sbjct: 192 WGLVDEIVENRP 203
>gi|392395333|ref|YP_006431935.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Desulfitobacterium dehalogenans ATCC 51507]
gi|390526411|gb|AFM02142.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Desulfitobacterium dehalogenans ATCC 51507]
Length = 202
Score = 253 bits (645), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 113/193 (58%), Positives = 156/193 (80%), Gaps = 3/193 (1%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
L+PMVIE ++RGER+YDI+SRLLK+RII + GP+ DD A+++VAQ+LFLE+E+P K I +
Sbjct: 4 LVPMVIEQTNRGERSYDIYSRLLKDRIIFLGGPVTDDVANLIVAQMLFLEAEDPEKDIFL 63
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG ++AG+AIYDTMQYIRS ++TIC+G AASMG+ LL +G KG+R ALPN+ I+I
Sbjct: 64 YINSPGGSISAGMAIYDTMQYIRSDVHTICVGLAASMGAFLLTAGAKGKRSALPNAEILI 123
Query: 154 HQP---SGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEE 210
HQP GG SGQA ++ IH K ++RV + +N + + TGQ+IE I+ + DRD +MT EE
Sbjct: 124 HQPLIGGGGISGQATEIEIHAKHLLRVKERMNRILAERTGQTIERIEADTDRDRYMTAEE 183
Query: 211 AKEFGIIDEVIDQ 223
AKE+G+IDEV ++
Sbjct: 184 AKEYGLIDEVFEK 196
>gi|347819079|ref|ZP_08872513.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Verminephrobacter aporrectodeae subsp. tuberculatae
At4]
Length = 202
Score = 253 bits (645), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 109/198 (55%), Positives = 156/198 (78%)
Query: 27 ISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESEN 86
+ + LIPMVIE S RGER+YDI+SRLLKER+I + GP+ND TA++VVAQLLFLESEN
Sbjct: 4 LDTQGLGLIPMVIEQSGRGERSYDIYSRLLKERVIFLVGPVNDQTANLVVAQLLFLESEN 63
Query: 87 PSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRAL 146
P K I Y+NSPGG V++G+AI+DTM +I+ ++T+C G AASMG+ LLA+G +G+R AL
Sbjct: 64 PDKDISFYINSPGGSVSSGMAIFDTMNFIKPDVSTLCTGMAASMGAFLLAAGAQGKRFAL 123
Query: 147 PNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFM 206
PNS +MIHQP GG GQA ++ IH ++I++ + LN + + TGQ +E IQ++ +RDYF+
Sbjct: 124 PNSKVMIHQPLGGMQGQATEIEIHAREILKTREQLNKILAERTGQPLEKIQRDTERDYFL 183
Query: 207 TPEEAKEFGIIDEVIDQR 224
+ +E++E+G++D+VI +R
Sbjct: 184 SADESREYGLVDQVISKR 201
>gi|218510664|ref|ZP_03508542.1| ATP-dependent Clp protease proteolytic subunit [Rhizobium etli
Brasil 5]
gi|417100000|ref|ZP_11959987.1| ATP-dependent Clp protease proteolytic subunit [Rhizobium etli
CNPAF512]
gi|327192437|gb|EGE59394.1| ATP-dependent Clp protease proteolytic subunit [Rhizobium etli
CNPAF512]
Length = 203
Score = 253 bits (645), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 112/194 (57%), Positives = 153/194 (78%)
Query: 31 SFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKP 90
+ L+PMVIE SSRGER++DI+SRLL+ERII +NG +ND + +V AQLLFLE+ENP+KP
Sbjct: 4 AMQLVPMVIEQSSRGERSFDIYSRLLRERIIFLNGEVNDTVSALVCAQLLFLEAENPNKP 63
Query: 91 IHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNST 150
I++Y+NSPGG VT+GLA+YDTM++IR+P++T+C+G A SMGS LL +G G R ALPN++
Sbjct: 64 INLYINSPGGVVTSGLAMYDTMRFIRAPVHTLCMGTARSMGSFLLMAGEPGGRAALPNAS 123
Query: 151 IMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEE 210
I+IHQPSGG+ GQA DM IH ++I++ + LY +H G+S E + MDRD FMT EE
Sbjct: 124 ILIHQPSGGFQGQASDMLIHAEEILKTKQRMTRLYAEHCGRSYEDFEHGMDRDRFMTAEE 183
Query: 211 AKEFGIIDEVIDQR 224
A E+G+ID ++ R
Sbjct: 184 ALEWGLIDRILKVR 197
>gi|254670503|emb|CBA06249.1| ATP-dependent Clp protease, proteolytic subunit [Neisseria
meningitidis alpha153]
Length = 209
Score = 253 bits (645), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 113/193 (58%), Positives = 155/193 (80%), Gaps = 2/193 (1%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
L+P VIE S RGERA+DI+SRLLKERI+ + GP+ D++A++VVAQLLFLESENP K I
Sbjct: 12 LVPTVIEQSGRGERAFDIYSRLLKERIVFLVGPVTDESANLVVAQLLFLESENPDKDIFF 71
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VTAG++IYDTM +I+ ++T+CLGQAASMG+ LL++G KG+R ALPNS IMI
Sbjct: 72 YINSPGGSVTAGMSIYDTMNFIKPDVSTLCLGQAASMGAFLLSAGEKGKRFALPNSRIMI 131
Query: 154 HQP--SGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEA 211
HQP SGG GQA D+ IH ++++++ + LN L KH G+ + ++++ DRD FM+ EEA
Sbjct: 132 HQPLISGGLGGQASDIEIHARELLKIKEKLNRLMAKHCGRDLADLERDTDRDNFMSAEEA 191
Query: 212 KEFGIIDEVIDQR 224
KE+G+ID+V++ R
Sbjct: 192 KEYGLIDQVLENR 204
>gi|85058649|ref|YP_454351.1| ATP-dependent Clp protease proteolytic subunit [Sodalis
glossinidius str. 'morsitans']
gi|84779169|dbj|BAE73946.1| ATP-dependent Clp protease proteolytic subunit [Sodalis
glossinidius str. 'morsitans']
Length = 207
Score = 253 bits (645), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 109/196 (55%), Positives = 156/196 (79%)
Query: 29 ARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPS 88
A +L+PMV+E +SRGER+YDIFSRLLKERII + G + D A+++VAQ++FLE+ENP
Sbjct: 11 APHMALVPMVVEQTSRGERSYDIFSRLLKERIIFMTGQVEDHMANLIVAQMMFLEAENPE 70
Query: 89 KPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPN 148
K I++Y+NSPGG +TAG++IYDTMQ+I+ ++T C+GQAASMG+ LLA+G KG+R LPN
Sbjct: 71 KDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTFCMGQAASMGAFLLAAGAKGKRFCLPN 130
Query: 149 STIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTP 208
S +MIHQP GG+ GQA D+ IH ++I++V +N L KHTGQ +EVI+++ +RD F++
Sbjct: 131 SRVMIHQPLGGFQGQATDIEIHAREILKVKARMNELMAKHTGQPLEVIERDTERDRFLSA 190
Query: 209 EEAKEFGIIDEVIDQR 224
EA ++G++D V+ QR
Sbjct: 191 PEAVDYGLVDSVLSQR 206
>gi|212696598|ref|ZP_03304726.1| hypothetical protein ANHYDRO_01138 [Anaerococcus hydrogenalis DSM
7454]
gi|325847156|ref|ZP_08169955.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Anaerococcus hydrogenalis ACS-025-V-Sch4]
gi|212676329|gb|EEB35936.1| hypothetical protein ANHYDRO_01138 [Anaerococcus hydrogenalis DSM
7454]
gi|325480936|gb|EGC83982.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Anaerococcus hydrogenalis ACS-025-V-Sch4]
Length = 195
Score = 253 bits (645), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 115/196 (58%), Positives = 158/196 (80%), Gaps = 1/196 (0%)
Query: 27 ISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESEN 86
++A++F L+P VIE ++RGERAYDI+SRLLK+RII + GP+ D + +++AQLLFLES++
Sbjct: 1 MNAKNF-LVPTVIEQTNRGERAYDIYSRLLKDRIIFLTGPVEDGVSDIIIAQLLFLESQD 59
Query: 87 PSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRAL 146
P+K I Y+NSPGG VTAGLAIYDTM YI+ ++TIC+GQAASMG++LL+SG KG+R +L
Sbjct: 60 PNKDIQFYINSPGGVVTAGLAIYDTMNYIKPDVSTICIGQAASMGAVLLSSGAKGKRFSL 119
Query: 147 PNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFM 206
PNS I+IHQPSGG GQA D+ I +QI+++ LN + +TGQ+IE IQK+ DRD+ M
Sbjct: 120 PNSNILIHQPSGGAQGQASDIQIQAEQILKIKKRLNKILSDNTGQTIEKIQKDTDRDFSM 179
Query: 207 TPEEAKEFGIIDEVID 222
EAKE+G+ID+VI+
Sbjct: 180 DAYEAKEYGLIDKVIE 195
>gi|194098886|ref|YP_002001950.1| ATP-dependent Clp protease proteolytic subunit [Neisseria
gonorrhoeae NCCP11945]
gi|385335915|ref|YP_005889862.1| ATP-dependent Clp protease proteolytic subunit [Neisseria
gonorrhoeae TCDC-NG08107]
gi|193934176|gb|ACF30000.1| putative endopeptidase [Neisseria gonorrhoeae NCCP11945]
gi|317164458|gb|ADV07999.1| ATP-dependent Clp protease proteolytic subunit [Neisseria
gonorrhoeae TCDC-NG08107]
Length = 209
Score = 253 bits (645), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 113/193 (58%), Positives = 155/193 (80%), Gaps = 2/193 (1%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
L+P VIE S RGERA+DI+SRLLKERI+ + GP+ D++A++VVAQLLFLESENP K I
Sbjct: 12 LVPTVIEQSGRGERAFDIYSRLLKERIVFLVGPVTDESANLVVAQLLFLESENPDKDIFF 71
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VTAG++IYDTM +I+ ++T+CLGQAASMG+ LL++G KG+R ALPNS IMI
Sbjct: 72 YINSPGGSVTAGMSIYDTMNFIKPDVSTLCLGQAASMGAFLLSAGEKGKRFALPNSRIMI 131
Query: 154 HQP--SGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEA 211
HQP SGG GQA D+ IH ++++++ + LN L KH G+ + ++++ DRD FM+ EEA
Sbjct: 132 HQPLISGGLGGQASDIEIHARELLKIKEKLNRLMAKHCGRDLADLERDTDRDNFMSAEEA 191
Query: 212 KEFGIIDEVIDQR 224
KE+G+ID+V++ R
Sbjct: 192 KEYGLIDQVLENR 204
>gi|325922708|ref|ZP_08184448.1| ATP-dependent Clp protease proteolytic subunit ClpP [Xanthomonas
gardneri ATCC 19865]
gi|325546825|gb|EGD17939.1| ATP-dependent Clp protease proteolytic subunit ClpP [Xanthomonas
gardneri ATCC 19865]
Length = 196
Score = 253 bits (645), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 113/189 (59%), Positives = 154/189 (81%)
Query: 37 MVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHMYLN 96
MV+E +SRGERAYDI+SRLLKER+I + GPI+D A+V+VAQLLFLE++NP K I +Y+N
Sbjct: 1 MVVEQTSRGERAYDIYSRLLKERLIFLVGPIDDHMANVIVAQLLFLEADNPEKDISIYIN 60
Query: 97 SPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMIHQP 156
SPGG VTAG+AIYDTMQYI+ ++TIC+GQAASMG+LLLASG G+R ALPNS +MIHQP
Sbjct: 61 SPGGVVTAGMAIYDTMQYIKPDVSTICVGQAASMGALLLASGAAGKRYALPNSRVMIHQP 120
Query: 157 SGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKEFGI 216
GG+ GQA D+ IH ++I+ + LN + KHTGQS+E I ++ +RD F + +A+ +G+
Sbjct: 121 LGGFQGQATDIDIHAREILTLRSRLNEILAKHTGQSLETIGRDTERDNFKSAVDAQAYGL 180
Query: 217 IDEVIDQRP 225
+D+V+++RP
Sbjct: 181 VDQVLERRP 189
>gi|218768333|ref|YP_002342845.1| ATP-dependent Clp protease proteolytic subunit [Neisseria
meningitidis Z2491]
gi|385328579|ref|YP_005882882.1| ATP-dependent Clp protease, proteolytic subunit [Neisseria
meningitidis alpha710]
gi|385338164|ref|YP_005892037.1| ATP-dependent Clp protease proteolytic subunit (endopeptidase Clp)
[Neisseria meningitidis WUE 2594]
gi|421540568|ref|ZP_15986713.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Neisseria
meningitidis 93004]
gi|421550808|ref|ZP_15996809.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Neisseria
meningitidis 69166]
gi|433471641|ref|ZP_20429027.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Neisseria meningitidis 68094]
gi|433475153|ref|ZP_20432494.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Neisseria meningitidis 88050]
gi|433477758|ref|ZP_20435078.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Neisseria meningitidis 70012]
gi|433479822|ref|ZP_20437112.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Neisseria meningitidis 63041]
gi|433513635|ref|ZP_20470425.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Neisseria meningitidis 63049]
gi|433515916|ref|ZP_20472684.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Neisseria meningitidis 2004090]
gi|433517708|ref|ZP_20474454.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Neisseria meningitidis 96023]
gi|433520090|ref|ZP_20476810.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Neisseria meningitidis 65014]
gi|433522025|ref|ZP_20478716.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Neisseria meningitidis 61103]
gi|433524250|ref|ZP_20480911.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Neisseria meningitidis 97020]
gi|433526432|ref|ZP_20483062.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Neisseria meningitidis 69096]
gi|433528383|ref|ZP_20484992.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Neisseria meningitidis NM3652]
gi|433530584|ref|ZP_20487173.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Neisseria meningitidis NM3642]
gi|433532853|ref|ZP_20489416.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Neisseria meningitidis 2007056]
gi|433534667|ref|ZP_20491207.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Neisseria meningitidis 2001212]
gi|433539093|ref|ZP_20495569.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Neisseria meningitidis 70030]
gi|433541168|ref|ZP_20497620.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Neisseria meningitidis 63006]
gi|18203136|sp|Q9JU33.1|CLPP_NEIMA RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|121052341|emb|CAM08672.1| endopeptidase [Neisseria meningitidis Z2491]
gi|308389431|gb|ADO31751.1| ATP-dependent Clp protease, proteolytic subunit [Neisseria
meningitidis alpha710]
gi|319410578|emb|CBY90947.1| ATP-dependent Clp protease proteolytic subunit (endopeptidase Clp)
[Neisseria meningitidis WUE 2594]
gi|402318722|gb|EJU54238.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Neisseria
meningitidis 93004]
gi|402329345|gb|EJU64706.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Neisseria
meningitidis 69166]
gi|432208493|gb|ELK64471.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Neisseria meningitidis 68094]
gi|432210971|gb|ELK66926.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Neisseria meningitidis 88050]
gi|432215423|gb|ELK71312.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Neisseria meningitidis 70012]
gi|432216161|gb|ELK72043.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Neisseria meningitidis 63041]
gi|432247167|gb|ELL02606.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Neisseria meningitidis 63049]
gi|432252842|gb|ELL08192.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Neisseria meningitidis 2004090]
gi|432253444|gb|ELL08788.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Neisseria meningitidis 96023]
gi|432254812|gb|ELL10146.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Neisseria meningitidis 65014]
gi|432259494|gb|ELL14765.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Neisseria meningitidis 97020]
gi|432259842|gb|ELL15112.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Neisseria meningitidis 61103]
gi|432261196|gb|ELL16453.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Neisseria meningitidis 69096]
gi|432265184|gb|ELL20380.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Neisseria meningitidis NM3652]
gi|432266676|gb|ELL21858.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Neisseria meningitidis 2007056]
gi|432267091|gb|ELL22272.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Neisseria meningitidis NM3642]
gi|432271409|gb|ELL26534.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Neisseria meningitidis 2001212]
gi|432273455|gb|ELL28553.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Neisseria meningitidis 70030]
gi|432277181|gb|ELL32230.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Neisseria meningitidis 63006]
Length = 204
Score = 253 bits (645), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 113/193 (58%), Positives = 155/193 (80%), Gaps = 2/193 (1%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
L+P VIE S RGERA+DI+SRLLKERI+ + GP+ D++A++VVAQLLFLESENP K I
Sbjct: 7 LVPTVIEQSGRGERAFDIYSRLLKERIVFLVGPVTDESANLVVAQLLFLESENPDKDIFF 66
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VTAG++IYDTM +I+ ++T+CLGQAASMG+ LL++G KG+R ALPNS IMI
Sbjct: 67 YINSPGGSVTAGMSIYDTMNFIKPDVSTLCLGQAASMGAFLLSAGEKGKRFALPNSRIMI 126
Query: 154 HQP--SGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEA 211
HQP SGG GQA D+ IH ++++++ + LN L KH G+ + ++++ DRD FM+ EEA
Sbjct: 127 HQPLISGGLGGQASDIEIHARELLKIKEKLNRLMAKHCGRDLADLERDTDRDNFMSAEEA 186
Query: 212 KEFGIIDEVIDQR 224
KE+G+ID+V++ R
Sbjct: 187 KEYGLIDQVLENR 199
>gi|421544605|ref|ZP_15990681.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Neisseria
meningitidis NM140]
gi|421546720|ref|ZP_15992765.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Neisseria
meningitidis NM183]
gi|421548972|ref|ZP_15994996.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Neisseria
meningitidis NM2781]
gi|421552923|ref|ZP_15998895.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Neisseria
meningitidis NM576]
gi|421561382|ref|ZP_16007230.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Neisseria meningitidis NM2657]
gi|402322965|gb|EJU58415.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Neisseria
meningitidis NM183]
gi|402323796|gb|EJU59238.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Neisseria
meningitidis NM140]
gi|402325651|gb|EJU61060.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Neisseria
meningitidis NM2781]
gi|402330102|gb|EJU65451.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Neisseria
meningitidis NM576]
gi|402338845|gb|EJU74075.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Neisseria meningitidis NM2657]
Length = 204
Score = 253 bits (645), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 113/193 (58%), Positives = 155/193 (80%), Gaps = 2/193 (1%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
L+P VIE S RGERA+DI+SRLLKERI+ + GP+ D++A++VVAQLLFLESENP K I
Sbjct: 7 LVPTVIEQSGRGERAFDIYSRLLKERIVFLVGPVTDESANLVVAQLLFLESENPDKDIFF 66
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VTAG++IYDTM +I+ ++T+CLGQAASMG+ LL++G KG+R ALPNS IMI
Sbjct: 67 YINSPGGSVTAGMSIYDTMNFIKPDVSTLCLGQAASMGAFLLSAGEKGKRFALPNSRIMI 126
Query: 154 HQP--SGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEA 211
HQP SGG GQA D+ IH ++++++ + LN L KH G+ + ++++ DRD FM+ EEA
Sbjct: 127 HQPLISGGLGGQASDIEIHARELLKIKEKLNRLMAKHCGRDLADLERDTDRDNFMSAEEA 186
Query: 212 KEFGIIDEVIDQR 224
KE+G+ID+V++ R
Sbjct: 187 KEYGLIDQVLENR 199
>gi|262276278|ref|ZP_06054087.1| ATP-dependent Clp protease proteolytic subunit [Grimontia hollisae
CIP 101886]
gi|262220086|gb|EEY71402.1| ATP-dependent Clp protease proteolytic subunit [Grimontia hollisae
CIP 101886]
Length = 207
Score = 253 bits (645), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 110/192 (57%), Positives = 152/192 (79%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E +SRGER+YDI+SRLLKER+I + G + D A++VVAQLLFLESENP K I
Sbjct: 15 ALVPMVVEQTSRGERSYDIYSRLLKERVIFLTGQVEDHMANLVVAQLLFLESENPDKDIF 74
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
+Y+NSPGG VTAG++IYDTMQYI+ ++T+C+GQA SMG+ LLA G KG+R LPNS +M
Sbjct: 75 LYINSPGGSVTAGMSIYDTMQYIKPDVSTVCMGQACSMGAFLLAGGAKGKRYCLPNSRVM 134
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQP GG+ GQA D+ IH ++I+ + LN L +HTGQ +EVI+++ DRD FM ++A
Sbjct: 135 IHQPLGGFQGQASDIQIHAQEILTIKHRLNTLLAEHTGQPLEVIERDTDRDNFMAAQDAV 194
Query: 213 EFGIIDEVIDQR 224
+G++D V+++R
Sbjct: 195 NYGLVDAVLNKR 206
>gi|375264871|ref|YP_005022314.1| ATP-dependent Clp protease proteolytic subunit [Vibrio sp. EJY3]
gi|369840195|gb|AEX21339.1| ATP-dependent Clp protease proteolytic subunit [Vibrio sp. EJY3]
Length = 208
Score = 253 bits (645), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 111/192 (57%), Positives = 151/192 (78%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E +SRGER+YDI+SRLLKER+I + G + D A++VVAQLLFLESENP K I
Sbjct: 15 ALVPMVVEQTSRGERSYDIYSRLLKERVIFLTGQVEDHMANLVVAQLLFLESENPDKDIF 74
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
+Y+NSPGG VTAG++IYDTMQ+I+ ++T+C+GQA SMG+ LLA G G+R LPNS +M
Sbjct: 75 LYINSPGGSVTAGMSIYDTMQFIKPNVSTVCMGQACSMGAFLLAGGAPGKRYVLPNSRVM 134
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQP GG+ GQA D+ IH ++I+ + LN L +HTGQ +EVI+++ DRD FM+ E+A
Sbjct: 135 IHQPLGGFQGQASDIQIHAQEILTIKQKLNKLLAEHTGQPLEVIERDTDRDNFMSAEQAV 194
Query: 213 EFGIIDEVIDQR 224
E+GI+D V+ R
Sbjct: 195 EYGIVDAVLRHR 206
>gi|343496564|ref|ZP_08734660.1| ATP-dependent Clp protease proteolytic subunit [Vibrio
nigripulchritudo ATCC 27043]
gi|342821177|gb|EGU55971.1| ATP-dependent Clp protease proteolytic subunit [Vibrio
nigripulchritudo ATCC 27043]
Length = 208
Score = 253 bits (645), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 110/189 (58%), Positives = 151/189 (79%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E +SRGER+YDI+SRLLKERII + G + D A++VVAQLLFLESENP K I
Sbjct: 15 ALVPMVVEQTSRGERSYDIYSRLLKERIIFLTGQVEDQMANLVVAQLLFLESENPDKDIF 74
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
+Y+NSPGG VTAG++IYDTMQYI+ ++T+C+GQA SMG+ LLA G +G+R LPNS +M
Sbjct: 75 LYINSPGGSVTAGMSIYDTMQYIKPNVSTVCMGQACSMGAFLLAGGAEGKRHVLPNSRVM 134
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQP GG+ GQA D+ IH ++I+ + LN L +HTGQ +EVI+++ DRD FM+ ++A
Sbjct: 135 IHQPLGGFQGQASDIQIHAQEILTIKQKLNKLLAEHTGQPLEVIERDTDRDNFMSADQAV 194
Query: 213 EFGIIDEVI 221
E+G++D V+
Sbjct: 195 EYGLVDSVL 203
>gi|317153552|ref|YP_004121600.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Desulfovibrio
aespoeensis Aspo-2]
gi|316943803|gb|ADU62854.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Desulfovibrio
aespoeensis Aspo-2]
Length = 202
Score = 253 bits (645), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 119/206 (57%), Positives = 159/206 (77%), Gaps = 7/206 (3%)
Query: 35 IPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHMY 94
IPMVIE + R ERAYDI+SRLLK+RII ++ I+D A ++ AQLLFLESE+P K I+MY
Sbjct: 4 IPMVIETTGRTERAYDIYSRLLKDRIILLSSAIDDHVASLICAQLLFLESEDPEKEIYMY 63
Query: 95 LNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMIH 154
+NSPGG V+AG+AIYDTMQYI +P++T+CLGQAASMG+LLLA+G +G R ALP+S IMIH
Sbjct: 64 INSPGGVVSAGMAIYDTMQYISAPVSTLCLGQAASMGALLLAAGAQGMRYALPHSRIMIH 123
Query: 155 QPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKEF 214
QP GG GQA D+ IH K+I+R+ D LN + HTGQ ++ I+ + +RDYFM+ EEA ++
Sbjct: 124 QPLGGTQGQASDIHIHAKEILRLRDELNGILAGHTGQKLDKIRDDTERDYFMSSEEAVKY 183
Query: 215 GIIDEVIDQRPMALVTDAVGREGKEG 240
G+ID+V+ R A +EG++G
Sbjct: 184 GLIDKVMHSR-------ADAQEGRKG 202
>gi|407802230|ref|ZP_11149072.1| ATP-dependent Clp protease, proteolytic subunitclpp [Alcanivorax
sp. W11-5]
gi|407023905|gb|EKE35650.1| ATP-dependent Clp protease, proteolytic subunitclpp [Alcanivorax
sp. W11-5]
Length = 215
Score = 253 bits (645), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 111/202 (54%), Positives = 157/202 (77%), Gaps = 2/202 (0%)
Query: 23 PSAQISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFL 82
P+ SA L+PMVIE ++RGER++DI+SRLLKER+I + G + D A+++VAQ+LFL
Sbjct: 14 PAQNTSA--LGLVPMVIEQTARGERSFDIYSRLLKERVIFLVGQVEDHMANLIVAQMLFL 71
Query: 83 ESENPSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGE 142
ESENP K IH+Y+NSPGG VTAG++IYDTMQ+I+ ++T+C+GQAASMG+ LLA+G +G+
Sbjct: 72 ESENPDKDIHLYINSPGGSVTAGMSIYDTMQFIKPAVSTMCIGQAASMGAFLLAAGEQGK 131
Query: 143 RRALPNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDR 202
R ALPNS IMIHQP GG+ GQA D+ IH ++I+++ LN L HTG +E ++++ DR
Sbjct: 132 RFALPNSRIMIHQPLGGFQGQASDIEIHAREILKIKSRLNELLSHHTGMDLERVERDTDR 191
Query: 203 DYFMTPEEAKEFGIIDEVIDQR 224
D FM E AK +G++D+V+ +R
Sbjct: 192 DNFMDAEAAKAYGLVDQVLTKR 213
>gi|59801023|ref|YP_207735.1| ATP-dependent Clp protease proteolytic subunit [Neisseria
gonorrhoeae FA 1090]
gi|240013921|ref|ZP_04720834.1| putative endopeptidase [Neisseria gonorrhoeae DGI18]
gi|240016363|ref|ZP_04722903.1| putative endopeptidase [Neisseria gonorrhoeae FA6140]
gi|240121490|ref|ZP_04734452.1| putative endopeptidase [Neisseria gonorrhoeae PID24-1]
gi|254493943|ref|ZP_05107114.1| endopeptidase [Neisseria gonorrhoeae 1291]
gi|268595002|ref|ZP_06129169.1| ATP-dependent Clp protease proteolytic subunit [Neisseria
gonorrhoeae 35/02]
gi|268596618|ref|ZP_06130785.1| ATP-dependent Clp protease proteolytic subunit [Neisseria
gonorrhoeae FA19]
gi|268599230|ref|ZP_06133397.1| endopeptidase [Neisseria gonorrhoeae MS11]
gi|268601577|ref|ZP_06135744.1| endopeptidase [Neisseria gonorrhoeae PID18]
gi|268603916|ref|ZP_06138083.1| endopeptidase [Neisseria gonorrhoeae PID1]
gi|268682379|ref|ZP_06149241.1| endopeptidase [Neisseria gonorrhoeae PID332]
gi|268684537|ref|ZP_06151399.1| endopeptidase [Neisseria gonorrhoeae SK-92-679]
gi|268686847|ref|ZP_06153709.1| endopeptidase [Neisseria gonorrhoeae SK-93-1035]
gi|291043574|ref|ZP_06569290.1| ATP-dependent Clp protease proteolytic subunit [Neisseria
gonorrhoeae DGI2]
gi|293398887|ref|ZP_06643052.1| Clp protease [Neisseria gonorrhoeae F62]
gi|67460148|sp|Q5F914.1|CLPP_NEIG1 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|59717918|gb|AAW89323.1| putative endopeptidase [Neisseria gonorrhoeae FA 1090]
gi|226512983|gb|EEH62328.1| endopeptidase [Neisseria gonorrhoeae 1291]
gi|268548391|gb|EEZ43809.1| ATP-dependent Clp protease proteolytic subunit [Neisseria
gonorrhoeae 35/02]
gi|268550406|gb|EEZ45425.1| ATP-dependent Clp protease proteolytic subunit [Neisseria
gonorrhoeae FA19]
gi|268583361|gb|EEZ48037.1| endopeptidase [Neisseria gonorrhoeae MS11]
gi|268585708|gb|EEZ50384.1| endopeptidase [Neisseria gonorrhoeae PID18]
gi|268588047|gb|EEZ52723.1| endopeptidase [Neisseria gonorrhoeae PID1]
gi|268622663|gb|EEZ55063.1| endopeptidase [Neisseria gonorrhoeae PID332]
gi|268624821|gb|EEZ57221.1| endopeptidase [Neisseria gonorrhoeae SK-92-679]
gi|268627131|gb|EEZ59531.1| endopeptidase [Neisseria gonorrhoeae SK-93-1035]
gi|291012037|gb|EFE04026.1| ATP-dependent Clp protease proteolytic subunit [Neisseria
gonorrhoeae DGI2]
gi|291610301|gb|EFF39411.1| Clp protease [Neisseria gonorrhoeae F62]
Length = 204
Score = 253 bits (645), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 113/193 (58%), Positives = 155/193 (80%), Gaps = 2/193 (1%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
L+P VIE S RGERA+DI+SRLLKERI+ + GP+ D++A++VVAQLLFLESENP K I
Sbjct: 7 LVPTVIEQSGRGERAFDIYSRLLKERIVFLVGPVTDESANLVVAQLLFLESENPDKDIFF 66
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VTAG++IYDTM +I+ ++T+CLGQAASMG+ LL++G KG+R ALPNS IMI
Sbjct: 67 YINSPGGSVTAGMSIYDTMNFIKPDVSTLCLGQAASMGAFLLSAGEKGKRFALPNSRIMI 126
Query: 154 HQP--SGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEA 211
HQP SGG GQA D+ IH ++++++ + LN L KH G+ + ++++ DRD FM+ EEA
Sbjct: 127 HQPLISGGLGGQASDIEIHARELLKIKEKLNRLMAKHCGRDLADLERDTDRDNFMSAEEA 186
Query: 212 KEFGIIDEVIDQR 224
KE+G+ID+V++ R
Sbjct: 187 KEYGLIDQVLENR 199
>gi|254197976|ref|ZP_04904398.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
pseudomallei S13]
gi|169654717|gb|EDS87410.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
pseudomallei S13]
Length = 217
Score = 253 bits (645), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 114/205 (55%), Positives = 156/205 (76%)
Query: 21 SKPSAQISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLL 80
S+ A++ L+P+V+E S RGER+YDI+SRLLKERI+ + G +ND TA++VVAQLL
Sbjct: 13 SQAPRDFEAQALGLVPIVVETSGRGERSYDIYSRLLKERIVFMVGEVNDQTANLVVAQLL 72
Query: 81 FLESENPSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTK 140
FLESENP K I +Y+NSPGG V+AG+AIYDTMQ+++ ++T+C+G AASMG+ LLASG +
Sbjct: 73 FLESENPDKDISLYINSPGGSVSAGMAIYDTMQFVKPDVSTLCMGLAASMGAFLLASGAR 132
Query: 141 GERRALPNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNM 200
G+R ALPN+ +MIHQP GG GQA D+ I ++I+ + D LN L HTGQ +E I ++
Sbjct: 133 GKRYALPNARVMIHQPLGGARGQASDIEIQAREILYLRDRLNHLLAHHTGQDVERIARDT 192
Query: 201 DRDYFMTPEEAKEFGIIDEVIDQRP 225
DRD FM+ E+AK +G+ID V +RP
Sbjct: 193 DRDNFMSSEDAKAYGLIDHVSTKRP 217
>gi|71066496|ref|YP_265223.1| ATP-dependent Clp protease proteolytic subunit [Psychrobacter
arcticus 273-4]
gi|110816464|sp|Q4FQB9.1|CLPP_PSYA2 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|71039481|gb|AAZ19789.1| ATP-dependent Clp protease proteolytic subunit ClpP [Psychrobacter
arcticus 273-4]
Length = 225
Score = 252 bits (644), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 110/196 (56%), Positives = 159/196 (81%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E S+RGER++DIFSRLL+ER+I + G + D A+++VAQLLFLE+ENP K IH
Sbjct: 30 ALVPMVVEQSARGERSFDIFSRLLRERVIFLTGQVEDHMANLIVAQLLFLEAENPDKDIH 89
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
+Y+NSPGG V+AGLAI+DTM +I+ ++TIC+G A SMGS LLA+G KG+R AL N+ +M
Sbjct: 90 LYINSPGGSVSAGLAIFDTMNFIKPEVSTICMGGAYSMGSFLLAAGQKGKRYALANARVM 149
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQPSGG GQA D+ I+ ++I++ LN + + TGQS+E I+K+++RDY++ +EAK
Sbjct: 150 IHQPSGGAQGQATDIEINAREILKTRARLNEILAERTGQSVEKIEKDVERDYWLDAKEAK 209
Query: 213 EFGIIDEVIDQRPMAL 228
E+G+IDEV+++RP +L
Sbjct: 210 EYGLIDEVLERRPASL 225
>gi|407472866|ref|YP_006787266.1| ATP-dependent Clp protease proteolytic subunit ClpP [Clostridium
acidurici 9a]
gi|407049374|gb|AFS77419.1| ATP-dependent Clp protease proteolytic subunit ClpP [Clostridium
acidurici 9a]
Length = 194
Score = 252 bits (644), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 114/189 (60%), Positives = 152/189 (80%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+P+V+E + RGER+YDI+SRLLK+RII I+ IND TA +VVAQLLFLESE+P K I
Sbjct: 2 ALVPVVVEQTGRGERSYDIYSRLLKDRIIFISDEINDVTASLVVAQLLFLESEDPDKDIQ 61
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
MY+NSPGG +T+G AIYDTMQYI+ ++T C+G AASMG+ LLA+G KG+R ALPN+ +M
Sbjct: 62 MYINSPGGSITSGFAIYDTMQYIKPDVSTTCIGMAASMGAFLLAAGAKGKRFALPNAEVM 121
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQP GG GQA+D+ IH ++I++ + LN + + TGQ +E I+K+ DRD FM+ EEAK
Sbjct: 122 IHQPLGGTRGQAEDIKIHAERIIKTREQLNQILSERTGQPLERIEKDTDRDNFMSAEEAK 181
Query: 213 EFGIIDEVI 221
E+G+IDEVI
Sbjct: 182 EYGLIDEVI 190
>gi|424874186|ref|ZP_18297848.1| protease subunit of ATP-dependent protease [Rhizobium leguminosarum
bv. viciae WSM1455]
gi|393169887|gb|EJC69934.1| protease subunit of ATP-dependent protease [Rhizobium leguminosarum
bv. viciae WSM1455]
Length = 203
Score = 252 bits (644), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 111/194 (57%), Positives = 152/194 (78%)
Query: 31 SFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKP 90
+ L+PMVIE SSRGER++DI+SRLL+ERII +NG +ND + +V AQLLFLE+ENP KP
Sbjct: 4 AMQLVPMVIEQSSRGERSFDIYSRLLRERIIFLNGEVNDTVSALVCAQLLFLEAENPKKP 63
Query: 91 IHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNST 150
I++Y+NSPGG VT+G A+YDTM++IR+P++T+C+G A SMGS LL +G G R ALPN++
Sbjct: 64 INLYINSPGGVVTSGFAMYDTMRFIRAPVHTLCMGTARSMGSFLLMAGEAGGRAALPNAS 123
Query: 151 IMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEE 210
I+IHQPSGG+ GQA DM IH ++I++ + LY +H G+S E ++ MDRD FMT EE
Sbjct: 124 ILIHQPSGGFQGQASDMQIHAEEILKTKQRMTRLYAEHCGRSYEDFERGMDRDRFMTAEE 183
Query: 211 AKEFGIIDEVIDQR 224
A E+G+ID ++ R
Sbjct: 184 ALEWGLIDRILTVR 197
>gi|297250503|ref|ZP_06864443.2| ATP-dependent Clp protease, proteolytic subunit ClpP [Neisseria
polysaccharea ATCC 43768]
gi|296838809|gb|EFH22747.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Neisseria
polysaccharea ATCC 43768]
Length = 209
Score = 252 bits (644), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 113/193 (58%), Positives = 155/193 (80%), Gaps = 2/193 (1%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
L+P VIE S RGERA+DI+SRLLKERI+ + GP+ D++A++VVAQLLFLESENP K I
Sbjct: 12 LVPTVIEQSGRGERAFDIYSRLLKERIVFLVGPVTDESANLVVAQLLFLESENPDKDIFF 71
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VTAG++IYDTM +I+ ++T+CLGQAASMG+ LL++G KG+R ALPNS IMI
Sbjct: 72 YINSPGGSVTAGMSIYDTMNFIKPDVSTLCLGQAASMGAFLLSAGEKGKRFALPNSRIMI 131
Query: 154 HQP--SGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEA 211
HQP SGG GQA D+ IH ++++++ + LN L KH G+ + ++++ DRD FM+ EEA
Sbjct: 132 HQPLISGGLGGQASDIEIHARELLKIKEKLNRLMAKHCGRDLADLERDTDRDNFMSAEEA 191
Query: 212 KEFGIIDEVIDQR 224
KE+G+ID+V++ R
Sbjct: 192 KEYGLIDQVLENR 204
>gi|149194680|ref|ZP_01871775.1| ATP-dependent Clp protease proteolytic subunit [Caminibacter
mediatlanticus TB-2]
gi|149135103|gb|EDM23584.1| ATP-dependent Clp protease proteolytic subunit [Caminibacter
mediatlanticus TB-2]
Length = 196
Score = 252 bits (644), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 115/191 (60%), Positives = 153/191 (80%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
LIP VIE + RGERAYDI+SRLLK+RII + G IND TA ++VAQLLFLE+ENP K I++
Sbjct: 4 LIPTVIEKTGRGERAYDIYSRLLKDRIIMLQGEINDHTASLIVAQLLFLEAENPEKDIYL 63
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VT+G AIYDTM YI+ + TIC+GQAASMG+ LL+SG KG+R ALP++ IMI
Sbjct: 64 YINSPGGVVTSGFAIYDTMNYIKPDVVTICMGQAASMGAFLLSSGAKGKRFALPHARIMI 123
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQP GG GQA D+ IH K+I+R+ LN + ++TGQS+ I+K+ +RD+FM+ EEA +
Sbjct: 124 HQPLGGAQGQATDIEIHAKEILRMKKELNKILAENTGQSVRKIEKDTERDFFMSAEEAMK 183
Query: 214 FGIIDEVIDQR 224
+G+ID+V+ +R
Sbjct: 184 YGLIDKVLKKR 194
>gi|393773236|ref|ZP_10361634.1| ATP-dependent Clp protease, protease subunit [Novosphingobium sp.
Rr 2-17]
gi|392721116|gb|EIZ78583.1| ATP-dependent Clp protease, protease subunit [Novosphingobium sp.
Rr 2-17]
Length = 221
Score = 252 bits (644), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 112/193 (58%), Positives = 153/193 (79%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E +SRGER++DI+SRLL+ERI+ I G + D A ++VAQLLFLESENP+K I
Sbjct: 22 ALVPMVVEQTSRGERSFDIYSRLLRERIVFITGAVEDHMASLIVAQLLFLESENPAKDIS 81
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
MY+NSPGG VTAG+AI+DTMQYI+ ++T+C+GQAASMGS LLA+G G R ALPN+ IM
Sbjct: 82 MYINSPGGVVTAGMAIHDTMQYIKPRVSTVCIGQAASMGSFLLAAGEPGMRIALPNARIM 141
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
+HQPSGG G A D+ I ++I+R+ LN LY K+TG++++ I+K MDRD F+ +EA
Sbjct: 142 VHQPSGGAQGMASDIEIQAREILRMRRRLNDLYVKYTGKTLDAIEKAMDRDTFLEADEAL 201
Query: 213 EFGIIDEVIDQRP 225
FG++D+V + RP
Sbjct: 202 AFGLVDKVFETRP 214
>gi|399038248|ref|ZP_10734549.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Rhizobium sp.
CF122]
gi|398063911|gb|EJL55618.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Rhizobium sp.
CF122]
Length = 209
Score = 252 bits (644), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 112/194 (57%), Positives = 154/194 (79%)
Query: 31 SFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKP 90
+ +L+PMV+E ++RGER+YDI+SRLLKERII + GP+ D A +V AQLLFLE+ENP K
Sbjct: 8 AMALVPMVVEQTNRGERSYDIYSRLLKERIIFLTGPVEDHMATLVCAQLLFLEAENPKKE 67
Query: 91 IHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNST 150
I +Y+NSPGG VTAG+AIYDTMQ+I+ ++T+C+GQAASMGSLLLA+G K R A PNS
Sbjct: 68 IALYINSPGGVVTAGMAIYDTMQFIKPAVSTLCIGQAASMGSLLLAAGHKDMRFATPNSR 127
Query: 151 IMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEE 210
IM+HQPSGG+ GQA D+ H + I+++ LN +Y KHTG++ E ++K +DRD+FM +E
Sbjct: 128 IMVHQPSGGFQGQASDIERHARDILKMKRRLNEVYVKHTGRTYEEVEKTLDRDHFMDADE 187
Query: 211 AKEFGIIDEVIDQR 224
A+ +G+ID+V+ R
Sbjct: 188 AQTWGVIDKVLTSR 201
>gi|317050717|ref|YP_004111833.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfurispirillum indicum S5]
gi|316945801|gb|ADU65277.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfurispirillum indicum S5]
Length = 196
Score = 252 bits (644), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 112/191 (58%), Positives = 155/191 (81%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
L+P+V+E ++RGER+YDI+SRLLK+RI+ + I+D ++V++AQLLFLE+E+P K I +
Sbjct: 3 LVPIVVEQTARGERSYDIYSRLLKDRIVFLGTQIDDQISNVIIAQLLFLEAEDPEKDIFL 62
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VTAG+AIYDTMQYIR ++TIC+GQAASMG++LLA+G KG+R ALP+S IMI
Sbjct: 63 YINSPGGVVTAGMAIYDTMQYIRPKVSTICVGQAASMGAVLLAAGEKGKRFALPHSRIMI 122
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQP GG GQA D+ I ++I+R+ + LN + +HTG +E IQ++ DRD+FMT E+A+
Sbjct: 123 HQPLGGAQGQATDIEIQAREILRIKEMLNDILVRHTGADLEKIQRDTDRDFFMTGEQARA 182
Query: 214 FGIIDEVIDQR 224
+GIIDEVI R
Sbjct: 183 YGIIDEVIQSR 193
>gi|254282219|ref|ZP_04957187.1| ATP-dependent Clp protease, proteolytic subunit ClpP [gamma
proteobacterium NOR51-B]
gi|219678422|gb|EED34771.1| ATP-dependent Clp protease, proteolytic subunit ClpP [gamma
proteobacterium NOR51-B]
Length = 220
Score = 252 bits (644), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 114/220 (51%), Positives = 165/220 (75%), Gaps = 3/220 (1%)
Query: 8 LSRTSMATKFLQLSKPSAQISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPI 67
++R S+ ++ + P ++ L+PMVIE +SRGER++DI+SRLLKER+I + G I
Sbjct: 1 MTRQSIEKAMIRDTSPG---DIQNLGLVPMVIEQTSRGERSFDIYSRLLKERVIFVVGGI 57
Query: 68 NDDTAHVVVAQLLFLESENPSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQA 127
D A+++VAQLLFLESENP K IH+Y+NSPGG VTAGL+IYDTMQ+++ ++T+C+GQA
Sbjct: 58 EDHMANLIVAQLLFLESENPDKDIHIYINSPGGSVTAGLSIYDTMQFVKPDVSTMCIGQA 117
Query: 128 ASMGSLLLASGTKGERRALPNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCK 187
ASMG+ LL+ G KG+R LPN+ MIHQPSGG GQA D+ I K+I+ + + LN L
Sbjct: 118 ASMGAFLLSGGAKGKRYILPNARTMIHQPSGGAQGQASDIEIQAKEILYLRERLNRLMAD 177
Query: 188 HTGQSIEVIQKNMDRDYFMTPEEAKEFGIIDEVIDQRPMA 227
HTGQ++E I+++ +RD FM+ E++ E+G++DEV++ R A
Sbjct: 178 HTGQTLETIERDTERDRFMSAEQSVEYGLVDEVVENRVAA 217
>gi|398808177|ref|ZP_10567045.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Variovorax
sp. CF313]
gi|398088223|gb|EJL78790.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Variovorax
sp. CF313]
Length = 202
Score = 252 bits (644), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 113/195 (57%), Positives = 153/195 (78%)
Query: 30 RSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSK 89
+ ++PMVIE S RGER+YDI+SRLLKERII + G +ND TA++VVAQLLFLESENP K
Sbjct: 7 QGLGMVPMVIEQSGRGERSYDIYSRLLKERIIFLVGEVNDQTANLVVAQLLFLESENPDK 66
Query: 90 PIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNS 149
I Y+NSPGG V+AG+AIYDTMQ+I+ ++T+CLG AASMG+ LLA+G KG+R +LPNS
Sbjct: 67 DISFYINSPGGSVSAGMAIYDTMQFIKPDVSTMCLGFAASMGAFLLAAGEKGKRFSLPNS 126
Query: 150 TIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPE 209
IMIHQ GG GQA D+ IH + I+R D +N + + TGQ +E ++ + +RDYF+T +
Sbjct: 127 KIMIHQVLGGARGQATDIEIHARDILRTKDQMNRILAERTGQPLEKVKTDTERDYFLTAD 186
Query: 210 EAKEFGIIDEVIDQR 224
EAKE+G++D+V+ +R
Sbjct: 187 EAKEYGLVDQVVAKR 201
>gi|149926126|ref|ZP_01914388.1| ATP-dependent Clp protease proteolytic subunit [Limnobacter sp.
MED105]
gi|149824944|gb|EDM84156.1| ATP-dependent Clp protease proteolytic subunit [Limnobacter sp.
MED105]
Length = 215
Score = 252 bits (644), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 115/190 (60%), Positives = 151/190 (79%)
Query: 35 IPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHMY 94
+PMVIE S RGERAYDI+SRLLKER+I + GPIND A+V+VAQ+LFLESENP K I +Y
Sbjct: 19 VPMVIEQSGRGERAYDIYSRLLKERVIFLVGPINDQMANVIVAQMLFLESENPDKDIALY 78
Query: 95 LNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMIH 154
+NSPGG V+AG+AIYDTMQ+I+ ++T+C G AASMG+ LL+SGTKG+R +LPNS IMIH
Sbjct: 79 INSPGGSVSAGMAIYDTMQFIKPDVSTLCTGLAASMGAFLLSSGTKGKRFSLPNSRIMIH 138
Query: 155 QPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKEF 214
QP GG GQA D+ IH K+I+ + + LN + +TG++IE I ++ DRD FM + AKE+
Sbjct: 139 QPLGGVQGQASDIEIHAKEILYLREKLNGILADNTGKTIEEIARDTDRDNFMGADSAKEY 198
Query: 215 GIIDEVIDQR 224
G+ID+V+ R
Sbjct: 199 GLIDDVLKHR 208
>gi|440741131|ref|ZP_20920586.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
fluorescens BRIP34879]
gi|447917344|ref|YP_007397912.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas poae
RE*1-1-14]
gi|440373752|gb|ELQ10500.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
fluorescens BRIP34879]
gi|445201207|gb|AGE26416.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas poae
RE*1-1-14]
Length = 211
Score = 252 bits (644), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 109/192 (56%), Positives = 153/192 (79%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
L+PMV+E S+RGERAYDI+SRLLKER+I + GP+ D A+++ AQLLFLE+ENP K IH+
Sbjct: 19 LVPMVVEQSARGERAYDIYSRLLKERVIFLVGPVEDYMANLICAQLLFLEAENPDKDIHL 78
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VTAG++IYDTMQ+I+ ++T C+GQA SMG+ LL +G +G+R LPNS +MI
Sbjct: 79 YINSPGGSVTAGMSIYDTMQFIKPNVSTTCIGQACSMGAFLLTAGAEGKRFCLPNSRVMI 138
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQP GG+ GQA D+ IH K+I+ + + LN L KH+G ++E I+++ +RD FM+ E A+
Sbjct: 139 HQPLGGFQGQASDIEIHAKEILFIRERLNTLMAKHSGHTLEEIERDTNRDNFMSAEAARA 198
Query: 214 FGIIDEVIDQRP 225
+G+ID VI++RP
Sbjct: 199 YGLIDAVIEKRP 210
>gi|421563513|ref|ZP_16009332.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Neisseria
meningitidis NM2795]
gi|421907047|ref|ZP_16336935.1| peptidase S14, ClpP [Neisseria meningitidis alpha704]
gi|393292011|emb|CCI72904.1| peptidase S14, ClpP [Neisseria meningitidis alpha704]
gi|402341209|gb|EJU76396.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Neisseria
meningitidis NM2795]
Length = 204
Score = 252 bits (644), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 113/193 (58%), Positives = 155/193 (80%), Gaps = 2/193 (1%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
L+P VIE S RGERA+DI+SRLLKERI+ + GP+ D++A++VVAQLLFLESENP K I
Sbjct: 7 LVPTVIEQSGRGERAFDIYSRLLKERIVFLVGPVTDESANLVVAQLLFLESENPDKDIFF 66
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VTAG++IYDTM +I+ ++T+CLGQAASMG+ LL++G KG+R ALPNS IMI
Sbjct: 67 YINSPGGSVTAGMSIYDTMNFIKPDVSTLCLGQAASMGAFLLSAGEKGKRFALPNSRIMI 126
Query: 154 HQP--SGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEA 211
HQP SGG GQA D+ IH ++++++ + LN L KH G+ + ++++ DRD FM+ EEA
Sbjct: 127 HQPLISGGLGGQASDIEIHARELLKIKEKLNRLMAKHCGRDLADLERDTDRDNFMSAEEA 186
Query: 212 KEFGIIDEVIDQR 224
KE+G+ID+V++ R
Sbjct: 187 KEYGLIDQVLENR 199
>gi|350425874|ref|XP_003494260.1| PREDICTED: hypothetical protein LOC100749102 [Bombus impatiens]
Length = 2402
Score = 252 bits (644), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 108/188 (57%), Positives = 153/188 (81%)
Query: 31 SFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKP 90
S S++PMV+E SSRGERAYDI+SRLLKER+I +NG + D+ A+++VAQ+LFLE+ENP K
Sbjct: 435 SMSVVPMVVEQSSRGERAYDIYSRLLKERVIFLNGQVEDNMANLIVAQMLFLEAENPEKD 494
Query: 91 IHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNST 150
I++Y+NSPGG +T+G++IYDTMQ+I+ ++TICLGQA SMG+ LL +G KG+R LPN+
Sbjct: 495 IYLYINSPGGVITSGMSIYDTMQFIKPDVSTICLGQACSMGAFLLTAGAKGKRFCLPNAR 554
Query: 151 IMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEE 210
+MIHQP GGY GQA D+ IH +++++V +N L HTG+SI+ I+K+ DRD FM+ +E
Sbjct: 555 VMIHQPLGGYQGQATDIQIHAEEMLKVKRRMNELMAHHTGKSIKTIEKDTDRDNFMSAKE 614
Query: 211 AKEFGIID 218
A ++G+ID
Sbjct: 615 AMDYGLID 622
>gi|297538721|ref|YP_003674490.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Methylotenera
versatilis 301]
gi|297258068|gb|ADI29913.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Methylotenera
versatilis 301]
Length = 219
Score = 252 bits (644), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 114/210 (54%), Positives = 163/210 (77%), Gaps = 2/210 (0%)
Query: 20 LSKPSAQ--ISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVA 77
+ +P A+ IS + IPMV+E S RGER+YDI+SRLLKER+I + GP+ND +A++VVA
Sbjct: 9 MQQPQAELDISPQGLGYIPMVVEQSGRGERSYDIYSRLLKERVIFLVGPVNDMSANLVVA 68
Query: 78 QLLFLESENPSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLAS 137
QLLFLE+ENP K I +Y+NSPGG VTAG++IYDTMQ+I++ ++T+C+GQAASMG+ LLA+
Sbjct: 69 QLLFLEAENPDKDISLYINSPGGSVTAGMSIYDTMQFIKADVSTLCIGQAASMGAFLLAA 128
Query: 138 GTKGERRALPNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQ 197
G KG+R +LPNS +MIHQPSGG+ GQ+ D+ IH K+I+ + LN + HTG++ I
Sbjct: 129 GAKGKRFSLPNSRVMIHQPSGGFQGQSTDIEIHAKEILYLRAKLNDILAHHTGKTAAEID 188
Query: 198 KNMDRDYFMTPEEAKEFGIIDEVIDQRPMA 227
++ +RD FM+ ++ E+G+ID+VI+ R A
Sbjct: 189 RDTERDNFMSATQSVEYGMIDKVIESRTEA 218
>gi|299529913|ref|ZP_07043341.1| ATP-dependent Clp protease proteolytic subunit [Comamonas
testosteroni S44]
gi|298722085|gb|EFI63014.1| ATP-dependent Clp protease proteolytic subunit [Comamonas
testosteroni S44]
Length = 201
Score = 252 bits (644), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 106/198 (53%), Positives = 158/198 (79%)
Query: 31 SFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKP 90
S L+PMV+E S+RGER++DI+SRLL++R+I +NG +ND + +V AQLLFLE+ENP KP
Sbjct: 4 SMMLVPMVVEQSARGERSFDIYSRLLRDRVIFLNGEVNDAVSALVCAQLLFLEAENPDKP 63
Query: 91 IHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNST 150
IH+Y+NSPGG +T+GLA+YDTMQ+I+SP++T+C+G A SMGS LL +G G R A+PN++
Sbjct: 64 IHLYINSPGGVITSGLAMYDTMQFIKSPVHTLCMGTARSMGSFLLMAGEPGHRMAMPNAS 123
Query: 151 IMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEE 210
+ +HQP GG GQA D+ IH ++++R D + LY +H G+S + +++++DRD FMT +E
Sbjct: 124 LHVHQPLGGVRGQASDIRIHAEEMLRTKDRVTRLYAQHCGRSYQEVERDLDRDRFMTAKE 183
Query: 211 AKEFGIIDEVIDQRPMAL 228
A+E+G+ID+V+D+R L
Sbjct: 184 AREWGLIDKVLDRRTATL 201
>gi|325293013|ref|YP_004278877.1| ATP-dependent Clp protease, proteolytic subunit [Agrobacterium sp.
H13-3]
gi|325060866|gb|ADY64557.1| ATP-dependent Clp protease, proteolytic subunit [Agrobacterium sp.
H13-3]
Length = 203
Score = 252 bits (644), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 112/194 (57%), Positives = 151/194 (77%)
Query: 31 SFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKP 90
+ L+PMV+E S+RGER++DI+SRLL+ERII +NG +ND + +V AQLLFLE+ENP KP
Sbjct: 4 AMQLVPMVVEQSARGERSFDIYSRLLRERIIFLNGEVNDAVSALVCAQLLFLEAENPKKP 63
Query: 91 IHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNST 150
IH+Y+NSPGG VT+GLA+YDTM+YIR+P++T+C+G A SMGS LL +G G R ALPN++
Sbjct: 64 IHLYINSPGGVVTSGLAMYDTMRYIRAPVHTLCMGTARSMGSFLLMAGEPGARAALPNAS 123
Query: 151 IMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEE 210
I+IHQPSGG+ GQA DM IH ++I + + LY +H +S + + MDRD FMT EE
Sbjct: 124 ILIHQPSGGFQGQASDMLIHAEEIRQTKHRMTRLYAEHCKRSYDEFEAAMDRDRFMTVEE 183
Query: 211 AKEFGIIDEVIDQR 224
A E+G+ID V+D R
Sbjct: 184 ALEWGLIDRVLDVR 197
>gi|323495056|ref|ZP_08100145.1| ATP-dependent Clp protease proteolytic subunit [Vibrio brasiliensis
LMG 20546]
gi|323310713|gb|EGA63888.1| ATP-dependent Clp protease proteolytic subunit [Vibrio brasiliensis
LMG 20546]
Length = 208
Score = 252 bits (644), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 110/192 (57%), Positives = 152/192 (79%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E +SRGER+YDI+SRLLKERII + G + D A++VVAQLLFLESENP K I
Sbjct: 15 ALVPMVVEQTSRGERSYDIYSRLLKERIIFLTGQVEDHMANLVVAQLLFLESENPDKDIF 74
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
+Y+NSPGG VTAG++IYDTMQ+I+ ++T+C+GQA SMG+ LLA G G+R LPNS +M
Sbjct: 75 LYINSPGGSVTAGMSIYDTMQFIKPNVSTVCMGQACSMGAFLLAGGAPGKRHVLPNSRVM 134
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQP GG+ GQA D+ IH ++I+ + LN L +HTGQ +EVI+++ DRD FM+ ++A
Sbjct: 135 IHQPLGGFQGQASDIQIHAQEILTIKQKLNKLLAEHTGQPLEVIERDTDRDNFMSADQAV 194
Query: 213 EFGIIDEVIDQR 224
E+G++D V++ R
Sbjct: 195 EYGLVDSVLNHR 206
>gi|378951824|ref|YP_005209312.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
fluorescens F113]
gi|359761838|gb|AEV63917.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
fluorescens F113]
Length = 190
Score = 252 bits (644), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 111/189 (58%), Positives = 151/189 (79%)
Query: 37 MVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHMYLN 96
MVIE S+RGERAYDI+SRLLKER+I + GP+ D A+++ AQLLFLE+ENP K IH+Y+N
Sbjct: 1 MVIEQSARGERAYDIYSRLLKERVIFLVGPVEDYMANLICAQLLFLEAENPDKDIHLYIN 60
Query: 97 SPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMIHQP 156
SPGG VTAG++IYDTMQ+I+ ++T C+GQA SMG+ LL +G G+R LPNS +MIHQP
Sbjct: 61 SPGGSVTAGMSIYDTMQFIKPNVSTTCIGQACSMGAFLLTAGAHGKRYCLPNSRVMIHQP 120
Query: 157 SGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKEFGI 216
GG+ GQA D+ IH K+I+ + + LN L KH+G+++E I+++ +RD FM+ E A+E+G+
Sbjct: 121 LGGFQGQASDIEIHAKEILFIRERLNTLMAKHSGRTLEEIERDTNRDNFMSAEAAREYGL 180
Query: 217 IDEVIDQRP 225
IDEVI QRP
Sbjct: 181 IDEVISQRP 189
>gi|237747781|ref|ZP_04578261.1| ATP-dependent Clp protease proteolytic subunit [Oxalobacter
formigenes OXCC13]
gi|229379143|gb|EEO29234.1| ATP-dependent Clp protease proteolytic subunit [Oxalobacter
formigenes OXCC13]
Length = 207
Score = 252 bits (644), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 113/198 (57%), Positives = 155/198 (78%)
Query: 27 ISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESEN 86
+ R +IPMVIE S RGERAYDI+SRLLKERI+ + GP+ D A+++VAQLLFLESEN
Sbjct: 9 LDTRMLGMIPMVIEQSGRGERAYDIYSRLLKERIVFLVGPVMDQNANLIVAQLLFLESEN 68
Query: 87 PSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRAL 146
P K I +Y+NSPGG V+AG+AIYDTMQ+I+ ++T+C G AASMG+ LLA+G KG+R +L
Sbjct: 69 PDKDISLYINSPGGSVSAGMAIYDTMQFIKPQVSTLCTGLAASMGAFLLAAGEKGKRFSL 128
Query: 147 PNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFM 206
PNS IMIHQPSGG GQA D+ IH ++I+ + + LN + +TG+SIE + ++ +RD FM
Sbjct: 129 PNSRIMIHQPSGGAQGQATDIEIHAREILYLRERLNGILADNTGKSIEQVARDTERDNFM 188
Query: 207 TPEEAKEFGIIDEVIDQR 224
+ EAK++G+ID+V+ +R
Sbjct: 189 SANEAKDYGLIDDVLSKR 206
>gi|255067667|ref|ZP_05319522.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Neisseria
sicca ATCC 29256]
gi|340362161|ref|ZP_08684558.1| ATP-dependent Clp protease, protease subunit [Neisseria macacae
ATCC 33926]
gi|349609434|ref|ZP_08888828.1| ATP-dependent Clp protease proteolytic subunit [Neisseria sp.
GT4A_CT1]
gi|255048141|gb|EET43605.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Neisseria
sicca ATCC 29256]
gi|339887762|gb|EGQ77284.1| ATP-dependent Clp protease, protease subunit [Neisseria macacae
ATCC 33926]
gi|348611857|gb|EGY61487.1| ATP-dependent Clp protease proteolytic subunit [Neisseria sp.
GT4A_CT1]
Length = 206
Score = 252 bits (644), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 113/193 (58%), Positives = 155/193 (80%), Gaps = 2/193 (1%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
L+P VIE S RGERA+DI+SRLLKERI+ + GP+ D++A++VVAQLLFLESENP K I
Sbjct: 9 LVPTVIEQSGRGERAFDIYSRLLKERIVFLVGPVTDESANLVVAQLLFLESENPDKDIFF 68
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VTAG++IYDTM +I+ ++T+CLGQAASMG+ LL++G KG+R ALPNS IMI
Sbjct: 69 YINSPGGSVTAGMSIYDTMNFIKPNVSTLCLGQAASMGAFLLSAGEKGKRFALPNSRIMI 128
Query: 154 HQP--SGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEA 211
HQP SGG GQA D+ IH ++++++ + LN L KH G+ + ++++ DRD FM+ EEA
Sbjct: 129 HQPLISGGLGGQASDIEIHARELLKIKEKLNRLMAKHCGRDLADLERDTDRDNFMSAEEA 188
Query: 212 KEFGIIDEVIDQR 224
KE+G+ID+V++ R
Sbjct: 189 KEYGLIDQVLENR 201
>gi|289523086|ref|ZP_06439940.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Anaerobaculum
hydrogeniformans ATCC BAA-1850]
gi|289503629|gb|EFD24793.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Anaerobaculum
hydrogeniformans ATCC BAA-1850]
Length = 194
Score = 252 bits (644), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 114/191 (59%), Positives = 152/191 (79%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
L+P+VIE + RGERAYDI+SRLLK+RII + I + A++VVAQ+LFLESE+P K I++
Sbjct: 4 LVPIVIEQTGRGERAYDIYSRLLKDRIIFLGDVIEEHLANLVVAQMLFLESEDPDKDINL 63
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VTAGL IYDTMQYI+ P++TIC+GQAASM ++LLA+G KG+R ALPNS +M+
Sbjct: 64 YINSPGGSVTAGLGIYDTMQYIKCPVSTICVGQAASMAAVLLAAGAKGKRIALPNSRVML 123
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQP GG GQA D+ IH K+I ++ D LN + HT Q IE + K+ DRD+FM+ EEA
Sbjct: 124 HQPLGGVQGQATDIEIHAKEIKKIRDRLNEIIAYHTNQDIEKVAKDTDRDFFMSAEEALA 183
Query: 214 FGIIDEVIDQR 224
+GI+D+VI++R
Sbjct: 184 YGIVDKVIEKR 194
>gi|34498013|ref|NP_902228.1| ATP-dependent Clp protease proteolytic subunit [Chromobacterium
violaceum ATCC 12472]
gi|60389718|sp|Q7NUY9.1|CLPP_CHRVO RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|34103868|gb|AAQ60228.1| ATP-dependent Clp protease proteolytic subunit [Chromobacterium
violaceum ATCC 12472]
Length = 210
Score = 252 bits (644), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 111/198 (56%), Positives = 155/198 (78%), Gaps = 3/198 (1%)
Query: 30 RSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSK 89
+ L+PMV+E S RGERAYDI+SRLLKERI+ + GP+ D++A++VVAQ+LFLESENP K
Sbjct: 8 QGLGLVPMVVEQSGRGERAYDIYSRLLKERIVFLVGPVTDESANLVVAQMLFLESENPDK 67
Query: 90 PIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNS 149
IH Y+NSPGG +TAG++IYDTM +I+ ++T+C+GQAASMG+ LLA+GT G+R AL NS
Sbjct: 68 DIHFYINSPGGSITAGMSIYDTMNFIKPDVSTLCIGQAASMGAFLLAAGTHGKRFALENS 127
Query: 150 TIMIHQP---SGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFM 206
+MIHQP GG SGQ D+ IH +++V+V +N L KH+GQ++E +Q + +RD FM
Sbjct: 128 RVMIHQPLLYGGGLSGQVTDIEIHARELVKVKAKMNELLAKHSGQTLERVQSDTERDNFM 187
Query: 207 TPEEAKEFGIIDEVIDQR 224
+ EEA+ +G+ID+V+ R
Sbjct: 188 SAEEARAYGMIDKVLSSR 205
>gi|388547449|ref|ZP_10150714.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas sp.
M47T1]
gi|388274536|gb|EIK94133.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas sp.
M47T1]
Length = 213
Score = 252 bits (644), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 111/193 (57%), Positives = 152/193 (78%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
L+PMV+E S+RGERAYDI+SRLLKER+I + GP+ D A++V AQLLFLE+ENP K IH+
Sbjct: 19 LVPMVVEQSARGERAYDIYSRLLKERVIFLIGPVEDYMANLVCAQLLFLEAENPDKDIHL 78
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VTAG++IYDTMQ+I+ ++T C+GQA SMG+ LLA G KG+R LPNS +MI
Sbjct: 79 YINSPGGSVTAGMSIYDTMQFIKPDVSTTCIGQACSMGAFLLAGGAKGKRYCLPNSRVMI 138
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQP GG+ GQA D+ IH ++I+ + LN L HTGQ++E I+++ +RD FM+ + A E
Sbjct: 139 HQPLGGFQGQASDIDIHAREILSIRHRLNELLAFHTGQTLEQIEQDTNRDNFMSADRAAE 198
Query: 214 FGIIDEVIDQRPM 226
+G++D VI++R M
Sbjct: 199 YGLVDSVINKRQM 211
>gi|422344962|ref|ZP_16425885.1| ATP-dependent Clp protease proteolytic subunit [Selenomonas noxia
F0398]
gi|355376104|gb|EHG23365.1| ATP-dependent Clp protease proteolytic subunit [Selenomonas noxia
F0398]
Length = 203
Score = 252 bits (644), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 118/191 (61%), Positives = 153/191 (80%), Gaps = 1/191 (0%)
Query: 35 IPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHMY 94
+PMV+E+SSRGERAYDI+SRLLKERII + GPI+D A+VVVAQ+LFLESE+P K IH+Y
Sbjct: 5 VPMVVENSSRGERAYDIYSRLLKERIIFLGGPIDDSVANVVVAQMLFLESEDPDKDIHLY 64
Query: 95 LNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMIH 154
+NSPGG VTAGLAIYDTMQYI+ ++TIC+GQAASMGS+LL +G K +R ALP++ IMIH
Sbjct: 65 INSPGGVVTAGLAIYDTMQYIKPDVSTICIGQAASMGSILLTAGAKAKRYALPHARIMIH 124
Query: 155 QPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKEF 214
QP GG GQ+ D+ I K+I+R+ + N + +HTGQ + I + +RD FM+ EEAK +
Sbjct: 125 QPLGGAQGQSTDIQIQAKEILRLREVGNHILARHTGQDEKKINVDTERDNFMSAEEAKAY 184
Query: 215 GIIDEVIDQRP 225
G+IDEV+ RP
Sbjct: 185 GLIDEVV-TRP 194
>gi|258621302|ref|ZP_05716336.1| ATP-dependent Clp protease proteolytic subunit [Vibrio mimicus
VM573]
gi|258625374|ref|ZP_05720271.1| ATP-dependent Clp protease proteolytic subunit [Vibrio mimicus
VM603]
gi|262166052|ref|ZP_06033789.1| ATP-dependent Clp protease proteolytic subunit [Vibrio mimicus
VM223]
gi|262171083|ref|ZP_06038761.1| ATP-dependent Clp protease proteolytic subunit [Vibrio mimicus
MB-451]
gi|424807155|ref|ZP_18232563.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
mimicus SX-4]
gi|449144449|ref|ZP_21775264.1| ATP-dependent Clp protease proteolytic subunit [Vibrio mimicus CAIM
602]
gi|258582365|gb|EEW07217.1| ATP-dependent Clp protease proteolytic subunit [Vibrio mimicus
VM603]
gi|258586690|gb|EEW11405.1| ATP-dependent Clp protease proteolytic subunit [Vibrio mimicus
VM573]
gi|261892159|gb|EEY38145.1| ATP-dependent Clp protease proteolytic subunit [Vibrio mimicus
MB-451]
gi|262025768|gb|EEY44436.1| ATP-dependent Clp protease proteolytic subunit [Vibrio mimicus
VM223]
gi|342325097|gb|EGU20877.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
mimicus SX-4]
gi|449079950|gb|EMB50869.1| ATP-dependent Clp protease proteolytic subunit [Vibrio mimicus CAIM
602]
Length = 208
Score = 252 bits (644), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 110/192 (57%), Positives = 152/192 (79%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E +SRGER+YDI+SRLLKER+I + G + D A++VVAQLLFLESENP K I
Sbjct: 15 ALVPMVVEQTSRGERSYDIYSRLLKERVIFLTGQVEDHMANLVVAQLLFLESENPDKDIF 74
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
+Y+NSPGG VTAG++IYDTMQ+I+ ++T+C+GQA SMG+ LLA G G+R LPNS +M
Sbjct: 75 LYINSPGGSVTAGMSIYDTMQFIKPNVSTVCMGQACSMGAFLLAGGAPGKRYVLPNSRVM 134
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQP GG+ GQA D+ IH K+I+ + + LN L +HTGQ +EVI+++ DRD FM+ ++A
Sbjct: 135 IHQPLGGFQGQASDIQIHAKEILTIKNKLNRLLAEHTGQPLEVIERDTDRDNFMSADQAV 194
Query: 213 EFGIIDEVIDQR 224
E+G++D V+ R
Sbjct: 195 EYGLVDAVLKHR 206
>gi|304387382|ref|ZP_07369574.1| ATP-dependent Clp protease proteolytic subunit [Neisseria
meningitidis ATCC 13091]
gi|304338633|gb|EFM04751.1| ATP-dependent Clp protease proteolytic subunit [Neisseria
meningitidis ATCC 13091]
Length = 209
Score = 252 bits (644), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 112/193 (58%), Positives = 155/193 (80%), Gaps = 2/193 (1%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
L+P VIE S RGERA+DI+SRLLKERI+ + GP+ D++A++VVAQLLFLESENP K I
Sbjct: 12 LVPTVIEQSGRGERAFDIYSRLLKERIVFLVGPVTDESANLVVAQLLFLESENPDKDIFF 71
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VTAG++IYDTM +I+ ++T+CLGQAASMG+ LL++G KG+R ALPNS IMI
Sbjct: 72 YINSPGGSVTAGMSIYDTMNFIKPDVSTLCLGQAASMGAFLLSAGEKGKRFALPNSRIMI 131
Query: 154 HQP--SGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEA 211
HQP SGG GQA D+ IH ++++++ + LN L KH G+ + ++++ DRD FM+ EEA
Sbjct: 132 HQPLISGGLGGQASDIEIHARELLKIKEKLNRLMAKHCGRDLADLERDTDRDNFMSAEEA 191
Query: 212 KEFGIIDEVIDQR 224
KE+G+ID++++ R
Sbjct: 192 KEYGLIDQILENR 204
>gi|119713091|gb|ABL97160.1| ATP-dependent Clp protease proteolytic subunit [uncultured marine
bacterium EB0_49D07]
Length = 204
Score = 252 bits (644), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 113/192 (58%), Positives = 154/192 (80%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
L+PMV+E + RGERA+DI+SRLLKERII + GPI+D +++VVAQLLFLESENP K I +
Sbjct: 8 LVPMVVEQTPRGERAFDIYSRLLKERIIFLTGPIDDYISNLVVAQLLFLESENPEKDISI 67
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG +T+GLAIYDTMQ+I ++T+C+GQAASMGSLLLA G +G+R AL NS IMI
Sbjct: 68 YINSPGGVITSGLAIYDTMQFIAPEVSTLCIGQAASMGSLLLAGGAEGKRFALTNSRIMI 127
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQP GG+SGQA D IH K+++ V +N + KHTG++++ ++++ DRD F+ EA
Sbjct: 128 HQPLGGFSGQASDFEIHAKEMLLVKQKVNEILSKHTGKTLKKVEQDTDRDNFLNATEAVT 187
Query: 214 FGIIDEVIDQRP 225
+GIIDE++++RP
Sbjct: 188 YGIIDEILEKRP 199
>gi|254673129|emb|CBA07904.1| ATP-dependent Clp protease, proteolytic subunit [Neisseria
meningitidis alpha275]
Length = 209
Score = 252 bits (644), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 112/193 (58%), Positives = 155/193 (80%), Gaps = 2/193 (1%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
L+P VIE S RGERA+DI+SRLLKERI+ + GP+ D++A++VVAQLLFLESENP K I
Sbjct: 12 LVPTVIEQSGRGERAFDIYSRLLKERIVFLVGPVTDESANLVVAQLLFLESENPDKDIFF 71
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VTAG++IYDTM +I+ ++T+CLGQAASMG+ LL++G KG+R ALPNS IMI
Sbjct: 72 YINSPGGSVTAGMSIYDTMNFIKPDVSTLCLGQAASMGAFLLSAGEKGKRFALPNSRIMI 131
Query: 154 HQP--SGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEA 211
HQP SGG GQA D+ IH ++++++ + LN L KH G+ + ++++ DRD FM+ EEA
Sbjct: 132 HQPLISGGLGGQASDIEIHARELLKIKEKLNRLMAKHCGRDLADLERDTDRDNFMSAEEA 191
Query: 212 KEFGIIDEVIDQR 224
KE+G+ID++++ R
Sbjct: 192 KEYGLIDQILENR 204
>gi|261364459|ref|ZP_05977342.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Neisseria
mucosa ATCC 25996]
gi|419795668|ref|ZP_14321253.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Neisseria sicca VK64]
gi|288567379|gb|EFC88939.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Neisseria
mucosa ATCC 25996]
gi|385700246|gb|EIG30498.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Neisseria sicca VK64]
Length = 206
Score = 252 bits (643), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 113/193 (58%), Positives = 155/193 (80%), Gaps = 2/193 (1%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
L+P VIE S RGERA+DI+SRLLKERI+ + GP+ D++A++VVAQLLFLESENP K I
Sbjct: 9 LVPTVIEQSGRGERAFDIYSRLLKERIVFLIGPVTDESANLVVAQLLFLESENPDKDIFF 68
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VTAG++IYDTM +I+ ++T+CLGQAASMG+ LL++G KG+R ALPNS IMI
Sbjct: 69 YINSPGGSVTAGMSIYDTMNFIKPNVSTLCLGQAASMGAFLLSAGEKGKRFALPNSRIMI 128
Query: 154 HQP--SGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEA 211
HQP SGG GQA D+ IH ++++++ + LN L KH G+ + ++++ DRD FM+ EEA
Sbjct: 129 HQPLISGGLGGQASDIEIHARELLKIKEKLNRLMAKHCGRDLADLERDTDRDNFMSAEEA 188
Query: 212 KEFGIIDEVIDQR 224
KE+G+ID+V++ R
Sbjct: 189 KEYGLIDQVLENR 201
>gi|429737530|ref|ZP_19271388.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Selenomonas sp. oral taxon 138 str. F0429]
gi|429152336|gb|EKX95166.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Selenomonas sp. oral taxon 138 str. F0429]
Length = 197
Score = 252 bits (643), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 120/191 (62%), Positives = 152/191 (79%), Gaps = 1/191 (0%)
Query: 37 MVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHMYLN 96
MV+E+SSRGERAYDI+SRLLKERII + GPI+D A+VVVAQLLFLESE+P K IH+Y+N
Sbjct: 1 MVVENSSRGERAYDIYSRLLKERIIFLGGPIDDSVANVVVAQLLFLESEDPDKDIHLYIN 60
Query: 97 SPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMIHQP 156
SPGG VTAGLAIYDTMQYI+ ++TIC+GQAASMGS+LL +G G+R ALP++ IMIHQP
Sbjct: 61 SPGGVVTAGLAIYDTMQYIKPDVSTICIGQAASMGSILLTAGAAGKRYALPHARIMIHQP 120
Query: 157 SGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKEFGI 216
GG GQ+ D+ I K+I+R+ + N + +HTGQ E I + +RD FM+ EEAK +G+
Sbjct: 121 LGGAQGQSTDIQIQAKEILRLREVGNNILARHTGQDPEKINVDTERDNFMSAEEAKAYGL 180
Query: 217 IDEVIDQRPMA 227
IDEV+ RP A
Sbjct: 181 IDEVV-TRPKA 190
>gi|262369923|ref|ZP_06063250.1| ATP-dependent Clp protease proteolytic subunit [Acinetobacter
johnsonii SH046]
gi|262314962|gb|EEY96002.1| ATP-dependent Clp protease proteolytic subunit [Acinetobacter
johnsonii SH046]
Length = 201
Score = 252 bits (643), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 108/193 (55%), Positives = 153/193 (79%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E SSRGER++DI+SRLL+ER+I + G + D+ A+++VAQ+LFLE+ENP K IH
Sbjct: 9 ALVPMVVEQSSRGERSFDIYSRLLRERVIFMTGEVEDNMANLIVAQMLFLEAENPDKDIH 68
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
+Y+NSPGG VTAG+AIYDTMQ+I+ + T C+GQAASMG+ LL SG KG+R L N+ +M
Sbjct: 69 LYINSPGGSVTAGMAIYDTMQFIKPDVVTYCMGQAASMGAFLLNSGAKGKRYCLENARVM 128
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQP GG+ GQA D+ IH ++I+ + + LN L +H+GQ E + ++ DRD FMT + AK
Sbjct: 129 IHQPLGGFRGQASDIEIHAREILFIKERLNRLMAEHSGQDYETVARDTDRDNFMTAQAAK 188
Query: 213 EFGIIDEVIDQRP 225
E+G++DEV+ +RP
Sbjct: 189 EYGLVDEVLSKRP 201
>gi|405379887|ref|ZP_11033732.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Rhizobium sp.
CF142]
gi|397323502|gb|EJJ27895.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Rhizobium sp.
CF142]
Length = 209
Score = 252 bits (643), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 112/194 (57%), Positives = 154/194 (79%)
Query: 31 SFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKP 90
+ +L+PMV+E ++RGER+YDI+SRLLKERII + GP+ D A +V AQLLFLE+ENP K
Sbjct: 8 AMALVPMVVEQTNRGERSYDIYSRLLKERIIFLTGPVEDHMATLVCAQLLFLEAENPKKE 67
Query: 91 IHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNST 150
I +Y+NSPGG VTAG+AIYDTMQ+I+ ++T+C+GQAASMGSLLLA+G K R A PNS
Sbjct: 68 IALYINSPGGVVTAGMAIYDTMQFIKPAVSTLCIGQAASMGSLLLAAGHKDMRFATPNSR 127
Query: 151 IMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEE 210
IM+HQPSGG+ GQA D+ H + I+++ LN +Y KHTG++ E ++K +DRD+FM +E
Sbjct: 128 IMVHQPSGGFQGQASDIERHARDILKMKRRLNEVYVKHTGRTYEEVEKTLDRDHFMDADE 187
Query: 211 AKEFGIIDEVIDQR 224
A+ +G+ID+V+ R
Sbjct: 188 AQTWGVIDKVLTSR 201
>gi|452851006|ref|YP_007492690.1| ATP-dependent Clp protease proteolytic subunit [Desulfovibrio
piezophilus]
gi|451894660|emb|CCH47539.1| ATP-dependent Clp protease proteolytic subunit [Desulfovibrio
piezophilus]
Length = 203
Score = 252 bits (643), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 121/207 (58%), Positives = 158/207 (76%), Gaps = 7/207 (3%)
Query: 35 IPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHMY 94
IPMVIE + R ERAYDI+SRLLK+RII + I+D A ++ AQLLFLESE+P K I+MY
Sbjct: 4 IPMVIETTGRTERAYDIYSRLLKDRIILLGSAIDDHVASLICAQLLFLESEDPEKEIYMY 63
Query: 95 LNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMIH 154
+NSPGG V++G+AIYDTMQYI +P+ T+CLGQAASMG+LLL +G G R ALP+S IMIH
Sbjct: 64 INSPGGSVSSGMAIYDTMQYISAPVATLCLGQAASMGALLLGAGEAGMRYALPHSRIMIH 123
Query: 155 QPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKEF 214
QP GG GQA D+ IH K+I+R+ D LN + HTGQ +E I+++ +RDYFM+ +EA+E+
Sbjct: 124 QPLGGAQGQASDIHIHAKEILRLRDELNEIMAGHTGQKLEKIREDTERDYFMSSKEAQEY 183
Query: 215 GIIDEVIDQRPMALVTDAVGREGKEGK 241
G+ID+V+ R DAV E K+GK
Sbjct: 184 GLIDKVMSSR-----KDAV--EDKKGK 203
>gi|82703457|ref|YP_413023.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Nitrosospira
multiformis ATCC 25196]
gi|110816459|sp|Q2Y6J0.1|CLPP_NITMU RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|82411522|gb|ABB75631.1| ATP-dependent Clp protease proteolytic subunit ClpP [Nitrosospira
multiformis ATCC 25196]
Length = 213
Score = 252 bits (643), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 112/195 (57%), Positives = 155/195 (79%)
Query: 30 RSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSK 89
+ LIPMVIE S RGERAYDI+SRLL+ER+I + GP+ + +A+++VAQLLFLESEN K
Sbjct: 14 QDLGLIPMVIETSGRGERAYDIYSRLLRERVIFLVGPVTEASANLIVAQLLFLESENADK 73
Query: 90 PIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNS 149
IH Y+NSPGG V+AG+A+YDTMQ+I+ ++T+C+GQAASMGSLLLA+G KG+R LPNS
Sbjct: 74 DIHFYINSPGGLVSAGMAVYDTMQFIKPDVSTLCIGQAASMGSLLLAAGAKGKRFCLPNS 133
Query: 150 TIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPE 209
+MIHQP GG+ GQA D+ IH ++I+ + + LN L KHTGQS+E I+++ DRD F+ E
Sbjct: 134 RVMIHQPLGGFQGQASDIEIHAREILYLKNRLNELLSKHTGQSMETIERDTDRDNFLGAE 193
Query: 210 EAKEFGIIDEVIDQR 224
++ ++G++D V+ R
Sbjct: 194 DSVKYGLVDAVLTSR 208
>gi|409436886|ref|ZP_11264045.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Rhizobium mesoamericanum STM3625]
gi|408751360|emb|CCM75199.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Rhizobium mesoamericanum STM3625]
Length = 202
Score = 252 bits (643), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 112/193 (58%), Positives = 153/193 (79%)
Query: 32 FSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPI 91
+L+PMV+E ++RGER+YDI+SRLLKERII + GP+ D A +V AQLLFLE+ENP K I
Sbjct: 1 MALVPMVVEQTNRGERSYDIYSRLLKERIIFLTGPVEDHMATLVCAQLLFLEAENPKKEI 60
Query: 92 HMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTI 151
+Y+NSPGG VTAG+AIYDTMQ+I+ ++T+C+GQAASMGSLLLA+G K R A PNS I
Sbjct: 61 ALYINSPGGVVTAGMAIYDTMQFIKPAVSTLCIGQAASMGSLLLAAGHKDMRFATPNSRI 120
Query: 152 MIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEA 211
M+HQPSGG+ GQA D+ H + I+++ LN +Y KHTG++ E ++K +DRD+FM +EA
Sbjct: 121 MVHQPSGGFQGQASDIERHARDILKMKRRLNEVYVKHTGRTYEEVEKTLDRDHFMDADEA 180
Query: 212 KEFGIIDEVIDQR 224
+ +G+ID+V+ R
Sbjct: 181 QTWGVIDKVLTSR 193
>gi|315122830|ref|YP_004063319.1| ATP-dependent Clp protease proteolytic subunit [Candidatus
Liberibacter solanacearum CLso-ZC1]
gi|313496232|gb|ADR52831.1| ATP-dependent Clp protease proteolytic subunit [Candidatus
Liberibacter solanacearum CLso-ZC1]
Length = 216
Score = 252 bits (643), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 113/194 (58%), Positives = 153/194 (78%)
Query: 31 SFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKP 90
S L+PMV+E ++RGER+YDI+SRLLKERI+ I G I D A ++ AQLLFLE+ENP K
Sbjct: 15 SLGLVPMVVEQTNRGERSYDIYSRLLKERIVFITGQIEDHMAALICAQLLFLEAENPQKE 74
Query: 91 IHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNST 150
I +Y+NSPGG VTAG+AIYDTMQ+I+ P++T+C+GQAASMGSLLLA+G KG R ALPN+
Sbjct: 75 ISLYINSPGGVVTAGMAIYDTMQFIKPPVSTLCIGQAASMGSLLLAAGKKGMRFALPNAR 134
Query: 151 IMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEE 210
IM+HQPSGG+SGQA D+ H + I+++ LN +Y KH G+ E +++ +DRD FM+ E+
Sbjct: 135 IMLHQPSGGFSGQASDIERHARDIIKIKHRLNNIYVKHCGRVYEEVEQTLDRDCFMSAED 194
Query: 211 AKEFGIIDEVIDQR 224
A +G+ID+V+ R
Sbjct: 195 AHAWGLIDKVLMSR 208
>gi|255528525|ref|ZP_05395307.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
carboxidivorans P7]
gi|296184877|ref|ZP_06853288.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
carboxidivorans P7]
gi|255507783|gb|EET84241.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
carboxidivorans P7]
gi|296050659|gb|EFG90082.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
carboxidivorans P7]
Length = 194
Score = 252 bits (643), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 108/193 (55%), Positives = 157/193 (81%)
Query: 32 FSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPI 91
SL+P+V+E ++RGER+YDI+SRLLK+R++ + +ND TA +VVAQLLFLE+E+P K I
Sbjct: 1 MSLVPVVVEQTNRGERSYDIYSRLLKDRVVMLTEEVNDVTASLVVAQLLFLEAEDPDKDI 60
Query: 92 HMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTI 151
++Y+NSPGG +TAG+AIYDTMQYI+ ++TIC+G AASMG+ LL +G KG+R ALPN+ I
Sbjct: 61 YLYINSPGGSITAGMAIYDTMQYIKPDVSTICIGMAASMGAFLLNAGAKGKRVALPNAEI 120
Query: 152 MIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEA 211
MIHQP GG+ GQA D+ IH ++I+++ LN ++ + TGQ +E I+K+ +RD FM+ EEA
Sbjct: 121 MIHQPLGGFQGQATDIGIHAERILKIKKKLNTIFSERTGQPLETIEKDTERDNFMSAEEA 180
Query: 212 KEFGIIDEVIDQR 224
KE+G+IDE++ ++
Sbjct: 181 KEYGLIDEIMVKK 193
>gi|399060628|ref|ZP_10745703.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Novosphingobium sp. AP12]
gi|398037346|gb|EJL30540.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Novosphingobium sp. AP12]
Length = 221
Score = 252 bits (643), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 113/193 (58%), Positives = 153/193 (79%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E +SRGER++DI+SRLL+ERI+ I G + D A ++VAQLLFLESENPSK I
Sbjct: 22 ALVPMVVEQTSRGERSFDIYSRLLRERIVFITGQVEDHMASLIVAQLLFLESENPSKDIS 81
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
MY+NSPGG VTAG+AI+DTMQYI+ ++T+C+GQAASMGS LLA+G G R ALPN+ IM
Sbjct: 82 MYINSPGGVVTAGMAIHDTMQYIKPRVSTVCIGQAASMGSFLLAAGEPGMRIALPNARIM 141
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
+HQPSGG G A D+ I ++I+R+ LN LY K+TG++++ I+K MDRD F+ +EA
Sbjct: 142 VHQPSGGAQGMASDIEIQAREILRMRRRLNDLYVKYTGKTLDAIEKAMDRDTFLEADEAL 201
Query: 213 EFGIIDEVIDQRP 225
FG++D+V + RP
Sbjct: 202 AFGLVDKVFETRP 214
>gi|115384910|ref|XP_001209002.1| ATP-dependent Clp protease proteolytic subunit [Aspergillus terreus
NIH2624]
gi|114196694|gb|EAU38394.1| ATP-dependent Clp protease proteolytic subunit [Aspergillus terreus
NIH2624]
Length = 258
Score = 252 bits (643), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 120/199 (60%), Positives = 155/199 (77%), Gaps = 4/199 (2%)
Query: 30 RSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSK 89
R+++ P V E G YDIFSRLLKERIIC+NG +++ + +VAQLLFLE++NP K
Sbjct: 43 RAWTPTPFVTETVGGGWHTYDIFSRLLKERIICLNGEVDETMSASIVAQLLFLEADNPQK 102
Query: 90 PIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNS 149
PIH+Y+NSPGG VTAGLAIYDTM YI SP++TIC+GQAASMGSLLL G G+R LP+S
Sbjct: 103 PIHLYINSPGGSVTAGLAIYDTMTYIASPVSTICVGQAASMGSLLLCGGHPGKRYCLPHS 162
Query: 150 TIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKH-TGQ---SIEVIQKNMDRDYF 205
+IM+HQPSGGY GQA D+ IH K+I+RV + LN +Y +H TG+ S+E I+K M+RDYF
Sbjct: 163 SIMMHQPSGGYFGQASDIAIHAKEILRVREQLNKIYKRHLTGKKEMSLEEIEKLMERDYF 222
Query: 206 MTPEEAKEFGIIDEVIDQR 224
M +EA + GI+DEV+D+R
Sbjct: 223 MGAKEALDMGIVDEVLDRR 241
>gi|296807623|ref|XP_002844228.1| ATP-dependent Clp protease proteolytic subunit [Arthroderma otae
CBS 113480]
gi|238843711|gb|EEQ33373.1| ATP-dependent Clp protease proteolytic subunit [Arthroderma otae
CBS 113480]
Length = 238
Score = 252 bits (643), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 120/207 (57%), Positives = 157/207 (75%), Gaps = 3/207 (1%)
Query: 21 SKPSAQISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLL 80
S SA + R+++ P V E G YDIFSRLLKERI+C+NG +++ + +VAQLL
Sbjct: 23 SHSSAPVPPRNWTPTPFVTETVGGGWHTYDIFSRLLKERIVCLNGEVDESLSAAIVAQLL 82
Query: 81 FLESENPSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTK 140
FLE++NP KPI +Y+NSPGG VTAGLAIYDTM YI+SP++TIC+GQAASMGSLLL G
Sbjct: 83 FLEADNPEKPIQLYINSPGGSVTAGLAIYDTMTYIQSPVSTICVGQAASMGSLLLCGGEA 142
Query: 141 GERRALPNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKH-TGQ--SIEVIQ 197
G+R LP+S+IMIHQPSGGY GQA D+ IH K+I+RV LN +Y +H TG+ ++E I+
Sbjct: 143 GKRYCLPHSSIMIHQPSGGYFGQATDIAIHAKEILRVRHQLNQIYKRHLTGKEMTLEEIE 202
Query: 198 KNMDRDYFMTPEEAKEFGIIDEVIDQR 224
K M+RDYFM +EA E GI+D ++D+R
Sbjct: 203 KLMERDYFMGAKEALEMGIVDSILDRR 229
>gi|224367556|ref|YP_002601719.1| protein ClpP1 [Desulfobacterium autotrophicum HRM2]
gi|259585947|sp|C0QGT0.1|CLPP_DESAH RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|223690272|gb|ACN13555.1| ClpP1 [Desulfobacterium autotrophicum HRM2]
Length = 205
Score = 252 bits (643), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 111/191 (58%), Positives = 154/191 (80%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
LIPMV+E S+RGERAYDI+SRLLK+RII + ++D+ A+++VAQLLFLESE+P K I+
Sbjct: 3 LIPMVVEQSNRGERAYDIYSRLLKDRIIFLGSAMDDEVANLIVAQLLFLESEDPEKDINF 62
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VTAG+A+YDTMQYI+ + T+C+GQAASMG+LLLA+G KG+R +LPNS IMI
Sbjct: 63 YINSPGGVVTAGMAVYDTMQYIKPDVATVCIGQAASMGALLLAAGAKGKRFSLPNSRIMI 122
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQP GG GQA D+ I +I+R+ + L+ + KHTGQ+ + I ++ DRD+FM+ ++AKE
Sbjct: 123 HQPLGGAQGQASDIKIQANEILRMKEVLSGILSKHTGQNFDKISEDTDRDFFMSGDQAKE 182
Query: 214 FGIIDEVIDQR 224
+G++D V+ R
Sbjct: 183 YGLVDHVVASR 193
>gi|392304356|emb|CCI70719.1| ATP-dependent Clp protease proteolytic subunit [Paenibacillus
polymyxa M1]
Length = 196
Score = 252 bits (643), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 114/197 (57%), Positives = 155/197 (78%), Gaps = 1/197 (0%)
Query: 32 FSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPI 91
SL+PMV+E ++RGER+YDI+SRLLK+RII ++GPI+DD A++V+AQLLFL +E+P K I
Sbjct: 1 MSLVPMVVEQTNRGERSYDIYSRLLKDRIIFLSGPIDDDVANLVIAQLLFLSAEDPEKDI 60
Query: 92 HMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTI 151
++Y+NSPGG VTAG+ IYDTMQ+I+ ++TIC+G AASMGSLLL +G G+R AL NS +
Sbjct: 61 NLYINSPGGSVTAGMGIYDTMQFIKPDVSTICVGMAASMGSLLLTAGAPGKRYALTNSEV 120
Query: 152 MIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEA 211
MIHQP GG GQA DM IH I++ LN +Y + TGQ +E I+++ DRD+FM EEA
Sbjct: 121 MIHQPLGGIQGQASDMLIHADWIIKTRAKLNQIYVERTGQPLEKIERDTDRDFFMEAEEA 180
Query: 212 KEFGIIDEVIDQRPMAL 228
K +GIID+V+ +P+ L
Sbjct: 181 KAYGIIDQVL-SKPINL 196
>gi|355755362|gb|EHH59109.1| Putative ATP-dependent Clp protease proteolytic subunit,
mitochondrial [Macaca fascicularis]
Length = 238
Score = 252 bits (643), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 120/198 (60%), Positives = 155/198 (78%), Gaps = 1/198 (0%)
Query: 28 SARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENP 87
+ R +L P + H RGERAYDI+SRLL+ERI+C+ GPI+D A +V+AQLLFL+SE+
Sbjct: 14 ACRYPALGPRLAAHG-RGERAYDIYSRLLRERIVCVMGPIDDSVASLVIAQLLFLQSESN 72
Query: 88 SKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALP 147
KPIHMY+NSPGG VTAGLAIYDTMQYI +PI T C+GQAASMGSLLLA+G+ G R +LP
Sbjct: 73 KKPIHMYINSPGGVVTAGLAIYDTMQYILNPICTWCVGQAASMGSLLLAAGSPGMRHSLP 132
Query: 148 NSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMT 207
NS IMIHQPSGG GQA D+ I ++I+++ L +Y KHT QS++VI+ M+RD +M+
Sbjct: 133 NSRIMIHQPSGGARGQATDIAIQAEEIMKLKKQLYNIYAKHTKQSLQVIESAMERDRYMS 192
Query: 208 PEEAKEFGIIDEVIDQRP 225
P EA+EFGI+D+V+ P
Sbjct: 193 PMEAQEFGILDKVLVHPP 210
>gi|254805112|ref|YP_003083333.1| ATP-dependent Clp protease proteolytic subunit [Neisseria
meningitidis alpha14]
gi|421542615|ref|ZP_15988722.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Neisseria
meningitidis NM255]
gi|421554915|ref|ZP_16000854.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Neisseria
meningitidis 98008]
gi|254668654|emb|CBA06317.1| ATP-dependent Clp protease, proteolytic subunit [Neisseria
meningitidis alpha14]
gi|402317445|gb|EJU52983.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Neisseria
meningitidis NM255]
gi|402332068|gb|EJU67399.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Neisseria
meningitidis 98008]
Length = 204
Score = 252 bits (643), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 112/193 (58%), Positives = 155/193 (80%), Gaps = 2/193 (1%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
L+P VIE S RGERA+DI+SRLLKERI+ + GP+ D++A++VVAQLLFLESENP K I
Sbjct: 7 LVPTVIEQSGRGERAFDIYSRLLKERIVFLVGPVTDESANLVVAQLLFLESENPDKDIFF 66
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VTAG++IYDTM +I+ ++T+CLGQAASMG+ LL++G KG+R ALPNS IMI
Sbjct: 67 YINSPGGSVTAGMSIYDTMNFIKPDVSTLCLGQAASMGAFLLSAGEKGKRFALPNSRIMI 126
Query: 154 HQP--SGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEA 211
HQP SGG GQA D+ IH ++++++ + LN L KH G+ + ++++ DRD FM+ EEA
Sbjct: 127 HQPLISGGLGGQASDIEIHARELLKIKEKLNRLMAKHCGRDLADLERDTDRDNFMSAEEA 186
Query: 212 KEFGIIDEVIDQR 224
KE+G+ID++++ R
Sbjct: 187 KEYGLIDQILENR 199
>gi|87121308|ref|ZP_01077198.1| putative ATP-dependent Clp protease, proteolytic subunit
[Marinomonas sp. MED121]
gi|86163465|gb|EAQ64740.1| putative ATP-dependent Clp protease, proteolytic subunit
[Marinomonas sp. MED121]
Length = 210
Score = 252 bits (643), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 114/208 (54%), Positives = 160/208 (76%), Gaps = 1/208 (0%)
Query: 18 LQLSKPS-AQISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVV 76
+ L+ P+ ++ S L+PMVIE ++RGER++DI+SRLLKER+I + G + D A++VV
Sbjct: 1 MNLTNPTTGPVAITSAGLVPMVIEQTARGERSFDIYSRLLKERVIFLVGQVEDHMANLVV 60
Query: 77 AQLLFLESENPSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLA 136
AQLLFLESENP K IH+Y+NSPGG VTAG++IYDTMQ+I+ ++T+C+GQAASMG+LLL
Sbjct: 61 AQLLFLESENPDKDIHLYINSPGGSVTAGMSIYDTMQFIKPDVSTMCIGQAASMGALLLT 120
Query: 137 SGTKGERRALPNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVI 196
+G G+R LPNS +MIHQP GGY GQA D+ IHT++I+ + LN + HTG+ IE +
Sbjct: 121 AGAAGKRYCLPNSRVMIHQPLGGYQGQASDIEIHTREILSIKHRLNEIISFHTGKPIEEV 180
Query: 197 QKNMDRDYFMTPEEAKEFGIIDEVIDQR 224
++ DRD FM P AKE+G+ID+++ +R
Sbjct: 181 AEDTDRDNFMDPTAAKEYGLIDDILLKR 208
>gi|412993988|emb|CCO14499.1| ATP-dependent Clp protease proteolytic subunit [Bathycoccus
prasinos]
Length = 226
Score = 252 bits (643), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 114/192 (59%), Positives = 153/192 (79%), Gaps = 2/192 (1%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
SL+PMVIE S RGERA+DIFSRLLKER++ +NGPI+DD + ++VAQLLFLESE+ ++PIH
Sbjct: 36 SLVPMVIESSPRGERAFDIFSRLLKERVVFLNGPIHDDMSALIVAQLLFLESESVTEPIH 95
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
Y+NSPGG VTAGL IYDTM Y+++PI+T+ +GQ +SMGSLLL++GT R+ALPNS IM
Sbjct: 96 FYINSPGGSVTAGLGIYDTMNYVQAPIHTLAVGQCSSMGSLLLSAGT--HRKALPNSRIM 153
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQPSGG G D+ I +I+++ + + +Y +HT Q +VI K ++RD FM+ EEAK
Sbjct: 154 IHQPSGGVQGTQSDIAIQASEILKLREKVTNIYAEHTKQKKDVIAKALERDTFMSAEEAK 213
Query: 213 EFGIIDEVIDQR 224
FGI+DE+I +R
Sbjct: 214 AFGIVDEIIVKR 225
>gi|170760538|ref|YP_001788551.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
botulinum A3 str. Loch Maree]
gi|226706446|sp|B1L1D7.1|CLPP_CLOBM RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|169407527|gb|ACA55938.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
botulinum A3 str. Loch Maree]
Length = 194
Score = 252 bits (643), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 108/193 (55%), Positives = 157/193 (81%)
Query: 32 FSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPI 91
SL+P+V+E ++RGER+YDI+SRLLK+RII ++ +ND TA ++VAQLLFLE+E+P K I
Sbjct: 1 MSLVPVVVEQTNRGERSYDIYSRLLKDRIIMLSEEVNDTTASLIVAQLLFLEAEDPDKDI 60
Query: 92 HMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTI 151
H+Y+NSPGG +T+G+AIYDTMQYI+ ++TIC+G AASMG+ LL +G KG+R ALPNS +
Sbjct: 61 HLYINSPGGSITSGMAIYDTMQYIKPDVSTICVGMAASMGAFLLVAGAKGKRYALPNSEV 120
Query: 152 MIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEA 211
MIHQP GG+ GQA D+ IH ++I+++ LN + TG+ +E ++ + +RD+F++ EEA
Sbjct: 121 MIHQPLGGFQGQATDIGIHAERILKMKKKLNTILSDRTGKPLEQVELDTERDHFLSAEEA 180
Query: 212 KEFGIIDEVIDQR 224
KE+G+IDEVID++
Sbjct: 181 KEYGLIDEVIDKK 193
>gi|254480762|ref|ZP_05094009.1| ATP-dependent Clp protease, proteolytic subunit ClpP [marine gamma
proteobacterium HTCC2148]
gi|214039345|gb|EEB80005.1| ATP-dependent Clp protease, proteolytic subunit ClpP [marine gamma
proteobacterium HTCC2148]
Length = 213
Score = 252 bits (643), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 112/194 (57%), Positives = 151/194 (77%)
Query: 31 SFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKP 90
+ L+PMV+E +SRGER+YDI+SRLLKER+I + G + D A+++VAQLLFLESENP K
Sbjct: 15 NLGLVPMVVEQTSRGERSYDIYSRLLKERVIFVVGQVEDHMANLIVAQLLFLESENPDKD 74
Query: 91 IHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNST 150
IH+Y+NSPGG VTAGL+IYDTMQ+I+ ++T+CLGQAASMG+ LL G KG+R LPN+
Sbjct: 75 IHLYINSPGGSVTAGLSIYDTMQFIKPDVSTMCLGQAASMGAFLLCGGAKGKRYCLPNAR 134
Query: 151 IMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEE 210
MIHQPSGG GQA D+ I K+I+ + + LN L +HTGQ +EVI+++ +RD FM EE
Sbjct: 135 TMIHQPSGGAQGQATDIEIQAKEILIIREKLNQLMAEHTGQPLEVIERDTERDRFMNAEE 194
Query: 211 AKEFGIIDEVIDQR 224
+ +G++DEV+ R
Sbjct: 195 STAYGLVDEVVTSR 208
>gi|152995749|ref|YP_001340584.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Marinomonas
sp. MWYL1]
gi|254763795|sp|A6VW20.1|CLPP_MARMS RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|150836673|gb|ABR70649.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Marinomonas
sp. MWYL1]
Length = 210
Score = 252 bits (643), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 112/198 (56%), Positives = 155/198 (78%)
Query: 27 ISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESEN 86
++ S L+PMVIE ++RGER++DI+SRLLKER+I + G + D A++VVAQLLFLESEN
Sbjct: 11 VAITSNGLVPMVIEQTARGERSFDIYSRLLKERVIFLVGQVEDHMANLVVAQLLFLESEN 70
Query: 87 PSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRAL 146
P K IH+Y+NSPGG VTAG++IYDTMQ+I+ ++T+C+GQAASMG+LLL +G G+R L
Sbjct: 71 PDKDIHLYINSPGGSVTAGMSIYDTMQFIKPDVSTMCIGQAASMGALLLTAGAAGKRYCL 130
Query: 147 PNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFM 206
PNS +MIHQP GGY GQA D+ IHT++I+ + LN + HTG+ IE + + DRD FM
Sbjct: 131 PNSRVMIHQPLGGYQGQASDIEIHTREILSIKHKLNEIISFHTGKPIEQVALDTDRDNFM 190
Query: 207 TPEEAKEFGIIDEVIDQR 224
P+ AK++G+IDE++ +R
Sbjct: 191 NPQTAKDYGLIDEILQKR 208
>gi|121727845|ref|ZP_01680912.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae V52]
gi|229507982|ref|ZP_04397487.1| ATP-dependent Clp protease proteolytic subunit [Vibrio cholerae BX
330286]
gi|229511781|ref|ZP_04401260.1| ATP-dependent Clp protease proteolytic subunit [Vibrio cholerae
B33]
gi|229515308|ref|ZP_04404768.1| ATP-dependent Clp protease proteolytic subunit [Vibrio cholerae TMA
21]
gi|229518918|ref|ZP_04408361.1| ATP-dependent Clp protease proteolytic subunit [Vibrio cholerae
RC9]
gi|229523942|ref|ZP_04413347.1| ATP-dependent Clp protease proteolytic subunit [Vibrio cholerae bv.
albensis VL426]
gi|229529052|ref|ZP_04418442.1| ATP-dependent Clp protease proteolytic subunit [Vibrio cholerae
12129(1)]
gi|229607528|ref|YP_002878176.1| ATP-dependent Clp protease proteolytic subunit [Vibrio cholerae
MJ-1236]
gi|254849010|ref|ZP_05238360.1| ATP-dependent Clp protease [Vibrio cholerae MO10]
gi|255745319|ref|ZP_05419268.1| ATP-dependent Clp protease proteolytic subunit [Vibrio cholera CIRS
101]
gi|262156043|ref|ZP_06029163.1| ATP-dependent Clp protease proteolytic subunit [Vibrio cholerae
INDRE 91/1]
gi|262167884|ref|ZP_06035584.1| ATP-dependent Clp protease proteolytic subunit [Vibrio cholerae
RC27]
gi|297579440|ref|ZP_06941368.1| ATP-dependent Clp protease [Vibrio cholerae RC385]
gi|298498040|ref|ZP_07007847.1| clp protease [Vibrio cholerae MAK 757]
gi|360035805|ref|YP_004937568.1| ATP-dependent Clp protease proteolytic subunit [Vibrio cholerae O1
str. 2010EL-1786]
gi|379741755|ref|YP_005333724.1| ATP-dependent Clp protease proteolytic subunit [Vibrio cholerae
IEC224]
gi|384424912|ref|YP_005634270.1| ATP-dependent Clp protease proteolytic subunit [Vibrio cholerae
LMA3984-4]
gi|417813967|ref|ZP_12460620.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-49A2]
gi|417817704|ref|ZP_12464333.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HCUF01]
gi|417821275|ref|ZP_12467889.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HE39]
gi|417825143|ref|ZP_12471731.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HE48]
gi|418334942|ref|ZP_12943856.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-06A1]
gi|418338559|ref|ZP_12947453.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-23A1]
gi|418346477|ref|ZP_12951239.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-28A1]
gi|418350239|ref|ZP_12954970.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-43A1]
gi|418355975|ref|ZP_12958694.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-61A1]
gi|419826901|ref|ZP_14350400.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae CP1033(6)]
gi|419830397|ref|ZP_14353882.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-1A2]
gi|419834076|ref|ZP_14357531.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-61A2]
gi|419837652|ref|ZP_14361090.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-46B1]
gi|421318223|ref|ZP_15768791.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae CP1032(5)]
gi|421321694|ref|ZP_15772247.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae CP1038(11)]
gi|421325493|ref|ZP_15776017.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae CP1041(14)]
gi|421329155|ref|ZP_15779665.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae CP1042(15)]
gi|421333063|ref|ZP_15783540.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae CP1046(19)]
gi|421336651|ref|ZP_15787112.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae CP1048(21)]
gi|421340082|ref|ZP_15790514.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-20A2]
gi|421344701|ref|ZP_15795104.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-43B1]
gi|421348140|ref|ZP_15798517.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-46A1]
gi|421351663|ref|ZP_15802028.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HE-25]
gi|421354596|ref|ZP_15804928.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HE-45]
gi|422897029|ref|ZP_16934479.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-40A1]
gi|422903231|ref|ZP_16938207.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-48A1]
gi|422907115|ref|ZP_16941919.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-70A1]
gi|422909692|ref|ZP_16944335.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HE-09]
gi|422913962|ref|ZP_16948468.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HFU-02]
gi|422917778|ref|ZP_16952096.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-02A1]
gi|422923227|ref|ZP_16956385.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae BJG-01]
gi|422926168|ref|ZP_16959182.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-38A1]
gi|423145487|ref|ZP_17133081.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-19A1]
gi|423150163|ref|ZP_17137477.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-21A1]
gi|423153983|ref|ZP_17141164.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-22A1]
gi|423157067|ref|ZP_17144160.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-32A1]
gi|423160637|ref|ZP_17147577.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-33A2]
gi|423165457|ref|ZP_17152186.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-48B2]
gi|423731474|ref|ZP_17704777.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-17A1]
gi|423735604|ref|ZP_17708801.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-41B1]
gi|423768488|ref|ZP_17712902.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-50A2]
gi|423822683|ref|ZP_17716693.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-55C2]
gi|423856424|ref|ZP_17720500.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-59A1]
gi|423882950|ref|ZP_17724087.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-60A1]
gi|423895365|ref|ZP_17727112.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-62A1]
gi|423930803|ref|ZP_17731506.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-77A1]
gi|423956436|ref|ZP_17734990.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HE-40]
gi|423985222|ref|ZP_17738539.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HE-46]
gi|423998208|ref|ZP_17741460.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-02C1]
gi|424002918|ref|ZP_17745993.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-17A2]
gi|424006707|ref|ZP_17749677.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-37A1]
gi|424009944|ref|ZP_17752881.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-44C1]
gi|424017101|ref|ZP_17756930.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-55B2]
gi|424020026|ref|ZP_17759812.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-59B1]
gi|424024688|ref|ZP_17764339.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-62B1]
gi|424027573|ref|ZP_17767176.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-69A1]
gi|424586845|ref|ZP_18026424.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae CP1030(3)]
gi|424595492|ref|ZP_18034813.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae CP1040(13)]
gi|424599408|ref|ZP_18038589.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
Cholerae CP1044(17)]
gi|424602129|ref|ZP_18041271.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae CP1047(20)]
gi|424607100|ref|ZP_18046044.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae CP1050(23)]
gi|424610923|ref|ZP_18049762.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-39A1]
gi|424613736|ref|ZP_18052524.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-41A1]
gi|424617716|ref|ZP_18056388.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-42A1]
gi|424622495|ref|ZP_18061003.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-47A1]
gi|424625394|ref|ZP_18063855.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-50A1]
gi|424629880|ref|ZP_18068167.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-51A1]
gi|424633923|ref|ZP_18072023.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-52A1]
gi|424637005|ref|ZP_18075013.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-55A1]
gi|424640914|ref|ZP_18078797.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-56A1]
gi|424645459|ref|ZP_18083195.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-56A2]
gi|424648982|ref|ZP_18086645.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-57A1]
gi|424653228|ref|ZP_18090608.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-57A2]
gi|424659631|ref|ZP_18096880.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HE-16]
gi|429887950|ref|ZP_19369454.1| ATP-dependent Clp protease proteolytic subunit [Vibrio cholerae
PS15]
gi|440710125|ref|ZP_20890776.1| ATP-dependent Clp protease proteolytic subunit [Vibrio cholerae
4260B]
gi|443504285|ref|ZP_21071243.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-64A1]
gi|443508183|ref|ZP_21074946.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-65A1]
gi|443512025|ref|ZP_21078663.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-67A1]
gi|443515583|ref|ZP_21082094.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-68A1]
gi|443519377|ref|ZP_21085773.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-71A1]
gi|443524267|ref|ZP_21090480.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-72A2]
gi|443527901|ref|ZP_21093950.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-78A1]
gi|443531864|ref|ZP_21097878.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-7A1]
gi|443535661|ref|ZP_21101539.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-80A1]
gi|443539208|ref|ZP_21105062.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-81A1]
gi|449055648|ref|ZP_21734316.1| ATP-dependent Clp protease proteolytic subunit [Vibrio cholerae O1
str. Inaba G4222]
gi|121629881|gb|EAX62295.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae V52]
gi|229332826|gb|EEN98312.1| ATP-dependent Clp protease proteolytic subunit [Vibrio cholerae
12129(1)]
gi|229337523|gb|EEO02540.1| ATP-dependent Clp protease proteolytic subunit [Vibrio cholerae bv.
albensis VL426]
gi|229343607|gb|EEO08582.1| ATP-dependent Clp protease proteolytic subunit [Vibrio cholerae
RC9]
gi|229348013|gb|EEO12972.1| ATP-dependent Clp protease proteolytic subunit [Vibrio cholerae TMA
21]
gi|229351746|gb|EEO16687.1| ATP-dependent Clp protease proteolytic subunit [Vibrio cholerae
B33]
gi|229355487|gb|EEO20408.1| ATP-dependent Clp protease proteolytic subunit [Vibrio cholerae BX
330286]
gi|229370183|gb|ACQ60606.1| ATP-dependent Clp protease proteolytic subunit [Vibrio cholerae
MJ-1236]
gi|254844715|gb|EET23129.1| ATP-dependent Clp protease [Vibrio cholerae MO10]
gi|255737149|gb|EET92545.1| ATP-dependent Clp protease proteolytic subunit [Vibrio cholera CIRS
101]
gi|262023611|gb|EEY42312.1| ATP-dependent Clp protease proteolytic subunit [Vibrio cholerae
RC27]
gi|262030221|gb|EEY48865.1| ATP-dependent Clp protease proteolytic subunit [Vibrio cholerae
INDRE 91/1]
gi|297537034|gb|EFH75867.1| ATP-dependent Clp protease [Vibrio cholerae RC385]
gi|297542373|gb|EFH78423.1| clp protease [Vibrio cholerae MAK 757]
gi|327484465|gb|AEA78872.1| ATP-dependent Clp protease proteolytic subunit [Vibrio cholerae
LMA3984-4]
gi|340036453|gb|EGQ97429.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-49A2]
gi|340037427|gb|EGQ98402.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HCUF01]
gi|340038906|gb|EGQ99880.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HE39]
gi|340046628|gb|EGR07558.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HE48]
gi|341621322|gb|EGS47068.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-70A1]
gi|341621465|gb|EGS47210.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-48A1]
gi|341622390|gb|EGS48053.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-40A1]
gi|341634452|gb|EGS59210.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HE-09]
gi|341636660|gb|EGS61354.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-02A1]
gi|341637623|gb|EGS62301.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HFU-02]
gi|341644319|gb|EGS68544.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae BJG-01]
gi|341646374|gb|EGS70488.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-38A1]
gi|356417651|gb|EHH71266.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-06A1]
gi|356418523|gb|EHH72120.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-21A1]
gi|356423097|gb|EHH76558.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-19A1]
gi|356428543|gb|EHH81769.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-22A1]
gi|356430201|gb|EHH83410.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-23A1]
gi|356433556|gb|EHH86745.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-28A1]
gi|356439724|gb|EHH92689.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-32A1]
gi|356444735|gb|EHH97544.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-43A1]
gi|356445734|gb|EHH98536.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-33A2]
gi|356450978|gb|EHI03683.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-48B2]
gi|356452473|gb|EHI05152.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-61A1]
gi|356646959|gb|AET27014.1| ATP-dependent Clp protease proteolytic subunit [Vibrio cholerae O1
str. 2010EL-1786]
gi|378795265|gb|AFC58736.1| ATP-dependent Clp protease proteolytic subunit [Vibrio cholerae
IEC224]
gi|395916481|gb|EJH27311.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae CP1032(5)]
gi|395917331|gb|EJH28159.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae CP1041(14)]
gi|395918688|gb|EJH29512.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae CP1038(11)]
gi|395927689|gb|EJH38452.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae CP1042(15)]
gi|395928465|gb|EJH39218.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae CP1046(19)]
gi|395931750|gb|EJH42494.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae CP1048(21)]
gi|395939365|gb|EJH50047.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-20A2]
gi|395940781|gb|EJH51462.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-43B1]
gi|395942719|gb|EJH53395.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-46A1]
gi|395952108|gb|EJH62722.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HE-25]
gi|395953721|gb|EJH64334.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HE-45]
gi|395958922|gb|EJH69377.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-56A2]
gi|395959527|gb|EJH69955.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-57A2]
gi|395962173|gb|EJH72474.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-42A1]
gi|395970884|gb|EJH80601.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-47A1]
gi|395973487|gb|EJH83046.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae CP1030(3)]
gi|395975870|gb|EJH85344.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae CP1047(20)]
gi|408007245|gb|EKG45338.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-39A1]
gi|408012536|gb|EKG50313.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-50A1]
gi|408013145|gb|EKG50890.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-41A1]
gi|408018228|gb|EKG55687.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-52A1]
gi|408023467|gb|EKG60630.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-56A1]
gi|408024055|gb|EKG61191.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-55A1]
gi|408032385|gb|EKG68971.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae CP1040(13)]
gi|408032931|gb|EKG69500.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-57A1]
gi|408041791|gb|EKG77885.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
Cholerae CP1044(17)]
gi|408043275|gb|EKG79281.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae CP1050(23)]
gi|408051987|gb|EKG87053.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HE-16]
gi|408055233|gb|EKG90172.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-51A1]
gi|408607691|gb|EKK81094.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae CP1033(6)]
gi|408620170|gb|EKK93182.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-1A2]
gi|408624096|gb|EKK97048.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-17A1]
gi|408629787|gb|EKL02456.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-41B1]
gi|408633769|gb|EKL06070.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-50A2]
gi|408634659|gb|EKL06894.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-55C2]
gi|408640712|gb|EKL12498.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-59A1]
gi|408641074|gb|EKL12855.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-60A1]
gi|408648898|gb|EKL20215.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-61A2]
gi|408654235|gb|EKL25377.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-77A1]
gi|408655165|gb|EKL26290.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-62A1]
gi|408657620|gb|EKL28698.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HE-40]
gi|408664453|gb|EKL35290.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HE-46]
gi|408845315|gb|EKL85431.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-37A1]
gi|408846088|gb|EKL86200.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-17A2]
gi|408852563|gb|EKL92385.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-02C1]
gi|408856200|gb|EKL95895.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-46B1]
gi|408860012|gb|EKL99666.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-55B2]
gi|408863739|gb|EKM03213.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-44C1]
gi|408867120|gb|EKM06482.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-59B1]
gi|408870398|gb|EKM09678.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-62B1]
gi|408878876|gb|EKM17869.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-69A1]
gi|429224949|gb|EKY31247.1| ATP-dependent Clp protease proteolytic subunit [Vibrio cholerae
PS15]
gi|439974348|gb|ELP50525.1| ATP-dependent Clp protease proteolytic subunit [Vibrio cholerae
4260B]
gi|443431230|gb|ELS73782.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-64A1]
gi|443435125|gb|ELS81269.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-65A1]
gi|443439008|gb|ELS88723.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-67A1]
gi|443442993|gb|ELS96295.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-68A1]
gi|443446795|gb|ELT03451.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-71A1]
gi|443449601|gb|ELT09892.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-72A2]
gi|443453773|gb|ELT17591.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-78A1]
gi|443457254|gb|ELT24651.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-7A1]
gi|443461201|gb|ELT32274.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-80A1]
gi|443465308|gb|ELT39968.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-81A1]
gi|448264687|gb|EMB01924.1| ATP-dependent Clp protease proteolytic subunit [Vibrio cholerae O1
str. Inaba G4222]
Length = 208
Score = 252 bits (643), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 110/192 (57%), Positives = 152/192 (79%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E +SRGER+YDI+SRLLKER+I + G + D A++VVAQLLFLESENP K I
Sbjct: 15 ALVPMVVEQTSRGERSYDIYSRLLKERVIFLTGQVEDHMANLVVAQLLFLESENPDKDIF 74
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
+Y+NSPGG VTAG++IYDTMQ+I+ ++T+C+GQA SMG+ LLA G G+R LPNS +M
Sbjct: 75 LYINSPGGSVTAGMSIYDTMQFIKPNVSTVCMGQACSMGAFLLAGGAPGKRYVLPNSRVM 134
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQP GG+ GQA D+ IH ++I+ + + LN L +HTGQ IEVI+++ DRD FM+ ++A
Sbjct: 135 IHQPLGGFQGQASDIQIHAQEILTIKNKLNRLLAEHTGQPIEVIERDTDRDNFMSADQAV 194
Query: 213 EFGIIDEVIDQR 224
E+G++D V+ R
Sbjct: 195 EYGLVDAVLKHR 206
>gi|377820658|ref|YP_004977029.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
sp. YI23]
gi|357935493|gb|AET89052.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
sp. YI23]
Length = 217
Score = 252 bits (643), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 111/199 (55%), Positives = 156/199 (78%)
Query: 27 ISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESEN 86
A++ L+PMV+E S RGERAYDI+SRLLKER++ + G +ND +A++VVAQLLFLESEN
Sbjct: 19 FEAQALGLVPMVVETSGRGERAYDIYSRLLKERVVFLVGEVNDQSANLVVAQLLFLESEN 78
Query: 87 PSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRAL 146
P K I +Y+NSPGG V+AG+AIYDTMQ+++ ++T+C+G AASMG+ LLASG KG+R AL
Sbjct: 79 PDKDISLYINSPGGSVSAGMAIYDTMQFVKPDVSTLCMGLAASMGAFLLASGAKGKRVAL 138
Query: 147 PNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFM 206
PN+ +MIHQP GG GQA D+ I ++I+ + + LN L HTGQ +E I ++ DRD FM
Sbjct: 139 PNARVMIHQPLGGARGQASDIEIQAREILYLKERLNQLLSHHTGQPVERIARDTDRDNFM 198
Query: 207 TPEEAKEFGIIDEVIDQRP 225
+ ++A+ +GI+D+V+ +RP
Sbjct: 199 SGDDAQAYGIVDQVLHKRP 217
>gi|282883083|ref|ZP_06291683.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Peptoniphilus
lacrimalis 315-B]
gi|300813694|ref|ZP_07094016.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Peptoniphilus
sp. oral taxon 836 str. F0141]
gi|281297060|gb|EFA89556.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Peptoniphilus
lacrimalis 315-B]
gi|300512236|gb|EFK39414.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Peptoniphilus
sp. oral taxon 836 str. F0141]
Length = 194
Score = 252 bits (643), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 112/193 (58%), Positives = 156/193 (80%)
Query: 32 FSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPI 91
+L+PMV+E ++RGER+YDI+SRLLK+RII +G +ND A ++VAQLLFLESE+P+K I
Sbjct: 1 MALVPMVVEQTNRGERSYDIYSRLLKDRIIFASGEVNDTMADLIVAQLLFLESEDPNKDI 60
Query: 92 HMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTI 151
+Y+NSPGG V+AGLAIYDTMQYI+ ++TIC+G AASMG++LL+SG KG+R ALPNS I
Sbjct: 61 QLYINSPGGSVSAGLAIYDTMQYIKPDVSTICIGMAASMGAILLSSGAKGKRFALPNSDI 120
Query: 152 MIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEA 211
MIHQPSGG G A D+ I ++I++ +LN + K+TGQ +E I+++ DRD+++ EA
Sbjct: 121 MIHQPSGGTQGMATDIQITAEKILKTRKSLNQILAKNTGQKLEKIERDADRDFWLDANEA 180
Query: 212 KEFGIIDEVIDQR 224
KE+G+ID+VI+ R
Sbjct: 181 KEYGLIDKVIENR 193
>gi|333368408|ref|ZP_08460607.1| ATP-dependent Clp protease, protease subunit [Psychrobacter sp.
1501(2011)]
gi|332977273|gb|EGK14064.1| ATP-dependent Clp protease, protease subunit [Psychrobacter sp.
1501(2011)]
Length = 240
Score = 252 bits (643), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 108/205 (52%), Positives = 163/205 (79%)
Query: 24 SAQISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLE 83
A +S +L+PMV+E S+RGER++DI+SRLL+ER+I + G + D+ A+++VAQ+LFLE
Sbjct: 35 DATVSVPQAALVPMVVEQSARGERSFDIYSRLLRERVIFLTGQVEDNMANLIVAQMLFLE 94
Query: 84 SENPSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGER 143
+ENP K IH+Y+NSPGG V+AGLA++DTM +I+ ++TIC+G A SMGS LLA+G KG+R
Sbjct: 95 AENPDKDIHLYINSPGGSVSAGLAMFDTMNFIKPDVSTICMGGAYSMGSFLLAAGQKGKR 154
Query: 144 RALPNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRD 203
AL NS +MIHQPSGG GQA D+ I+ ++I+++ D LN + + TGQ +E I+++++RD
Sbjct: 155 YALANSRVMIHQPSGGAQGQATDIEINAREILKIRDRLNRILAERTGQPLEKIERDVERD 214
Query: 204 YFMTPEEAKEFGIIDEVIDQRPMAL 228
Y++ +EAKE+G++DEV+++RP L
Sbjct: 215 YWLDAQEAKEYGLVDEVLERRPEEL 239
>gi|121635023|ref|YP_975268.1| ATP-dependent Clp protease proteolytic subunit [Neisseria
meningitidis FAM18]
gi|161870184|ref|YP_001599354.1| ATP-dependent Clp protease proteolytic subunit [Neisseria
meningitidis 053442]
gi|385324021|ref|YP_005878460.1| ATP-dependent Clp protease proteolytic subunit (endopeptidase Clp)
[Neisseria meningitidis 8013]
gi|385340219|ref|YP_005894091.1| endopeptidase Clp [Neisseria meningitidis G2136]
gi|385341772|ref|YP_005895643.1| endopeptidase Clp [Neisseria meningitidis M01-240149]
gi|385855371|ref|YP_005901884.1| endopeptidase Clp [Neisseria meningitidis M01-240355]
gi|385857382|ref|YP_005903894.1| endopeptidase Clp [Neisseria meningitidis NZ-05/33]
gi|416161423|ref|ZP_11606388.1| endopeptidase Clp [Neisseria meningitidis N1568]
gi|416170612|ref|ZP_11608364.1| endopeptidase Clp [Neisseria meningitidis OX99.30304]
gi|416177918|ref|ZP_11610287.1| endopeptidase Clp [Neisseria meningitidis M6190]
gi|416182797|ref|ZP_11612233.1| endopeptidase Clp [Neisseria meningitidis M13399]
gi|416187676|ref|ZP_11614288.1| endopeptidase Clp [Neisseria meningitidis M0579]
gi|416191946|ref|ZP_11616327.1| endopeptidase Clp [Neisseria meningitidis ES14902]
gi|416203926|ref|ZP_11620159.1| endopeptidase Clp [Neisseria meningitidis 961-5945]
gi|418288487|ref|ZP_12900968.1| endopeptidase Clp [Neisseria meningitidis NM233]
gi|418290736|ref|ZP_12902856.1| endopeptidase Clp [Neisseria meningitidis NM220]
gi|421538262|ref|ZP_15984439.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Neisseria
meningitidis 93003]
gi|421557414|ref|ZP_16003319.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Neisseria
meningitidis 80179]
gi|421559199|ref|ZP_16005074.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Neisseria
meningitidis 92045]
gi|421565657|ref|ZP_16011430.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Neisseria
meningitidis NM3081]
gi|421567663|ref|ZP_16013397.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Neisseria
meningitidis NM3001]
gi|433467460|ref|ZP_20424914.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Neisseria meningitidis 87255]
gi|433469508|ref|ZP_20426929.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Neisseria meningitidis 98080]
gi|433473708|ref|ZP_20431069.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Neisseria meningitidis 97021]
gi|433482272|ref|ZP_20439532.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Neisseria meningitidis 2006087]
gi|433484255|ref|ZP_20441481.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Neisseria meningitidis 2002038]
gi|433486522|ref|ZP_20443717.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Neisseria meningitidis 97014]
gi|433492711|ref|ZP_20449804.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Neisseria meningitidis NM586]
gi|433494845|ref|ZP_20451913.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Neisseria meningitidis NM762]
gi|433497012|ref|ZP_20454050.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Neisseria meningitidis M7089]
gi|433499074|ref|ZP_20456083.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Neisseria meningitidis M7124]
gi|433501050|ref|ZP_20458036.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Neisseria meningitidis NM174]
gi|433503280|ref|ZP_20460241.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Neisseria meningitidis NM126]
gi|166201829|sp|A1KUD9.1|CLPP_NEIMF RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|189082461|sp|A9LZN9.1|CLPP_NEIM0 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|120866729|emb|CAM10482.1| endopeptidase [Neisseria meningitidis FAM18]
gi|161595737|gb|ABX73397.1| ATP-dependent Clp protease, proteolytic subunit [Neisseria
meningitidis 053442]
gi|261392408|emb|CAX49950.1| ATP-dependent Clp protease proteolytic subunit (endopeptidase Clp)
[Neisseria meningitidis 8013]
gi|325128392|gb|EGC51275.1| endopeptidase Clp [Neisseria meningitidis N1568]
gi|325130325|gb|EGC53091.1| endopeptidase Clp [Neisseria meningitidis OX99.30304]
gi|325132488|gb|EGC55181.1| endopeptidase Clp [Neisseria meningitidis M6190]
gi|325134447|gb|EGC57092.1| endopeptidase Clp [Neisseria meningitidis M13399]
gi|325136185|gb|EGC58793.1| endopeptidase Clp [Neisseria meningitidis M0579]
gi|325138262|gb|EGC60831.1| endopeptidase Clp [Neisseria meningitidis ES14902]
gi|325142516|gb|EGC64917.1| endopeptidase Clp [Neisseria meningitidis 961-5945]
gi|325198463|gb|ADY93919.1| endopeptidase Clp [Neisseria meningitidis G2136]
gi|325201978|gb|ADY97432.1| endopeptidase Clp [Neisseria meningitidis M01-240149]
gi|325204312|gb|ADY99765.1| endopeptidase Clp [Neisseria meningitidis M01-240355]
gi|325208271|gb|ADZ03723.1| endopeptidase Clp [Neisseria meningitidis NZ-05/33]
gi|372201110|gb|EHP15077.1| endopeptidase Clp [Neisseria meningitidis NM220]
gi|372201785|gb|EHP15667.1| endopeptidase Clp [Neisseria meningitidis NM233]
gi|402317081|gb|EJU52620.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Neisseria
meningitidis 93003]
gi|402335052|gb|EJU70327.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Neisseria
meningitidis 80179]
gi|402336594|gb|EJU71854.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Neisseria
meningitidis 92045]
gi|402343696|gb|EJU78842.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Neisseria
meningitidis NM3001]
gi|402344092|gb|EJU79234.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Neisseria
meningitidis NM3081]
gi|432202294|gb|ELK58358.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Neisseria meningitidis 87255]
gi|432203778|gb|ELK59828.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Neisseria meningitidis 98080]
gi|432210006|gb|ELK65972.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Neisseria meningitidis 97021]
gi|432216065|gb|ELK71948.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Neisseria meningitidis 2006087]
gi|432220941|gb|ELK76758.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Neisseria meningitidis 2002038]
gi|432221807|gb|ELK77611.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Neisseria meningitidis 97014]
gi|432228497|gb|ELK84197.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Neisseria meningitidis NM586]
gi|432230048|gb|ELK85727.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Neisseria meningitidis NM762]
gi|432233505|gb|ELK89132.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Neisseria meningitidis M7089]
gi|432234908|gb|ELK90528.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Neisseria meningitidis M7124]
gi|432236341|gb|ELK91950.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Neisseria meningitidis NM174]
gi|432240045|gb|ELK95589.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Neisseria meningitidis NM126]
Length = 204
Score = 252 bits (643), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 112/193 (58%), Positives = 155/193 (80%), Gaps = 2/193 (1%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
L+P VIE S RGERA+DI+SRLLKERI+ + GP+ D++A++VVAQLLFLESENP K I
Sbjct: 7 LVPTVIEQSGRGERAFDIYSRLLKERIVFLVGPVTDESANLVVAQLLFLESENPDKDIFF 66
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VTAG++IYDTM +I+ ++T+CLGQAASMG+ LL++G KG+R ALPNS IMI
Sbjct: 67 YINSPGGSVTAGMSIYDTMNFIKPDVSTLCLGQAASMGAFLLSAGEKGKRFALPNSRIMI 126
Query: 154 HQP--SGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEA 211
HQP SGG GQA D+ IH ++++++ + LN L KH G+ + ++++ DRD FM+ EEA
Sbjct: 127 HQPLISGGLGGQASDIEIHARELLKIKEKLNRLMAKHCGRDLADLERDTDRDNFMSAEEA 186
Query: 212 KEFGIIDEVIDQR 224
KE+G+ID++++ R
Sbjct: 187 KEYGLIDQILENR 199
>gi|383787009|ref|YP_005471578.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Fervidobacterium pennivorans DSM 9078]
gi|383109856|gb|AFG35459.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Fervidobacterium pennivorans DSM 9078]
Length = 206
Score = 251 bits (642), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 117/187 (62%), Positives = 150/187 (80%)
Query: 35 IPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHMY 94
+P+VIE + R ERAYDI+SRLLK+RII + I+D A++VVAQLLFLE+ENP K I +Y
Sbjct: 15 VPIVIETTGRYERAYDIYSRLLKDRIIFLGSAIDDHVANLVVAQLLFLEAENPDKDIQLY 74
Query: 95 LNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMIH 154
+NSPGG VTAGLAIYDTMQY++ + TIC+GQAASM ++LLA+G KG+R ALPNS IMIH
Sbjct: 75 INSPGGLVTAGLAIYDTMQYVKCDVATICIGQAASMAAVLLAAGAKGKRFALPNSRIMIH 134
Query: 155 QPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKEF 214
QP GG G AKD+ I TK+++R+ +N + KHTGQ IE I+K+ DRD+FM+ +EAKE+
Sbjct: 135 QPLGGAEGTAKDVEILTKELLRIKHLINEILSKHTGQPIEKIEKDTDRDFFMSAQEAKEY 194
Query: 215 GIIDEVI 221
GIID VI
Sbjct: 195 GIIDRVI 201
>gi|251790648|ref|YP_003005369.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Dickeya zeae
Ech1591]
gi|247539269|gb|ACT07890.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Dickeya zeae
Ech1591]
Length = 207
Score = 251 bits (642), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 108/196 (55%), Positives = 156/196 (79%)
Query: 29 ARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPS 88
A +L+PMV+E +SRGER+YDI+SRLLKER+I + G + D A+++VAQ+LFLE+ENP
Sbjct: 11 APHMALVPMVVEQTSRGERSYDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPE 70
Query: 89 KPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPN 148
K I++Y+NSPGG +TAG++IYDTMQ+I+ ++TIC+GQAASMG+ LL +GTKG+R LPN
Sbjct: 71 KDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGTKGKRFCLPN 130
Query: 149 STIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTP 208
S +MIHQP GG+ GQA D+ IH K+I++V +N L KHTGQ +E+I+++ +RD F++
Sbjct: 131 SRVMIHQPLGGFQGQATDIEIHAKEILKVKARMNELMAKHTGQPLEMIERDTERDRFLSA 190
Query: 209 EEAKEFGIIDEVIDQR 224
EA ++G++D V+ R
Sbjct: 191 AEAVDYGLVDSVLTHR 206
>gi|375309934|ref|ZP_09775212.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Paenibacillus
sp. Aloe-11]
gi|390455656|ref|ZP_10241184.1| ATP-dependent clp protease proteolytic subunit [Paenibacillus
peoriae KCTC 3763]
gi|375077887|gb|EHS56117.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Paenibacillus
sp. Aloe-11]
Length = 196
Score = 251 bits (642), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 114/197 (57%), Positives = 155/197 (78%), Gaps = 1/197 (0%)
Query: 32 FSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPI 91
SL+PMV+E ++RGER+YDI+SRLLK+RII ++GPI+DD A++V+AQLLFL +E+P K I
Sbjct: 1 MSLVPMVVEQTNRGERSYDIYSRLLKDRIIFLSGPIDDDVANLVIAQLLFLAAEDPEKDI 60
Query: 92 HMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTI 151
++Y+NSPGG VTAG+ IYDTMQ+I+ ++TIC+G AASMGSLLL +G G+R AL NS +
Sbjct: 61 NLYINSPGGSVTAGMGIYDTMQFIKPDVSTICVGMAASMGSLLLTAGAPGKRYALTNSEV 120
Query: 152 MIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEA 211
MIHQP GG GQA DM IH I++ LN +Y + TGQ +E I+++ DRD+FM EEA
Sbjct: 121 MIHQPLGGIQGQASDMLIHADWIIKTRAKLNQIYVERTGQPLEKIERDTDRDFFMEAEEA 180
Query: 212 KEFGIIDEVIDQRPMAL 228
K +GIID+V+ +P+ L
Sbjct: 181 KAYGIIDQVL-SKPINL 196
>gi|225850859|ref|YP_002731093.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Persephonella
marina EX-H1]
gi|225644930|gb|ACO03116.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Persephonella
marina EX-H1]
Length = 202
Score = 251 bits (642), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 113/191 (59%), Positives = 156/191 (81%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
L+P+VIE + RGERAYDI+SRLLK+RII + PI+D A++++AQLLFLESE+P K I+M
Sbjct: 12 LVPIVIEQTPRGERAYDIYSRLLKDRIIMLGFPIDDHIANLIIAQLLFLESEDPEKDIYM 71
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VT+GLAIYDTM+YI+ + TIC+GQAASMG+ LL++G KG+R ALP+S IMI
Sbjct: 72 YINSPGGVVTSGLAIYDTMRYIKPDVVTICMGQAASMGAFLLSAGAKGKRYALPSSRIMI 131
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQP GG+ GQA D+ IH K+I+R+ LN +HTGQ +E I+++ +RD+FM+ +A E
Sbjct: 132 HQPLGGFQGQATDIEIHAKEILRLKKYLNERLAEHTGQPLEKIERDTERDFFMSAHDAVE 191
Query: 214 FGIIDEVIDQR 224
+G+ID+VI++R
Sbjct: 192 YGLIDKVIEKR 202
>gi|212709197|ref|ZP_03317325.1| hypothetical protein PROVALCAL_00230 [Providencia alcalifaciens DSM
30120]
gi|422019641|ref|ZP_16366184.1| ATP-dependent Clp protease proteolytic subunit [Providencia
alcalifaciens Dmel2]
gi|212688109|gb|EEB47637.1| hypothetical protein PROVALCAL_00230 [Providencia alcalifaciens DSM
30120]
gi|414102747|gb|EKT64337.1| ATP-dependent Clp protease proteolytic subunit [Providencia
alcalifaciens Dmel2]
Length = 206
Score = 251 bits (642), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 110/196 (56%), Positives = 153/196 (78%)
Query: 29 ARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPS 88
A +L+PMVIE +SRGER+YDI+SRLLKERII + G + D A+++VAQ+LFLE+ENP
Sbjct: 11 ASQMALVPMVIEQTSRGERSYDIYSRLLKERIIFLTGQVEDHMANLIVAQMLFLEAENPE 70
Query: 89 KPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPN 148
K I +Y+NSPGG +TAG++IYDTMQ+I+ ++TIC+GQA SMG+ LL +GTKG+R LPN
Sbjct: 71 KDIQLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQACSMGAFLLTAGTKGKRFCLPN 130
Query: 149 STIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTP 208
S +MIHQP GGY GQA D+ IH ++I++V +N L +HTG+SIE I ++ +RD F++
Sbjct: 131 SRVMIHQPLGGYQGQATDIEIHAQEILKVKSRMNELMAQHTGKSIEEISRDTERDRFLSA 190
Query: 209 EEAKEFGIIDEVIDQR 224
EAKE+G++D + R
Sbjct: 191 NEAKEYGLVDHIYTSR 206
>gi|422307873|ref|ZP_16395027.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae CP1035(8)]
gi|408618825|gb|EKK91883.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae CP1035(8)]
Length = 208
Score = 251 bits (642), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 110/192 (57%), Positives = 152/192 (79%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E +SRGER+YDI+SRLLKER+I + G + D A++VVAQLLFLESENP K I
Sbjct: 15 ALVPMVVEQTSRGERSYDIYSRLLKERVIFLTGQVEDHMANLVVAQLLFLESENPDKDIF 74
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
+Y+NSPGG VTAG++IYDTMQ+I+ ++T+C+GQA SMG+ LLA G G+R LPNS +M
Sbjct: 75 LYINSPGGSVTAGMSIYDTMQFIKPNVSTVCMGQACSMGAFLLAGGAPGKRYVLPNSRVM 134
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQP GG+ GQA D+ IH ++I+ + + LN L +HTGQ IEVI+++ DRD FM+ ++A
Sbjct: 135 IHQPLGGFQGQASDIQIHAQEILTIKNKLNRLLAEHTGQPIEVIERDTDRDNFMSADQAV 194
Query: 213 EFGIIDEVIDQR 224
E+G++D V+ R
Sbjct: 195 EYGLVDAVLKHR 206
>gi|418296393|ref|ZP_12908237.1| ATP-dependent Clp protease proteolytic subunit [Agrobacterium
tumefaciens CCNWGS0286]
gi|355539825|gb|EHH09063.1| ATP-dependent Clp protease proteolytic subunit [Agrobacterium
tumefaciens CCNWGS0286]
Length = 202
Score = 251 bits (642), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 110/194 (56%), Positives = 151/194 (77%)
Query: 31 SFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKP 90
+ L+PMV+E SSRGER++DI+SRLL+ERII +NG +ND + +V AQLLFLE+ENP KP
Sbjct: 4 TMQLVPMVVEQSSRGERSFDIYSRLLRERIIFLNGEVNDTVSALVCAQLLFLEAENPKKP 63
Query: 91 IHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNST 150
IH+Y+NSPGG VT+G A+YDTM+YIR+P++T+C+G A SMGS LL +G G R ALPN++
Sbjct: 64 IHLYINSPGGMVTSGFAMYDTMRYIRAPVHTLCMGTARSMGSFLLMAGEPGMRAALPNAS 123
Query: 151 IMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEE 210
I+IHQPSGG+ GQA DM IH ++I + + LY +H G+S E ++ MDRD FMT +E
Sbjct: 124 ILIHQPSGGFQGQASDMLIHAEEIRQTKHRMTRLYAEHCGRSYEEFERAMDRDRFMTVQE 183
Query: 211 AKEFGIIDEVIDQR 224
A E+ +ID +++ R
Sbjct: 184 ALEWSLIDRILEVR 197
>gi|336449969|ref|ZP_08620426.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Idiomarina
sp. A28L]
gi|336283126|gb|EGN76333.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Idiomarina
sp. A28L]
Length = 211
Score = 251 bits (642), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 110/192 (57%), Positives = 153/192 (79%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMVIE +++GER++DI+SRLLKE II + GP+ + A+++VAQ+LFLESENP K I+
Sbjct: 11 ALVPMVIEQTAKGERSFDIYSRLLKEGIIFLVGPVEEQMANLIVAQMLFLESENPEKDIY 70
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
+Y+NSPGG VTAG+AIYDTMQ+IR+ ++TIC+GQAASMG+ LLA G KG+R LPNS +M
Sbjct: 71 LYINSPGGSVTAGMAIYDTMQFIRNDVSTICIGQAASMGAFLLAGGAKGKRFCLPNSRVM 130
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQP GG+ GQA D+ IH ++I+ + D LN + +HTGQ IE + + DRD FM+ E++
Sbjct: 131 IHQPLGGFQGQASDIEIHAREIMYIKDKLNRILAEHTGQDIERVANDTDRDNFMSSEQSV 190
Query: 213 EFGIIDEVIDQR 224
+GI+DEV+ R
Sbjct: 191 AYGIVDEVLSHR 202
>gi|418408280|ref|ZP_12981596.1| ATP-dependent Clp protease proteolytic subunit [Agrobacterium
tumefaciens 5A]
gi|358005194|gb|EHJ97520.1| ATP-dependent Clp protease proteolytic subunit [Agrobacterium
tumefaciens 5A]
Length = 199
Score = 251 bits (642), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 112/191 (58%), Positives = 150/191 (78%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
L+PMV+E S+RGER++DI+SRLL+ERII +NG +ND + +V AQLLFLE+ENP KPIH+
Sbjct: 3 LVPMVVEQSARGERSFDIYSRLLRERIIFLNGEVNDAVSALVCAQLLFLEAENPKKPIHL 62
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VT+GLA+YDTM+YIR+P++T+C+G A SMGS LL +G G R ALPN++I+I
Sbjct: 63 YINSPGGVVTSGLAMYDTMRYIRAPVHTLCMGTARSMGSFLLMAGKPGARAALPNASILI 122
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQPSGG+ GQA DM IH ++I + + LY +H +S + + MDRD FMT EEA E
Sbjct: 123 HQPSGGFQGQASDMLIHAEEIRQTKHRMTRLYAEHCKRSYDEFEAAMDRDRFMTVEEALE 182
Query: 214 FGIIDEVIDQR 224
+G+ID V+D R
Sbjct: 183 WGLIDRVLDVR 193
>gi|338707314|ref|YP_004661515.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Zymomonas
mobilis subsp. pomaceae ATCC 29192]
gi|336294118|gb|AEI37225.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Zymomonas
mobilis subsp. pomaceae ATCC 29192]
Length = 211
Score = 251 bits (642), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 117/195 (60%), Positives = 151/195 (77%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E S+RGER++DI+SRLL+ERII + G + D A V+ AQLLFLE+ENP K I+
Sbjct: 11 ALVPMVVEQSNRGERSFDIYSRLLRERIIFVTGQVEDHMASVICAQLLFLEAENPKKDIY 70
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
+Y+NSPGG VTAGLAI+DTMQYIR + T+C+GQAASMGS LLA+G G R A NS IM
Sbjct: 71 LYINSPGGVVTAGLAIHDTMQYIRPKVGTLCIGQAASMGSFLLAAGEPGMRIATTNSRIM 130
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQPSGG G A D+ I ++I+R+ LN+LY K+T Q IE I+K MDRD F+ +EA+
Sbjct: 131 IHQPSGGAQGMAADIEIQAREILRMRHRLNSLYSKYTNQPIEEIEKAMDRDKFLEADEAQ 190
Query: 213 EFGIIDEVIDQRPMA 227
FG+ID+V D+RP A
Sbjct: 191 AFGLIDKVFDKRPAA 205
>gi|416213190|ref|ZP_11622174.1| endopeptidase Clp [Neisseria meningitidis M01-240013]
gi|325144548|gb|EGC66847.1| endopeptidase Clp [Neisseria meningitidis M01-240013]
Length = 204
Score = 251 bits (642), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 112/193 (58%), Positives = 155/193 (80%), Gaps = 2/193 (1%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
L+P VIE S RGERA+DI+SRLLKERI+ + GP+ D++A++VVAQLLFLESENP K I
Sbjct: 7 LVPTVIEQSGRGERAFDIYSRLLKERIVFLVGPVTDESANLVVAQLLFLESENPDKDIFF 66
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VTAG++IYDTM +I+ ++T+CLGQAASMG+ LL++G KG+R ALPNS IMI
Sbjct: 67 YINSPGGSVTAGMSIYDTMNFIKPDVSTLCLGQAASMGAFLLSAGEKGKRFALPNSRIMI 126
Query: 154 HQP--SGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEA 211
HQP SGG GQA D+ IH ++++++ + LN L KH G+ + ++++ DRD FM+ EEA
Sbjct: 127 HQPLISGGLGGQASDIEIHARELLKIKEKLNRLMAKHCGRDLADLERDTDRDNFMSAEEA 186
Query: 212 KEFGIIDEVIDQR 224
KE+G+ID++++ R
Sbjct: 187 KEYGLIDQILENR 199
>gi|363890989|ref|ZP_09318283.1| ATP-dependent Clp protease proteolytic subunit [Eubacteriaceae
bacterium CM5]
gi|363893165|ref|ZP_09320304.1| ATP-dependent Clp protease proteolytic subunit [Eubacteriaceae
bacterium CM2]
gi|363895295|ref|ZP_09322293.1| ATP-dependent Clp protease proteolytic subunit [Eubacteriaceae
bacterium ACC19a]
gi|402838212|ref|ZP_10886724.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Eubacteriaceae bacterium OBRC8]
gi|361957733|gb|EHL11038.1| ATP-dependent Clp protease proteolytic subunit [Eubacteriaceae
bacterium ACC19a]
gi|361961689|gb|EHL14872.1| ATP-dependent Clp protease proteolytic subunit [Eubacteriaceae
bacterium CM2]
gi|361962756|gb|EHL15865.1| ATP-dependent Clp protease proteolytic subunit [Eubacteriaceae
bacterium CM5]
gi|402273716|gb|EJU22911.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Eubacteriaceae bacterium OBRC8]
Length = 200
Score = 251 bits (642), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 113/192 (58%), Positives = 154/192 (80%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+ +P+V+E +SRGER+YDI+SRLLK+RII + +ND TA +VVAQLLFLESE+P K I
Sbjct: 2 AYVPVVVEQTSRGERSYDIYSRLLKDRIIFLGDEVNDQTASLVVAQLLFLESEDPDKDIS 61
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
+Y+NSPGG +TAG+AIYDT+QYI+ ++TIC+G AASMG+ LL GTKG+R ALPNS IM
Sbjct: 62 LYINSPGGSITAGMAIYDTIQYIKPDVSTICIGMAASMGAFLLNCGTKGKRFALPNSEIM 121
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQP GG GQA D+ IH ++I+++ + LN + + TGQ IEVI ++ +RD+FM+ EEAK
Sbjct: 122 IHQPLGGTRGQATDIKIHAERIIKMRENLNQIMAERTGQPIEVINRDTERDFFMSAEEAK 181
Query: 213 EFGIIDEVIDQR 224
++G+ID+VI R
Sbjct: 182 QYGLIDDVITNR 193
>gi|339007540|ref|ZP_08640114.1| ATP-dependent Clp protease proteolytic subunit 2 [Brevibacillus
laterosporus LMG 15441]
gi|421870979|ref|ZP_16302601.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Brevibacillus
laterosporus GI-9]
gi|338774743|gb|EGP34272.1| ATP-dependent Clp protease proteolytic subunit 2 [Brevibacillus
laterosporus LMG 15441]
gi|372459606|emb|CCF12150.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Brevibacillus
laterosporus GI-9]
Length = 192
Score = 251 bits (642), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 116/191 (60%), Positives = 151/191 (79%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
LIPMV+E ++RGERAYDI+SRLLK+RII + I+D+ A+ VVAQLLFLESE P K I +
Sbjct: 2 LIPMVVEQTNRGERAYDIYSRLLKDRIIFLGSEIDDEIANAVVAQLLFLESEEPGKDISL 61
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VTAG+AIYDTMQ+I+S ++TIC+G AASMG++LLA+G KG+R ALPNS +MI
Sbjct: 62 YINSPGGSVTAGMAIYDTMQFIKSDVSTICIGMAASMGAVLLAAGAKGKRFALPNSEVMI 121
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQP GG GQA+D+ IH I++ LN + + TGQ EVI ++ DRD FM+ EEAK
Sbjct: 122 HQPLGGVRGQAEDIRIHADWIIKTKRQLNEILAERTGQPYEVIDRDTDRDNFMSAEEAKN 181
Query: 214 FGIIDEVIDQR 224
+G+ID VI++R
Sbjct: 182 YGLIDSVIERR 192
>gi|374319921|ref|YP_005073050.1| ATP-dependent clp protease proteolytic subunit [Paenibacillus
terrae HPL-003]
gi|357198930|gb|AET56827.1| ATP-dependent clp protease proteolytic subunit [Paenibacillus
terrae HPL-003]
Length = 196
Score = 251 bits (642), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 114/197 (57%), Positives = 155/197 (78%), Gaps = 1/197 (0%)
Query: 32 FSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPI 91
SL+PMV+E ++RGER+YDI+SRLLK+RII ++GPI+DD A++V+AQLLFL +E+P K I
Sbjct: 1 MSLVPMVVEQTNRGERSYDIYSRLLKDRIIFLSGPIDDDVANLVIAQLLFLSAEDPEKDI 60
Query: 92 HMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTI 151
++Y+NSPGG VTAG+ IYDTMQ+I+ ++TIC+G AASMGSLLL +G G+R AL NS +
Sbjct: 61 NLYINSPGGSVTAGMGIYDTMQFIKPDVSTICVGMAASMGSLLLTAGALGKRYALTNSEV 120
Query: 152 MIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEA 211
MIHQP GG GQA DM IH I++ LN +Y + TGQ +E I+++ DRD+FM +EA
Sbjct: 121 MIHQPLGGIQGQASDMLIHADWIIKTRAKLNQIYVERTGQPLEKIERDTDRDFFMEADEA 180
Query: 212 KEFGIIDEVIDQRPMAL 228
K +GIID+V+ RP+ L
Sbjct: 181 KAYGIIDQVL-SRPINL 196
>gi|339478022|ref|YP_004706842.1| ATP-dependent Clp protease proteolytic subunit [Candidatus
Moranella endobia PCIT]
gi|338172573|gb|AEI74974.1| ATP-dependent Clp protease proteolytic subunit [Candidatus
Moranella endobia PCIT]
Length = 194
Score = 251 bits (642), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 111/192 (57%), Positives = 155/192 (80%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E +SRGER+YDIFSRLLK+RII + GP+ + A ++VAQL+FLE+ENP K I
Sbjct: 2 ALVPMVVEQTSRGERSYDIFSRLLKDRIIFMTGPVEEYMADLIVAQLMFLEAENPEKDIC 61
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
+Y+NSPGG +TAG++IYDTMQ+++ I+T CLGQAASMG+ LLA+G KG+R LPNS IM
Sbjct: 62 LYINSPGGVITAGMSIYDTMQFLKPDISTFCLGQAASMGAFLLAAGAKGKRFCLPNSRIM 121
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQP GG+ GQA D+ IH ++I++V +N L KHTGQS++VI+++ +RD F++ EA
Sbjct: 122 IHQPLGGFHGQATDIEIHAREILKVKVRMNELMAKHTGQSLDVIERDTERDRFLSAPEAL 181
Query: 213 EFGIIDEVIDQR 224
++GI+D V+ QR
Sbjct: 182 DYGIVDYVLSQR 193
>gi|90410782|ref|ZP_01218797.1| ATP-dependent Clp protease proteolytic subunit [Photobacterium
profundum 3TCK]
gi|90328413|gb|EAS44711.1| ATP-dependent Clp protease proteolytic subunit [Photobacterium
profundum 3TCK]
Length = 207
Score = 251 bits (642), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 109/192 (56%), Positives = 152/192 (79%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E +SRGER+YDI+SRLLKER+I + G + D A++VVAQLLFLESENP K I
Sbjct: 15 ALVPMVVEQTSRGERSYDIYSRLLKERVIFLTGQVEDHMANLVVAQLLFLESENPDKDIF 74
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
+Y+NSPGG VTAG++IYDTMQ+I+ ++T+C+GQA SMG+ LLA G KG+R LPNS +M
Sbjct: 75 LYINSPGGSVTAGMSIYDTMQFIKPNVSTVCMGQACSMGAFLLAGGAKGKRYCLPNSRVM 134
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQP GG+ GQA D+ IH ++I+ + LN L +HTGQ +E+++ + DRD FM+ ++A
Sbjct: 135 IHQPLGGFQGQASDIQIHAQEILTIKQRLNNLLAEHTGQPLEIVEGDTDRDNFMSADQAV 194
Query: 213 EFGIIDEVIDQR 224
E+G++D V+ QR
Sbjct: 195 EYGLVDSVLTQR 206
>gi|308070425|ref|YP_003872030.1| ATP-dependent Clp protease proteolytic subunit (endopeptidase Clp)
[Paenibacillus polymyxa E681]
gi|310643606|ref|YP_003948364.1| ATP-dependent clp protease proteolytic subunit [Paenibacillus
polymyxa SC2]
gi|305859704|gb|ADM71492.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Paenibacillus polymyxa E681]
gi|309248556|gb|ADO58123.1| ATP-dependent Clp protease proteolytic subunit [Paenibacillus
polymyxa SC2]
Length = 211
Score = 251 bits (642), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 114/197 (57%), Positives = 155/197 (78%), Gaps = 1/197 (0%)
Query: 32 FSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPI 91
SL+PMV+E ++RGER+YDI+SRLLK+RII ++GPI+DD A++V+AQLLFL +E+P K I
Sbjct: 16 MSLVPMVVEQTNRGERSYDIYSRLLKDRIIFLSGPIDDDVANLVIAQLLFLSAEDPEKDI 75
Query: 92 HMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTI 151
++Y+NSPGG VTAG+ IYDTMQ+I+ ++TIC+G AASMGSLLL +G G+R AL NS +
Sbjct: 76 NLYINSPGGSVTAGMGIYDTMQFIKPDVSTICVGMAASMGSLLLTAGAPGKRYALTNSEV 135
Query: 152 MIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEA 211
MIHQP GG GQA DM IH I++ LN +Y + TGQ +E I+++ DRD+FM EEA
Sbjct: 136 MIHQPLGGIQGQASDMLIHADWIIKTRAKLNQIYVERTGQPLEKIERDTDRDFFMEAEEA 195
Query: 212 KEFGIIDEVIDQRPMAL 228
K +GIID+V+ +P+ L
Sbjct: 196 KAYGIIDQVL-SKPINL 211
>gi|253575671|ref|ZP_04853007.1| clp protease [Paenibacillus sp. oral taxon 786 str. D14]
gi|251845009|gb|EES73021.1| clp protease [Paenibacillus sp. oral taxon 786 str. D14]
Length = 196
Score = 251 bits (642), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 112/192 (58%), Positives = 152/192 (79%)
Query: 32 FSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPI 91
SL+PMV+E ++RGER+YDI+SRLLK+RII ++ I+D+ A++V+AQLLFL +E+P K I
Sbjct: 1 MSLVPMVVEQTNRGERSYDIYSRLLKDRIIFLSNAIDDEVANLVIAQLLFLAAEDPEKDI 60
Query: 92 HMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTI 151
H+Y+NSPGG VTAG+ IYDTMQYI+ ++TIC+G AASMGSLLL +G G+R ALPNS +
Sbjct: 61 HLYINSPGGSVTAGMGIYDTMQYIKPDVSTICVGMAASMGSLLLTAGAPGKRYALPNSEV 120
Query: 152 MIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEA 211
MIHQP GG GQA D+ IH I++ LN +Y + TGQ +E I+++ DRD+FM+ EEA
Sbjct: 121 MIHQPLGGVRGQATDIKIHADWIIKTRQKLNQIYVERTGQPLEKIERDTDRDFFMSAEEA 180
Query: 212 KEFGIIDEVIDQ 223
K +GIID+VI +
Sbjct: 181 KAYGIIDQVISK 192
>gi|254507754|ref|ZP_05119885.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
parahaemolyticus 16]
gi|219549279|gb|EED26273.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
parahaemolyticus 16]
Length = 208
Score = 251 bits (642), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 110/192 (57%), Positives = 150/192 (78%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E +SRGER+YDI+SRLLKER+I + G + D A++VVAQLLFLESENP K I
Sbjct: 15 ALVPMVVEQTSRGERSYDIYSRLLKERVIFLTGQVEDHMANLVVAQLLFLESENPDKDIF 74
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
+Y+NSPGG VTAG++IYDTMQ+I+ ++T+C+GQA SMG+ LLA G G+R LPNS +M
Sbjct: 75 LYINSPGGSVTAGMSIYDTMQFIKPNVSTVCMGQACSMGAFLLAGGAPGKRYVLPNSRVM 134
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQP GG+ GQA D+ IH ++I+ + LN L +HTGQ +EVI+++ DRD FM E+A
Sbjct: 135 IHQPLGGFQGQASDIQIHAQEILTIKQKLNKLLAEHTGQPLEVIERDTDRDNFMAAEQAV 194
Query: 213 EFGIIDEVIDQR 224
E+G++D V+ R
Sbjct: 195 EYGLVDAVLSHR 206
>gi|353228901|emb|CCD75072.1| peptidase Clp (S14 family) [Schistosoma mansoni]
Length = 249
Score = 251 bits (642), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 117/200 (58%), Positives = 153/200 (76%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
LIPMV++ S+ ER YDI+SRLLK+RIIC+ G + D+ A V+AQLLFL+SE+ PIH+
Sbjct: 44 LIPMVLDKSTNVERYYDIYSRLLKDRIICLMGAVTDEMAGSVIAQLLFLQSEDKRTPIHL 103
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VTAGLAIYDTMQ+IR P+ T C+GQA+SMGSLLLA+G+ G R ALP+S+IM+
Sbjct: 104 YINSPGGSVTAGLAIYDTMQFIRPPVATFCIGQASSMGSLLLAAGSHGCRFALPHSSIMV 163
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQPSG GQA D+ I ++++R +N +Y +HT QS EVI+K MDRDYFMT EEA
Sbjct: 164 HQPSGSAHGQASDIKIRAEELIRTRSVINTIYERHTKQSQEVIEKWMDRDYFMTAEEAVS 223
Query: 214 FGIIDEVIDQRPMALVTDAV 233
+GI+D V+ + P V + V
Sbjct: 224 YGIVDRVLHKTPAEKVDEHV 243
>gi|15888940|ref|NP_354621.1| ATP-dependent Clp protease, proteolytic subunit [Agrobacterium
fabrum str. C58]
gi|21759065|sp|Q8UEX6.1|CLPP1_AGRT5 RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|15156717|gb|AAK87406.1| ATP-dependent Clp protease, proteolytic subunit [Agrobacterium
fabrum str. C58]
Length = 202
Score = 251 bits (642), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 110/194 (56%), Positives = 151/194 (77%)
Query: 31 SFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKP 90
+ L+PMV+E SSRGER++DI+SRLL+ERII +NG ++D + +V AQLLFLE+ENP KP
Sbjct: 4 TMQLVPMVVEQSSRGERSFDIYSRLLRERIIFLNGEVDDTVSALVCAQLLFLEAENPKKP 63
Query: 91 IHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNST 150
IH+Y+NSPGG VT+G A+YDTM+YIR+P++T+C+G A SMGS LL +G G R ALPN++
Sbjct: 64 IHLYINSPGGMVTSGFAMYDTMRYIRAPVHTLCMGTARSMGSFLLMAGEPGTRAALPNAS 123
Query: 151 IMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEE 210
I+IHQPSGG+ GQA DM IH ++I + + LY +H G+S E + MDRD FMT +E
Sbjct: 124 ILIHQPSGGFQGQASDMLIHAEEIRQTKHRMTRLYAEHCGRSYEEFETAMDRDRFMTVQE 183
Query: 211 AKEFGIIDEVIDQR 224
A E+G+ID +++ R
Sbjct: 184 ALEWGLIDRILEVR 197
>gi|398345034|ref|ZP_10529737.1| ATP-dependent Clp protease proteolytic subunit [Leptospira inadai
serovar Lyme str. 10]
Length = 198
Score = 251 bits (642), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 112/190 (58%), Positives = 156/190 (82%)
Query: 32 FSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPI 91
S+IP+VIE + RGER+YDI+SRLLK+RII + I+D+ A+VV+AQLLFL++ENP + I
Sbjct: 1 MSVIPVVIEQTGRGERSYDIYSRLLKDRIIFLGNAISDEYANVVIAQLLFLDAENPDRDI 60
Query: 92 HMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTI 151
++Y+NSPGG V++GLAIYDTMQYI++ + T+C+GQA+SM +LLLA G KG+R ALP+S I
Sbjct: 61 YLYINSPGGYVSSGLAIYDTMQYIKADVRTLCVGQASSMAALLLAGGAKGKRSALPHSRI 120
Query: 152 MIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEA 211
M+HQP+GG +GQA D+ I K+++++ + LN LY KHTG+ IE IQK+ +RD +MT EEA
Sbjct: 121 MMHQPTGGATGQASDIAIQAKEVLKLKEILNGLYTKHTGKPIEQIQKDTERDLYMTAEEA 180
Query: 212 KEFGIIDEVI 221
+ +GIID VI
Sbjct: 181 QIYGIIDSVI 190
>gi|392421146|ref|YP_006457750.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
stutzeri CCUG 29243]
gi|390983334|gb|AFM33327.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
stutzeri CCUG 29243]
Length = 212
Score = 251 bits (642), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 112/195 (57%), Positives = 156/195 (80%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
L+PMVIE S+RGERAYDI+SRLLKER+I + G + D A+++VAQ+LFLE+ENP K IH+
Sbjct: 18 LVPMVIEQSARGERAYDIYSRLLKERVIFMVGQVEDYMANLIVAQMLFLEAENPEKDIHL 77
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VTAG++IYDTMQ+I+ ++TIC+GQA SMG+LLL GT G+R LP+S +MI
Sbjct: 78 YINSPGGSVTAGMSIYDTMQFIKPDVSTICIGQACSMGALLLTGGTAGKRYCLPHSRMMI 137
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQP GG+ GQA D+ IH ++I+ + + LN + HTGQ +EVI ++ DRD FM+ E+A +
Sbjct: 138 HQPLGGFQGQASDIEIHAREILTIRERLNKVLAHHTGQPMEVIARDTDRDNFMSGEDAVK 197
Query: 214 FGIIDEVIDQRPMAL 228
+G+ID+V+ QR +A+
Sbjct: 198 YGLIDQVLTQRQLAV 212
>gi|403049603|ref|ZP_10904087.1| ATP-dependent Clp protease, proteolytic subunit ClpP [SAR86 cluster
bacterium SAR86D]
Length = 204
Score = 251 bits (642), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 112/192 (58%), Positives = 154/192 (80%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+LIPMVIE ++RGER++DI+SRLLKER+I ++GP++D ++VVVAQLLFLESENP K I
Sbjct: 7 ALIPMVIEQTARGERSFDIYSRLLKERVIFLSGPVDDYMSNVVVAQLLFLESENPEKDIS 66
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
+Y+NSPGG ++AGLAIYDTMQ++ I+T+C+GQAASMG++LLA G KG+R ALPNS IM
Sbjct: 67 IYINSPGGSISAGLAIYDTMQFVSPTISTLCIGQAASMGAILLAGGNKGKRFALPNSRIM 126
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQP GG+ GQA D IH K+I+ + +N + KHTGQ+I+ I+K+ DRD F+ A
Sbjct: 127 IHQPLGGFQGQASDFEIHAKEILHMKKIVNEILAKHTGQTIKKIEKDTDRDNFLDAPAAI 186
Query: 213 EFGIIDEVIDQR 224
++GI+D +++ R
Sbjct: 187 KYGIVDNILNSR 198
>gi|389578265|ref|ZP_10168292.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Desulfobacter
postgatei 2ac9]
gi|389399900|gb|EIM62122.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Desulfobacter
postgatei 2ac9]
Length = 208
Score = 251 bits (642), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 112/191 (58%), Positives = 152/191 (79%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
LIPMV+E S+RGERAYDI+SRLLK+RII + I+D+ A+++VAQ+LFLESE+P K I+
Sbjct: 3 LIPMVVEQSNRGERAYDIYSRLLKDRIIFLGSAIDDEVANLIVAQMLFLESEDPDKDINF 62
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VTAG+AIYDT+QYI+ + T+C+GQAASMG+LLL +GT G+R ALPN+ IMI
Sbjct: 63 YINSPGGVVTAGMAIYDTIQYIKPDVATVCIGQAASMGALLLTAGTAGKRFALPNARIMI 122
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQP GG GQA D+ I +I+R+ D LN + KHTGQ+IE + + +RD+FM+ ++A E
Sbjct: 123 HQPMGGAQGQATDIKIQATEILRMKDVLNEILSKHTGQNIERVAADTERDFFMSGQQALE 182
Query: 214 FGIIDEVIDQR 224
+GI+D V+ R
Sbjct: 183 YGIVDRVVSDR 193
>gi|209521458|ref|ZP_03270166.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
sp. H160]
gi|209498114|gb|EDZ98261.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
sp. H160]
Length = 217
Score = 251 bits (642), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 112/205 (54%), Positives = 158/205 (77%)
Query: 21 SKPSAQISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLL 80
S+ S + ++ L+P+V+E S RGER+YDI+SRLLKERI+ + G +ND TA++VVAQ+L
Sbjct: 13 SQSSRDLETQALGLVPIVVETSGRGERSYDIYSRLLKERIVFLVGEVNDQTANLVVAQML 72
Query: 81 FLESENPSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTK 140
FLESENP K I+ Y+NSPGG V+AG+AIYDTMQ+I+ ++T+C+G AASMG+ LLA+G K
Sbjct: 73 FLESENPDKDIYFYINSPGGSVSAGMAIYDTMQFIKPDVSTLCMGLAASMGAFLLAAGAK 132
Query: 141 GERRALPNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNM 200
G+R ALPNS +MIHQP GG GQA D+ I ++I+ + D LN L HTGQ +E I ++
Sbjct: 133 GKRFALPNSRVMIHQPLGGARGQASDIEIQAREILYLKDRLNHLLAHHTGQPVERIARDT 192
Query: 201 DRDYFMTPEEAKEFGIIDEVIDQRP 225
DRD FM+ ++A+ +G++D+V +RP
Sbjct: 193 DRDNFMSGDDAQAYGLVDQVAHKRP 217
>gi|449018573|dbj|BAM81975.1| ATP-dependent Clp protease proteolytic subunit [Cyanidioschyzon
merolae strain 10D]
Length = 263
Score = 251 bits (642), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 119/218 (54%), Positives = 160/218 (73%), Gaps = 6/218 (2%)
Query: 24 SAQISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLE 83
+A A L+P+V+E + RGER YDI+SRLL+ERII +NGPI D A +VVAQLL+LE
Sbjct: 48 TAGADAAQAQLVPIVLEQTPRGERVYDIYSRLLRERIIVLNGPITDTVASLVVAQLLYLE 107
Query: 84 SENPSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGER 143
S P+K + MY++SPGG ++AG+AIYDTMQYI +P++T+CLGQA+SM SLLL +G GER
Sbjct: 108 SVAPAKALSMYIHSPGGIISAGMAIYDTMQYISAPVHTVCLGQASSMASLLLCAGEPGER 167
Query: 144 RALPNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRD 203
R LPN+ +MIHQPSG GQA D+ IH +I+ + + L+ LY KHTGQ+ VI M+RD
Sbjct: 168 RCLPNARVMIHQPSGQAGGQASDIAIHANEILFLRERLHELYAKHTGQNKHVIADKMERD 227
Query: 204 YFMTPEEAKEFGIIDEVIDQRPMALVTDAVGREGKEGK 241
+FM+ E AK FG+IDEVI +R DA+ + +E +
Sbjct: 228 HFMSAEAAKAFGLIDEVIYKR------DALKEDKREAR 259
>gi|402822003|ref|ZP_10871512.1| ATP-dependent Clp protease proteolytic subunit [Sphingomonas sp.
LH128]
gi|402264484|gb|EJU14338.1| ATP-dependent Clp protease proteolytic subunit [Sphingomonas sp.
LH128]
Length = 222
Score = 251 bits (642), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 113/193 (58%), Positives = 153/193 (79%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E +SRGER++DI+SRLL+ERI+ I G + D A ++VAQLLFLESENP+K I
Sbjct: 22 ALVPMVVEQTSRGERSFDIYSRLLRERIVFITGQVEDHMASLIVAQLLFLESENPTKDIS 81
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
MY+NSPGG VTAG+AI+DTMQYI+ ++T+C+GQAASMGS LLA+G G R ALPN+ IM
Sbjct: 82 MYINSPGGVVTAGMAIHDTMQYIKPRVSTVCIGQAASMGSFLLAAGEPGMRIALPNARIM 141
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
+HQPSGG G A D+ I ++I+R+ LN LY K+TG+S++ I+K MDRD F+ +EA
Sbjct: 142 VHQPSGGAQGMASDIEIQAREILRMRRRLNDLYVKYTGKSLDEIEKAMDRDTFLEADEAL 201
Query: 213 EFGIIDEVIDQRP 225
FG++D+V + RP
Sbjct: 202 AFGLVDKVFETRP 214
>gi|441506114|ref|ZP_20988091.1| ATP-dependent Clp protease proteolytic subunit [Photobacterium sp.
AK15]
gi|441426253|gb|ELR63738.1| ATP-dependent Clp protease proteolytic subunit [Photobacterium sp.
AK15]
Length = 207
Score = 251 bits (642), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 109/192 (56%), Positives = 152/192 (79%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E +SRGER+YDI+SRLLKER+I + G + D A++VVAQLLFLESENP K I
Sbjct: 15 ALVPMVVEQTSRGERSYDIYSRLLKERVIFLTGQVEDHMANLVVAQLLFLESENPDKDIF 74
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
+Y+NSPGG VTAG++IYDTMQ+I+ ++T+C+GQA SMG+ LLA G +G+R LPNS +M
Sbjct: 75 LYINSPGGSVTAGMSIYDTMQFIKPNVSTVCMGQACSMGAFLLAGGAQGKRYCLPNSRVM 134
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQP GG+ GQA D+ IH ++I+ + LN L +HTGQ +EV++++ DRD FM+ E+A
Sbjct: 135 IHQPLGGFQGQASDIQIHAQEILTIKQKLNNLLAEHTGQPLEVVERDTDRDNFMSAEQAV 194
Query: 213 EFGIIDEVIDQR 224
E+G++D V+ R
Sbjct: 195 EYGLVDAVLRHR 206
>gi|343503058|ref|ZP_08740893.1| ATP-dependent Clp protease proteolytic subunit [Vibrio tubiashii
ATCC 19109]
gi|418480506|ref|ZP_13049564.1| ATP-dependent Clp protease proteolytic subunit [Vibrio tubiashii
NCIMB 1337 = ATCC 19106]
gi|342812728|gb|EGU47720.1| ATP-dependent Clp protease proteolytic subunit [Vibrio tubiashii
ATCC 19109]
gi|384571898|gb|EIF02426.1| ATP-dependent Clp protease proteolytic subunit [Vibrio tubiashii
NCIMB 1337 = ATCC 19106]
Length = 208
Score = 251 bits (642), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 110/189 (58%), Positives = 150/189 (79%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E +SRGER+YDI+SRLLKERII + G + D A++VVAQLLFLESENP K I
Sbjct: 15 ALVPMVVEQTSRGERSYDIYSRLLKERIIFLTGQVEDQMANLVVAQLLFLESENPDKDIF 74
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
+Y+NSPGG VTAG++IYDTMQYI+ ++T+C+GQA SMG+ LLA G G+R LPNS +M
Sbjct: 75 LYINSPGGSVTAGMSIYDTMQYIKPNVSTVCMGQACSMGAFLLAGGAPGKRHVLPNSRVM 134
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQP GG+ GQA D+ IH ++I+ + LN L +HTGQ +EVI+++ DRD FM+ ++A
Sbjct: 135 IHQPLGGFQGQASDIQIHAQEILTIKQKLNKLLAEHTGQPLEVIERDTDRDNFMSSDQAV 194
Query: 213 EFGIIDEVI 221
E+G++D V+
Sbjct: 195 EYGLVDSVL 203
>gi|239815493|ref|YP_002944403.1| ATP-dependent Clp protease proteolytic subunit [Variovorax
paradoxus S110]
gi|259491242|sp|C5CJT4.1|CLPP_VARPS RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|239802070|gb|ACS19137.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Variovorax
paradoxus S110]
Length = 202
Score = 251 bits (642), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 113/195 (57%), Positives = 153/195 (78%)
Query: 30 RSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSK 89
+ +IPMVIE S RGER+YDI+SRLLKERII + G +ND TA++VVAQLLFLESENP K
Sbjct: 7 KGLGMIPMVIEQSGRGERSYDIYSRLLKERIIFLVGEVNDQTANLVVAQLLFLESENPDK 66
Query: 90 PIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNS 149
I Y+NSPGG V+AG+AIYDTMQ+I+ ++T+C+G AASMG+ LLA+G KG+R +LPNS
Sbjct: 67 DISFYINSPGGSVSAGMAIYDTMQFIKPDVSTMCIGFAASMGAFLLAAGEKGKRFSLPNS 126
Query: 150 TIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPE 209
IMIHQ GG GQA D+ IH + I+R D +N + + TGQ +E ++ + +RDYF+T +
Sbjct: 127 KIMIHQVLGGARGQATDIEIHARDILRTKDQMNRILAERTGQPLEKVKSDTERDYFLTAD 186
Query: 210 EAKEFGIIDEVIDQR 224
EAK++G++D+VI +R
Sbjct: 187 EAKDYGLVDQVIAKR 201
>gi|116243153|sp|Q1Q8J2.2|CLPP_PSYCK RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
Length = 215
Score = 251 bits (642), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 110/201 (54%), Positives = 160/201 (79%)
Query: 28 SARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENP 87
SA +L+PMV+E S+RGER++DIFSRLL+ER+I + G + D A+++VAQLLFLE+ENP
Sbjct: 15 SATQAALVPMVVEQSARGERSFDIFSRLLRERVIFLTGQVEDHMANLIVAQLLFLEAENP 74
Query: 88 SKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALP 147
K IH+Y+NSPGG V+AGLAI+DTM +I+ ++TIC+G A SMGS LLA+G KG+R AL
Sbjct: 75 DKDIHLYINSPGGSVSAGLAIFDTMNFIKPEVSTICMGGAYSMGSFLLAAGEKGKRYALA 134
Query: 148 NSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMT 207
N+ +MIHQPSGG GQA D+ I+ ++I++ LN + + TGQ ++ I+K+++RDY++
Sbjct: 135 NARVMIHQPSGGAQGQATDIEINAREILKTRARLNEILAERTGQPVDKIEKDVERDYWLD 194
Query: 208 PEEAKEFGIIDEVIDQRPMAL 228
+EAKE+G+IDEV+++RP +L
Sbjct: 195 AKEAKEYGLIDEVLERRPASL 215
>gi|114569888|ref|YP_756568.1| ATP-dependent Clp protease proteolytic subunit ClpP [Maricaulis
maris MCS10]
gi|122316141|sp|Q0AQ07.1|CLPP_MARMM RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|114340350|gb|ABI65630.1| ATP-dependent Clp protease proteolytic subunit ClpP [Maricaulis
maris MCS10]
Length = 211
Score = 251 bits (642), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 114/192 (59%), Positives = 150/192 (78%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+P+V+E +SRGER++DI+SRLLKERII I GPI D A +++AQLLFLESENP K I
Sbjct: 10 NLVPIVVEQTSRGERSFDIYSRLLKERIIFITGPIEDHMASLIIAQLLFLESENPKKEIS 69
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
MY+NSPGG V+AGL IYDTMQYIRSP++T+CLG AASMGSLLL +G K R A PN+ IM
Sbjct: 70 MYINSPGGVVSAGLGIYDTMQYIRSPVSTMCLGMAASMGSLLLTAGEKDMRFAAPNARIM 129
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
+HQPSGG+ GQA D+ H I ++ LN +Y HTG++ + I+ +DRD FM+ +E
Sbjct: 130 VHQPSGGFRGQASDIERHAADIQKIKRRLNEIYVHHTGRTYDEIESALDRDNFMSAQEGL 189
Query: 213 EFGIIDEVIDQR 224
EFG++D+VI++R
Sbjct: 190 EFGLVDKVIERR 201
>gi|408785157|ref|ZP_11196904.1| ATP-dependent Clp protease proteolytic subunit [Rhizobium lupini
HPC(L)]
gi|408488751|gb|EKJ97058.1| ATP-dependent Clp protease proteolytic subunit [Rhizobium lupini
HPC(L)]
Length = 202
Score = 251 bits (642), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 112/191 (58%), Positives = 148/191 (77%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
L+PMV+E SSRGER++DI+SRLL+ERII +NG +ND + +V AQLLFLE+ENP KPIH+
Sbjct: 7 LVPMVVEQSSRGERSFDIYSRLLRERIIFLNGEVNDAVSALVCAQLLFLEAENPKKPIHL 66
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VT+GLA+YDTM YIR+P++T+C+G A SMGS LL +G GER ALPN++I I
Sbjct: 67 YINSPGGVVTSGLAMYDTMHYIRAPVHTLCMGTARSMGSFLLMAGEPGERTALPNASIHI 126
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQP GG+ GQA DM IH +++ + + LY +H QS E + MDRD+FMT E+A E
Sbjct: 127 HQPMGGFQGQASDMLIHAEEMQQTKHRMTRLYAEHCKQSYEKFEAAMDRDFFMTAEQALE 186
Query: 214 FGIIDEVIDQR 224
+G+ID V+ R
Sbjct: 187 WGLIDRVLGVR 197
>gi|422016474|ref|ZP_16363057.1| ATP-dependent Clp protease proteolytic subunit [Providencia
burhodogranariea DSM 19968]
gi|414092673|gb|EKT54346.1| ATP-dependent Clp protease proteolytic subunit [Providencia
burhodogranariea DSM 19968]
Length = 206
Score = 251 bits (642), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 110/196 (56%), Positives = 153/196 (78%)
Query: 29 ARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPS 88
A +L+PMVIE +SRGER+YDI+SRLLKERII + G + D A+++VAQ+LFLE+ENP
Sbjct: 11 ASQMALVPMVIEQTSRGERSYDIYSRLLKERIIFLTGQVEDHMANLIVAQMLFLEAENPE 70
Query: 89 KPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPN 148
K I +Y+NSPGG +TAG++IYDTMQ+I+ ++TIC+GQA SMG+ LL +GTKG+R LPN
Sbjct: 71 KDIQLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQACSMGAFLLTAGTKGKRFCLPN 130
Query: 149 STIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTP 208
S +MIHQP GGY GQA D+ IH ++I++V +N L HTG+SIE I ++ +RD F++
Sbjct: 131 SRVMIHQPLGGYQGQATDIEIHAQEILKVKSRMNELMALHTGKSIEEINRDTERDRFLSA 190
Query: 209 EEAKEFGIIDEVIDQR 224
EAKE+G++D++ R
Sbjct: 191 NEAKEYGLVDQIYTSR 206
>gi|399924495|ref|ZP_10781853.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Peptoniphilus
rhinitidis 1-13]
Length = 194
Score = 251 bits (642), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 112/193 (58%), Positives = 156/193 (80%)
Query: 32 FSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPI 91
+L+PMV+E ++RGER+YDI+SRLLK+RII +G +ND A ++VAQLLFLESE+P+K I
Sbjct: 1 MALVPMVVEQTNRGERSYDIYSRLLKDRIIFASGEVNDAMADLIVAQLLFLESEDPNKDI 60
Query: 92 HMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTI 151
+Y+NSPGG V+AG AIYDTM YI+ ++TIC+G AASMG+ LLASG KG+R ALPNS I
Sbjct: 61 QLYINSPGGSVSAGFAIYDTMNYIKPDVSTICIGMAASMGAFLLASGAKGKRFALPNSDI 120
Query: 152 MIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEA 211
MIHQPSGG GQA D+ I+ ++I+++ LN + TGQ +E I+++ DRDY+++ EEA
Sbjct: 121 MIHQPSGGAQGQASDIQINAEKILKIRHKLNEILSDRTGQPLEKIERDTDRDYWLSSEEA 180
Query: 212 KEFGIIDEVIDQR 224
K++G+ID+VI++R
Sbjct: 181 KKYGLIDKVIEKR 193
>gi|189424987|ref|YP_001952164.1| ATP-dependent Clp protease proteolytic subunit ClpP [Geobacter
lovleyi SZ]
gi|226706453|sp|B3E1Z4.1|CLPP_GEOLS RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|189421246|gb|ACD95644.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Geobacter
lovleyi SZ]
Length = 197
Score = 251 bits (642), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 111/191 (58%), Positives = 154/191 (80%)
Query: 35 IPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHMY 94
+PMV+E S RGERAYDI+SRLLKERI+ + G IND A +V+AQLLFLE+E+P K IH+Y
Sbjct: 3 VPMVVEQSGRGERAYDIYSRLLKERIVFLGGEINDQVADLVIAQLLFLEAEDPDKDIHLY 62
Query: 95 LNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMIH 154
+NSPGG VTAG+AI+DTM YI++P++TIC+GQAASMG++LL +G KG+R ALP++ IMIH
Sbjct: 63 INSPGGVVTAGMAIFDTMNYIKAPVSTICIGQAASMGAVLLTAGEKGKRFALPHARIMIH 122
Query: 155 QPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKEF 214
QPSGG GQA D+ I ++I+R+ LN L +GQ +E ++++ +RD+FM+ EEA+ +
Sbjct: 123 QPSGGSRGQATDIMIQAEEILRMKRELNRLLADLSGQPVERLEQDTERDFFMSAEEARNY 182
Query: 215 GIIDEVIDQRP 225
G+ID V+ +RP
Sbjct: 183 GLIDAVMTRRP 193
>gi|170692395|ref|ZP_02883558.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
graminis C4D1M]
gi|307729638|ref|YP_003906862.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
sp. CCGE1003]
gi|323526047|ref|YP_004228200.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
sp. CCGE1001]
gi|170142825|gb|EDT10990.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
graminis C4D1M]
gi|307584173|gb|ADN57571.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
sp. CCGE1003]
gi|323383049|gb|ADX55140.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
sp. CCGE1001]
Length = 217
Score = 251 bits (642), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 112/205 (54%), Positives = 159/205 (77%)
Query: 21 SKPSAQISARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLL 80
S+ S + A++ L+P+V+E S RGER+YDI+SRLLKERI+ + G +ND TA++VVAQ+L
Sbjct: 13 SQSSRDLEAQALGLVPIVVETSGRGERSYDIYSRLLKERIVFLVGEVNDQTANLVVAQML 72
Query: 81 FLESENPSKPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTK 140
FLESENP K I+ Y+NSPGG V+AG+AIYDTMQ+I+ ++T+C+G AASMG+ LLA+G K
Sbjct: 73 FLESENPDKDIYFYINSPGGSVSAGMAIYDTMQFIKPDVSTLCMGLAASMGAFLLAAGAK 132
Query: 141 GERRALPNSTIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNM 200
G+R ALPNS +MIHQP GG GQA D+ I ++I+ + + LN L HTGQ +E I ++
Sbjct: 133 GKRFALPNSRVMIHQPLGGARGQASDIEIQAREILYLKERLNHLLAHHTGQPVERIARDT 192
Query: 201 DRDYFMTPEEAKEFGIIDEVIDQRP 225
DRD FM+ ++A+ +G++D+V +RP
Sbjct: 193 DRDNFMSGDDAQAYGLVDQVAHKRP 217
>gi|284047883|ref|YP_003398222.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Acidaminococcus fermentans DSM 20731]
gi|283952104|gb|ADB46907.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Acidaminococcus fermentans DSM 20731]
Length = 197
Score = 251 bits (642), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 111/192 (57%), Positives = 154/192 (80%)
Query: 32 FSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPI 91
S +P+V+E +S+GER+YDI+SRLLK+RII + G I D A++++AQLLFLESE+P K +
Sbjct: 1 MSYVPIVVEQTSKGERSYDIYSRLLKDRIIFVTGEIEDHMANLIIAQLLFLESEDPDKDV 60
Query: 92 HMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTI 151
H+Y+NSPGG V+AGLAIYDTMQYIR ++TIC+G AASM S+LLA+GTKG+R ALP+S +
Sbjct: 61 HLYINSPGGSVSAGLAIYDTMQYIRPDVSTICVGMAASMASVLLAAGTKGKRYALPHSRV 120
Query: 152 MIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEA 211
MIHQP GG GQA D+ IH ++I+R+ + +N + HTGQ+ E I+ + +RD+FMT EEA
Sbjct: 121 MIHQPLGGAQGQATDIEIHAREILRIREEMNQILASHTGQTPEQIRLDTERDHFMTAEEA 180
Query: 212 KEFGIIDEVIDQ 223
+G+ID+V+ Q
Sbjct: 181 ANYGLIDQVVHQ 192
>gi|15641924|ref|NP_231556.1| ATP-dependent Clp protease proteolytic subunit [Vibrio cholerae O1
biovar El Tor str. N16961]
gi|147674197|ref|YP_001217455.1| ATP-dependent Clp protease proteolytic subunit [Vibrio cholerae
O395]
gi|153824129|ref|ZP_01976796.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae B33]
gi|153826398|ref|ZP_01979065.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae MZO-2]
gi|227082052|ref|YP_002810603.1| ATP-dependent Clp protease proteolytic subunit [Vibrio cholerae
M66-2]
gi|227118370|ref|YP_002820266.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae O395]
gi|254286858|ref|ZP_04961810.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae AM-19226]
gi|18203199|sp|Q9KQS6.1|CLPP_VIBCH RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|172047646|sp|A5F6X0.1|CLPP_VIBC3 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|254763808|sp|C3LNM6.1|CLPP_VIBCM RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|9656458|gb|AAF95070.1| ATP-dependent Clp protease, proteolytic subunit [Vibrio cholerae O1
biovar El Tor str. N16961]
gi|126518348|gb|EAZ75571.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae B33]
gi|146316080|gb|ABQ20619.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae O395]
gi|149739876|gb|EDM54067.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae MZO-2]
gi|150423008|gb|EDN14957.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae AM-19226]
gi|227009940|gb|ACP06152.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae M66-2]
gi|227013820|gb|ACP10030.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae O395]
Length = 200
Score = 251 bits (641), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 110/192 (57%), Positives = 152/192 (79%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E +SRGER+YDI+SRLLKER+I + G + D A++VVAQLLFLESENP K I
Sbjct: 7 ALVPMVVEQTSRGERSYDIYSRLLKERVIFLTGQVEDHMANLVVAQLLFLESENPDKDIF 66
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
+Y+NSPGG VTAG++IYDTMQ+I+ ++T+C+GQA SMG+ LLA G G+R LPNS +M
Sbjct: 67 LYINSPGGSVTAGMSIYDTMQFIKPNVSTVCMGQACSMGAFLLAGGAPGKRYVLPNSRVM 126
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQP GG+ GQA D+ IH ++I+ + + LN L +HTGQ IEVI+++ DRD FM+ ++A
Sbjct: 127 IHQPLGGFQGQASDIQIHAQEILTIKNKLNRLLAEHTGQPIEVIERDTDRDNFMSADQAV 186
Query: 213 EFGIIDEVIDQR 224
E+G++D V+ R
Sbjct: 187 EYGLVDAVLKHR 198
>gi|307129927|ref|YP_003881943.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Dickeya dadantii 3937]
gi|306527456|gb|ADM97386.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Dickeya dadantii 3937]
Length = 207
Score = 251 bits (641), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 108/196 (55%), Positives = 155/196 (79%)
Query: 29 ARSFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPS 88
A +L+PMV+E +SRGER+YDI+SRLLKER+I + G + D A+++VAQ+LFLE+ENP
Sbjct: 11 APHMALVPMVVEQTSRGERSYDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPE 70
Query: 89 KPIHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPN 148
K I++Y+NSPGG +TAG++IYDTMQ+I+ ++TIC+GQAASMG+ LL +GTKG+R LPN
Sbjct: 71 KDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGTKGKRFCLPN 130
Query: 149 STIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTP 208
S +MIHQP GG+ GQA D+ IH K+I++V +N L KHTGQ +E I+++ +RD F++
Sbjct: 131 SRVMIHQPLGGFQGQATDIEIHAKEILKVKARMNELMAKHTGQPLEAIERDTERDRFLSA 190
Query: 209 EEAKEFGIIDEVIDQR 224
EA ++G++D V+ R
Sbjct: 191 AEAVDYGLVDSVLTHR 206
>gi|13470920|ref|NP_102489.1| ATP-dependent protease proteolytic subunit ClpP-like protein
[Mesorhizobium loti MAFF303099]
gi|18202652|sp|Q98M38.1|CLPP1_RHILO RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|14021663|dbj|BAB48275.1| ATP-dependent protease proteolytic subunit ClpP-like protein
[Mesorhizobium loti MAFF303099]
Length = 201
Score = 251 bits (641), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 115/195 (58%), Positives = 149/195 (76%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
SL+PMVIE SSRGERA+DIFSRLL+ERII ING INDD + +V AQLL LES+NP K I
Sbjct: 6 SLVPMVIEQSSRGERAFDIFSRLLRERIIFINGEINDDVSALVCAQLLSLESDNPDKEIS 65
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
+Y+NSPGG VT+G AIYDTMQY+ P++T+C+G AASMGS LL +GT G R ALPN+TI+
Sbjct: 66 LYINSPGGVVTSGFAIYDTMQYVSCPVSTVCMGFAASMGSFLLMAGTPGRRIALPNATIL 125
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
+HQP GG+ GQA D+ H ++I + + LY +H G+S E +++ +DRD+FMT EA+
Sbjct: 126 LHQPLGGFQGQASDIQRHAERIGKTKQRMAELYAQHCGRSYEEVERTLDRDHFMTAREAQ 185
Query: 213 EFGIIDEVIDQRPMA 227
+GI+D V D R A
Sbjct: 186 TWGIVDHVFDTRKKA 200
>gi|449304294|gb|EMD00302.1| hypothetical protein BAUCODRAFT_30779 [Baudoinia compniacensis UAMH
10762]
Length = 255
Score = 251 bits (641), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 117/196 (59%), Positives = 151/196 (77%), Gaps = 6/196 (3%)
Query: 35 IPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHMY 94
+P V E G YDIFSRLLKERIIC+NG + + ++ +VAQLLFLE+E+PSKPI++Y
Sbjct: 53 LPFVTETVGGGWHTYDIFSRLLKERIICLNGEVEETSSASIVAQLLFLEAEDPSKPINLY 112
Query: 95 LNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMIH 154
+NSPGG VTAGLAIYDTMQYIRSP+ TIC+GQAASMGSLLL G KG R LP+S IM+H
Sbjct: 113 INSPGGSVTAGLAIYDTMQYIRSPVTTICMGQAASMGSLLLCGGAKGSRHCLPHSRIMVH 172
Query: 155 QPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHT------GQSIEVIQKNMDRDYFMTP 208
Q SGGY GQA D+ IH K+I+RV + LN +Y +H +S+E I + M+RD+FM+
Sbjct: 173 QVSGGYHGQASDIAIHAKEILRVREQLNQIYQRHLTPKEGGTKSLEEIARVMERDFFMSA 232
Query: 209 EEAKEFGIIDEVIDQR 224
EEA ++GI+D+V+D+R
Sbjct: 233 EEALDWGIVDKVLDRR 248
>gi|425744509|ref|ZP_18862565.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Acinetobacter baumannii WC-323]
gi|425490664|gb|EKU56960.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Acinetobacter baumannii WC-323]
Length = 201
Score = 251 bits (641), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 107/193 (55%), Positives = 153/193 (79%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+P+V+E SSRGER++DIFSRLL+ER+I + G + D+ A+++VAQ+LFLE+ENP K IH
Sbjct: 9 ALVPVVVEQSSRGERSFDIFSRLLRERVIFLTGEVEDNMANLIVAQMLFLEAENPEKDIH 68
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
+Y+NSPGG VTAG+AIYDTMQ+I+ + T C+GQAASMG+ LL +G KG+R L N+ +M
Sbjct: 69 LYINSPGGSVTAGMAIYDTMQFIKPDVVTYCMGQAASMGAFLLNAGAKGKRYCLENARVM 128
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQP GG+ GQA D+ IH ++I+ + + LN L +H+GQ E + ++ DRD FMT + AK
Sbjct: 129 IHQPLGGFRGQASDIEIHAREILFIKERLNRLMAEHSGQDYETVARDTDRDNFMTAQAAK 188
Query: 213 EFGIIDEVIDQRP 225
E+G++DEV+ +RP
Sbjct: 189 EYGLVDEVLSKRP 201
>gi|374705740|ref|ZP_09712610.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas sp. S9]
Length = 213
Score = 251 bits (641), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 112/193 (58%), Positives = 150/193 (77%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
L+PMV+E S+RGERAYDI+SRLLKER+I + GP+ D A++V AQLLFLE+ENP K IH+
Sbjct: 19 LVPMVVEQSARGERAYDIYSRLLKERVIFLIGPVEDYMANLVAAQLLFLEAENPDKDIHL 78
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VTAG++IYDTMQ+I+ ++T C+GQA SMG+ LLA G G+R LPNS +MI
Sbjct: 79 YINSPGGSVTAGMSIYDTMQFIKPDVSTTCIGQACSMGAFLLAGGAPGKRHCLPNSRMMI 138
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQP GG+ GQA D+ IH K+I+ + LN L HTGQ++E I+++ +RD FM+ E A E
Sbjct: 139 HQPLGGFQGQASDIDIHAKEILHIRHRLNTLLAHHTGQTLETIERDTERDNFMSAERAAE 198
Query: 214 FGIIDEVIDQRPM 226
+G+ID V+ +R M
Sbjct: 199 YGLIDSVMMKRDM 211
>gi|433775203|ref|YP_007305670.1| protease subunit of ATP-dependent protease [Mesorhizobium
australicum WSM2073]
gi|433667218|gb|AGB46294.1| protease subunit of ATP-dependent protease [Mesorhizobium
australicum WSM2073]
Length = 201
Score = 251 bits (641), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 114/195 (58%), Positives = 149/195 (76%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
SL+PMVIE SSRGERA+DIFSRLL+ERI+ +NG INDD + +V AQLL LES+NP K I
Sbjct: 6 SLVPMVIEQSSRGERAFDIFSRLLRERIVFVNGEINDDVSALVCAQLLSLESDNPEKEIS 65
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
+Y+NSPGG VT+G AIYDTMQYI P++T+C+G AASMGS LL +GT G R ALPN+TI+
Sbjct: 66 LYINSPGGMVTSGFAIYDTMQYISCPVSTVCMGFAASMGSFLLMAGTAGRRIALPNATIL 125
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
+HQP GG+ GQA D+ H ++I + + LY +H G+S E +++ +DRD+FMT EA+
Sbjct: 126 LHQPLGGFQGQASDIQRHAERIGQTKRHMTELYAQHCGRSYEDVERTLDRDHFMTAREAQ 185
Query: 213 EFGIIDEVIDQRPMA 227
+GI+D V D R A
Sbjct: 186 AWGIVDHVFDTRKKA 200
>gi|404330109|ref|ZP_10970557.1| ATP-dependent Clp protease proteolytic subunit [Sporolactobacillus
vineae DSM 21990 = SL153]
Length = 194
Score = 251 bits (641), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 114/188 (60%), Positives = 151/188 (80%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
LIP VIE ++RGERAYDI+SRLLK+RII + I+D+ A+ VVAQLLFL +E+ K I +
Sbjct: 3 LIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANAVVAQLLFLAAEDSEKDISL 62
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG +TAG+AIYDTMQYI+ ++TIC+G AASMGS LL +G KG+R ALPNS IMI
Sbjct: 63 YINSPGGSITAGMAIYDTMQYIKPKVSTICIGMAASMGSFLLMAGEKGKRYALPNSEIMI 122
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQPSGG GQA DM IH K+I+++ + LN +Y + TGQ EVI+++ +RD FM+ EEAK+
Sbjct: 123 HQPSGGMQGQASDMEIHAKRILQIREKLNHIYAERTGQPFEVIERDTNRDNFMSAEEAKK 182
Query: 214 FGIIDEVI 221
+G+IDE++
Sbjct: 183 YGLIDEIL 190
>gi|431806262|ref|YP_007233163.1| ATP-dependent Clp protease proteolytic subunit [Liberibacter
crescens BT-1]
gi|430800237|gb|AGA64908.1| ATP-dependent Clp protease proteolytic subunit [Liberibacter
crescens BT-1]
Length = 209
Score = 251 bits (641), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 115/194 (59%), Positives = 154/194 (79%)
Query: 31 SFSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKP 90
+ +++P+VIE ++RGER+YDI+SRLLK+RII I GPI D + +V AQLLFLESEN SK
Sbjct: 13 TMAVVPVVIEQTNRGERSYDIYSRLLKDRIIFITGPIEDYISALVCAQLLFLESENCSKE 72
Query: 91 IHMYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNST 150
I MY+NSPGG VTAGLAIYDTMQ+IRSPI+T C+GQAASMGSLLL++G KG R LPN+
Sbjct: 73 ISMYINSPGGAVTAGLAIYDTMQFIRSPISTFCIGQAASMGSLLLSAGEKGHRYVLPNAR 132
Query: 151 IMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEE 210
IM+HQPSGG++GQA D+ HT+ I+ V L+ +Y KH ++ E ++ +DRD FM+ EE
Sbjct: 133 IMVHQPSGGFAGQASDIARHTRDILDVKHRLHQIYVKHCERTYEEVKSTLDRDSFMSAEE 192
Query: 211 AKEFGIIDEVIDQR 224
A E+G++D+++ R
Sbjct: 193 ACEWGLVDKILVSR 206
>gi|424910425|ref|ZP_18333802.1| protease subunit of ATP-dependent protease [Rhizobium leguminosarum
bv. viciae USDA 2370]
gi|392846456|gb|EJA98978.1| protease subunit of ATP-dependent protease [Rhizobium leguminosarum
bv. viciae USDA 2370]
Length = 202
Score = 251 bits (641), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 112/191 (58%), Positives = 148/191 (77%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
L+PMV+E SSRGER++DI+SRLL+ERII +NG +ND + +V AQLLFLE+ENP KPIH+
Sbjct: 7 LVPMVVEQSSRGERSFDIYSRLLRERIIFLNGEVNDAVSALVCAQLLFLEAENPKKPIHL 66
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG VT+GLA+YDTM YIR+P++T+C+G A SMGS LL +G GER ALPN++I I
Sbjct: 67 YINSPGGVVTSGLAMYDTMHYIRAPVHTLCMGTARSMGSFLLMAGEPGERTALPNASIHI 126
Query: 154 HQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAKE 213
HQP GG+ GQA DM IH +++ + + LY +H QS E + MDRD+FMT E+A E
Sbjct: 127 HQPLGGFQGQASDMLIHAEEMQQTKHRMTRLYAEHCKQSYEKFEAAMDRDFFMTAEQALE 186
Query: 214 FGIIDEVIDQR 224
+G+ID V+ R
Sbjct: 187 WGLIDRVLGVR 197
>gi|392427640|ref|YP_006468634.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Desulfosporosinus acidiphilus SJ4]
gi|391357603|gb|AFM43302.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Desulfosporosinus acidiphilus SJ4]
Length = 207
Score = 251 bits (641), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 110/193 (56%), Positives = 156/193 (80%), Gaps = 3/193 (1%)
Query: 34 LIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIHM 93
L+PMV+E ++RGER+YDI+SRLLK+RII + G I+DD A++VVAQ+LFLE+E+P K I++
Sbjct: 4 LVPMVVEQTNRGERSYDIYSRLLKDRIIFLGGGIDDDVANLVVAQMLFLEAEDPEKDINL 63
Query: 94 YLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIMI 153
Y+NSPGG +TAG+AIYDTMQYIRS + TIC+G AASMG+ LLA+G KG+R ALPNS ++I
Sbjct: 64 YINSPGGSITAGMAIYDTMQYIRSDVRTICIGMAASMGAFLLAAGAKGKRVALPNSEVLI 123
Query: 154 HQP---SGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEE 210
HQP G SGQA ++ IH KQ++R +N + TGQ +E I+++ DRDY+M+ EE
Sbjct: 124 HQPLIGGHGLSGQATEIEIHAKQLLRTKSKMNQILAAKTGQPLEKIERDTDRDYYMSAEE 183
Query: 211 AKEFGIIDEVIDQ 223
AKE+G++D+++++
Sbjct: 184 AKEYGLVDQILEK 196
>gi|335041121|ref|ZP_08534237.1| ATP-dependent Clp protease proteolytic subunit [Caldalkalibacillus
thermarum TA2.A1]
gi|334178919|gb|EGL81568.1| ATP-dependent Clp protease proteolytic subunit [Caldalkalibacillus
thermarum TA2.A1]
Length = 196
Score = 251 bits (641), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 113/189 (59%), Positives = 150/189 (79%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+LIP V+E ++RGERAYDI+SRLLK+RII + PI+D A+ V+AQLLFL +E+P K +
Sbjct: 2 NLIPYVVEQTNRGERAYDIYSRLLKDRIIFLGTPIDDHVANSVIAQLLFLAAEDPEKDVS 61
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
+Y+NSPGG VTAGLAIYDTMQYI+ ++TIC+G AASMGS LLA+G KG+R ALPNS IM
Sbjct: 62 LYINSPGGSVTAGLAIYDTMQYIKPDVSTICVGLAASMGSFLLAAGAKGKRFALPNSEIM 121
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
+HQP GG GQA D+ IH I++ LN +Y + TGQ +E I+++ DRD+FM+ EEAK
Sbjct: 122 MHQPLGGVKGQAADIKIHADWIIKTKQKLNRIYAERTGQPVEKIERDTDRDFFMSAEEAK 181
Query: 213 EFGIIDEVI 221
E+G++D+VI
Sbjct: 182 EYGLVDQVI 190
>gi|389703171|ref|ZP_10185465.1| ATP-dependent Clp protease proteolytic subunit [Acinetobacter sp.
HA]
gi|388611574|gb|EIM40674.1| ATP-dependent Clp protease proteolytic subunit [Acinetobacter sp.
HA]
Length = 201
Score = 251 bits (641), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 106/193 (54%), Positives = 154/193 (79%)
Query: 33 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTAHVVVAQLLFLESENPSKPIH 92
+L+PMV+E SSRGER++DI+SRLL+ER+I + G + D+ A+++VAQ+LFLE+ENP K IH
Sbjct: 9 ALVPMVVEQSSRGERSFDIYSRLLRERVIFLTGEVEDNMANLIVAQMLFLEAENPDKDIH 68
Query: 93 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLASGTKGERRALPNSTIM 152
+Y+NSPGG VTAG+AIYDTMQ+I+ + T C+GQAASMG+ LL +G KG+R L N+ +M
Sbjct: 69 LYINSPGGSVTAGMAIYDTMQFIKPDVVTYCMGQAASMGAFLLNAGAKGKRYCLENARVM 128
Query: 153 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNALYCKHTGQSIEVIQKNMDRDYFMTPEEAK 212
IHQP GG+ GQA D+ IH ++I+ + + LN L +H+GQ + + ++ DRD FMT ++AK
Sbjct: 129 IHQPLGGFKGQASDIEIHAREILFIRERLNRLMAEHSGQDFDKVARDTDRDNFMTAQQAK 188
Query: 213 EFGIIDEVIDQRP 225
E+G++DEV+ +RP
Sbjct: 189 EYGLVDEVLTKRP 201
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.132 0.374
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,699,082,779
Number of Sequences: 23463169
Number of extensions: 147630601
Number of successful extensions: 366263
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 6446
Number of HSP's successfully gapped in prelim test: 867
Number of HSP's that attempted gapping in prelim test: 356548
Number of HSP's gapped (non-prelim): 7407
length of query: 249
length of database: 8,064,228,071
effective HSP length: 139
effective length of query: 110
effective length of database: 9,097,814,876
effective search space: 1000759636360
effective search space used: 1000759636360
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 75 (33.5 bits)