BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 025671
(249 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|359495735|ref|XP_003635074.1| PREDICTED: uncharacterized protein LOC100855146 [Vitis vinifera]
Length = 251
Score = 345 bits (886), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 173/246 (70%), Positives = 196/246 (79%), Gaps = 6/246 (2%)
Query: 10 FSPPPSSMLSRT--QFSFTHKPTFLLSSKKESFFTLRASAADNGAGVSAPAVTVE----E 63
FSPP + L + +FT KP+ L SKK L A A +NGAG S A TVE E
Sbjct: 6 FSPPIPTHLPTLSPKPNFTLKPSLFLRSKKHQLLLLSAKATENGAGTSTSATTVEPEKAE 65
Query: 64 PKVREASEGPTESNGAVEAPEVKAVNKFEDPKWVNGTWDLKQFQKNGQTDWDAVIDAEAR 123
K EA+ ++ NGA A +V V KFED KWV GTWDLKQF+ +G+T+WDAVIDAE R
Sbjct: 66 EKAPEAAVLDSQPNGAAAAGDVVLVTKFEDLKWVGGTWDLKQFETDGKTNWDAVIDAEVR 125
Query: 124 RRKWLENSPESSSNDDPVIFDTSIVPWWAWIKRFHLPEAELLNGRAAMIGFFMAYLVDSL 183
RRKWLE++PESSSNDDPV+FDTSI+PWWAWIKRFHLPEAELLNGRAAMIGFFMAYLVDSL
Sbjct: 126 RRKWLEDNPESSSNDDPVVFDTSIIPWWAWIKRFHLPEAELLNGRAAMIGFFMAYLVDSL 185
Query: 184 TGVGLVDQMSNFFCKTLLFVAVVGVLLIRKNEDIETLKKLLEETTFYDKQWQATWQDETT 243
TGVGLVDQM NFFCKTLLFVAVVGVLLIRKNED+ETLKKL++ETTFYDKQWQA+WQDET
Sbjct: 186 TGVGLVDQMGNFFCKTLLFVAVVGVLLIRKNEDLETLKKLVDETTFYDKQWQASWQDETP 245
Query: 244 SGAKKE 249
S +K +
Sbjct: 246 SSSKND 251
>gi|255566759|ref|XP_002524363.1| transcription factor, putative [Ricinus communis]
gi|223536324|gb|EEF37974.1| transcription factor, putative [Ricinus communis]
Length = 259
Score = 342 bits (878), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 176/259 (67%), Positives = 201/259 (77%), Gaps = 14/259 (5%)
Query: 4 SIDLLSFSPPPSSMLSRTQFSFTH---KPTFLLSSKKESF-FTLRASAADNGAGVSAPAV 59
SI + FSPPP+ L R+ S H KPT L+ F F+ ++ DNGAG+SA A
Sbjct: 2 SISMALFSPPPTQFL-RSLSSKPHLLTKPTSFLTPINPPFLFSAPKASTDNGAGISAAAA 60
Query: 60 TVEEPKVRE---------ASEGPTESNGAVEAPEVKAVNKFEDPKWVNGTWDLKQFQKNG 110
VEEPK E A E SNGAV+ EVK +KF DP+W+ GTWDLKQFQK+G
Sbjct: 61 AVEEPKEAEPKAAEPSPAAVESSLGSNGAVKDAEVKLESKFVDPRWIGGTWDLKQFQKDG 120
Query: 111 QTDWDAVIDAEARRRKWLENSPESSSNDDPVIFDTSIVPWWAWIKRFHLPEAELLNGRAA 170
TDWD+VIDAE RRRKWLE++PESS+NDDPV+FDTSI+PWWAW+KRFHLPEAELLNGRAA
Sbjct: 121 STDWDSVIDAEVRRRKWLESNPESSTNDDPVVFDTSIIPWWAWMKRFHLPEAELLNGRAA 180
Query: 171 MIGFFMAYLVDSLTGVGLVDQMSNFFCKTLLFVAVVGVLLIRKNEDIETLKKLLEETTFY 230
M+GFFMAY VDSLTGVGLVDQM NFFCKTLLF+AV GVLLIRKNEDIETLKKL++ETTFY
Sbjct: 181 MVGFFMAYFVDSLTGVGLVDQMGNFFCKTLLFIAVAGVLLIRKNEDIETLKKLVDETTFY 240
Query: 231 DKQWQATWQDETTSGAKKE 249
DKQWQATWQDET S +K E
Sbjct: 241 DKQWQATWQDETPSSSKTE 259
>gi|224126625|ref|XP_002329601.1| light harvesting-like protein 3 [Populus trichocarpa]
gi|222870310|gb|EEF07441.1| light harvesting-like protein 3 [Populus trichocarpa]
Length = 258
Score = 340 bits (872), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 174/261 (66%), Positives = 203/261 (77%), Gaps = 15/261 (5%)
Query: 1 MSTSIDLLSFSPPPSSMLSRTQFSFTHKPTFLLSSKKESFF--TLRASAADNGAGVSAPA 58
MS S+ L S PP + ++ FT+K T L F T +AS + GAGVSA A
Sbjct: 1 MSISMSLFS---PPLTRFPPSKPHFTYKSTLSLGPTNRPFLLSTPKASTDNGGAGVSASA 57
Query: 59 VTVEEPKVREASEGPTES--------NGAVEA--PEVKAVNKFEDPKWVNGTWDLKQFQK 108
TVEEPK+ + + ++S NGAV A E V+KF DP+W++GTWDLKQFQK
Sbjct: 58 ATVEEPKLEQKTPESSDSVPVAKNSSNGAVAAGGEEKVEVSKFGDPRWISGTWDLKQFQK 117
Query: 109 NGQTDWDAVIDAEARRRKWLENSPESSSNDDPVIFDTSIVPWWAWIKRFHLPEAELLNGR 168
+G+TDWDAVIDAEARRRKWL+ +PESSSN+DPV+FDTSI+PWW W+KRFHLPEAELLNGR
Sbjct: 118 DGKTDWDAVIDAEARRRKWLQCNPESSSNNDPVVFDTSIIPWWTWMKRFHLPEAELLNGR 177
Query: 169 AAMIGFFMAYLVDSLTGVGLVDQMSNFFCKTLLFVAVVGVLLIRKNEDIETLKKLLEETT 228
AAMIGFFMAYLVDSLTGVGLVDQMSNFFCKTLLFVAVVGVLLIRKNED+ET+KKLLEETT
Sbjct: 178 AAMIGFFMAYLVDSLTGVGLVDQMSNFFCKTLLFVAVVGVLLIRKNEDLETIKKLLEETT 237
Query: 229 FYDKQWQATWQDETTSGAKKE 249
FYDKQWQATWQDE ++ K +
Sbjct: 238 FYDKQWQATWQDEKSTSPKDD 258
>gi|224137948|ref|XP_002326480.1| light harvesting-like protein 3 [Populus trichocarpa]
gi|118482026|gb|ABK92944.1| unknown [Populus trichocarpa]
gi|222833802|gb|EEE72279.1| light harvesting-like protein 3 [Populus trichocarpa]
Length = 257
Score = 339 bits (870), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 178/262 (67%), Positives = 204/262 (77%), Gaps = 25/262 (9%)
Query: 8 LSFSPPPSSMLSRTQFSFTHK------PTFLLSSKKESFF--TLRASAADNGAGVSAPAV 59
+S PPP L+R SF+ K PT L F T +AS D GAGVSA +
Sbjct: 1 MSLFPPP---LTRLPLSFSSKHHIIFKPTLSLRPTSPPFLLSTSKASTDDGGAGVSASSA 57
Query: 60 TVEEPKVREASEGPTES--------NGAVEAP----EVKAVNKFEDPKWVNGTWDLKQFQ 107
TVEEPK+ + + +ES NGAV AP EV+ V+KFEDP+W++GTWDLKQF+
Sbjct: 58 TVEEPKLEQKAPDSSESVPVAEKNSNGAV-APGGGVEVE-VSKFEDPRWISGTWDLKQFE 115
Query: 108 KNGQTDWDAVIDAEARRRKWLENSPESSSNDDPVIFDTSIVPWWAWIKRFHLPEAELLNG 167
K+G+TDWDAVIDAE RRRKWLE +PESSSNDDPV+FDTSI+PWWAW+KRFHLPEAELLNG
Sbjct: 116 KDGKTDWDAVIDAEVRRRKWLEGNPESSSNDDPVVFDTSIIPWWAWMKRFHLPEAELLNG 175
Query: 168 RAAMIGFFMAYLVDSLTGVGLVDQMSNFFCKTLLFVAVVGVLLIRKNEDIETLKKLLEET 227
RAAMIGFFMAYLVDSLTGVG+VDQM NFFCKTLLFVAVVGVLLIRKNED+ET+K LLEET
Sbjct: 176 RAAMIGFFMAYLVDSLTGVGVVDQMGNFFCKTLLFVAVVGVLLIRKNEDLETIKTLLEET 235
Query: 228 TFYDKQWQATWQDETTSGAKKE 249
TFYD+QWQATWQDET+S K E
Sbjct: 236 TFYDRQWQATWQDETSSIPKNE 257
>gi|356563395|ref|XP_003549949.1| PREDICTED: uncharacterized protein LOC100780555 [Glycine max]
Length = 264
Score = 328 bits (841), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 169/262 (64%), Positives = 199/262 (75%), Gaps = 16/262 (6%)
Query: 2 STSIDLLSFSPP------PSSMLSRTQFSFTHKPTFLLSSKKESFFTLRASAADNGAGVS 55
S S + SFSPP PSS S+ + + + F L SK +F L+A+AA+NG G +
Sbjct: 5 SMSTTMASFSPPTHFSAAPSS--SKLRLVYKNNNFFSLRSKSLAFSPLKAAAAENGVGTA 62
Query: 56 A---PAVTVEEPKVREASEGPT-ESNG----AVEAPEVKAVNKFEDPKWVNGTWDLKQFQ 107
P V P++ + G + +NG AVE+ EVK F DP+WV+GTWDLKQFQ
Sbjct: 63 VEPPPEQAVSVPELPPPAVGNSVGTNGSAAVAVESEEVKVKTGFVDPRWVSGTWDLKQFQ 122
Query: 108 KNGQTDWDAVIDAEARRRKWLENSPESSSNDDPVIFDTSIVPWWAWIKRFHLPEAELLNG 167
KNG TDWDAVIDAEARRRKWLE++PESSSN++PV+FDTSI+PWWAW+KRFHLPEAELLNG
Sbjct: 123 KNGTTDWDAVIDAEARRRKWLEDNPESSSNENPVVFDTSIIPWWAWMKRFHLPEAELLNG 182
Query: 168 RAAMIGFFMAYLVDSLTGVGLVDQMSNFFCKTLLFVAVVGVLLIRKNEDIETLKKLLEET 227
RAAM+GFFMAY VDSLTGVGLVDQM NFFCKTLLFVAV+GVLLIRKNED E LKKL +ET
Sbjct: 183 RAAMVGFFMAYFVDSLTGVGLVDQMGNFFCKTLLFVAVLGVLLIRKNEDFENLKKLFDET 242
Query: 228 TFYDKQWQATWQDETTSGAKKE 249
T YDKQWQATWQDE +S +K E
Sbjct: 243 TLYDKQWQATWQDENSSTSKNE 264
>gi|297745675|emb|CBI40929.3| unnamed protein product [Vitis vinifera]
Length = 227
Score = 325 bits (833), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 165/242 (68%), Positives = 185/242 (76%), Gaps = 20/242 (8%)
Query: 10 FSPPPSSMLSRT--QFSFTHKPTFLLSSKKESFFTLRASAADNGAGVSAPAVTVEEPKVR 67
FSPP + L + +FT KP+ L SKK L A A +NGAG S A TVE K
Sbjct: 4 FSPPIPTHLPTLSPKPNFTLKPSLFLRSKKHQLLLLSAKATENGAGTSTSATTVEPEKAE 63
Query: 68 EASEGPTESNGAVEAPEVKAVNKFEDPKWVNGTWDLKQFQKNGQTDWDAVIDAEARRRKW 127
E +APE D KWV GTWDLKQF+ +G+T+WDAVIDAE RRRKW
Sbjct: 64 E------------KAPEAA------DLKWVGGTWDLKQFETDGKTNWDAVIDAEVRRRKW 105
Query: 128 LENSPESSSNDDPVIFDTSIVPWWAWIKRFHLPEAELLNGRAAMIGFFMAYLVDSLTGVG 187
LE++PESSSNDDPV+FDTSI+PWWAWIKRFHLPEAELLNGRAAMIGFFMAYLVDSLTGVG
Sbjct: 106 LEDNPESSSNDDPVVFDTSIIPWWAWIKRFHLPEAELLNGRAAMIGFFMAYLVDSLTGVG 165
Query: 188 LVDQMSNFFCKTLLFVAVVGVLLIRKNEDIETLKKLLEETTFYDKQWQATWQDETTSGAK 247
LVDQM NFFCKTLLFVAVVGVLLIRKNED+ETLKKL++ETTFYDKQWQA+WQDET S +K
Sbjct: 166 LVDQMGNFFCKTLLFVAVVGVLLIRKNEDLETLKKLVDETTFYDKQWQASWQDETPSSSK 225
Query: 248 KE 249
+
Sbjct: 226 ND 227
>gi|449459006|ref|XP_004147237.1| PREDICTED: uncharacterized protein LOC101206464 [Cucumis sativus]
gi|449510491|ref|XP_004163681.1| PREDICTED: uncharacterized LOC101206464 [Cucumis sativus]
Length = 266
Score = 324 bits (830), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 177/266 (66%), Positives = 198/266 (74%), Gaps = 26/266 (9%)
Query: 1 MSTSIDLLSFSPPPSSMLSRTQFSFTHKPTFLLSSKK-----ESFFTLRASAADNGAGVS 55
S S L +FSP + T FSF +P L ++ S FT+RA+A DNGAG+S
Sbjct: 7 FSPSSHLSTFSPSHHT----THFSF--RPFSSLRTRNPSSSSSSLFTIRATA-DNGAGIS 59
Query: 56 APAVTV------EEPKVREASEGPTE------SNGAVEAPEVKAV--NKFEDPKWVNGTW 101
+ TV E+ A P E +NG+V A E +KFEDPKWVNGTW
Sbjct: 60 GGSATVSVETPVEQKDPEPAKLAPEEQESLAGTNGSVAAAEEVVEVVSKFEDPKWVNGTW 119
Query: 102 DLKQFQKNGQTDWDAVIDAEARRRKWLENSPESSSNDDPVIFDTSIVPWWAWIKRFHLPE 161
DL QFQKNG TDWDAVIDAEARRRKWLEN+PESSSN+DPV+FDTSIVPWWAWIKR+HLPE
Sbjct: 120 DLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPE 179
Query: 162 AELLNGRAAMIGFFMAYLVDSLTGVGLVDQMSNFFCKTLLFVAVVGVLLIRKNEDIETLK 221
AELLNGRAAM+GFFMAY VDSLTGVGLV QM NFFCKTLLFVAVVGVLLIRKNEDIETLK
Sbjct: 180 AELLNGRAAMVGFFMAYFVDSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLK 239
Query: 222 KLLEETTFYDKQWQATWQDETTSGAK 247
KL++ETTFYDKQWQATWQDET+ K
Sbjct: 240 KLIDETTFYDKQWQATWQDETSGSGK 265
>gi|356510909|ref|XP_003524176.1| PREDICTED: uncharacterized protein LOC100789538 [Glycine max]
Length = 264
Score = 323 bits (827), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 172/262 (65%), Positives = 198/262 (75%), Gaps = 16/262 (6%)
Query: 2 STSIDLLSFSPP------PSSMLSRTQFSFTHKPTFLLSSKKESFFTLRASAADNGAG-- 53
S S + SFSPP PSS S+ + + + F L S+ S L+A+A++NG G
Sbjct: 5 SMSTTMASFSPPTHFSATPSS--SKPRLVYKNNFFFSLRSRSLSLSPLKAAASENGVGTA 62
Query: 54 VSAP---AVTVEEPKVREASEGPTESNG---AVEAPEVKAVNKFEDPKWVNGTWDLKQFQ 107
V P AV V EP + +NG AVE+ VK + F DP+WV GTWDLKQFQ
Sbjct: 63 VEPPPEQAVPVPEPSLPPVDNSSVGTNGSAVAVESEVVKVQSSFVDPRWVAGTWDLKQFQ 122
Query: 108 KNGQTDWDAVIDAEARRRKWLENSPESSSNDDPVIFDTSIVPWWAWIKRFHLPEAELLNG 167
KNG TDWDAVIDAEARRRKWLE++PESSSN++PV+FDTSIVPWWAW+KRFHLPEAELLNG
Sbjct: 123 KNGTTDWDAVIDAEARRRKWLEDNPESSSNENPVVFDTSIVPWWAWMKRFHLPEAELLNG 182
Query: 168 RAAMIGFFMAYLVDSLTGVGLVDQMSNFFCKTLLFVAVVGVLLIRKNEDIETLKKLLEET 227
RAAMIGFFMAY VDSLTGVGLVDQMSNFFCKTLLFVAV+GVLLIRKNED+E LKKL +ET
Sbjct: 183 RAAMIGFFMAYFVDSLTGVGLVDQMSNFFCKTLLFVAVLGVLLIRKNEDLENLKKLFDET 242
Query: 228 TFYDKQWQATWQDETTSGAKKE 249
T YDKQWQATWQDE +S +K E
Sbjct: 243 TLYDKQWQATWQDENSSTSKNE 264
>gi|388503762|gb|AFK39947.1| unknown [Medicago truncatula]
Length = 258
Score = 312 bits (800), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 164/258 (63%), Positives = 188/258 (72%), Gaps = 9/258 (3%)
Query: 1 MSTSIDLLSFSPPPSSMLSRTQFSFTHKPT--------FLLSSKKESFFTLRASAADNGA 52
MST++ + S P + +S T S + F L+ + ++ L S A
Sbjct: 1 MSTTMSMSMASFSPLTRISTTYSSLSKPHHHPNHSNNHFTLTLRPKNLPLLSLSPLRASA 60
Query: 53 GVSAPAVTVEEPKVREASEGPTESNGAVE-APEVKAVNKFEDPKWVNGTWDLKQFQKNGQ 111
G S A T +P S G S AV A EVK + F DP+WV GTWDL QF+KNG
Sbjct: 61 GTSDSAETAVKPPPENISVGTNGSASAVPVAEEVKVSSAFVDPRWVAGTWDLMQFRKNGT 120
Query: 112 TDWDAVIDAEARRRKWLENSPESSSNDDPVIFDTSIVPWWAWIKRFHLPEAELLNGRAAM 171
TDWDAVIDAEARRRKWLE +PESSSND+PV+FDTSIVPWWAWIKRFHLPEAELLNGRAAM
Sbjct: 121 TDWDAVIDAEARRRKWLETNPESSSNDNPVVFDTSIVPWWAWIKRFHLPEAELLNGRAAM 180
Query: 172 IGFFMAYLVDSLTGVGLVDQMSNFFCKTLLFVAVVGVLLIRKNEDIETLKKLLEETTFYD 231
IGFFM YLVDSLTGVGLVDQM+NFFCKTLLFVAV GVLLIRKNED++T KKLLEETTFYD
Sbjct: 181 IGFFMTYLVDSLTGVGLVDQMNNFFCKTLLFVAVGGVLLIRKNEDVDTFKKLLEETTFYD 240
Query: 232 KQWQATWQDETTSGAKKE 249
KQWQATWQDE +S ++K+
Sbjct: 241 KQWQATWQDENSSTSRKD 258
>gi|388502596|gb|AFK39364.1| unknown [Lotus japonicus]
Length = 259
Score = 311 bits (797), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 166/262 (63%), Positives = 192/262 (73%), Gaps = 19/262 (7%)
Query: 2 STSIDLLSFSPPPSSMLSRTQFSFTHKPTFLLSSKKESFFTLR-----------ASAADN 50
+ S + SFSP + S T S KP ++ FFTLR +++DN
Sbjct: 3 TMSTTMASFSP--LTRFSATLSSSNSKPHL---TQNHFFFTLRPKNLPLSPLKWKASSDN 57
Query: 51 GAGVSAPAVT-VEEP--KVREASEGPTESNGAVEAPEVKAVNKFEDPKWVNGTWDLKQFQ 107
GAG S A T VE P K+ + G S A A E+K FEDP+WV GTWDL QF+
Sbjct: 58 GAGASDSAATAVESPPEKISVGTNGSASSAAAAAAEELKIPGGFEDPRWVAGTWDLMQFR 117
Query: 108 KNGQTDWDAVIDAEARRRKWLENSPESSSNDDPVIFDTSIVPWWAWIKRFHLPEAELLNG 167
KNG TDWDAVIDAEARRRKWL+++PESSSN++PV+FDTSIVPWWAWIKRFHLPEAE LNG
Sbjct: 118 KNGSTDWDAVIDAEARRRKWLQDNPESSSNENPVVFDTSIVPWWAWIKRFHLPEAERLNG 177
Query: 168 RAAMIGFFMAYLVDSLTGVGLVDQMSNFFCKTLLFVAVVGVLLIRKNEDIETLKKLLEET 227
RAAMIGFFMAYLVDSLTGVGLVDQ +NF CKTLLF+AV GVLLIRKNED+E LKKL +ET
Sbjct: 178 RAAMIGFFMAYLVDSLTGVGLVDQTNNFVCKTLLFIAVAGVLLIRKNEDLENLKKLFDET 237
Query: 228 TFYDKQWQATWQDETTSGAKKE 249
TFYDKQWQATWQDE ++ +KKE
Sbjct: 238 TFYDKQWQATWQDENSNTSKKE 259
>gi|2245118|emb|CAB10540.1| hypothetical protein [Arabidopsis thaliana]
gi|7268512|emb|CAB78763.1| hypothetical protein [Arabidopsis thaliana]
Length = 350
Score = 300 bits (768), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 156/260 (60%), Positives = 194/260 (74%), Gaps = 21/260 (8%)
Query: 10 FSPPPSSMLSRTQFSFTHKPTF-LLSSKKESFFTLRASAADNGAGVSAPAVTVEEPK--- 65
FSPP SS S +F K +F LLSS + S ++ +++D+G+ AV+VE P+
Sbjct: 4 FSPPISSS-SLQNPNFIPKFSFSLLSSNRFSLLSVTRASSDSGSTSPTAAVSVEAPEPVE 62
Query: 66 --VRE---------ASEGPTESNGAVEAPEVK---AVNKFEDPKWVNGTWDLKQFQKNGQ 111
V+E E T N AVE E+K +V KF+D +W+NGTWDLKQF+K+G+
Sbjct: 63 VIVKEPPQSTPAVKKEETATAKNVAVEGEEMKTTESVVKFQDARWINGTWDLKQFEKDGK 122
Query: 112 TDWDAVIDAEARRRKWLENSPESSSNDDPVIFDTSIVPWWAWIKRFHLPEAELLNGRAAM 171
TDWD+VI AEA+RRKWLE +PE++SND+PV+FDTSI+PWWAWIKR+HLPEAELLNGRAAM
Sbjct: 123 TDWDSVIVAEAKRRKWLEENPETTSNDEPVLFDTSIIPWWAWIKRYHLPEAELLNGRAAM 182
Query: 172 IGFFMAYLVDSLTGVGLVDQMSNFFCKTLLFVAVVGVLLIRKNEDIETLKKLLEETTFYD 231
IGFFMAY VDSLTGVGLVDQM NFFCKTLLFVAV GVL IRKNED++ LK L +ETT YD
Sbjct: 183 IGFFMAYFVDSLTGVGLVDQMGNFFCKTLLFVAVAGVLFIRKNEDVDKLKNLFDETTLYD 242
Query: 232 KQWQATWQ--DETTSGAKKE 249
KQWQA W+ D+ + G+KK+
Sbjct: 243 KQWQAAWKNDDDESLGSKKK 262
>gi|18414927|ref|NP_567532.1| chlorophyll A-B binding protein [Arabidopsis thaliana]
gi|4741966|gb|AAD28780.1|AF134133_1 Lil3 protein [Arabidopsis thaliana]
gi|14030673|gb|AAK53011.1|AF375427_1 AT4g17600/dl4835w [Arabidopsis thaliana]
gi|18491101|gb|AAL69517.1| AT4g17600/dl4835w [Arabidopsis thaliana]
gi|22530970|gb|AAM96989.1| Lil3 protein [Arabidopsis thaliana]
gi|23198388|gb|AAN15721.1| Lil3 protein [Arabidopsis thaliana]
gi|23306350|gb|AAN17402.1| Lil3 protein [Arabidopsis thaliana]
gi|25084208|gb|AAN72196.1| Lil3 protein [Arabidopsis thaliana]
gi|332658519|gb|AEE83919.1| chlorophyll A-B binding protein [Arabidopsis thaliana]
Length = 262
Score = 298 bits (764), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 155/260 (59%), Positives = 192/260 (73%), Gaps = 21/260 (8%)
Query: 10 FSPPPSSMLSRTQFSFTHKPTF-LLSSKKESFFTLRASAADNGAGVSAPAVTVEEPKVRE 68
FSPP SS S +F K +F LLSS + S ++ +++D+G+ AV+VE P+ E
Sbjct: 4 FSPPISSS-SLQNPNFIPKFSFSLLSSNRFSLLSVTRASSDSGSTSPTAAVSVEAPEPVE 62
Query: 69 A--------------SEGPTESNGAVEAPEVK---AVNKFEDPKWVNGTWDLKQFQKNGQ 111
E T N AVE E+K +V KF+D +W+NGTWDLKQF+K+G+
Sbjct: 63 VIVKEPPQSTPAVKKEETATAKNVAVEGEEMKTTESVVKFQDARWINGTWDLKQFEKDGK 122
Query: 112 TDWDAVIDAEARRRKWLENSPESSSNDDPVIFDTSIVPWWAWIKRFHLPEAELLNGRAAM 171
TDWD+VI AEA+RRKWLE +PE++SND+PV+FDTSI+PWWAWIKR+HLPEAELLNGRAAM
Sbjct: 123 TDWDSVIVAEAKRRKWLEENPETTSNDEPVLFDTSIIPWWAWIKRYHLPEAELLNGRAAM 182
Query: 172 IGFFMAYLVDSLTGVGLVDQMSNFFCKTLLFVAVVGVLLIRKNEDIETLKKLLEETTFYD 231
IGFFMAY VDSLTGVGLVDQM NFFCKTLLFVAV GVL IRKNED++ LK L +ETT YD
Sbjct: 183 IGFFMAYFVDSLTGVGLVDQMGNFFCKTLLFVAVAGVLFIRKNEDVDKLKNLFDETTLYD 242
Query: 232 KQWQATWQ--DETTSGAKKE 249
KQWQA W+ D+ + G+KK+
Sbjct: 243 KQWQAAWKNDDDESLGSKKK 262
>gi|21555799|gb|AAM63936.1| Lil3 protein [Arabidopsis thaliana]
Length = 262
Score = 298 bits (763), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 155/260 (59%), Positives = 192/260 (73%), Gaps = 21/260 (8%)
Query: 10 FSPPPSSMLSRTQFSFTHKPTF-LLSSKKESFFTLRASAADNGAGVSAPAVTVEEPKVRE 68
FSPP SS S +F K +F LLSS + S ++ +++D+G+ AV+VE P+ E
Sbjct: 4 FSPPISSS-SLQNPNFIPKFSFSLLSSNRFSLLSVTRASSDSGSTSPTAAVSVEAPEPVE 62
Query: 69 A--------------SEGPTESNGAVEAPEVK---AVNKFEDPKWVNGTWDLKQFQKNGQ 111
E T N AVE E+K +V KF+D +W+NGTWDLKQF+K+G+
Sbjct: 63 VIVKEPPQSTPAVKKEETATAKNVAVEGEEMKTTESVIKFQDARWINGTWDLKQFEKDGK 122
Query: 112 TDWDAVIDAEARRRKWLENSPESSSNDDPVIFDTSIVPWWAWIKRFHLPEAELLNGRAAM 171
TDWD+VI AEA+RRKWLE +PE++SND+PV+FDTSI+PWWAWIKR+HLPEAELLNGRAAM
Sbjct: 123 TDWDSVIVAEAKRRKWLEENPETTSNDEPVLFDTSIIPWWAWIKRYHLPEAELLNGRAAM 182
Query: 172 IGFFMAYLVDSLTGVGLVDQMSNFFCKTLLFVAVVGVLLIRKNEDIETLKKLLEETTFYD 231
IGFFMAY VDSLTGVGLVDQM NFFCKTLLFVAV GVL IRKNED++ LK L +ETT YD
Sbjct: 183 IGFFMAYFVDSLTGVGLVDQMGNFFCKTLLFVAVAGVLFIRKNEDVDKLKNLFDETTLYD 242
Query: 232 KQWQATWQ--DETTSGAKKE 249
KQWQA W+ D+ + G+KK+
Sbjct: 243 KQWQAAWKNDDDESLGSKKK 262
>gi|215678600|dbj|BAG92255.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 250
Score = 296 bits (759), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 154/244 (63%), Positives = 173/244 (70%), Gaps = 11/244 (4%)
Query: 13 PPSSMLSRTQFSFTHKPTFLLSSKKESFFTLRASAADNGAGVSAPAVTVEEPKVR-EASE 71
PP+S LS T+ P L S S A AP TVE P + EA
Sbjct: 10 PPASQLSLTRRRLHPGPDLLTLS---SPRLRAGLRLARAAAGEAPVETVEAPPSKPEAEP 66
Query: 72 GPTESNGAVEAPE-------VKAVNKFEDPKWVNGTWDLKQFQKNGQTDWDAVIDAEARR 124
P SNGA E + KF D +WVNGTWDL+QF+K G DWDAVIDAEARR
Sbjct: 67 SPAASNGAAVKAEKPPAAAAAPPLPKFRDSRWVNGTWDLRQFEKGGAVDWDAVIDAEARR 126
Query: 125 RKWLENSPESSSNDDPVIFDTSIVPWWAWIKRFHLPEAELLNGRAAMIGFFMAYLVDSLT 184
RKWLE+ PE++S D+ V+FDTSI+PWWAW+KRFHLPEAE LNGRAAMIGFFMAY VDSLT
Sbjct: 127 RKWLEDCPEATSPDEAVVFDTSIIPWWAWMKRFHLPEAEKLNGRAAMIGFFMAYFVDSLT 186
Query: 185 GVGLVDQMSNFFCKTLLFVAVVGVLLIRKNEDIETLKKLLEETTFYDKQWQATWQDETTS 244
GVGLVDQM NFFCKTLLFVAV GVLL+RKNEDIET+KKL++ETTFYDKQWQATWQDE+ S
Sbjct: 187 GVGLVDQMGNFFCKTLLFVAVAGVLLVRKNEDIETVKKLIDETTFYDKQWQATWQDESPS 246
Query: 245 GAKK 248
KK
Sbjct: 247 QPKK 250
>gi|41053067|dbj|BAD08011.1| putative Lil3 protein [Oryza sativa Japonica Group]
Length = 248
Score = 296 bits (758), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 154/244 (63%), Positives = 173/244 (70%), Gaps = 11/244 (4%)
Query: 13 PPSSMLSRTQFSFTHKPTFLLSSKKESFFTLRASAADNGAGVSAPAVTVEEPKVR-EASE 71
PP+S LS T+ P L S S A AP TVE P + EA
Sbjct: 8 PPASQLSLTRRRLHPGPDLLTLS---SPRLRAGLRLARAAAGEAPVETVEAPPSKPEAEP 64
Query: 72 GPTESNGAVEAPE-------VKAVNKFEDPKWVNGTWDLKQFQKNGQTDWDAVIDAEARR 124
P SNGA E + KF D +WVNGTWDL+QF+K G DWDAVIDAEARR
Sbjct: 65 SPAASNGAAVKAEKPPAAAAAPPLPKFRDSRWVNGTWDLRQFEKGGAVDWDAVIDAEARR 124
Query: 125 RKWLENSPESSSNDDPVIFDTSIVPWWAWIKRFHLPEAELLNGRAAMIGFFMAYLVDSLT 184
RKWLE+ PE++S D+ V+FDTSI+PWWAW+KRFHLPEAE LNGRAAMIGFFMAY VDSLT
Sbjct: 125 RKWLEDCPEATSPDEAVVFDTSIIPWWAWMKRFHLPEAEKLNGRAAMIGFFMAYFVDSLT 184
Query: 185 GVGLVDQMSNFFCKTLLFVAVVGVLLIRKNEDIETLKKLLEETTFYDKQWQATWQDETTS 244
GVGLVDQM NFFCKTLLFVAV GVLL+RKNEDIET+KKL++ETTFYDKQWQATWQDE+ S
Sbjct: 185 GVGLVDQMGNFFCKTLLFVAVAGVLLVRKNEDIETVKKLIDETTFYDKQWQATWQDESPS 244
Query: 245 GAKK 248
KK
Sbjct: 245 QPKK 248
>gi|218189966|gb|EEC72393.1| hypothetical protein OsI_05674 [Oryza sativa Indica Group]
Length = 787
Score = 296 bits (758), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 143/201 (71%), Positives = 160/201 (79%), Gaps = 8/201 (3%)
Query: 56 APAVTVEEPKVR-EASEGPTESNGAVEAPE-------VKAVNKFEDPKWVNGTWDLKQFQ 107
AP TVE P + EA P SNGA E + KF D +WVNGTWDL+QF+
Sbjct: 587 APVETVEAPPSKPEAEPSPAASNGAAVKAEKPPAAAAAPPLPKFRDSRWVNGTWDLRQFE 646
Query: 108 KNGQTDWDAVIDAEARRRKWLENSPESSSNDDPVIFDTSIVPWWAWIKRFHLPEAELLNG 167
K G DWDAVIDAEARRRKWLE+ PE++S D+ V+FDTSI+PWWAW+KRFHLPEAE LNG
Sbjct: 647 KGGAVDWDAVIDAEARRRKWLEDCPEATSPDEAVVFDTSIIPWWAWMKRFHLPEAEKLNG 706
Query: 168 RAAMIGFFMAYLVDSLTGVGLVDQMSNFFCKTLLFVAVVGVLLIRKNEDIETLKKLLEET 227
RAAMIGFFMAY VDSLTGVGLVDQM NFFCKTLLFVAV GVLL+RKNEDIET+KKL++ET
Sbjct: 707 RAAMIGFFMAYFVDSLTGVGLVDQMGNFFCKTLLFVAVAGVLLVRKNEDIETVKKLIDET 766
Query: 228 TFYDKQWQATWQDETTSGAKK 248
TFYDKQWQATWQDE+ S KK
Sbjct: 767 TFYDKQWQATWQDESPSQPKK 787
>gi|297804424|ref|XP_002870096.1| Lil3 protein [Arabidopsis lyrata subsp. lyrata]
gi|297315932|gb|EFH46355.1| Lil3 protein [Arabidopsis lyrata subsp. lyrata]
Length = 261
Score = 295 bits (755), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 154/259 (59%), Positives = 191/259 (73%), Gaps = 21/259 (8%)
Query: 10 FSPPPSSMLSRTQFSFTHKPTF-LLSSKKESFFTLRASAADNGAGVSAPAVTVEEPK--- 65
FSPP SS S +F K +F LLS+ + S ++ +++D+G+ A VE P+
Sbjct: 4 FSPPISSS-SLQNPNFIPKFSFSLLSTNRFSLLSVTRASSDSGSTSPTSATAVEAPEPVE 62
Query: 66 --VREA---------SEGPTESNGAVEAPEVKA---VNKFEDPKWVNGTWDLKQFQKNGQ 111
++EA E T N AVE E+K V KF+D +W+NGTWDLKQF+K+G+
Sbjct: 63 VIIKEAPQSTPPVTKEEITTAKNVAVEGEEMKTTETVIKFQDARWINGTWDLKQFEKDGK 122
Query: 112 TDWDAVIDAEARRRKWLENSPESSSNDDPVIFDTSIVPWWAWIKRFHLPEAELLNGRAAM 171
TDWD+VI AEA+RRKWLE +PE++SND+PV+FDTSI+PWWAWIKR+HLPEAELLNGRAAM
Sbjct: 123 TDWDSVIVAEAKRRKWLEENPETTSNDEPVLFDTSIIPWWAWIKRYHLPEAELLNGRAAM 182
Query: 172 IGFFMAYLVDSLTGVGLVDQMSNFFCKTLLFVAVVGVLLIRKNEDIETLKKLLEETTFYD 231
IGFFMAY VDSLTGVGLVDQM NFFCKTLLFVAV GVL IRKNED++ LK L +ETT YD
Sbjct: 183 IGFFMAYFVDSLTGVGLVDQMGNFFCKTLLFVAVAGVLFIRKNEDVDKLKNLFDETTLYD 242
Query: 232 KQWQATWQ--DETTSGAKK 248
KQWQA W+ D+ + G+KK
Sbjct: 243 KQWQAAWKNDDDESLGSKK 261
>gi|89257528|gb|ABD65018.1| Lil3 protein, putative [Brassica oleracea]
Length = 225
Score = 291 bits (745), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 147/239 (61%), Positives = 178/239 (74%), Gaps = 19/239 (7%)
Query: 11 SPPPSSMLSRTQFSFTHKPTFLLSSKKESFFTL-RASAADNGAGVSAPAVTVEEPKVREA 69
SPP SS L + + T LLS+K+ S F+L RAS++DNG + A TVE PK
Sbjct: 5 SPPISSPLLNSTLTPKILLT-LLSTKRLSLFSLTRASSSDNGTSATVSATTVEIPK---- 59
Query: 70 SEGPTESNGAVEAPEVKAVNKFEDPKWVNGTWDLKQFQKNGQTDWDAVIDAEARRRKWLE 129
P A + D KWVNGTWDLKQF+K G+TDWD+VI +EA+RRKWLE
Sbjct: 60 -------------PVSPAKEEVPDAKWVNGTWDLKQFEKEGKTDWDSVIVSEAKRRKWLE 106
Query: 130 NSPESSSNDDPVIFDTSIVPWWAWIKRFHLPEAELLNGRAAMIGFFMAYLVDSLTGVGLV 189
+SPE+++ND+PV+FDTSI+PWWAW+KR+HLPEAELLNGRAAMIGFFM+Y VDSLTGVGLV
Sbjct: 107 DSPETTTNDEPVLFDTSIIPWWAWMKRYHLPEAELLNGRAAMIGFFMSYFVDSLTGVGLV 166
Query: 190 DQMSNFFCKTLLFVAVVGVLLIRKNEDIETLKKLLEETTFYDKQWQATWQDETTSGAKK 248
DQM NFFCKTLLFVAV GVL IRKNED++ L+ L EETT YDKQWQA W++ +S +KK
Sbjct: 167 DQMGNFFCKTLLFVAVAGVLFIRKNEDLDKLQGLFEETTLYDKQWQAAWKEPESSSSKK 225
>gi|30695110|ref|NP_199522.2| Chlorophyll A-B binding family protein [Arabidopsis thaliana]
gi|38566672|gb|AAR24226.1| At5g47110 [Arabidopsis thaliana]
gi|46931268|gb|AAT06438.1| At5g47110 [Arabidopsis thaliana]
gi|332008089|gb|AED95472.1| Chlorophyll A-B binding family protein [Arabidopsis thaliana]
Length = 258
Score = 290 bits (741), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 151/260 (58%), Positives = 190/260 (73%), Gaps = 18/260 (6%)
Query: 4 SIDLLSFSPPPSSMLSRTQFSFTHKPTFLLSSKKESFFTLRASAADNGAGVSAPAVTVEE 63
SI + FSPP SS L T LLS+K+ S ++ +++DNG ++P V + +
Sbjct: 2 SISMALFSPPISSSLQNPNL-IPKISTSLLSTKRFSLISVPRASSDNGT--TSPVVEIPK 58
Query: 64 PKVREASEGPTES---------NGAV--EAPE--VKAVNKFEDPKWVNGTWDLKQFQKNG 110
P E P +S NGAV EA + + V K+++ KWVNGTWDLKQF+K+G
Sbjct: 59 PASVAVEEVPVKSPAESSSASENGAVGGEATDSSTETVIKYQNAKWVNGTWDLKQFEKDG 118
Query: 111 QTDWDAVIDAEARRRKWLENSPESSSNDDPVIFDTSIVPWWAWIKRFHLPEAELLNGRAA 170
+TDWD+VI +EA+RRKWLE++PE++SND+ V+FDTSI+PWWAW+KR+HLPEAELLNGRAA
Sbjct: 119 KTDWDSVIVSEAKRRKWLEDNPETTSNDELVVFDTSIIPWWAWMKRYHLPEAELLNGRAA 178
Query: 171 MIGFFMAYLVDSLTGVGLVDQMSNFFCKTLLFVAVVGVLLIRKNEDIETLKKLLEETTFY 230
MIGFFMAY VDSLTGVGLVDQM NFFCKTLLFVAV GVL IRKNED++ LK L +ETT Y
Sbjct: 179 MIGFFMAYFVDSLTGVGLVDQMGNFFCKTLLFVAVAGVLFIRKNEDLDKLKDLFDETTLY 238
Query: 231 DKQWQATWQ--DETTSGAKK 248
DKQWQA W+ D +T +KK
Sbjct: 239 DKQWQAAWKEPDSSTVSSKK 258
>gi|297790951|ref|XP_002863360.1| hypothetical protein ARALYDRAFT_916691 [Arabidopsis lyrata subsp.
lyrata]
gi|297309195|gb|EFH39619.1| hypothetical protein ARALYDRAFT_916691 [Arabidopsis lyrata subsp.
lyrata]
Length = 264
Score = 288 bits (736), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 155/268 (57%), Positives = 186/268 (69%), Gaps = 28/268 (10%)
Query: 4 SIDLLSFSPPPSSMLSRTQFSFTHKPTFLLSSKKESFFTLRASAADNG------AGVSAP 57
SI + FSPP +L T LLS+K+ S ++ +++DNG A VSA
Sbjct: 2 SISMAFFSPP---ILQNPNL-IPKISTSLLSTKRFSLISVPRASSDNGTTSPASASVSAT 57
Query: 58 AVTVEEPKV----------REASEGPTESNGAVEAPEVK-----AVNKFEDPKWVNGTWD 102
V VE PK + NGAV E V KFED KWVNGTWD
Sbjct: 58 TV-VEIPKPVAVAVEEVPVKSPESSSASGNGAVGGEETDLGTAATVIKFEDAKWVNGTWD 116
Query: 103 LKQFQKNGQTDWDAVIDAEARRRKWLENSPESSSNDDPVIFDTSIVPWWAWIKRFHLPEA 162
LKQF+K+G+TDWD+VI +EA+RRKWLE++PE++SND+PV+FDTSI+PWWAW+KR+HLPEA
Sbjct: 117 LKQFEKDGKTDWDSVIVSEAKRRKWLEDNPETTSNDEPVLFDTSIIPWWAWMKRYHLPEA 176
Query: 163 ELLNGRAAMIGFFMAYLVDSLTGVGLVDQMSNFFCKTLLFVAVVGVLLIRKNEDIETLKK 222
ELLNGRAAMIGFFMAY VDSLTGVGLVDQM NFFCKTLLFVAV GVL IRKNED++ LK
Sbjct: 177 ELLNGRAAMIGFFMAYFVDSLTGVGLVDQMGNFFCKTLLFVAVAGVLFIRKNEDLDKLKD 236
Query: 223 LLEETTFYDKQWQATWQ--DETTSGAKK 248
L +ETT YDKQWQA W+ D +T +KK
Sbjct: 237 LFDETTLYDKQWQAAWKEPDPSTVSSKK 264
>gi|8978078|dbj|BAA98106.1| Lil3 protein [Arabidopsis thaliana]
Length = 254
Score = 287 bits (735), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 149/254 (58%), Positives = 187/254 (73%), Gaps = 18/254 (7%)
Query: 10 FSPPPSSMLSRTQFSFTHKPTFLLSSKKESFFTLRASAADNGAGVSAPAVTVEEPKVREA 69
FSPP SS L T LLS+K+ S ++ +++DNG ++P V + +P
Sbjct: 4 FSPPISSSLQNPNL-IPKISTSLLSTKRFSLISVPRASSDNGT--TSPVVEIPKPASVAV 60
Query: 70 SEGPTES---------NGAV--EAPE--VKAVNKFEDPKWVNGTWDLKQFQKNGQTDWDA 116
E P +S NGAV EA + + V K+++ KWVNGTWDLKQF+K+G+TDWD+
Sbjct: 61 EEVPVKSPAESSSASENGAVGGEATDSSTETVIKYQNAKWVNGTWDLKQFEKDGKTDWDS 120
Query: 117 VIDAEARRRKWLENSPESSSNDDPVIFDTSIVPWWAWIKRFHLPEAELLNGRAAMIGFFM 176
VI +EA+RRKWLE++PE++SND+ V+FDTSI+PWWAW+KR+HLPEAELLNGRAAMIGFFM
Sbjct: 121 VIVSEAKRRKWLEDNPETTSNDELVVFDTSIIPWWAWMKRYHLPEAELLNGRAAMIGFFM 180
Query: 177 AYLVDSLTGVGLVDQMSNFFCKTLLFVAVVGVLLIRKNEDIETLKKLLEETTFYDKQWQA 236
AY VDSLTGVGLVDQM NFFCKTLLFVAV GVL IRKNED++ LK L +ETT YDKQWQA
Sbjct: 181 AYFVDSLTGVGLVDQMGNFFCKTLLFVAVAGVLFIRKNEDLDKLKDLFDETTLYDKQWQA 240
Query: 237 TWQ--DETTSGAKK 248
W+ D +T +KK
Sbjct: 241 AWKEPDSSTVSSKK 254
>gi|89257427|gb|ABD64919.1| Lil3 protein, putative [Brassica oleracea]
Length = 248
Score = 286 bits (731), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 145/242 (59%), Positives = 178/242 (73%), Gaps = 20/242 (8%)
Query: 10 FSPPPSSMLSRTQFSFTHKPTFLLSSKKESFFTLRASAADNGAGVS----APAVTVEEPK 65
FSPP SS L + +L S ++ +++DNGA + A TVE PK
Sbjct: 4 FSPPISSSL---------RNPYLSPKNSLSLLSVTRASSDNGASTTDSAAVSATTVEIPK 54
Query: 66 -----VREA-SEGPTESNG-AVEAPEVKAVNKFEDPKWVNGTWDLKQFQKNGQTDWDAVI 118
V E S+ P ES+ + P + KFED KWVNGTWDLKQF+K+G+TDWD++I
Sbjct: 55 PASVTVEEVPSKSPAESSSDETDLPTTETGIKFEDAKWVNGTWDLKQFEKDGKTDWDSII 114
Query: 119 DAEARRRKWLENSPESSSNDDPVIFDTSIVPWWAWIKRFHLPEAELLNGRAAMIGFFMAY 178
AEA+RRKWLE++PE+++N +PV+FDTSI+PWWAW+KR+HLPEAELLNGRAAMIGFFMAY
Sbjct: 115 VAEAKRRKWLEDNPETTTNAEPVLFDTSIIPWWAWMKRYHLPEAELLNGRAAMIGFFMAY 174
Query: 179 LVDSLTGVGLVDQMSNFFCKTLLFVAVVGVLLIRKNEDIETLKKLLEETTFYDKQWQATW 238
VDSLTGVGLVDQM NFFCKTLLFVAV GVL IRKNED++ LK L+EETT YDKQWQA W
Sbjct: 175 FVDSLTGVGLVDQMGNFFCKTLLFVAVAGVLFIRKNEDLDKLKGLIEETTLYDKQWQAAW 234
Query: 239 QD 240
++
Sbjct: 235 KE 236
>gi|242060328|ref|XP_002451453.1| hypothetical protein SORBIDRAFT_04g002190 [Sorghum bicolor]
gi|241931284|gb|EES04429.1| hypothetical protein SORBIDRAFT_04g002190 [Sorghum bicolor]
Length = 253
Score = 280 bits (717), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 127/157 (80%), Positives = 141/157 (89%)
Query: 91 FEDPKWVNGTWDLKQFQKNGQTDWDAVIDAEARRRKWLENSPESSSNDDPVIFDTSIVPW 150
F D +WVNGTWDL QF K G DWDAVIDAEARRRKWLE+ PE++S D+ V+FDTSI+PW
Sbjct: 96 FRDARWVNGTWDLTQFDKGGVVDWDAVIDAEARRRKWLEDYPEATSTDEAVVFDTSIIPW 155
Query: 151 WAWIKRFHLPEAELLNGRAAMIGFFMAYLVDSLTGVGLVDQMSNFFCKTLLFVAVVGVLL 210
WAW+KRFHLPEAE LNGRAAM+GFFMAY VDSLTGVGLVDQM NFFCKTLLFVAV GVLL
Sbjct: 156 WAWMKRFHLPEAEKLNGRAAMVGFFMAYFVDSLTGVGLVDQMGNFFCKTLLFVAVAGVLL 215
Query: 211 IRKNEDIETLKKLLEETTFYDKQWQATWQDETTSGAK 247
IRKNEDIE+LKKL++ETTFYDKQWQATWQD++T G K
Sbjct: 216 IRKNEDIESLKKLIDETTFYDKQWQATWQDDSTGGPK 252
>gi|255639271|gb|ACU19934.1| unknown [Glycine max]
Length = 240
Score = 280 bits (717), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 146/248 (58%), Positives = 174/248 (70%), Gaps = 34/248 (13%)
Query: 1 MSTSIDLLSFSPPPSSMLSRTQFSFTHKPTFLLSSKKESFFTLRASAADNGAGVSAPAVT 60
M++ L +FS PS ++ F H P F TLR+S A +
Sbjct: 1 MASFSPLTNFSTAPSPY---SKIGFFHNP----------FITLRSSNA---------LLR 38
Query: 61 VEEPKVREASEGPTESNGAVEAPEVKAVNKFEDPKWVNGTWDLKQFQKNGQTDWDAVIDA 120
+ KV +E T ++ FE+P+W+ GTWDLKQFQ NG TDWDAVIDA
Sbjct: 39 LSPLKVSADNEVATSASA------------FEEPRWIGGTWDLKQFQINGNTDWDAVIDA 86
Query: 121 EARRRKWLENSPESSSNDDPVIFDTSIVPWWAWIKRFHLPEAELLNGRAAMIGFFMAYLV 180
E +RRKWL ++PESS+ND+PV+F+T+I+PWWAWIKRFHLPEAELLNGRAAMIGFFMAY+V
Sbjct: 87 EVKRRKWLGDNPESSTNDNPVVFNTAIIPWWAWIKRFHLPEAELLNGRAAMIGFFMAYVV 146
Query: 181 DSLTGVGLVDQMSNFFCKTLLFVAVVGVLLIRKNEDIETLKKLLEETTFYDKQWQATWQD 240
DSLTGVG+VDQMSNFFCKTLLF AV G+LL+RKNEDIETLKKL EE TFYDKQWQATWQ
Sbjct: 147 DSLTGVGVVDQMSNFFCKTLLFTAVSGILLVRKNEDIETLKKLWEEITFYDKQWQATWQM 206
Query: 241 ETTSGAKK 248
+T KK
Sbjct: 207 KTQVLPKK 214
>gi|326516062|dbj|BAJ88054.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326531942|dbj|BAK01347.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 253
Score = 279 bits (713), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 136/201 (67%), Positives = 155/201 (77%), Gaps = 16/201 (7%)
Query: 64 PKVREASEGPTESNGAVEAPEVKAVN---------------KFEDPKWVNGTWDLKQF-Q 107
PK EA P SNG+ A KF+D +WVNGTWDL +F
Sbjct: 53 PKPAEADPSPAASNGSAAPAAPVAAAATPVAAAKAEAVASPKFQDSRWVNGTWDLSRFGN 112
Query: 108 KNGQTDWDAVIDAEARRRKWLENSPESSSNDDPVIFDTSIVPWWAWIKRFHLPEAELLNG 167
G DWDAVIDAEARRRKWLE+SPE+SS++D V+FDTSI+PWWAWIKRFHLPEAE LNG
Sbjct: 113 TGGAVDWDAVIDAEARRRKWLEDSPEASSSEDAVVFDTSIIPWWAWIKRFHLPEAEKLNG 172
Query: 168 RAAMIGFFMAYLVDSLTGVGLVDQMSNFFCKTLLFVAVVGVLLIRKNEDIETLKKLLEET 227
RAAM+GFFMAY VDSLTGVGLVDQM NFFCKTLLFVAV GVLL+RKNEDI+ LKKL++E+
Sbjct: 173 RAAMVGFFMAYFVDSLTGVGLVDQMGNFFCKTLLFVAVAGVLLVRKNEDIDNLKKLIDES 232
Query: 228 TFYDKQWQATWQDETTSGAKK 248
TFYDKQWQ+TWQD++TSG KK
Sbjct: 233 TFYDKQWQSTWQDDSTSGPKK 253
>gi|293334605|ref|NP_001167647.1| lil3 protein [Zea mays]
gi|194692076|gb|ACF80122.1| unknown [Zea mays]
gi|195608918|gb|ACG26289.1| lil3 protein [Zea mays]
gi|413935395|gb|AFW69946.1| lil3 protein [Zea mays]
Length = 246
Score = 278 bits (711), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 124/157 (78%), Positives = 140/157 (89%)
Query: 91 FEDPKWVNGTWDLKQFQKNGQTDWDAVIDAEARRRKWLENSPESSSNDDPVIFDTSIVPW 150
F D +WVNGTWDL +F K G DWDAVIDAEARRRKWLE+ PE++S DD V+FDTSI+PW
Sbjct: 89 FRDARWVNGTWDLTKFDKGGGVDWDAVIDAEARRRKWLEDYPEATSTDDAVVFDTSIIPW 148
Query: 151 WAWIKRFHLPEAELLNGRAAMIGFFMAYLVDSLTGVGLVDQMSNFFCKTLLFVAVVGVLL 210
WAW+KRFHLPEAE LNGRAAM+GFFMAY VDSLTGVGLVDQM NFFCKTLLFVAV GVLL
Sbjct: 149 WAWMKRFHLPEAEKLNGRAAMVGFFMAYFVDSLTGVGLVDQMGNFFCKTLLFVAVAGVLL 208
Query: 211 IRKNEDIETLKKLLEETTFYDKQWQATWQDETTSGAK 247
+RKNED+E+LKKL++ETTFYD+QWQATWQD+ T G K
Sbjct: 209 VRKNEDVESLKKLIDETTFYDRQWQATWQDDPTEGPK 245
>gi|226508526|ref|NP_001151867.1| lil3 protein [Zea mays]
gi|195650413|gb|ACG44674.1| lil3 protein [Zea mays]
Length = 250
Score = 278 bits (711), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 124/157 (78%), Positives = 140/157 (89%)
Query: 91 FEDPKWVNGTWDLKQFQKNGQTDWDAVIDAEARRRKWLENSPESSSNDDPVIFDTSIVPW 150
F D +WVNGTWDL +F K G DWDAVIDAEARRRKWLE+ PE++S DD V+FDTSI+PW
Sbjct: 93 FRDARWVNGTWDLTKFDKGGGVDWDAVIDAEARRRKWLEDYPEATSTDDAVVFDTSIIPW 152
Query: 151 WAWIKRFHLPEAELLNGRAAMIGFFMAYLVDSLTGVGLVDQMSNFFCKTLLFVAVVGVLL 210
WAW+KRFHLPEAE LNGRAAM+GFFMAY VDSLTGVGLVDQM NFFCKTLLFVAV GVLL
Sbjct: 153 WAWMKRFHLPEAEKLNGRAAMVGFFMAYFVDSLTGVGLVDQMGNFFCKTLLFVAVAGVLL 212
Query: 211 IRKNEDIETLKKLLEETTFYDKQWQATWQDETTSGAK 247
+RKNED+E+LKKL++ETTFYD+QWQATWQD+ T G K
Sbjct: 213 VRKNEDVESLKKLIDETTFYDRQWQATWQDDPTEGPK 249
>gi|116789792|gb|ABK25387.1| unknown [Picea sitchensis]
Length = 371
Score = 273 bits (698), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 119/160 (74%), Positives = 145/160 (90%)
Query: 90 KFEDPKWVNGTWDLKQFQKNGQTDWDAVIDAEARRRKWLENSPESSSNDDPVIFDTSIVP 149
+FED +W NGTW+++QF K+ + DWDAVIDAE RRRKWLE++PE+SSN DPV+FDTSIVP
Sbjct: 212 RFEDLRWENGTWNIQQFIKDNKVDWDAVIDAEVRRRKWLEDNPETSSNKDPVVFDTSIVP 271
Query: 150 WWAWIKRFHLPEAELLNGRAAMIGFFMAYLVDSLTGVGLVDQMSNFFCKTLLFVAVVGVL 209
WWAW+KRFHLP+AELLNGRAAMIGFFMAY +DSLTGVG+VDQ S+FF K LLFV +VGVL
Sbjct: 272 WWAWVKRFHLPQAELLNGRAAMIGFFMAYFIDSLTGVGIVDQTSSFFGKLLLFVTIVGVL 331
Query: 210 LIRKNEDIETLKKLLEETTFYDKQWQATWQDETTSGAKKE 249
LIRKNED+ET+K+L+ E+TFYD+QWQATWQDET+ ++KE
Sbjct: 332 LIRKNEDLETIKQLVRESTFYDQQWQATWQDETSQQSEKE 371
>gi|357146068|ref|XP_003573865.1| PREDICTED: uncharacterized protein LOC100830126 [Brachypodium
distachyon]
Length = 249
Score = 267 bits (682), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 125/166 (75%), Positives = 145/166 (87%), Gaps = 1/166 (0%)
Query: 84 EVKAVNKFEDPKWVNGTWDLKQF-QKNGQTDWDAVIDAEARRRKWLENSPESSSNDDPVI 142
E A +F D +WVNGTWDL F +K G DWDAVIDAEARRRKWLE+ PE+SS+D+ V+
Sbjct: 84 EESASPRFNDSRWVNGTWDLDLFGRKAGAVDWDAVIDAEARRRKWLEDFPEASSSDEAVV 143
Query: 143 FDTSIVPWWAWIKRFHLPEAELLNGRAAMIGFFMAYLVDSLTGVGLVDQMSNFFCKTLLF 202
FDTSI+PWWAWIKRFHLPEAE LNGRAAM+GFFMAY VDSLTGVGLVDQM NFFCKTLLF
Sbjct: 144 FDTSIIPWWAWIKRFHLPEAEKLNGRAAMVGFFMAYFVDSLTGVGLVDQMGNFFCKTLLF 203
Query: 203 VAVVGVLLIRKNEDIETLKKLLEETTFYDKQWQATWQDETTSGAKK 248
VAV GVLL+RKNEDI++LKKL++E+TFYDKQWQ+TWQ+++ S KK
Sbjct: 204 VAVAGVLLVRKNEDIDSLKKLIDESTFYDKQWQSTWQEDSPSVPKK 249
>gi|413926713|gb|AFW66645.1| lil3 protein [Zea mays]
Length = 239
Score = 263 bits (672), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 115/155 (74%), Positives = 135/155 (87%)
Query: 91 FEDPKWVNGTWDLKQFQKNGQTDWDAVIDAEARRRKWLENSPESSSNDDPVIFDTSIVPW 150
F D +WVNGTWDL +F K DWDAVIDAEARRR+WLE+ PE+++ D+ V+F TSI+PW
Sbjct: 82 FRDARWVNGTWDLAKFDKGSGVDWDAVIDAEARRRRWLEDYPEATNTDEAVVFATSIIPW 141
Query: 151 WAWIKRFHLPEAELLNGRAAMIGFFMAYLVDSLTGVGLVDQMSNFFCKTLLFVAVVGVLL 210
WAW+KRFHLPEAE LNGRAAM+GFFMAY VDSLTG GLVDQM NFFCKTLLF AV GVLL
Sbjct: 142 WAWMKRFHLPEAEKLNGRAAMVGFFMAYFVDSLTGAGLVDQMGNFFCKTLLFAAVAGVLL 201
Query: 211 IRKNEDIETLKKLLEETTFYDKQWQATWQDETTSG 245
+RKNED+E+LKKL++ETTFYD+QWQATWQD++ G
Sbjct: 202 VRKNEDVESLKKLVDETTFYDRQWQATWQDDSAGG 236
>gi|195607738|gb|ACG25699.1| lil3 protein [Zea mays]
Length = 239
Score = 263 bits (672), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 115/155 (74%), Positives = 135/155 (87%)
Query: 91 FEDPKWVNGTWDLKQFQKNGQTDWDAVIDAEARRRKWLENSPESSSNDDPVIFDTSIVPW 150
F D +WVNGTWDL +F K DWDAVIDAEARRR+WLE+ PE+++ D+ V+F TSI+PW
Sbjct: 82 FRDARWVNGTWDLAKFDKGSGVDWDAVIDAEARRRRWLEDYPEATNTDEAVVFATSIIPW 141
Query: 151 WAWIKRFHLPEAELLNGRAAMIGFFMAYLVDSLTGVGLVDQMSNFFCKTLLFVAVVGVLL 210
WAW+KRFHLPEAE LNGRAAM+GFFMAY VDSLTG GLVDQM NFFCKTLLF AV GVLL
Sbjct: 142 WAWMKRFHLPEAEKLNGRAAMVGFFMAYFVDSLTGAGLVDQMGNFFCKTLLFAAVAGVLL 201
Query: 211 IRKNEDIETLKKLLEETTFYDKQWQATWQDETTSG 245
+RKNED+E+LKKL++ETTFYD+QWQATWQD++ G
Sbjct: 202 VRKNEDVESLKKLVDETTFYDRQWQATWQDDSAGG 236
>gi|302821024|ref|XP_002992177.1| LHC-related protein [Selaginella moellendorffii]
gi|300140103|gb|EFJ06832.1| LHC-related protein [Selaginella moellendorffii]
Length = 232
Score = 260 bits (665), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 120/175 (68%), Positives = 147/175 (84%), Gaps = 3/175 (1%)
Query: 68 EASEGPTESNGAVEAPEVKAVN--KFEDPKWVNGTWDLKQFQKNGQTDWDAVIDAEARRR 125
EA+EG S A+ + AV+ KFEDP+W NG WD+ +F KNG+ DWDAVIDAE RR
Sbjct: 52 EAAEGKDPSPAAL-GKKSSAVSGEKFEDPRWKNGNWDMTKFVKNGKMDWDAVIDAEVLRR 110
Query: 126 KWLENSPESSSNDDPVIFDTSIVPWWAWIKRFHLPEAELLNGRAAMIGFFMAYLVDSLTG 185
KWLE +PE+SSNDDPV+FDT+ VPWWAW++RFHLPEAELLNGRAAM+GFF AYL+DSLTG
Sbjct: 111 KWLEENPEASSNDDPVLFDTATVPWWAWVRRFHLPEAELLNGRAAMVGFFAAYLIDSLTG 170
Query: 186 VGLVDQMSNFFCKTLLFVAVVGVLLIRKNEDIETLKKLLEETTFYDKQWQATWQD 240
VGLVDQ ++FF K LL + VVG+LL+RKNED+ET+K L++E+TFYDKQWQATW+D
Sbjct: 171 VGLVDQTNSFFGKLLLLITVVGILLVRKNEDLETIKTLVKESTFYDKQWQATWKD 225
>gi|302791046|ref|XP_002977290.1| LHC-related protein [Selaginella moellendorffii]
gi|300155266|gb|EFJ21899.1| LHC-related protein [Selaginella moellendorffii]
Length = 232
Score = 258 bits (659), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 119/175 (68%), Positives = 146/175 (83%), Gaps = 3/175 (1%)
Query: 68 EASEGPTESNGAVEAPEVKAVN--KFEDPKWVNGTWDLKQFQKNGQTDWDAVIDAEARRR 125
EA+EG S A+ + AV+ KFEDP+W NG WD+ +F KNG+ DWDAVIDAE RR
Sbjct: 52 EAAEGKDPSPAAL-GKKSSAVSGEKFEDPRWKNGNWDMTKFVKNGKMDWDAVIDAEVLRR 110
Query: 126 KWLENSPESSSNDDPVIFDTSIVPWWAWIKRFHLPEAELLNGRAAMIGFFMAYLVDSLTG 185
KWLE +PE+SSNDDPV+FDT+ VPWWAW++RFHLPEAELLNGRAAM+GFF AYL+DSLTG
Sbjct: 111 KWLEENPEASSNDDPVLFDTATVPWWAWVRRFHLPEAELLNGRAAMVGFFAAYLIDSLTG 170
Query: 186 VGLVDQMSNFFCKTLLFVAVVGVLLIRKNEDIETLKKLLEETTFYDKQWQATWQD 240
VGLVDQ ++F K LL + VVG+LL+RKNED+ET+K L++E+TFYDKQWQATW+D
Sbjct: 171 VGLVDQTNSFVGKLLLLITVVGILLVRKNEDLETIKTLVKESTFYDKQWQATWKD 225
>gi|359497612|ref|XP_003635583.1| PREDICTED: uncharacterized protein LOC100853827 [Vitis vinifera]
Length = 134
Score = 251 bits (640), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 116/133 (87%), Positives = 127/133 (95%)
Query: 117 VIDAEARRRKWLENSPESSSNDDPVIFDTSIVPWWAWIKRFHLPEAELLNGRAAMIGFFM 176
+ DAE RRRKWLE++PESSSNDDPV+FDTSI+PWWAWIKRFHLPEAELLNGRAAMIGFFM
Sbjct: 2 LYDAEVRRRKWLEDNPESSSNDDPVVFDTSIIPWWAWIKRFHLPEAELLNGRAAMIGFFM 61
Query: 177 AYLVDSLTGVGLVDQMSNFFCKTLLFVAVVGVLLIRKNEDIETLKKLLEETTFYDKQWQA 236
AYLVDSLTGVGLVDQM NFFCKTLLFVAVVGVLLIRKNED+ETLKKL++ETTFYDKQWQA
Sbjct: 62 AYLVDSLTGVGLVDQMGNFFCKTLLFVAVVGVLLIRKNEDLETLKKLVDETTFYDKQWQA 121
Query: 237 TWQDETTSGAKKE 249
+WQDET S +K +
Sbjct: 122 SWQDETPSSSKND 134
>gi|168006769|ref|XP_001756081.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692591|gb|EDQ78947.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 304
Score = 244 bits (623), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 108/157 (68%), Positives = 130/157 (82%)
Query: 89 NKFEDPKWVNGTWDLKQFQKNGQTDWDAVIDAEARRRKWLENSPESSSNDDPVIFDTSIV 148
KFEDP+W NGTWDL QF +G+TDWDA+IDAE RRK LE +PESSSNDD V+FDTSIV
Sbjct: 143 GKFEDPRWKNGTWDLSQFTTDGKTDWDAIIDAEVVRRKILEANPESSSNDDEVVFDTSIV 202
Query: 149 PWWAWIKRFHLPEAELLNGRAAMIGFFMAYLVDSLTGVGLVDQMSNFFCKTLLFVAVVGV 208
PWWAW+KRFHLPEAELLNGRAAMIG+ +LVD+ TG+GLVDQ ++F K L+F++VVGV
Sbjct: 203 PWWAWVKRFHLPEAELLNGRAAMIGYAAGWLVDAATGIGLVDQQNSFVGKILIFISVVGV 262
Query: 209 LLIRKNEDIETLKKLLEETTFYDKQWQATWQDETTSG 245
L IRKN D++ L+ L +E+T YDKQWQATW+D SG
Sbjct: 263 LAIRKNSDVDNLRTLAQESTDYDKQWQATWKDAKDSG 299
>gi|168061339|ref|XP_001782647.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665880|gb|EDQ52550.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 304
Score = 236 bits (601), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 103/154 (66%), Positives = 130/154 (84%)
Query: 87 AVNKFEDPKWVNGTWDLKQFQKNGQTDWDAVIDAEARRRKWLENSPESSSNDDPVIFDTS 146
++ F+DP+W NGTWDL QF +G+TDWDAVIDAE RRK LE +P SS+N+D V+FDTS
Sbjct: 141 SLGTFDDPRWKNGTWDLSQFTTDGKTDWDAVIDAEVVRRKILETNPVSSNNEDEVVFDTS 200
Query: 147 IVPWWAWIKRFHLPEAELLNGRAAMIGFFMAYLVDSLTGVGLVDQMSNFFCKTLLFVAVV 206
IVPWWAW+KRFHLPEAELLNGRAAMIG+ +LVD+ TG+GLVDQ ++FF K LLF++VV
Sbjct: 201 IVPWWAWVKRFHLPEAELLNGRAAMIGYASGWLVDAATGIGLVDQQNSFFGKLLLFISVV 260
Query: 207 GVLLIRKNEDIETLKKLLEETTFYDKQWQATWQD 240
GVL IRK D++T++ L +E+T+YDKQWQATW+D
Sbjct: 261 GVLAIRKTSDVDTIRDLAKESTYYDKQWQATWKD 294
>gi|168026465|ref|XP_001765752.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682929|gb|EDQ69343.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 385
Score = 235 bits (600), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 100/162 (61%), Positives = 127/162 (78%)
Query: 78 GAVEAPEVKAVNKFEDPKWVNGTWDLKQFQKNGQTDWDAVIDAEARRRKWLENSPESSSN 137
G P KFEDP+W GTWD+ +F +NG+ DWDAVIDAE RRKWLE +PE+S+N
Sbjct: 210 GKNATPASNGSGKFEDPRWSAGTWDITKFTRNGKIDWDAVIDAEVVRRKWLEENPETSNN 269
Query: 138 DDPVIFDTSIVPWWAWIKRFHLPEAELLNGRAAMIGFFMAYLVDSLTGVGLVDQMSNFFC 197
+PV+FDT+ VPWWAW+KRFHLPEAELLNGRAAM+G+ YLVDS TG GLVDQ S+F
Sbjct: 270 AEPVVFDTATVPWWAWVKRFHLPEAELLNGRAAMVGYAAGYLVDSATGYGLVDQQSSFLG 329
Query: 198 KTLLFVAVVGVLLIRKNEDIETLKKLLEETTFYDKQWQATWQ 239
K L+F ++GVLLIRK+ D+ ++ +++E+TFYDKQWQATW+
Sbjct: 330 KLLIFFTILGVLLIRKDSDVANIRTIVKESTFYDKQWQATWK 371
>gi|224155125|ref|XP_002337566.1| light harvesting protein 3 [Populus trichocarpa]
gi|222839577|gb|EEE77914.1| light harvesting protein 3 [Populus trichocarpa]
Length = 249
Score = 217 bits (553), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 99/194 (51%), Positives = 141/194 (72%), Gaps = 2/194 (1%)
Query: 50 NGAGVSAPAVTVEEPKVREASEGPTESNGAVE-APEVK-AVNKFEDPKWVNGTWDLKQFQ 107
N G ++ ++ K A+ G ++N +E E K +V KF D +W GTWDL F
Sbjct: 45 NVEGQRGVGMSEQQEKPALATGGSNKANDKLENGLETKHSVPKFIDERWKKGTWDLNMFV 104
Query: 108 KNGQTDWDAVIDAEARRRKWLENSPESSSNDDPVIFDTSIVPWWAWIKRFHLPEAELLNG 167
++G+ DWD +I+AEA+RRK +E P + +N++PV+F +SI+PWWAW+KR +LPEAELLNG
Sbjct: 105 RDGKMDWDGLIEAEAKRRKIIELYPNTCTNEEPVLFRSSIIPWWAWLKRSYLPEAELLNG 164
Query: 168 RAAMIGFFMAYLVDSLTGVGLVDQMSNFFCKTLLFVAVVGVLLIRKNEDIETLKKLLEET 227
RAAM+GFF AY+V+ LTG+ +V Q NF CKT+LFV V G++L R+ ED + L+KL++E
Sbjct: 165 RAAMVGFFAAYIVEGLTGLDMVGQTGNFICKTVLFVTVTGIILFRRTEDFKNLRKLVDEA 224
Query: 228 TFYDKQWQATWQDE 241
TFYDKQWQA+W+D+
Sbjct: 225 TFYDKQWQASWKDQ 238
>gi|449528459|ref|XP_004171222.1| PREDICTED: uncharacterized protein LOC101227616 [Cucumis sativus]
Length = 256
Score = 217 bits (552), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 92/150 (61%), Positives = 120/150 (80%)
Query: 90 KFEDPKWVNGTWDLKQFQKNGQTDWDAVIDAEARRRKWLENSPESSSNDDPVIFDTSIVP 149
+F D +W NGTWDL F +NG+ DW+ VI EA+RRK+LE PE+++N +PV+F +SI+P
Sbjct: 104 RFTDKRWKNGTWDLNMFVQNGKMDWEGVIVEEAKRRKFLEIHPEAATNQEPVVFRSSIIP 163
Query: 150 WWAWIKRFHLPEAELLNGRAAMIGFFMAYLVDSLTGVGLVDQMSNFFCKTLLFVAVVGVL 209
WW W+ + +LP+AELLNGRAAMIGFFM Y VD+LTGVG+V Q NF CKT LF+ V+GVL
Sbjct: 164 WWVWLTKSYLPQAELLNGRAAMIGFFMGYAVDALTGVGIVGQSGNFICKTALFLTVIGVL 223
Query: 210 LIRKNEDIETLKKLLEETTFYDKQWQATWQ 239
L R++EDIE L+ + EE TFYDKQWQ++WQ
Sbjct: 224 LFRQSEDIENLRNIAEEATFYDKQWQSSWQ 253
>gi|449458317|ref|XP_004146894.1| PREDICTED: uncharacterized protein LOC101203022 [Cucumis sativus]
Length = 220
Score = 216 bits (549), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 92/150 (61%), Positives = 120/150 (80%)
Query: 90 KFEDPKWVNGTWDLKQFQKNGQTDWDAVIDAEARRRKWLENSPESSSNDDPVIFDTSIVP 149
+F D +W NGTWDL F +NG+ DW+ VI EA+RRK+LE PE+++N +PV+F +SI+P
Sbjct: 68 RFTDKRWKNGTWDLNMFVQNGKMDWEGVIVEEAKRRKFLEIHPEAATNQEPVVFRSSIIP 127
Query: 150 WWAWIKRFHLPEAELLNGRAAMIGFFMAYLVDSLTGVGLVDQMSNFFCKTLLFVAVVGVL 209
WW W+ + +LP+AELLNGRAAMIGFFM Y VD+LTGVG+V Q NF CKT LF+ V+GVL
Sbjct: 128 WWVWLTKSYLPQAELLNGRAAMIGFFMGYAVDALTGVGIVGQSGNFICKTALFLTVIGVL 187
Query: 210 LIRKNEDIETLKKLLEETTFYDKQWQATWQ 239
L R++EDIE L+ + EE TFYDKQWQ++WQ
Sbjct: 188 LFRQSEDIENLRNIAEEATFYDKQWQSSWQ 217
>gi|225454884|ref|XP_002275690.1| PREDICTED: uncharacterized protein LOC100259582 [Vitis vinifera]
Length = 259
Score = 213 bits (543), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 91/152 (59%), Positives = 119/152 (78%)
Query: 90 KFEDPKWVNGTWDLKQFQKNGQTDWDAVIDAEARRRKWLENSPESSSNDDPVIFDTSIVP 149
KF D +W NGTWDL F ++G+ DWD VI AEARRRK+LE PES++N +PV+F +SI+P
Sbjct: 94 KFSDERWKNGTWDLNMFVRDGKMDWDGVIVAEARRRKFLEMYPESATNQEPVLFRSSIIP 153
Query: 150 WWAWIKRFHLPEAELLNGRAAMIGFFMAYLVDSLTGVGLVDQMSNFFCKTLLFVAVVGVL 209
WWAW+ R HL EAEL+NGRAAM+GFFMAYLVD+LTG+ +V Q N CK L V V+GV+
Sbjct: 154 WWAWMMRSHLQEAELINGRAAMVGFFMAYLVDALTGLDVVGQTGNLICKAGLLVTVMGVI 213
Query: 210 LIRKNEDIETLKKLLEETTFYDKQWQATWQDE 241
R+ +D ++L+KL +E T YDKQWQ++WQD+
Sbjct: 214 FFRRAQDFDSLRKLADEATLYDKQWQSSWQDQ 245
>gi|297737381|emb|CBI26582.3| unnamed protein product [Vitis vinifera]
Length = 226
Score = 211 bits (538), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 91/152 (59%), Positives = 119/152 (78%)
Query: 90 KFEDPKWVNGTWDLKQFQKNGQTDWDAVIDAEARRRKWLENSPESSSNDDPVIFDTSIVP 149
KF D +W NGTWDL F ++G+ DWD VI AEARRRK+LE PES++N +PV+F +SI+P
Sbjct: 61 KFSDERWKNGTWDLNMFVRDGKMDWDGVIVAEARRRKFLEMYPESATNQEPVLFRSSIIP 120
Query: 150 WWAWIKRFHLPEAELLNGRAAMIGFFMAYLVDSLTGVGLVDQMSNFFCKTLLFVAVVGVL 209
WWAW+ R HL EAEL+NGRAAM+GFFMAYLVD+LTG+ +V Q N CK L V V+GV+
Sbjct: 121 WWAWMMRSHLQEAELINGRAAMVGFFMAYLVDALTGLDVVGQTGNLICKAGLLVTVMGVI 180
Query: 210 LIRKNEDIETLKKLLEETTFYDKQWQATWQDE 241
R+ +D ++L+KL +E T YDKQWQ++WQD+
Sbjct: 181 FFRRAQDFDSLRKLADEATLYDKQWQSSWQDQ 212
>gi|307103578|gb|EFN51837.1| hypothetical protein CHLNCDRAFT_59785 [Chlorella variabilis]
Length = 250
Score = 206 bits (523), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 104/234 (44%), Positives = 144/234 (61%), Gaps = 23/234 (9%)
Query: 29 PTFLLSSKKESFFTLRASAADNGAGVSAPAVTVEEPKVREASEGPT-------------- 74
PT L + ++ ++R ++NGAG S + ++ K G T
Sbjct: 13 PTTLANRAQKR--SVRCEVSENGAGASTATLEKKDRKPSPLQRGGTLQGAAAAGKDASDK 70
Query: 75 ----ESNGAVEAPEVKAVN-KFEDPKWVNGTWDLKQF--QKNGQTDWDAVIDAEARRRKW 127
+ G P ++ V+ +FED +W G WDL F K G+T WD VIDAE RRK
Sbjct: 71 FKSMATGGKTGGPVLQMVDGRFEDYRWKGGRWDLSLFADSKTGETSWDDVIDAEMARRKL 130
Query: 128 LENSPESSSNDDPVIFDTSIVPWWAWIKRFHLPEAELLNGRAAMIGFFMAYLVDSLTGVG 187
LE+SP +N+DPV+FDT+ +PWWAW++RFHLPEAE LNGRAAM+G+ +A VD LTGVG
Sbjct: 131 LEDSPIPCTNEDPVLFDTAEIPWWAWVRRFHLPEAEKLNGRAAMMGYVLALFVDQLTGVG 190
Query: 188 LVDQMSNFFCKTLLFVAVVGVLLIRKNEDIETLKKLLEETTFYDKQWQATWQDE 241
L+DQ ++FF K LL V V G+L+ R + D+E K L++E TFYD+QW ATW+ +
Sbjct: 191 LLDQQNSFFGKVLLHVCVFGILIFRTSSDVERYKGLIDEATFYDRQWSATWEGQ 244
>gi|194466215|gb|ACF74338.1| putative Lil3 protein [Arachis hypogaea]
Length = 175
Score = 204 bits (518), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 106/189 (56%), Positives = 125/189 (66%), Gaps = 20/189 (10%)
Query: 7 LLSFSPPPSSMLSRTQFSFTHKPTFLLS-SKKESFFTLRASAADNGAGVSAPAVTVEEPK 65
+ SFSPP + + + P FL + S +F ++S A
Sbjct: 1 MASFSPPTHFPATTSTLTNRRNPVFLTTLSHTNNFSPFKSSLISEAA------------- 47
Query: 66 VREASEGPTESNGAVEA-----PEVKAVNKFEDPKWVNGTWDLKQFQKNGQTDWDAVIDA 120
E S P + NG+V A +V VN F DP+WV GTWDL QFQKNG TDWD+VIDA
Sbjct: 48 -TEPSPSPEQGNGSVAAVAPTTTKVPEVNPFGDPRWVGGTWDLTQFQKNGNTDWDSVIDA 106
Query: 121 EARRRKWLENSPESSSNDDPVIFDTSIVPWWAWIKRFHLPEAELLNGRAAMIGFFMAYLV 180
EA RRKWLE++PESSSND+PV+FDTSI+PWWAW+KRFHLPEAE LNGRAAMIGFFMAY V
Sbjct: 107 EASRRKWLEDNPESSSNDNPVVFDTSIIPWWAWMKRFHLPEAEQLNGRAAMIGFFMAYFV 166
Query: 181 DSLTGVGLV 189
DSLTGVGLV
Sbjct: 167 DSLTGVGLV 175
>gi|296090705|emb|CBI41107.3| unnamed protein product [Vitis vinifera]
Length = 113
Score = 197 bits (500), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 96/133 (72%), Positives = 107/133 (80%), Gaps = 21/133 (15%)
Query: 117 VIDAEARRRKWLENSPESSSNDDPVIFDTSIVPWWAWIKRFHLPEAELLNGRAAMIGFFM 176
+ DAE RRRKWLE++PESSSNDDPV+FDTSI+PWWAWIKRFHLPEAELLNGRAAMIGFFM
Sbjct: 2 LYDAEVRRRKWLEDNPESSSNDDPVVFDTSIIPWWAWIKRFHLPEAELLNGRAAMIGFFM 61
Query: 177 AYLVDSLTGVGLVDQMSNFFCKTLLFVAVVGVLLIRKNEDIETLKKLLEETTFYDKQWQA 236
AYLVDSLTGV VLLIRKNED+ETLKKL++ETTFYDKQWQA
Sbjct: 62 AYLVDSLTGV---------------------VLLIRKNEDLETLKKLVDETTFYDKQWQA 100
Query: 237 TWQDETTSGAKKE 249
+WQDET S +K +
Sbjct: 101 SWQDETPSSSKND 113
>gi|302854730|ref|XP_002958870.1| low molecular mass early light-induced protein [Volvox carteri f.
nagariensis]
gi|300255772|gb|EFJ40058.1| low molecular mass early light-induced protein [Volvox carteri f.
nagariensis]
Length = 250
Score = 194 bits (494), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 87/151 (57%), Positives = 110/151 (72%), Gaps = 1/151 (0%)
Query: 89 NKFEDPKWVNGTWDLKQFQKN-GQTDWDAVIDAEARRRKWLENSPESSSNDDPVIFDTSI 147
F D +WV G WDL QF+ + G+ DWD VIDAE RRK LE++P S N+DPV FDTS
Sbjct: 86 GHFRDDRWVGGRWDLNQFKDSTGEVDWDKVIDAEVARRKLLEDNPIPSINEDPVNFDTSE 145
Query: 148 VPWWAWIKRFHLPEAELLNGRAAMIGFFMAYLVDSLTGVGLVDQMSNFFCKTLLFVAVVG 207
+PWWAW++RFHLPEAE LNGRAAM+G+ +A VDSLTG GL++Q +F K L + V
Sbjct: 146 IPWWAWVRRFHLPEAEKLNGRAAMMGYVLALFVDSLTGAGLLEQQESFLGKLALHICVFA 205
Query: 208 VLLIRKNEDIETLKKLLEETTFYDKQWQATW 238
+LL+R + D++ K LL+E TFYDKQW ATW
Sbjct: 206 ILLVRSSADLDKYKGLLDEATFYDKQWNATW 236
>gi|159482731|ref|XP_001699421.1| low molecular mass early light-induced protein [Chlamydomonas
reinhardtii]
gi|54649970|dbj|BAD67136.1| Lhc-like protein Lhl3 [Chlamydomonas reinhardtii]
gi|158272872|gb|EDO98667.1| low molecular mass early light-induced protein [Chlamydomonas
reinhardtii]
Length = 249
Score = 193 bits (490), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 86/152 (56%), Positives = 111/152 (73%), Gaps = 2/152 (1%)
Query: 89 NKFEDPKWVNGTWDLKQFQ--KNGQTDWDAVIDAEARRRKWLENSPESSSNDDPVIFDTS 146
+F D +W++G WDL QF+ K G+ DWD VIDAE RRK LE++P S N++PV FDTS
Sbjct: 86 GRFRDDRWIDGRWDLSQFKSAKTGEVDWDLVIDAEVARRKLLEDNPIPSINEEPVNFDTS 145
Query: 147 IVPWWAWIKRFHLPEAELLNGRAAMIGFFMAYLVDSLTGVGLVDQMSNFFCKTLLFVAVV 206
+PWWAW+KRFHLPEAE LNGRAAM+G+ +A VDSL+G GL++Q +F K L V V
Sbjct: 146 EIPWWAWVKRFHLPEAEKLNGRAAMMGYVLALFVDSLSGAGLIEQQESFLGKLALHVCVF 205
Query: 207 GVLLIRKNEDIETLKKLLEETTFYDKQWQATW 238
+LL+R D++ K L++E TFYDKQW ATW
Sbjct: 206 AILLVRTTTDLDKYKGLIDEATFYDKQWNATW 237
>gi|255075991|ref|XP_002501670.1| light induced like protein [Micromonas sp. RCC299]
gi|226516934|gb|ACO62928.1| light induced like protein [Micromonas sp. RCC299]
Length = 238
Score = 191 bits (485), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 94/181 (51%), Positives = 121/181 (66%), Gaps = 6/181 (3%)
Query: 60 TVEEPKVREASEGPTESNGAVEAPEVKAVNKFEDPKWVNGTWDLKQFQ-KNGQTDWDAVI 118
T+E K G GA+ A ++ DP+WVNGTWDL QF+ NG+TDW+AVI
Sbjct: 54 TLEGEKAAGKDAGVAAKTGALFA---NGTQEWSDPRWVNGTWDLNQFKLPNGETDWNAVI 110
Query: 119 DAEARRRKWLENSPESSSNDDPVIFDTSIVPWWAWIKRFHLPEAELLNGRAAMIGFFMAY 178
DAE RK LE+ P + D+ +FDTSIVPWW W+KRFHLPEAE +NGRAAM+G+ AY
Sbjct: 111 DAEVVHRKALEDCP--AVYDEDGLFDTSIVPWWVWVKRFHLPEAEKINGRAAMVGYAFAY 168
Query: 179 LVDSLTGVGLVDQMSNFFCKTLLFVAVVGVLLIRKNEDIETLKKLLEETTFYDKQWQATW 238
L+D+ G GLVD +F KT +F+ V L +R+ ED++TL L +E TFYDKQW ATW
Sbjct: 169 LIDAAGGAGLVDLHQSFLGKTAIFLTVAFCLTVRRLEDLDTLNVLADEATFYDKQWNATW 228
Query: 239 Q 239
+
Sbjct: 229 E 229
>gi|384253230|gb|EIE26705.1| hypothetical protein COCSUDRAFT_64621 [Coccomyxa subellipsoidea
C-169]
Length = 200
Score = 190 bits (483), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 85/152 (55%), Positives = 115/152 (75%), Gaps = 3/152 (1%)
Query: 90 KFEDPKWVNGTWDLKQ--FQ-KNGQTDWDAVIDAEARRRKWLENSPESSSNDDPVIFDTS 146
K+ D +W+NG+WDL+ F+ ++G+ +WD VIDAE RR+ LE+SP S+N+DPV FDT+
Sbjct: 39 KYSDYRWINGSWDLESSAFKAQDGKVNWDLVIDAEMARRRLLEDSPIPSTNEDPVFFDTA 98
Query: 147 IVPWWAWIKRFHLPEAELLNGRAAMIGFFMAYLVDSLTGVGLVDQMSNFFCKTLLFVAVV 206
+PWWAW+KRFHLPEAE NGRAAM+G+F+AY VDS TG GL DQ ++F K L + V
Sbjct: 99 QIPWWAWVKRFHLPEAEKANGRAAMVGYFLAYFVDSWTGAGLYDQQNSFLGKLALHLVVF 158
Query: 207 GVLLIRKNEDIETLKKLLEETTFYDKQWQATW 238
+L+ R ++ + +LK LL+E TFYDKQWQA W
Sbjct: 159 AILIFRSSDSLASLKNLLDEATFYDKQWQANW 190
>gi|303286627|ref|XP_003062603.1| light induced like protein [Micromonas pusilla CCMP1545]
gi|226456120|gb|EEH53422.1| light induced like protein [Micromonas pusilla CCMP1545]
Length = 248
Score = 187 bits (475), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 86/150 (57%), Positives = 111/150 (74%), Gaps = 3/150 (2%)
Query: 91 FEDPKWVNGTWDLKQFQ-KNGQTDWDAVIDAEARRRKWLENSPESSSNDDPVIFDTSIVP 149
+ DP+WVNGTWDL QF+ +G+TDW+AVIDAE RK LE+ P + D+ +FDTSIVP
Sbjct: 92 WSDPRWVNGTWDLSQFKLADGETDWNAVIDAEVVHRKALEDCP--AVYDEDGLFDTSIVP 149
Query: 150 WWAWIKRFHLPEAELLNGRAAMIGFFMAYLVDSLTGVGLVDQMSNFFCKTLLFVAVVGVL 209
WW W+KRFHLPEAE +NGRAAM+G+ AYL+D+ G GLVD +F KT +FV V L
Sbjct: 150 WWVWVKRFHLPEAEKINGRAAMVGYAFAYLIDAAGGAGLVDLHQSFLGKTAIFVTVAFCL 209
Query: 210 LIRKNEDIETLKKLLEETTFYDKQWQATWQ 239
+R+ +D++TL L +E TFYDKQW ATW+
Sbjct: 210 FVRRLDDLDTLGVLADEATFYDKQWNATWE 239
>gi|88911208|gb|ABD58894.1| chloroplast Lhc-like protein 1 [Mesostigma viride]
Length = 280
Score = 184 bits (466), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 80/154 (51%), Positives = 117/154 (75%), Gaps = 3/154 (1%)
Query: 89 NKFEDPKWVN--GTWDLKQFQ-KNGQTDWDAVIDAEARRRKWLENSPESSSNDDPVIFDT 145
+FEDP+W+ GTWD ++F+ NG+TDWD+VIDAE RRRK LE++P +S+N++PV F+
Sbjct: 121 GRFEDPRWIKAAGTWDFEKFKLDNGETDWDSVIDAEVRRRKLLEDAPIASTNEEPVKFEL 180
Query: 146 SIVPWWAWIKRFHLPEAELLNGRAAMIGFFMAYLVDSLTGVGLVDQMSNFFCKTLLFVAV 205
S VP W W++RFHLP+AE++NGRAAMIGF A L + ++G LV Q +F K L + +
Sbjct: 181 STVPLWVWVRRFHLPQAEMINGRAAMIGFAWAMLWEKVSGQSLVSQFDSFGGKFFLILTL 240
Query: 206 VGVLLIRKNEDIETLKKLLEETTFYDKQWQATWQ 239
+G++L+RK ED++ L+ L +E +YDKQW+ATW+
Sbjct: 241 IGIMLVRKQEDLKELQNLTKELNYYDKQWEATWE 274
>gi|255539943|ref|XP_002511036.1| transcription factor, putative [Ricinus communis]
gi|223550151|gb|EEF51638.1| transcription factor, putative [Ricinus communis]
Length = 240
Score = 183 bits (464), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 87/187 (46%), Positives = 127/187 (67%), Gaps = 22/187 (11%)
Query: 73 PTESNGAVEA-------PEVKAVN-KFEDPKWVNGTWDLKQFQKNGQTDWDAVIDAEARR 124
P ++NG+ A PE ++ F D +W G WDL F K+ EA+R
Sbjct: 62 PLDANGSKRADDKSDHGPEAESSTPTFIDERWQMGNWDLNMFVKD-----------EAKR 110
Query: 125 RKWLENSPESSSNDDPVIFDTSIVPWWAWIKRFHLPEAELLNGRAAMIGFFMAYLVDSLT 184
RK+LE PE+S+N++PV+F +SI+PWW W+KR +LPEAEL+NGRAAM+GFFM+Y+VD+LT
Sbjct: 111 RKFLELYPEASTNEEPVLFRSSIIPWWVWLKRSYLPEAELINGRAAMVGFFMSYVVDALT 170
Query: 185 GVGLVDQMSNFFCKTLLFVAVVGVLLIRKNEDIETLKKLLEETTFYDKQWQATWQDE--- 241
G+ +V Q N CK L V V+ ++L+R+ ED + L+ L +E T YDKQWQ++W+D+
Sbjct: 171 GLDMVGQAGNLVCKAGLLVTVISIILLRRTEDFKNLRNLADEATLYDKQWQSSWKDQNAA 230
Query: 242 TTSGAKK 248
+TSG++K
Sbjct: 231 STSGSEK 237
>gi|308801589|ref|XP_003078108.1| Lhc-like protein Lhl3 (ISS) [Ostreococcus tauri]
gi|116056559|emb|CAL52848.1| Lhc-like protein Lhl3 (ISS) [Ostreococcus tauri]
Length = 209
Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 85/151 (56%), Positives = 111/151 (73%), Gaps = 3/151 (1%)
Query: 90 KFEDPKWVNGTWDLKQFQKN-GQTDWDAVIDAEARRRKWLENSPESSSNDDPVIFDTSIV 148
K+ DP+WVNG WDL+QF+ + G+ DWDAVIDAE RK LE+ P + D+ +FDTSIV
Sbjct: 51 KWSDPRWVNGNWDLEQFKNSAGEVDWDAVIDAEIVHRKMLEDCP--AVYDEDGLFDTSIV 108
Query: 149 PWWAWIKRFHLPEAELLNGRAAMIGFFMAYLVDSLTGVGLVDQMSNFFCKTLLFVAVVGV 208
PW W++RFHLPEAE NGRAAMIG+ AYL+D+ G GLVD ++F KT + V ++GV
Sbjct: 109 PWHVWMRRFHLPEAEKANGRAAMIGYAFAYLIDAAGGAGLVDLHNSFLGKTAILVTILGV 168
Query: 209 LLIRKNEDIETLKKLLEETTFYDKQWQATWQ 239
+IR +D++ LK L EE TFYDKQW A+W+
Sbjct: 169 TMIRSLKDLDMLKDLAEEATFYDKQWNASWE 199
>gi|145344198|ref|XP_001416624.1| possible early light inducible protein [Ostreococcus lucimarinus
CCE9901]
gi|144576850|gb|ABO94917.1| possible early light inducible protein [Ostreococcus lucimarinus
CCE9901]
Length = 170
Score = 169 bits (429), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 84/163 (51%), Positives = 113/163 (69%), Gaps = 6/163 (3%)
Query: 78 GAVEAPEVKAVNKFEDPKWVNGTWDLKQFQKN-GQTDWDAVIDAEARRRKWLENSPESSS 136
GA+ A E ++++DP+W NG WDL F+ G+ DWDAVIDAE RK LE++P +
Sbjct: 3 GAIFAGEQ---SQWKDPRWKNGNWDLDMFKNAAGEVDWDAVIDAEVVHRKMLEDNP--AV 57
Query: 137 NDDPVIFDTSIVPWWAWIKRFHLPEAELLNGRAAMIGFFMAYLVDSLTGVGLVDQMSNFF 196
D+ +FDTSIVPW W++RFHLPEAE NGRAAM+G+ AYL+D+ G GLVD ++F
Sbjct: 58 YDEDGLFDTSIVPWQVWMRRFHLPEAEKANGRAAMVGYAFAYLIDAAGGAGLVDLHNSFL 117
Query: 197 CKTLLFVAVVGVLLIRKNEDIETLKKLLEETTFYDKQWQATWQ 239
KT +F ++ V L+R +DI+ LK L E TFYDKQW A+W+
Sbjct: 118 GKTAIFATILFVTLVRSLKDIDNLKDLAAEATFYDKQWNASWE 160
>gi|412985699|emb|CCO19145.1| predicted protein [Bathycoccus prasinos]
Length = 231
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 80/155 (51%), Positives = 105/155 (67%), Gaps = 3/155 (1%)
Query: 86 KAVNKFEDPKWVNGTWDLKQFQK-NGQTDWDAVIDAEARRRKWLENSPESSSNDDPVIFD 144
K+ K+ED +WVNGTWDL QF K +G TDW+AVIDAE RK LE +P + D+ FD
Sbjct: 69 KSTQKWEDSRWVNGTWDLAQFAKADGTTDWNAVIDAEIVHRKMLEENP--AVYDEDGTFD 126
Query: 145 TSIVPWWAWIKRFHLPEAELLNGRAAMIGFFMAYLVDSLTGVGLVDQMSNFFCKTLLFVA 204
+PW W+ RFHLPEAE NGRAAM+G+ AYL+D+ T GLV+ +F KT +F
Sbjct: 127 LGQIPWQVWMMRFHLPEAEKANGRAAMVGYLFAYLIDAATHTGLVELHDSFLGKTAIFAT 186
Query: 205 VVGVLLIRKNEDIETLKKLLEETTFYDKQWQATWQ 239
V+ V +R+ D++ LK L +E TFYDKQWQ +W+
Sbjct: 187 VMFVCFVRQLSDLDNLKVLADEATFYDKQWQQSWE 221
>gi|224134286|ref|XP_002321782.1| light harvesting-like protein 3 [Populus trichocarpa]
gi|222868778|gb|EEF05909.1| light harvesting-like protein 3 [Populus trichocarpa]
Length = 134
Score = 163 bits (413), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 67/110 (60%), Positives = 92/110 (83%)
Query: 132 PESSSNDDPVIFDTSIVPWWAWIKRFHLPEAELLNGRAAMIGFFMAYLVDSLTGVGLVDQ 191
P + +N++PV+F +SI+PWWAW+KR +LPEAELLNGRAAM+GFF AY+V+ LTG+ +V Q
Sbjct: 10 PNTCTNEEPVLFRSSIIPWWAWLKRSYLPEAELLNGRAAMVGFFAAYIVEGLTGLDMVGQ 69
Query: 192 MSNFFCKTLLFVAVVGVLLIRKNEDIETLKKLLEETTFYDKQWQATWQDE 241
NF CKT+LFV V G++L R+ ED + L+KL++E TFYDKQWQA+W+D+
Sbjct: 70 TGNFICKTVLFVTVTGIILFRRTEDFKNLRKLVDEATFYDKQWQASWKDQ 119
>gi|290782564|gb|ADD62412.1| light harvesting-like protein 3 [Eucommia ulmoides]
Length = 81
Score = 151 bits (381), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 71/81 (87%), Positives = 75/81 (92%)
Query: 167 GRAAMIGFFMAYLVDSLTGVGLVDQMSNFFCKTLLFVAVVGVLLIRKNEDIETLKKLLEE 226
GRAAMIGFFMAYLVDSLTG+GLVDQM NFFCKTLL VAV GVLLIRKNED++TLKKLLEE
Sbjct: 1 GRAAMIGFFMAYLVDSLTGLGLVDQMGNFFCKTLLVVAVAGVLLIRKNEDLDTLKKLLEE 60
Query: 227 TTFYDKQWQATWQDETTSGAK 247
+TFYDKQWQATWQDET S K
Sbjct: 61 STFYDKQWQATWQDETASKKK 81
>gi|194708172|gb|ACF88170.1| unknown [Zea mays]
Length = 85
Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 67/81 (82%), Positives = 75/81 (92%)
Query: 167 GRAAMIGFFMAYLVDSLTGVGLVDQMSNFFCKTLLFVAVVGVLLIRKNEDIETLKKLLEE 226
GRAAM+GFFMAY VDSLTGVGLVDQM NFFCKTLLFVAV GVLL+RKNED+E+LKKL++E
Sbjct: 4 GRAAMVGFFMAYFVDSLTGVGLVDQMGNFFCKTLLFVAVAGVLLVRKNEDVESLKKLIDE 63
Query: 227 TTFYDKQWQATWQDETTSGAK 247
TTFYD+QWQATWQD+ T G K
Sbjct: 64 TTFYDRQWQATWQDDPTEGPK 84
>gi|413935396|gb|AFW69947.1| hypothetical protein ZEAMMB73_081697 [Zea mays]
Length = 178
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 58/77 (75%), Positives = 66/77 (85%)
Query: 91 FEDPKWVNGTWDLKQFQKNGQTDWDAVIDAEARRRKWLENSPESSSNDDPVIFDTSIVPW 150
F D +WVNGTWDL +F K G DWDAVIDAEARRRKWLE+ PE++S DD V+FDTSI+PW
Sbjct: 89 FRDARWVNGTWDLTKFDKGGGVDWDAVIDAEARRRKWLEDYPEATSTDDAVVFDTSIIPW 148
Query: 151 WAWIKRFHLPEAELLNG 167
WAW+KRFHLPEAE LNG
Sbjct: 149 WAWMKRFHLPEAEKLNG 165
>gi|326487872|dbj|BAJ89775.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 75
Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 49/63 (77%), Positives = 58/63 (92%)
Query: 186 VGLVDQMSNFFCKTLLFVAVVGVLLIRKNEDIETLKKLLEETTFYDKQWQATWQDETTSG 245
+ LVDQM NFFCKTLLFVAV GVLL+RKNEDI+ LKKL++E+TFYDKQWQ+TWQD++TSG
Sbjct: 13 LSLVDQMGNFFCKTLLFVAVAGVLLVRKNEDIDNLKKLIDESTFYDKQWQSTWQDDSTSG 72
Query: 246 AKK 248
KK
Sbjct: 73 PKK 75
>gi|78184603|ref|YP_377038.1| high light inducible protein [Synechococcus sp. CC9902]
gi|78168897|gb|ABB25994.1| possible high light inducible protein [Synechococcus sp. CC9902]
Length = 77
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 25/49 (51%), Positives = 32/49 (65%), Gaps = 4/49 (8%)
Query: 145 TSIVPWWAWIKRFHLPEAELLNGRAAMIGFFMAYLVDSLTGVGLVDQMS 193
T+ PW R L E ELLNGRAAM+GF A LV+ +TG G+V Q++
Sbjct: 23 TTARPW----NRSALAEVELLNGRAAMLGFMAAILVERVTGYGIVGQLT 67
>gi|116070468|ref|ZP_01467737.1| possible high light inducible protein [Synechococcus sp. BL107]
gi|116065873|gb|EAU71630.1| possible high light inducible protein [Synechococcus sp. BL107]
Length = 73
Score = 47.4 bits (111), Expect = 0.005, Method: Composition-based stats.
Identities = 24/49 (48%), Positives = 32/49 (65%), Gaps = 4/49 (8%)
Query: 145 TSIVPWWAWIKRFHLPEAELLNGRAAMIGFFMAYLVDSLTGVGLVDQMS 193
T+ PW R L E ELLNGRAAM+GF A +V+ +TG G+V Q++
Sbjct: 19 TTARPW----NRSALGEVELLNGRAAMLGFMAAIVVERITGYGIVGQLT 63
>gi|148243080|ref|YP_001228237.1| high light inducible protein [Synechococcus sp. RCC307]
gi|147851390|emb|CAK28884.1| High light inducible protein [Synechococcus sp. RCC307]
Length = 65
Score = 46.6 bits (109), Expect = 0.011, Method: Composition-based stats.
Identities = 22/42 (52%), Positives = 31/42 (73%)
Query: 152 AWIKRFHLPEAELLNGRAAMIGFFMAYLVDSLTGVGLVDQMS 193
A IK L +AELLNGRAAM+GF + L +++TG G+V Q++
Sbjct: 17 AQIKSERLEKAELLNGRAAMLGFVIGVLTEAITGHGIVSQIT 58
>gi|78213279|ref|YP_382058.1| high light inducible protein [Synechococcus sp. CC9605]
gi|78197738|gb|ABB35503.1| possible high light inducible protein [Synechococcus sp. CC9605]
Length = 65
Score = 45.8 bits (107), Expect = 0.015, Method: Composition-based stats.
Identities = 27/60 (45%), Positives = 37/60 (61%), Gaps = 5/60 (8%)
Query: 134 SSSNDDPVIFDTSIVPWWAWIKRFHLPEAELLNGRAAMIGFFMAYLVDSLTGVGLVDQMS 193
S+ NDD F ++ A I+ AELLNGRAAMIGF + L ++LTG G+V Q++
Sbjct: 4 STPNDD--WFQSAAA---AQIRNERFERAELLNGRAAMIGFVVGVLTEALTGHGIVSQIT 58
>gi|263865|gb|AAB25012.1| early light-inducible protein homolog [Onoclea sensibilis=sensitive
fern, spores, Peptide Partial, 230 aa]
Length = 230
Score = 44.3 bits (103), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Query: 163 ELLNGRAAMIGFFMAYLVDSLTGVGLVDQMSNFFCKTLL-FVAVVGVLLI 211
E +NGR AM+GF A +V+ +TG+G++DQ+ N LL F AVV + +
Sbjct: 127 ETINGRMAMVGFVWALVVEKMTGLGVMDQLFNPSTSGLLWFGAVVQLFTL 176
>gi|116075175|ref|ZP_01472435.1| possible high light inducible protein [Synechococcus sp. RS9916]
gi|116067372|gb|EAU73126.1| possible high light inducible protein [Synechococcus sp. RS9916]
Length = 66
Score = 43.9 bits (102), Expect = 0.065, Method: Composition-based stats.
Identities = 20/42 (47%), Positives = 29/42 (69%)
Query: 152 AWIKRFHLPEAELLNGRAAMIGFFMAYLVDSLTGVGLVDQMS 193
A IK + AELLNGR AM+GF + L +++TG G+V Q++
Sbjct: 18 AQIKTERMSRAELLNGRVAMLGFVIGVLTEAITGHGIVSQLT 59
>gi|88808269|ref|ZP_01123779.1| possible high light inducible protein [Synechococcus sp. WH 7805]
gi|88787257|gb|EAR18414.1| possible high light inducible protein [Synechococcus sp. WH 7805]
Length = 66
Score = 43.1 bits (100), Expect = 0.11, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
Query: 134 SSSNDDPVIFDTSIVPWWAWIKRFHLPEAELLNGRAAMIGFFMAYLVDSLTGVGLVDQMS 193
+SSN D D + A I+ + AELLNGR AM+GF + L ++LTG G++ Q++
Sbjct: 4 TSSNRDAWFQDAAA----AQIQGERMVRAELLNGRVAMLGFVIGVLTEALTGHGILSQIT 59
>gi|148239273|ref|YP_001224660.1| high light inducible protein [Synechococcus sp. WH 7803]
gi|147847812|emb|CAK23363.1| High light inducible protein [Synechococcus sp. WH 7803]
Length = 66
Score = 42.7 bits (99), Expect = 0.15, Method: Composition-based stats.
Identities = 20/42 (47%), Positives = 29/42 (69%)
Query: 152 AWIKRFHLPEAELLNGRAAMIGFFMAYLVDSLTGVGLVDQMS 193
A IK + AELLNGR AM+GF + L ++LTG G++ Q++
Sbjct: 18 AQIKGERMVRAELLNGRVAMLGFVIGVLTEALTGHGILSQIT 59
>gi|113952985|ref|YP_731635.1| high light inducible protein-related protein [Synechococcus sp.
CC9311]
gi|113880336|gb|ABI45294.1| possible high light inducible protein-related protein
[Synechococcus sp. CC9311]
Length = 65
Score = 42.4 bits (98), Expect = 0.17, Method: Composition-based stats.
Identities = 20/42 (47%), Positives = 30/42 (71%)
Query: 152 AWIKRFHLPEAELLNGRAAMIGFFMAYLVDSLTGVGLVDQMS 193
A I+ +AELLNGRAAM+GF + L +++TG G+V Q++
Sbjct: 17 AQIRSERFLKAELLNGRAAMLGFVIGVLTEAITGHGIVSQIT 58
>gi|260435579|ref|ZP_05789549.1| conserved domain protein [Synechococcus sp. WH 8109]
gi|260413453|gb|EEX06749.1| conserved domain protein [Synechococcus sp. WH 8109]
Length = 65
Score = 42.4 bits (98), Expect = 0.18, Method: Composition-based stats.
Identities = 25/60 (41%), Positives = 36/60 (60%), Gaps = 5/60 (8%)
Query: 134 SSSNDDPVIFDTSIVPWWAWIKRFHLPEAELLNGRAAMIGFFMAYLVDSLTGVGLVDQMS 193
S+SND+ F ++ A I+ AELLNGR AMIGF + L ++LTG G+ Q++
Sbjct: 4 STSNDE--WFQSAAA---AQIRSERFERAELLNGRVAMIGFVVGVLTEALTGHGIASQIT 58
>gi|87302471|ref|ZP_01085288.1| putative high light inducible protein [Synechococcus sp. WH 5701]
gi|87282815|gb|EAQ74772.1| putative high light inducible protein [Synechococcus sp. WH 5701]
Length = 78
Score = 42.0 bits (97), Expect = 0.25, Method: Composition-based stats.
Identities = 22/55 (40%), Positives = 30/55 (54%)
Query: 138 DDPVIFDTSIVPWWAWIKRFHLPEAELLNGRAAMIGFFMAYLVDSLTGVGLVDQM 192
+ PV +S P I L AEL NGRAAM+G + +V+ LTG G+ Q+
Sbjct: 3 NTPVNLPSSQEPTEQQIHMDQLKRAELFNGRAAMLGLVIGIVVEGLTGFGIAHQI 57
>gi|260435527|ref|ZP_05789497.1| conserved domain protein [Synechococcus sp. WH 8109]
gi|260413401|gb|EEX06697.1| conserved domain protein [Synechococcus sp. WH 8109]
Length = 73
Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 136 SNDDPVIFDTSIVPWWAWIKRFHLPEAELLNGRAAMIGFFMAYLVDSLTGVGLVDQMS 193
S ++P F S+ W R L + E LNGR AM+GF A +++ TG+G+V Q+
Sbjct: 7 SYEEPERFGESLTTARPW-NRSALTDVERLNGRVAMLGFLAAVVLEKATGLGIVGQLG 63
>gi|159486151|ref|XP_001701107.1| high intensity light-inducible lhc-like gene [Chlamydomonas
reinhardtii]
gi|54649972|dbj|BAD67137.1| Lhc-like protein Lhl4 [Chlamydomonas reinhardtii]
gi|54649974|dbj|BAD67138.1| Lhc-like protein Lhl4 [Chlamydomonas reinhardtii]
gi|158272001|gb|EDO97809.1| high intensity light-inducible lhc-like gene [Chlamydomonas
reinhardtii]
Length = 285
Score = 40.8 bits (94), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 26/39 (66%)
Query: 158 HLPEAELLNGRAAMIGFFMAYLVDSLTGVGLVDQMSNFF 196
+ E E+ NGRAAM+GF A LV++ TG G++ Q+ +
Sbjct: 235 YAREVEMTNGRAAMLGFLAAILVEAGTGEGIIRQIITYL 273
>gi|352094548|ref|ZP_08955719.1| hypothetical protein Syn8016DRAFT_1062 [Synechococcus sp. WH 8016]
gi|351680888|gb|EHA64020.1| hypothetical protein Syn8016DRAFT_1062 [Synechococcus sp. WH 8016]
Length = 78
Score = 40.4 bits (93), Expect = 0.65, Method: Composition-based stats.
Identities = 17/35 (48%), Positives = 24/35 (68%)
Query: 158 HLPEAELLNGRAAMIGFFMAYLVDSLTGVGLVDQM 192
L + EL NGRAAMIGF + + + LTG G++ Q+
Sbjct: 23 QLKKVELFNGRAAMIGFVIGVITEGLTGQGILHQI 57
>gi|113955174|ref|YP_731055.1| high light inducible protein [Synechococcus sp. CC9311]
gi|113882525|gb|ABI47483.1| putative high light inducible protein [Synechococcus sp. CC9311]
Length = 78
Score = 40.4 bits (93), Expect = 0.65, Method: Composition-based stats.
Identities = 17/35 (48%), Positives = 24/35 (68%)
Query: 158 HLPEAELLNGRAAMIGFFMAYLVDSLTGVGLVDQM 192
L + EL NGRAAMIGF + + + LTG G++ Q+
Sbjct: 23 QLKKVELFNGRAAMIGFVIGVITEGLTGQGILHQI 57
>gi|158334480|ref|YP_001515652.1| high light inducible protein [Acaryochloris marina MBIC11017]
gi|158304721|gb|ABW26338.1| high light inducible protein [Acaryochloris marina MBIC11017]
Length = 52
Score = 40.4 bits (93), Expect = 0.71, Method: Composition-based stats.
Identities = 17/35 (48%), Positives = 25/35 (71%)
Query: 162 AELLNGRAAMIGFFMAYLVDSLTGVGLVDQMSNFF 196
AE +GR AM GFF+A + + LTG G++ Q++ FF
Sbjct: 14 AETFSGRLAMYGFFIALITELLTGKGIIGQLTAFF 48
>gi|428217569|ref|YP_007102034.1| putative CAB/ELIP/HLIP family protein [Pseudanabaena sp. PCC 7367]
gi|427989351|gb|AFY69606.1| putative CAB/ELIP/HLIP family protein [Pseudanabaena sp. PCC 7367]
Length = 57
Score = 40.4 bits (93), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 18/29 (62%), Positives = 24/29 (82%)
Query: 162 AELLNGRAAMIGFFMAYLVDSLTGVGLVD 190
AE LNGRAAMIGF +A +++ +TG GL+D
Sbjct: 21 AERLNGRAAMIGFLIAVVIEFVTGQGLLD 49
>gi|87302884|ref|ZP_01085688.1| putative high light inducible protein [Synechococcus sp. WH 5701]
gi|87282380|gb|EAQ74339.1| putative high light inducible protein [Synechococcus sp. WH 5701]
Length = 78
Score = 40.0 bits (92), Expect = 0.78, Method: Composition-based stats.
Identities = 23/67 (34%), Positives = 31/67 (46%), Gaps = 18/67 (26%)
Query: 126 KWLENSPESSSNDDPVIFDTSIVPWWAWIKRFHLPEAELLNGRAAMIGFFMAYLVDSLTG 185
+WL+NS E I L AEL NGRAAM+G + +V+ LTG
Sbjct: 9 QWLQNSAEQ------------------LIHMEQLKRAELFNGRAAMLGIVIGIVVEGLTG 50
Query: 186 VGLVDQM 192
G+ Q+
Sbjct: 51 FGIAHQI 57
>gi|116075467|ref|ZP_01472727.1| putative high light inducible protein [Synechococcus sp. RS9916]
gi|116067664|gb|EAU73418.1| putative high light inducible protein [Synechococcus sp. RS9916]
Length = 78
Score = 40.0 bits (92), Expect = 0.78, Method: Composition-based stats.
Identities = 17/39 (43%), Positives = 26/39 (66%)
Query: 154 IKRFHLPEAELLNGRAAMIGFFMAYLVDSLTGVGLVDQM 192
I + L + E NGRAAM+GF + L ++LTG G++ Q+
Sbjct: 19 IHQEQLSQVERFNGRAAMLGFVIGVLTEALTGQGIIHQI 57
>gi|326492818|dbj|BAJ90265.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 192
Score = 40.0 bits (92), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 37/68 (54%), Gaps = 5/68 (7%)
Query: 157 FHLPEAELLNGRAAMIGFFMAYLVDSLTGVGLVDQMSN-----FFCKTLLFVAVVGVLLI 211
F P E +NGR AM+GF A V++ G GL+DQ+ + +F T +V ++ +
Sbjct: 86 FSGPAPERINGRLAMVGFVAALSVEAARGGGLLDQVGSGARLGWFLTTAAVFSVASLVPL 145
Query: 212 RKNEDIET 219
+ + +E+
Sbjct: 146 LQGQSVES 153
>gi|434391586|ref|YP_007126533.1| high light inducible protein [Gloeocapsa sp. PCC 7428]
gi|428263427|gb|AFZ29373.1| high light inducible protein [Gloeocapsa sp. PCC 7428]
Length = 70
Score = 40.0 bits (92), Expect = 0.94, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 24/36 (66%)
Query: 160 PEAELLNGRAAMIGFFMAYLVDSLTGVGLVDQMSNF 195
P AELLNGR AMIGF +++ +TG GL+ +N
Sbjct: 34 PHAELLNGRLAMIGFVSLLVLEVVTGQGLIGFFTNL 69
>gi|119284|sp|P14895.1|ELI5_HORVU RecName: Full=High molecular mass early light-inducible protein
HV58, chloroplastic; Short=ELIP; Flags: Precursor
gi|19025|emb|CAA33728.1| unnamed protein product [Hordeum vulgare subsp. vulgare]
Length = 231
Score = 40.0 bits (92), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 6/76 (7%)
Query: 157 FHLPEAELLNGRAAMIGFFMAYLVDSLTGVGLVDQMSNFFCKTLLFVAVVGVLLIRKNED 216
F P E +NGR AM+GF A V++ G GL+DQ+ + F+A GV
Sbjct: 124 FSGPAPERINGRLAMVGFVAALSVEAARGGGLLDQVGMWSSGLAWFLATAGVF------S 177
Query: 217 IETLKKLLEETTFYDK 232
+ +L LL+ + K
Sbjct: 178 VASLLPLLQGQSVESK 193
>gi|326509113|dbj|BAJ86949.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 192
Score = 40.0 bits (92), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 37/68 (54%), Gaps = 5/68 (7%)
Query: 157 FHLPEAELLNGRAAMIGFFMAYLVDSLTGVGLVDQMSN-----FFCKTLLFVAVVGVLLI 211
F P E +NGR AM+GF A V++ G GL+DQ+ + +F T +V ++ +
Sbjct: 86 FSGPAPERINGRLAMVGFVAALSVEAARGGGLLDQVGSGAGLGWFLTTAAVFSVASLVPL 145
Query: 212 RKNEDIET 219
+ + +E+
Sbjct: 146 VQGQSVES 153
>gi|303282139|ref|XP_003060361.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226457832|gb|EEH55130.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 285
Score = 39.7 bits (91), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 32/52 (61%), Gaps = 7/52 (13%)
Query: 158 HLPEAELLNGRAAMIGFFMAYLVDSLTGVGLVDQMSNFFCKTLLFVAVVGVL 209
+L + EL N R AM+GFF A L+++ TG G+ DQ+ +++ + GVL
Sbjct: 235 YLKKVELNNARWAMVGFFAAVLIEARTGAGVKDQL-------IMYAKMTGVL 279
>gi|302849018|ref|XP_002956040.1| hypothetical protein VOLCADRAFT_109992 [Volvox carteri f.
nagariensis]
gi|300258766|gb|EFJ43000.1| hypothetical protein VOLCADRAFT_109992 [Volvox carteri f.
nagariensis]
Length = 297
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 25/36 (69%)
Query: 161 EAELLNGRAAMIGFFMAYLVDSLTGVGLVDQMSNFF 196
+ EL NGRAAM+GF A LV++ TG G++ Q+ +
Sbjct: 250 DVELANGRAAMLGFLAAILVEAGTGQGIIMQIITYL 285
>gi|318041865|ref|ZP_07973821.1| putative high light inducible protein [Synechococcus sp. CB0101]
Length = 78
Score = 39.3 bits (90), Expect = 1.4, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 6/48 (12%)
Query: 151 WAW------IKRFHLPEAELLNGRAAMIGFFMAYLVDSLTGVGLVDQM 192
W W I L EL NGRAAM+G + L ++LTG G+ Q+
Sbjct: 10 WYWDRATQQIHMEQLKRVELFNGRAAMLGIVIGILTEALTGAGIAHQI 57
>gi|87302267|ref|ZP_01085092.1| putative high light inducible protein [Synechococcus sp. WH 5701]
gi|87283192|gb|EAQ75148.1| putative high light inducible protein [Synechococcus sp. WH 5701]
Length = 73
Score = 39.3 bits (90), Expect = 1.6, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 28/42 (66%), Gaps = 5/42 (11%)
Query: 151 WAWIKRFHLPEAELLNGRAAMIGFFMAYLVDSLTGVGLVDQM 192
W + +R AELLNGR AM+GF + LV++ +G G++ Q+
Sbjct: 30 WGFHRR-----AELLNGRLAMLGFVIGVLVEAFSGQGILHQI 66
>gi|78213003|ref|YP_381782.1| high light inducible protein [Synechococcus sp. CC9605]
gi|78197462|gb|ABB35227.1| possible high light inducible protein [Synechococcus sp. CC9605]
Length = 73
Score = 38.9 bits (89), Expect = 1.8, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 138 DDPVIFDTSIVPWWAWIKRFHLPEAELLNGRAAMIGFFMAYLVDSLTGVGLVDQM 192
++P F S+ W R L + E LNGR AM+GF A +++ TG+G+ Q+
Sbjct: 9 EEPERFGESLTTARPW-NRSALTDVERLNGRVAMLGFLAAVVLEKATGLGIAGQL 62
>gi|351723745|ref|NP_001235754.1| early light-induced protein [Glycine max]
gi|1778823|gb|AAC16403.1| early light-induced protein [Glycine max]
Length = 192
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 24/38 (63%)
Query: 157 FHLPEAELLNGRAAMIGFFMAYLVDSLTGVGLVDQMSN 194
F P E +NGR AMIGF A V+ G G+++Q+SN
Sbjct: 89 FSGPAPERINGRLAMIGFVAAMAVEVAIGQGVLEQISN 126
>gi|443328437|ref|ZP_21057034.1| Chlorophyll A-B binding protein [Xenococcus sp. PCC 7305]
gi|442791891|gb|ELS01381.1| Chlorophyll A-B binding protein [Xenococcus sp. PCC 7305]
Length = 56
Score = 38.9 bits (89), Expect = 1.9, Method: Composition-based stats.
Identities = 18/28 (64%), Positives = 23/28 (82%)
Query: 162 AELLNGRAAMIGFFMAYLVDSLTGVGLV 189
AE LNGRAAMIGF +A +++ LTG GL+
Sbjct: 23 AERLNGRAAMIGFTLAIVIEYLTGKGLL 50
>gi|113955568|ref|YP_731383.1| high light inducible protein-related protein [Synechococcus sp.
CC9311]
gi|113882919|gb|ABI47877.1| possible high light inducible protein-related protein
[Synechococcus sp. CC9311]
Length = 73
Score = 38.9 bits (89), Expect = 1.9, Method: Composition-based stats.
Identities = 16/32 (50%), Positives = 23/32 (71%)
Query: 162 AELLNGRAAMIGFFMAYLVDSLTGVGLVDQMS 193
AELLNGR AM+GF + ++LTG G++ Q +
Sbjct: 35 AELLNGRLAMLGFVIGLFTEALTGHGILSQFT 66
>gi|255627107|gb|ACU13898.1| unknown [Glycine max]
Length = 192
Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 24/38 (63%)
Query: 157 FHLPEAELLNGRAAMIGFFMAYLVDSLTGVGLVDQMSN 194
F P E +NGR AMIGF A V+ G G+++Q+SN
Sbjct: 89 FSGPAPERINGRLAMIGFVAAMAVEVAKGQGVLEQISN 126
>gi|359463984|ref|ZP_09252547.1| high light inducible protein [Acaryochloris sp. CCMEE 5410]
Length = 82
Score = 38.9 bits (89), Expect = 2.1, Method: Composition-based stats.
Identities = 17/35 (48%), Positives = 25/35 (71%)
Query: 162 AELLNGRAAMIGFFMAYLVDSLTGVGLVDQMSNFF 196
AE +GR AM GFF+A + + LTG G++ Q+S +F
Sbjct: 45 AETFSGRLAMYGFFIALVTEVLTGKGILGQLSAWF 79
>gi|427702282|ref|YP_007045504.1| Chlorophyll A-B binding protein [Cyanobium gracile PCC 6307]
gi|427345450|gb|AFY28163.1| Chlorophyll A-B binding protein [Cyanobium gracile PCC 6307]
Length = 96
Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Query: 145 TSIVPWWAWIKRFHLPEAELLNGRAAMIGFFMAYLVDSLTGVGLVDQMS 193
T+ PW R L E LNGR AMIGF A + ++ TG G+V Q+
Sbjct: 44 TTSRPW----NRSALAGVERLNGRVAMIGFLAALIGEAFTGRGIVGQLG 88
>gi|356568441|ref|XP_003552419.1| PREDICTED: chlorophyll a-b binding protein CP29.3,
chloroplastic-like [Glycine max]
Length = 278
Score = 38.5 bits (88), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 48/94 (51%), Gaps = 18/94 (19%)
Query: 154 IKRFHLPEAELLNGRAAMIGFFMAYLVDSLTGVGLVD-------QMSNFFCKTLLF---- 202
I+RF E EL++GR AM+G A +V++LTGV D + S++ L F
Sbjct: 135 IQRFR--ECELIHGRWAMLGALGALVVEALTGVAWQDAGKVELVEGSSYLGLPLPFSLTT 192
Query: 203 -----VAVVGVLLIRKNEDIETLKKLLEETTFYD 231
V V+G + ++N +++ K+L F+D
Sbjct: 193 LIWIEVIVIGYIEFQRNAELDPEKRLYPGGRFFD 226
>gi|254430464|ref|ZP_05044167.1| putative high light inducible protein [Cyanobium sp. PCC 7001]
gi|197624917|gb|EDY37476.1| putative high light inducible protein [Cyanobium sp. PCC 7001]
Length = 57
Score = 38.5 bits (88), Expect = 2.5, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 31/58 (53%), Gaps = 18/58 (31%)
Query: 131 SPESSSNDDPVIFDTSIVPWWAWIKRFHLPEAELLNGRAAMIGFFMAYLVDSLTGVGL 188
SPES S W + +R AELLNGR AM+GF + +V++L+G G+
Sbjct: 5 SPESESG-------------WGFHRR-----AELLNGRMAMLGFVIGLMVEALSGQGI 44
>gi|260435620|ref|ZP_05789590.1| conserved domain protein [Synechococcus sp. WH 8109]
gi|260413494|gb|EEX06790.1| conserved domain protein [Synechococcus sp. WH 8109]
Length = 78
Score = 38.5 bits (88), Expect = 2.5, Method: Composition-based stats.
Identities = 16/35 (45%), Positives = 23/35 (65%)
Query: 158 HLPEAELLNGRAAMIGFFMAYLVDSLTGVGLVDQM 192
L +AE NGRAAM+G + + + LTG G+V Q+
Sbjct: 23 QLKKAERFNGRAAMVGIVIGIITEGLTGAGIVHQI 57
>gi|33865983|ref|NP_897542.1| high light inducible protein [Synechococcus sp. WH 8102]
gi|33638958|emb|CAE07964.1| possible high light inducible protein [Synechococcus sp. WH 8102]
Length = 67
Score = 38.5 bits (88), Expect = 2.6, Method: Composition-based stats.
Identities = 18/38 (47%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Query: 155 KRFHLPEAELLNGRAAMIGFFMAYLVDSLTGVGLVDQM 192
+RF+ AELLNGR AM+GF + L + +TG G+ Q+
Sbjct: 24 ERFN--RAELLNGRIAMLGFLIGLLTELITGQGIASQI 59
>gi|427702171|ref|YP_007045393.1| hypothetical protein Cyagr_0866 [Cyanobium gracile PCC 6307]
gi|427345339|gb|AFY28052.1| hypothetical protein Cyagr_0866 [Cyanobium gracile PCC 6307]
Length = 97
Score = 38.5 bits (88), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Query: 157 FHLPEAELLNGRAAMIGFFMAYLVDSLTGVGLVDQMS 193
FH AE LNGR AM+GF + +++LTG G++ QM
Sbjct: 54 FH-GRAERLNGRLAMLGFGIGLTIEALTGSGILGQMG 89
>gi|427729590|ref|YP_007075827.1| Chlorophyll A-B binding protein [Nostoc sp. PCC 7524]
gi|427365509|gb|AFY48230.1| Chlorophyll A-B binding protein [Nostoc sp. PCC 7524]
Length = 70
Score = 38.5 bits (88), Expect = 2.8, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 23/34 (67%)
Query: 162 AELLNGRAAMIGFFMAYLVDSLTGVGLVDQMSNF 195
AE LNGR AMIGF V+ +TG GL+ ++NF
Sbjct: 37 AEKLNGRLAMIGFVSLIAVEVITGQGLIGWLTNF 70
>gi|357111391|ref|XP_003557497.1| PREDICTED: low molecular mass early light-inducible protein HV90,
chloroplastic-like [Brachypodium distachyon]
Length = 172
Score = 38.5 bits (88), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 5/71 (7%)
Query: 154 IKRFHLPEAELLNGRAAMIGFFMAYLVDSLTGVGLVDQMSN-----FFCKTLLFVAVVGV 208
I F P E +NGR AM+GF A V++ G GL+ Q + +F T ++V +
Sbjct: 63 ILSFSGPAPERINGRLAMVGFVAALSVEAARGGGLLSQAGSGAGMGWFLTTTALLSVASL 122
Query: 209 LLIRKNEDIET 219
+ + + + +E+
Sbjct: 123 VPLLQGQSVES 133
>gi|425459449|ref|ZP_18838935.1| Genome sequencing data, contig C311 [Microcystis aeruginosa PCC
9808]
gi|389822803|emb|CCI29452.1| Genome sequencing data, contig C311 [Microcystis aeruginosa PCC
9808]
Length = 56
Score = 38.5 bits (88), Expect = 2.9, Method: Composition-based stats.
Identities = 18/28 (64%), Positives = 22/28 (78%)
Query: 162 AELLNGRAAMIGFFMAYLVDSLTGVGLV 189
AE LNGRAAMIGF + L++ LTG GL+
Sbjct: 23 AERLNGRAAMIGFVITLLIEYLTGQGLL 50
>gi|166364945|ref|YP_001657218.1| CAB/ELIP/HLIP-related protein [Microcystis aeruginosa NIES-843]
gi|390437845|ref|ZP_10226362.1| Genome sequencing data, contig C311 [Microcystis sp. T1-4]
gi|422302656|ref|ZP_16390017.1| Genome sequencing data, contig C311 [Microcystis aeruginosa PCC
9806]
gi|425437893|ref|ZP_18818305.1| Genome sequencing data, contig C311 [Microcystis aeruginosa PCC
9432]
gi|425442899|ref|ZP_18823133.1| Genome sequencing data, contig C311 [Microcystis aeruginosa PCC
9717]
gi|425444998|ref|ZP_18825038.1| Genome sequencing data, contig C311 [Microcystis aeruginosa PCC
9443]
gi|425456882|ref|ZP_18836588.1| Genome sequencing data, contig C311 [Microcystis aeruginosa PCC
9807]
gi|425465516|ref|ZP_18844825.1| Genome sequencing data, contig C311 [Microcystis aeruginosa PCC
9809]
gi|425471758|ref|ZP_18850609.1| Genome sequencing data, contig C311 [Microcystis aeruginosa PCC
9701]
gi|443651819|ref|ZP_21130752.1| high light inducible protein [Microcystis aeruginosa DIANCHI905]
gi|159028525|emb|CAO87331.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
gi|166087318|dbj|BAG02026.1| CAB/ELIP/HLIP-related protein [Microcystis aeruginosa NIES-843]
gi|389677026|emb|CCH94000.1| Genome sequencing data, contig C311 [Microcystis aeruginosa PCC
9432]
gi|389715932|emb|CCH99766.1| Genome sequencing data, contig C311 [Microcystis aeruginosa PCC
9717]
gi|389735113|emb|CCI01333.1| Genome sequencing data, contig C311 [Microcystis aeruginosa PCC
9443]
gi|389788064|emb|CCI16572.1| Genome sequencing data, contig C311 [Microcystis aeruginosa PCC
9806]
gi|389801919|emb|CCI18976.1| Genome sequencing data, contig C311 [Microcystis aeruginosa PCC
9807]
gi|389832226|emb|CCI24334.1| Genome sequencing data, contig C311 [Microcystis aeruginosa PCC
9809]
gi|389838780|emb|CCI30486.1| Genome sequencing data, contig C311 [Microcystis sp. T1-4]
gi|389882262|emb|CCI37227.1| Genome sequencing data, contig C311 [Microcystis aeruginosa PCC
9701]
gi|443334460|gb|ELS48972.1| high light inducible protein [Microcystis aeruginosa DIANCHI905]
Length = 56
Score = 38.1 bits (87), Expect = 3.0, Method: Composition-based stats.
Identities = 18/28 (64%), Positives = 22/28 (78%)
Query: 162 AELLNGRAAMIGFFMAYLVDSLTGVGLV 189
AE LNGRAAMIGF + L++ LTG GL+
Sbjct: 23 AERLNGRAAMIGFVITLLIEYLTGQGLL 50
>gi|148242619|ref|YP_001227776.1| high light inducible protein [Synechococcus sp. RCC307]
gi|147850929|emb|CAK28423.1| High light inducible protein [Synechococcus sp. RCC307]
Length = 80
Score = 38.1 bits (87), Expect = 3.0, Method: Composition-based stats.
Identities = 17/41 (41%), Positives = 25/41 (60%)
Query: 152 AWIKRFHLPEAELLNGRAAMIGFFMAYLVDSLTGVGLVDQM 192
A I L + E NGRAAM+GF + + + LTG G++ Q+
Sbjct: 19 AQIHMEQLKDVERFNGRAAMLGFVIGVITEGLTGQGIIHQI 59
>gi|425450765|ref|ZP_18830588.1| Genome sequencing data, contig C311 [Microcystis aeruginosa PCC
7941]
gi|389768260|emb|CCI06586.1| Genome sequencing data, contig C311 [Microcystis aeruginosa PCC
7941]
Length = 56
Score = 38.1 bits (87), Expect = 3.1, Method: Composition-based stats.
Identities = 18/28 (64%), Positives = 22/28 (78%)
Query: 162 AELLNGRAAMIGFFMAYLVDSLTGVGLV 189
AE LNGRAAMIGF + L++ LTG GL+
Sbjct: 23 AERLNGRAAMIGFVITLLIEYLTGQGLL 50
>gi|326490886|dbj|BAJ90110.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326509401|dbj|BAJ91617.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326511553|dbj|BAJ91921.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 190
Score = 38.1 bits (87), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 37/68 (54%), Gaps = 5/68 (7%)
Query: 157 FHLPEAELLNGRAAMIGFFMAYLVDSLTGVGLVDQMSN-----FFCKTLLFVAVVGVLLI 211
F P E +NGR AM+GF A V++ G GL+DQ + +F T ++V ++ +
Sbjct: 84 FSGPAPERINGRLAMVGFVAALSVEAARGGGLLDQAGSGAGLGWFLVTAGLLSVASLVPL 143
Query: 212 RKNEDIET 219
+ + +E+
Sbjct: 144 LQGQSVES 151
>gi|172038496|ref|YP_001804997.1| putative CAB/ELIP/HLIP family protein [Cyanothece sp. ATCC 51142]
gi|354554159|ref|ZP_08973464.1| Chlorophyll A-B binding protein [Cyanothece sp. ATCC 51472]
gi|171699950|gb|ACB52931.1| putative CAB/ELIP/HLIP family protein [Cyanothece sp. ATCC 51142]
gi|353553838|gb|EHC23229.1| Chlorophyll A-B binding protein [Cyanothece sp. ATCC 51472]
Length = 58
Score = 38.1 bits (87), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 22/28 (78%)
Query: 162 AELLNGRAAMIGFFMAYLVDSLTGVGLV 189
AE LNGRAAM+GF + +++ LTG GL+
Sbjct: 25 AERLNGRAAMVGFLLILVIEYLTGQGLL 52
>gi|428212095|ref|YP_007085239.1| Chlorophyll A-B binding protein [Oscillatoria acuminata PCC 6304]
gi|428000476|gb|AFY81319.1| Chlorophyll A-B binding protein [Oscillatoria acuminata PCC 6304]
Length = 59
Score = 38.1 bits (87), Expect = 3.4, Method: Composition-based stats.
Identities = 18/28 (64%), Positives = 22/28 (78%)
Query: 162 AELLNGRAAMIGFFMAYLVDSLTGVGLV 189
AE LNGRAAMIGF + L++ LTG GL+
Sbjct: 26 AERLNGRAAMIGFALTLLIEYLTGQGLL 53
>gi|78214072|ref|YP_382851.1| high light inducible protein [Synechococcus sp. CC9605]
gi|78198531|gb|ABB36296.1| putative high light inducible protein [Synechococcus sp. CC9605]
Length = 78
Score = 38.1 bits (87), Expect = 3.4, Method: Composition-based stats.
Identities = 16/35 (45%), Positives = 23/35 (65%)
Query: 158 HLPEAELLNGRAAMIGFFMAYLVDSLTGVGLVDQM 192
L +AE NGRAAM+G + + + LTG G+V Q+
Sbjct: 23 QLKKAERFNGRAAMLGIVIGIITEGLTGAGIVHQI 57
>gi|126659595|ref|ZP_01730726.1| CAB/ELIP/HLIP-related protein [Cyanothece sp. CCY0110]
gi|126619138|gb|EAZ89876.1| CAB/ELIP/HLIP-related protein [Cyanothece sp. CCY0110]
Length = 58
Score = 38.1 bits (87), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 22/28 (78%)
Query: 162 AELLNGRAAMIGFFMAYLVDSLTGVGLV 189
AE LNGRAAM+GF + +++ LTG GL+
Sbjct: 25 AERLNGRAAMVGFLLILVIEYLTGQGLL 52
>gi|352094901|ref|ZP_08956072.1| hypothetical protein Syn8016DRAFT_1417 [Synechococcus sp. WH 8016]
gi|351681241|gb|EHA64373.1| hypothetical protein Syn8016DRAFT_1417 [Synechococcus sp. WH 8016]
Length = 67
Score = 38.1 bits (87), Expect = 3.6, Method: Composition-based stats.
Identities = 16/32 (50%), Positives = 24/32 (75%)
Query: 162 AELLNGRAAMIGFFMAYLVDSLTGVGLVDQMS 193
AELLNGR AM+G + L ++LTG G++ Q++
Sbjct: 29 AELLNGRLAMLGIVIGVLTEALTGHGILSQIT 60
>gi|434387735|ref|YP_007098346.1| Chlorophyll A-B binding protein [Chamaesiphon minutus PCC 6605]
gi|428018725|gb|AFY94819.1| Chlorophyll A-B binding protein [Chamaesiphon minutus PCC 6605]
Length = 52
Score = 38.1 bits (87), Expect = 3.8, Method: Composition-based stats.
Identities = 17/28 (60%), Positives = 20/28 (71%)
Query: 160 PEAELLNGRAAMIGFFMAYLVDSLTGVG 187
P AELLNGR AMIGF A + + +TG G
Sbjct: 17 PSAELLNGRLAMIGFVAALITELVTGQG 44
>gi|326508046|dbj|BAJ86766.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 211
Score = 37.7 bits (86), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 5/68 (7%)
Query: 157 FHLPEAELLNGRAAMIGFFMAYLVDSLTGVGLVDQMSN-----FFCKTLLFVAVVGVLLI 211
F P E +NGR AM+GF A V++ G GL+DQ + +F T +V ++ +
Sbjct: 105 FTGPAPERINGRLAMVGFVAALSVEAARGGGLLDQAGSGAGLGWFLTTAAVFSVASLVPL 164
Query: 212 RKNEDIET 219
+ + +E+
Sbjct: 165 LQGQSVES 172
>gi|318041585|ref|ZP_07973541.1| CAB/ELIP/HLIP superfamily protein [Synechococcus sp. CB0101]
Length = 55
Score = 37.7 bits (86), Expect = 3.9, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 25/34 (73%)
Query: 159 LPEAELLNGRAAMIGFFMAYLVDSLTGVGLVDQM 192
+P AE LNGR AM+GF +A ++L+G G++ Q+
Sbjct: 19 VPFAESLNGRLAMLGFVIAIATEALSGKGILGQL 52
>gi|428308013|ref|YP_007144838.1| hypothetical protein Cri9333_4548 [Crinalium epipsammum PCC 9333]
gi|428249548|gb|AFZ15328.1| hypothetical protein Cri9333_4548 [Crinalium epipsammum PCC 9333]
Length = 65
Score = 37.7 bits (86), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 25/37 (67%)
Query: 154 IKRFHLPEAELLNGRAAMIGFFMAYLVDSLTGVGLVD 190
I++ P AE+ NGR AMIGF +++ L+G G+VD
Sbjct: 19 IEQGFTPNAEVWNGRFAMIGFVSILIIEVLSGQGIVD 55
>gi|158334760|ref|YP_001515932.1| high light inducible protein [Acaryochloris marina MBIC11017]
gi|158305001|gb|ABW26618.1| high light inducible protein [Acaryochloris marina MBIC11017]
Length = 52
Score = 37.7 bits (86), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 26/35 (74%)
Query: 162 AELLNGRAAMIGFFMAYLVDSLTGVGLVDQMSNFF 196
AE +GR AM GFF+A + ++LTG G++ Q++ FF
Sbjct: 14 AETFSGRLAMWGFFVALVTEALTGKGILGQLTAFF 48
>gi|326488715|dbj|BAJ97969.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 210
Score = 37.7 bits (86), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 5/68 (7%)
Query: 157 FHLPEAELLNGRAAMIGFFMAYLVDSLTGVGLVDQMSN-----FFCKTLLFVAVVGVLLI 211
F P E +NGR AM+GF A V++ G GL+DQ + +F T +V ++ +
Sbjct: 104 FTGPAPERINGRLAMVGFVAALSVEAARGGGLLDQAGSGAGLGWFLTTAAVFSVASLVPL 163
Query: 212 RKNEDIET 219
+ + +E+
Sbjct: 164 LQGQSVES 171
>gi|86604929|ref|YP_473692.1| CAB/ELIP/HLIP family protein [Synechococcus sp. JA-3-3Ab]
gi|86608723|ref|YP_477485.1| CAB/ELIP/HLIP family protein [Synechococcus sp. JA-2-3B'a(2-13)]
gi|86553471|gb|ABC98429.1| CAB/ELIP/HLIP family protein [Synechococcus sp. JA-3-3Ab]
gi|86557265|gb|ABD02222.1| CAB/ELIP/HLIP family protein [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 50
Score = 37.7 bits (86), Expect = 4.1, Method: Composition-based stats.
Identities = 16/27 (59%), Positives = 23/27 (85%)
Query: 162 AELLNGRAAMIGFFMAYLVDSLTGVGL 188
AE LNGRAAMIGF +A +++++TG G+
Sbjct: 17 AERLNGRAAMIGFVLAIVIEAVTGQGV 43
>gi|443477051|ref|ZP_21066924.1| hypothetical protein Pse7429DRAFT_2805 [Pseudanabaena biceps PCC
7429]
gi|443017890|gb|ELS32240.1| hypothetical protein Pse7429DRAFT_2805 [Pseudanabaena biceps PCC
7429]
Length = 68
Score = 37.7 bits (86), Expect = 4.2, Method: Composition-based stats.
Identities = 18/35 (51%), Positives = 24/35 (68%)
Query: 160 PEAELLNGRAAMIGFFMAYLVDSLTGVGLVDQMSN 194
P AELLNGR AMIGF +++ TG GL+ ++N
Sbjct: 33 PYAELLNGRLAMIGFVSLLILEVFTGHGLIWWLTN 67
>gi|218245542|ref|YP_002370913.1| CAB/ELIP/HLIP-like protein [Cyanothece sp. PCC 8801]
gi|257058579|ref|YP_003136467.1| HLIP; single helix LHC light protein [Cyanothece sp. PCC 8802]
gi|218166020|gb|ACK64757.1| CAB/ELIP/HLIP-related protein [Cyanothece sp. PCC 8801]
gi|256588745|gb|ACU99631.1| HLIP; single helix LHC light protein [Cyanothece sp. PCC 8802]
Length = 58
Score = 37.7 bits (86), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 22/28 (78%)
Query: 162 AELLNGRAAMIGFFMAYLVDSLTGVGLV 189
AE LNGRAAM+GF + +++ LTG GL+
Sbjct: 25 AERLNGRAAMVGFVLTLVIEYLTGQGLL 52
>gi|148888429|gb|ABR15761.1| early light-inducible protein [Spirogyra varians]
Length = 183
Score = 37.7 bits (86), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 22/38 (57%)
Query: 157 FHLPEAELLNGRAAMIGFFMAYLVDSLTGVGLVDQMSN 194
F P E +NGR AM+GF A +V+ TG L Q+S
Sbjct: 80 FSGPAPETINGRLAMLGFTTALIVEKATGAPLTSQLSG 117
>gi|434398540|ref|YP_007132544.1| HLIP, single helix LHC light protein [Stanieria cyanosphaera PCC
7437]
gi|428269637|gb|AFZ35578.1| HLIP, single helix LHC light protein [Stanieria cyanosphaera PCC
7437]
Length = 56
Score = 37.7 bits (86), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 17/28 (60%), Positives = 22/28 (78%)
Query: 162 AELLNGRAAMIGFFMAYLVDSLTGVGLV 189
AE LNGRAAMIGF + +++ LTG GL+
Sbjct: 23 AERLNGRAAMIGFALTLVIEYLTGQGLL 50
>gi|186682831|ref|YP_001866027.1| high light inducible protein [Nostoc punctiforme PCC 73102]
gi|186465283|gb|ACC81084.1| CAB/ELIP/HLIP superfamily [Nostoc punctiforme PCC 73102]
Length = 71
Score = 37.7 bits (86), Expect = 4.4, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 23/36 (63%)
Query: 160 PEAELLNGRAAMIGFFMAYLVDSLTGVGLVDQMSNF 195
P AE+LNGR AMIGF ++ TG G+V ++N
Sbjct: 36 PYAEMLNGRLAMIGFISLIALEVFTGHGIVGVLANL 71
>gi|220908116|ref|YP_002483427.1| CAB/ELIP/HLIP-like protein [Cyanothece sp. PCC 7425]
gi|219864727|gb|ACL45066.1| CAB/ELIP/HLIP-related protein [Cyanothece sp. PCC 7425]
Length = 54
Score = 37.7 bits (86), Expect = 4.6, Method: Composition-based stats.
Identities = 17/28 (60%), Positives = 23/28 (82%)
Query: 162 AELLNGRAAMIGFFMAYLVDSLTGVGLV 189
AE LNGRAAMIGF +A L++ +TG G++
Sbjct: 21 AERLNGRAAMIGFTLALLIEYVTGQGIL 48
>gi|172054913|ref|YP_001806240.1| CAB/ELIP/HLIP family protein [Cyanothece sp. ATCC 51142]
gi|354555338|ref|ZP_08974640.1| Chlorophyll A-B binding protein [Cyanothece sp. ATCC 51472]
gi|354555606|ref|ZP_08974907.1| Chlorophyll A-B binding protein [Cyanothece sp. ATCC 51472]
gi|57864856|gb|AAW57031.1| putative high-light inducible protein [Cyanothece sp. ATCC 51142]
gi|171701194|gb|ACB54174.1| CAB/ELIP/HLIP family protein [Cyanothece sp. ATCC 51142]
gi|353552665|gb|EHC22060.1| Chlorophyll A-B binding protein [Cyanothece sp. ATCC 51472]
gi|353552929|gb|EHC22323.1| Chlorophyll A-B binding protein [Cyanothece sp. ATCC 51472]
Length = 70
Score = 37.7 bits (86), Expect = 4.6, Method: Composition-based stats.
Identities = 19/34 (55%), Positives = 22/34 (64%)
Query: 162 AELLNGRAAMIGFFMAYLVDSLTGVGLVDQMSNF 195
AE LNGR AMIGF +SLTG GLV ++N
Sbjct: 37 AEKLNGRLAMIGFISLLAFESLTGQGLVTWLTNL 70
>gi|30468136|ref|NP_849023.1| ELIP-like protein [Cyanidioschyzon merolae strain 10D]
gi|30409236|dbj|BAC76185.1| ELIP-like protein (chloroplast) [Cyanidioschyzon merolae strain
10D]
Length = 43
Score = 37.7 bits (86), Expect = 4.6, Method: Composition-based stats.
Identities = 16/28 (57%), Positives = 22/28 (78%)
Query: 162 AELLNGRAAMIGFFMAYLVDSLTGVGLV 189
AE+LNGR AM+GF A L ++LTG G++
Sbjct: 10 AEMLNGRLAMLGFVAALLTEALTGKGVL 37
>gi|37521012|ref|NP_924389.1| CAB/ELIP/HLIP-related protein [Gloeobacter violaceus PCC 7421]
gi|35212008|dbj|BAC89384.1| CAB/ELIP/HLIP-related protein [Gloeobacter violaceus PCC 7421]
Length = 52
Score = 37.7 bits (86), Expect = 5.0, Method: Composition-based stats.
Identities = 18/30 (60%), Positives = 22/30 (73%)
Query: 160 PEAELLNGRAAMIGFFMAYLVDSLTGVGLV 189
P AELLNGR AMIGF A +V+ TG G++
Sbjct: 17 PYAELLNGRLAMIGFAAALVVELATGKGVL 46
>gi|428201033|ref|YP_007079622.1| Chlorophyll A-B binding protein [Pleurocapsa sp. PCC 7327]
gi|427978465|gb|AFY76065.1| Chlorophyll A-B binding protein [Pleurocapsa sp. PCC 7327]
Length = 60
Score = 37.4 bits (85), Expect = 5.1, Method: Composition-based stats.
Identities = 17/28 (60%), Positives = 22/28 (78%)
Query: 162 AELLNGRAAMIGFFMAYLVDSLTGVGLV 189
AE LNGRAAMIGF + L++ +TG GL+
Sbjct: 27 AERLNGRAAMIGFVLTLLIEYITGKGLL 54
>gi|357461189|ref|XP_003600876.1| Chlorophyll a-b binding protein CP29.3 [Medicago truncatula]
gi|355489924|gb|AES71127.1| Chlorophyll a-b binding protein CP29.3 [Medicago truncatula]
Length = 278
Score = 37.4 bits (85), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 48/94 (51%), Gaps = 18/94 (19%)
Query: 154 IKRFHLPEAELLNGRAAMIGFFMAYLVDSLTGVGLVD-------QMSNFFCKTLLF---- 202
I+RF E E+++GR AM+G A V++ TGV D + S++F +L F
Sbjct: 135 IQRFR--ECEVIHGRWAMLGALGALAVEAFTGVAWQDAGKVELVEGSSYFGFSLPFSIST 192
Query: 203 -----VAVVGVLLIRKNEDIETLKKLLEETTFYD 231
V V+G + ++N +++ K+L F+D
Sbjct: 193 LIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFD 226
>gi|443323302|ref|ZP_21052310.1| Chlorophyll A-B binding protein [Gloeocapsa sp. PCC 73106]
gi|442787040|gb|ELR96765.1| Chlorophyll A-B binding protein [Gloeocapsa sp. PCC 73106]
Length = 56
Score = 37.4 bits (85), Expect = 5.4, Method: Composition-based stats.
Identities = 17/28 (60%), Positives = 22/28 (78%)
Query: 162 AELLNGRAAMIGFFMAYLVDSLTGVGLV 189
AE LNGRAAMIGF + L++ L+G GL+
Sbjct: 23 AERLNGRAAMIGFVLVILIEYLSGQGLL 50
>gi|158338118|ref|YP_001519294.1| high light inducible protein [Acaryochloris marina MBIC11017]
gi|158308359|gb|ABW29976.1| high light inducible protein [Acaryochloris marina MBIC11017]
Length = 51
Score = 37.4 bits (85), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 25/35 (71%)
Query: 162 AELLNGRAAMIGFFMAYLVDSLTGVGLVDQMSNFF 196
AE +GR AM GFF+A + + LTG G++ Q+S +F
Sbjct: 14 AETFSGRLAMYGFFIALVTEVLTGKGILGQLSAWF 48
>gi|356539957|ref|XP_003538459.1| PREDICTED: chlorophyll a-b binding protein CP29.3,
chloroplastic-like [Glycine max]
Length = 282
Score = 37.4 bits (85), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 18/94 (19%)
Query: 154 IKRFHLPEAELLNGRAAMIGFFMAYLVDSLTGVGLVD-------QMSNFFCKTLLF---- 202
I+RF E EL++GR AM+G A V++LTGV D + S++ L F
Sbjct: 139 IQRFR--ECELIHGRWAMLGSLGALAVEALTGVAWQDAGKVELVEGSSYLGLPLPFSLTT 196
Query: 203 -----VAVVGVLLIRKNEDIETLKKLLEETTFYD 231
V V+G + ++N +++ K+L F+D
Sbjct: 197 LIWIEVIVIGYIEFQRNAELDPEKRLYPGGRFFD 230
>gi|158336371|ref|YP_001517545.1| high light inducible protein [Acaryochloris marina MBIC11017]
gi|359459296|ref|ZP_09247859.1| high light inducible protein [Acaryochloris sp. CCMEE 5410]
gi|158306612|gb|ABW28229.1| high light inducible protein [Acaryochloris marina MBIC11017]
Length = 50
Score = 37.4 bits (85), Expect = 6.0, Method: Composition-based stats.
Identities = 16/32 (50%), Positives = 23/32 (71%)
Query: 162 AELLNGRAAMIGFFMAYLVDSLTGVGLVDQMS 193
AE GR AM+GFF+A + + LTG G+V Q++
Sbjct: 14 AETFGGRLAMMGFFLALVTEVLTGQGIVGQIA 45
>gi|146141282|gb|ABQ01425.1| early light inducible protein [Medicago falcata]
Length = 199
Score = 37.4 bits (85), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 22/38 (57%)
Query: 157 FHLPEAELLNGRAAMIGFFMAYLVDSLTGVGLVDQMSN 194
F P E +NGR AMIGF A V+ G GL DQ+S
Sbjct: 96 FGGPAPERINGRLAMIGFVAAMGVEIANGQGLFDQISG 133
>gi|172035518|ref|YP_001802019.1| CAB/ELIP/HLIP family protein [Cyanothece sp. ATCC 51142]
gi|171696972|gb|ACB49953.1| probable CAB/ELIP/HLIP family protein [Cyanothece sp. ATCC 51142]
Length = 91
Score = 37.4 bits (85), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 22/33 (66%)
Query: 162 AELLNGRAAMIGFFMAYLVDSLTGVGLVDQMSN 194
AE LNGR AMIGF +SLTG GLV ++N
Sbjct: 58 AEKLNGRLAMIGFISLLAFESLTGQGLVTWLTN 90
>gi|14487954|gb|AAK63815.1|AF383622_1 early light inducible protein [Medicago sativa]
Length = 199
Score = 37.4 bits (85), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 22/38 (57%)
Query: 157 FHLPEAELLNGRAAMIGFFMAYLVDSLTGVGLVDQMSN 194
F P E +NGR AMIGF A V+ G GL DQ+S
Sbjct: 96 FGGPAPERINGRLAMIGFVAAMGVEIANGQGLFDQISG 133
>gi|388495456|gb|AFK35794.1| unknown [Medicago truncatula]
Length = 191
Score = 37.0 bits (84), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 22/38 (57%)
Query: 157 FHLPEAELLNGRAAMIGFFMAYLVDSLTGVGLVDQMSN 194
F P E +NGR AMIGF A V+ G GL DQ+S
Sbjct: 88 FGGPAPERINGRLAMIGFVAAMGVEIAKGQGLFDQISG 125
>gi|33865865|ref|NP_897424.1| high light inducible protein [Synechococcus sp. WH 8102]
gi|33633035|emb|CAE07846.1| possible high light inducible protein [Synechococcus sp. WH 8102]
Length = 77
Score = 37.0 bits (84), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 138 DDPVIFDTSIVPWWAWIKRFHLPEAELLNGRAAMIGFFMAYLVDSLTGVGLVDQMSN 194
+ P F S+ W K L E LNGRAAM+GF A L + TG G+V Q++
Sbjct: 13 EQPERFGESLTTARPWNKS-ALTFVERLNGRAAMVGFSAAVLGELFTGQGIVGQLTG 68
>gi|326507762|dbj|BAJ86624.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326511667|dbj|BAJ91978.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 173
Score = 37.0 bits (84), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 49/106 (46%), Gaps = 7/106 (6%)
Query: 118 IDAEARRRKWLENSPESSSNDDPVIFDTSIVPWWAWIKRFHLPEAELLNGRAAMIGFFMA 177
+ A ARR + E S+ P S W A F P E +NGR AM+GF A
Sbjct: 30 MPALARRALVVRAQTEGPSSPQPSKPKASTSIWDAL--AFAGPAPERINGRLAMVGFVTA 87
Query: 178 YLVDSLTGVGLVDQMSN-----FFCKTLLFVAVVGVLLIRKNEDIE 218
V++ G GL+ Q+ + +F ++ ++V ++ + + E E
Sbjct: 88 LAVEAGRGDGLLSQLGSGTGQAWFAYSVAVLSVASLVPLLQGESAE 133
>gi|358347178|ref|XP_003637637.1| Early light inducible protein [Medicago truncatula]
gi|355503572|gb|AES84775.1| Early light inducible protein [Medicago truncatula]
Length = 160
Score = 37.0 bits (84), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 22/38 (57%)
Query: 157 FHLPEAELLNGRAAMIGFFMAYLVDSLTGVGLVDQMSN 194
F P E +NGR AMIGF A V+ G GL DQ+S
Sbjct: 63 FGGPAPERINGRLAMIGFVAAMGVEIAKGQGLFDQISG 100
>gi|443476766|ref|ZP_21066655.1| CAB/ELIP/HLIP-related protein [Pseudanabaena biceps PCC 7429]
gi|443018232|gb|ELS32520.1| CAB/ELIP/HLIP-related protein [Pseudanabaena biceps PCC 7429]
Length = 57
Score = 37.0 bits (84), Expect = 7.9, Method: Composition-based stats.
Identities = 17/28 (60%), Positives = 22/28 (78%)
Query: 162 AELLNGRAAMIGFFMAYLVDSLTGVGLV 189
AE LNGRAAMIGF +A ++ +TG GL+
Sbjct: 21 AERLNGRAAMIGFIIAVAIELVTGKGLL 48
>gi|388515963|gb|AFK46043.1| unknown [Medicago truncatula]
Length = 200
Score = 37.0 bits (84), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 22/38 (57%)
Query: 157 FHLPEAELLNGRAAMIGFFMAYLVDSLTGVGLVDQMSN 194
F P E +NGR AMIGF A V+ G GL DQ+S
Sbjct: 97 FGGPAPERINGRLAMIGFVAAMGVEIAKGQGLFDQISG 134
>gi|357111387|ref|XP_003557495.1| PREDICTED: high molecular mass early light-inducible protein HV58,
chloroplastic-like [Brachypodium distachyon]
Length = 188
Score = 37.0 bits (84), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 36/68 (52%), Gaps = 5/68 (7%)
Query: 157 FHLPEAELLNGRAAMIGFFMAYLVDSLTGVGLVDQMSN-----FFCKTLLFVAVVGVLLI 211
F P E +NGR AM+GF A V++ G GL+ Q + +F T ++V ++ +
Sbjct: 82 FSGPAPERINGRLAMVGFVAALSVEAARGGGLLSQAGSGAGLGWFLTTTALLSVASLVPL 141
Query: 212 RKNEDIET 219
+ + +E+
Sbjct: 142 LQGQSVES 149
>gi|357119243|ref|XP_003561354.1| PREDICTED: high molecular mass early light-inducible protein HV58,
chloroplastic-like [Brachypodium distachyon]
Length = 264
Score = 36.6 bits (83), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 36/68 (52%), Gaps = 5/68 (7%)
Query: 157 FHLPEAELLNGRAAMIGFFMAYLVDSLTGVGLVDQMSN-----FFCKTLLFVAVVGVLLI 211
F P E +NGR AM+GF A V++ G GL+ Q + +F T ++V ++ +
Sbjct: 158 FSGPAPERINGRLAMVGFVAALSVEAARGGGLLSQAGSGAGLGWFLTTTALLSVASLVPL 217
Query: 212 RKNEDIET 219
+ + +E+
Sbjct: 218 LQGQSVES 225
>gi|434393236|ref|YP_007128183.1| high light inducible protein [Gloeocapsa sp. PCC 7428]
gi|428265077|gb|AFZ31023.1| high light inducible protein [Gloeocapsa sp. PCC 7428]
Length = 59
Score = 36.6 bits (83), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 22/31 (70%)
Query: 160 PEAELLNGRAAMIGFFMAYLVDSLTGVGLVD 190
P+AE+ NGR AMIGF A L++ +G G++
Sbjct: 24 PQAEIWNGRLAMIGFLAAVLIELFSGQGVLH 54
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.315 0.130 0.391
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,102,282,941
Number of Sequences: 23463169
Number of extensions: 168309416
Number of successful extensions: 489603
Number of sequences better than 100.0: 181
Number of HSP's better than 100.0 without gapping: 134
Number of HSP's successfully gapped in prelim test: 47
Number of HSP's that attempted gapping in prelim test: 489386
Number of HSP's gapped (non-prelim): 216
length of query: 249
length of database: 8,064,228,071
effective HSP length: 139
effective length of query: 110
effective length of database: 9,097,814,876
effective search space: 1000759636360
effective search space used: 1000759636360
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 75 (33.5 bits)