Citrus Sinensis ID: 025672
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 249 | 2.2.26 [Sep-21-2011] | |||||||
| Q9LTV6 | 298 | Peroxisomal 2,4-dienoyl-C | yes | no | 1.0 | 0.835 | 0.775 | 6e-98 | |
| Q5RBV3 | 292 | Peroxisomal 2,4-dienoyl-C | yes | no | 0.931 | 0.794 | 0.415 | 3e-40 | |
| Q9NUI1 | 292 | Peroxisomal 2,4-dienoyl-C | yes | no | 0.931 | 0.794 | 0.411 | 4e-40 | |
| Q6NV34 | 300 | Peroxisomal 2,4-dienoyl-C | yes | no | 0.935 | 0.776 | 0.414 | 1e-39 | |
| Q9WV68 | 292 | Peroxisomal 2,4-dienoyl-C | yes | no | 0.931 | 0.794 | 0.427 | 2e-37 | |
| Q9Z2M4 | 292 | Peroxisomal 2,4-dienoyl-C | yes | no | 0.927 | 0.791 | 0.413 | 1e-35 | |
| O34717 | 254 | Probable 2,4-dienoyl-CoA | yes | no | 0.923 | 0.905 | 0.357 | 5e-34 | |
| P32573 | 292 | Peroxisomal 2,4-dienoyl-C | yes | no | 0.943 | 0.804 | 0.366 | 5e-33 | |
| Q9WYG0 | 251 | Uncharacterized oxidoredu | yes | no | 0.895 | 0.888 | 0.331 | 1e-26 | |
| Q9CQ62 | 335 | 2,4-dienoyl-CoA reductase | no | no | 0.927 | 0.689 | 0.327 | 2e-25 |
| >sp|Q9LTV6|DECR2_ARATH Peroxisomal 2,4-dienoyl-CoA reductase OS=Arabidopsis thaliana GN=At3g12800 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 357 bits (915), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 193/249 (77%), Positives = 216/249 (86%)
Query: 1 MESPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG 60
M+SPFK D+++G+VAL+TGGGSGIGFEIS Q GKHGA+IAIMGRRK VL AV+AL SLG
Sbjct: 1 MDSPFKPDVVRGQVALITGGGSGIGFEISSQFGKHGASIAIMGRRKQVLDDAVSALRSLG 60
Query: 61 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID 120
I AIGLEGDVRK+EDA RVVE+T HFGKLDILVNAAAGNFL AEDLSPNGFRTV++ID
Sbjct: 61 IQAIGLEGDVRKQEDARRVVEATFQHFGKLDILVNAAAGNFLAAAEDLSPNGFRTVLDID 120
Query: 121 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSIT 180
+VGTF MCH ALKYLKKG G+ SSS GG IINISATLHYTA+WYQIHVSAAKAAVD+ T
Sbjct: 121 AVGTFNMCHAALKYLKKGAPGRDSSSGGGSIINISATLHYTASWYQIHVSAAKAAVDATT 180
Query: 181 RSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAA 240
R+LALEWGTDY IRVNGIAPGPI T G+SKL PEEI +K +YM YK GEKWDIAMAA
Sbjct: 181 RNLALEWGTDYDIRVNGIAPGPIGGTPGMSKLVPEEIENKTREYMPLYKVGEKWDIAMAA 240
Query: 241 LYLASDAGQ 249
LYL+ D+G+
Sbjct: 241 LYLSCDSGK 249
|
Auxiliary enzyme of beta-oxidation. Participates in the degradation of unsaturated fatty enoyl-CoA esters having double bonds in both even- and odd-numbered positions in peroxisome. Catalyzes the NADP-dependent reduction of 2,4-dienoyl-CoA to yield trans-3-enoyl-CoA. Arabidopsis thaliana (taxid: 3702) EC: 1EC: .EC: 3EC: .EC: 1EC: .EC: 3EC: 4 |
| >sp|Q5RBV3|DECR2_PONAB Peroxisomal 2,4-dienoyl-CoA reductase OS=Pongo abelii GN=DECR2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 165 bits (417), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 101/243 (41%), Positives = 136/243 (55%), Gaps = 11/243 (4%)
Query: 5 FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR-KTVLRSAVAALHSLGIPA 63
F D+L+ KVA +TGGGSGIGF I+ +HG I R VL +A + G
Sbjct: 21 FCPDLLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRC 80
Query: 64 IGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVG 123
+ L DVR V V+ + FG++DIL+N AAGNFL PA LS N F+TV++ID+ G
Sbjct: 81 LPLSMDVRAPPAIVAAVDQALKEFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSG 140
Query: 124 TFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSL 183
TF + + + GG+I+NI+ATL Q+H +AKAAVD++TR L
Sbjct: 141 TFNVSRVLYEKFFR--------DHGGVIVNITATLGNRGQALQVHAGSAKAAVDAMTRHL 192
Query: 184 ALEWGTDYAIRVNGIAPGPIKDTAGVSKL-APEEIRSKATDYMAAYKFGEKWDIAMAALY 242
A+EWG IRVN +APGPI T G+ +L P+ S + G K +IA + LY
Sbjct: 193 AVEWGPQN-IRVNSLAPGPISGTEGLRRLGGPQASLSTKVTASPLQRLGNKTEIAHSVLY 251
Query: 243 LAS 245
LAS
Sbjct: 252 LAS 254
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Auxiliary enzyme of beta-oxidation. Participates in the degradation of unsaturated fatty enoyl-CoA esters having double bonds in both even- and odd-numbered positions in peroxisome. Catalyzes the NADP-dependent reduction of 2,4-dienoyl-CoA to yield trans-3-enoyl-CoA. Has activity towards short and medium chain 2,4-dienoyl-CoAs, but also towards 2,4,7,10,13,16,19-docosaheptaenoyl-CoA, suggesting that it does not constitute a rate limiting step in the peroxisomal degradation of docosahexaenoic acid. Pongo abelii (taxid: 9601) EC: 1 EC: . EC: 3 EC: . EC: 1 EC: . EC: 3 EC: 4 |
| >sp|Q9NUI1|DECR2_HUMAN Peroxisomal 2,4-dienoyl-CoA reductase OS=Homo sapiens GN=DECR2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 164 bits (416), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 100/243 (41%), Positives = 136/243 (55%), Gaps = 11/243 (4%)
Query: 5 FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR-KTVLRSAVAALHSLGIPA 63
F D+L+ KVA +TGGGSGIGF I+ +HG I R VL +A + G
Sbjct: 21 FCPDLLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRC 80
Query: 64 IGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVG 123
+ L DVR + V+ + FG++DIL+N AAGNFL PA LS N F+TV++ID+ G
Sbjct: 81 LPLSMDVRAPPAVMAAVDQALKEFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSG 140
Query: 124 TFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSL 183
TF + + + GG+I+NI+ATL Q+H +AKAAVD++TR L
Sbjct: 141 TFNVSRVLYEKFFR--------DHGGVIVNITATLGNRGQALQVHAGSAKAAVDAMTRHL 192
Query: 184 ALEWGTDYAIRVNGIAPGPIKDTAGVSKL-APEEIRSKATDYMAAYKFGEKWDIAMAALY 242
A+EWG IRVN +APGPI T G+ +L P+ S + G K +IA + LY
Sbjct: 193 AVEWGPQN-IRVNSLAPGPISGTEGLRRLGGPQASLSTKVTASPLQRLGNKTEIAHSVLY 251
Query: 243 LAS 245
LAS
Sbjct: 252 LAS 254
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Auxiliary enzyme of beta-oxidation. Participates in the degradation of unsaturated fatty enoyl-CoA esters having double bonds in both even- and odd-numbered positions in peroxisome. Catalyzes the NADP-dependent reduction of 2,4-dienoyl-CoA to yield trans-3-enoyl-CoA. Has activity towards short and medium chain 2,4-dienoyl-CoAs, but also towards 2,4,7,10,13,16,19-docosaheptaenoyl-CoA, suggesting that it does not constitute a rate limiting step in the peroxisomal degradation of docosahexaenoic acid. Homo sapiens (taxid: 9606) EC: 1 EC: . EC: 3 EC: . EC: 1 EC: . EC: 3 EC: 4 |
| >sp|Q6NV34|DECR2_DANRE Peroxisomal 2,4-dienoyl-CoA reductase OS=Danio rerio GN=decr2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 163 bits (412), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 102/246 (41%), Positives = 138/246 (56%), Gaps = 13/246 (5%)
Query: 5 FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL-GIPA 63
+ D+L +VA +TGGGSGIGF I+ L +HG I R + A L S G
Sbjct: 28 YSPDLLSDQVAFITGGGSGIGFRIAEVLMRHGCDTVIASRNLEKISQAAKKLTSTTGRRC 87
Query: 64 IGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVG 123
+ + DVR+ E + V+ T+ FG++DIL+N AAGNFL PA LS N F+TV+EID++G
Sbjct: 88 LPIAMDVRQPETILAAVDETLKTFGRVDILINNAAGNFLCPATSLSFNAFKTVMEIDTMG 147
Query: 124 TFIMCHEAL-KYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRS 182
TF K+ K GG I+NISATL Y Q+H +AKAA D++TR
Sbjct: 148 TFNTSKVIYDKWFK---------DHGGSIVNISATLGYRGQALQVHAGSAKAANDAMTRH 198
Query: 183 LALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSK-ATDYMAAYKFGEKWDIAMAAL 241
LA+EWG +RVN +APGPI T G +L + A + + G K ++A A L
Sbjct: 199 LAVEWGPS-GVRVNTVAPGPISGTEGYRRLGGSHAETAGAFHSIPLQRAGNKTEMAHAVL 257
Query: 242 YLASDA 247
+LAS A
Sbjct: 258 FLASRA 263
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Auxiliary enzyme of beta-oxidation. Participates in the degradation of unsaturated fatty enoyl-CoA esters having double bonds in both even- and odd-numbered positions in peroxisome. Catalyzes the NADP-dependent reduction of 2,4-dienoyl-CoA to yield trans-3-enoyl-CoA. Danio rerio (taxid: 7955) EC: 1 EC: . EC: 3 EC: . EC: 1 EC: . EC: 3 EC: 4 |
| >sp|Q9WV68|DECR2_MOUSE Peroxisomal 2,4-dienoyl-CoA reductase OS=Mus musculus GN=Decr2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 155 bits (393), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 104/243 (42%), Positives = 144/243 (59%), Gaps = 11/243 (4%)
Query: 5 FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR-KTVLRSAVAALHSLGIPA 63
F D+L+ KVA +TGGGSGIGF I+ +HG I+GR + V +A + + G
Sbjct: 21 FCPDLLQDKVAFITGGGSGIGFRIAEIFMRHGCHTVIVGRSLQKVTTAAKKLVAATGKRC 80
Query: 64 IGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVG 123
+ L DVR + + V+ + FGK++IL+N AAGNFL PA LS N F+TV++ID++G
Sbjct: 81 LPLSMDVRVPPEVMTAVDQALQEFGKINILINCAAGNFLCPASALSFNAFKTVVDIDTIG 140
Query: 124 TFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSL 183
TF + ++ Y KK R GG+I+NI+ATL Q+H AAKAAVD++TR L
Sbjct: 141 TFNV--SSVLY-KKFFRDH-----GGVIVNITATLSMRGQVLQLHAGAAKAAVDAMTRHL 192
Query: 184 ALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAY-KFGEKWDIAMAALY 242
A+EWG IRVN +APG I T G+ +L SK + + G K +IA + LY
Sbjct: 193 AVEWGPQ-NIRVNSLAPGAISGTEGLRRLRGSNASSKLKHFSNPIPRLGTKTEIAHSVLY 251
Query: 243 LAS 245
LAS
Sbjct: 252 LAS 254
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Auxiliary enzyme of beta-oxidation. Participates in the degradation of unsaturated fatty enoyl-CoA esters having double bonds in both even- and odd-numbered positions in peroxisome. Catalyzes the NADP-dependent reduction of 2,4-dienoyl-CoA to yield trans-3-enoyl-CoA. Has activity towards short and medium chain 2,4-dienoyl-CoAs, but also towards 2,4,7,10,13,16,19-docosaheptaenoyl-CoA, suggesting that it does not constitute a rate limiting step in the peroxisomal degradation of docosahexaenoic acid. Mus musculus (taxid: 10090) EC: 1 EC: . EC: 3 EC: . EC: 1 EC: . EC: 3 EC: 4 |
| >sp|Q9Z2M4|DECR2_RAT Peroxisomal 2,4-dienoyl-CoA reductase OS=Rattus norvegicus GN=Decr2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 149 bits (377), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 101/244 (41%), Positives = 141/244 (57%), Gaps = 13/244 (5%)
Query: 5 FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR-KTVLRSAVAALHSLGIPA 63
F D+L+ KVA +TGGGSGIGF I+ +HG I+ R V +A + + G
Sbjct: 21 FCPDLLQDKVAFITGGGSGIGFRIAEIFMRHGCHTVIVSRSLPRVSEAAKKLVAATGKRC 80
Query: 64 IGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVG 123
+ L DVR + V+ + FGK+DIL+N AAGNFL PA LS N F+TV++ID++G
Sbjct: 81 LPLSMDVRVPPAVMAAVDQALKEFGKIDILINCAAGNFLCPASALSFNAFKTVVDIDTLG 140
Query: 124 TFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSL 183
TF + + + GG+I+NI+ATL Q+H AAKAAVD++TR L
Sbjct: 141 TFNVSRVLYEKFFR--------DHGGVIVNITATLSMRGQVLQLHAGAAKAAVDAMTRHL 192
Query: 184 ALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAA--YKFGEKWDIAMAAL 241
A+EWG IRVN +APG I T G+ +L + SK Y+++ + G K +IA + L
Sbjct: 193 AVEWGPQ-NIRVNSLAPGAISGTEGLRRLGGPKASSK-FKYLSSPIPRLGTKTEIAHSVL 250
Query: 242 YLAS 245
YLAS
Sbjct: 251 YLAS 254
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Auxiliary enzyme of beta-oxidation. Participates in the degradation of unsaturated fatty enoyl-CoA esters having double bonds in both even- and odd-numbered positions in peroxisome. Catalyzes the NADP-dependent reduction of 2,4-dienoyl-CoA to yield trans-3-enoyl-CoA. Has activity towards short and medium chain 2,4-dienoyl-CoAs, but also towards 2,4,7,10,13,16,19-docosaheptaenoyl-CoA, suggesting that it does not constitute a rate limiting step in the peroxisomal degradation of docosahexaenoic acid. Rattus norvegicus (taxid: 10116) EC: 1 EC: . EC: 3 EC: . EC: 1 EC: . EC: 3 EC: 4 |
| >sp|O34717|FADH_BACSU Probable 2,4-dienoyl-CoA reductase OS=Bacillus subtilis (strain 168) GN=fadH PE=2 SV=1 | Back alignment and function description |
|---|
Score = 144 bits (364), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 85/238 (35%), Positives = 130/238 (54%), Gaps = 8/238 (3%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
++ K ++TGG SG+G ++ + + G + + GR L + + + D
Sbjct: 1 MEKKAVIITGGSSGMGKAMAKKQAELGWHVMVTGRNHEALEETKKEIQTFEGQVACFQMD 60
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
VR A +++ + FG+LD L+N AAGNF+ PAE L+PNG++ VIEI GTF C
Sbjct: 61 VRSDSAASDMIKEAVKAFGRLDALINNAAGNFICPAEKLTPNGWKAVIEIVLNGTFF-CS 119
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
+A R G+I+N++AT + A +H +AAKA V S+TR+LA+EWG+
Sbjct: 120 QA------AARHWIDQKQQGVILNMAATYAWGAGAGVVHSAAAKAGVLSLTRTLAVEWGS 173
Query: 190 DYAIRVNGIAPGPIKDTAGVSKL-APEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246
Y IR N IAPGPI+ T G KL E+ ++ + + + G +IA A +L SD
Sbjct: 174 KYGIRTNAIAPGPIERTGGAEKLFESEKAMARTMNSVPLGRLGTPEEIAALAAFLLSD 231
|
Auxiliary enzyme of beta-oxidation. It participates in the metabolism of unsaturated fatty enoyl-CoA esters having double bonds in both even- and odd-numbered positions. Catalyzes the NADP-dependent reduction of 2,4-dienoyl-CoA to yield trans-3-enoyl-CoA. Bacillus subtilis (strain 168) (taxid: 224308) EC: 1 EC: . EC: 3 EC: . EC: 1 EC: . EC: 3 EC: 4 |
| >sp|P32573|SPS19_YEAST Peroxisomal 2,4-dienoyl-CoA reductase SPS19 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SPS19 PE=1 SV=4 | Back alignment and function description |
|---|
Score = 141 bits (355), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 92/251 (36%), Positives = 134/251 (53%), Gaps = 16/251 (6%)
Query: 2 ESPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG- 60
E ++ D+ KGKVA +TGG I + L G AI+GR + A + L
Sbjct: 14 EGSWRPDLFKGKVAFVTGGAGTICRVQTEALVLLGCKAAIVGRDQERTEQAAKGISQLAK 73
Query: 61 ----IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTV 116
+ AI DVR E V+ T+ FGK+D ++ AAGNF+ +LSPN F++V
Sbjct: 74 DKDAVLAIA-NVDVRNFEQVENAVKKTVEKFGKIDFVIAGAAGNFVCDFANLSPNAFKSV 132
Query: 117 IEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAV 176
++ID +G+F LK LKK S G I+ +SAT HY +Q HV AAKA +
Sbjct: 133 VDIDLLGSFNTAKACLKELKK---------SKGSILFVSATFHYYGVPFQGHVGAAKAGI 183
Query: 177 DSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDI 236
D++ ++LA+E G IR N IAPG I +T G+ +LA ++ + KA + + G DI
Sbjct: 184 DALAKNLAVELGP-LGIRSNCIAPGAIDNTEGLKRLAGKKYKEKALAKIPLQRLGSTRDI 242
Query: 237 AMAALYLASDA 247
A + +Y+ S A
Sbjct: 243 AESTVYIFSPA 253
|
Auxiliary enzyme of beta-oxidation. Participates in the degradation of unsaturated fatty enoyl-CoA esters having double bonds in both even- and odd-numbered positions in peroxisome. Catalyzes the NADP-dependent reduction of 2,4-dienoyl-CoA to yield trans-3-enoyl-CoA. Dispensable for growth and sporulation on solid acetate and oleate media, but is essential for these processes to occur on petroselineate. Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) EC: 1 EC: . EC: 3 EC: . EC: 1 EC: . EC: 3 EC: 4 |
| >sp|Q9WYG0|Y325_THEMA Uncharacterized oxidoreductase TM_0325 OS=Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) GN=TM_0325 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 120 bits (300), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/244 (33%), Positives = 132/244 (54%), Gaps = 21/244 (8%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
+GKV L+TG GSGIG + ++ + GA +AI + + V + S+G A + GD
Sbjct: 3 FQGKVVLITGAGSGIGKKAAVMFAERGAKVAINDISEEKGKETVELIKSMGGEAAFIFGD 62
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVP---AEDLSPNGFRTVIEIDSVGTFI 126
V K DA ++V+ T+ FG+LDILVN A +VP E+ S F + ++ G F+
Sbjct: 63 VAK--DAEQIVKKTVETFGRLDILVNNAG---IVPYGNIEETSEEDFDKTMAVNVKGPFL 117
Query: 127 MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALE 186
+ A++ +KK G GG+I+N+S+ + S +KAA+ +TRSLA++
Sbjct: 118 LSKYAVEQMKKQG--------GGVIVNVSSEAGLIGIPRRCVYSVSKAALLGLTRSLAVD 169
Query: 187 WGTDYAIRVNGIAPGPIKDTAGVSKLA----PEEIRSKATDYMAAYKFGEKWDIAMAALY 242
+ DY IRVN + PG + ++++ PEE+ K T + + G++ +IA A L+
Sbjct: 170 Y-VDYGIRVNAVCPGTTQSEGLMARVKASPNPEELLKKMTSRIPMKRLGKEEEIAFAILF 228
Query: 243 LASD 246
A D
Sbjct: 229 AACD 232
|
Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) (taxid: 243274) EC: 1 EC: . EC: - EC: . EC: - EC: . EC: - |
| >sp|Q9CQ62|DECR_MOUSE 2,4-dienoyl-CoA reductase, mitochondrial OS=Mus musculus GN=Decr1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 116 bits (290), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/241 (32%), Positives = 122/241 (50%), Gaps = 10/241 (4%)
Query: 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHS-LGIPAIGL 66
D +GKVA +TGGG+G+G ++ L GA I R VL++ + S G +
Sbjct: 55 DAFQGKVAFITGGGTGLGKAMTTFLSTLGAQCVIASRNIDVLKATAEEISSKTGNKVHAI 114
Query: 67 EGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFI 126
DVR + V I G D+++N AAGNF+ P+E L+PNG++T+ +I GT
Sbjct: 115 RCDVRDPDMVHNTVLELIKVAGHPDVVINNAAGNFISPSERLTPNGWKTITDIVLNGTAY 174
Query: 127 MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALE 186
+ E K L K +G A + I+ + + + + S+AK+ V+++ +SLA E
Sbjct: 175 VTLEIGKQLIKAQKGAA-------FLAITTIYAESGSGFVMPSSSAKSGVEAMNKSLAAE 227
Query: 187 WGTDYAIRVNGIAPGPIKDTAGVSKLAPE-EIRSKATDYMAAYKFGEKWDIAMAALYLAS 245
WG Y +R N I PGPIK S+L P + D + + G ++A A +L S
Sbjct: 228 WGR-YGMRFNIIQPGPIKTKGAFSRLDPTGRFEKEMIDRIPCGRLGTMEELANLATFLCS 286
Query: 246 D 246
D
Sbjct: 287 D 287
|
Auxiliary enzyme of beta-oxidation. It participates in the metabolism of unsaturated fatty enoyl-CoA esters having double bonds in both even- and odd-numbered positions. Catalyzes the NADP-dependent reduction of 2,4-dienoyl-CoA to yield trans-3-enoyl-CoA. Mus musculus (taxid: 10090) EC: 1 EC: . EC: 3 EC: . EC: 1 EC: . EC: 3 EC: 4 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 249 | ||||||
| 255565323 | 298 | 2,4-dienoyl-CoA reductase, putative [Ric | 1.0 | 0.835 | 0.827 | 1e-116 | |
| 225423652 | 297 | PREDICTED: peroxisomal 2,4-dienoyl-CoA r | 0.995 | 0.835 | 0.831 | 1e-116 | |
| 224120278 | 299 | predicted protein [Populus trichocarpa] | 1.0 | 0.832 | 0.815 | 1e-112 | |
| 225462240 | 297 | PREDICTED: peroxisomal 2,4-dienoyl-CoA r | 0.995 | 0.835 | 0.811 | 1e-111 | |
| 388502636 | 297 | unknown [Lotus japonicus] | 0.995 | 0.835 | 0.787 | 1e-109 | |
| 388519645 | 275 | unknown [Lotus japonicus] | 0.995 | 0.901 | 0.787 | 1e-108 | |
| 358249176 | 298 | uncharacterized protein LOC100800885 [Gl | 1.0 | 0.835 | 0.803 | 1e-108 | |
| 358248016 | 298 | uncharacterized protein LOC100793630 [Gl | 1.0 | 0.835 | 0.799 | 1e-106 | |
| 449444144 | 297 | PREDICTED: peroxisomal 2,4-dienoyl-CoA r | 0.995 | 0.835 | 0.775 | 1e-105 | |
| 297834090 | 298 | short-chain dehydrogenase/reductase fami | 1.0 | 0.835 | 0.771 | 1e-102 |
| >gi|255565323|ref|XP_002523653.1| 2,4-dienoyl-CoA reductase, putative [Ricinus communis] gi|223537105|gb|EEF38739.1| 2,4-dienoyl-CoA reductase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 423 bits (1088), Expect = e-116, Method: Compositional matrix adjust.
Identities = 206/249 (82%), Positives = 229/249 (91%)
Query: 1 MESPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG 60
MESPFKGDILKGKVAL+TGGGSGIG+EISLQLGKHGA+IAIMGRRK VL SAVA+LHSLG
Sbjct: 1 MESPFKGDILKGKVALITGGGSGIGYEISLQLGKHGASIAIMGRRKNVLLSAVASLHSLG 60
Query: 61 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID 120
IPAIGLEGDVRK++DAV+++EST+ HFG+LDILVNAAAGNFLV +EDLSPNGFRTVI+ID
Sbjct: 61 IPAIGLEGDVRKKDDAVKILESTVRHFGRLDILVNAAAGNFLVASEDLSPNGFRTVIDID 120
Query: 121 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSIT 180
SVGTF MCHEA KYLKKGG+G+ S+ GGIIINISATLHYTATWYQIHVSAAKAAVDSIT
Sbjct: 121 SVGTFTMCHEAFKYLKKGGQGKDPSTGGGIIINISATLHYTATWYQIHVSAAKAAVDSIT 180
Query: 181 RSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAA 240
RSLALEWGT+Y I+VNGIAPGPI DTAG+SKLAPEEI +A + + K GEKWDIAMAA
Sbjct: 181 RSLALEWGTEYDIKVNGIAPGPIGDTAGLSKLAPEEILREAKEKLPLDKLGEKWDIAMAA 240
Query: 241 LYLASDAGQ 249
LYL SDAG+
Sbjct: 241 LYLTSDAGK 249
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225423652|ref|XP_002275982.1| PREDICTED: peroxisomal 2,4-dienoyl-CoA reductase [Vitis vinifera] gi|147772171|emb|CAN73418.1| hypothetical protein VITISV_019955 [Vitis vinifera] gi|297737992|emb|CBI27193.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 423 bits (1087), Expect = e-116, Method: Compositional matrix adjust.
Identities = 207/249 (83%), Positives = 231/249 (92%), Gaps = 1/249 (0%)
Query: 1 MESPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG 60
MESPF+GDILKGKVALLTGGGSGIG+EIS QLGKHGA+IAIMGRR+ VL +AV++LHSLG
Sbjct: 1 MESPFRGDILKGKVALLTGGGSGIGYEISRQLGKHGASIAIMGRRRQVLDAAVSSLHSLG 60
Query: 61 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID 120
IPAIGLEGDVRK+EDAVRV+ESTI HFG+LDILVNAAAGNFLVPAEDLSP GF+TVI+ID
Sbjct: 61 IPAIGLEGDVRKQEDAVRVLESTIKHFGRLDILVNAAAGNFLVPAEDLSPKGFQTVIDID 120
Query: 121 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSIT 180
SVGTF MCHEAL+YLKKGG G+ S S+GGIIINISATLHYTATWYQIHVSAAKAAVDSIT
Sbjct: 121 SVGTFTMCHEALQYLKKGGPGK-SPSTGGIIINISATLHYTATWYQIHVSAAKAAVDSIT 179
Query: 181 RSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAA 240
RSLALEWGTDY IRVNGIAPGPI DTAG+SKLAPE++ KA ++ +K GEKWDIAMAA
Sbjct: 180 RSLALEWGTDYDIRVNGIAPGPIDDTAGLSKLAPEDVVRKAKEHEPLFKLGEKWDIAMAA 239
Query: 241 LYLASDAGQ 249
+YLAS+AG+
Sbjct: 240 VYLASNAGK 248
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224120278|ref|XP_002318290.1| predicted protein [Populus trichocarpa] gi|222858963|gb|EEE96510.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 203/249 (81%), Positives = 226/249 (90%)
Query: 1 MESPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG 60
+ESPFK +IL+GKVALLTGGGSGIG+EISLQLGKHGA+IAIMGRRK V+ SAV++L+SLG
Sbjct: 2 VESPFKPEILRGKVALLTGGGSGIGYEISLQLGKHGASIAIMGRRKHVVDSAVSSLNSLG 61
Query: 61 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID 120
IPAIG EGDVRKREDA+RVVEST HFG+LDILVNAAAGNFLVP+EDLS NGFRTV++ID
Sbjct: 62 IPAIGFEGDVRKREDAIRVVESTFKHFGRLDILVNAAAGNFLVPSEDLSSNGFRTVMDID 121
Query: 121 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSIT 180
SVGTF MCHEALKYLKKGG G+ S++GG IINISATLHYTATWYQIHVSAAKAAVDSIT
Sbjct: 122 SVGTFTMCHEALKYLKKGGLGKDPSTAGGTIINISATLHYTATWYQIHVSAAKAAVDSIT 181
Query: 181 RSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAA 240
R+LALEWGTDY IRVNGIAPGPI DTAG+SKL E I SKA + M +K GEKWDIAMAA
Sbjct: 182 RNLALEWGTDYDIRVNGIAPGPIGDTAGMSKLGLEGILSKAMEKMPLFKVGEKWDIAMAA 241
Query: 241 LYLASDAGQ 249
+YLASDAG+
Sbjct: 242 VYLASDAGK 250
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225462240|ref|XP_002262755.1| PREDICTED: peroxisomal 2,4-dienoyl-CoA reductase [Vitis vinifera] gi|297736138|emb|CBI24176.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 406 bits (1044), Expect = e-111, Method: Compositional matrix adjust.
Identities = 202/249 (81%), Positives = 220/249 (88%), Gaps = 1/249 (0%)
Query: 1 MESPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG 60
MESPFK D+LKGKVALLTGGGSGIGFEIS Q G HGA+IAIMGRRK VL SAV+ L S G
Sbjct: 1 MESPFKADVLKGKVALLTGGGSGIGFEISTQFGLHGASIAIMGRRKQVLDSAVSGLCSQG 60
Query: 61 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID 120
IPA+G GDVRK+EDA RVVEST+ HFG+LDILVNAAAGNFLV +EDLSPNGFRTV++ID
Sbjct: 61 IPAVGFVGDVRKQEDAKRVVESTVKHFGRLDILVNAAAGNFLVSSEDLSPNGFRTVMDID 120
Query: 121 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSIT 180
SVGTF MCHEALKYLKKGG G+ S SSGG I+NISATLHYTA WYQIHVSAAKAAVD+ T
Sbjct: 121 SVGTFTMCHEALKYLKKGGPGR-SFSSGGSILNISATLHYTAAWYQIHVSAAKAAVDATT 179
Query: 181 RSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAA 240
R+LALEWGTDY IRVNGIAPGPI DTAG+SKLAPEEI +KA + M YK GEKWDIAMAA
Sbjct: 180 RNLALEWGTDYDIRVNGIAPGPIGDTAGMSKLAPEEISNKAREIMPLYKLGEKWDIAMAA 239
Query: 241 LYLASDAGQ 249
LYLASDAG+
Sbjct: 240 LYLASDAGK 248
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|388502636|gb|AFK39384.1| unknown [Lotus japonicus] | Back alignment and taxonomy information |
|---|
Score = 399 bits (1024), Expect = e-109, Method: Compositional matrix adjust.
Identities = 196/249 (78%), Positives = 217/249 (87%), Gaps = 1/249 (0%)
Query: 1 MESPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG 60
MESPFKG+ILKGKVAL+TGG SGIGFEIS Q GKHGA++A+MGRRK VL SAV+ L SL
Sbjct: 1 MESPFKGNILKGKVALITGGASGIGFEISTQFGKHGASVALMGRRKQVLDSAVSVLQSLS 60
Query: 61 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID 120
IPAIG GDVRK+EDA RVVEST HFGK+DILVNAAAGNFLV AEDLSPNGFRTV++ID
Sbjct: 61 IPAIGFVGDVRKQEDAARVVESTFKHFGKIDILVNAAAGNFLVSAEDLSPNGFRTVLDID 120
Query: 121 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSIT 180
SVGTF MC EALKYLKKGG G+ SS +G IINISATLHYTA+WYQIHVSAAKAAVD+ T
Sbjct: 121 SVGTFTMCSEALKYLKKGGLGRGSSGAGA-IINISATLHYTASWYQIHVSAAKAAVDATT 179
Query: 181 RSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAA 240
R+LALEWGTDY IRVNGIAPGPI T G+SKLAP+EI +K+ DYM YK GEKWDIAMAA
Sbjct: 180 RNLALEWGTDYDIRVNGIAPGPISGTPGMSKLAPDEINNKSKDYMPLYKEGEKWDIAMAA 239
Query: 241 LYLASDAGQ 249
L+L SDAG+
Sbjct: 240 LFLVSDAGK 248
|
Source: Lotus japonicus Species: Lotus japonicus Genus: Lotus Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|388519645|gb|AFK47884.1| unknown [Lotus japonicus] | Back alignment and taxonomy information |
|---|
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 196/249 (78%), Positives = 217/249 (87%), Gaps = 1/249 (0%)
Query: 1 MESPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG 60
MESPFKG+ILKGKVAL+TGG SGIGFEIS Q GKHGA++A+MGRRK VL SAV+ L SL
Sbjct: 1 MESPFKGNILKGKVALITGGASGIGFEISTQFGKHGASVALMGRRKQVLDSAVSVLQSLS 60
Query: 61 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID 120
IPAIG GDVRK+EDA RVVEST HFGK+DILVNAAAGNFLV AEDLSPNGFRTV++ID
Sbjct: 61 IPAIGFVGDVRKQEDAARVVESTFKHFGKIDILVNAAAGNFLVSAEDLSPNGFRTVLDID 120
Query: 121 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSIT 180
SVGTF MC EALKYLKKGG G+ SS +G IINISATLHYTA+WYQIHVSAAKAAVD+ T
Sbjct: 121 SVGTFTMCSEALKYLKKGGLGRGSSGAGA-IINISATLHYTASWYQIHVSAAKAAVDATT 179
Query: 181 RSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAA 240
R+LALEWGTDY IRVNGIAPGPI T G+SKLAP+EI +K+ DYM YK GEKWDIAMAA
Sbjct: 180 RNLALEWGTDYDIRVNGIAPGPISGTPGMSKLAPDEINNKSKDYMPLYKGGEKWDIAMAA 239
Query: 241 LYLASDAGQ 249
L+L SDAG+
Sbjct: 240 LFLVSDAGK 248
|
Source: Lotus japonicus Species: Lotus japonicus Genus: Lotus Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|358249176|ref|NP_001240261.1| uncharacterized protein LOC100800885 [Glycine max] gi|255644975|gb|ACU22987.1| unknown [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 200/249 (80%), Positives = 224/249 (89%)
Query: 1 MESPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG 60
MESPF+ +ILKGKVAL+TGG SGIGFEIS Q GKHGA++A+MGRRK VL+SAV+ L SL
Sbjct: 1 MESPFRPEILKGKVALITGGASGIGFEISTQFGKHGASVALMGRRKQVLQSAVSVLQSLA 60
Query: 61 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID 120
IPA+G EGDVRK+EDAVRVVEST HFG++DILVNAAAGNFLV AEDLSPNGFRTV++ID
Sbjct: 61 IPAVGFEGDVRKQEDAVRVVESTFKHFGRIDILVNAAAGNFLVSAEDLSPNGFRTVLDID 120
Query: 121 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSIT 180
SVGTF MCHEALKYLKKGG G+++SSSGG IINISATLHYTA+WYQIHVSAAKAAVD+ T
Sbjct: 121 SVGTFTMCHEALKYLKKGGEGRSNSSSGGSIINISATLHYTASWYQIHVSAAKAAVDATT 180
Query: 181 RSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAA 240
R+LALEWGTDY IRVNGIAPGPI DT G+SKLAP+EI SKA DYM YK GEKWDIAMAA
Sbjct: 181 RNLALEWGTDYDIRVNGIAPGPISDTPGMSKLAPDEISSKARDYMPLYKLGEKWDIAMAA 240
Query: 241 LYLASDAGQ 249
L+L SDAG+
Sbjct: 241 LFLVSDAGK 249
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|358248016|ref|NP_001239792.1| uncharacterized protein LOC100793630 [Glycine max] gi|255647355|gb|ACU24144.1| unknown [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust.
Identities = 199/249 (79%), Positives = 222/249 (89%)
Query: 1 MESPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG 60
MESPFK +ILKGKVAL+TGG SGIGFEIS Q GKHGA++A+MGRRK VL+SAV+ L SL
Sbjct: 1 MESPFKPEILKGKVALITGGASGIGFEISTQFGKHGASVALMGRRKQVLQSAVSVLQSLV 60
Query: 61 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID 120
IPA+G EGDVRK+EDA RVVEST HFG++DILVNAAAGNFLV AEDLS NGFRTV++ID
Sbjct: 61 IPAVGFEGDVRKQEDAARVVESTFKHFGRIDILVNAAAGNFLVSAEDLSSNGFRTVLDID 120
Query: 121 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSIT 180
SVGTF MCHEALKYLKKGG G+++SSSGG IINISATLHYTA+WYQIHVSAAKAAVD+ T
Sbjct: 121 SVGTFTMCHEALKYLKKGGEGRSNSSSGGSIINISATLHYTASWYQIHVSAAKAAVDATT 180
Query: 181 RSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAA 240
R+LALEWGTDY IRVNGIAPGPI T G+SKLAP+EI SKA DYM YK GEKWDIAMAA
Sbjct: 181 RNLALEWGTDYDIRVNGIAPGPISGTPGMSKLAPDEISSKARDYMPLYKLGEKWDIAMAA 240
Query: 241 LYLASDAGQ 249
L+LASDAG+
Sbjct: 241 LFLASDAGK 249
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449444144|ref|XP_004139835.1| PREDICTED: peroxisomal 2,4-dienoyl-CoA reductase-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 193/249 (77%), Positives = 215/249 (86%), Gaps = 1/249 (0%)
Query: 1 MESPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG 60
M SPF+ DIL+GKVAL+TGGGSGIGFEI+ Q G+HGA+IAIMGRRK VL SAVAAL SLG
Sbjct: 1 MASPFRSDILRGKVALITGGGSGIGFEIATQFGQHGASIAIMGRRKQVLDSAVAALRSLG 60
Query: 61 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID 120
I A G EGDVRK+EDA VV+ST N G LDILVNAAAGNFLV AEDLSPNGFRTV++ID
Sbjct: 61 ISAFGFEGDVRKQEDASSVVDSTFNKLGSLDILVNAAAGNFLVSAEDLSPNGFRTVMDID 120
Query: 121 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSIT 180
SVGTF MCH+ALKYLKKGG G+ +S +GG IINISATLHYTA WYQIHVSAAKAAVD+IT
Sbjct: 121 SVGTFTMCHQALKYLKKGGPGR-NSLTGGTIINISATLHYTAAWYQIHVSAAKAAVDAIT 179
Query: 181 RSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAA 240
R+LALEWG D+ IRVNGIAPGPI+ T G+SKLAPEEI SK + M Y+ GEKWDIAMAA
Sbjct: 180 RNLALEWGADHDIRVNGIAPGPIQGTPGLSKLAPEEINSKIREDMPLYRIGEKWDIAMAA 239
Query: 241 LYLASDAGQ 249
LYLASDAG+
Sbjct: 240 LYLASDAGK 248
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297834090|ref|XP_002884927.1| short-chain dehydrogenase/reductase family protein [Arabidopsis lyrata subsp. lyrata] gi|297330767|gb|EFH61186.1| short-chain dehydrogenase/reductase family protein [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 192/249 (77%), Positives = 217/249 (87%)
Query: 1 MESPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG 60
MESPFK D+++G+VAL+TGGGSGIGFEIS Q GKHGA+IAIMGRRK VL AV+AL SLG
Sbjct: 1 MESPFKPDVVRGQVALITGGGSGIGFEISSQFGKHGASIAIMGRRKQVLDDAVSALRSLG 60
Query: 61 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID 120
I AIGLEGDVRK+EDA RVVE+T HFG++DILVNAAAGNFL AEDLSPNGFRTV++ID
Sbjct: 61 IQAIGLEGDVRKQEDARRVVEATYQHFGRIDILVNAAAGNFLAAAEDLSPNGFRTVLDID 120
Query: 121 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSIT 180
+VGTF MCH ALKYLKKGG G+ SS+ GG IINISATLHYTA+WYQIHVSAAKAAVD+ T
Sbjct: 121 AVGTFNMCHAALKYLKKGGPGRDSSTGGGSIINISATLHYTASWYQIHVSAAKAAVDATT 180
Query: 181 RSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAA 240
R+LALEWGTDY IRVNGIAPGPI T G+SKL PEEI +K +YM YK GEKWDIAMAA
Sbjct: 181 RNLALEWGTDYDIRVNGIAPGPIGGTPGMSKLVPEEIENKTREYMPLYKLGEKWDIAMAA 240
Query: 241 LYLASDAGQ 249
LYL+ D+G+
Sbjct: 241 LYLSCDSGK 249
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 249 | ||||||
| TAIR|locus:2087770 | 298 | SDRB "short-chain dehydrogenas | 1.0 | 0.835 | 0.726 | 9e-93 | |
| UNIPROTKB|F1NG68 | 308 | LOC100858408 "Uncharacterized | 0.927 | 0.75 | 0.418 | 4.8e-39 | |
| TAIR|locus:3437247 | 156 | AT2G07640 [Arabidopsis thalian | 0.493 | 0.788 | 0.642 | 3e-37 | |
| MGI|MGI:1347059 | 292 | Decr2 "2-4-dienoyl-Coenzyme A | 0.931 | 0.794 | 0.399 | 4.4e-36 | |
| ZFIN|ZDB-GENE-040426-2612 | 300 | decr2 "2,4-dienoyl CoA reducta | 0.939 | 0.78 | 0.383 | 5.1e-35 | |
| TIGR_CMR|BA_4204 | 254 | BA_4204 "oxidoreductase, short | 0.915 | 0.897 | 0.391 | 8.3e-35 | |
| RGD|71002 | 292 | Decr2 "2,4-dienoyl CoA reducta | 0.927 | 0.791 | 0.401 | 8.3e-35 | |
| UNIPROTKB|Q5RBV3 | 292 | DECR2 "Peroxisomal 2,4-dienoyl | 0.931 | 0.794 | 0.403 | 1.1e-34 | |
| UNIPROTKB|F1PEZ3 | 266 | DECR2 "Uncharacterized protein | 0.907 | 0.849 | 0.405 | 1.7e-34 | |
| UNIPROTKB|Q9NUI1 | 292 | DECR2 "Peroxisomal 2,4-dienoyl | 0.931 | 0.794 | 0.399 | 1.7e-34 |
| TAIR|locus:2087770 SDRB "short-chain dehydrogenase-reductase B" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 924 (330.3 bits), Expect = 9.0e-93, P = 9.0e-93
Identities = 181/249 (72%), Positives = 203/249 (81%)
Query: 1 MESPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG 60
M+SPFK D+++G+VAL+TGGGSGIGFEIS Q GKHGA+IAIMGRRK VL AV+AL SLG
Sbjct: 1 MDSPFKPDVVRGQVALITGGGSGIGFEISSQFGKHGASIAIMGRRKQVLDDAVSALRSLG 60
Query: 61 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID 120
I AIGLEGDVRK+EDA RVVE+T HFGKLDILVNAAAGNFL AEDLSPNGFRTV++ID
Sbjct: 61 IQAIGLEGDVRKQEDARRVVEATFQHFGKLDILVNAAAGNFLAAAEDLSPNGFRTVLDID 120
Query: 121 SVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSIT 180
+VGTF MCH ALKYLKK ATLHYTA+WYQIHVSAAKAAVD+ T
Sbjct: 121 AVGTFNMCHAALKYLKKGAPGRDSSSGGGSIINISATLHYTASWYQIHVSAAKAAVDATT 180
Query: 181 RSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAA 240
R+LALEWGTDY IRVNGIAPGPI T G+SKL PEEI +K +YM YK GEKWDIAMAA
Sbjct: 181 RNLALEWGTDYDIRVNGIAPGPIGGTPGMSKLVPEEIENKTREYMPLYKVGEKWDIAMAA 240
Query: 241 LYLASDAGQ 249
LYL+ D+G+
Sbjct: 241 LYLSCDSGK 249
|
|
| UNIPROTKB|F1NG68 LOC100858408 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 417 (151.9 bits), Expect = 4.8e-39, P = 4.8e-39
Identities = 102/244 (41%), Positives = 142/244 (58%)
Query: 5 FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGR-RKTVLRSAVAALHSLGIPA 63
F DIL G+VA +TGGGSGIGF I+ +HG AI GR ++ V++++ + + G
Sbjct: 35 FSPDILAGRVAFITGGGSGIGFRIAEIFMRHGCRTAIAGRNQQRVVQASKKLVVATGQQC 94
Query: 64 IGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVG 123
+ L DVR+ + V V+ T+ F ++DILVN AAGNFL PA LS N F+TV++ID++G
Sbjct: 95 LPLSIDVRQPQTIVAAVDETLKQFKQIDILVNGAAGNFLCPASALSFNAFKTVMDIDTLG 154
Query: 124 TFIMCHEAL-KYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRS 182
TF KY + ATL Y Q+H +AKAA+D++TR
Sbjct: 155 TFNTSKVLFEKYFRDHGGVIINIT---------ATLSYRGQALQVHAGSAKAAIDAMTRH 205
Query: 183 LALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIR-SKATDYMAAYKFGEKWDIAMAAL 241
LA+EWG + IRVN +APGPI T G +L + + SK D + + G K +IA +AL
Sbjct: 206 LAVEWGPNN-IRVNSLAPGPITGTEGFRRLGGKFAKDSKQFDTIPLQRAGNKTEIAHSAL 264
Query: 242 YLAS 245
YLAS
Sbjct: 265 YLAS 268
|
|
| TAIR|locus:3437247 AT2G07640 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 400 (145.9 bits), Expect = 3.0e-37, P = 3.0e-37
Identities = 79/123 (64%), Positives = 88/123 (71%)
Query: 127 MCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLALE 186
MCH ALKYLKK ATLHYTA+ YQIHVSAAK AVD+ TR+LALE
Sbjct: 1 MCHAALKYLKKVAPGRDSSSGGGSIINISATLHYTASRYQIHVSAAKVAVDATTRNLALE 60
Query: 187 WGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246
WGTDY IRVNGIA GPI T G+SKL PEEI +K +YM YK GEKWDIAMAALYL+ D
Sbjct: 61 WGTDYDIRVNGIATGPIGGTPGMSKLVPEEIENKTREYMPLYKLGEKWDIAMAALYLSCD 120
Query: 247 AGQ 249
+G+
Sbjct: 121 SGK 123
|
|
| MGI|MGI:1347059 Decr2 "2-4-dienoyl-Coenzyme A reductase 2, peroxisomal" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 389 (142.0 bits), Expect = 4.4e-36, P = 4.4e-36
Identities = 97/243 (39%), Positives = 134/243 (55%)
Query: 5 FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR-KTVLRSAVAALHSLGIPA 63
F D+L+ KVA +TGGGSGIGF I+ +HG I+GR + V +A + + G
Sbjct: 21 FCPDLLQDKVAFITGGGSGIGFRIAEIFMRHGCHTVIVGRSLQKVTTAAKKLVAATGKRC 80
Query: 64 IGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVG 123
+ L DVR + + V+ + FGK++IL+N AAGNFL PA LS N F+TV++ID++G
Sbjct: 81 LPLSMDVRVPPEVMTAVDQALQEFGKINILINCAAGNFLCPASALSFNAFKTVVDIDTIG 140
Query: 124 TFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSL 183
TF + ++ Y K ATL Q+H AAKAAVD++TR L
Sbjct: 141 TFNV--SSVLYKK------FFRDHGGVIVNITATLSMRGQVLQLHAGAAKAAVDAMTRHL 192
Query: 184 ALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAY-KFGEKWDIAMAALY 242
A+EWG IRVN +APG I T G+ +L SK + + G K +IA + LY
Sbjct: 193 AVEWGPQN-IRVNSLAPGAISGTEGLRRLRGSNASSKLKHFSNPIPRLGTKTEIAHSVLY 251
Query: 243 LAS 245
LAS
Sbjct: 252 LAS 254
|
|
| ZFIN|ZDB-GENE-040426-2612 decr2 "2,4-dienoyl CoA reductase 2, peroxisomal" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 379 (138.5 bits), Expect = 5.1e-35, P = 5.1e-35
Identities = 94/245 (38%), Positives = 129/245 (52%)
Query: 5 FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL-GIPA 63
+ D+L +VA +TGGGSGIGF I+ L +HG I R + A L S G
Sbjct: 28 YSPDLLSDQVAFITGGGSGIGFRIAEVLMRHGCDTVIASRNLEKISQAAKKLTSTTGRRC 87
Query: 64 IGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVG 123
+ + DVR+ E + V+ T+ FG++DIL+N AAGNFL PA LS N F+TV+EID++G
Sbjct: 88 LPIAMDVRQPETILAAVDETLKTFGRVDILINNAAGNFLCPATSLSFNAFKTVMEIDTMG 147
Query: 124 TFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSL 183
TF K ATL Y Q+H +AKAA D++TR L
Sbjct: 148 TF--------NTSKVIYDKWFKDHGGSIVNISATLGYRGQALQVHAGSAKAANDAMTRHL 199
Query: 184 ALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDY-MAAYKFGEKWDIAMAALY 242
A+EWG +RVN +APGPI T G +L + + + + G K ++A A L+
Sbjct: 200 AVEWGPS-GVRVNTVAPGPISGTEGYRRLGGSHAETAGAFHSIPLQRAGNKTEMAHAVLF 258
Query: 243 LASDA 247
LAS A
Sbjct: 259 LASRA 263
|
|
| TIGR_CMR|BA_4204 BA_4204 "oxidoreductase, short chain dehydrogenase/reductase family" [Bacillus anthracis str. Ames (taxid:198094)] | Back alignment and assigned GO terms |
|---|
Score = 377 (137.8 bits), Expect = 8.3e-35, P = 8.3e-35
Identities = 94/240 (39%), Positives = 133/240 (55%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
+K KV ++TGG SG+G ++ + K GA + I GR K L A + + ++ D
Sbjct: 1 MKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMD 60
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
VR +D +++E FG++DIL+N AAGNF+ PAEDLS NG+ +VI I GTF C
Sbjct: 61 VRNTDDIQKMIEQIDEKFGRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFY-CS 119
Query: 130 EAL-KY-LKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLALEW 187
+A+ KY ++K AT + A IH +AAKA V ++T++LA+EW
Sbjct: 120 QAIGKYWIEKGIKGNIINMV--------ATYAWDAGPGVIHSAAAKAGVLAMTKTLAVEW 171
Query: 188 GTDYAIRVNGIAPGPIKDTAGVSKL-APEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246
G Y IRVN IAPGPI+ T G KL EE+ + + + G +IA A YL SD
Sbjct: 172 GRKYGIRVNAIAPGPIERTGGADKLWISEEMAKRTIQSVPLGRLGTPEEIAGLAYYLCSD 231
|
|
| RGD|71002 Decr2 "2,4-dienoyl CoA reductase 2, peroxisomal" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 377 (137.8 bits), Expect = 8.3e-35, P = 8.3e-35
Identities = 98/244 (40%), Positives = 134/244 (54%)
Query: 5 FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR-KTVLRSAVAALHSLGIPA 63
F D+L+ KVA +TGGGSGIGF I+ +HG I+ R V +A + + G
Sbjct: 21 FCPDLLQDKVAFITGGGSGIGFRIAEIFMRHGCHTVIVSRSLPRVSEAAKKLVAATGKRC 80
Query: 64 IGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVG 123
+ L DVR + V+ + FGK+DIL+N AAGNFL PA LS N F+TV++ID++G
Sbjct: 81 LPLSMDVRVPPAVMAAVDQALKEFGKIDILINCAAGNFLCPASALSFNAFKTVVDIDTLG 140
Query: 124 TFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSL 183
TF + + Y K ATL Q+H AAKAAVD++TR L
Sbjct: 141 TFNVSR--VLYEK------FFRDHGGVIVNITATLSMRGQVLQLHAGAAKAAVDAMTRHL 192
Query: 184 ALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAY--KFGEKWDIAMAAL 241
A+EWG IRVN +APG I T G+ +L + SK Y+++ + G K +IA + L
Sbjct: 193 AVEWGPQN-IRVNSLAPGAISGTEGLRRLGGPKASSKFK-YLSSPIPRLGTKTEIAHSVL 250
Query: 242 YLAS 245
YLAS
Sbjct: 251 YLAS 254
|
|
| UNIPROTKB|Q5RBV3 DECR2 "Peroxisomal 2,4-dienoyl-CoA reductase" [Pongo abelii (taxid:9601)] | Back alignment and assigned GO terms |
|---|
Score = 376 (137.4 bits), Expect = 1.1e-34, P = 1.1e-34
Identities = 98/243 (40%), Positives = 129/243 (53%)
Query: 5 FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR-KTVLRSAVAALHSLGIPA 63
F D+L+ KVA +TGGGSGIGF I+ +HG I R VL +A + G
Sbjct: 21 FCPDLLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRC 80
Query: 64 IGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVG 123
+ L DVR V V+ + FG++DIL+N AAGNFL PA LS N F+TV++ID+ G
Sbjct: 81 LPLSMDVRAPPAIVAAVDQALKEFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSG 140
Query: 124 TFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSL 183
TF + + Y K ATL Q+H +AKAAVD++TR L
Sbjct: 141 TFNVSR--VLYEK------FFRDHGGVIVNITATLGNRGQALQVHAGSAKAAVDAMTRHL 192
Query: 184 ALEWGTDYAIRVNGIAPGPIKDTAGVSKLA-PEEIRSKATDYMAAYKFGEKWDIAMAALY 242
A+EWG IRVN +APGPI T G+ +L P+ S + G K +IA + LY
Sbjct: 193 AVEWGPQN-IRVNSLAPGPISGTEGLRRLGGPQASLSTKVTASPLQRLGNKTEIAHSVLY 251
Query: 243 LAS 245
LAS
Sbjct: 252 LAS 254
|
|
| UNIPROTKB|F1PEZ3 DECR2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 374 (136.7 bits), Expect = 1.7e-34, P = 1.7e-34
Identities = 97/239 (40%), Positives = 128/239 (53%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR-KTVLRSAVAALHSLGIPAIGLEG 68
L+ KVA +TGGGSGIGF I+ +HG I R V ++A + G + L
Sbjct: 1 LRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSFPRVSKAARKLAAATGQRCLPLSL 60
Query: 69 DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
DVR V+ + FGK+DILVN AAGNFL PA LS N F+TV++IDS+GTF M
Sbjct: 61 DVRAFPAITAAVDQALKEFGKIDILVNCAAGNFLCPASALSFNAFKTVMDIDSLGTFNMS 120
Query: 129 HEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
+ Y K ATL Q+H +AKAAVD++TR LA+EWG
Sbjct: 121 R--VLYEK------FFRDHGGVIVNITATLGTRGQVLQVHAGSAKAAVDAMTRHLAVEWG 172
Query: 189 TDYAIRVNGIAPGPIKDTAGVSKLAPEE--IRSKATDYMAAYKFGEKWDIAMAALYLAS 245
IR+N +APGPI T G +L + + +K D + + G K ++A ALYLAS
Sbjct: 173 PQN-IRINSLAPGPISGTEGFRRLGGHQASVSTKVLD-IPLQRLGNKTEVAHGALYLAS 229
|
|
| UNIPROTKB|Q9NUI1 DECR2 "Peroxisomal 2,4-dienoyl-CoA reductase" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 374 (136.7 bits), Expect = 1.7e-34, P = 1.7e-34
Identities = 97/243 (39%), Positives = 129/243 (53%)
Query: 5 FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR-KTVLRSAVAALHSLGIPA 63
F D+L+ KVA +TGGGSGIGF I+ +HG I R VL +A + G
Sbjct: 21 FCPDLLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRC 80
Query: 64 IGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVG 123
+ L DVR + V+ + FG++DIL+N AAGNFL PA LS N F+TV++ID+ G
Sbjct: 81 LPLSMDVRAPPAVMAAVDQALKEFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSG 140
Query: 124 TFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSL 183
TF + + Y K ATL Q+H +AKAAVD++TR L
Sbjct: 141 TFNVSR--VLYEK------FFRDHGGVIVNITATLGNRGQALQVHAGSAKAAVDAMTRHL 192
Query: 184 ALEWGTDYAIRVNGIAPGPIKDTAGVSKLA-PEEIRSKATDYMAAYKFGEKWDIAMAALY 242
A+EWG IRVN +APGPI T G+ +L P+ S + G K +IA + LY
Sbjct: 193 AVEWGPQN-IRVNSLAPGPISGTEGLRRLGGPQASLSTKVTASPLQRLGNKTEIAHSVLY 251
Query: 243 LAS 245
LAS
Sbjct: 252 LAS 254
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| P32573 | SPS19_YEAST | 1, ., 3, ., 1, ., 3, 4 | 0.3665 | 0.9437 | 0.8047 | yes | no |
| Q9LTV6 | DECR2_ARATH | 1, ., 3, ., 1, ., 3, 4 | 0.7751 | 1.0 | 0.8355 | yes | no |
| O34717 | FADH_BACSU | 1, ., 3, ., 1, ., 3, 4 | 0.3571 | 0.9236 | 0.9055 | yes | no |
| Q9WYG0 | Y325_THEMA | 1, ., -, ., -, ., - | 0.3319 | 0.8955 | 0.8884 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 1.3.1.34 | 0.991 |
| 3rd Layer | 1.3.1 | 0.976 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 249 | |||
| cd05369 | 249 | cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reducta | 4e-99 | |
| PRK07576 | 264 | PRK07576, PRK07576, short chain dehydrogenase; Pro | 2e-68 | |
| PRK07677 | 252 | PRK07677, PRK07677, short chain dehydrogenase; Pro | 3e-59 | |
| cd05233 | 234 | cd05233, SDR_c, classical (c) SDRs | 2e-51 | |
| PRK05653 | 246 | PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein) | 2e-48 | |
| PRK05557 | 248 | PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) | 5e-47 | |
| PRK08213 | 259 | PRK08213, PRK08213, gluconate 5-dehydrogenase; Pro | 3e-46 | |
| cd05358 | 253 | cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (Glc | 1e-44 | |
| COG1028 | 251 | COG1028, FabG, Dehydrogenases with different speci | 8e-44 | |
| PRK07231 | 251 | PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein) | 4e-42 | |
| cd05333 | 240 | cd05333, BKR_SDR_c, beta-Keto acyl carrier protein | 6e-42 | |
| PRK12826 | 251 | PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-prote | 2e-41 | |
| cd05347 | 248 | cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogena | 4e-41 | |
| PRK05565 | 247 | PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein) | 2e-39 | |
| TIGR01830 | 239 | TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier | 1e-38 | |
| PRK12825 | 249 | PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein) | 1e-37 | |
| cd05362 | 243 | cd05362, THN_reductase-like_SDR_c, tetrahydroxynap | 5e-37 | |
| cd05352 | 252 | cd05352, MDH-like_SDR_c, mannitol dehydrogenase (M | 6e-36 | |
| PRK08936 | 261 | PRK08936, PRK08936, glucose-1-dehydrogenase; Provi | 1e-35 | |
| PRK12939 | 250 | PRK12939, PRK12939, short chain dehydrogenase; Pro | 2e-34 | |
| cd05359 | 242 | cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_c | 7e-34 | |
| PRK06114 | 254 | PRK06114, PRK06114, short chain dehydrogenase; Pro | 4e-33 | |
| PRK08277 | 278 | PRK08277, PRK08277, D-mannonate oxidoreductase; Pr | 5e-33 | |
| PRK06841 | 255 | PRK06841, PRK06841, short chain dehydrogenase; Pro | 2e-32 | |
| PRK07097 | 265 | PRK07097, PRK07097, gluconate 5-dehydrogenase; Pro | 3e-32 | |
| PRK06113 | 255 | PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydro | 5e-32 | |
| PRK12935 | 247 | PRK12935, PRK12935, acetoacetyl-CoA reductase; Pro | 1e-31 | |
| cd05345 | 248 | cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl | 1e-31 | |
| PRK12429 | 258 | PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenas | 1e-31 | |
| cd05364 | 253 | cd05364, SDR_c11, classical (c) SDR, subgroup 11 | 2e-31 | |
| PRK07326 | 237 | PRK07326, PRK07326, short chain dehydrogenase; Pro | 2e-31 | |
| cd05355 | 270 | cd05355, SDR_c1, classical (c) SDR, subgroup 1 | 2e-31 | |
| PRK06463 | 255 | PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein) | 3e-31 | |
| PRK06138 | 252 | PRK06138, PRK06138, short chain dehydrogenase; Pro | 6e-31 | |
| PRK12829 | 264 | PRK12829, PRK12829, short chain dehydrogenase; Pro | 3e-30 | |
| cd08935 | 271 | cd08935, mannonate_red_SDR_c, putative D-mannonate | 3e-30 | |
| cd05344 | 253 | cd05344, BKR_like_SDR_like, putative beta-ketoacyl | 4e-30 | |
| cd05365 | 242 | cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroi | 6e-30 | |
| TIGR01832 | 248 | TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogena | 9e-30 | |
| PRK08063 | 250 | PRK08063, PRK08063, enoyl-(acyl carrier protein) r | 1e-29 | |
| cd05341 | 247 | cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta | 2e-29 | |
| cd05329 | 251 | cd05329, TR_SDR_c, tropinone reductase-I and II (T | 2e-29 | |
| cd05323 | 244 | cd05323, ADH_SDR_c_like, insect type alcohol dehyd | 3e-29 | |
| TIGR01963 | 255 | TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase | 4e-29 | |
| cd05349 | 246 | cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl | 6e-29 | |
| PRK08217 | 253 | PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein) | 6e-29 | |
| PRK06701 | 290 | PRK06701, PRK06701, short chain dehydrogenase; Pro | 8e-29 | |
| PRK06124 | 256 | PRK06124, PRK06124, gluconate 5-dehydrogenase; Pro | 1e-28 | |
| cd05374 | 248 | cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxyster | 8e-28 | |
| cd05366 | 257 | cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol | 2e-27 | |
| PRK07067 | 257 | PRK07067, PRK07067, sorbitol dehydrogenase; Provis | 2e-27 | |
| PRK07856 | 252 | PRK07856, PRK07856, short chain dehydrogenase; Pro | 3e-27 | |
| PRK09242 | 257 | PRK09242, PRK09242, tropinone reductase; Provision | 4e-27 | |
| PRK06935 | 258 | PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrog | 6e-27 | |
| PRK07814 | 263 | PRK07814, PRK07814, short chain dehydrogenase; Pro | 6e-27 | |
| cd05338 | 246 | cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogena | 9e-27 | |
| PRK08324 | 681 | PRK08324, PRK08324, short chain dehydrogenase; Val | 1e-26 | |
| cd08933 | 261 | cd08933, RDH_SDR_c, retinal dehydrogenase-like, cl | 4e-26 | |
| PRK07478 | 254 | PRK07478, PRK07478, short chain dehydrogenase; Pro | 1e-25 | |
| PRK07035 | 252 | PRK07035, PRK07035, short chain dehydrogenase; Pro | 1e-25 | |
| cd05332 | 257 | cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxyste | 1e-25 | |
| PRK06198 | 260 | PRK06198, PRK06198, short chain dehydrogenase; Pro | 1e-25 | |
| PRK06500 | 249 | PRK06500, PRK06500, short chain dehydrogenase; Pro | 1e-25 | |
| cd08930 | 250 | cd08930, SDR_c8, classical (c) SDR, subgroup 8 | 3e-25 | |
| PRK12827 | 249 | PRK12827, PRK12827, short chain dehydrogenase; Pro | 3e-25 | |
| PRK07063 | 260 | PRK07063, PRK07063, short chain dehydrogenase; Pro | 4e-25 | |
| PRK12828 | 239 | PRK12828, PRK12828, short chain dehydrogenase; Pro | 2e-24 | |
| PRK07890 | 258 | PRK07890, PRK07890, short chain dehydrogenase; Pro | 3e-24 | |
| PRK07774 | 250 | PRK07774, PRK07774, short chain dehydrogenase; Pro | 4e-24 | |
| PRK08993 | 253 | PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrog | 5e-24 | |
| cd08934 | 243 | cd08934, CAD_SDR_c, clavulanic acid dehydrogenase | 5e-24 | |
| TIGR03971 | 265 | TIGR03971, SDR_subfam_1, oxidoreductase, SDR famil | 6e-24 | |
| PRK06484 | 520 | PRK06484, PRK06484, short chain dehydrogenase; Val | 6e-24 | |
| cd08944 | 246 | cd08944, SDR_c12, classical (c) SDR, subgroup 12 | 7e-24 | |
| PRK07831 | 262 | PRK07831, PRK07831, short chain dehydrogenase; Pro | 1e-23 | |
| PRK08643 | 256 | PRK08643, PRK08643, acetoin reductase; Validated | 3e-23 | |
| cd08943 | 250 | cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate al | 3e-23 | |
| PRK07109 | 334 | PRK07109, PRK07109, short chain dehydrogenase; Pro | 3e-23 | |
| PRK08278 | 273 | PRK08278, PRK08278, short chain dehydrogenase; Pro | 4e-23 | |
| cd05324 | 225 | cd05324, carb_red_PTCR-like_SDR_c, Porcine testicu | 7e-23 | |
| PRK06200 | 263 | PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydropheny | 9e-23 | |
| PRK12937 | 245 | PRK12937, PRK12937, short chain dehydrogenase; Pro | 9e-23 | |
| PRK12823 | 260 | PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1 | 1e-22 | |
| cd05326 | 249 | cd05326, secoisolariciresinol-DH_like_SDR_c, secoi | 4e-22 | |
| PRK13394 | 262 | PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenas | 9e-22 | |
| PRK06181 | 263 | PRK06181, PRK06181, short chain dehydrogenase; Pro | 1e-21 | |
| cd08942 | 250 | cd08942, RhlG_SDR_c, RhlG and related beta-ketoacy | 1e-21 | |
| cd08936 | 256 | cd08936, CR_SDR_c, Porcine peroxisomal carbonyl re | 2e-21 | |
| cd08940 | 258 | cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydroge | 2e-21 | |
| PRK07666 | 239 | PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein) | 2e-21 | |
| cd05348 | 257 | cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydro | 3e-21 | |
| COG0300 | 265 | COG0300, DltE, Short-chain dehydrogenases of vario | 3e-21 | |
| PRK08628 | 258 | PRK08628, PRK08628, short chain dehydrogenase; Pro | 3e-21 | |
| PRK09135 | 249 | PRK09135, PRK09135, pteridine reductase; Provision | 4e-21 | |
| PRK08085 | 254 | PRK08085, PRK08085, gluconate 5-dehydrogenase; Pro | 4e-21 | |
| PRK06123 | 248 | PRK06123, PRK06123, short chain dehydrogenase; Pro | 6e-21 | |
| PRK06484 | 520 | PRK06484, PRK06484, short chain dehydrogenase; Val | 1e-20 | |
| PRK07523 | 255 | PRK07523, PRK07523, gluconate 5-dehydrogenase; Pro | 1e-20 | |
| cd05363 | 254 | cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH), | 1e-20 | |
| PRK06949 | 258 | PRK06949, PRK06949, short chain dehydrogenase; Pro | 1e-20 | |
| PRK07060 | 245 | PRK07060, PRK07060, short chain dehydrogenase; Pro | 1e-20 | |
| pfam13561 | 239 | pfam13561, adh_short_C2, Enoyl-(Acyl carrier prote | 1e-20 | |
| COG4221 | 246 | COG4221, COG4221, Short-chain alcohol dehydrogenas | 1e-20 | |
| cd05357 | 234 | cd05357, PR_SDR_c, pteridine reductase (PR), class | 1e-20 | |
| cd08939 | 239 | cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine | 1e-20 | |
| TIGR02415 | 254 | TIGR02415, 23BDH, acetoin reductases | 2e-20 | |
| PRK06172 | 253 | PRK06172, PRK06172, short chain dehydrogenase; Pro | 3e-20 | |
| PRK12745 | 256 | PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-prote | 4e-20 | |
| cd08929 | 226 | cd08929, SDR_c4, classical (c) SDR, subgroup 4 | 5e-20 | |
| cd05371 | 252 | cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydr | 7e-20 | |
| PRK06057 | 255 | PRK06057, PRK06057, short chain dehydrogenase; Pro | 1e-19 | |
| PRK06077 | 252 | PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein) | 1e-19 | |
| PRK07062 | 265 | PRK07062, PRK07062, short chain dehydrogenase; Pro | 1e-19 | |
| cd05351 | 244 | cd05351, XR_like_SDR_c, xylulose reductase-like, c | 2e-19 | |
| cd05372 | 250 | cd05372, ENR_SDR, Enoyl acyl carrier protein (ACP) | 2e-19 | |
| PLN02253 | 280 | PLN02253, PLN02253, xanthoxin dehydrogenase | 3e-19 | |
| cd05330 | 257 | cd05330, cyclohexanol_reductase_SDR_c, cyclohexano | 4e-19 | |
| pfam00106 | 167 | pfam00106, adh_short, short chain dehydrogenase | 4e-19 | |
| PRK12481 | 251 | PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrog | 6e-19 | |
| PRK12743 | 256 | PRK12743, PRK12743, oxidoreductase; Provisional | 7e-19 | |
| PRK06398 | 258 | PRK06398, PRK06398, aldose dehydrogenase; Validate | 1e-18 | |
| PRK08642 | 253 | PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein) | 1e-18 | |
| cd05360 | 233 | cd05360, SDR_c3, classical (c) SDR, subgroup 3 | 3e-18 | |
| PRK08226 | 263 | PRK08226, PRK08226, short chain dehydrogenase; Pro | 4e-18 | |
| PRK12746 | 254 | PRK12746, PRK12746, short chain dehydrogenase; Pro | 4e-18 | |
| PRK06171 | 266 | PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydro | 4e-18 | |
| TIGR03325 | 262 | TIGR03325, BphB_TodD, cis-2,3-dihydrobiphenyl-2,3- | 5e-18 | |
| cd08945 | 258 | cd08945, PKR_SDR_c, Polyketide ketoreductase, clas | 6e-18 | |
| PRK05875 | 276 | PRK05875, PRK05875, short chain dehydrogenase; Pro | 6e-18 | |
| cd08937 | 256 | cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa | 8e-18 | |
| TIGR02632 | 676 | TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate | 2e-17 | |
| TIGR01829 | 242 | TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reducta | 2e-17 | |
| cd09762 | 243 | cd09762, HSDL2_SDR_c, human hydroxysteroid dehydro | 3e-17 | |
| PRK09730 | 247 | PRK09730, PRK09730, putative NAD(P)-binding oxidor | 3e-17 | |
| cd05340 | 236 | cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-li | 4e-17 | |
| cd09761 | 242 | cd09761, A3DFK9-like_SDR_c, Clostridium thermocell | 6e-17 | |
| PRK07069 | 251 | PRK07069, PRK07069, short chain dehydrogenase; Val | 6e-17 | |
| cd05370 | 228 | cd05370, SDR_c2, classical (c) SDR, subgroup 2 | 7e-17 | |
| PRK05867 | 253 | PRK05867, PRK05867, short chain dehydrogenase; Pro | 9e-17 | |
| TIGR03206 | 250 | TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxy | 1e-16 | |
| PRK06128 | 300 | PRK06128, PRK06128, oxidoreductase; Provisional | 2e-16 | |
| cd05353 | 250 | cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)- | 2e-16 | |
| COG0623 | 259 | COG0623, FabI, Enoyl-[acyl-carrier-protein] | 3e-16 | |
| TIGR04316 | 250 | TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxyben | 3e-16 | |
| cd05368 | 241 | cd05368, DHRS6_like_SDR_c, human DHRS6-like, class | 4e-16 | |
| PRK08589 | 272 | PRK08589, PRK08589, short chain dehydrogenase; Val | 5e-16 | |
| PRK08265 | 261 | PRK08265, PRK08265, short chain dehydrogenase; Pro | 6e-16 | |
| PRK12747 | 252 | PRK12747, PRK12747, short chain dehydrogenase; Pro | 6e-16 | |
| PRK07985 | 294 | PRK07985, PRK07985, oxidoreductase; Provisional | 8e-16 | |
| cd05343 | 250 | cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, c | 1e-15 | |
| PRK12824 | 245 | PRK12824, PRK12824, acetoacetyl-CoA reductase; Pro | 1e-15 | |
| cd08932 | 223 | cd08932, HetN_like_SDR_c, HetN oxidoreductase-like | 1e-15 | |
| PRK12384 | 259 | PRK12384, PRK12384, sorbitol-6-phosphate dehydroge | 2e-15 | |
| PRK05872 | 296 | PRK05872, PRK05872, short chain dehydrogenase; Pro | 4e-15 | |
| cd09763 | 265 | cd09763, DHRS1-like_SDR_c, human dehydrogenase/red | 4e-15 | |
| PRK08267 | 260 | PRK08267, PRK08267, short chain dehydrogenase; Pro | 1e-14 | |
| PRK05650 | 270 | PRK05650, PRK05650, short chain dehydrogenase; Pro | 3e-14 | |
| PRK06947 | 248 | PRK06947, PRK06947, glucose-1-dehydrogenase; Provi | 3e-14 | |
| PRK12744 | 257 | PRK12744, PRK12744, short chain dehydrogenase; Pro | 4e-14 | |
| cd05337 | 255 | cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl | 4e-14 | |
| cd05327 | 269 | cd05327, retinol-DH_like_SDR_c_like, retinol dehyd | 4e-14 | |
| cd05350 | 239 | cd05350, SDR_c6, classical (c) SDR, subgroup 6 | 6e-14 | |
| PRK08220 | 252 | PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehy | 9e-14 | |
| cd05339 | 243 | cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hy | 2e-13 | |
| PRK07792 | 306 | PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein) | 2e-13 | |
| PRK08416 | 260 | PRK08416, PRK08416, 7-alpha-hydroxysteroid dehydro | 3e-13 | |
| PRK05786 | 238 | PRK05786, fabG, 3-ketoacyl-(acyl-carrier-protein) | 5e-13 | |
| cd05334 | 221 | cd05334, DHPR_SDR_c_like, dihydropteridine reducta | 1e-12 | |
| cd05373 | 238 | cd05373, SDR_c10, classical (c) SDR, subgroup 10 | 2e-12 | |
| PRK06179 | 270 | PRK06179, PRK06179, short chain dehydrogenase; Pro | 3e-12 | |
| cd05322 | 257 | cd05322, SDH_SDR_c_like, Sorbitol 6-phosphate dehy | 4e-12 | |
| PRK07370 | 258 | PRK07370, PRK07370, enoyl-(acyl carrier protein) r | 8e-12 | |
| PRK12936 | 245 | PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-prote | 8e-12 | |
| cd05325 | 233 | cd05325, carb_red_sniffer_like_SDR_c, carbonyl red | 9e-12 | |
| PRK06523 | 260 | PRK06523, PRK06523, short chain dehydrogenase; Pro | 9e-12 | |
| PRK07074 | 257 | PRK07074, PRK07074, short chain dehydrogenase; Pro | 1e-11 | |
| PRK08945 | 247 | PRK08945, PRK08945, putative oxoacyl-(acyl carrier | 1e-11 | |
| PRK09186 | 256 | PRK09186, PRK09186, flagellin modification protein | 1e-11 | |
| PRK07791 | 286 | PRK07791, PRK07791, short chain dehydrogenase; Pro | 2e-11 | |
| PRK07454 | 241 | PRK07454, PRK07454, short chain dehydrogenase; Pro | 3e-11 | |
| PRK08703 | 239 | PRK08703, PRK08703, short chain dehydrogenase; Pro | 3e-11 | |
| cd05346 | 249 | cd05346, SDR_c5, classical (c) SDR, subgroup 5 | 1e-10 | |
| PRK06182 | 273 | PRK06182, PRK06182, short chain dehydrogenase; Val | 1e-10 | |
| cd05356 | 239 | cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxyst | 1e-10 | |
| PRK05866 | 293 | PRK05866, PRK05866, short chain dehydrogenase; Pro | 2e-10 | |
| PRK07201 | 657 | PRK07201, PRK07201, short chain dehydrogenase; Pro | 2e-10 | |
| PRK07825 | 273 | PRK07825, PRK07825, short chain dehydrogenase; Pro | 4e-10 | |
| PRK09072 | 263 | PRK09072, PRK09072, short chain dehydrogenase; Pro | 4e-10 | |
| PRK06194 | 287 | PRK06194, PRK06194, hypothetical protein; Provisio | 5e-10 | |
| PRK08263 | 275 | PRK08263, PRK08263, short chain dehydrogenase; Pro | 5e-10 | |
| TIGR01831 | 239 | TIGR01831, fabG_rel, 3-oxoacyl-(acyl-carrier-prote | 5e-10 | |
| cd08931 | 227 | cd08931, SDR_c9, classical (c) SDR, subgroup 9 | 5e-10 | |
| PRK05876 | 275 | PRK05876, PRK05876, short chain dehydrogenase; Pro | 1e-09 | |
| PRK12859 | 256 | PRK12859, PRK12859, 3-ketoacyl-(acyl-carrier-prote | 2e-09 | |
| cd09806 | 258 | cd09806, type1_17beta-HSD-like_SDR_c, human estrog | 2e-09 | |
| cd05331 | 244 | cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydroz | 3e-09 | |
| PRK06914 | 280 | PRK06914, PRK06914, short chain dehydrogenase; Pro | 3e-09 | |
| PRK09134 | 258 | PRK09134, PRK09134, short chain dehydrogenase; Pro | 3e-09 | |
| PRK06550 | 235 | PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein) | 4e-09 | |
| PRK06125 | 259 | PRK06125, PRK06125, short chain dehydrogenase; Pro | 4e-09 | |
| COG3967 | 245 | COG3967, DltE, Short-chain dehydrogenase involved | 5e-09 | |
| PRK12748 | 256 | PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-prote | 5e-09 | |
| cd11731 | 198 | cd11731, Lin1944_like_SDR_c, Lin1944 and related p | 6e-09 | |
| cd05367 | 241 | cd05367, SPR-like_SDR_c, sepiapterin reductase (SP | 6e-09 | |
| PRK06180 | 277 | PRK06180, PRK06180, short chain dehydrogenase; Pro | 8e-09 | |
| TIGR02685 | 267 | TIGR02685, pter_reduc_Leis, pteridine reductase | 8e-09 | |
| PRK05717 | 255 | PRK05717, PRK05717, oxidoreductase; Validated | 9e-09 | |
| PRK08264 | 238 | PRK08264, PRK08264, short chain dehydrogenase; Val | 1e-08 | |
| PRK07775 | 274 | PRK07775, PRK07775, short chain dehydrogenase; Pro | 1e-08 | |
| cd02266 | 186 | cd02266, SDR, Short-chain dehydrogenases/reductase | 2e-08 | |
| PRK06720 | 169 | PRK06720, PRK06720, hypothetical protein; Provisio | 3e-08 | |
| PRK06196 | 315 | PRK06196, PRK06196, oxidoreductase; Provisional | 4e-08 | |
| PRK07806 | 248 | PRK07806, PRK07806, short chain dehydrogenase; Pro | 5e-08 | |
| PRK12938 | 246 | PRK12938, PRK12938, acetyacetyl-CoA reductase; Pro | 6e-08 | |
| cd05354 | 235 | cd05354, SDR_c7, classical (c) SDR, subgroup 7 | 1e-07 | |
| PLN02730 | 303 | PLN02730, PLN02730, enoyl-[acyl-carrier-protein] r | 1e-07 | |
| PRK10538 | 248 | PRK10538, PRK10538, malonic semialdehyde reductase | 2e-07 | |
| PRK08219 | 227 | PRK08219, PRK08219, short chain dehydrogenase; Pro | 4e-07 | |
| PRK07533 | 258 | PRK07533, PRK07533, enoyl-(acyl carrier protein) r | 4e-07 | |
| PRK05855 | 582 | PRK05855, PRK05855, short chain dehydrogenase; Val | 5e-07 | |
| smart00822 | 180 | smart00822, PKS_KR, This enzymatic domain is part | 5e-07 | |
| PRK08339 | 263 | PRK08339, PRK08339, short chain dehydrogenase; Pro | 8e-07 | |
| PRK07041 | 230 | PRK07041, PRK07041, short chain dehydrogenase; Pro | 9e-07 | |
| PRK08415 | 274 | PRK08415, PRK08415, enoyl-(acyl carrier protein) r | 1e-06 | |
| PRK06300 | 299 | PRK06300, PRK06300, enoyl-(acyl carrier protein) r | 1e-06 | |
| cd08953 | 436 | cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup | 5e-06 | |
| PRK06139 | 330 | PRK06139, PRK06139, short chain dehydrogenase; Pro | 5e-06 | |
| pfam08659 | 181 | pfam08659, KR, KR domain | 8e-06 | |
| PRK07577 | 234 | PRK07577, PRK07577, short chain dehydrogenase; Pro | 8e-06 | |
| PRK12742 | 237 | PRK12742, PRK12742, oxidoreductase; Provisional | 1e-05 | |
| cd09807 | 274 | cd09807, retinol-DH_like_SDR_c, retinol dehydrogen | 1e-05 | |
| PRK07832 | 272 | PRK07832, PRK07832, short chain dehydrogenase; Pro | 2e-05 | |
| PRK08251 | 248 | PRK08251, PRK08251, short chain dehydrogenase; Pro | 2e-05 | |
| PRK06940 | 275 | PRK06940, PRK06940, short chain dehydrogenase; Pro | 2e-05 | |
| PRK07024 | 257 | PRK07024, PRK07024, short chain dehydrogenase; Pro | 3e-05 | |
| cd09809 | 284 | cd09809, human_WWOX_like_SDR_c-like, human WWOX (W | 6e-05 | |
| PRK07889 | 256 | PRK07889, PRK07889, enoyl-(acyl carrier protein) r | 8e-05 | |
| PRK05993 | 277 | PRK05993, PRK05993, short chain dehydrogenase; Pro | 8e-05 | |
| PRK05693 | 274 | PRK05693, PRK05693, short chain dehydrogenase; Pro | 9e-05 | |
| PRK08340 | 259 | PRK08340, PRK08340, glucose-1-dehydrogenase; Provi | 1e-04 | |
| TIGR01500 | 256 | TIGR01500, sepiapter_red, sepiapterin reductase | 1e-04 | |
| PRK06482 | 276 | PRK06482, PRK06482, short chain dehydrogenase; Pro | 2e-04 | |
| PRK06505 | 271 | PRK06505, PRK06505, enoyl-(acyl carrier protein) r | 2e-04 | |
| PRK08303 | 305 | PRK08303, PRK08303, short chain dehydrogenase; Pro | 2e-04 | |
| cd05361 | 242 | cd05361, haloalcohol_DH_SDR_c-like, haloalcohol de | 4e-04 | |
| cd05328 | 250 | cd05328, 3alpha_HSD_SDR_c, alpha hydroxysteroid de | 7e-04 | |
| cd09805 | 281 | cd09805, type2_17beta_HSD-like_SDR_c, human 17beta | 7e-04 | |
| PRK08594 | 257 | PRK08594, PRK08594, enoyl-(acyl carrier protein) r | 8e-04 | |
| PRK08159 | 272 | PRK08159, PRK08159, enoyl-(acyl carrier protein) r | 0.001 | |
| PRK06483 | 236 | PRK06483, PRK06483, dihydromonapterin reductase; P | 0.002 | |
| PRK09291 | 257 | PRK09291, PRK09291, short chain dehydrogenase; Pro | 0.004 | |
| PRK06079 | 252 | PRK06079, PRK06079, enoyl-(acyl carrier protein) r | 0.004 |
| >gnl|CDD|187627 cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reductase (TER) and 2,4-dienoyl-CoA reductase (DECR), atypical (a) SDR | Back alignment and domain information |
|---|
Score = 288 bits (740), Expect = 4e-99
Identities = 116/241 (48%), Positives = 149/241 (61%), Gaps = 10/241 (4%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL-GIPAIGLEG 68
LKGKVA +TGGG+GIG I+ + GA++AI GR+ VL +A + S G A ++
Sbjct: 1 LKGKVAFITGGGTGIGKAIAKAFAELGASVAIAGRKPEVLEAAAEEISSATGGRAHPIQC 60
Query: 69 DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
DVR E V+ T+ FGK+DIL+N AAGNFL PAE LSPNGF+TVI+ID GTF
Sbjct: 61 DVRDPEAVEAAVDETLKEFGKIDILINNAAGNFLAPAESLSPNGFKTVIDIDLNGTFNTT 120
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
K L + GG I+NISAT YT + +Q+H +AAKA VD++TRSLA+EWG
Sbjct: 121 KAVGKRLIEAKH-------GGSILNISATYAYTGSPFQVHSAAAKAGVDALTRSLAVEWG 173
Query: 189 TDYAIRVNGIAPGPIKDTAGVSKLAPEE-IRSKATDYMAAYKFGEKWDIAMAALYLASDA 247
Y IRVN IAPGPI T G+ +LAP K + + + G +IA AL+L SDA
Sbjct: 174 -PYGIRVNAIAPGPIPTTEGMERLAPSGKSEKKMIERVPLGRLGTPEEIANLALFLLSDA 232
Query: 248 G 248
Sbjct: 233 A 233
|
TTER is a peroxisomal protein with a proposed role in fatty acid elongation. Fatty acid synthesis is known to occur in the both endoplasmic reticulum and mitochondria; peroxisomal TER has been proposed as an additional fatty acid elongation system, it reduces the double bond at C-2 as the last step of elongation. This system resembles the mitochondrial system in that acetyl-CoA is used as a carbon donor. TER may also function in phytol metabolism, reducting phytenoyl-CoA to phytanoyl-CoA in peroxisomes. DECR processes double bonds in fatty acids to increase their utility in fatty acid metabolism; it reduces 2,4-dienoyl-CoA to an enoyl-CoA. DECR is active in mitochondria and peroxisomes. This subgroup has the Gly-rich NAD-binding motif of the classical SDR family, but does not display strong identity to the canonical active site tetrad, and lacks the characteristic Tyr at the usual position. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 249 |
| >gnl|CDD|236056 PRK07576, PRK07576, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 211 bits (540), Expect = 2e-68
Identities = 98/248 (39%), Positives = 135/248 (54%), Gaps = 14/248 (5%)
Query: 1 MESPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG 60
M + F GK ++ GG SGI I+ + GA +A+ R + + +AVA L G
Sbjct: 1 MTTMFD---FAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAG 57
Query: 61 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID 120
+G+ DVR + FG +D+LV+ AAGNF PA +S NGF+TV++ID
Sbjct: 58 PEGLGVSADVRDYAAVEAAFAQIADEFGPIDVLVSGAAGNFPAPAAGMSANGFKTVVDID 117
Query: 121 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSIT 180
+GTF + A L++ G II ISA + Q HV AAKA VD +T
Sbjct: 118 LLGTFNVLKAAYPLLRR---------PGASIIQISAPQAFVPMPMQAHVCAAKAGVDMLT 168
Query: 181 RSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP-EEIRSKATDYMAAYKFGEKWDIAMA 239
R+LALEWG + IRVN I PGPI T G+++LAP E+++ + + G K DIA A
Sbjct: 169 RTLALEWGPE-GIRVNSIVPGPIAGTEGMARLAPSPELQAAVAQSVPLKRNGTKQDIANA 227
Query: 240 ALYLASDA 247
AL+LASD
Sbjct: 228 ALFLASDM 235
|
Length = 264 |
| >gnl|CDD|181077 PRK07677, PRK07677, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 187 bits (477), Expect = 3e-59
Identities = 96/239 (40%), Positives = 133/239 (55%), Gaps = 10/239 (4%)
Query: 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVR 71
KV ++TGG SG+G ++ + + GA + I GR K L A + + ++ DVR
Sbjct: 1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVR 60
Query: 72 KREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEA 131
ED ++VE FG++D L+N AAGNF+ PAEDLS NG+ +VI+I GTF
Sbjct: 61 NPEDVQKMVEQIDEKFGRIDALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAV 120
Query: 132 LKY-LKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTD 190
KY ++KG +G IIN+ AT + A IH +AAKA V ++TR+LA+EWG
Sbjct: 121 GKYWIEKGIKGN--------IINMVATYAWDAGPGVIHSAAAKAGVLAMTRTLAVEWGRK 172
Query: 191 YAIRVNGIAPGPIKDTAGVSKLA-PEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAG 248
Y IRVN IAPGPI+ T G KL EE + + + G +IA A +L SD
Sbjct: 173 YGIRVNAIAPGPIERTGGADKLWESEEAAKRTIQSVPLGRLGTPEEIAGLAYFLLSDEA 231
|
Length = 252 |
| >gnl|CDD|212491 cd05233, SDR_c, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 167 bits (424), Expect = 2e-51
Identities = 85/233 (36%), Positives = 130/233 (55%), Gaps = 11/233 (4%)
Query: 15 ALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKRE 74
AL+TG SGIG I+ +L + GA + + R + L +AA+ +LG A+ ++ DV E
Sbjct: 1 ALVTGASSGIGRAIARRLAREGAKVVLADRNEEALA-ELAAIEALGGNAVAVQADVSDEE 59
Query: 75 DAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKY 134
D +VE + FG+LDILVN A P E+L+ + V++++ G F++ AL +
Sbjct: 60 DVEALVEEALEEFGRLDILVNNAGIARPGPLEELTDEDWDRVLDVNLTGVFLLTRAALPH 119
Query: 135 LKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIR 194
+KK G GG I+NIS+ Q +A+KAA++ +TRSLALE Y IR
Sbjct: 120 MKKQG--------GGRIVNISSVAGLRPLPGQAAYAASKAALEGLTRSLALELA-PYGIR 170
Query: 195 VNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247
VN +APG + DT ++KL PEE + + + G ++A A ++LASD
Sbjct: 171 VNAVAPGLV-DTPMLAKLGPEEAEKELAAAIPLGRLGTPEEVAEAVVFLASDE 222
|
SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 234 |
| >gnl|CDD|235546 PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Score = 159 bits (405), Expect = 2e-48
Identities = 81/239 (33%), Positives = 118/239 (49%), Gaps = 11/239 (4%)
Query: 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEG 68
L+GK AL+TG GIG I+L+L GA + I + + A L + G A L
Sbjct: 2 SLQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVF 61
Query: 69 DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
DV ++E+ + FG LDILVN A +S + VI+++ GTF +
Sbjct: 62 DVSDEAAVRALIEAAVEAFGALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVV 121
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
AL + K G+ I+NIS+ T Q + SAAKA V T++LALE
Sbjct: 122 RAALPPMIKARYGR--------IVNISSVSGVTGNPGQTNYSAAKAGVIGFTKALALELA 173
Query: 189 TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247
+ I VN +APG I DT L PEE++++ + + G+ ++A A +LASDA
Sbjct: 174 S-RGITVNAVAPGFI-DTDMTEGL-PEEVKAEILKEIPLGRLGQPEEVANAVAFLASDA 229
|
Length = 246 |
| >gnl|CDD|235500 PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Score = 156 bits (396), Expect = 5e-47
Identities = 75/240 (31%), Positives = 113/240 (47%), Gaps = 12/240 (5%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR-KTVLRSAVAALHSLGIPAIGLEG 68
L+GKVAL+TG GIG I+ +L GA + I + + VA + +LG A+ ++G
Sbjct: 3 LEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQG 62
Query: 69 DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
DV E R V+ FG +DILVN A + + VI+ + G F +
Sbjct: 63 DVSDAESVERAVDEAKAEFGGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLT 122
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
+ + K G IINIS+ + Q + +A+KA V T+SLA E
Sbjct: 123 KAVARPMMKQR--------SGRIINISSVVGLMGNPGQANYAASKAGVIGFTKSLARELA 174
Query: 189 TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAG 248
+ I VN +APG I +T L PE+++ + + G+ +IA A +LASD
Sbjct: 175 S-RGITVNAVAPGFI-ETDMTDAL-PEDVKEAILAQIPLGRLGQPEEIASAVAFLASDEA 231
|
Length = 248 |
| >gnl|CDD|181295 PRK08213, PRK08213, gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 154 bits (391), Expect = 3e-46
Identities = 86/245 (35%), Positives = 122/245 (49%), Gaps = 18/245 (7%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L GK AL+TGG G+G +I+ LG+ GA + + R+ L A A L +LGI A+ + D
Sbjct: 10 LSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAAD 69
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
V D R+ E T+ FG +DILVN A + PAED + V+ ++ G F++
Sbjct: 70 VADEADIERLAEETLERFGHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQ 129
Query: 130 EALKYLKKGGRGQASSSSGGIIINIS--ATL--HYTATWYQIHVSAAKAAVDSITRSLAL 185
K G IIN++ A L + I + +K AV + TR+LA
Sbjct: 130 AVAKRSMIPRG-------YGRIINVASVAGLGGNPPEVMDTIAYNTSKGAVINFTRALAA 182
Query: 186 EWGTDYAIRVNGIAPG--PIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYL 243
EWG + IRVN IAPG P K T G + E++ + + G+ D+ AAL L
Sbjct: 183 EWG-PHGIRVNAIAPGFFPTKMTRGTLERLGEDLLAHT----PLGRLGDDEDLKGAALLL 237
Query: 244 ASDAG 248
ASDA
Sbjct: 238 ASDAS 242
|
Length = 259 |
| >gnl|CDD|187616 cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (GlcDH), classical (c) SDRs | Back alignment and domain information |
|---|
Score = 149 bits (379), Expect = 1e-44
Identities = 81/239 (33%), Positives = 122/239 (51%), Gaps = 9/239 (3%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGR-RKTVLRSAVAALHSLGIPAIGLEG 68
LKGKVAL+TG SGIG I+++L GA + + R ++ V + ++G AI ++
Sbjct: 1 LKGKVALVTGASSGIGKAIAIRLATAGANVVVNYRSKEDAAEEVVEEIKAVGGKAIAVQA 60
Query: 69 DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
DV K ED V + +S I FG LDILVN A + +++ + VI+++ G F+
Sbjct: 61 DVSKEEDVVALFQSAIKEFGTLDILVNNAGLQGDASSHEMTLEDWNKVIDVNLTGQFLCA 120
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
EA+K +K S G IIN+S+ ++ +A+K V +T++LA E+
Sbjct: 121 REAIKRFRK-------SKIKGKIINMSSVHEKIPWPGHVNYAASKGGVKMMTKTLAQEYA 173
Query: 189 TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247
IRVN IAPG I E R+ + + GE +IA AA +LASD
Sbjct: 174 -PKGIRVNAIAPGAINTPINAEAWDDPEQRADLLSLIPMGRIGEPEEIAAAAAWLASDE 231
|
GlcDH, is a tetrameric member of the SDR family, it catalyzes the NAD(P)-dependent oxidation of beta-D-glucose to D-glucono-delta-lactone. GlcDH has a typical NAD-binding site glycine-rich pattern as well as the canonical active site tetrad (YXXXK motif plus upstream Ser and Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253 |
| >gnl|CDD|223959 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only] | Back alignment and domain information |
|---|
Score = 148 bits (374), Expect = 8e-44
Identities = 80/245 (32%), Positives = 121/245 (49%), Gaps = 20/245 (8%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR--KTVLRSAVAALHSLGIP-AIGL 66
L GKVAL+TG SGIG I+ L + GA + + RR + + AA+ G A +
Sbjct: 3 LSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAV 62
Query: 67 EGDVRKREDAVR-VVESTINHFGKLDILV-NAAAGNFLVPAEDLSPNGFRTVIEIDSVGT 124
DV E++V +V + FG++DILV NA P E+L+ + VI+++ +G
Sbjct: 63 AADVSDDEESVEALVAAAEEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGA 122
Query: 125 FIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLA 184
F++ AL +KK I+NIS+ Q +A+KAA+ +T++LA
Sbjct: 123 FLLTRAALPLMKK-----------QRIVNISSVAGLGGPPGQAAYAASKAALIGLTKALA 171
Query: 185 LEWGTDYAIRVNGIAPGPIKDTAGVSKL--APEEIRSKATDYMAAYKFGEKWDIAMAALY 242
LE IRVN +APG I DT + L A E + + + G ++A A +
Sbjct: 172 LELA-PRGIRVNAVAPGYI-DTPMTAALESAELEALKRLAARIPLGRLGTPEEVAAAVAF 229
Query: 243 LASDA 247
LASD
Sbjct: 230 LASDE 234
|
Length = 251 |
| >gnl|CDD|235975 PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 143 bits (364), Expect = 4e-42
Identities = 74/245 (30%), Positives = 114/245 (46%), Gaps = 21/245 (8%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L+GKVA++TG SGIG I+ + GA + + R + A + + G AI + D
Sbjct: 3 LEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGG-RAIAVAAD 61
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLV-PAEDLSPNGFRTVIEIDSVGTFIMC 128
V D V + + FG +DILVN A P D+ F + ++ ++
Sbjct: 62 VSDEADVEAAVAAALERFGSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWT 121
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISAT--LHYTA--TWYQIHVSAAKAAVDSITRSLA 184
A+ ++ G GG I+N+++T L WY +A+K AV ++T++LA
Sbjct: 122 QAAVPAMRGEG--------GGAIVNVASTAGLRPRPGLGWY----NASKGAVITLTKALA 169
Query: 185 LEWGTDYAIRVNGIAPGPIKD--TAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALY 242
E G D IRVN +AP ++ E R+K + + G DIA AAL+
Sbjct: 170 AELGPD-KIRVNAVAPVVVETGLLEAFMGEPTPENRAKFLATIPLGRLGTPEDIANAALF 228
Query: 243 LASDA 247
LASD
Sbjct: 229 LASDE 233
|
Length = 251 |
| >gnl|CDD|187594 cd05333, BKR_SDR_c, beta-Keto acyl carrier protein reductase (BKR), involved in Type II FAS, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 142 bits (361), Expect = 6e-42
Identities = 80/237 (33%), Positives = 116/237 (48%), Gaps = 17/237 (7%)
Query: 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK 72
KVAL+TG GIG I+L+L GA +A+ R + V + +LG A LE DV
Sbjct: 1 KVALVTGASRGIGRAIALRLAAEGAKVAVTDRSEEAAAETVEEIKALGGNAAALEADVSD 60
Query: 73 REDAVRVVESTINHFGKLDILVNAA---AGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
RE +VE FG +DILVN A N L+ +S + VI ++ G F +
Sbjct: 61 REAVEALVEKVEAEFGPVDILVNNAGITRDNLLM---RMSEEDWDAVINVNLTGVFNVTQ 117
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
++ + K G+ IINIS+ + Q + +A+KA V T+SLA E +
Sbjct: 118 AVIRAMIKRRSGR--------IINISSVVGLIGNPGQANYAASKAGVIGFTKSLAKELAS 169
Query: 190 DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246
I VN +APG I DT L PE+++ K + + G ++A A +LASD
Sbjct: 170 -RGITVNAVAPGFI-DTDMTDAL-PEKVKEKILKQIPLGRLGTPEEVANAVAFLASD 223
|
This subgroup includes the Escherichai coli K12 BKR, FabG. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 240 |
| >gnl|CDD|183775 PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed | Back alignment and domain information |
|---|
Score = 141 bits (359), Expect = 2e-41
Identities = 73/240 (30%), Positives = 109/240 (45%), Gaps = 11/240 (4%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L+G+VAL+TG GIG I+++L GA + ++ + + + G A + D
Sbjct: 4 LEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVD 63
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
VR R V + + FG+LDILV A L P ++ + VI+++ GTF++
Sbjct: 64 VRDRAALKAAVAAGVEDFGRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQ 123
Query: 130 EALKYLKKGGRGQASSSSGGIIINI-SATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
AL L + G GG I+ S H +A+KA + TR+LALE
Sbjct: 124 AALPALIRAG--------GGRIVLTSSVAGPRVGYPGLAHYAASKAGLVGFTRALALELA 175
Query: 189 TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAG 248
I VN + PG + DT L + + + GE DIA A L+LASD
Sbjct: 176 A-RNITVNSVHPGGV-DTPMAGNLGDAQWAEAIAAAIPLGRLGEPEDIAAAVLFLASDEA 233
|
Length = 251 |
| >gnl|CDD|187605 cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 140 bits (356), Expect = 4e-41
Identities = 82/240 (34%), Positives = 117/240 (48%), Gaps = 13/240 (5%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
LKGKVAL+TG GIGF I+ L + GA I I R + A + G+ A D
Sbjct: 3 LKGKVALVTGASRGIGFGIASGLAEAGANIVINSRNEEKAEEAQQLIEKEGVEATAFTCD 62
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
V E VE+ FGK+DILVN A PAE+ +R VI+++ G F +
Sbjct: 63 VSDEEAIKAAVEAIEEDFGKIDILVNNAGIIRRHPAEEFPEAEWRDVIDVNLNGVFFVSQ 122
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
+++ K G G+ IINI + L +A+K V +T++LA EW
Sbjct: 123 AVARHMIKQGHGK--------IINICSLLSELGGPPVPAYAASKGGVAGLTKALATEWA- 173
Query: 190 DYAIRVNGIAPGPI--KDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247
+ I+VN IAPG + T V +A E + A ++G+ D+ AA++LASDA
Sbjct: 174 RHGIQVNAIAPGYFATEMTEAV--VADPEFNDDILKRIPAGRWGQPEDLVGAAVFLASDA 231
|
Ga5DH catalyzes the NADP-dependent conversion of carbon source D-gluconate and 5-keto-D-gluconate. This SDR subgroup has a classical Gly-rich NAD(P)-binding motif and a conserved active site tetrad pattern. However, it has been proposed that Arg104 (Streptococcus suis Ga5DH numbering), as well as an active site Ca2+, play a critical role in catalysis. In addition to Ga5DHs this subgroup contains Erwinia chrysanthemi KduD which is involved in pectin degradation, and is a putative 2,5-diketo-3-deoxygluconate dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107,15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248 |
| >gnl|CDD|235506 PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 136 bits (345), Expect = 2e-39
Identities = 77/239 (32%), Positives = 118/239 (49%), Gaps = 12/239 (5%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAI-MGRRKTVLRSAVAALHSLGIPAIGLEG 68
L GKVA++TG GIG I+ L K GA + I + + + + G AI ++
Sbjct: 3 LMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKA 62
Query: 69 DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
DV ED +VE + FGK+DILVN A + D++ + VI+++ G ++
Sbjct: 63 DVSSEEDVENLVEQIVEKFGKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLT 122
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
AL Y+ K G+I+NIS+ ++ SA+K AV++ T++LA E
Sbjct: 123 RYALPYMIKRK--------SGVIVNISSIWGLIGASCEVLYSASKGAVNAFTKALAKELA 174
Query: 189 TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247
IRVN +APG I DT S + E+ A + + G+ +IA L+LASD
Sbjct: 175 P-SGIRVNAVAPGAI-DTEMWSSFSEEDKEGLAEEIPLG-RLGKPEEIAKVVLFLASDD 230
|
Length = 247 |
| >gnl|CDD|233590 TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier-protein) reductase | Back alignment and domain information |
|---|
Score = 134 bits (339), Expect = 1e-38
Identities = 80/237 (33%), Positives = 115/237 (48%), Gaps = 18/237 (7%)
Query: 15 ALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK-TVLRSAVAALHSLGIPAIGLEGDVRKR 73
AL+TG GIG I+L+L K GA + I R V L + G+ A+G+ DV R
Sbjct: 1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDR 60
Query: 74 EDAVRVVESTINHFGKLDILVNAA---AGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHE 130
ED VVE G +DILVN A N L+ ++ + VI+ + G F +
Sbjct: 61 EDVKAVVEEIEEELGPIDILVNNAGITRDNLLMRMKEED---WDAVIDTNLTGVFNLTQA 117
Query: 131 ALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTD 190
L+ + K G+ IINIS+ + Q + +A+KA V T+SLA E +
Sbjct: 118 VLRIMIKQRSGR--------IINISSVVGLMGNAGQANYAASKAGVIGFTKSLAKELAS- 168
Query: 191 YAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247
I VN +APG I DT KL E+++ K + +FG ++A A +LASD
Sbjct: 169 RNITVNAVAPGFI-DTDMTDKL-SEKVKKKILSQIPLGRFGTPEEVANAVAFLASDE 223
|
This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239 |
| >gnl|CDD|237218 PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 131 bits (333), Expect = 1e-37
Identities = 74/239 (30%), Positives = 116/239 (48%), Gaps = 12/239 (5%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGR-RKTVLRSAVAALHSLGIPAIGLEG 68
L G+VAL+TG G+G I+L+L + GA + + R + V A+ +LG A ++
Sbjct: 4 LMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQA 63
Query: 69 DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
DV + V + + FG++DILVN A P D+S + + VI+++ G F +
Sbjct: 64 DVTDKAALEAAVAAAVERFGRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLL 123
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
+ ++K GG I+NIS+ + + +AAKA + +T++LA E
Sbjct: 124 RAVVPPMRKQR--------GGRIVNISSVAGLPGWPGRSNYAAAKAGLVGLTKALARELA 175
Query: 189 TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247
+Y I VN +APG I DT E +K + G DIA A +L SDA
Sbjct: 176 -EYGITVNMVAPGDI-DTDMKEATIEEAREAK-DAETPLGRSGTPEDIARAVAFLCSDA 231
|
Length = 249 |
| >gnl|CDD|187620 cd05362, THN_reductase-like_SDR_c, tetrahydroxynaphthalene/trihydroxynaphthalene reductase-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 130 bits (328), Expect = 5e-37
Identities = 81/240 (33%), Positives = 113/240 (47%), Gaps = 13/240 (5%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAI-MGRRKTVLRSAVAALHSLGIPAIGLEG 68
L GKVAL+TG GIG I+ +L + GA++ + K VA + + G AI ++
Sbjct: 1 LAGKVALVTGASRGIGRAIAKRLARDGASVVVNYASSKAAAEEVVAEIEAAGGKAIAVQA 60
Query: 69 DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
DV R+ ++ FG +DILVN A P + S F + +++ G F +
Sbjct: 61 DVSDPSQVARLFDAAEKAFGGVDILVNNAGVMLKKPIAETSEEEFDRMFTVNTKGAFFVL 120
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
EA K L+ GGR IINIS++L T + +KAAV++ TR LA E G
Sbjct: 121 QEAAKRLRDGGR----------IINISSSLTAAYTPNYGAYAGSKAAVEAFTRVLAKELG 170
Query: 189 TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAG 248
I VN +APGP+ DT EE + GE DIA +LAS G
Sbjct: 171 -GRGITVNAVAPGPV-DTDMFYAGKTEEAVEGYAKMSPLGRLGEPEDIAPVVAFLASPDG 228
|
1,3,6,8-tetrahydroxynaphthalene reductase (4HNR) of Magnaporthe grisea and the related 1,3,8-trihydroxynaphthalene reductase (3HNR) are typical members of the SDR family containing the canonical glycine rich NAD(P)-binding site and active site tetrad, and function in fungal melanin biosynthesis. This subgroup also includes an SDR from Norway spruce that may function to protect against both biotic and abitoic stress. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243 |
| >gnl|CDD|187610 cd05352, MDH-like_SDR_c, mannitol dehydrogenase (MDH)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 127 bits (322), Expect = 6e-36
Identities = 79/241 (32%), Positives = 115/241 (47%), Gaps = 14/241 (5%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIM-GRRKTVLRSAVAALHSLGIPAIGLEG 68
LKGKVA++TGG GIG I+ L + GA +AI+ A G+ +
Sbjct: 6 LKGKVAIVTGGSRGIGLAIARALAEAGADVAIIYNSAPRAEEKAEELAKKYGVKTKAYKC 65
Query: 69 DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
DV +E + + FGK+DIL+ A PA D + + VI+++ G F
Sbjct: 66 DVSSQESVEKTFKQIQKDFGKIDILIANAGITVHKPALDYTYEQWNKVIDVNLNGVFNCA 125
Query: 129 HEALKYLKKGGRGQ--ASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALE 186
A K KK G+G ++S G I+N Q +A+KAAV + +SLA+E
Sbjct: 126 QAAAKIFKKQGKGSLIITASMSGTIVNRPQP--------QAAYNASKAAVIHLAKSLAVE 177
Query: 187 WGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246
W Y IRVN I+PG I ++ +E+R K Y+ + ++ A LYLASD
Sbjct: 178 W-AKYFIRVNSISPGYID--TDLTDFVDKELRKKWESYIPLKRIALPEELVGAYLYLASD 234
Query: 247 A 247
A
Sbjct: 235 A 235
|
NADP-mannitol dehydrogenase catalyzes the conversion of fructose to mannitol, an acyclic 6-carbon sugar. MDH is a tetrameric member of the SDR family. This subgroup also includes various other tetrameric SDRs, including Pichia stipitis D-arabinitol dehydrogenase (aka polyol dehydrogenase), Candida albicans Sou1p, a sorbose reductase, and Candida parapsilosis (S)-specific carbonyl reductase (SCR, aka S-specific alcohol dehydrogenase) which catalyzes the enantioselective reduction of 2-hydroxyacetophenone into (S)-1-phenyl-1,2-ethanediol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 252 |
| >gnl|CDD|181585 PRK08936, PRK08936, glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 127 bits (320), Expect = 1e-35
Identities = 72/239 (30%), Positives = 118/239 (49%), Gaps = 11/239 (4%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGR-RKTVLRSAVAALHSLGIPAIGLEG 68
L+GKV ++TGG +G+G ++++ GK A + I R + + G AI ++G
Sbjct: 5 LEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKG 64
Query: 69 DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
DV D V ++++ + FG LD+++N A VP+ ++S + VI + G F+
Sbjct: 65 DVTVESDVVNLIQTAVKEFGTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGS 124
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATW-YQIHVSAAKAAVDSITRSLALEW 187
EA+KY + G IIN+S ++H W +H +A+K V +T +LA+E+
Sbjct: 125 REAIKYFVEHDI-------KGNIINMS-SVHEQIPWPLFVHYAASKGGVKLMTETLAMEY 176
Query: 188 GTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246
IRVN I PG I K A + R+ + G+ +IA A +LAS
Sbjct: 177 APK-GIRVNNIGPGAINTPINAEKFADPKQRADVESMIPMGYIGKPEEIAAVAAWLASS 234
|
Length = 261 |
| >gnl|CDD|183833 PRK12939, PRK12939, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 123 bits (311), Expect = 2e-34
Identities = 76/242 (31%), Positives = 106/242 (43%), Gaps = 16/242 (6%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L GK AL+TG G+G + L + GA +A R AAL + G A + D
Sbjct: 5 LAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAAD 64
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
+ R ++ G LD LVN A A +L + + V+ ++ GTF+M
Sbjct: 65 LADPASVQRFFDAAAAALGGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLR 124
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHV---SAAKAAVDSITRSLALE 186
AL +L+ GRG+ I+N+++ TA W + A+K AV +TRSLA E
Sbjct: 125 AALPHLRDSGRGR--------IVNLASD---TALWGAPKLGAYVASKGAVIGMTRSLARE 173
Query: 187 WGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246
G I VN IAPG A A E A + D+A A L+L SD
Sbjct: 174 LGGR-GITVNAIAPGLTATEATAYVPADERHAYYL-KGRALERLQVPDDVAGAVLFLLSD 231
Query: 247 AG 248
A
Sbjct: 232 AA 233
|
Length = 250 |
| >gnl|CDD|187617 cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_coenzyme A_reductase (ChcA)_like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 122 bits (307), Expect = 7e-34
Identities = 70/236 (29%), Positives = 112/236 (47%), Gaps = 14/236 (5%)
Query: 15 ALLTGGGSGIGFEISLQLGKHGAAIAIMGRR-KTVLRSAVAALHSLGIPAIGLEGDVRKR 73
AL+TGG GIG I+L+L + GA + I R+ K A + LG A+ + DV +
Sbjct: 1 ALVTGGSRGIGKAIALRLAERGADVVINYRKSKDAAAEVAAEIEELGGKAVVVRADVSQP 60
Query: 74 EDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALK 133
+D + + FG+LD+LV+ AA P +L+P + + + +A K
Sbjct: 61 QDVEEMFAAVKERFGRLDVLVSNAAAGAFRPLSELTPAHWDAKMNTNLKALVHCAQQAAK 120
Query: 134 YLKKGGRGQASSSSGGIIINISAT--LHYTATWYQIHVSAAKAAVDSITRSLALEWGTDY 191
+++ G GG I+ IS+ + + + AKAA++++ R LA+E G
Sbjct: 121 LMRERG--------GGRIVAISSLGSIRALPNYLAV--GTAKAALEALVRYLAVELG-PR 169
Query: 192 AIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247
IRVN ++PG I A E++ A A + G D+A A +L SDA
Sbjct: 170 GIRVNAVSPGVIDTDALAHFPNREDLLEAAAANTPAGRVGTPQDVADAVGFLCSDA 225
|
This subgroup contains classical SDR proteins, including members identified as 1-cyclohexenylcarbonyl coenzyme A reductase. ChcA of Streptomyces collinus is implicated in the final reduction step of shikimic acid to ansatrienin. ChcA shows sequence similarity to the SDR family of NAD-binding proteins, but it lacks the conserved Tyr of the characteristic catalytic site. This subgroup also contains the NADH-dependent enoyl-[acyl-carrier-protein(ACP)] reductase FabL from Bacillus subtilis. This enzyme participates in bacterial fatty acid synthesis, in type II fatty-acid synthases and catalyzes the last step in each elongation cycle. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242 |
| >gnl|CDD|180408 PRK06114, PRK06114, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 120 bits (302), Expect = 4e-33
Identities = 76/247 (30%), Positives = 113/247 (45%), Gaps = 25/247 (10%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR-KTVLRSAVAALHSLGIPAIGLEG 68
L G+VA +TG GSGIG I++ L + GA +A+ R L + + G AI +
Sbjct: 6 LDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAA 65
Query: 69 DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
DV + D V T G L + VNAA PAE++ ++TV++I+ G F+ C
Sbjct: 66 DVTSKADLRAAVARTEAELGALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSC 125
Query: 129 HEALKYLKKGGRGQ----ASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLA 184
+ + + G G AS S GII+N Q H +A+KA V +++SLA
Sbjct: 126 QAEARAMLENGGGSIVNIASMS--GIIVNRGLL--------QAHYNASKAGVIHLSKSLA 175
Query: 185 LEWGTDYAIRVNGIAPG----PIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAA 240
+EW IRVN I+PG P+ + MA ++ A
Sbjct: 176 MEW-VGRGIRVNSISPGYTATPMNTRPEMVHQTKLFEEQTPMQRMAKVD-----EMVGPA 229
Query: 241 LYLASDA 247
++L SDA
Sbjct: 230 VFLLSDA 236
|
Length = 254 |
| >gnl|CDD|236216 PRK08277, PRK08277, D-mannonate oxidoreductase; Provisional | Back alignment and domain information |
|---|
Score = 120 bits (304), Expect = 5e-33
Identities = 66/207 (31%), Positives = 101/207 (48%), Gaps = 24/207 (11%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
LKGKVA++TGGG +G ++ +L + GA +AI+ R + + VA + + G A+ ++ D
Sbjct: 8 LKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKAD 67
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGN----------FLVPAE-----DLSPNGFR 114
V +E + + + FG DIL+N A GN + DL GF
Sbjct: 68 VLDKESLEQARQQILEDFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFE 127
Query: 115 TVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKA 174
V +++ +GT + K + GG IINIS+ +T SAAKA
Sbjct: 128 FVFDLNLLGTLLPTQVFAKDMVGRK--------GGNIINISSMNAFTPLTKVPAYSAAKA 179
Query: 175 AVDSITRSLALEWGTDYAIRVNGIAPG 201
A+ + T+ LA+ + IRVN IAPG
Sbjct: 180 AISNFTQWLAVHFAKV-GIRVNAIAPG 205
|
Length = 278 |
| >gnl|CDD|180723 PRK06841, PRK06841, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 118 bits (298), Expect = 2e-32
Identities = 86/238 (36%), Positives = 123/238 (51%), Gaps = 13/238 (5%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L GKVA++TGG SGIG I+ GA +A++ R + V A L G A GL D
Sbjct: 13 LSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAEVAAQLL---GGNAKGLVCD 69
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
V + V + I+ FG++DILVN+A L PAED+S + I+I+ G+F+M
Sbjct: 70 VSDSQSVEAAVAAVISAFGRIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQ 129
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
+++ G GG I+N+++ A + A+KA V +T+ LALEWG
Sbjct: 130 AVGRHMIAAG--------GGKIVNLASQAGVVALERHVAYCASKAGVVGMTKVLALEWG- 180
Query: 190 DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247
Y I VN I+P + T K E +A + A +F +IA AAL+LASDA
Sbjct: 181 PYGITVNAISP-TVVLTELGKKAWAGEKGERAKKLIPAGRFAYPEEIAAAALFLASDA 237
|
Length = 255 |
| >gnl|CDD|235933 PRK07097, PRK07097, gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 118 bits (297), Expect = 3e-32
Identities = 81/250 (32%), Positives = 122/250 (48%), Gaps = 23/250 (9%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
LKGK+AL+TG GIGF I+ K GA I + ++ +AA LGI A G D
Sbjct: 8 LKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCD 67
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
V + +V G +DILVN A +P ++S FR VI+ID FI+
Sbjct: 68 VTDEDGVQAMVSQIEKEVGVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSK 127
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATL----HYTATWYQIHVSAAKAAVDSITRSLAL 185
+ + K G G+ IINI + + T + Y +AAK + +T+++A
Sbjct: 128 AVIPSMIKKGHGK--------IINICSMMSELGRETVSAY----AAAKGGLKMLTKNIAS 175
Query: 186 EWGTDYAIRVNGIAPGPI--KDTAGVSKLAPEEIRSKATDYM----AAYKFGEKWDIAMA 239
E+G + I+ NGI PG I TA + +L + R ++ A ++G+ D+A
Sbjct: 176 EYG-EANIQCNGIGPGYIATPQTAPLRELQADGSRHPFDQFIIAKTPAARWGDPEDLAGP 234
Query: 240 ALYLASDAGQ 249
A++LASDA
Sbjct: 235 AVFLASDASN 244
|
Length = 265 |
| >gnl|CDD|135765 PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 117 bits (295), Expect = 5e-32
Identities = 73/250 (29%), Positives = 113/250 (45%), Gaps = 22/250 (8%)
Query: 2 ESPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGI 61
+ L GK A++TG G+GIG EI++ GA++ + V + LG
Sbjct: 4 SDNLR---LDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGG 60
Query: 62 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGN----FLVPAEDLSPNGFRTVI 117
A D+ ++ + + ++ GK+DILVN A G F +P D FR
Sbjct: 61 QAFACRCDITSEQELSALADFALSKLGKVDILVNNAGGGGPKPFDMPMAD-----FRRAY 115
Query: 118 EIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVD 177
E++ F + ++K G GG+I+ I++ +++KAA
Sbjct: 116 ELNVFSFFHLSQLVAPEMEKNG--------GGVILTITSMAAENKNINMTSYASSKAAAS 167
Query: 178 SITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIA 237
+ R++A + G IRVNGIAPG I A S + P EI K + + G+ DIA
Sbjct: 168 HLVRNMAFDLGEK-NIRVNGIAPGAILTDALKSVITP-EIEQKMLQHTPIRRLGQPQDIA 225
Query: 238 MAALYLASDA 247
AAL+L S A
Sbjct: 226 NAALFLCSPA 235
|
Length = 255 |
| >gnl|CDD|183832 PRK12935, PRK12935, acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Score = 116 bits (292), Expect = 1e-31
Identities = 84/238 (35%), Positives = 122/238 (51%), Gaps = 12/238 (5%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAI-MGRRKTVLRSAVAALHSLGIPAIGLEG 68
L GKVA++TGG GIG I++ L + GA + I K + V L G ++
Sbjct: 4 LNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQA 63
Query: 69 DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
DV K EDA R+VE +NHFGK+DILVN A + L+ + VI+++ F
Sbjct: 64 DVSKVEDANRLVEEAVNHFGKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTT 123
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
L Y+ + + G II+IS+ + + Q + SAAKA + T+SLALE
Sbjct: 124 SAVLPYI--------TEAEEGRIISISSIIGQAGGFGQTNYSAAKAGMLGFTKSLALELA 175
Query: 189 TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246
+ VN I PG I DT V+++ PEE+R K + +FG+ +IA +YL D
Sbjct: 176 KT-NVTVNAICPGFI-DTEMVAEV-PEEVRQKIVAKIPKKRFGQADEIAKGVVYLCRD 230
|
Length = 247 |
| >gnl|CDD|187603 cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 3, classical (c) SDR | Back alignment and domain information |
|---|
Score = 116 bits (292), Expect = 1e-31
Identities = 77/248 (31%), Positives = 119/248 (47%), Gaps = 25/248 (10%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L+GKVA++TG GSG G I+ + + GA + I A + G AI ++ D
Sbjct: 3 LEGKVAIVTGAGSGFGEGIARRFAQEGARVVIADINADGAERVAADI---GEAAIAIQAD 59
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFL-VPAEDLSPNGFRTVIEIDSVGTFIMC 128
V KR D +VE+ ++ FG+LDILVN A P ++ F V ++ ++
Sbjct: 60 VTKRADVEAMVEAALSKFGRLDILVNNAGITHRNKPMLEVDEEEFDRVFAVNVKSIYLSA 119
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTA----TWYQIHVSAAKAAVDSITRSLA 184
+ ++++ G GG+IINI++T TWY +A+K V + T+++A
Sbjct: 120 QALVPHMEEQG--------GGVIINIASTAGLRPRPGLTWY----NASKGWVVTATKAMA 167
Query: 185 LEWGTDYAIRVNGIAPGPIKDTAGVSKLAPE---EIRSKATDYMAAYKFGEKWDIAMAAL 241
+E IRVN + P +T +S E E R+K + + DIA AAL
Sbjct: 168 VELAPR-NIRVNCLCP-VAGETPLLSMFMGEDTPENRAKFRATIPLGRLSTPDDIANAAL 225
Query: 242 YLASDAGQ 249
YLASD
Sbjct: 226 YLASDEAS 233
|
This subgroup includes the putative Brucella melitensis biovar Abortus 2308 BKR, FabG, Mesorhizobium loti MAFF303099 FabG, and other classical SDRs. BKR, a member of the SDR family, catalyzes the NADPH-dependent reduction of acyl carrier protein in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of 4 elongation steps, which are repeated to extend the fatty acid chain thru the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I Fas utilizes one or 2 multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 248 |
| >gnl|CDD|237100 PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 116 bits (292), Expect = 1e-31
Identities = 81/250 (32%), Positives = 115/250 (46%), Gaps = 21/250 (8%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
LKGKVAL+TG SGIG EI+L L K GA + I +A AL G AIG+ D
Sbjct: 2 LKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMD 61
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
V E ++ + FG +DILVN A + P ED ++ +I I G F+
Sbjct: 62 VTDEEAINAGIDYAVETFGGVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTK 121
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
AL +K G GG IIN+++ + + +AK + +T+ +ALE G
Sbjct: 122 AALPIMKAQG--------GGRIINMASVHGLVGSAGKAAYVSAKHGLIGLTKVVALE-GA 172
Query: 190 DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK-----------FGEKWDIAM 238
+ + VN I PG + DT V K P+ + + + F +IA
Sbjct: 173 THGVTVNAICPGYV-DTPLVRKQIPDLAKERGISEEEVLEDVLLPLVPQKRFTTVEEIAD 231
Query: 239 AALYLASDAG 248
AL+LAS A
Sbjct: 232 YALFLASFAA 241
|
Length = 258 |
| >gnl|CDD|187622 cd05364, SDR_c11, classical (c) SDR, subgroup 11 | Back alignment and domain information |
|---|
Score = 115 bits (291), Expect = 2e-31
Identities = 66/245 (26%), Positives = 112/245 (45%), Gaps = 17/245 (6%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPA---IGL 66
L GKVA++TG SGIG ++ + GA +A+ GR L + G+ + +
Sbjct: 1 LSGKVAIITGSSSGIGAGTAILFARLGARLALTGRDAERLEETRQSCLQAGVSEKKILLV 60
Query: 67 EGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFI 126
D+ + E R++ +T+ FG+LDILVN A ED + V+ ++
Sbjct: 61 VADLTEEEGQDRIISTTLAKFGRLDILVNNAGILAKGGGEDQDIEEYDKVMNLNLRAVIY 120
Query: 127 MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALE 186
+ A+ +L K + G I+N+S+ + ++ +KAA+D TR ALE
Sbjct: 121 LTKLAVPHLIK---------TKGEIVNVSSVAGGRSFPGVLYYCISKAALDQFTRCTALE 171
Query: 187 WGTDYAIRVNGIAPG----PIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALY 242
+RVN ++PG G+ + + S+A + + G ++A A +
Sbjct: 172 LAP-KGVRVNSVSPGVIVTGFHRRMGMPEEQYIKFLSRAKETHPLGRPGTVDEVAEAIAF 230
Query: 243 LASDA 247
LASDA
Sbjct: 231 LASDA 235
|
SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 253 |
| >gnl|CDD|235990 PRK07326, PRK07326, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 115 bits (290), Expect = 2e-31
Identities = 71/193 (36%), Positives = 100/193 (51%), Gaps = 13/193 (6%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
LKGKVAL+TGG GIGF I+ L G +AI R + L A A L++ G +GL D
Sbjct: 4 LKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKG-NVLGLAAD 62
Query: 70 VRKREDAVRVVESTINHFGKLDILV-NAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
VR D R V++ + FG LD+L+ NA G+F P E+L+P +R VI+ + G F
Sbjct: 63 VRDEADVQRAVDAIVAAFGGLDVLIANAGVGHF-APVEELTPEEWRLVIDTNLTGAFYTI 121
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
A+ LK+G GG IINIS+ +A+K + + + L+
Sbjct: 122 KAAVPALKRG---------GGYIINISSLAGTNFFAGGAAYNASKFGLVGFSEAAMLDL- 171
Query: 189 TDYAIRVNGIAPG 201
Y I+V+ I PG
Sbjct: 172 RQYGIKVSTIMPG 184
|
Length = 237 |
| >gnl|CDD|187613 cd05355, SDR_c1, classical (c) SDR, subgroup 1 | Back alignment and domain information |
|---|
Score = 116 bits (292), Expect = 2e-31
Identities = 64/206 (31%), Positives = 98/206 (47%), Gaps = 15/206 (7%)
Query: 2 ESPFKG-DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAI--MGRRKTVLRSAVAALHS 58
E +KG LKGK AL+TGG SGIG +++ + GA +AI + + +
Sbjct: 15 EKSYKGSGKLKGKKALITGGDSGIGRAVAIAFAREGADVAINYLPEEEDDAEETKKLIEE 74
Query: 59 LGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPA-EDLSPNGFRTVI 117
G + + GD+ +V+ + FGKLDILVN AA + ED++
Sbjct: 75 EGRKCLLIPGDLGDESFCRDLVKEVVKEFGKLDILVNNAAYQHPQESIEDITTEQLEKTF 134
Query: 118 EIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVD 177
+ F + AL +LKKG IIN ++ Y + + + +A K A+
Sbjct: 135 RTNIFSMFYLTKAALPHLKKGSS----------IINTTSVTAYKGSPHLLDYAATKGAIV 184
Query: 178 SITRSLALEWGTDYAIRVNGIAPGPI 203
+ TR L+L+ + IRVN +APGPI
Sbjct: 185 AFTRGLSLQLA-EKGIRVNAVAPGPI 209
|
These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 270 |
| >gnl|CDD|180576 PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 115 bits (290), Expect = 3e-31
Identities = 79/249 (31%), Positives = 115/249 (46%), Gaps = 34/249 (13%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
KGKVAL+TGG GIG I+ + GA +A++ + L G+ I + D
Sbjct: 5 FKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSA---ENEAKELREKGVFTI--KCD 59
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
V R+ + E FG++D+LVN A +L+P E+ + +I+I+ G +
Sbjct: 60 VGNRDQVKKSKEVVEKEFGRVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTY 119
Query: 130 EALKYLKKGGRGQASSSSGGIIINISA-----TLHYTATWYQIHVSAAKAAVDSITRSLA 184
E L LK S G I+NI++ T T+Y I KA + +TR LA
Sbjct: 120 EFLPLLKL--------SKNGAIVNIASNAGIGTAAEGTTFYAI----TKAGIIILTRRLA 167
Query: 185 LEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEI-------RSKATDYMAAYKFGEKWDIA 237
E G Y IRVN +APG ++ +S + EE R+K G+ DIA
Sbjct: 168 FELG-KYGIRVNAVAPGWVETDMTLSGKSQEEAEKLRELFRNKTVLKT----TGKPEDIA 222
Query: 238 MAALYLASD 246
L+LASD
Sbjct: 223 NIVLFLASD 231
|
Length = 255 |
| >gnl|CDD|235712 PRK06138, PRK06138, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 114 bits (288), Expect = 6e-31
Identities = 73/242 (30%), Positives = 114/242 (47%), Gaps = 14/242 (5%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L G+VA++TG GSGIG + + GA + + R VAA + G A +GD
Sbjct: 3 LAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAA-ERVAAAIAAGGRAFARQGD 61
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
V E +V+ +G+LD+LVN A + V+ ++ G F+
Sbjct: 62 VGSAEAVEALVDFVAARWGRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAK 121
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
A+ +++ G GG I+N ++ L + A+K A+ S+TR++AL+ T
Sbjct: 122 YAIPIMQRQG--------GGSIVNTASQLALAGGRGRAAYVASKGAIASLTRAMALDHAT 173
Query: 190 DYAIRVNGIAPGPIKD---TAGVSKLA-PEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245
D IRVN +APG I ++ A PE +R +FG ++A AAL+LAS
Sbjct: 174 D-GIRVNAVAPGTIDTPYFRRIFARHADPEALREALRARHPMNRFGTAEEVAQAALFLAS 232
Query: 246 DA 247
D
Sbjct: 233 DE 234
|
Length = 252 |
| >gnl|CDD|183778 PRK12829, PRK12829, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 113 bits (284), Expect = 3e-30
Identities = 70/250 (28%), Positives = 110/250 (44%), Gaps = 20/250 (8%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L G L+TGG SGIG I+ + GA + + + L + A L G D
Sbjct: 9 LDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLP--GAKVTATVAD 66
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPA-EDLSPNGFRTVIEIDSVGTFIMC 128
V RV ++ + FG LD+LVN A ++++P + + ++ G F
Sbjct: 67 VADPAQVERVFDTAVERFGGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFA 126
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
A+ LK G GG+II +S+ + +A+K AV + +SLA+E G
Sbjct: 127 RAAVPLLKASGH-------GGVIIALSSVAGRLGYPGRTPYAASKWAVVGLVKSLAIELG 179
Query: 189 TDYAIRVNGIAPG---------PIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMA 239
IRVN I PG I+ A + +E+ + + ++ + E DIA
Sbjct: 180 -PLGIRVNAILPGIVRGPRMRRVIEARAQQLGIGLDEMEQEYLEKISLGRMVEPEDIAAT 238
Query: 240 ALYLASDAGQ 249
AL+LAS A +
Sbjct: 239 ALFLASPAAR 248
|
Length = 264 |
| >gnl|CDD|187640 cd08935, mannonate_red_SDR_c, putative D-mannonate oxidoreductase, classical (c) SDR | Back alignment and domain information |
|---|
Score = 113 bits (284), Expect = 3e-30
Identities = 78/258 (30%), Positives = 115/258 (44%), Gaps = 32/258 (12%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
LK KVA++TGG +G ++ L + GA +A +GR + + +LG AI L D
Sbjct: 3 LKNKVAVITGGTGVLGGAMARALAQAGAKVAALGRNQEKGDKVAKEITALGGRAIALAAD 62
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGN---------FLVPAE-----DLSPNGFRT 115
V R R E + FG +DIL+N A GN P DL G+
Sbjct: 63 VLDRASLERAREEIVAQFGTVDILINGAGGNHPDATTDPEHYEPETEQNFFDLDEEGWEF 122
Query: 116 VIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAA 175
V +++ G+F+ K + + GG IINIS+ ++ SAAKAA
Sbjct: 123 VFDLNLNGSFLPSQVFGKDMLEQK--------GGSIINISSMNAFSPLTKVPAYSAAKAA 174
Query: 176 VDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAY------- 228
V + T+ LA+E+ T +RVN IAPG L + TD
Sbjct: 175 VSNFTQWLAVEFATT-GVRVNAIAPGFFVTPQNRKLLINPD--GSYTDRSNKILGRTPMG 231
Query: 229 KFGEKWDIAMAALYLASD 246
+FG+ ++ A L+LAS+
Sbjct: 232 RFGKPEELLGALLFLASE 249
|
D-mannonate oxidoreductase catalyzes the NAD-dependent interconversion of D-mannonate and D-fructuronate. This subgroup includes Bacillus subtitils UxuB/YjmF, a putative D-mannonate oxidoreductase; the B. subtilis UxuB gene is part of a putative ten-gene operon (the Yjm operon) involved in hexuronate catabolism. Escherichia coli UxuB does not belong to this subgroup. This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 271 |
| >gnl|CDD|187602 cd05344, BKR_like_SDR_like, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR)-like, SDR | Back alignment and domain information |
|---|
Score = 112 bits (282), Expect = 4e-30
Identities = 63/245 (25%), Positives = 109/245 (44%), Gaps = 18/245 (7%)
Query: 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVR 71
GKVAL+T SGIG I+ L + GA +AI R + L A + L + G + + D+
Sbjct: 1 GKVALVTAASSGIGLAIARALAREGARVAICARNRENLERAASELRAGGAGVLAVVADLT 60
Query: 72 KREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEA 131
ED R+VE + FG++DILVN A G P +L+ + ++ + +
Sbjct: 61 DPEDIDRLVEKAGDAFGRVDILVNNAGGPPPGPFAELTDEDWLEAFDLKLLSVIRIVRAV 120
Query: 132 LKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDY 191
L +K+ G I+NIS+ + + A+A + + ++L+ E D
Sbjct: 121 LPGMKE--------RGWGRIVNISSLTVKEPEPNLVLSNVARAGLIGLVKTLSRELAPD- 171
Query: 192 AIRVNGIAPGPI---------KDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALY 242
+ VN + PG I + A ++ EE + + + G+ ++A +
Sbjct: 172 GVTVNSVLPGYIDTERVRRLLEARAEKEGISVEEAEKEVASQIPLGRVGKPEELAALIAF 231
Query: 243 LASDA 247
LAS+
Sbjct: 232 LASEK 236
|
This subgroup resembles the SDR family, but does not have a perfect match to the NAD-binding motif or the catalytic tetrad characteristic of the SDRs. It includes the SDRs, Q9HYA2 from Pseudomonas aeruginosa PAO1 and APE0912 from Aeropyrum pernix K1. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253 |
| >gnl|CDD|187623 cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroid dehydrogenase (7 alpha-HSDH), classical (c) SDRs | Back alignment and domain information |
|---|
Score = 111 bits (280), Expect = 6e-30
Identities = 80/235 (34%), Positives = 119/235 (50%), Gaps = 11/235 (4%)
Query: 14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKR 73
VA++TGG +GIG I+ L K GA++ I + + AA+ G AIGLE +V
Sbjct: 1 VAIVTGGAAGIGKAIAGTLAKAGASVVIADLKSEGAEAVAAAIQQAGGQAIGLECNVTSE 60
Query: 74 EDAVRVVESTINHFGKLDILVNAAAGNFLVPAE-DLSPNGFRTVIEIDSVGTFIMCHEAL 132
+D VV++T++ FG + ILVN A G P + ++ F +++ F +
Sbjct: 61 QDLEAVVKATVSQFGGITILVNNAGGGGPKPFDMPMTEEDFEWAFKLNLFSAFRLSQLCA 120
Query: 133 KYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYA 192
+++K G GG I+NIS+ ++KAAV+ +TR+LA + G
Sbjct: 121 PHMQKAG--------GGAILNISSMSSENKNVRIAAYGSSKAAVNHMTRNLAFDLGPK-G 171
Query: 193 IRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247
IRVN +APG +K A S L P EI + + GE DIA AAL+L S A
Sbjct: 172 IRVNAVAPGAVKTDALASVLTP-EIERAMLKHTPLGRLGEPEDIANAALFLCSPA 225
|
This bacterial subgroup contains 7 alpha-HSDHs, including Escherichia coli 7 alpha-HSDH. 7 alpha-HSDH, a member of the SDR family, catalyzes the NAD+ -dependent dehydrogenation of a hydroxyl group at position 7 of the steroid skeleton of bile acids. In humans the two primary bile acids are cholic and chenodeoxycholic acids, these are formed from cholesterol in the liver. Escherichia coli 7 alpha-HSDH dehydroxylates these bile acids in the human intestine. Mammalian 7 alpha-HSDH activity has been found in livers. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242 |
| >gnl|CDD|188170 TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogenase | Back alignment and domain information |
|---|
Score = 111 bits (279), Expect = 9e-30
Identities = 79/239 (33%), Positives = 118/239 (49%), Gaps = 12/239 (5%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L+GKVAL+TG +G+G I++ L + GA I GR + + +LG + L D
Sbjct: 3 LEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSE--PSETQQQVEALGRRFLSLTAD 60
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
+ E +V+S + FG +DILVN A AE+ S + V+ ++ F +
Sbjct: 61 LSDIEAIKALVDSAVEEFGHIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQ 120
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
A K+ K GR GG IINI++ L + +A+K AV +T+ LA EW
Sbjct: 121 AAAKHFLKQGR-------GGKIINIASMLSFQGGIRVPSYTASKHAVAGLTKLLANEWAA 173
Query: 190 DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKA-TDYMAAYKFGEKWDIAMAALYLASDA 247
I VN IAPG + T L +E R+ A + + A ++G DI A++LAS A
Sbjct: 174 -KGINVNAIAPGYM-ATNNTQALRADEDRNAAILERIPAGRWGTPDDIGGPAVFLASSA 230
|
This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 248 |
| >gnl|CDD|236145 PRK08063, PRK08063, enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 110 bits (278), Expect = 1e-29
Identities = 71/240 (29%), Positives = 111/240 (46%), Gaps = 12/240 (5%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAI-MGRRKTVLRSAVAALHSLGIPAIGLEG 68
GKVAL+TG GIG I+L+L + G IA+ R + + +LG A+ ++
Sbjct: 2 FSGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKA 61
Query: 69 DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
+V E + FG+LD+ VN AA L PA +L + + + I++
Sbjct: 62 NVGDVEKIKEMFAQIDEEFGRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCA 121
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
EA K ++K G GG II++S+ V +KAA++++TR LA+E
Sbjct: 122 QEAAKLMEKVG--------GGKIISLSSLGSIRYLENYTTVGVSKAALEALTRYLAVELA 173
Query: 189 TDYAIRVNGIAPGPIKDTAGVSKLAP-EEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247
I VN ++ G + DT + EE+ A A + E D+A A L+L S
Sbjct: 174 P-KGIAVNAVSGGAV-DTDALKHFPNREELLEDARAKTPAGRMVEPEDVANAVLFLCSPE 231
|
Length = 250 |
| >gnl|CDD|187600 cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 110 bits (278), Expect = 2e-29
Identities = 74/239 (30%), Positives = 109/239 (45%), Gaps = 13/239 (5%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
LKGKVA++TGG G+G + L GA + + ++A A LG A D
Sbjct: 3 LKGKVAIVTGGARGLGLAHARLLVAEGAKVVLSDILDEEGQAAAA---ELGDAARFFHLD 59
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
V + VV++ FG+LD+LVN A E + +R +++I+ G F+
Sbjct: 60 VTDEDGWTAVVDTAREAFGRLDVLVNNAGILTGGTVETTTLEEWRRLLDINLTGVFLGTR 119
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
+ +K+ G GG IIN+S+ +A+K AV +T+S ALE T
Sbjct: 120 AVIPPMKEAG--------GGSIINMSSIEGLVGDPALAAYNASKGAVRGLTKSAALECAT 171
Query: 190 -DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247
Y IRVN + PG I T +L + + GE +IA A +YLASD
Sbjct: 172 QGYGIRVNSVHPGYIY-TPMTDELLIAQGEMGNYPNTPMGRAGEPDEIAYAVVYLASDE 229
|
This subgroup includes members identified as 3beta17beta hydroxysteroid dehydrogenase, 20beta hydroxysteroid dehydrogenase, and R-alcohol dehydrogenase. These proteins exhibit the canonical active site tetrad and glycine rich NAD(P)-binding motif of the classical SDRs. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 247 |
| >gnl|CDD|187590 cd05329, TR_SDR_c, tropinone reductase-I and II (TR-1, and TR-II)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 110 bits (277), Expect = 2e-29
Identities = 70/239 (29%), Positives = 105/239 (43%), Gaps = 10/239 (4%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L+GK AL+TGG GIG+ I +L GA + R + L + G G D
Sbjct: 4 LEGKTALVTGGTKGIGYAIVEELAGLGAEVYTCARNQKELDECLTEWREKGFKVEGSVCD 63
Query: 70 VRKREDAVRVVESTINHF-GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
V R + ++++ +HF GKL+ILVN A N A+D + + ++ + + +
Sbjct: 64 VSSRSERQELMDTVASHFGGKLNILVNNAGTNIRKEAKDYTEEDYSLIMSTNFEAAYHLS 123
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
A LK G G I+ IS+ A A K A++ +TRSLA EW
Sbjct: 124 RLAHPLLKASGNGN--------IVFISSVAGVIAVPSGAPYGATKGALNQLTRSLACEWA 175
Query: 189 TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247
D IRVN +AP I + +E K + +FGE ++A +L A
Sbjct: 176 KD-NIRVNAVAPWVIATPLVEPVIQQKENLDKVIERTPLKRFGEPEEVAALVAFLCMPA 233
|
This subgroup includes TR-I and TR-II; these proteins are members of the SDR family. TRs catalyze the NADPH-dependent reductions of the 3-carbonyl group of tropinone, to a beta-hydroxyl group. TR-I and TR-II produce different stereoisomers from tropinone, TR-I produces tropine (3alpha-hydroxytropane), and TR-II, produces pseudotropine (sigma-tropine, 3beta-hydroxytropane). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 251 |
| >gnl|CDD|187584 cd05323, ADH_SDR_c_like, insect type alcohol dehydrogenase (ADH)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 109 bits (275), Expect = 3e-29
Identities = 69/240 (28%), Positives = 105/240 (43%), Gaps = 19/240 (7%)
Query: 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIP--AIGLEGDV 70
KVA++TGG SGIG + L K GA +AI+ R + A A L ++ A ++ DV
Sbjct: 1 KVAIITGGASGIGLATAKLLLKKGAKVAILDRNENP--GAAAELQAINPKVKATFVQCDV 58
Query: 71 RKREDAVRVVESTINHFGKLDILVNAAAGN---FLVPAEDLSPNGFRTVIEIDSVGTFIM 127
E + I FG++DIL+N A + A L P + I+++ G
Sbjct: 59 TSWEQLAAAFKKAIEKFGRVDILINNAGILDEKSYLFAGKLPPP-WEKTIDVNLTGVINT 117
Query: 128 CHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEW 187
+ AL Y+ K G GG+I+NI + SA+K V TRSLA
Sbjct: 118 TYLALHYMDKNKGG-----KGGVIVNIGSVAGLYPAPQFPVYSASKHGVVGFTRSLADLL 172
Query: 188 GTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247
+RVN I PG +T + ++ +K + + + +A A +YL D
Sbjct: 173 EYKTGVRVNAICPGFT-NTPLL-----PDLVAKEAEMLPSAPTQSPEVVAKAIVYLIEDD 226
|
This subgroup contains insect type ADH, and 15-hydroxyprostaglandin dehydrogenase (15-PGDH) type I; these proteins are classical SDRs. ADH catalyzes the NAD+-dependent oxidation of alcohols to aldehydes/ketones. This subgroup is distinct from the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase/reductase family, and evolved in fruit flies to allow the digestion of fermenting fruit. 15-PGDH catalyzes the NAD-dependent interconversion of (5Z,13E)-(15S)-11alpha,15-dihydroxy-9-oxoprost-13-enoate and (5Z,13E)-11alpha-hydroxy-9,15-dioxoprost-13-enoate, and has a typical SDR glycine-rich NAD-binding motif, which is not fully present in ADH. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244 |
| >gnl|CDD|211705 TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase | Back alignment and domain information |
|---|
Score = 109 bits (275), Expect = 4e-29
Identities = 73/248 (29%), Positives = 111/248 (44%), Gaps = 21/248 (8%)
Query: 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVR 71
GK AL+TG SGIG I+ L GA + + + +A G I L DV
Sbjct: 1 GKTALVTGAASGIGLAIARALAAAGANVVVNDFGEEGAEAAAKVAGDAGGSVIYLPADVT 60
Query: 72 KREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEA 131
K ++ ++ + FG LDILVN A + P E+ P + +I + F A
Sbjct: 61 KEDEIADMIAAAAAEFGGLDILVNNAGIQHVAPIEEFPPEDWDRIIAVMLTSAFHTIRAA 120
Query: 132 LKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDY 191
L ++KK G G+ IINI++ A+ ++ AAK + +T+ LALE ++
Sbjct: 121 LPHMKKQGWGR--------IINIASAHGLVASPFKSAYVAAKHGLIGLTKVLALE-VAEH 171
Query: 192 AIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDY-----------MAAYKFGEKWDIAMAA 240
I VN I PG + T V K ++ +++ +F ++A A
Sbjct: 172 GITVNAICPGYV-RTPLVEKQIADQAKTRGIPEEQVIREVMLKGQPTKRFVTVDEVAETA 230
Query: 241 LYLASDAG 248
LYLASDA
Sbjct: 231 LYLASDAA 238
|
This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. Length = 255 |
| >gnl|CDD|187607 cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP]reductase (BKR), subgroup 2, classical (c) SDR | Back alignment and domain information |
|---|
Score = 109 bits (273), Expect = 6e-29
Identities = 69/240 (28%), Positives = 103/240 (42%), Gaps = 18/240 (7%)
Query: 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK 72
+V L+TG G+G I+ + GA + + R T AVAA G AI ++ DVR
Sbjct: 1 QVVLVTGASRGLGAAIARSFAREGARVVVNYYRSTESAEAVAA--EAGERAIAIQADVRD 58
Query: 73 REDAVRVVESTINHFGKLDILVNAAAGNFLV------PAEDLSPNGFRTVIEIDSVGTFI 126
R+ ++E NHFG +D +VN A +F + + ++ +E G
Sbjct: 59 RDQVQAMIEEAKNHFGPVDTIVNNALIDFPFDPDQRKTFDTIDWEDYQQQLEGAVKGALN 118
Query: 127 MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALE 186
+ L K+ G G+ +INI L + AKAA+ TR++A E
Sbjct: 119 LLQAVLPDFKERGSGR--------VINIGTNLFQNPVVPYHDYTTAKAALLGFTRNMAKE 170
Query: 187 WGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246
G Y I VN ++ G +K T S P+E+ K DIA A L+ AS
Sbjct: 171 LG-PYGITVNMVSGGLLKVT-DASAATPKEVFDAIAQTTPLGKVTTPQDIADAVLFFASP 228
|
This subgroup includes Rhizobium sp. NGR234 FabG1. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246 |
| >gnl|CDD|181297 PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 109 bits (274), Expect = 6e-29
Identities = 73/243 (30%), Positives = 114/243 (46%), Gaps = 20/243 (8%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
LK KV ++TGG G+G ++ L + GA +A++ + L AVA +LG G +
Sbjct: 3 LKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAAN 62
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAA---GNFLVPAED------LSPNGFRTVIEID 120
V ED FG+L+ L+N A LV A+D +S F++VI+++
Sbjct: 63 VTDEEDVEATFAQIAEDFGQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVN 122
Query: 121 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSIT 180
G F+ EA + + G G+IINIS+ Q + SA+KA V ++T
Sbjct: 123 LTGVFLCGREAAAKMIESGS-------KGVIINISSIARA-GNMGQTNYSASKAGVAAMT 174
Query: 181 RSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAA 240
+ A E Y IRV IAPG I+ T + + P E + + + GE +IA
Sbjct: 175 VTWAKELAR-YGIRVAAIAPGVIE-TEMTAAMKP-EALERLEKMIPVGRLGEPEEIAHTV 231
Query: 241 LYL 243
++
Sbjct: 232 RFI 234
|
Length = 253 |
| >gnl|CDD|235853 PRK06701, PRK06701, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 110 bits (276), Expect = 8e-29
Identities = 83/255 (32%), Positives = 114/255 (44%), Gaps = 26/255 (10%)
Query: 2 ESPF-KG-DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIM----GRRKTVLRSAVAA 55
E+P KG LKGKVAL+TGG SGIG +++ K GA IAI+ + V
Sbjct: 34 EAPNYKGSGKLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEK 93
Query: 56 LHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPA---EDLSPNG 112
G+ + + GDV VE T+ G+LDILVN AA F P ED++
Sbjct: 94 ---EGVKCLLIPGDVSDEAFCKDAVEETVRELGRLDILVNNAA--FQYPQQSLEDITAEQ 148
Query: 113 FRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAA 172
+ + F M AL +LK G IIN + Y I SA
Sbjct: 149 LDKTFKTNIYSYFHMTKAALPHLK----------QGSAIINTGSITGYEGNETLIDYSAT 198
Query: 173 KAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGE 232
K A+ + TRSLA IRVN +APGPI S E++ ++ + G+
Sbjct: 199 KGAIHAFTRSLAQSLVQK-GIRVNAVAPGPIWTPLIPSDFDEEKVSQFGSN-TPMQRPGQ 256
Query: 233 KWDIAMAALYLASDA 247
++A A ++LAS
Sbjct: 257 PEELAPAYVFLASPD 271
|
Length = 290 |
| >gnl|CDD|235702 PRK06124, PRK06124, gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 108 bits (271), Expect = 1e-28
Identities = 73/238 (30%), Positives = 105/238 (44%), Gaps = 9/238 (3%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L G+VAL+TG G+GFEI+ L GA + + GR L +AVAAL + G A L D
Sbjct: 9 LAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFD 68
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
+ E G+LDILVN P +L R ++E D V ++
Sbjct: 69 IADEEAVAAAFARIDAEHGRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSR 128
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
A + +K+ G G II I++ A AAK + + R+LA E+G
Sbjct: 129 LAAQRMKRQG--------YGRIIAITSIAGQVARAGDAVYPAAKQGLTGLMRALAAEFGP 180
Query: 190 DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247
+ I N IAPG + A + ++G +IA AA++LAS A
Sbjct: 181 -HGITSNAIAPGYFATETNAAMAADPAVGPWLAQRTPLGRWGRPEEIAGAAVFLASPA 237
|
Length = 256 |
| >gnl|CDD|187632 cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 106 bits (266), Expect = 8e-28
Identities = 60/196 (30%), Positives = 89/196 (45%), Gaps = 20/196 (10%)
Query: 13 KVALLTGGGSGIGFEISLQLGKHG-AAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVR 71
KV L+TG SGIG ++L L G IA R L S L+ LE DV
Sbjct: 1 KVVLITGCSSGIGLALALALAAQGYRVIATA-RNPDKLESLGELLND---NLEVLELDVT 56
Query: 72 KREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEA 131
E V+ I FG++D+LVN A P E+ S R + E++ G +
Sbjct: 57 DEESIKAAVKEVIERFGRIDVLVNNAGYGLFGPLEETSIEEVRELFEVNVFGPLRVTRAF 116
Query: 132 LKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALE---WG 188
L ++K G I+N+S+ T + A+KAA+++++ SL LE +G
Sbjct: 117 LPLMRK--------QGSGRIVNVSSVAGLVPTPFLGPYCASKAALEALSESLRLELAPFG 168
Query: 189 TDYAIRVNGIAPGPIK 204
I+V I PGP++
Sbjct: 169 ----IKVTIIEPGPVR 180
|
17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248 |
| >gnl|CDD|187624 cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol dehydrogenase-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 105 bits (264), Expect = 2e-27
Identities = 62/245 (25%), Positives = 99/245 (40%), Gaps = 18/245 (7%)
Query: 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMG-RRKTVLRSAVAALHSLGIPAIGLEGDV 70
KVA++TG GIG I+ +L G I + + +S + + G A+ + DV
Sbjct: 2 SKVAIITGAAQGIGRAIAERLAADGFNIVLADLNLEEAAKSTIQEISEAGYNAVAVGADV 61
Query: 71 RKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHE 130
++D +++ + FG D++VN A + P ++ + V ++ G
Sbjct: 62 TDKDDVEALIDQAVEKFGSFDVMVNNAGIAPITPLLTITEEDLKKVYAVNVFGVLFGIQA 121
Query: 131 ALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTD 190
A + KK G GG IIN S+ SA+K AV +T++ A E
Sbjct: 122 AARQFKKLGH-------GGKIINASSIAGVQGFPNLGAYSASKFAVRGLTQTAAQELA-P 173
Query: 191 YAIRVNGIAPGPIKDT------AGVSKLA--PEEIRSKATDYMAAYK-FGEKWDIAMAAL 241
I VN APG +K V ++A PE E D+A
Sbjct: 174 KGITVNAYAPGIVKTEMWDYIDEEVGEIAGKPEGEGFAEFSSSIPLGRLSEPEDVAGLVS 233
Query: 242 YLASD 246
+LAS+
Sbjct: 234 FLASE 238
|
2,3-butanediol dehydrogenases (BDHs) catalyze the NAD+ dependent conversion of 2,3-butanediol to acetonin; BDHs are classified into types according to their stereospecificity as to substrates and products. Included in this subgroup are Klebsiella pneumonia meso-BDH which catalyzes meso-2,3-butanediol to D(-)-acetonin, and Corynebacterium glutamicum L-BDH which catalyzes lX+)-2,3-butanediol to L(+)-acetonin. This subgroup is comprised of classical SDRs with the characteristic catalytic triad and NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257 |
| >gnl|CDD|235925 PRK07067, PRK07067, sorbitol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 105 bits (263), Expect = 2e-27
Identities = 77/256 (30%), Positives = 116/256 (45%), Gaps = 40/256 (15%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L+GKVALLTG SGIG ++ + GA + I + A A +G AI + D
Sbjct: 4 LQGKVALLTGAASGIGEAVAERYLAEGARVVIADIK---PARARLAALEIGPAAIAVSLD 60
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
V +++ R+V + + FG +DIL N AA + P D+S + + + ++ G F +
Sbjct: 61 VTRQDSIDRIVAAAVERFGGIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQ 120
Query: 130 EALKYLKKGGRGQASSSSGGIIINISA---------TLHYTATWYQIHVSAAKAAVDSIT 180
+++ + GR GG IIN+++ HY AT KAAV S T
Sbjct: 121 AVARHMVEQGR-------GGKIINMASQAGRRGEALVSHYCAT---------KAAVISYT 164
Query: 181 RSLALEWGTDYAIRVNGIAPGPIKDT----------AGVSKLAPEEIRSKATDYMAAYKF 230
+S AL + I VN IAPG + DT A P E + + + +
Sbjct: 165 QSAALAL-IRHGINVNAIAPGVV-DTPMWDQVDALFARYENRPPGEKKRLVGEAVPLGRM 222
Query: 231 GEKWDIAMAALYLASD 246
G D+ AL+LAS
Sbjct: 223 GVPDDLTGMALFLASA 238
|
Length = 257 |
| >gnl|CDD|236116 PRK07856, PRK07856, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 104 bits (262), Expect = 3e-27
Identities = 71/249 (28%), Positives = 112/249 (44%), Gaps = 37/249 (14%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L G+V L+TGG GIG I+ GA + + GRR A G PA D
Sbjct: 4 LTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRR--------APETVDGRPAEFHAAD 55
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
VR + +V++ + G+LD+LVN A G+ A + SP ++E++ + ++
Sbjct: 56 VRDPDQVAALVDAIVERHGRLDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQ 115
Query: 130 EALKYLKKGGRGQASSSSGGIIINISA---------TLHYTATWYQIHVSAAKAAVDSIT 180
A +++ GG I+NI + T Y AAKA + ++T
Sbjct: 116 AANAVMQQ-------QPGGGSIVNIGSVSGRRPSPGTAAY---------GAAKAGLLNLT 159
Query: 181 RSLALEWGTDYAIRVNGIAPGPIK-DTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMA 239
RSLA+EW +RVN + G ++ + + + E I + A + + DIA A
Sbjct: 160 RSLAVEWAPK--VRVNAVVVGLVRTEQSELHYGDAEGIAAVA-ATVPLGRLATPADIAWA 216
Query: 240 ALYLASDAG 248
L+LASD
Sbjct: 217 CLFLASDLA 225
|
Length = 252 |
| >gnl|CDD|181721 PRK09242, PRK09242, tropinone reductase; Provisional | Back alignment and domain information |
|---|
Score = 104 bits (261), Expect = 4e-27
Identities = 68/241 (28%), Positives = 103/241 (42%), Gaps = 11/241 (4%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL--GIPAIGLE 67
L G+ AL+TG GIG I+ + GA + I+ R L A L GL
Sbjct: 7 LDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLA 66
Query: 68 GDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIM 127
DV ED +++ +H+ L ILVN A GN A D + + +R + E + F +
Sbjct: 67 ADVSDDEDRRAILDWVEDHWDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFEL 126
Query: 128 CHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEW 187
A LK+ + I+NI + T KAA+ +TR+LA+EW
Sbjct: 127 SRYAHPLLKQ--------HASSAIVNIGSVSGLTHVRSGAPYGMTKAALLQMTRNLAVEW 178
Query: 188 GTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247
D IRVN +AP I+ L+ + + + + GE ++A A +L A
Sbjct: 179 AED-GIRVNAVAPWYIRTPLTSGPLSDPDYYEQVIERTPMRRVGEPEEVAAAVAFLCMPA 237
Query: 248 G 248
Sbjct: 238 A 238
|
Length = 257 |
| >gnl|CDD|180761 PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 104 bits (260), Expect = 6e-27
Identities = 74/239 (30%), Positives = 119/239 (49%), Gaps = 12/239 (5%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L GKVA++TGG +G+G ++ L K GA I I+ T + G ++ D
Sbjct: 13 LDGKVAIVTGGNTGLGQGYAVALAKAGADI-IITTHGTNWDETRRLIEKEGRKVTFVQVD 71
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
+ K E A +VV+ + FGK+DILVN A P + + V++I+ + +
Sbjct: 72 LTKPESAEKVVKEALEEFGKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQ 131
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
K + K G G+ IINI++ L + + +A+K V +T++ A E
Sbjct: 132 AVAKVMAKQGSGK--------IINIASMLSFQGGKFVPAYTASKHGVAGLTKAFANELA- 182
Query: 190 DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKAT-DYMAAYKFGEKWDIAMAALYLASDA 247
Y I+VN IAPG IK TA + + ++ R+ + A ++GE D+ AA++LAS A
Sbjct: 183 AYNIQVNAIAPGYIK-TANTAPIRADKNRNDEILKRIPAGRWGEPDDLMGAAVFLASRA 240
|
Length = 258 |
| >gnl|CDD|181131 PRK07814, PRK07814, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 104 bits (261), Expect = 6e-27
Identities = 73/242 (30%), Positives = 106/242 (43%), Gaps = 13/242 (5%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L +VA++TG G G+G I+L + GA + I R ++ L + + G A + D
Sbjct: 8 LDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAAD 67
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
+ E + + FG+LDI+VN G P S + +
Sbjct: 68 LAHPEATAGLAGQAVEAFGRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTV 127
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
A+ + + S GG +INIS+T+ A AKAA+ TR AL
Sbjct: 128 AAVPLMLE-------HSGGGSVINISSTMGRLAGRGFAAYGTAKAALAHYTRLAAL---- 176
Query: 190 DYA--IRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247
D IRVN IAPG I +A A +E+R+ + G+ DIA AA+YLAS A
Sbjct: 177 DLCPRIRVNAIAPGSILTSALEVVAANDELRAPMEKATPLRRLGDPEDIAAAAVYLASPA 236
Query: 248 GQ 249
G
Sbjct: 237 GS 238
|
Length = 263 |
| >gnl|CDD|187597 cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) and human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs | Back alignment and domain information |
|---|
Score = 103 bits (259), Expect = 9e-27
Identities = 67/227 (29%), Positives = 107/227 (47%), Gaps = 23/227 (10%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT------------VLRSAVAALH 57
L GKVA +TG GIG I+L+L K GA + + + + + +
Sbjct: 1 LSGKVAFVTGASRGIGRAIALRLAKAGATVVVAAKTASEGDNGSAKSLPGTIEETAEEIE 60
Query: 58 SLGIPAIGLEGDVRKREDAVR-VVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTV 116
+ G A+ + DVR ED VR +VE+T++ FG+LDILVN A +L ED F +
Sbjct: 61 AAGGQALPIVVDVRD-EDQVRALVEATVDQFGRLDILVNNAGAIWLSLVEDTPAKRFDLM 119
Query: 117 IEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAV 176
++ GT+++ AL ++ K G+G I+NIS L + +A KA +
Sbjct: 120 QRVNLRGTYLLSQAALPHMVKAGQGH--------ILNISPPLSLRPARGDVAYAAGKAGM 171
Query: 177 DSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATD 223
+T LA E + I VN + P +T ++L+ ++A
Sbjct: 172 SRLTLGLAAELR-RHGIAVNSLWPSTAIETPAATELSGGSDPARARS 217
|
This subgroup includes human DHRS1 and human HSDL2 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246 |
| >gnl|CDD|236241 PRK08324, PRK08324, short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 107 bits (270), Expect = 1e-26
Identities = 75/256 (29%), Positives = 109/256 (42%), Gaps = 35/256 (13%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L GKVAL+TG GIG + +L GA + + + +A A L A+G+ D
Sbjct: 420 LAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGPD-RALGVACD 478
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLV-PAEDLSPNGFRTVIEIDSVGTFIMC 128
V E FG +DI+V+ AG + P E+ S +R ++++ G F++
Sbjct: 479 VTDEAAVQAAFEEAALAFGGVDIVVS-NAGIAISGPIEETSDEDWRRSFDVNATGHFLVA 537
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHY---TATWYQIHVSAAKAAVDSITRSLAL 185
EA++ +K G G G I+ S Y AAKAA + R LAL
Sbjct: 538 REAVRIMKAQGLG------GSIVFIASKNAVNPGPNFGAY----GAAKAAELHLVRQLAL 587
Query: 186 EWGTDYAIRVNGIAP------------GPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEK 233
E G D IRVNG+ P I+ A L+ EE+ Y A +
Sbjct: 588 ELGPD-GIRVNGVNPDAVVRGSGIWTGEWIEARAAAYGLSEEEL---EEFYRARNLLKRE 643
Query: 234 W---DIAMAALYLASD 246
D+A A ++LAS
Sbjct: 644 VTPEDVAEAVVFLASG 659
|
Length = 681 |
| >gnl|CDD|187638 cd08933, RDH_SDR_c, retinal dehydrogenase-like, classical (c) SDR | Back alignment and domain information |
|---|
Score = 102 bits (255), Expect = 4e-26
Identities = 62/243 (25%), Positives = 112/243 (46%), Gaps = 16/243 (6%)
Query: 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIP-AIGLEGD 69
KV ++TGG GIG I ++GA + R + ++ + L+ G + D
Sbjct: 8 ADKVVIVTGGSRGIGRGIVRAFVENGAKVVFCARGEAAGQALESELNRAGPGSCKFVPCD 67
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGN-FLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
V K ED ++ T+ FG++D LVN A + ++ S FR ++ ++ + F+
Sbjct: 68 VTKEEDIKTLISVTVERFGRIDCLVNNAGWHPPHQTTDETSAQEFRDLLNLNLISYFLAS 127
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
AL +L+K S G IIN+S+ + A K A+ ++T++LA++
Sbjct: 128 KYALPHLRK---------SQGNIINLSSLVGSIGQKQAAPYVATKGAITAMTKALAVD-E 177
Query: 189 TDYAIRVNGIAPG----PIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLA 244
+ Y +RVN I+PG P+ + + + G + + +AAL+LA
Sbjct: 178 SRYGVRVNCISPGNIWTPLWEELAAQTPDTLATIKEGELAQLLGRMGTEAESGLAALFLA 237
Query: 245 SDA 247
++A
Sbjct: 238 AEA 240
|
These classical SDRs includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the short-chain dehydrogenases/reductase family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 261 |
| >gnl|CDD|180993 PRK07478, PRK07478, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 100 bits (252), Expect = 1e-25
Identities = 75/241 (31%), Positives = 112/241 (46%), Gaps = 13/241 (5%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L GKVA++TG SGIG + + GA + + RR+ L VA + + G A+ L GD
Sbjct: 4 LNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGD 63
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGN-FLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
VR A +V + FG LDI N A + P ++S G+R + + F+
Sbjct: 64 VRDEAYAKALVALAVERFGGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGA 123
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAA-KAAVDSITRSLALEW 187
+ + G GG +I S + +TA + + AA KA + +T+ LA E+
Sbjct: 124 KHQIPAMLARG--------GGSLIFTSTFVGHTAGFPGMAAYAASKAGLIGLTQVLAAEY 175
Query: 188 GTDYAIRVNGIAPGPIKDTAGVSKLAP-EEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246
G IRVN + PG DT + E + A + + +IA AAL+LASD
Sbjct: 176 GAQ-GIRVNALLPGGT-DTPMGRAMGDTPEALAFVAGLHALKRMAQPEEIAQAALFLASD 233
Query: 247 A 247
A
Sbjct: 234 A 234
|
Length = 254 |
| >gnl|CDD|180802 PRK07035, PRK07035, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 100 bits (252), Expect = 1e-25
Identities = 76/241 (31%), Positives = 117/241 (48%), Gaps = 12/241 (4%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L GK+AL+TG GIG I+ L + GA + + R+ ++ A+ + G A L
Sbjct: 6 LTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACH 65
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGN-FLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
+ + E + G+LDILVN AA N + D F+ ++++ G F M
Sbjct: 66 IGEMEQIDALFAHIRERHGRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMS 125
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
EA K +K+ G GG I+N+++ + +Q S KAAV S+T++ A E
Sbjct: 126 VEAGKLMKEQG--------GGSIVNVASVNGVSPGDFQGIYSITKAAVISMTKAFAKECA 177
Query: 189 TDYAIRVNGIAPGPIKDTAGVSKL-APEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247
IRVN + PG + DT S L + I +A ++ + E ++A A LYLASDA
Sbjct: 178 PF-GIRVNALLPG-LTDTKFASALFKNDAILKQALAHIPLRRHAEPSEMAGAVLYLASDA 235
Query: 248 G 248
Sbjct: 236 S 236
|
Length = 252 |
| >gnl|CDD|187593 cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxysteroid dehydrogenase type 1 (11beta-HSD1)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 100 bits (252), Expect = 1e-25
Identities = 57/196 (29%), Positives = 93/196 (47%), Gaps = 10/196 (5%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIP-AIGLEG 68
L+GKV ++TG SGIG E++ L + GA + + RR+ L + LG P +
Sbjct: 1 LQGKVVIITGASSGIGEELAYHLARLGARLVLSARREERLEEVKSECLELGAPSPHVVPL 60
Query: 69 DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
D+ EDA +VVE + FG LDIL+N A + D S + R ++E++ G +
Sbjct: 61 DMSDLEDAEQVVEEALKLFGGLDILINNAGISMRSLFHDTSIDVDRKIMEVNYFGPVALT 120
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
AL +L + +G I+ +S+ ++ +A+K A+ SL E
Sbjct: 121 KAALPHLIERSQGS--------IVVVSSIAGKIGVPFRTAYAASKHALQGFFDSLRAEL- 171
Query: 189 TDYAIRVNGIAPGPIK 204
++ I V + PG I
Sbjct: 172 SEPNISVTVVCPGLID 187
|
Human 11beta_HSD1 catalyzes the NADP(H)-dependent interconversion of cortisone and cortisol. This subgroup also includes human dehydrogenase/reductase SDR family member 7C (DHRS7C) and DHRS7B. These proteins have the GxxxGxG nucleotide binding motif and S-Y-K catalytic triad characteristic of the SDRs, but have an atypical C-terminal domain that contributes to homodimerization contacts. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257 |
| >gnl|CDD|180462 PRK06198, PRK06198, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 100 bits (252), Expect = 1e-25
Identities = 77/251 (30%), Positives = 117/251 (46%), Gaps = 28/251 (11%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAA-IAIMGRRKTVLRSAVAALHSLGIPAIGLEG 68
L GKVAL+TGG G+G I+ + GAA + I GR + A L +LG A+ ++
Sbjct: 4 LDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQA 63
Query: 69 DVRKREDAVRVVESTINHFGKLDILVNAAA----GNFLVPAEDLSPNGFRTVIEIDSVGT 124
D+ ED RVV + FG+LD LVNAA G L D SP F ++
Sbjct: 64 DLSDVEDCRRVVAAADEAFGRLDALVNAAGLTDRGTIL----DTSPELFDRHFAVNVRAP 119
Query: 125 FIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLA 184
F + EA+K +++ R G I+NI + + + A+K A+ ++TR+ A
Sbjct: 120 FFLMQEAIKLMRR--RKAE-----GTIVNIGSMSAHGGQPFLAAYCASKGALATLTRNAA 172
Query: 185 --LEWGTDYAIRVNGIAPGPIKDTAGVSKL------APEEIRSKATDYMAAYKFGEKWDI 236
L IRVNG+ G + T G ++ AP++ KA + + ++
Sbjct: 173 YALLR---NRIRVNGLNIGWM-ATEGEDRIQREFHGAPDDWLEKAAATQPFGRLLDPDEV 228
Query: 237 AMAALYLASDA 247
A A +L SD
Sbjct: 229 ARAVAFLLSDE 239
|
Length = 260 |
| >gnl|CDD|235816 PRK06500, PRK06500, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 100 bits (251), Expect = 1e-25
Identities = 78/243 (32%), Positives = 111/243 (45%), Gaps = 22/243 (9%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L+GK AL+TGG SGIG E + Q GA +AI GR L +A A LG A+ + D
Sbjct: 4 LQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAE---LGESALVIRAD 60
Query: 70 VRKREDAVRVVESTINHFGKLDIL-VNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
+ ++ FG+LD + +NA F P ED F + G + +
Sbjct: 61 AGDVAAQKALAQALAEAFGRLDAVFINAGVAKFA-PLEDWDEAMFDRSFNTNVKGPYFLI 119
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
L L AS I++N S H ++ +A+KAA+ S+ ++L+ E
Sbjct: 120 QALLPLLANP----AS-----IVLNGSINAHIGMPNSSVY-AASKAALLSLAKTLSGEL- 168
Query: 189 TDYAIRVNGIAPGPIKDTAGVSKLA-PEEIRSKATDYMAAY----KFGEKWDIAMAALYL 243
IRVN ++PGP+ T KL PE + A +FG +IA A LYL
Sbjct: 169 LPRGIRVNAVSPGPV-QTPLYGKLGLPEATLDAVAAQIQALVPLGRFGTPEEIAKAVLYL 227
Query: 244 ASD 246
ASD
Sbjct: 228 ASD 230
|
Length = 249 |
| >gnl|CDD|187635 cd08930, SDR_c8, classical (c) SDR, subgroup 8 | Back alignment and domain information |
|---|
Score = 99.3 bits (248), Expect = 3e-25
Identities = 66/251 (26%), Positives = 101/251 (40%), Gaps = 29/251 (11%)
Query: 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL-GIPAIGLEGD 69
+ K+ L+TG IG L GA + + L L +L I LE D
Sbjct: 1 EDKIILITGAAGLIGKAFCKALLSAGARLILADINAPALEQLKEELTNLYKNRVIALELD 60
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLV---PAEDLSPNGFRTVIEIDSVGTFI 126
+ +E ++ES + FG++DIL+N A + V E+ + V+ ++ G F+
Sbjct: 61 ITSKESIKELIESYLEKFGRIDILINNAYPSPKVWGSRFEEFPYEQWNEVLNVNLGGAFL 120
Query: 127 MCHEALKYLKKGGRGQASSSSGGIIINISATL--------HYTATWYQ--IHVSAAKAAV 176
+K KK G IINI++ Y T + S KA +
Sbjct: 121 CSQAFIKLFKK--------QGKGSIINIASIYGVIAPDFRIYENTQMYSPVEYSVIKAGI 172
Query: 177 DSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDI 236
+T+ LA + D IRVN I+PG I + P E K T + D+
Sbjct: 173 IHLTKYLAKYYA-DTGIRVNAISPGGILNN------QPSEFLEKYTKKCPLKRMLNPEDL 225
Query: 237 AMAALYLASDA 247
A ++L SDA
Sbjct: 226 RGAIIFLLSDA 236
|
This subgroup has a fairly well conserved active site tetrad and domain size of the classical SDRs, but has an atypical NAD-binding motif ([ST]G[GA]XGXXG). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250 |
| >gnl|CDD|237219 PRK12827, PRK12827, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 99.4 bits (248), Expect = 3e-25
Identities = 69/242 (28%), Positives = 114/242 (47%), Gaps = 16/242 (6%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL----GIPAIG 65
L + L+TGG G+G I+++L GA + ++ R+ A+ + G A+G
Sbjct: 4 LDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALG 63
Query: 66 LEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTF 125
L DVR +++ + FG+LDILVN A +LS + VI+++ G F
Sbjct: 64 LAFDVRDFAATRAALDAGVEEFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFF 123
Query: 126 IMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLAL 185
+ AL + + R GG I+NI++ Q++ +A+KA + +T++LA
Sbjct: 124 NVTQAALPPMIRARR-------GGRIVNIASVAGVRGNRGQVNYAASKAGLIGLTKTLAN 176
Query: 186 EWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245
E I VN +APG I +T AP E + + + GE ++A +L S
Sbjct: 177 ELA-PRGITVNAVAPGAI-NTPMADNAAPTE---HLLNPVPVQRLGEPDEVAALVAFLVS 231
Query: 246 DA 247
DA
Sbjct: 232 DA 233
|
Length = 249 |
| >gnl|CDD|235924 PRK07063, PRK07063, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 99.4 bits (248), Expect = 4e-25
Identities = 72/247 (29%), Positives = 107/247 (43%), Gaps = 23/247 (9%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPA--IGLE 67
L GKVAL+TG GIG I+ + GAA+A+ + A AA+ A + +
Sbjct: 5 LAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVP 64
Query: 68 GDVRKREDAVRVVESTINHFGKLDILVNAAAGN-FLVPAEDLSPNGFRTVIEIDSVGTFI 126
DV V + FG LD+LVN A N F P ++ +R +D G +
Sbjct: 65 ADVTDAASVAAAVAAAEEAFGPLDVLVNNAGINVFADPLA-MTDEDWRRCFAVDLDGAWN 123
Query: 127 MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALE 186
C L + + GRG I+NI++T + AK + +TR+L +E
Sbjct: 124 GCRAVLPGMVERGRGS--------IVNIASTHAFKIIPGCFPYPVAKHGLLGLTRALGIE 175
Query: 187 WGTDYA---IRVNGIAPGPIKDTAGVSKLA----PEEIRSKATDYMAAYKFGEKWDIAMA 239
YA +RVN IAPG I+ P R++ + G ++AM
Sbjct: 176 ----YAARNVRVNAIAPGYIETQLTEDWWNAQPDPAAARAETLALQPMKRIGRPEEVAMT 231
Query: 240 ALYLASD 246
A++LASD
Sbjct: 232 AVFLASD 238
|
Length = 260 |
| >gnl|CDD|237220 PRK12828, PRK12828, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 96.8 bits (241), Expect = 2e-24
Identities = 67/240 (27%), Positives = 99/240 (41%), Gaps = 21/240 (8%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L+GKV +TGG G+G + L GA +A++GR L + + + + G+ D
Sbjct: 5 LQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGGI--D 62
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
+ + A R V+ FG+LD LVN A D + + + ++ T
Sbjct: 63 LVDPQAARRAVDEVNRQFGRLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASK 122
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
AL L ++S GG I+NI A A +AAKA V +T +LA E
Sbjct: 123 AALPAL--------TASGGGRIVNIGAGAALKAGPGMGAYAAAKAGVARLTEALAAELL- 173
Query: 190 DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGQ 249
D I VN + P I DT P+ S ++ IA +L SD Q
Sbjct: 174 DRGITVNAVLPSII-DTPPNRADMPDADFS---------RWVTPEQIAAVIAFLLSDEAQ 223
|
Length = 239 |
| >gnl|CDD|181159 PRK07890, PRK07890, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 97.0 bits (242), Expect = 3e-24
Identities = 71/248 (28%), Positives = 116/248 (46%), Gaps = 22/248 (8%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
LKGKV +++G G G+G ++++ + GA + + R L A + LG A+ + D
Sbjct: 3 LKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTD 62
Query: 70 VRKREDAVRVVESTINHFGKLDILVN-AAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
+ + +V + FG++D LVN A + P D +R VIE++ +GT +
Sbjct: 63 ITDEDQCANLVALALERFGRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLT 122
Query: 129 HEALKYLKKGGRGQASSSSGGIIINI-SATLHYTATWYQIHVSAAKAAVDSITRSLALEW 187
L + SGG I+ I S L ++ Y + AK A+ + ++SLA E
Sbjct: 123 QAFTPALAE---------SGGSIVMINSMVLRHSQPKYGAY-KMAKGALLAASQSLATEL 172
Query: 188 GTDYAIRVNGIAPG-----PIKD----TAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAM 238
G IRVN +APG P+K AG + E+I ++ + ++A
Sbjct: 173 G-PQGIRVNSVAPGYIWGDPLKGYFRHQAGKYGVTVEQIYAETAANSDLKRLPTDDEVAS 231
Query: 239 AALYLASD 246
A L+LASD
Sbjct: 232 AVLFLASD 239
|
Length = 258 |
| >gnl|CDD|236094 PRK07774, PRK07774, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 96.4 bits (240), Expect = 4e-24
Identities = 68/243 (27%), Positives = 109/243 (44%), Gaps = 18/243 (7%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
KVA++TG GIG + L + GA++ + + + G AI ++ D
Sbjct: 4 FDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVD 63
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAA---GNFLVPAEDLSPNGFRTVIEIDSVGTFI 126
V + A + ++T++ FG +D LVN AA G L + + ++ + ++ G +
Sbjct: 64 VSDPDSAKAMADATVSAFGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALV 123
Query: 127 MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW-YQIHVSAAKAAVDSITRSLAL 185
K++ K G GG I+N S+ TA W Y AK ++ +T+ LA
Sbjct: 124 CTRAVYKHMAKRG--------GGAIVNQSS----TAAWLYSNFYGLAKVGLNGLTQQLAR 171
Query: 186 EWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245
E G IRVN IAPGPI DT + P+E + + + G D+ L+L S
Sbjct: 172 ELGG-MNIRVNAIAPGPI-DTEATRTVTPKEFVADMVKGIPLSRMGTPEDLVGMCLFLLS 229
Query: 246 DAG 248
D
Sbjct: 230 DEA 232
|
Length = 250 |
| >gnl|CDD|181605 PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 96.5 bits (240), Expect = 5e-24
Identities = 72/240 (30%), Positives = 116/240 (48%), Gaps = 12/240 (5%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L+GKVA++TG +G+G ++L L + G I +G + + +LG + L D
Sbjct: 8 LEGKVAVVTGCDTGLGQGMALGLAEAGCDI--VGINIVEPTETIEQVTALGRRFLSLTAD 65
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
+RK + ++E + FG +DILVN A A + S + V+ ++ F M
Sbjct: 66 LRKIDGIPALLERAVAEFGHIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQ 125
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
A K+ G +GG IINI++ L + +A+K+ V +TR +A EW
Sbjct: 126 AAAKHFIAQG-------NGGKIINIASMLSFQGGIRVPSYTASKSGVMGVTRLMANEWAK 178
Query: 190 DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKAT-DYMAAYKFGEKWDIAMAALYLASDAG 248
+ I VN IAPG + T +L +E RS D + A ++G D+ ++LAS A
Sbjct: 179 -HNINVNAIAPGYMA-TNNTQQLRADEQRSAEILDRIPAGRWGLPSDLMGPVVFLASSAS 236
|
Length = 253 |
| >gnl|CDD|187639 cd08934, CAD_SDR_c, clavulanic acid dehydrogenase (CAD), classical (c) SDR | Back alignment and domain information |
|---|
Score = 96.1 bits (239), Expect = 5e-24
Identities = 78/239 (32%), Positives = 107/239 (44%), Gaps = 22/239 (9%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L+GKVAL+TG SGIG + L GAA+AI RR L + L + G A+ LE D
Sbjct: 1 LQGKVALVTGASSGIGEATARALAAEGAAVAIAARRVDRLEALADELEAEGGKALVLELD 60
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
V + VE T+ G+LDILVN A L P ED + +I+ + +G H
Sbjct: 61 VTDEQQVDAAVERTVEALGRLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYTTH 120
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
AL + + G I+NIS+ A +A K V++ + L E T
Sbjct: 121 AALPHHL--------LRNKGTIVNISSVAGRVAVRNSAVYNATKFGVNAFSEGLRQEV-T 171
Query: 190 DYAIRVNGIAPG----PIKD--TAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALY 242
+ +RV I PG ++D T ++K A EE S A DIA A Y
Sbjct: 172 ERGVRVVVIEPGTVDTELRDHITHTITKEAYEERISTIRKLQAE-------DIAAAVRY 223
|
CAD catalyzes the NADP-dependent reduction of clavulanate-9-aldehyde to clavulanic acid, a beta-lactamase inhibitor. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243 |
| >gnl|CDD|234422 TIGR03971, SDR_subfam_1, oxidoreductase, SDR family | Back alignment and domain information |
|---|
Score = 96.4 bits (240), Expect = 6e-24
Identities = 72/257 (28%), Positives = 114/257 (44%), Gaps = 29/257 (11%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTV-------------LRSAVAAL 56
L+GKVA +TG G G +++L GA I + + L +
Sbjct: 1 LEGKVAFITGAARGQGRAHAVRLAAEGADIIAIDLCAPLSDYPTYPLATREDLDETARLV 60
Query: 57 HSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTV 116
+LG + + DVR + VVE + FG+LD++V A + +LS + TV
Sbjct: 61 EALGRKVLARKADVRDLAEVRAVVEDGVEQFGRLDVVVANAGVLSYGRSWELSEEQWDTV 120
Query: 117 IEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAV 176
++I+ G + C + ++ + G +GG II S+ A H +AAK +
Sbjct: 121 LDINLTGVWRTCKAVVPHMIERG-------NGGSIIITSSVAGLKALPGLAHYAAAKHGL 173
Query: 177 DSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK------- 229
+T++LA E +Y IRVN I P + DT ++ A E K + A+
Sbjct: 174 VGLTKTLANELA-EYGIRVNSIHPYSV-DTPMIAPEAMREAFLKYPEAARAFMPALPVSG 231
Query: 230 FGEKWDIAMAALYLASD 246
F D+A A L+LASD
Sbjct: 232 FVPPEDVADAVLWLASD 248
|
Members of this protein subfamily are putative oxidoreductases belonging to the larger SDR family. Members of the present subfamily may occur several to a genome and are largely restricted to genomes that contain members of families TIGR03962, TIGR03967, and TIGR03969. Many members have been annotated by homology as carveol dehydrogenases. Length = 265 |
| >gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 99.5 bits (248), Expect = 6e-24
Identities = 69/246 (28%), Positives = 107/246 (43%), Gaps = 24/246 (9%)
Query: 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDV 70
+ +V L+TG GIG + + G + + R + A SLG L DV
Sbjct: 4 QSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRN---VERARERADSLGPDHHALAMDV 60
Query: 71 RKREDAVRVVESTINHFGKLDILVNAAA--GNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
E FG++D+LVN A + D + F + I+ G +++
Sbjct: 61 SDEAQIREGFEQLHREFGRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVA 120
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
EAL+ + + G G A I+N+++ A + SA+KAAV S+TRSLA EW
Sbjct: 121 REALRLMIEQGHGAA-------IVNVASGAGLVALPKRTAYSASKAAVISLTRSLACEWA 173
Query: 189 TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAY------KFGEKWDIAMAALY 242
IRVN + PG ++ +++ E R+ D A + G +IA A +
Sbjct: 174 AK-GIRVNAVLPGYVR-----TQMVAELERAGKLDPSAVRSRIPLGRLGRPEEIAEAVFF 227
Query: 243 LASDAG 248
LASD
Sbjct: 228 LASDQA 233
|
Length = 520 |
| >gnl|CDD|187648 cd08944, SDR_c12, classical (c) SDR, subgroup 12 | Back alignment and domain information |
|---|
Score = 95.6 bits (238), Expect = 7e-24
Identities = 71/243 (29%), Positives = 111/243 (45%), Gaps = 18/243 (7%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L+GKVA++TG G+GIG + +L + GA + + +A A + + A+ L D
Sbjct: 1 LEGKVAIVTGAGAGIGAACAARLAREGARVVVADID---GGAAQAVVAQIAGGALALRVD 57
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPA-EDLSPNGFRTVIEIDSVGTFIMC 128
V + + E + FG LD+LVN A L PA D + + I+ GTF+ C
Sbjct: 58 VTDEQQVAALFERAVEEFGGLDLLVNNAGAMHLTPAIIDTDLAVWDQTMAINLRGTFLCC 117
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
A + + GG I+N+S+ + A+KAA+ ++TR+LA E
Sbjct: 118 RHAAPRMI--------ARGGGSIVNLSSIAGQSGDPGYGAYGASKAAIRNLTRTLAAELR 169
Query: 189 TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAY-----KFGEKWDIAMAALYL 243
IR N +APG I ++KLA E + + G D+A A ++L
Sbjct: 170 HA-GIRCNALAPGLIDTPLLLAKLAGFEGALGPGGFHLLIHQLQGRLGRPEDVAAAVVFL 228
Query: 244 ASD 246
SD
Sbjct: 229 LSD 231
|
These are classical SDRs, with the canonical active site tetrad and glycine-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 246 |
| >gnl|CDD|236110 PRK07831, PRK07831, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 95.9 bits (239), Expect = 1e-23
Identities = 71/242 (29%), Positives = 121/242 (50%), Gaps = 12/242 (4%)
Query: 8 DILKGKVALLTGG-GSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHS-LGIPAI- 64
+L GKV L+T G+GIG + + + GA + I + L L + LG+ +
Sbjct: 13 GLLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVE 72
Query: 65 GLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGT 124
+ DV ++++ + G+LD+LVN A P D++ + + V+++ GT
Sbjct: 73 AVVCDVTSEAQVDALIDAAVERLGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGT 132
Query: 125 FIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLA 184
F AL+Y++ RG GG+I+N ++ L + A Q H +AAKA V ++TR A
Sbjct: 133 FRATRAALRYMR--ARGH-----GGVIVNNASVLGWRAQHGQAHYAAAKAGVMALTRCSA 185
Query: 185 LEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLA 244
LE +Y +R+N +AP I ++K+ E+ + A + E W++A +LA
Sbjct: 186 LE-AAEYGVRINAVAPS-IAMHPFLAKVTSAELLDELAAREAFGRAAEPWEVANVIAFLA 243
Query: 245 SD 246
SD
Sbjct: 244 SD 245
|
Length = 262 |
| >gnl|CDD|181518 PRK08643, PRK08643, acetoin reductase; Validated | Back alignment and domain information |
|---|
Score = 94.4 bits (235), Expect = 3e-23
Identities = 59/197 (29%), Positives = 94/197 (47%), Gaps = 14/197 (7%)
Query: 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDV 70
KVAL+TG G GIGF I+ +L + G +AI+ + ++A L G AI ++ DV
Sbjct: 1 MSKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADV 60
Query: 71 RKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFI---M 127
R+ V ++ FG L+++VN A P E ++ F V I+ G
Sbjct: 61 SDRDQVFAAVRQVVDTFGDLNVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQA 120
Query: 128 CHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEW 187
EA K L GG+ ++S G++ N ++ S+ K AV +T++ A +
Sbjct: 121 AQEAFKKLGHGGKIINATSQAGVVGNPELAVY----------SSTKFAVRGLTQTAARDL 170
Query: 188 GTDYAIRVNGIAPGPIK 204
++ I VN APG +K
Sbjct: 171 ASE-GITVNAYAPGIVK 186
|
Length = 256 |
| >gnl|CDD|187647 cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 94.4 bits (235), Expect = 3e-23
Identities = 68/215 (31%), Positives = 98/215 (45%), Gaps = 15/215 (6%)
Query: 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVR 71
GKVAL+TGG SGIG I+ +L GAA+ + + VA G A+G++ DV
Sbjct: 1 GKVALVTGGASGIGLAIAKRLAAEGAAVVVADIDPEIAEK-VAEAAQGGPRALGVQCDVT 59
Query: 72 KREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEA 131
E + FG LDI+V+ A P + S + ++I+ G F++ EA
Sbjct: 60 SEAQVQSAFEQAVLEFGGLDIVVSNAGIATSSPIAETSLEDWNRSMDINLTGHFLVSREA 119
Query: 132 LKYLKKGGRGQASSSSGGIIINISATLHYT---ATWYQIHVSAAKAAVDSITRSLALEWG 188
+ +K G G G I+ N S A Y SAAKAA + R LALE G
Sbjct: 120 FRIMKSQGIG------GNIVFNASKNAVAPGPNAAAY----SAAKAAEAHLARCLALEGG 169
Query: 189 TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATD 223
+ IRVN + P + + + + R+KA
Sbjct: 170 -EDGIRVNTVNPDAVFRGSKIWEGVWRAARAKAYG 203
|
This family has bifunctional proteins with an N-terminal aldolase and a C-terminal classical SDR domain. One member is identified as a rhamnulose-1-phosphate aldolase/alcohol dehydrogenase. The SDR domain has a canonical SDR glycine-rich NAD(P) binding motif and a match to the characteristic active site triad. However, it lacks an upstream active site Asn typical of SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250 |
| >gnl|CDD|235935 PRK07109, PRK07109, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 95.8 bits (239), Expect = 3e-23
Identities = 46/177 (25%), Positives = 77/177 (43%), Gaps = 8/177 (4%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
+ +V ++TG +G+G + + GA + ++ R + L + A + + G A+ + D
Sbjct: 6 IGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVAD 65
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
V E + G +D VN A P ED++P FR V E+ +G
Sbjct: 66 VADAEAVQAAADRAEEELGPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTL 125
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALE 186
AL++++ R G II + + L Y + Q AAK A+ T SL E
Sbjct: 126 AALRHMRPRDR--------GAIIQVGSALAYRSIPLQSAYCAAKHAIRGFTDSLRCE 174
|
Length = 334 |
| >gnl|CDD|181349 PRK08278, PRK08278, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 94.6 bits (236), Expect = 4e-23
Identities = 64/211 (30%), Positives = 91/211 (43%), Gaps = 22/211 (10%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTV---------LRSAVAALHSLG 60
L GK +TG GIG I+L+ + GA I I KT + +A + + G
Sbjct: 4 LSGKTLFITGASRGIGLAIALRAARDGANIVIAA--KTAEPHPKLPGTIHTAAEEIEAAG 61
Query: 61 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID 120
A+ L GDVR + V + FG +DI VN A+ L ED F + +I+
Sbjct: 62 GQALPLVGDVRDEDQVAAAVAKAVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQIN 121
Query: 121 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVS--AAKAAVDS 178
GTF++ L +LKK S I+ +S L+ W+ H + AK +
Sbjct: 122 VRGTFLVSQACLPHLKK--------SENPHILTLSPPLNLDPKWFAPHTAYTMAKYGMSL 173
Query: 179 ITRSLALEWGTDYAIRVNGIAPGPIKDTAGV 209
T LA E+ D I VN + P TA V
Sbjct: 174 CTLGLAEEFR-DDGIAVNALWPRTTIATAAV 203
|
Length = 273 |
| >gnl|CDD|187585 cd05324, carb_red_PTCR-like_SDR_c, Porcine testicular carbonyl reductase (PTCR)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 92.7 bits (231), Expect = 7e-23
Identities = 60/194 (30%), Positives = 86/194 (44%), Gaps = 15/194 (7%)
Query: 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVL-RSAVAALHSLGIPAIGLEGDVR 71
KVAL+TG GIGFEI QL K G I+ R ++AV L + G+ + DV
Sbjct: 1 KVALVTGANRGIGFEIVRQLAKSGPGTVILTARDVERGQAAVEKLRAEGLSVRFHQLDVT 60
Query: 72 KREDAVRVVESTINHFGKLDILV-NAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHE 130
+ +G LDILV NA + R ++ + GT +
Sbjct: 61 DDASIEAAADFVEEKYGGLDILVNNAGIAFKGFDDSTPTREQARETMKTNFFGTVDVTQA 120
Query: 131 ALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTD 190
L LKK S G I+N+S+ L + Y +KAA++++TR LA E +
Sbjct: 121 LLPLLKK--------SPAGRIVNVSSGLGSLTSAYG----VSKAALNALTRILAKEL-KE 167
Query: 191 YAIRVNGIAPGPIK 204
I+VN PG +K
Sbjct: 168 TGIKVNACCPGWVK 181
|
PTCR is a classical SDR which catalyzes the NADPH-dependent reduction of ketones on steroids and prostaglandins. Unlike most SDRs, PTCR functions as a monomer. This subgroup also includes human carbonyl reductase 1 (CBR1) and CBR3. CBR1 is an NADPH-dependent SDR with broad substrate specificity and may be responsible for the in vivo reduction of quinones, prostaglandins, and other carbonyl-containing compounds. In addition it includes poppy NADPH-dependent salutaridine reductase which catalyzes the stereospecific reduction of salutaridine to 7(S)-salutaridinol in the biosynthesis of morphine, and Arabidopsis SDR1,a menthone reductase, which catalyzes the reduction of menthone to neomenthol, a compound with antimicrobial activity; SDR1 can also carry out neomenthol oxidation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 225 |
| >gnl|CDD|235739 PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 93.1 bits (232), Expect = 9e-23
Identities = 62/197 (31%), Positives = 92/197 (46%), Gaps = 19/197 (9%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L G+VAL+TGGGSGIG + + GA +A++ R L +++ + + EGD
Sbjct: 4 LHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKL-ASLRQRFGDHVLVV--EGD 60
Query: 70 VRKREDAVRVVESTINHFGKLDILV-NAAAGNFLVPAEDLSPN----GFRTVIEIDSVGT 124
V D R V+ T++ FGKLD V NA ++ D+ F + ++ G
Sbjct: 61 VTSYADNQRAVDQTVDAFGKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGY 120
Query: 125 FIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLA 184
+ AL LK G G +I +S + Y ++ A+K AV + R LA
Sbjct: 121 LLGAKAALPALKASG--------GSMIFTLSNSSFYPGGGGPLYT-ASKHAVVGLVRQLA 171
Query: 185 LEWGTDYAIRVNGIAPG 201
E IRVNG+APG
Sbjct: 172 YELAPK--IRVNGVAPG 186
|
Length = 263 |
| >gnl|CDD|171821 PRK12937, PRK12937, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 92.9 bits (231), Expect = 9e-23
Identities = 71/244 (29%), Positives = 107/244 (43%), Gaps = 21/244 (8%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAA-LHSLGIPAIGLEG 68
L KVA++TG GIG I+ +L G A+A+ + A + + G AI ++
Sbjct: 3 LSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQA 62
Query: 69 DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
DV R+ ++ FG++D+LVN A L D F I + G F++
Sbjct: 63 DVADAAAVTRLFDAAETAFGRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVL 122
Query: 129 HEALKYLKKGGRGQASSSSGGIIINIS----ATLHYTATWYQIHVSAAKAAVDSITRSLA 184
EA ++L +GGR IIN+S A Y +A+KAAV+ + LA
Sbjct: 123 REAARHLGQGGR----------IINLSTSVIALPLPGYGPY----AASKAAVEGLVHVLA 168
Query: 185 LEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLA 244
E I VN +APGP+ + + E+I A + G +IA A +LA
Sbjct: 169 NELRGR-GITVNAVAPGPVATELFFNGKSAEQIDQLA-GLAPLERLGTPEEIAAAVAFLA 226
Query: 245 SDAG 248
G
Sbjct: 227 GPDG 230
|
Length = 245 |
| >gnl|CDD|183772 PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 93.1 bits (232), Expect = 1e-22
Identities = 56/192 (29%), Positives = 91/192 (47%), Gaps = 13/192 (6%)
Query: 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDV 70
GKV ++TG GIG ++L+ GA + ++ R + V A L + G A+ L D+
Sbjct: 7 AGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSELV-HEVAAELRAAGGEALALTADL 65
Query: 71 RKREDAVRVVESTINHFGKLDILVNAAAGN-FLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
A + + + FG++D+L+N G + P E+ I T C
Sbjct: 66 ETYAGAQAAMAAAVEAFGRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCR 125
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
L ++ G GG I+N+S+ T ++ SAAK V+++T SLA E+
Sbjct: 126 AVLPHMLAQG--------GGAIVNVSSIA--TRGINRVPYSAAKGGVNALTASLAFEYA- 174
Query: 190 DYAIRVNGIAPG 201
++ IRVN +APG
Sbjct: 175 EHGIRVNAVAPG 186
|
Length = 260 |
| >gnl|CDD|187587 cd05326, secoisolariciresinol-DH_like_SDR_c, secoisolariciresinol dehydrogenase (secoisolariciresinol-DH)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 91.4 bits (227), Expect = 4e-22
Identities = 74/243 (30%), Positives = 109/243 (44%), Gaps = 18/243 (7%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIG-LEG 68
L GKVA++TGG SGIG + KHGA + I AVAA LG P I +
Sbjct: 2 LDGKVAIITGGASGIGEATARLFAKHGARVVIADIDDD-AGQAVAA--ELGDPDISFVHC 58
Query: 69 DVRKREDAVRVVESTINHFGKLDILVNAAA--GNFLVPAEDLSPNGFRTVIEIDSVGTFI 126
DV D V++ + FG+LDI+ N A G + S F V++++ G F+
Sbjct: 59 DVTVEADVRAAVDTAVARFGRLDIMFNNAGVLGAPCYSILETSLEEFERVLDVNVYGAFL 118
Query: 127 MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALE 186
A + + +G I+++++ +A+K AV +TRS A E
Sbjct: 119 GTKHAARVMIPAKKGS--------IVSVASVAGVVGGLGPHAYTASKHAVLGLTRSAATE 170
Query: 187 WGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFG---EKWDIAMAALYL 243
G ++ IRVN ++P + + E+ + AA G DIA A LYL
Sbjct: 171 LG-EHGIRVNCVSPYGVATPLLTAGFGVEDEAIEEAVRGAANLKGTALRPEDIAAAVLYL 229
Query: 244 ASD 246
ASD
Sbjct: 230 ASD 232
|
Podophyllum secoisolariciresinol-DH is a homo tetrameric, classical SDR that catalyzes the NAD-dependent conversion of (-)-secoisolariciresinol to (-)-matairesinol via a (-)-lactol intermediate. (-)-Matairesinol is an intermediate to various 8'-lignans, including the cancer-preventive mammalian lignan, and those involved in vascular plant defense. This subgroup also includes rice momilactone A synthase which catalyzes the conversion of 3beta-hydroxy-9betaH-pimara-7,15-dien-19,6beta-olide into momilactone A, Arabidopsis ABA2 which during abscisic acid (ABA) biosynthesis, catalyzes the conversion of xanthoxin to abscisic aldehyde and, maize Tasselseed2 which participate in the maize sex determination pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249 |
| >gnl|CDD|184025 PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 90.7 bits (225), Expect = 9e-22
Identities = 62/207 (29%), Positives = 102/207 (49%), Gaps = 9/207 (4%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L GK A++TG SGIG EI+L+L + GAA+AI + + ++ G AIG+ D
Sbjct: 5 LNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMD 64
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
V + ++ FG +DILV+ A + P E+ S ++ + I G F+
Sbjct: 65 VTNEDAVNAGIDKVAERFGSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTK 124
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
ALK++ K R GG++I + + + A+ + AK + + R LA E G
Sbjct: 125 AALKHMYKDDR-------GGVVIYMGSVHSHEASPLKSAYVTAKHGLLGLARVLAKE-GA 176
Query: 190 DYAIRVNGIAPGPIKDTAGVSKLAPEE 216
+ +R + + PG ++ T V K PE+
Sbjct: 177 KHNVRSHVVCPGFVR-TPLVDKQIPEQ 202
|
Length = 262 |
| >gnl|CDD|235726 PRK06181, PRK06181, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 90.0 bits (224), Expect = 1e-21
Identities = 46/143 (32%), Positives = 73/143 (51%), Gaps = 4/143 (2%)
Query: 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVR 71
GKV ++TG GIG ++++L + GA + + R +T L S L G A+ + DV
Sbjct: 1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVS 60
Query: 72 KREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLS-PNGFRTVIEIDSVGTFIMCHE 130
E R++E+ + FG +DILVN A ++L+ + F V+ ++ +G H
Sbjct: 61 DAEACERLIEAAVARFGGIDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHA 120
Query: 131 ALKYLKKGGRGQ--ASSSSGGII 151
AL +LK RGQ SS G+
Sbjct: 121 ALPHLKA-SRGQIVVVSSLAGLT 142
|
Length = 263 |
| >gnl|CDD|187646 cd08942, RhlG_SDR_c, RhlG and related beta-ketoacyl reductases, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 89.8 bits (223), Expect = 1e-21
Identities = 67/242 (27%), Positives = 105/242 (43%), Gaps = 11/242 (4%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
+ GK+ L+TGG GIG I+ + GA + I R+ A L + G I + D
Sbjct: 4 VAGKIVLVTGGSRGIGRMIAQGFLEAGARVIISARKAEACADAAEELSAYG-ECIAIPAD 62
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
+ E +V +LD+LVN A + P E +G+ V++I+ F +
Sbjct: 63 LSSEEGIEALVARVAERSDRLDVLVNNAGATWGAPLEAFPESGWDKVMDINVKSVFFLTQ 122
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHV-SAAKAAVDSITRSLALEWG 188
L L+ + + +INI + + + + A+KAAV +TR LA E
Sbjct: 123 ALLPLLRAAATAENPAR----VINIGSIAGIVVSGLENYSYGASKAAVHQLTRKLAKELA 178
Query: 189 TDYAIRVNGIAPGPI--KDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246
++ I VN IAPG K TA + + ++G D+A A+ LAS
Sbjct: 179 GEH-ITVNAIAPGRFPSKMTAFLLN--DPAALEAEEKSIPLGRWGRPEDMAGLAIMLASR 235
Query: 247 AG 248
AG
Sbjct: 236 AG 237
|
Pseudomonas aeruginosa RhlG is an SDR-family beta-ketoacyl reductase involved in Rhamnolipid biosynthesis. RhlG is similar to but distinct from the FabG family of beta-ketoacyl-acyl carrier protein (ACP) of type II fatty acid synthesis. RhlG and related proteins are classical SDRs, with a canonical active site tetrad and glycine-rich NAD(P)-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250 |
| >gnl|CDD|187641 cd08936, CR_SDR_c, Porcine peroxisomal carbonyl reductase like, classical (c) SDR | Back alignment and domain information |
|---|
Score = 89.9 bits (223), Expect = 2e-21
Identities = 65/240 (27%), Positives = 112/240 (46%), Gaps = 10/240 (4%)
Query: 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLE 67
D L KVAL+T GIG I+ +L + GA + + R++ + AVA L G+ G
Sbjct: 6 DPLANKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQQNVDRAVATLQGEGLSVTGTV 65
Query: 68 GDVRKREDAVRVVESTINHFGKLDILV-NAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFI 126
V K ED R+V + +N G +DILV NAA F D + + +++++ T +
Sbjct: 66 CHVGKAEDRERLVATAVNLHGGVDILVSNAAVNPFFGNILDSTEEVWDKILDVNVKATAL 125
Query: 127 MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALE 186
M + ++K G GG ++ +S+ + + +K A+ +T++LA E
Sbjct: 126 MTKAVVPEMEKRG--------GGSVVIVSSVAAFHPFPGLGPYNVSKTALLGLTKNLAPE 177
Query: 187 WGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246
IRVN +APG IK + + + + + + + G+ D A +L S+
Sbjct: 178 LAPR-NIRVNCLAPGLIKTSFSSALWMDKAVEESMKETLRIRRLGQPEDCAGIVSFLCSE 236
|
This subgroup contains porcine peroxisomal carbonyl reductase and similar proteins. The porcine enzyme efficiently reduces retinals. This subgroup also includes human dehydrogenase/reductase (SDR family) member 4 (DHRS4), and human DHRS4L1. DHRS4 is a peroxisomal enzyme with 3beta-hydroxysteroid dehydrogenase activity; it catalyzes the reduction of 3-keto-C19/C21-steroids into 3beta-hydroxysteroids more efficiently than it does the retinal reduction. The human DHRS4 gene cluster contains DHRS4, DHRS4L2 and DHRS4L1. DHRS4L2 and DHRS4L1 are paralogs of DHRS4, DHRS4L2 being the most recent member. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256 |
| >gnl|CDD|187644 cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydrogenase (HBDH), classical (c) SDRs | Back alignment and domain information |
|---|
Score = 89.8 bits (223), Expect = 2e-21
Identities = 75/256 (29%), Positives = 108/256 (42%), Gaps = 33/256 (12%)
Query: 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT----VLRSAVAALHSLGIPAIGL 66
KGKVAL+TG SGIG I+ L GA I + G +R+ +AA H G+ +
Sbjct: 1 KGKVALVTGSTSGIGLGIARALAAAGANIVLNGFGDAAEIEAVRAGLAAKH--GVKVLYH 58
Query: 67 EGDVRKR---EDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVG 123
D+ K ED V + FG +DILVN A + P ED + +I ++
Sbjct: 59 GADLSKPAAIEDMVAYAQRQ---FGGVDILVNNAGIQHVAPIEDFPTEKWDAIIALNLSA 115
Query: 124 TFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSL 183
F AL ++KK G G+ IINI++ A+ + AAK V +T+ +
Sbjct: 116 VFHTTRLALPHMKKQGWGR--------IINIASVHGLVASANKSAYVAAKHGVVGLTKVV 167
Query: 184 ALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAY-----------KFGE 232
ALE + N I PG + T V K + A +F
Sbjct: 168 ALE-TAGTGVTCNAICPGWV-LTPLVEKQISALAQKNGVPQEQAARELLLEKQPSKQFVT 225
Query: 233 KWDIAMAALYLASDAG 248
+ A++LASDA
Sbjct: 226 PEQLGDTAVFLASDAA 241
|
DHBDH, an NAD+ -dependent enzyme, catalyzes the interconversion of D-3-hydroxybutyrate and acetoacetate. It is a classical SDR, with the canonical NAD-binding motif and active site tetrad. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258 |
| >gnl|CDD|236074 PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 89.0 bits (221), Expect = 2e-21
Identities = 55/195 (28%), Positives = 89/195 (45%), Gaps = 17/195 (8%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L+GK AL+TG G GIG +++ L K G + ++ R + L++ + + G+ + D
Sbjct: 5 LQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATAD 64
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAA----GNFLVPAEDLSPNGFRTVIEIDSVGTF 125
V E+ +E N G +DIL+N A G FL +L P + +I+++ +G +
Sbjct: 65 VSDYEEVTAAIEQLKNELGSIDILINNAGISKFGKFL----ELDPAEWEKIIQVNLMGVY 120
Query: 126 IMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLAL 185
L + + G IINIS+T SA+K V +T SL
Sbjct: 121 YATRAVLPSMIERQSGD--------IINISSTAGQKGAAVTSAYSASKFGVLGLTESLMQ 172
Query: 186 EWGTDYAIRVNGIAP 200
E + IRV + P
Sbjct: 173 EV-RKHNIRVTALTP 186
|
Length = 239 |
| >gnl|CDD|187606 cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 88.9 bits (221), Expect = 3e-21
Identities = 67/217 (30%), Positives = 99/217 (45%), Gaps = 22/217 (10%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
LKG+VAL+TGGGSG+G + + GA +A++ R + + + A G +G+EGD
Sbjct: 2 LKGEVALITGGGSGLGRALVERFVAEGAKVAVLDRSAEKV-AELRADF--GDAVVGVEGD 58
Query: 70 VRKREDAVRVVESTINHFGKLDILV-NAAAGNFL-----VPAEDLSPNGFRTVIEIDSVG 123
VR D R V + FGKLD + NA ++ +P E L F + I+ G
Sbjct: 59 VRSLADNERAVARCVERFGKLDCFIGNAGIWDYSTSLVDIPEEKLDE-AFDELFHINVKG 117
Query: 124 TFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSL 183
+ AL L + G +I +S Y ++ A+K AV + + L
Sbjct: 118 YILGAKAALPALYA--------TEGSVIFTVSNAGFYPGGGGPLYT-ASKHAVVGLVKQL 168
Query: 184 ALEWGTDYAIRVNGIAPGPI-KDTAGVSKLAPEEIRS 219
A E IRVNG+APG + D G + L E
Sbjct: 169 AYELAPH--IRVNGVAPGGMVTDLRGPASLGQGETSI 203
|
cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB) is a classical SDR, it is of particular importance for its role in the degradation of biphenyl/polychlorinated biphenyls(PCBs); PCBs are a significant source of environmental contamination. This subgroup also includes Pseudomonas putida F1 cis-biphenyl-1,2-dihydrodiol-1,2-dehydrogenase (aka cis-benzene glycol dehydrogenase, encoded by the bnzE gene), which participates in benzene metabolism. In addition it includes Pseudomonas sp. C18 putative 1,2-dihydroxy-1,2-dihydronaphthalene dehydrogenase (aka dibenzothiophene dihydrodiol dehydrogenase, encoded by the doxE gene) which participates in an upper naphthalene catabolic pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257 |
| >gnl|CDD|223377 COG0300, DltE, Short-chain dehydrogenases of various substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Score = 88.8 bits (221), Expect = 3e-21
Identities = 58/215 (26%), Positives = 95/215 (44%), Gaps = 16/215 (7%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL-GIPAIGLEG 68
+KGK AL+TG SGIG E++ QL + G + ++ RR+ L + L G+ +
Sbjct: 4 MKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPA 63
Query: 69 DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
D+ E R+ + G +D+LVN A P +LS + +I+++ + +
Sbjct: 64 DLSDPEALERLEDELKERGGPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLT 123
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
L + + G G IINI + T Y SA KA V S + +L E
Sbjct: 124 KAVLPGMVERGAGH--------IINIGSAAGLIPTPYMAVYSATKAFVLSFSEALREELK 175
Query: 189 TDYAIRVNGIAPGPIK------DTAGVSKLAPEEI 217
++V + PGP + + V L+P E+
Sbjct: 176 -GTGVKVTAVCPGPTRTEFFDAKGSDVYLLSPGEL 209
|
Length = 265 |
| >gnl|CDD|181508 PRK08628, PRK08628, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 88.9 bits (221), Expect = 3e-21
Identities = 67/197 (34%), Positives = 90/197 (45%), Gaps = 24/197 (12%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
LK KV ++TGG SGIG ISL+L + GA I GR A L +L A ++ D
Sbjct: 5 LKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDDEFA-EELRALQPRAEFVQVD 63
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
+ VE T+ FG++D LVN A N V E F +E + + ++M H
Sbjct: 64 LTDDAQCRDAVEQTVAKFGRIDGLVNNAGVNDGVGLEA-GREAFVASLERNLIHYYVMAH 122
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVS---AAKAAVDSITRSLALE 186
L +LK S G I+NIS+ TA Q S AAK A ++TR E
Sbjct: 123 YCLPHLKA---------SRGAIVNISSK---TALTGQGGTSGYAAAKGAQLALTR----E 166
Query: 187 WGTD---YAIRVNGIAP 200
W +RVN + P
Sbjct: 167 WAVALAKDGVRVNAVIP 183
|
Length = 258 |
| >gnl|CDD|181668 PRK09135, PRK09135, pteridine reductase; Provisional | Back alignment and domain information |
|---|
Score = 88.4 bits (220), Expect = 4e-21
Identities = 73/246 (29%), Positives = 109/246 (44%), Gaps = 28/246 (11%)
Query: 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK-TVLRSAVAALHSL-GIPAIGLEG 68
KVAL+TGG IG I+ L G +AI R + A L++L A L+
Sbjct: 5 SAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQA 64
Query: 69 DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
D+ + +V + + FG+LD LVN A+ + P ++ + + + F +
Sbjct: 65 DLLDPDALPELVAACVAAFGRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLS 124
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATW----YQIHVSAAKAAVDSITRSLA 184
A L+K G I+NI +H A Y ++ AAKAA++ +TRSLA
Sbjct: 125 QAAAPQLRK---------QRGAIVNI-TDIH--AERPLKGYPVY-CAAKAALEMLTRSLA 171
Query: 185 LEWGTDYAIRVNGIAPGPI---KDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAAL 241
LE + +RVN +APG I +D EE R + G DIA A
Sbjct: 172 LELAPE--VRVNAVAPGAILWPED----GNSFDEEARQAILARTPLKRIGTPEDIAEAVR 225
Query: 242 YLASDA 247
+L +DA
Sbjct: 226 FLLADA 231
|
Length = 249 |
| >gnl|CDD|181225 PRK08085, PRK08085, gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 88.7 bits (220), Expect = 4e-21
Identities = 68/242 (28%), Positives = 108/242 (44%), Gaps = 17/242 (7%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L GK L+TG GIGF ++ L ++GA I I AVA L GI A +
Sbjct: 7 LAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFN 66
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
V +++ +E G +D+L+N A P + + VI ++ F++
Sbjct: 67 VTHKQEVEAAIEHIEKDIGPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQ 126
Query: 130 EALKYLKKGGRGQASSSSGGIIINI----SATLHYTATWYQIHVSAAKAAVDSITRSLAL 185
+Y+ K G+ IINI S T T Y +A+K AV +TR + +
Sbjct: 127 AVARYMVKRQAGK--------IINICSMQSELGRDTITPY----AASKGAVKMLTRGMCV 174
Query: 186 EWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245
E + I+VNGIAPG K + + E + A ++G+ ++ AA++L+S
Sbjct: 175 ELAR-HNIQVNGIAPGYFKTEMTKALVEDEAFTAWLCKRTPAARWGDPQELIGAAVFLSS 233
Query: 246 DA 247
A
Sbjct: 234 KA 235
|
Length = 254 |
| >gnl|CDD|180411 PRK06123, PRK06123, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 87.9 bits (218), Expect = 6e-21
Identities = 72/242 (29%), Positives = 111/242 (45%), Gaps = 20/242 (8%)
Query: 13 KVALLTGGGSGIGFEISLQLGKHGAAIAI-MGRRKTVLRSAVAALHSLGIPAIGLEGDVR 71
KV ++TG GIG +L + G A+ + R + + V A+ G A+ + DV
Sbjct: 3 KVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVA 62
Query: 72 KREDAVRVVESTINHFGKLDILVNAAAGNFLVPA---EDLSPNGFRTVIEIDSVGTFIMC 128
D +R+ E+ G+LD LVN A L E + + + VG+F+
Sbjct: 63 DEADVLRLFEAVDRELGRLDALVNNAG--ILEAQMRLEQMDAARLTRIFATNVVGSFLCA 120
Query: 129 HEALKYL--KKGGRGQASSSSGGIIINISATL-HYTATWYQIHVSAAKAAVDSITRSLAL 185
EA+K + + GGR GG I+N+S+ + I +A+K A+D++T LA
Sbjct: 121 REAVKRMSTRHGGR-------GGAIVNVSSMAARLGSPGEYIDYAASKGAIDTMTIGLAK 173
Query: 186 EWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEI-RSKATDYMAAYKFGEKWDIAMAALYLA 244
E + IRVN + PG I S P + R KA M + G ++A A L+L
Sbjct: 174 EVAAE-GIRVNAVRPGVIYTEIHASGGEPGRVDRVKAGIPMG--RGGTAEEVARAILWLL 230
Query: 245 SD 246
SD
Sbjct: 231 SD 232
|
Length = 248 |
| >gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 90.3 bits (224), Expect = 1e-20
Identities = 62/238 (26%), Positives = 101/238 (42%), Gaps = 16/238 (6%)
Query: 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVR 71
+V +TGG GIG ++ + G + I+ R A +LG + ++ D+
Sbjct: 269 PRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDA---EGAKKLAEALGDEHLSVQADIT 325
Query: 72 KREDAVRVVESTINHFGKLDILVN-AAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHE 130
+G+LD+LVN A P+ + S F V +++ G F
Sbjct: 326 DEAAVESAFAQIQARWGRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARA 385
Query: 131 ALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTD 190
A + S GG+I+N+ + A + A+KAAV ++RSLA EW
Sbjct: 386 AAR----------LMSQGGVIVNLGSIASLLALPPRNAYCASKAAVTMLSRSLACEWAP- 434
Query: 191 YAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAY-KFGEKWDIAMAALYLASDA 247
IRVN +APG I+ A ++ A + + G+ ++A A +LAS A
Sbjct: 435 AGIRVNTVAPGYIETPAVLALKASGRADFDSIRRRIPLGRLGDPEEVAEAIAFLASPA 492
|
Length = 520 |
| >gnl|CDD|236040 PRK07523, PRK07523, gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 87.5 bits (217), Expect = 1e-20
Identities = 64/238 (26%), Positives = 110/238 (46%), Gaps = 9/238 (3%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L G+ AL+TG GIG+ ++ L + GA + + GR L +A +L G+ A L D
Sbjct: 8 LTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFD 67
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
V + +++ G +DILVN A F P ED + F ++ + F +
Sbjct: 68 VTDHDAVRAAIDAFEAEIGPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQ 127
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
+++ G G+ IINI++ A +A K AV ++T+ +A +W
Sbjct: 128 AVARHMIARGAGK--------IINIASVQSALARPGIAPYTATKGAVGNLTKGMATDWAK 179
Query: 190 DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247
+ ++ N IAPG + +A E + A ++G+ ++ A ++LASDA
Sbjct: 180 -HGLQCNAIAPGYFDTPLNAALVADPEFSAWLEKRTPAGRWGKVEELVGACVFLASDA 236
|
Length = 255 |
| >gnl|CDD|187621 cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH), classical (c) SDR | Back alignment and domain information |
|---|
Score = 87.7 bits (217), Expect = 1e-20
Identities = 61/192 (31%), Positives = 87/192 (45%), Gaps = 11/192 (5%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L GK AL+TG GIG + + GA +AI L +A A +G A + D
Sbjct: 1 LDGKTALITGSARGIGRAFAQAYVREGARVAIADIN---LEAARATAAEIGPAACAISLD 57
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
V + R V + ++ +G +DILVN AA L P D++ + + I+ GT M
Sbjct: 58 VTDQASIDRCVAALVDRWGSIDILVNNAALFDLAPIVDITRESYDRLFAINVSGTLFMMQ 117
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
+ + GR GG IIN+++ A KAAV S+T+S L
Sbjct: 118 AVARAMIAQGR-------GGKIINMASQAGRRGEALVGVYCATKAAVISLTQSAGLNL-I 169
Query: 190 DYAIRVNGIAPG 201
+ I VN IAPG
Sbjct: 170 RHGINVNAIAPG 181
|
This bacterial subgroup includes Rhodobacter sphaeroides SDH, and other SDHs. SDH preferentially interconverts D-sorbitol (D-glucitol) and D-fructose, but also interconverts L-iditol/L-sorbose and galactitol/D-tagatose. SDH is NAD-dependent and is a dimeric member of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 254 |
| >gnl|CDD|180773 PRK06949, PRK06949, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 87.5 bits (217), Expect = 1e-20
Identities = 76/241 (31%), Positives = 114/241 (47%), Gaps = 4/241 (1%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L+GKVAL+TG SG+G + L + GA + + RR L+ A + + G A + D
Sbjct: 7 LEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLD 66
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
V + V G +DILVN + + D++P F V + ++ G F +
Sbjct: 67 VTDYQSIKAAVAHAETEAGTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQ 126
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHV-SAAKAAVDSITRSLALEWG 188
E K + +G ++ GG IINI A++ QI + +KAAV +TR++ALEWG
Sbjct: 127 EVAKRMIARAKGAGNTKPGGRIINI-ASVAGLRVLPQIGLYCMSKAAVVHMTRAMALEWG 185
Query: 189 TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAG 248
+ I VN I PG I DT E K + + G+ D+ L LA+D
Sbjct: 186 R-HGINVNAICPGYI-DTEINHHHWETEQGQKLVSMLPRKRVGKPEDLDGLLLLLAADES 243
Query: 249 Q 249
Q
Sbjct: 244 Q 244
|
Length = 258 |
| >gnl|CDD|180817 PRK07060, PRK07060, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 87.1 bits (216), Expect = 1e-20
Identities = 66/238 (27%), Positives = 100/238 (42%), Gaps = 21/238 (8%)
Query: 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG--IPAIGLEGD 69
GK L+TG SGIG ++ L + GA + R AAL L L D
Sbjct: 9 GKSVLVTGASSGIGRACAVALAQRGARVVAAAR-------NAAALDRLAGETGCEPLRLD 61
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
V + A+R + G D LVN A L A D++ GF V+ +++ G ++
Sbjct: 62 V-GDDAAIRAALAA---AGAFDGLVNCAGIASLESALDMTAEGFDRVMAVNARGAALVAR 117
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
R ++ GG I+N+S+ + A+KAA+D+ITR L +E G
Sbjct: 118 HV-------ARAMIAAGRGGSIVNVSSQAALVGLPDHLAYCASKAALDAITRVLCVELG- 169
Query: 190 DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247
+ IRVN + P + + + +F E D+A L+L SDA
Sbjct: 170 PHGIRVNSVNPTVTLTPMAAEAWSDPQKSGPMLAAIPLGRFAEVDDVAAPILFLLSDA 227
|
Length = 245 |
| >gnl|CDD|222222 pfam13561, adh_short_C2, Enoyl-(Acyl carrier protein) reductase | Back alignment and domain information |
|---|
Score = 86.9 bits (216), Expect = 1e-20
Identities = 63/241 (26%), Positives = 94/241 (39%), Gaps = 38/241 (15%)
Query: 22 SGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVE 81
+ I + I+ + GA + + + AV L +PA + DV ED + E
Sbjct: 6 NSIAWAIAKAAAEEGAEVVLTTWPPALRMGAVDELAKE-LPADVIPLDVTSDEDIDELFE 64
Query: 82 STINHFGKLDILVNAAA----GNFLVPAEDLSPNGFRTVIEIDSVGTFI-MCHEALKYLK 136
GK+D LV++ A P D S GF ++I S +FI + A +
Sbjct: 65 KVKEDGGKIDFLVHSIAMSPEIRKGKPYLDTSREGFLKALDI-SAYSFISLAKAAKPLMN 123
Query: 137 KGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVN 196
+GG A S + AKAA++S+ R LA E G IRVN
Sbjct: 124 EGGSIVALSYIAAE----------RVFPGYGGMGVAKAALESLARYLAYELG-RKGIRVN 172
Query: 197 GIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKW----------DIAMAALYLASD 246
I+ GP K TAG S + ++ E+ ++A AA +L SD
Sbjct: 173 TISAGPTKTTAG----------SGIGGFDKMVEYAEEMAPLGRNASAEEVANAAAFLLSD 222
Query: 247 A 247
Sbjct: 223 L 223
|
Length = 239 |
| >gnl|CDD|226674 COG4221, COG4221, Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] | Back alignment and domain information |
|---|
Score = 86.9 bits (216), Expect = 1e-20
Identities = 56/198 (28%), Positives = 88/198 (44%), Gaps = 13/198 (6%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
LKGKVAL+TG SGIG + L + GA + + RR+ L + + + A+ L D
Sbjct: 4 LKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGA--GAALALALD 61
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
V R +E+ FG++DILVN A P ++ + + +I+ + G
Sbjct: 62 VTDRAAVEAAIEALPEEFGRIDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTR 121
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATL-HYTATWYQIHVSAAKAAVDSITRSLALEWG 188
L + + G IIN+ + Y ++ A KAAV + + L E
Sbjct: 122 AVLPGMVERKSGH--------IINLGSIAGRYPYPGGAVY-GATKAAVRAFSLGLRQELA 172
Query: 189 TDYAIRVNGIAPGPIKDT 206
IRV I+PG ++ T
Sbjct: 173 -GTGIRVTVISPGLVETT 189
|
Length = 246 |
| >gnl|CDD|187615 cd05357, PR_SDR_c, pteridine reductase (PR), classical (c) SDRs | Back alignment and domain information |
|---|
Score = 86.6 bits (215), Expect = 1e-20
Identities = 57/235 (24%), Positives = 93/235 (39%), Gaps = 15/235 (6%)
Query: 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR-KTVLRSAVAALHSLGIPAIGLEGDVR 71
VAL+TG IG I+ L G + + R + + L++L A+ ++ D+
Sbjct: 1 AVALVTGAAKRIGRAIAEALAAEGYRVVVHYNRSEAEAQRLKDELNALRNSAVLVQADLS 60
Query: 72 KREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEA 131
+V + FG+ D+LVN A+ + P S + + + I+ +++
Sbjct: 61 DFAACADLVAAAFRAFGRCDVLVNNASAFYPTPLGQGSEDAWAELFGINLKAPYLLIQAF 120
Query: 132 LKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDY 191
+ L G IINI + +KAA++ +TRS ALE +
Sbjct: 121 ARRLAGSRNGS--------IINIIDAMTDRPLTGYFAYCMSKAALEGLTRSAALELAPN- 171
Query: 192 AIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246
IRVNGIAPG I + E K +IA A ++L
Sbjct: 172 -IRVNGIAPGLILLPEDMDAEYRENALRKVPLKRR----PSAEEIADAVIFLLDS 221
|
Pteridine reductases (PRs), members of the SDR family, catalyzes the NAD-dependent reduction of folic acid, dihydrofolate and related compounds. In Leishmania, pteridine reductase (PTR1) acts to circumvent the anti-protozoan drugs that attack dihydrofolate reductase activity. Proteins in this subgroup have an N-terminal NAD-binding motif and a YxxxK active site motif, but have an Asp instead of the usual upstream catalytic Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 234 |
| >gnl|CDD|187643 cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine reductase (KDSR) and related proteins, classical (c) SDR | Back alignment and domain information |
|---|
Score = 86.9 bits (216), Expect = 1e-20
Identities = 53/208 (25%), Positives = 90/208 (43%), Gaps = 26/208 (12%)
Query: 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPA----IGLE 67
GK L+TGG SGIG ++ +L K GA + I+ R ++ L AV + + + +
Sbjct: 1 GKHVLITGGSSGIGKALAKELVKEGANVIIVARSESKLEEAVEEIEAEANASGQKVSYIS 60
Query: 68 GDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIM 127
D+ E+ + + G D++VN A + EDL+ F ++++ G+ +
Sbjct: 61 ADLSDYEEVEQAFAQAVEKGGPPDLVVNCAGISIPGLFEDLTAEEFERGMDVNYFGSLNV 120
Query: 128 CHEALKYLKKGGRGQASSSSGGIIINISATL------HYTATWYQIHVSAAKAAVDSITR 181
H L +K+ G I+ +S+ Y+A Y +K A+ +
Sbjct: 121 AHAVLPLMKEQRPGH--------IVFVSSQAALVGIYGYSA--Y----CPSKFALRGLAE 166
Query: 182 SLALEWGTDYAIRVNGIAPGPIKDTAGV 209
SL E Y IRV+ + P DT G
Sbjct: 167 SLRQEL-KPYNIRVSVVYPPDT-DTPGF 192
|
These proteins include members identified as KDSR, ribitol type dehydrogenase, and others. The group shows strong conservation of the active site tetrad and glycine rich NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 239 |
| >gnl|CDD|131468 TIGR02415, 23BDH, acetoin reductases | Back alignment and domain information |
|---|
Score = 86.7 bits (215), Expect = 2e-20
Identities = 61/244 (25%), Positives = 103/244 (42%), Gaps = 17/244 (6%)
Query: 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK 72
KVAL+TGG GIG I+ +L K G A+A+ + + ++ G A+ + DV
Sbjct: 1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSD 60
Query: 73 REDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEAL 132
++ ++ FG D++VN A + P +++ + V ++ G A
Sbjct: 61 KDQVFSAIDQAAEKFGGFDVMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAA 120
Query: 133 KYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYA 192
+ KK G GG IIN ++ + S+ K AV +T++ A E
Sbjct: 121 RQFKKQG-------HGGKIINAASIAGHEGNPILSAYSSTKFAVRGLTQTAAQELAPKG- 172
Query: 193 IRVNGIAPGPIKDT------AGVSKLAPEEIRSKATDYMAAYKFG---EKWDIAMAALYL 243
I VN PG +K S++A + I ++ + G E D+A +L
Sbjct: 173 ITVNAYCPGIVKTPMWEEIDEETSEIAGKPIGEGFEEFSSEIALGRPSEPEDVAGLVSFL 232
Query: 244 ASDA 247
AS+
Sbjct: 233 ASED 236
|
One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PMID:11577733) [Energy metabolism, Fermentation]. Length = 254 |
| >gnl|CDD|180440 PRK06172, PRK06172, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 86.0 bits (213), Expect = 3e-20
Identities = 66/241 (27%), Positives = 105/241 (43%), Gaps = 13/241 (5%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
GKVAL+TGG +GIG +L + GA + + R VA + G A+ + D
Sbjct: 5 FSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACD 64
Query: 70 VRKREDAVRVVESTINHFGKLDILV-NAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFI-M 127
V + + +VE TI +G+LD NA + S F ++ ++ G ++ M
Sbjct: 65 VTRDAEVKALVEQTIAAYGRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCM 124
Query: 128 CHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEW 187
++ L +G GG I+N ++ A +A+K AV +T+S A+E+
Sbjct: 125 KYQIPLMLAQG---------GGAIVNTASVAGLGAAPKMSIYAASKHAVIGLTKSAAIEY 175
Query: 188 GTDYAIRVNGIAPGPIK-DTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246
IRVN + P I D + A A + G+ ++A A LYL SD
Sbjct: 176 AKK-GIRVNAVCPAVIDTDMFRRAYEADPRKAEFAAAMHPVGRIGKVEEVASAVLYLCSD 234
Query: 247 A 247
Sbjct: 235 G 235
|
Length = 253 |
| >gnl|CDD|237188 PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 85.8 bits (213), Expect = 4e-20
Identities = 62/242 (25%), Positives = 96/242 (39%), Gaps = 19/242 (7%)
Query: 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT-VLRSAVAALHSLGIPAIGLEGDVR 71
VAL+TGG GIG I+ L G +AI R L + L +LG+ I DV
Sbjct: 3 PVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVA 62
Query: 72 KREDAVRVVESTINHFGKLDILVNAAA------GNFLVPAEDLSPNGFRTVIEIDSVGTF 125
++++ +G++D LVN A G+ L DL+P F V+ I+ G F
Sbjct: 63 DLSAHEAMLDAAQAAWGRIDCLVNNAGVGVKVRGDLL----DLTPESFDRVLAINLRGPF 118
Query: 126 IMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLAL 185
+ K + + I+ +S+ + + +KA + + A
Sbjct: 119 FLTQAVAKRMLAQPEPEELPH--RSIVFVSSVNAIMVSPNRGEYCISKAGLSMAAQLFAA 176
Query: 186 EWGTDYAIRVNGIAPGPIKD--TAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYL 243
+ I V + PG IK TA V+ I ++GE D+A A L
Sbjct: 177 RLA-EEGIGVYEVRPGLIKTDMTAPVTAKYDALIAKGLV---PMPRWGEPEDVARAVAAL 232
Query: 244 AS 245
AS
Sbjct: 233 AS 234
|
Length = 256 |
| >gnl|CDD|187634 cd08929, SDR_c4, classical (c) SDR, subgroup 4 | Back alignment and domain information |
|---|
Score = 85.3 bits (211), Expect = 5e-20
Identities = 64/211 (30%), Positives = 96/211 (45%), Gaps = 18/211 (8%)
Query: 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK 72
K AL+TG GIG + L G + I R + L +A A +GL GDVR
Sbjct: 1 KAALVTGASRGIGEATARLLHAEGYRVGICARDEARLAAAAAQE---LEGVLGLAGDVRD 57
Query: 73 REDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEAL 132
D R V++ FG LD LVN A + P E+L+P +R V++ + G F H+A
Sbjct: 58 EADVRRAVDAMEEAFGGLDALVNNAGVGVMKPVEELTPEEWRLVLDTNLTGAFYCIHKAA 117
Query: 133 KYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYA 192
L + G GG I+N+ + A +A+K + ++ + L+ +
Sbjct: 118 PALLRRG--------GGTIVNVGSLAGKNAFKGGAAYNASKFGLLGLSEAAMLDL-REAN 168
Query: 193 IRVNGIAPGPI-KDTAGVS-----KLAPEEI 217
IRV + PG + AG KLAPE++
Sbjct: 169 IRVVNVMPGSVDTGFAGSPEGQAWKLAPEDV 199
|
This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 226 |
| >gnl|CDD|187629 cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydrogenase type 10 (HSD10)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 85.0 bits (211), Expect = 7e-20
Identities = 62/222 (27%), Positives = 94/222 (42%), Gaps = 29/222 (13%)
Query: 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDV 70
KG VA++TGG SG+G +L GA + I+ S + LG + DV
Sbjct: 1 KGLVAVVTGGASGLGLATVERLLAQGAKVVILDLPN----SPGETVAKLGDNCRFVPVDV 56
Query: 71 RKREDAVRVVESTINHFGKLDILVNAAA-----------GNFLVPAEDLSPNGFRTVIEI 119
+D + FG+LDI+VN A G E F+ VI +
Sbjct: 57 TSEKDVKAALALAKAKFGRLDIVVNCAGIAVAAKTYNKKGQQPHSLEL-----FQRVINV 111
Query: 120 DSVGTFIMCHEALKYLKKGGRGQASSSSG--GIIINISATLHYTATWYQIHVSAAKAAVD 177
+ +GTF + A + K G G+IIN ++ + Q SA+K +
Sbjct: 112 NLIGTFNVIRLAAGAMGK----NEPDQGGERGVIINTASVAAFEGQIGQAAYSASKGGIV 167
Query: 178 SITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRS 219
+T +A + IRV IAPG + DT ++ L PE++R
Sbjct: 168 GMTLPIARDLAPQ-GIRVVTIAPG-LFDTPLLAGL-PEKVRD 206
|
HSD10, also known as amyloid-peptide-binding alcohol dehydrogenase (ABAD), was previously identified as a L-3-hydroxyacyl-CoA dehydrogenase, HADH2. In fatty acid metabolism, HADH2 catalyzes the third step of beta-oxidation, the conversion of a hydroxyl to a keto group in the NAD-dependent oxidation of L-3-hydroxyacyl CoA. In addition to alcohol dehydrogenase and HADH2 activites, HSD10 has steroid dehydrogenase activity. Although the mechanism is unclear, HSD10 is implicated in the formation of amyloid beta-petide in the brain (which is linked to the development of Alzheimer's disease). Although HSD10 is normally concentrated in the mitochondria, in the presence of amyloid beta-peptide it translocates into the plasma membrane, where it's action may generate cytotoxic aldehydes and may lower estrogen levels through its use of 17-beta-estradiol as a substrate. HSD10 is a member of the SRD family, but differs from other SDRs by the presence of two insertions of unknown function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 252 |
| >gnl|CDD|180371 PRK06057, PRK06057, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 84.8 bits (210), Expect = 1e-19
Identities = 65/245 (26%), Positives = 119/245 (48%), Gaps = 26/245 (10%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L G+VA++TGGGSGIG + +L GA + + ++A + L +P D
Sbjct: 5 LAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVGGLFVPT-----D 59
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLS-----PNGFRTVIEIDSVGT 124
V + + ++ +G +DI N A + P ED S + ++ V +++
Sbjct: 60 VTDEDAVNALFDTAAETYGSVDIAFNNAG---ISPPEDDSILNTGLDAWQRVQDVNLTSV 116
Query: 125 FIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLA 184
++ C AL ++ + G+G +++ + + SAT QI +A+K V +++R L
Sbjct: 117 YLCCKAALPHMVRQGKGSIINTASFVAVMGSAT-------SQISYTASKGGVLAMSRELG 169
Query: 185 LEWGTDYAIRVNGIAPGPIKDTAGVSKL---APEEIRSKATDYMAAYKFGEKWDIAMAAL 241
+++ IRVN + PGP+ +T + +L PE + ++ +F E +IA A
Sbjct: 170 VQFARQ-GIRVNALCPGPV-NTPLLQELFAKDPERAARRLV-HVPMGRFAEPEEIAAAVA 226
Query: 242 YLASD 246
+LASD
Sbjct: 227 FLASD 231
|
Length = 255 |
| >gnl|CDD|235693 PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 84.4 bits (209), Expect = 1e-19
Identities = 62/202 (30%), Positives = 93/202 (46%), Gaps = 13/202 (6%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAI-MGRRKTVLRSAVAALHSLGIPAIGLEG 68
LK KV ++TG G GIG I+++L K G+ + + +R + + + G IG+
Sbjct: 4 LKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLA 63
Query: 69 DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
DV RE + ++TI+ +G DILVN A P ++ I D
Sbjct: 64 DVSTREGCETLAKATIDRYGVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCS 123
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
E K +++GG +S GI +++ A KAAV ++T+ LALE
Sbjct: 124 QELAKEMREGGAIVNIASVAGIRPAYGLSIY----------GAMKAAVINLTKYLALELA 173
Query: 189 TDYAIRVNGIAPGPIKDTAGVS 210
IRVN IAPG +K G S
Sbjct: 174 P--KIRVNAIAPGFVKTKLGES 193
|
Length = 252 |
| >gnl|CDD|180818 PRK07062, PRK07062, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 84.7 bits (210), Expect = 1e-19
Identities = 55/194 (28%), Positives = 87/194 (44%), Gaps = 11/194 (5%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPA--IGLE 67
L+G+VA++TGG SGIG L + GA++AI GR + L SA A L A +
Sbjct: 6 LEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAAR 65
Query: 68 GDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIM 127
DV D + FG +D+LVN A + D + + +R +E+
Sbjct: 66 CDVLDEADVAAFAAAVEARFGGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINP 125
Query: 128 CHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEW 187
L L+ S+ I+ +++ L + + SAA+A + ++ +SLA E
Sbjct: 126 TRAFLPLLRA--------SAAASIVCVNSLLALQPEPHMVATSAARAGLLNLVKSLATEL 177
Query: 188 GTDYAIRVNGIAPG 201
+RVN I G
Sbjct: 178 -APKGVRVNSILLG 190
|
Length = 265 |
| >gnl|CDD|187609 cd05351, XR_like_SDR_c, xylulose reductase-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 83.7 bits (207), Expect = 2e-19
Identities = 62/237 (26%), Positives = 98/237 (41%), Gaps = 16/237 (6%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
GK AL+TG G GIG L K GA + + R + L S V + + D
Sbjct: 5 FAGKRALVTGAGKGIGRATVKALAKAGARVVAVSRTQADLDSLVRECPGI----EPVCVD 60
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
+ + E + G +D+LVN AA L P +++ F +++ +
Sbjct: 61 LSDWD----ATEEALGSVGPVDLLVNNAAVAILQPFLEVTKEAFDRSFDVNVRAVIHVSQ 116
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
+ + G G I+N+S+ A + KAA+D +T+ +ALE G
Sbjct: 117 IVARGMIARG-------VPGSIVNVSSQASQRALTNHTVYCSTKAALDMLTKVMALELGP 169
Query: 190 DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246
+ IRVN + P + G + E K + + KF E D+ A L+L SD
Sbjct: 170 -HKIRVNSVNPTVVMTDMGRDNWSDPEKAKKMLNRIPLGKFAEVEDVVNAILFLLSD 225
|
Members of this subgroup include proteins identified as L-xylulose reductase (XR) and carbonyl reductase; they are members of the SDR family. XR, catalyzes the NADP-dependent reduction of L-xyulose and other sugars. Tetrameric mouse carbonyl reductase is involved in the metabolism of biogenic and xenobiotic carbonyl compounds. This subgroup also includes tetrameric chicken liver D-erythrulose reductase, which catalyzes the reduction of D-erythrulose to D-threitol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 244 |
| >gnl|CDD|187630 cd05372, ENR_SDR, Enoyl acyl carrier protein (ACP) reductase (ENR), divergent SDR | Back alignment and domain information |
|---|
Score = 83.8 bits (208), Expect = 2e-19
Identities = 68/259 (26%), Positives = 103/259 (39%), Gaps = 53/259 (20%)
Query: 12 GKVALLTGGGS--GIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
GK L+TG + I + I+ L + GA +A + + + + LG A+ L D
Sbjct: 1 GKRILITGIANDRSIAWGIAKALHEAGAELAFTYQPEALRKRVEKLAERLGESALVLPCD 60
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAA--------GNFLVPAEDLSPNGFRTVIEIDS 121
V E+ + +GKLD LV++ A G FL D S GF ++I +
Sbjct: 61 VSNDEEIKELFAEVKKDWGKLDGLVHSIAFAPKVQLKGPFL----DTSRKGFLKALDISA 116
Query: 122 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH----VSAAKAAVD 177
+ AL + G G I+ TL Y + + + AKAA++
Sbjct: 117 YSLVSLAKAALPIMNPG---------GSIV-----TLSYLGSERVVPGYNVMGVAKAALE 162
Query: 178 SITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKW--- 234
S R LA E G IRVN I+ GPIK A S T + ++ E+
Sbjct: 163 SSVRYLAYELG-RKGIRVNAISAGPIKTLAA----------SGITGFDKMLEYSEQRAPL 211
Query: 235 -------DIAMAALYLASD 246
++ A +L SD
Sbjct: 212 GRNVTAEEVGNTAAFLLSD 230
|
This bacterial subgroup of ENRs includes Escherichia coli ENR. ENR catalyzes the NAD(P)H-dependent reduction of enoyl-ACP in the last step of fatty acid biosynthesis. De novo fatty acid biosynthesis is catalyzed by the fatty acid synthetase complex, through the serial addition of 2-carbon subunits. In bacteria and plants,ENR catalyzes one of six synthetic steps in this process. Oilseed rape ENR, and also apparently the NADH-specific form of Escherichia coli ENR, is tetrameric. Although similar to the classical SDRs, this group does not have the canonical catalytic tetrad, nor does it have the typical Gly-rich NAD-binding pattern. Such so-called divergent SDRs have a GXXXXXSXA NAD-binding motif and a YXXMXXXK (or YXXXMXXXK) active site motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250 |
| >gnl|CDD|177895 PLN02253, PLN02253, xanthoxin dehydrogenase | Back alignment and domain information |
|---|
Score = 83.7 bits (207), Expect = 3e-19
Identities = 83/265 (31%), Positives = 126/265 (47%), Gaps = 41/265 (15%)
Query: 3 SPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIP 62
S L GKVAL+TGG +GIG I KHGA + I+ + + ++ +L G P
Sbjct: 9 SSLPSQRLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLG--GEP 66
Query: 63 AIG-LEGDVRKREDAVRVVESTINHFGKLDILVNAA--AGNFLVPAEDLSPNGFRTVIEI 119
+ DV +D R V+ T++ FG LDI+VN A G ++ + F V ++
Sbjct: 67 NVCFFHCDVTVEDDVSRAVDFTVDKFGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDV 126
Query: 120 DSVGTFI-MCHEA--LKYLKKG---GRGQASSSSGGIIINISATLHYTATWYQIHVSAAK 173
+ G F+ M H A + LKKG +S+ GG+ YT + K
Sbjct: 127 NVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAIGGL-----GPHAYTGS---------K 172
Query: 174 AAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK-FGE 232
AV +TRS+A E G + IRVN ++P + ++ L PE+ R++ D +A ++ F
Sbjct: 173 HAVLGLTRSVAAELG-KHGIRVNCVSPYAVPTALALAHL-PEDERTE--DALAGFRAFAG 228
Query: 233 KW-----------DIAMAALYLASD 246
K D+A A L+LASD
Sbjct: 229 KNANLKGVELTVDDVANAVLFLASD 253
|
Length = 280 |
| >gnl|CDD|187591 cd05330, cyclohexanol_reductase_SDR_c, cyclohexanol reductases, including levodione reductase, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 83.3 bits (206), Expect = 4e-19
Identities = 74/249 (29%), Positives = 118/249 (47%), Gaps = 22/249 (8%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGL--- 66
K KV L+TGGGSG+G +++L K GA ++++ + L +A AAL + P +
Sbjct: 1 FKDKVVLITGGGSGLGLATAVRLAKEGAKLSLVDLNEEGLEAAKAALLEI-APDAEVLLI 59
Query: 67 EGDVRKREDAVRVVESTINHFGKLDILV-NAAAGNFLVPAEDLSPNGFRTVIEIDSVGTF 125
+ DV V++T+ FG++D NA ED + F V+ I+ G F
Sbjct: 60 KADVSDEAQVEAYVDATVEQFGRIDGFFNNAGIEGKQNLTEDFGADEFDKVVSINLRGVF 119
Query: 126 IMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLAL 185
+ LK +++ G G I+N ++ Q +AAK V +TR+ A+
Sbjct: 120 YGLEKVLKVMREQGSGM--------IVNTASVGGIRGVGNQSGYAAAKHGVVGLTRNSAV 171
Query: 186 EWGTDYAIRVNGIAPGPIKDTAGVS----KLAPEEIRSKATDYMA---AYKFGEKWDIAM 238
E+G Y IR+N IAPG I T V +L PE ++++ +FGE ++A
Sbjct: 172 EYG-QYGIRINAIAPGAIL-TPMVEGSLKQLGPENPEEAGEEFVSVNPMKRFGEPEEVAA 229
Query: 239 AALYLASDA 247
+L SD
Sbjct: 230 VVAFLLSDD 238
|
Cyloclohexanol reductases,including (6R)-2,2,6-trimethyl-1,4-cyclohexanedione (levodione) reductase of Corynebacterium aquaticum, catalyze the reversible oxidoreduction of hydroxycyclohexanone derivatives. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257 |
| >gnl|CDD|215720 pfam00106, adh_short, short chain dehydrogenase | Back alignment and domain information |
|---|
Score = 81.1 bits (201), Expect = 4e-19
Identities = 40/181 (22%), Positives = 65/181 (35%), Gaps = 21/181 (11%)
Query: 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIM-GRRKTV--LRSAVAALHSLGIPAIGLEGD 69
L+TGG G+G ++ L GA ++ RR VA L +LG D
Sbjct: 1 GTVLITGGTGGLGLALARWLAAEGARHLVLVSRRGPAPGAAELVAELEALGAEVTVAACD 60
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
V R+ ++ + G LD +V+ A P E+L+P F V+ G + +
Sbjct: 61 VADRDALAALLAALPAALGPLDGVVHNAGVLDDGPLEELTPERFERVLAPKVTGAWNLHE 120
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWY---QIHVSAAKAAVDSITRSLALE 186
G + S+ Q + +AA AA+D++ E
Sbjct: 121 LTRD------------LDLGAFVLFSSV---AGVLGSPGQANYAAANAALDALAEHRRAE 165
Query: 187 W 187
Sbjct: 166 G 166
|
This family contains a wide variety of dehydrogenases. Length = 167 |
| >gnl|CDD|171531 PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 82.6 bits (204), Expect = 6e-19
Identities = 72/242 (29%), Positives = 120/242 (49%), Gaps = 18/242 (7%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L GKVA++TG +G+G +++ L K GA I +G A + +LG + D
Sbjct: 6 LNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVA--EAPETQAQVEALGRKFHFITAD 63
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDL---SPNGFRTVIEIDSVGTFI 126
+ +++D +V + G +DIL+N A ++ +DL + VI I+ F
Sbjct: 64 LIQQKDIDSIVSQAVEVMGHIDILINNAG---IIRRQDLLEFGNKDWDDVININQKTVFF 120
Query: 127 MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALE 186
+ K K G +GG IINI++ L + +A+K+AV +TR+LA E
Sbjct: 121 LSQAVAKQFVKQG-------NGGKIINIASMLSFQGGIRVPSYTASKSAVMGLTRALATE 173
Query: 187 WGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKAT-DYMAAYKFGEKWDIAMAALYLAS 245
+ Y I VN IAPG + T + L + R++A + + A ++G D+A A++L+S
Sbjct: 174 L-SQYNINVNAIAPGYMA-TDNTAALRADTARNEAILERIPASRWGTPDDLAGPAIFLSS 231
Query: 246 DA 247
A
Sbjct: 232 SA 233
|
Length = 251 |
| >gnl|CDD|237187 PRK12743, PRK12743, oxidoreductase; Provisional | Back alignment and domain information |
|---|
Score = 82.4 bits (204), Expect = 7e-19
Identities = 60/237 (25%), Positives = 113/237 (47%), Gaps = 13/237 (5%)
Query: 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR--KTVLRSAVAALHSLGIPAIGLEGDV 70
+VA++T SGIG +L L + G I I + +A + S G+ A + D+
Sbjct: 3 QVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETA-EEVRSHGVRAEIRQLDL 61
Query: 71 RKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHE 130
+ + ++ I G++D+LVN A P D+ + +R + +D G F+
Sbjct: 62 SDLPEGAQALDKLIQRLGRIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQI 121
Query: 131 ALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTD 190
A +++ K G+ GG IINI++ +T +AAK A+ +T+++ALE +
Sbjct: 122 AARHMVKQGQ-------GGRIINITSVHEHTPLPGASAYTAAKHALGGLTKAMALEL-VE 173
Query: 191 YAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247
+ I VN +APG I ++ + +++ + + + G+ +IA +L S+
Sbjct: 174 HGILVNAVAPGAI--ATPMNGMDDSDVKPDSRPGIPLGRPGDTHEIASLVAWLCSEG 228
|
Length = 256 |
| >gnl|CDD|235794 PRK06398, PRK06398, aldose dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 82.2 bits (203), Expect = 1e-18
Identities = 63/249 (25%), Positives = 111/249 (44%), Gaps = 36/249 (14%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
LK KVA++TGG GIG + +L + G+ + ++ S + + D
Sbjct: 4 LKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKE---PSYNDVDY--------FKVD 52
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
V +E ++ ++ I+ +G++DILVN A + + + +I ++ G F+M
Sbjct: 53 VSNKEQVIKGIDYVISKYGRIDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSK 112
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
+ Y+ K G+IINI++ + T +K AV +TRS+A+
Sbjct: 113 YTIPYMLKQD--------KGVIINIASVQSFAVTRNAAAYVTSKHAVLGLTRSIAV---- 160
Query: 190 DYA--IRVNGIAPGPIKDTAGVSKLA-------PEEIRSKATDYMAAY---KFGEKWDIA 237
DYA IR + PG I T + A PE + K ++ + + G+ ++A
Sbjct: 161 DYAPTIRCVAVCPGSI-RTPLLEWAAELEVGKDPEHVERKIREWGEMHPMKRVGKPEEVA 219
Query: 238 MAALYLASD 246
+LASD
Sbjct: 220 YVVAFLASD 228
|
Length = 258 |
| >gnl|CDD|181517 PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 81.7 bits (202), Expect = 1e-18
Identities = 72/251 (28%), Positives = 110/251 (43%), Gaps = 39/251 (15%)
Query: 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK 72
+ L+TGG G+G I+ + GA + + + +A A LG AI L+ DV
Sbjct: 6 QTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSE--DAAEALADELGDRAIALQADVTD 63
Query: 73 REDAVRVVESTINHFGK-LDILVNAAAGNFLV------PAEDLSPNGFRTVIEIDSVGTF 125
RE + + HFGK + +VN A +F A+D++ F+ +E G
Sbjct: 64 REQVQAMFATATEHFGKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGAL 123
Query: 126 IMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHV------SAAKAAVDSI 179
AL +++ G G+ IINI L +Q V + AKAA+ +
Sbjct: 124 NTIQAALPGMREQGFGR--------IINIGTNL------FQNPVVPYHDYTTAKAALLGL 169
Query: 180 TRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAA----YKFGEKWD 235
TR+LA E G Y I VN ++ G ++ T S P+E+ D +AA K +
Sbjct: 170 TRNLAAELG-PYGITVNMVSGGLLRTT-DASAATPDEV----FDLIAATTPLRKVTTPQE 223
Query: 236 IAMAALYLASD 246
A A L+ AS
Sbjct: 224 FADAVLFFASP 234
|
Length = 253 |
| >gnl|CDD|187618 cd05360, SDR_c3, classical (c) SDR, subgroup 3 | Back alignment and domain information |
|---|
Score = 80.5 bits (199), Expect = 3e-18
Identities = 52/173 (30%), Positives = 79/173 (45%), Gaps = 8/173 (4%)
Query: 14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKR 73
V ++TG SGIG +L + GA + + R L + LG AI + DV
Sbjct: 2 VVVITGASSGIGRATALAFAERGAKVVLAARSAEALHELAREVRELGGEAIAVVADVADA 61
Query: 74 EDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALK 133
R ++ + FG++D VN A ED++P FR V +++ +G AL
Sbjct: 62 AQVERAADTAVERFGRIDTWVNNAGVAVFGRFEDVTPEEFRRVFDVNYLGHVYGTLAALP 121
Query: 134 YLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALE 186
+L++ G GG +IN+ + L Y + Q SA+K AV T SL E
Sbjct: 122 HLRRRG--------GGALINVGSLLGYRSAPLQAAYSASKHAVRGFTESLRAE 166
|
These proteins are members of the classical SDR family, with a canonical active site triad (and also active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 233 |
| >gnl|CDD|181305 PRK08226, PRK08226, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 80.6 bits (199), Expect = 4e-18
Identities = 56/209 (26%), Positives = 90/209 (43%), Gaps = 16/209 (7%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L GK AL+TG GIG I+ +HGA + ++ + + A L G + D
Sbjct: 4 LTGKTALITGALQGIGEGIARVFARHGANLILLDISPEIEKLA-DELCGRGHRCTAVVAD 62
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
VR ++ G++DILVN A L D+S I+I+ G + +
Sbjct: 63 VRDPASVAAAIKRAKEKEGRIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTK 122
Query: 130 EALKYLKKGGRGQ---ASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALE 186
L + G+ SS +G ++ + T + KAA+ +T+SLA+E
Sbjct: 123 AVLPEMIARKDGRIVMMSSVTGDMVADPGETAYAL----------TKAAIVGLTKSLAVE 172
Query: 187 WGTDYAIRVNGIAPGPIKDTAGVSKLAPE 215
+ IRVN I PG ++ T +A +
Sbjct: 173 YA-QSGIRVNAICPGYVR-TPMAESIARQ 199
|
Length = 263 |
| >gnl|CDD|183718 PRK12746, PRK12746, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 80.5 bits (198), Expect = 4e-18
Identities = 75/246 (30%), Positives = 113/246 (45%), Gaps = 24/246 (9%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAI-MGRRKTVLRSAVAALHSLGIPAIGLEG 68
L GKVAL+TG GIG I+++L GA +AI GR K + + S G A +E
Sbjct: 4 LDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEA 63
Query: 69 DVRKREDAVRVVESTINHF------GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV 122
D+ + ++VE N ++DILVN A E+ + F ++ ++
Sbjct: 64 DLNSIDGVKKLVEQLKNELQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIK 123
Query: 123 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISAT---LHYTATWYQIHVSAAKAAVDSI 179
F + + L L+ GR +INIS+ L +T + I +K A++++
Sbjct: 124 APFFLIQQTLPLLRAEGR----------VINISSAEVRLGFTGS---IAYGLSKGALNTM 170
Query: 180 TRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMA 239
T LA G + I VN I PG K L EIR+ AT+ + G+ DIA A
Sbjct: 171 TLPLAKHLG-ERGITVNTIMPGYTKTDINAKLLDDPEIRNFATNSSVFGRIGQVEDIADA 229
Query: 240 ALYLAS 245
+LAS
Sbjct: 230 VAFLAS 235
|
Length = 254 |
| >gnl|CDD|180439 PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 80.8 bits (200), Expect = 4e-18
Identities = 66/219 (30%), Positives = 96/219 (43%), Gaps = 34/219 (15%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGL--- 66
L+GK+ ++TGG SGIG I +L +GA + A +H
Sbjct: 7 LQGKIIIVTGGSSGIGLAIVKELLANGANVVN------------ADIHGGDGQHENYQFV 54
Query: 67 EGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF---LVPAED------LSPNGFRTVI 117
DV E+ V I FG++D LVN A N LV +D L+ F +
Sbjct: 55 PTDVSSAEEVNHTVAEIIEKFGRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMF 114
Query: 118 EIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVD 177
I+ G F+M + + K G+I+N+S+ + Q +A KAA++
Sbjct: 115 NINQKGVFLMSQAVARQMVKQH--------DGVIVNMSSEAGLEGSEGQSCYAATKAALN 166
Query: 178 SITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEE 216
S TRS A E G + IRV G+APG I + G+ EE
Sbjct: 167 SFTRSWAKELG-KHNIRVVGVAPG-ILEATGLRTPEYEE 203
|
Length = 266 |
| >gnl|CDD|132368 TIGR03325, BphB_TodD, cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase | Back alignment and domain information |
|---|
Score = 80.2 bits (198), Expect = 5e-18
Identities = 66/209 (31%), Positives = 97/209 (46%), Gaps = 20/209 (9%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
LKG+V L+TGG SG+G I + GA +A++ + L+ + A H G +G+EGD
Sbjct: 3 LKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQ-ELEAAH--GDAVVGVEGD 59
Query: 70 VRKREDAVRVVESTINHFGKLDILV-NAAAGNFLVP----AEDLSPNGFRTVIEIDSVGT 124
VR +D V + FGK+D L+ NA ++ +D F V I+ G
Sbjct: 60 VRSLDDHKEAVARCVAAFGKIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGY 119
Query: 125 FIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLA 184
+ AL L +S G +I IS Y ++ +AAK AV + + LA
Sbjct: 120 LLAVKAALPAL--------VASRGSVIFTISNAGFYPNGGGPLY-TAAKHAVVGLVKELA 170
Query: 185 LEWGTDYAIRVNGIAPGPI-KDTAGVSKL 212
E +RVNG+APG + D G L
Sbjct: 171 FELAP--YVRVNGVAPGGMSSDLRGPKSL 197
|
Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. Length = 262 |
| >gnl|CDD|187649 cd08945, PKR_SDR_c, Polyketide ketoreductase, classical (c) SDR | Back alignment and domain information |
|---|
Score = 80.3 bits (198), Expect = 6e-18
Identities = 68/243 (27%), Positives = 112/243 (46%), Gaps = 16/243 (6%)
Query: 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK 72
+VAL+TG SGIG I+ +LGK G + + R + L + V L G+ A G DVR
Sbjct: 4 EVALVTGATSGIGLAIARRLGKEGLRVFVCARGEEGLATTVKELREAGVEADGRTCDVRS 63
Query: 73 REDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEAL 132
+ +V + + +G +D+LVN A + +L+ + V+E + G F + E
Sbjct: 64 VPEIEALVAAAVARYGPIDVLVNNAGRSGGGATAELADELWLDVVETNLTGVFRVTKEV- 122
Query: 133 KYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYA 192
LK GG + + G IINI++T + SA+K V T++L LE
Sbjct: 123 --LKAGGMLERGT---GRIINIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELART-G 176
Query: 193 IRVNGIAPGPIKDT---------AGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYL 243
I VN + PG ++ A + +++ EE + T + ++ ++A YL
Sbjct: 177 ITVNAVCPGFVETPMAASVREHYADIWEVSTEEAFDRITARVPLGRYVTPEEVAGMVAYL 236
Query: 244 ASD 246
D
Sbjct: 237 IGD 239
|
Polyketide ketoreductase (KR) is a classical SDR with a characteristic NAD-binding pattern and active site tetrad. Aromatic polyketides include various aromatic compounds of pharmaceutical interest. Polyketide KR, part of the type II polyketide synthase (PKS) complex, is comprised of stand-alone domains that resemble the domains found in fatty acid synthase and multidomain type I PKS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 258 |
| >gnl|CDD|180300 PRK05875, PRK05875, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 80.6 bits (199), Expect = 6e-18
Identities = 72/245 (29%), Positives = 117/245 (47%), Gaps = 20/245 (8%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL-GIPAIGLE- 67
+ + L+TGGGSGIG ++ L GAA+ I+GR L +A + +L G A+ E
Sbjct: 5 FQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEP 64
Query: 68 GDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLV-PAEDLSPNGFRTVIEIDSVGTFI 126
DV + R V++ G+L +V+ A G+ + P + + +R ++++ GT
Sbjct: 65 ADVTDEDQVARAVDAATAWHGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMY 124
Query: 127 MCHEALKYLKKGGRGQASSSSGGIIINISATLHY-TATWYQIHVSAAKAAVDSITRSLAL 185
+ A + L +GG GG + IS+ T W+ + K+AVD + + A
Sbjct: 125 VLKHAARELVRGG--------GGSFVGISSIAASNTHRWFGAY-GVTKSAVDHLMKLAAD 175
Query: 186 EWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAY---KFGEKWDIAMAALY 242
E G + +RVN I PG I+ E+ + DY A + GE D+A A++
Sbjct: 176 ELGPSW-VRVNSIRPGLIRTDLVAPITESPELSA---DYRACTPLPRVGEVEDVANLAMF 231
Query: 243 LASDA 247
L SDA
Sbjct: 232 LLSDA 236
|
Length = 276 |
| >gnl|CDD|187642 cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase (DHB DH)-like, classical (c) SDR | Back alignment and domain information |
|---|
Score = 79.5 bits (196), Expect = 8e-18
Identities = 65/250 (26%), Positives = 105/250 (42%), Gaps = 24/250 (9%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
+GKV ++TG GIG ++ +L GA + ++ R + V +A + + G A D
Sbjct: 2 FEGKVVVVTGAAQGIGRGVAERLAGEGARVLLVDRSELVH-EVLAEILAAGDAAHVHTAD 60
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLV-PAEDLSPNGFRTVIEIDSVGTFIMC 128
+ A VV + + FG++D+L+N G P E I T C
Sbjct: 61 LETYAGAQGVVRAAVERFGRVDVLINNVGGTIWAKPYEHYEEEQIEAEIRRSLFPTLWCC 120
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
L ++ + R Q G+I+N+S+ T Y+I SAAK V+++T SLA E
Sbjct: 121 RAVLPHMLE--RQQ------GVIVNVSSIA--TRGIYRIPYSAAKGGVNALTASLAFEHA 170
Query: 189 TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAY-----------KFGEKWDIA 237
IRVN +APG + + + + ++G +
Sbjct: 171 -RDGIRVNAVAPGGTEAPPRKIPRNAAPMSEQEKVWYQRIVDQTLDSSLMGRYGTIDEQV 229
Query: 238 MAALYLASDA 247
A L+LASD
Sbjct: 230 RAILFLASDE 239
|
DHB DH (aka 1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate dehydrogenase) catalyzes the NAD-dependent conversion of 1,2-dihydroxycyclohexa-3,4-diene carboxylate to a catechol. This subgroup also contains Pseudomonas putida F1 CmtB, 2,3-dihydroxy-2,3-dihydro-p-cumate dehydrogenase, the second enzyme in the pathway for catabolism of p-cumate catabolism. This subgroup shares the glycine-rich NAD-binding motif of the classical SDRs and shares the same catalytic triad; however, the upstream Asn implicated in cofactor binding or catalysis in other SDRs is generally substituted by a Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256 |
| >gnl|CDD|131680 TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase | Back alignment and domain information |
|---|
Score = 80.7 bits (199), Expect = 2e-17
Identities = 68/254 (26%), Positives = 108/254 (42%), Gaps = 28/254 (11%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAAL---HSLGIPAIGL 66
L +VA +TGG GIG E + +L GA + + + A + G A+ L
Sbjct: 412 LARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGR-AVAL 470
Query: 67 EGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFI 126
+ DV + +G +DI+VN A P E+ + ++ ++I + G F+
Sbjct: 471 KMDVTDEQAVKAAFADVALAYGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFL 530
Query: 127 MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALE 186
+ EA + +++ G GG I+ I++ A SAAKAA + R LA E
Sbjct: 531 VAREAFRQMREQG-------LGGNIVFIASKNAVYAGKNASAYSAAKAAEAHLARCLAAE 583
Query: 187 WGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDY-MAAYKFGEKW----------- 234
G Y IRVN + P + +G+ E +A Y + A + E +
Sbjct: 584 -GGTYGIRVNTVNPDAVLQGSGI--WDGEWREERAAAYGIPADELEEHYAKRTLLKRHIF 640
Query: 235 --DIAMAALYLASD 246
DIA A +LAS
Sbjct: 641 PADIAEAVFFLASS 654
|
Length = 676 |
| >gnl|CDD|188169 TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reductase | Back alignment and domain information |
|---|
Score = 78.2 bits (193), Expect = 2e-17
Identities = 66/239 (27%), Positives = 103/239 (43%), Gaps = 16/239 (6%)
Query: 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPA---IGLEGD 69
++AL+TGG GIG I +L K G +A A A L G +EGD
Sbjct: 1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNE--ERAEAWLQEQGALGFDFRVVEGD 58
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
V E V G +D+LVN A + ++ + VI+ + F +
Sbjct: 59 VSSFESCKAAVAKVEAELGPIDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQ 118
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
+ +++ G G+ IINIS+ + Q + SAAKA + T++LA E G
Sbjct: 119 PVIDGMRERGWGR--------IINISSVNGQKGQFGQTNYSAAKAGMIGFTKALAQE-GA 169
Query: 190 DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAG 248
+ VN I+PG I T V + E++ + + + G +IA A +LAS+
Sbjct: 170 TKGVTVNTISPGYI-ATDMVMAM-REDVLNSIVAQIPVGRLGRPEEIAAAVAFLASEEA 226
|
This model represent acetoacetyl-CoA reductase, a member of the family short-chain-alcohol dehydrogenases. Note that, despite the precision implied by the enzyme name, the reaction of EC 1.1.1.36 is defined more generally as (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. Length = 242 |
| >gnl|CDD|187663 cd09762, HSDL2_SDR_c, human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs | Back alignment and domain information |
|---|
Score = 77.9 bits (192), Expect = 3e-17
Identities = 60/229 (26%), Positives = 99/229 (43%), Gaps = 22/229 (9%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT-------VLRSAVAALHSLGIP 62
L GK +TG GIG I+L+ + GA + I + + +A + + G
Sbjct: 1 LAGKTLFITGASRGIGKAIALKAARDGANVVIAAKTAEPHPKLPGTIYTAAEEIEAAGGK 60
Query: 63 AIGLEGDVRKREDAVRV-VESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS 121
A+ D+R ED VR VE + FG +DILVN A+ L D + ++ +++
Sbjct: 61 ALPCIVDIRD-EDQVRAAVEKAVEKFGGIDILVNNASAISLTGTLDTPMKRYDLMMGVNT 119
Query: 122 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHV--SAAKAAVDSI 179
GT++ L YLKK I+N+S L+ W++ H + AK +
Sbjct: 120 RGTYLCSKACLPYLKKSKNPH--------ILNLSPPLNLNPKWFKNHTAYTMAKYGMSMC 171
Query: 180 TRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEI--RSKATDYMA 226
+A E+ I VN + P TA ++ L ++ + + MA
Sbjct: 172 VLGMAEEFK-PGGIAVNALWPRTAIATAAMNMLGGVDVAACCRKPEIMA 219
|
This subgroup includes human HSDL2 and related protens. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243 |
| >gnl|CDD|182051 PRK09730, PRK09730, putative NAD(P)-binding oxidoreductase; Provisional | Back alignment and domain information |
|---|
Score = 77.6 bits (191), Expect = 3e-17
Identities = 68/239 (28%), Positives = 106/239 (44%), Gaps = 12/239 (5%)
Query: 13 KVALLTGGGSGIGFEISLQLGKHGAAIAI-MGRRKTVLRSAVAALHSLGIPAIGLEGDVR 71
+AL+TGG GIG +L L + G +A+ + + V + G A L+ D+
Sbjct: 2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADIS 61
Query: 72 KREDAVRVVESTINHFGKLDILVNAAAGNFL-VPAEDLSPNGFRTVIEIDSVGTFIMCHE 130
V + + H L LVN A F E+L+ V+ + G F+ C E
Sbjct: 62 DENQVVAMFTAIDQHDEPLAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCRE 121
Query: 131 ALKYLKKGGRGQASSSSGGIIINI-SATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
A+K + G GG I+N+ SA A + +A+K A+D++T L+LE
Sbjct: 122 AVKRMALKHGGS-----GGAIVNVSSAASRLGAPGEYVDYAASKGAIDTLTTGLSLEVAA 176
Query: 190 DYAIRVNGIAPGPIKDTAGVSKLAPEEI-RSKATDYMAAYKFGEKWDIAMAALYLASDA 247
IRVN + PG I S P + R K+ M + G+ ++A A ++L SD
Sbjct: 177 Q-GIRVNCVRPGFIYTEMHASGGEPGRVDRVKSNIPMQ--RGGQPEEVAQAIVWLLSDK 232
|
Length = 247 |
| >gnl|CDD|187599 cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 77.6 bits (191), Expect = 4e-17
Identities = 52/229 (22%), Positives = 98/229 (42%), Gaps = 17/229 (7%)
Query: 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPA---IG 65
+L ++ L+TG GIG E +L ++GA + ++GR + LR ++ G
Sbjct: 1 LLNDRIILVTGASDGIGREAALTYARYGATVILLGRNEEKLRQVADHINEEGGRQPQWFI 60
Query: 66 LEGDVRKREDAVRVVESTINHFGKLD-ILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGT 124
L+ E+ ++ + ++ +LD +L NA + P + +P ++ V +++ T
Sbjct: 61 LDLLTCTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPLSEQNPQVWQDVXQVNVNAT 120
Query: 125 FIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLA 184
F++ L L K S G ++ S+++ + +K A + + + LA
Sbjct: 121 FMLTQALLPLLLK--------SDAGSLVFTSSSVGRQGRANWGAYAVSKFATEGLXQVLA 172
Query: 185 LEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEE---IRSKATDYMAAYKF 230
E+ +RVN I PG TA + P E D M Y +
Sbjct: 173 DEY-QQRNLRVNCINPGGT-RTAMRASAFPTEDPQKLKTPADIMPLYLW 219
|
Escherichia coli K-12 YCIK and related proteins have a canonical classical SDR nucleotide-binding motif and active site tetrad. They are predicted oxoacyl-(acyl carrier protein/ACP) reductases. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 236 |
| >gnl|CDD|187662 cd09761, A3DFK9-like_SDR_c, Clostridium thermocellum A3DFK9-like, a putative carbohydrate or polyalcohol metabolizing SDR, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 77.2 bits (190), Expect = 6e-17
Identities = 63/235 (26%), Positives = 101/235 (42%), Gaps = 15/235 (6%)
Query: 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVR 71
GKVA++TGGG GIG +I L + G + + R A A + G + GDV
Sbjct: 1 GKVAIVTGGGHGIGKQICLDFLEAGDKVVFADIDEE--RGADFA-EAEGPNLFFVHGDVA 57
Query: 72 KREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEA 131
VV + + G++D+LVN AA L + ++ ++ G + +
Sbjct: 58 DETLVKFVVYAMLEKLGRIDVLVNNAARGSKGILSSLLLEEWDRILSVNLTGPYELSRYC 117
Query: 132 LKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDY 191
L K G IINI++T + + +A+K + ++T +LA+ G D
Sbjct: 118 RDELIKN---------KGRIINIASTRAFQSEPDSEAYAASKGGLVALTHALAMSLGPD- 167
Query: 192 AIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246
IRVN I+PG I +T + + + A + G DIA L+L
Sbjct: 168 -IRVNCISPGWI-NTTEQQEFTAAPLTQEDHAQHPAGRVGTPKDIANLVLFLCQQ 220
|
This subgroup includes a putative carbohydrate or polyalcohol metabolizing SDR (A3DFK9) from Clostridium thermocellum. Its members have a TGXXXGXG classical-SDR glycine-rich NAD-binding motif, and some have a canonical SDR active site tetrad (A3DFK9 lacks the upstream Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 242 |
| >gnl|CDD|180822 PRK07069, PRK07069, short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 77.1 bits (190), Expect = 6e-17
Identities = 68/241 (28%), Positives = 103/241 (42%), Gaps = 19/241 (7%)
Query: 15 ALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVA----ALHSLGIPAIGLEGDV 70
A +TG G+G I+ ++ + GA + + A A A H G+ A DV
Sbjct: 2 AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGV-AFAAVQDV 60
Query: 71 RKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHE 130
++ + G L +LVN A E + + +R V+ I+ F+ C
Sbjct: 61 TDEAQWQALLAQAADAMGGLSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKH 120
Query: 131 ALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG-T 189
AL YL+ I+NIS+ + A +A+KAAV S+T+S+AL+
Sbjct: 121 ALPYLRASQPAS--------IVNISSVAAFKAEPDYTAYNASKAAVASLTKSIALDCARR 172
Query: 190 DYAIRVNGIAPGPIKDT---AGVSK-LAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245
+R N I P I T + + L EE K + + GE D+A A LYLAS
Sbjct: 173 GLDVRCNSIHPTFI-RTGIVDPIFQRLGEEEATRKLARGVPLGRLGEPDDVAHAVLYLAS 231
Query: 246 D 246
D
Sbjct: 232 D 232
|
Length = 251 |
| >gnl|CDD|187628 cd05370, SDR_c2, classical (c) SDR, subgroup 2 | Back alignment and domain information |
|---|
Score = 76.6 bits (189), Expect = 7e-17
Identities = 59/213 (27%), Positives = 95/213 (44%), Gaps = 28/213 (13%)
Query: 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLE 67
L G L+TGG SGIG ++ + + G + I GRR+ L A L ++ +
Sbjct: 1 MKLTGNTVLITGGTSGIGLALARKFLEAGNTVIITGRREERLAEAKKELPNIHT----IV 56
Query: 68 GDVRKREDAVRVVESTINHFGKLDILVNAAA----GNFLVPAEDLSPNGFRTVIEIDSVG 123
DV E + E+ ++ + LDIL+N A + PA DL + T I+ + +G
Sbjct: 57 LDVGDAESVEALAEALLSEYPNLDILINNAGIQRPIDLRDPASDL--DKADTEIDTNLIG 114
Query: 124 TFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH--VSAAKAAVDSITR 181
+ L +LKK + +A+ I+N+S+ L + + A KAA+ S T
Sbjct: 115 PIRLIKAFLPHLKK--QPEAT------IVNVSSGLAFVP--MAANPVYCATKAALHSYTL 164
Query: 182 SL--ALEWGTDYAIRVNGIAPGPIKDTAGVSKL 212
+L L+ D + V I P P DT +
Sbjct: 165 ALRHQLK---DTGVEVVEIVP-PAVDTELHEER 193
|
Short-chain dehydrogenases/reductases (SDRs, aka Tyrosine-dependent oxidoreductases) are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 228 |
| >gnl|CDD|135631 PRK05867, PRK05867, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 76.6 bits (188), Expect = 9e-17
Identities = 67/241 (27%), Positives = 110/241 (45%), Gaps = 15/241 (6%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L GK AL+TG +GIG ++L + GA +AI R L + + G + + D
Sbjct: 7 LHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCD 66
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
V + + +++ G +DI V A + P D+ F+ + + G F+
Sbjct: 67 VSQHQQVTSMLDQVTAELGGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQ 126
Query: 130 EALKYLKKGGRGQA---SSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALE 186
A K + K G+G ++S G IIN+ + H A+KAAV +T+++A+E
Sbjct: 127 AAAKAMVKQGQGGVIINTASMSGHIINVPQQVS--------HYCASKAAVIHLTKAMAVE 178
Query: 187 WGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246
+ IRVN ++PG I T V E + + + G ++A LYLAS+
Sbjct: 179 LAP-HKIRVNSVSPGYIL-TELVEPYT--EYQPLWEPKIPLGRLGRPEELAGLYLYLASE 234
Query: 247 A 247
A
Sbjct: 235 A 235
|
Length = 253 |
| >gnl|CDD|132250 TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Score = 76.1 bits (187), Expect = 1e-16
Identities = 62/242 (25%), Positives = 107/242 (44%), Gaps = 15/242 (6%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
LK K A++TGGG GIG + + GA +A+ + A + + G A D
Sbjct: 1 LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACD 60
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
+ R+ V + G +D+LVN A + P P + +I I+ G M H
Sbjct: 61 ITDRDSVDTAVAAAEQALGPVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHH 120
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
L + + G G+ I+NI++ + + +A K + + ++++A E
Sbjct: 121 AVLPGMVERGAGR--------IVNIASDAARVGSSGEAVYAACKGGLVAFSKTMAREHAR 172
Query: 190 DYAIRVNGIAPGPIKDTAGVSKLA-----PEEIRSKATDYMAAYKFGEKWDIAMAALYLA 244
+ I VN + PGP DTA + + PE++R T + + G+ D+ A L+ +
Sbjct: 173 -HGITVNVVCPGP-TDTALLDDICGGAENPEKLREAFTRAIPLGRLGQPDDLPGAILFFS 230
Query: 245 SD 246
SD
Sbjct: 231 SD 232
|
Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. Length = 250 |
| >gnl|CDD|180413 PRK06128, PRK06128, oxidoreductase; Provisional | Back alignment and domain information |
|---|
Score = 76.8 bits (189), Expect = 2e-16
Identities = 58/197 (29%), Positives = 95/197 (48%), Gaps = 14/197 (7%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAI--MGRRKTVLRSAVAALHSLGIPAIGLE 67
L+G+ AL+TG SGIG ++ + GA IA+ + + V + + G A+ L
Sbjct: 53 LQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALP 112
Query: 68 GDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVP-AEDLSPNGFRTVIEIDSVGTFI 126
GD++ ++VE + G LDILVN A V D++ F + + F
Sbjct: 113 GDLKDEAFCRQLVERAVKELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFW 172
Query: 127 MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALE 186
+C A+ +L G AS IIN + Y + + ++ KAA+ + T++LA +
Sbjct: 173 LCKAAIPHLPPG----AS------IINTGSIQSYQPSPTLLDYASTKAAIVAFTKALAKQ 222
Query: 187 WGTDYAIRVNGIAPGPI 203
+ IRVN +APGP+
Sbjct: 223 V-AEKGIRVNAVAPGPV 238
|
Length = 300 |
| >gnl|CDD|187611 cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-hydroxyacyl-CoA dehydrogenase-like, classical(c)-like SDRs | Back alignment and domain information |
|---|
Score = 75.4 bits (186), Expect = 2e-16
Identities = 60/206 (29%), Positives = 97/206 (47%), Gaps = 29/206 (14%)
Query: 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIA---IMGRRKTVLRSAVAA------LHSL 59
G+V L+TG G G+G +L + GA + + G RK +S+ AA + +
Sbjct: 2 RFDGRVVLVTGAGGGLGRAYALAFAERGAKVVVNDLGGDRKGSGKSSSAADKVVDEIKAA 61
Query: 60 GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAA----GNFLVPAEDLSPNGFRT 115
G A+ V ED ++V++ I+ FG++DILVN A +F +E+ +
Sbjct: 62 GGKAVANYDSV---EDGEKIVKTAIDAFGRVDILVNNAGILRDRSFAKMSEED----WDL 114
Query: 116 VIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAA 175
V+ + G+F + A Y++K G IIN S+ + Q + SAAK
Sbjct: 115 VMRVHLKGSFKVTRAAWPYMRK--------QKFGRIINTSSAAGLYGNFGQANYSAAKLG 166
Query: 176 VDSITRSLALEWGTDYAIRVNGIAPG 201
+ ++ +LA+E G Y I N IAP
Sbjct: 167 LLGLSNTLAIE-GAKYNITCNTIAPA 191
|
Beta oxidation of fatty acids in eukaryotes occurs by a four-reaction cycle, that may take place in mitochondria or in peroxisomes. (3R)-hydroxyacyl-CoA dehydrogenase is part of rat peroxisomal multifunctional MFE-2, it is a member of the NAD-dependent SDRs, but contains an additional small C-terminal domain that completes the active site pocket and participates in dimerization. The atypical, additional C-terminal extension allows for more extensive dimerization contact than other SDRs. MFE-2 catalyzes the second and third reactions of the peroxisomal beta oxidation cycle. Proteins in this subgroup have a typical catalytic triad, but have a His in place of the usual upstream Asn. This subgroup also contains members identified as 17-beta-hydroxysteroid dehydrogenases, including human peroxisomal 17-beta-hydroxysteroid dehydrogenase type 4 (17beta-HSD type 4, aka MFE-2, encoded by HSD17B4 gene) which is involved in fatty acid beta-oxidation and steroid metabolism. This subgroup also includes two SDR domains of the Neurospora crassa and Saccharomyces cerevisiae multifunctional beta-oxidation protein (MFP, aka Fox2). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 250 |
| >gnl|CDD|223696 COG0623, FabI, Enoyl-[acyl-carrier-protein] | Back alignment and domain information |
|---|
Score = 75.3 bits (186), Expect = 3e-16
Identities = 67/264 (25%), Positives = 103/264 (39%), Gaps = 58/264 (21%)
Query: 9 ILKGKVALLTGGGS--GIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGL 66
+L+GK L+ G + I + I+ L + GA +A + L V L + L
Sbjct: 3 LLEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQ-GERLEKRVEELAEELGSDLVL 61
Query: 67 EGDVRKREDAVRVVESTINHFGKLDILVNAAA--------GNFLVPAEDLSPNGFRTVIE 118
DV E + + +GKLD LV++ A G++L D S GF ++
Sbjct: 62 PCDVTNDESIDALFATIKKKWGKLDGLVHSIAFAPKEELKGDYL----DTSREGFLIAMD 117
Query: 119 IDSVGTFI-MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW-----YQIHVSAA 172
I S +F + A + GG I+ TL Y + Y + + A
Sbjct: 118 I-SAYSFTALAKAARPLMNNGG---------SIL-----TLTYLGSERVVPNYNV-MGVA 161
Query: 173 KAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGE 232
KAA+++ R LA + G IRVN I+ GPI+ A S D+ K E
Sbjct: 162 KAALEASVRYLAADLG-KEGIRVNAISAGPIRTLAA----------SGIGDFRKMLKENE 210
Query: 233 KW----------DIAMAALYLASD 246
++ A +L SD
Sbjct: 211 ANAPLRRNVTIEEVGNTAAFLLSD 234
|
Length = 259 |
| >gnl|CDD|213929 TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | Back alignment and domain information |
|---|
Score = 75.0 bits (185), Expect = 3e-16
Identities = 66/246 (26%), Positives = 106/246 (43%), Gaps = 27/246 (10%)
Query: 15 ALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKRE 74
L+TG GIG+ ++ L + GA +A + R L VA L G P + DV
Sbjct: 1 VLVTGAAQGIGYAVARALAEAGARVAAVDRNFEQLLELVADLRRYGYPFATYKLDVADSA 60
Query: 75 DAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKY 134
VV+ +G +D+LVN A L + LS ++ +++ G F +
Sbjct: 61 AVDEVVQRLEREYGPIDVLVNVAGILRLGAIDSLSDEDWQATFAVNTFGVFNVSQAVSPR 120
Query: 135 LKKGGRGQ----ASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTD 190
+K+ G S+++ + ++A Y +A+KAA+ +T+ L LE
Sbjct: 121 MKRRRSGAIVTVGSNAANVPRMGMAA---Y---------AASKAALTMLTKCLGLELA-P 167
Query: 191 YAIRVNGIAPGPIKDTAGVSKLAPEE--IRSKATDYMAAYKFG-------EKWDIAMAAL 241
Y IR N ++PG DT +L +E + ++ G E DIA A L
Sbjct: 168 YGIRCNVVSPGS-TDTEMQRQLWNDEYGEQQVIAGSPEQFRLGIPLGKIAEPSDIANAVL 226
Query: 242 YLASDA 247
+LASD
Sbjct: 227 FLASDL 232
|
Members of this family are 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase (EC 1.3.1.28), the third enzyme in the biosynthesis of 2,3-dihydroxybenzoic acid (DHB) from chorismate. The first two enzymes are isochorismate synthase (EC 5.4.4.2) and isochorismatase (EC 3.3.2.1). Synthesis is often followed by adenylation by the enzyme DHBA-AMP ligase (EC 2.7.7.58) to activate (DHB) for a non-ribosomal peptide synthetase. Length = 250 |
| >gnl|CDD|187626 cd05368, DHRS6_like_SDR_c, human DHRS6-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 74.8 bits (184), Expect = 4e-16
Identities = 65/252 (25%), Positives = 100/252 (39%), Gaps = 41/252 (16%)
Query: 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDV 70
GKVAL+T GIG I+L + GA + + L+ GI L DV
Sbjct: 1 DGKVALITAAAQGIGRAIALAFAREGANVIATDINEEKLKELER---GPGITTRVL--DV 55
Query: 71 RKREDAVRVVESTINHFGKLDILVNAAA----GNFLVPAEDLSPNGFRTVIEIDSVGTFI 126
+E V + G++D+L N A G+ L D + + + ++ ++
Sbjct: 56 TDKEQ----VAALAKEEGRIDVLFNCAGFVHHGSIL----DCEDDDWDFAMNLNVRSMYL 107
Query: 127 MCHEAL-KYLKKGGRGQASSSSGGIIINI-SATLHYTATWYQIHVSAAKAAVDSITRSLA 184
M L K L + G IIN+ S + S KAAV +T+S+A
Sbjct: 108 MIKAVLPKMLARK---------DGSIINMSSVASSIKGVPNRFVYSTTKAAVIGLTKSVA 158
Query: 185 LEWGTDYAIRVNGIAPGPIKDTAGVSKLA-----PEEIRSKATDYMAAY---KFGEKWDI 236
++ IR N I PG + DT + + PEE + A + ++
Sbjct: 159 ADF-AQQGIRCNAICPGTV-DTPSLEERIQAQPDPEEAL---KAFAARQPLGRLATPEEV 213
Query: 237 AMAALYLASDAG 248
A A+YLASD
Sbjct: 214 AALAVYLASDES 225
|
Human DHRS6, and similar proteins. These proteins are classical SDRs, with a canonical active site tetrad and a close match to the typical Gly-rich NAD-binding motif. Human DHRS6 is a cytosolic type 2 (R)-hydroxybutyrate dehydrogenase, which catalyses the conversion of (R)-hydroxybutyrate to acetoacetate. Also included in this subgroup is Escherichia coli UcpA (upstream cys P). Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Note: removed : needed to make this chiodl smaller when drew final trees: rmeoved text form description: Other proteins in this subgroup include Thermoplasma acidophilum aldohexose dehydrogenase, which has high dehydrogenase activity against D-mannose, Bacillus subtilis BacC involved in the biosynthesis of the dipeptide bacilysin and its antibiotic moiety anticapsin, Sphingomonas paucimobilis strain B90 LinC, involved in the degradation of hexachlorocyclohexane isomers...... P). Length = 241 |
| >gnl|CDD|181491 PRK08589, PRK08589, short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 75.2 bits (185), Expect = 5e-16
Identities = 71/249 (28%), Positives = 110/249 (44%), Gaps = 28/249 (11%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L+ KVA++TG +GIG ++ L + GA + + + V + S G A D
Sbjct: 4 LENKVAVITGASTGIGQASAIALAQEGAYV-LAVDIAEAVSETVDKIKSNGGKAKAYHVD 62
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAA-----AGNFLVPAEDLSPNGFRTVIEIDSVGT 124
+ + FG++D+L N A AG D+ F ++ +D GT
Sbjct: 63 ISDEQQVKDFASEIKEQFGRVDVLFNNAGVDNAAGRIHEYPVDV----FDKIMAVDMRGT 118
Query: 125 FIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLA 184
F+M L + + GG IIN S+ A Y+ +AAK AV + T+S+A
Sbjct: 119 FLMTKMLLPLMME---------QGGSIINTSSFSGQAADLYRSGYNAAKGAVINFTKSIA 169
Query: 185 LEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKF-------GEKWDIA 237
+E+G D IR N IAPG I +T V KL + K+ G+ ++A
Sbjct: 170 IEYGRD-GIRANAIAPGTI-ETPLVDKLTGTSEDEAGKTFRENQKWMTPLGRLGKPEEVA 227
Query: 238 MAALYLASD 246
++LASD
Sbjct: 228 KLVVFLASD 236
|
Length = 272 |
| >gnl|CDD|236209 PRK08265, PRK08265, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 74.7 bits (184), Expect = 6e-16
Identities = 74/247 (29%), Positives = 118/247 (47%), Gaps = 30/247 (12%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L GKVA++TGG + IG ++ L GA +AI+ +AVAA SLG A + D
Sbjct: 4 LAGKVAIVTGGATLIGAAVARALVAAGARVAIVD-IDADNGAAVAA--SLGERARFIATD 60
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
+ R V + + FG++DILVN A +L S + ++++ V ++
Sbjct: 61 ITDDAAIERAVATVVARFGRVDILVNLAC-TYLDDGLASSRADWLAALDVNLVSAAMLAQ 119
Query: 130 EALKYLKKGGRGQASSSSGGIIIN---ISATLHYTATW-YQIHVSAAKAAVDSITRSLAL 185
A +L +G GG I+N ISA T W Y A+KAA+ +TRS+A+
Sbjct: 120 AAHPHLARG---------GGAIVNFTSISAKFAQTGRWLY----PASKAAIRQLTRSMAM 166
Query: 186 EWGTDYAIRVNGIAPG----PIKDT-AGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAA 240
+ D IRVN ++PG + D +G + + + A + + G+ ++A
Sbjct: 167 DLAPD-GIRVNSVSPGWTWSRVMDELSGGDRAKADRV---AAPFHLLGRVGDPEEVAQVV 222
Query: 241 LYLASDA 247
+L SDA
Sbjct: 223 AFLCSDA 229
|
Length = 261 |
| >gnl|CDD|183719 PRK12747, PRK12747, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 74.3 bits (182), Expect = 6e-16
Identities = 76/247 (30%), Positives = 111/247 (44%), Gaps = 24/247 (9%)
Query: 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAI-MGRRKTVLRSAVAALHSLGIPAIGLE 67
+LKGKVAL+TG GIG I+ +L GA +AI G RK V + S G A +
Sbjct: 1 MLKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIG 60
Query: 68 GDVRKREDAVRVVESTINHF------GKLDILVNAAA---GNFLVPAEDLSPNGFRTVIE 118
++ + S N K DIL+N A G F+ E+ + F ++
Sbjct: 61 ANLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFI---EETTEQFFDRMVS 117
Query: 119 IDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDS 178
+++ F + +AL L+ R IINIS+ + I S K A+++
Sbjct: 118 VNAKAPFFIIQQALSRLRDNSR----------IINISSAATRISLPDFIAYSMTKGAINT 167
Query: 179 ITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAM 238
+T +LA + G I VN I PG IK L+ ++ AT A + GE DIA
Sbjct: 168 MTFTLAKQLGAR-GITVNAILPGFIKTDMNAELLSDPMMKQYATTISAFNRLGEVEDIAD 226
Query: 239 AALYLAS 245
A +LAS
Sbjct: 227 TAAFLAS 233
|
Length = 252 |
| >gnl|CDD|181188 PRK07985, PRK07985, oxidoreductase; Provisional | Back alignment and domain information |
|---|
Score = 74.6 bits (183), Expect = 8e-16
Identities = 65/239 (27%), Positives = 106/239 (44%), Gaps = 14/239 (5%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAI--MGRRKTVLRSAVAALHSLGIPAIGLE 67
LK + AL+TGG SGIG ++ + GA +AI + + + + G A+ L
Sbjct: 47 LKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLP 106
Query: 68 GDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVP-AEDLSPNGFRTVIEIDSVGTFI 126
GD+ + A +V G LDI+ A +P DL+ F+ I+ F
Sbjct: 107 GDLSDEKFARSLVHEAHKALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFW 166
Query: 127 MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALE 186
+ EA+ L KG II S+ Y + + + +A KAA+ + +R LA +
Sbjct: 167 LTQEAIPLLPKGAS----------IITTSSIQAYQPSPHLLDYAATKAAILNYSRGLAKQ 216
Query: 187 WGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245
+ IRVN +APGPI +S ++ + + G+ ++A +YLAS
Sbjct: 217 VA-EKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMKRAGQPAELAPVYVYLAS 274
|
Length = 294 |
| >gnl|CDD|187601 cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 73.7 bits (181), Expect = 1e-15
Identities = 59/240 (24%), Positives = 100/240 (41%), Gaps = 12/240 (5%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAI-GLEG 68
+G+VAL+TG GIG ++ L +HG + RR + + A S G P + +
Sbjct: 4 WRGRVALVTGASVGIGAAVARALVQHGMKVVGCARRVDKIEALAAECQSAGYPTLFPYQC 63
Query: 69 DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
D+ E + + + +D+ +N A P G++ + +++ + I
Sbjct: 64 DLSNEEQILSMFSAIRTQHQGVDVCINNAGLARPEPLLSGKTEGWKEMFDVNVLALSICT 123
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATL-HYTATWYQIHV-SAAKAAVDSITRSLALE 186
EA + +K+ G IINI++ H H +A K AV ++T L E
Sbjct: 124 REAYQSMKERNVDD------GHIININSMSGHRVPPVSVFHFYAATKHAVTALTEGLRQE 177
Query: 187 W-GTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245
IR I+PG + +T KL + A Y + + D+A A LY+ S
Sbjct: 178 LREAKTHIRATSISPGLV-ETEFAFKLHDNDPEKAAATYESIPCLKPE-DVANAVLYVLS 235
|
Human Mgc4172-like proteins, putative SDRs. These proteins are members of the SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250 |
| >gnl|CDD|183773 PRK12824, PRK12824, acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Score = 73.3 bits (180), Expect = 1e-15
Identities = 68/254 (26%), Positives = 97/254 (38%), Gaps = 46/254 (18%)
Query: 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK 72
K+AL+TG GIG I+ +L G +A S A +
Sbjct: 3 KIALVTGAKRGIGSAIARELLNDG-------------YRVIATYFSGNDCAKDWFEEYGF 49
Query: 73 REDAVRVVESTINHF--------------GKLDILVNAAA----GNFLVPAEDLSPNGFR 114
ED VR+ E + G +DILVN A F +S +
Sbjct: 50 TEDQVRLKELDVTDTEECAEALAEIEEEEGPVDILVNNAGITRDSVFK----RMSHQEWN 105
Query: 115 TVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKA 174
VI + F + + + G G IINIS+ + Q + SAAKA
Sbjct: 106 DVINTNLNSVFNVTQPLFAAMCEQG--------YGRIINISSVNGLKGQFGQTNYSAAKA 157
Query: 175 AVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKW 234
+ T++LA E G Y I VN IAPG I T V + E+ + + + G
Sbjct: 158 GMIGFTKALASE-GARYGITVNCIAPGYIA-TPMVEQ-MGPEVLQSIVNQIPMKRLGTPE 214
Query: 235 DIAMAALYLASDAG 248
+IA A +L S+A
Sbjct: 215 EIAAAVAFLVSEAA 228
|
Length = 245 |
| >gnl|CDD|212493 cd08932, HetN_like_SDR_c, HetN oxidoreductase-like, classical (c) SDR | Back alignment and domain information |
|---|
Score = 72.8 bits (179), Expect = 1e-15
Identities = 53/204 (25%), Positives = 91/204 (44%), Gaps = 20/204 (9%)
Query: 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK 72
KVAL+TG GIG EI+ L + G +++ R L + A+ + D R
Sbjct: 1 KVALVTGASRGIGIEIARALARDGYRVSLGLRNPEDLAALSASGGD----VEAVPYDARD 56
Query: 73 REDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEAL 132
EDA +V++ + FG++D+LV+ A + S I+ + + L
Sbjct: 57 PEDARALVDALRDRFGRIDVLVHNAGIGRPTTLREGSDAELEAHFSINVIAPAELTRALL 116
Query: 133 KYLKKGGRGQA---SSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
L++ G G+ +S SG ++ +A SA+K A+ ++ +L E G
Sbjct: 117 PALREAGSGRVVFLNSLSGKRVLAGNAGY-----------SASKFALRALAHALRQE-GW 164
Query: 190 DYAIRVNGIAPGPIKDTAGVSKLA 213
D+ +RV+ + PG + DT L
Sbjct: 165 DHGVRVSAVCPGFV-DTPMAQGLT 187
|
This subgroup includes Anabaena sp. strain PCC 7120 HetN, a putative oxidoreductase involved in heterocyst differentiation, and related proteins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 223 |
| >gnl|CDD|183489 PRK12384, PRK12384, sorbitol-6-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 72.8 bits (179), Expect = 2e-15
Identities = 52/249 (20%), Positives = 99/249 (39%), Gaps = 22/249 (8%)
Query: 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIM---GRRKTVLRSAVAALHSLGIPAIGLE 67
+VA++ GGG +G + L + G +A+ + + + A + G+ A G
Sbjct: 1 MNQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGM-AYGFG 59
Query: 68 GDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIM 127
D + + + FG++D+LV A D F ++++ VG F+
Sbjct: 60 ADATSEQSVLALSRGVDEIFGRVDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLC 119
Query: 128 CHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEW 187
E + + + G G II I++ + + SAAK +T+SLAL+
Sbjct: 120 AREFSRLMIRDG-------IQGRIIQINSKSGKVGSKHNSGYSAAKFGGVGLTQSLALDL 172
Query: 188 GTDYAIRVNGIAPGPIKDT----------AGVSKLAPEEIRSKATDYMAAYKFGEKWDIA 237
+Y I V+ + G + + A + P+E+ D + + + D+
Sbjct: 173 A-EYGITVHSLMLGNLLKSPMFQSLLPQYAKKLGIKPDEVEQYYIDKVPLKRGCDYQDVL 231
Query: 238 MAALYLASD 246
L+ AS
Sbjct: 232 NMLLFYASP 240
|
Length = 259 |
| >gnl|CDD|235633 PRK05872, PRK05872, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 72.7 bits (179), Expect = 4e-15
Identities = 45/178 (25%), Positives = 77/178 (43%), Gaps = 12/178 (6%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L GKV ++TG GIG E++ +L GA +A++ + L + A L + + D
Sbjct: 7 LAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGG-DDRVLTVVAD 65
Query: 70 VRKREDAVRVVESTINHFGKLDILV-NAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
V E + FG +D++V NA + + P+ FR VI+++ +G F
Sbjct: 66 VTDLAAMQAAAEEAVERFGGIDVVVANAGIASG-GSVAQVDPDAFRRVIDVNLLGVFHTV 124
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALE 186
L L G ++ +S+ + A A+KA V++ +L LE
Sbjct: 125 RATLPAL---------IERRGYVLQVSSLAAFAAAPGMAAYCASKAGVEAFANALRLE 173
|
Length = 296 |
| >gnl|CDD|187664 cd09763, DHRS1-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) -like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 72.1 bits (177), Expect = 4e-15
Identities = 57/232 (24%), Positives = 93/232 (40%), Gaps = 20/232 (8%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTV-LRSAVAALHSLGIPAIGLEG 68
L GK+AL+TG GIG I+LQLG+ GA + I GR L + + G I +
Sbjct: 1 LSGKIALVTGASRGIGRGIALQLGEAGATVYITGRTILPQLPGTAEEIEARGGKCIPVRC 60
Query: 69 DVRKREDAVRVVESTINHF-GKLDILVNAAAG-------NFLVPAEDLSPNGFRTVIEID 120
D ++ + E G+LDILVN A P + P + + +
Sbjct: 61 DHSDDDEVEALFERVAREQQGRLDILVNNAYAAVQLILVGVAKPFWEEPPTIWDDINNVG 120
Query: 121 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSIT 180
+ A + K G+G I+ IS + + + KAA+D +
Sbjct: 121 LRAHYACSVYAAPLMVKAGKGL--------IVIIS-STGGLEYLFNVAYGVGKAAIDRMA 171
Query: 181 RSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGE 232
+A E + + V + PG ++ T V ++ ++ S A+ GE
Sbjct: 172 ADMAHEL-KPHGVAVVSLWPGFVR-TELVLEMPEDDEGSWHAKERDAFLNGE 221
|
This subgroup includes human DHRS1 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 265 |
| >gnl|CDD|236210 PRK08267, PRK08267, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 70.7 bits (174), Expect = 1e-14
Identities = 62/216 (28%), Positives = 89/216 (41%), Gaps = 28/216 (12%)
Query: 16 LLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKRED 75
+TG SGIG +L G + + L A+AA G G DV R
Sbjct: 5 FITGAASGIGRATALLFAAEGWRVGAYDINEAGLA-ALAAELGAGNAWTG-ALDVTDRAA 62
Query: 76 -AVRVVESTINHFGKLDILVNAA----AGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHE 130
+ + G+LD+L N A G F ED+ VI+I+ G H
Sbjct: 63 WDAALADFAAATGGRLDVLFNNAGILRGGPF----EDIPLEAHDRVIDINVKGVLNGAHA 118
Query: 131 ALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHV---SAAKAAVDSITRSLALEW 187
AL YLK + G +IN S+ +A + Q + SA K AV +T +L LEW
Sbjct: 119 ALPYLKA--------TPGARVINTSSA---SAIYGQPGLAVYSATKFAVRGLTEALDLEW 167
Query: 188 GTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATD 223
+ IRV + P + DTA + E+ + +T
Sbjct: 168 R-RHGIRVADVMPLFV-DTAML-DGTSNEVDAGSTK 200
|
Length = 260 |
| >gnl|CDD|235545 PRK05650, PRK05650, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 70.1 bits (172), Expect = 3e-14
Identities = 44/190 (23%), Positives = 79/190 (41%), Gaps = 17/190 (8%)
Query: 16 LLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKRED 75
++TG SG+G I+L+ + G +A+ + + L G DVR
Sbjct: 4 MITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQ 63
Query: 76 AVRVVESTINHFGKLDILVN----AAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEA 131
+ ++ +G +D++VN A+ G F E+LS + I I+ +G C
Sbjct: 64 LTALAQACEEKWGGIDVIVNNAGVASGGFF----EELSLEDWDWQIAINLMGVVKGCKAF 119
Query: 132 LKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDY 191
L K+ G+ I+NI++ + AKA V +++ +L +E D
Sbjct: 120 LPLFKRQKSGR--------IVNIASMAGLMQGPAMSSYNVAKAGVVALSETLLVEL-ADD 170
Query: 192 AIRVNGIAPG 201
I V+ + P
Sbjct: 171 EIGVHVVCPS 180
|
Length = 270 |
| >gnl|CDD|180771 PRK06947, PRK06947, glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 69.4 bits (170), Expect = 3e-14
Identities = 67/243 (27%), Positives = 111/243 (45%), Gaps = 20/243 (8%)
Query: 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR-KTVLRSAVAALHSLGIPAIGLEGDVR 71
KV L+TG GIG ++ G ++ I R A+ + G A + GDV
Sbjct: 3 KVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVA 62
Query: 72 KREDAVRVVESTINHFGKLDILVNAAAGNFLVPAE---DLSPNGFRTVIEIDSVGTFIMC 128
D + + ++ + FG+LD LVN A + P+ D+ R + + + +G ++
Sbjct: 63 NEADVIAMFDAVQSAFGRLDALVNNAG--IVAPSMPLADMDAARLRRMFDTNVLGAYLCA 120
Query: 129 HEALKYLK--KGGRGQASSSSGGIIINISATLHYTATWYQ-IHVSAAKAAVDSITRSLAL 185
EA + L +GGR GG I+N+S+ + + + + +K AVD++T LA
Sbjct: 121 REAARRLSTDRGGR-------GGAIVNVSSIASRLGSPNEYVDYAGSKGAVDTLTLGLAK 173
Query: 186 EWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEI-RSKATDYMAAYKFGEKWDIAMAALYLA 244
E G +RVN + PG I+ S P R A + + GE ++A ++L
Sbjct: 174 ELGPH-GVRVNAVRPGLIETEIHASGGQPGRAARLGAQTPLG--RAGEADEVAETIVWLL 230
Query: 245 SDA 247
SDA
Sbjct: 231 SDA 233
|
Length = 248 |
| >gnl|CDD|183716 PRK12744, PRK12744, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 69.4 bits (170), Expect = 4e-14
Identities = 53/201 (26%), Positives = 88/201 (43%), Gaps = 16/201 (7%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGA-AIAI---MGRRKTVLRSAVAALHSLGIPAIG 65
LKGKV L+ GG +G I+ L GA A+AI K VAA+ + G A+
Sbjct: 6 LKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVA 65
Query: 66 LEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTF 125
+ D+ ++ + FG+ DI +N P ++S + + ++S F
Sbjct: 66 FQADLTTAAAVEKLFDDAKAAFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAF 125
Query: 126 IMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLAL 185
EA ++L G+ I+ + +L T + + +KA V+ TR+ +
Sbjct: 126 FFIKEAGRHLNDNGK----------IVTLVTSLLGAFTPFYSAYAGSKAPVEHFTRAASK 175
Query: 186 EWGTDYAIRVNGIAPGPIKDT 206
E+G I V + PGP+ DT
Sbjct: 176 EFG-ARGISVTAVGPGPM-DT 194
|
Length = 257 |
| >gnl|CDD|187596 cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 1, classical (c) SDR | Back alignment and domain information |
|---|
Score = 69.4 bits (170), Expect = 4e-14
Identities = 65/242 (26%), Positives = 104/242 (42%), Gaps = 19/242 (7%)
Query: 14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSA-VAALHSLGIPAIGLEGDVRK 72
VA++TG GIG I+ +L G IAI + VA + + G AI + D+ +
Sbjct: 3 VAIVTGASRGIGRAIATELAARGFDIAINDLPDDDQATEVVAEVLAAGRRAIYFQADIGE 62
Query: 73 REDAVRVVESTINHFGKLDILVNAAA------GNFLVPAEDLSPNGFRTVIEIDSVGTFI 126
D +++ FG+LD LVN A G+ L DL+ + F +I I+ G F
Sbjct: 63 LSDHEALLDQAWEDFGRLDCLVNNAGIAVRPRGDLL----DLTEDSFDRLIAINLRGPFF 118
Query: 127 MCHE-ALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLAL 185
+ A + +++ R S II +++ Y + + +KA + TR LA
Sbjct: 119 LTQAVARRMVEQPDRFDGPHRS---IIFVTSINAYLVSPNRGEYCISKAGLSMATRLLAY 175
Query: 186 EWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAY-KFGEKWDIAMAALYLA 244
D I V+ I PG I ++ E+ + ++G+ DIA A LA
Sbjct: 176 RLA-DEGIAVHEIRPGLIH--TDMTAPVKEKYDELIAAGLVPIRRWGQPEDIAKAVRTLA 232
Query: 245 SD 246
S
Sbjct: 233 SG 234
|
This subgroup includes Escherichia coli CFT073 FabG. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 255 |
| >gnl|CDD|212492 cd05327, retinol-DH_like_SDR_c_like, retinol dehydrogenase (retinol-DH), Light dependent Protochlorophyllide (Pchlide) OxidoReductase (LPOR) and related proteins, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 69.6 bits (171), Expect = 4e-14
Identities = 44/159 (27%), Positives = 70/159 (44%), Gaps = 24/159 (15%)
Query: 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG----IPAIGLE 67
GKV ++TG SGIG E + +L K GA + I R + A A + + I L+
Sbjct: 1 GKVVVITGANSGIGKETARELAKRGAHVIIACRNEEKGEEAAAEIKKETGNAKVEVIQLD 60
Query: 68 ----GDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVG 123
VR+ E + F +LDIL+N A + P L+ +GF ++ +G
Sbjct: 61 LSSLASVRQ------FAEEFLARFPRLDILINNAGI--MAPPRRLTKDGFELQFAVNYLG 112
Query: 124 TFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 162
F++ + L LK S+ I+N+S+ H
Sbjct: 113 HFLLTNLLLPVLKA--------SAPSRIVNVSSIAHRAG 143
|
Classical SDR subgroup containing retinol-DHs, LPORs, and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Pchlide reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14, dehydrogenase/reductase SDR family member (DHRS)-12 , -13 and -X (a DHRS on chromosome X), and WWOX (WW domain-containing oxidoreductase), as well as a Neurospora crassa SDR encoded by the blue light inducible bli-4 gene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 269 |
| >gnl|CDD|187608 cd05350, SDR_c6, classical (c) SDR, subgroup 6 | Back alignment and domain information |
|---|
Score = 68.5 bits (168), Expect = 6e-14
Identities = 56/195 (28%), Positives = 79/195 (40%), Gaps = 19/195 (9%)
Query: 15 ALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKRE 74
L+TG SGIG ++ + K G +A+ RR L A L + DV E
Sbjct: 1 VLITGASSGIGRALAREFAKAGYNVALAARRTDRLDELKAELLNPNPSVEVEILDVTDEE 60
Query: 75 DAVRVVESTINHFGKLDILV-NAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALK 133
V+ G LD+++ NA G DLS FR I+ + +G + AL
Sbjct: 61 RNQLVIAELEAELGGLDLVIINAGVG-KGTSLGDLSFKAFRETIDTNLLGAAAILEAALP 119
Query: 134 YLKKGGRGQASSSSGGIIINISATLHY----TATWYQIHVSAAKAAVDSITRSLALEWGT 189
+ GRG ++ IS+ A Y SA+KAA+ S+ SL +
Sbjct: 120 QFRAKGRGH--------LVLISSVAALRGLPGAAAY----SASKAALSSLAESLRYDV-K 166
Query: 190 DYAIRVNGIAPGPIK 204
IRV I PG I
Sbjct: 167 KRGIRVTVINPGFID 181
|
These proteins are members of the classical SDR family, with a canonical active site tetrad and a fairly well conserved typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239 |
| >gnl|CDD|236190 PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 68.4 bits (168), Expect = 9e-14
Identities = 58/251 (23%), Positives = 99/251 (39%), Gaps = 36/251 (14%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
GK +TG GIG+ ++L + GA + + A L D
Sbjct: 6 FSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAFLTQEDYPFATFVL---------D 56
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
V +V + + G LD+LVNAA + + LS ++ +++ G F +
Sbjct: 57 VSDAAAVAQVCQRLLAETGPLDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFR 116
Query: 130 EALKYLKKGGRGQ----ASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLAL 185
+ ++ G S+++ I ++A Y A+KAA+ S+ + + L
Sbjct: 117 AVMPQFRRQRSGAIVTVGSNAAHVPRIGMAA---Y---------GASKAALTSLAKCVGL 164
Query: 186 EWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKAT--DYMAAYKFG-------EKWDI 236
E Y +R N ++PG DT L +E + + +K G +I
Sbjct: 165 ELA-PYGVRCNVVSPGS-TDTDMQRTLWVDEDGEQQVIAGFPEQFKLGIPLGKIARPQEI 222
Query: 237 AMAALYLASDA 247
A A L+LASD
Sbjct: 223 ANAVLFLASDL 233
|
Length = 252 |
| >gnl|CDD|187598 cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hydroxysteroid dehydrogenase XI-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 67.7 bits (166), Expect = 2e-13
Identities = 45/196 (22%), Positives = 73/196 (37%), Gaps = 16/196 (8%)
Query: 14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKR 73
+ L+TGGGSGIG ++L+ K GA + I+ + + G + DV KR
Sbjct: 1 IVLITGGGSGIGRLLALEFAKRGAKVVILDINEKGAEETANNVRKAGGKVHYYKCDVSKR 60
Query: 74 EDAVRVVESTINHFGKLDILVNAAA---GNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHE 130
E+ + G + IL+N A G L +L E++++ F
Sbjct: 61 EEVYEAAKKIKKEVGDVTILINNAGVVSGKKL---LELPDEEIEKTFEVNTLAHFWTTKA 117
Query: 131 ALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALE--WG 188
L + + G I+ I++ + A+KAA SL LE
Sbjct: 118 FLPDMLERNHGH--------IVTIASVAGLISPAGLADYCASKAAAVGFHESLRLELKAY 169
Query: 189 TDYAIRVNGIAPGPIK 204
I+ + P I
Sbjct: 170 GKPGIKTTLVCPYFIN 185
|
17-beta-hydroxysteroid dehydrogenases (17betaHSD) are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. 17betaHSD type XI, a classical SDR, preferentially converts 3alpha-adiol to androsterone but not numerous other tested steroids. This subgroup of classical SDRs also includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243 |
| >gnl|CDD|181120 PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 68.3 bits (167), Expect = 2e-13
Identities = 62/211 (29%), Positives = 98/211 (46%), Gaps = 11/211 (5%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAA-LHSLGIPAIGLEG 68
L GKVA++TG +G+G +L L + GA + + + S V + + G A+ + G
Sbjct: 10 LSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAG 69
Query: 69 DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
D+ +R A +V + + G LDI+VN A ++S + VI + G F++
Sbjct: 70 DISQRATADELVATAVG-LGGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLT 128
Query: 129 HEALKYLKKGGRGQASSSSG---GIIINISATLHYTATWYQIHVSAAKAAVDSITRSLAL 185
A Y R +A ++ G G I+N S+ Q + AAKA + ++T S A
Sbjct: 129 RNAAAYW----RAKAKAAGGPVYGRIVNTSSEAGLVGPVGQANYGAAKAGITALTLSAAR 184
Query: 186 EWGTDYAIRVNGIAP-GPIKDTAGVSKLAPE 215
G Y +R N I P TA V AP+
Sbjct: 185 ALGR-YGVRANAICPRARTAMTADVFGDAPD 214
|
Length = 306 |
| >gnl|CDD|181417 PRK08416, PRK08416, 7-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 67.1 bits (164), Expect = 3e-13
Identities = 67/252 (26%), Positives = 112/252 (44%), Gaps = 25/252 (9%)
Query: 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAA--LHSLGIPAIG 65
+ +KGK +++GG GIG I + + G IA + +A GI A
Sbjct: 4 NEMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKA 63
Query: 66 LEGDVRKREDAVRVVESTINHFGKLDILVNAA-------AGNFLVPAEDLSPNGFRTVIE 118
++ + E + + F ++D ++ A G + L P G I
Sbjct: 64 YPLNILEPETYKELFKKIDEDFDRVDFFISNAIISGRAVVGGY-TKFMRLKPKGLNN-IY 121
Query: 119 IDSVGTFIM-CHEALKYLKKGGRGQASSSSGGIIINISAT--LHYTATWYQIHVSAAKAA 175
+V F++ EA K ++K G GG II++S+T L Y Y H +KAA
Sbjct: 122 TATVNAFVVGAQEAAKRMEKVG--------GGSIISLSSTGNLVYIEN-YAGH-GTSKAA 171
Query: 176 VDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWD 235
V+++ + A E G + IRVN ++ GPI A + EE+++K + + G+ D
Sbjct: 172 VETMVKYAATELG-EKNIRVNAVSGGPIDTDALKAFTNYEEVKAKTEELSPLNRMGQPED 230
Query: 236 IAMAALYLASDA 247
+A A L+L S+
Sbjct: 231 LAGACLFLCSEK 242
|
Length = 260 |
| >gnl|CDD|235608 PRK05786, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 65.9 bits (161), Expect = 5e-13
Identities = 55/194 (28%), Positives = 78/194 (40%), Gaps = 13/194 (6%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
LKGK + G G+G+ ++ K GA + I R + L+ L G + GD
Sbjct: 3 LKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGNIHYVV-GD 61
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
V E A V+E +D LV G E+ S G ++ +
Sbjct: 62 VSSTESARNVIEKAAKVLNAIDGLVVTVGGYVEDTVEEFS--GLEEMLTNHIKIPLYAVN 119
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
+L++LK+G SS GI Y A+ Q+ + AKA + LA E
Sbjct: 120 ASLRFLKEGSSIVLVSSMSGI---------YKASPDQLSYAVAKAGLAKAVEILASEL-L 169
Query: 190 DYAIRVNGIAPGPI 203
IRVNGIAP I
Sbjct: 170 GRGIRVNGIAPTTI 183
|
Length = 238 |
| >gnl|CDD|187595 cd05334, DHPR_SDR_c_like, dihydropteridine reductase (DHPR), classical (c) SDRs | Back alignment and domain information |
|---|
Score = 65.0 bits (159), Expect = 1e-12
Identities = 53/214 (24%), Positives = 76/214 (35%), Gaps = 23/214 (10%)
Query: 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVR 71
+V L+ GG +G + G +A + L A S+ +
Sbjct: 1 ARVVLVYGGRGALGSAVVQAFKSRGWWVASID-----LAENEEADASIIVLDSDSF---- 51
Query: 72 KREDAVRVVESTINHFGKLDILVNAAAG-NFLVPAEDLSPNGFRTVIEIDSVGTFIMCHE 130
E A +VV S GK+D L+ A G + + + + +FI H
Sbjct: 52 -TEQAKQVVASVARLSGKVDALICVAGGWAGGSAKSKSFVKNWDLMWKQNLWTSFIASHL 110
Query: 131 ALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEW-GT 189
A K+L GG ++ A T I AAKAAV +T+SLA E G
Sbjct: 111 ATKHLLSGGL----------LVLTGAKAALEPTPGMIGYGAAKAAVHQLTQSLAAENSGL 160
Query: 190 DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATD 223
N I P + DT K P+ S T
Sbjct: 161 PAGSTANAILPVTL-DTPANRKAMPDADFSSWTP 193
|
Dihydropteridine reductase is an NAD-binding protein related to the SDRs. It converts dihydrobiopterin into tetrahydrobiopterin, a cofactor necessary in catecholamines synthesis. Dihydropteridine reductase has the YXXXK of these tyrosine-dependent oxidoreductases, but lacks the typical upstream Asn and Ser catalytic residues. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 221 |
| >gnl|CDD|187631 cd05373, SDR_c10, classical (c) SDR, subgroup 10 | Back alignment and domain information |
|---|
Score = 64.3 bits (157), Expect = 2e-12
Identities = 47/176 (26%), Positives = 77/176 (43%), Gaps = 9/176 (5%)
Query: 14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRS-AVAALHSLGIPAIGLEGDVRK 72
VA + G G G+G I+ + G ++A+ RR+ L + V + G A + D R
Sbjct: 1 VAAVVGAGDGLGAAIARRFAAEGFSVALAARREAKLEALLVDIIRDAGGSAKAVPTDARD 60
Query: 73 REDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEAL 132
++ + + + G L++LV A N P + +P F V E+ + G F+ EA
Sbjct: 61 EDEVIALFDLIEEEIGPLEVLVYNAGANVWFPILETTPRVFEKVWEMAAFGGFLAAREAA 120
Query: 133 KYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
K + GRG II AT + AK A+ ++ +S+A E G
Sbjct: 121 KRMLARGRGT--------IIFTGATASLRGRAGFAAFAGAKFALRALAQSMARELG 168
|
This subgroup resembles the classical SDRs, but has an incomplete match to the canonical glycine rich NAD-binding motif and lacks the typical active site tetrad (instead of the critical active site Tyr, it has Phe, but contains the nearby Lys). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 238 |
| >gnl|CDD|235725 PRK06179, PRK06179, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 64.5 bits (158), Expect = 3e-12
Identities = 53/194 (27%), Positives = 84/194 (43%), Gaps = 17/194 (8%)
Query: 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDV 70
KVAL+TG SGIG + +L + G + R + A + G+ + L DV
Sbjct: 3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNP----ARAAPIP--GVELLEL--DV 54
Query: 71 RKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHE 130
V+ I G++D+LVN A AE+ S + + + + G M
Sbjct: 55 TDDASVQAAVDEVIARAGRIDVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRA 114
Query: 131 ALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTD 190
L +++ G G+ IINIS+ L + Y +A+K AV+ + SL E
Sbjct: 115 VLPHMRAQGSGR--------IINISSVLGFLPAPYMALYAASKHAVEGYSESLDHEVRQ- 165
Query: 191 YAIRVNGIAPGPIK 204
+ IRV+ + P K
Sbjct: 166 FGIRVSLVEPAYTK 179
|
Length = 270 |
| >gnl|CDD|187583 cd05322, SDH_SDR_c_like, Sorbitol 6-phosphate dehydrogenase (SDH), classical (c) SDRs | Back alignment and domain information |
|---|
Score = 64.0 bits (156), Expect = 4e-12
Identities = 46/206 (22%), Positives = 84/206 (40%), Gaps = 9/206 (4%)
Query: 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMG-RRKTVLRSAVAALHSLGIPAIGLEGD 69
+VA++ GGG +G + L + G +A+ + + A G A G D
Sbjct: 1 MNQVAVVIGGGQTLGEFLCHGLAEAGYDVAVADINSENAEKVADEINAEYGEKAYGFGAD 60
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
+ + + + F ++D+LV +A D F ++++ VG F+
Sbjct: 61 ATNEQSVIALSKGVDEIFKRVDLLVYSAGIAKSAKITDFELGDFDRSLQVNLVGYFLCAR 120
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
E K + + G G II I++ + + SAAK +T+SLAL+
Sbjct: 121 EFSKLMIRDG-------IQGRIIQINSKSGKVGSKHNSGYSAAKFGGVGLTQSLALDLA- 172
Query: 190 DYAIRVNGIAPGPIKDTAGVSKLAPE 215
++ I VN + G + + L P+
Sbjct: 173 EHGITVNSLMLGNLLKSPMFQSLLPQ 198
|
Sorbitol 6-phosphate dehydrogenase (SDH, aka glucitol 6-phosphate dehydrogenase) catalyzes the NAD-dependent interconversion of D-fructose 6-phosphate to D-sorbitol 6-phosphate. SDH is a member of the classical SDRs, with the characteristic catalytic tetrad, but without a complete match to the typical NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257 |
| >gnl|CDD|180949 PRK07370, PRK07370, enoyl-(acyl carrier protein) reductase; Validated | Back alignment and domain information |
|---|
Score = 63.2 bits (154), Expect = 8e-12
Identities = 65/218 (29%), Positives = 91/218 (41%), Gaps = 43/218 (19%)
Query: 10 LKGKVALLTG--GGSGIGFEISLQLGKHGAAIAIM------GRRKTVLRSAVAALHSLGI 61
L GK AL+TG I + I+ QL GA + I GR + +R L+
Sbjct: 4 LTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLN---- 59
Query: 62 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAA--------GNFLVPAEDLSPNGF 113
P++ L DV+ E+ +GKLDILV+ A G+F S GF
Sbjct: 60 PSLFLPCDVQDDAQIEETFETIKQKWGKLDILVHCLAFAGKEELIGDF----SATSREGF 115
Query: 114 RTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH----V 169
+EI + +C A + +GG I+ TL Y I +
Sbjct: 116 ARALEISAYSLAPLCKAAKPLMSEGG---------SIV-----TLTYLGGVRAIPNYNVM 161
Query: 170 SAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTA 207
AKAA+++ R LA E G IRVN I+ GPI+ A
Sbjct: 162 GVAKAALEASVRYLAAELGPK-NIRVNAISAGPIRTLA 198
|
Length = 258 |
| >gnl|CDD|171820 PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed | Back alignment and domain information |
|---|
Score = 63.0 bits (153), Expect = 8e-12
Identities = 66/241 (27%), Positives = 109/241 (45%), Gaps = 22/241 (9%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L G+ AL+TG GIG EI+ L GA + + G R L + A LG +
Sbjct: 4 LSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAA---ELGERVKIFPAN 60
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAA----GNFLVPAEDLSPNGFRTVIEIDSVGTF 125
+ R++ + + +DILVN A G F+ +S + +V+E++ TF
Sbjct: 61 LSDRDEVKALGQKAEADLEGVDILVNNAGITKDGLFV----RMSDEDWDSVLEVNLTATF 116
Query: 126 IMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLAL 185
+ E + + G+ IINI++ + T Q + A+KA + ++SLA
Sbjct: 117 RLTRELTHPMMRRRYGR--------IINITSVVGVTGNPGQANYCASKAGMIGFSKSLAQ 168
Query: 186 EWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245
E T + VN +APG I ++A KL ++ + + + G ++A A YLAS
Sbjct: 169 EIATR-NVTVNCVAPGFI-ESAMTGKLNDKQ-KEAIMGAIPMKRMGTGAEVASAVAYLAS 225
Query: 246 D 246
Sbjct: 226 S 226
|
Length = 245 |
| >gnl|CDD|187586 cd05325, carb_red_sniffer_like_SDR_c, carbonyl reductase sniffer-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 62.7 bits (153), Expect = 9e-12
Identities = 55/194 (28%), Positives = 83/194 (42%), Gaps = 19/194 (9%)
Query: 15 ALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKR- 73
L+TG GIG E+ QL G I R + +AAL + LE DV
Sbjct: 1 VLITGASRGIGLELVRQLLARGNNTVIATCRDPSAATELAALGASHSRLHILELDVTDEI 60
Query: 74 EDAVRVVESTINHFGKLDILV-NAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEAL 132
++ V + LD+L+ NA + PA ++ V +++ +G ++ L
Sbjct: 61 AESAEAVAERL-GDAGLDVLINNAGILHSYGPASEVDSEDLLEVFQVNVLGPLLLTQAFL 119
Query: 133 KYLKKGGRGQASSSSGGIIINISA-----TLHYTATWYQIHVSAAKAAVDSITRSLALEW 187
L KG R IINIS+ + + WY S KAA++ +T+SLA+E
Sbjct: 120 PLLLKGAR--------AKIINISSRVGSIGDNTSGGWYSYRAS--KAALNMLTKSLAVEL 169
Query: 188 GTDYAIRVNGIAPG 201
D I V + PG
Sbjct: 170 KRD-GITVVSLHPG 182
|
Sniffer is an NADPH-dependent carbonyl reductase of the classical SDR family. Studies in Drosophila melanogaster implicate Sniffer in the prevention of neurodegeneration due to aging and oxidative-stress. This subgroup also includes Rhodococcus sp. AD45 IsoH, which is an NAD-dependent 1-hydroxy-2-glutathionyl-2-methyl-3-butene dehydrogenase involved in isoprene metabolism, Aspergillus nidulans StcE encoded by a gene which is part of a proposed sterigmatocystin biosynthesis gene cluster, Bacillus circulans SANK 72073 BtrF encoded by a gene found in the butirosin biosynthesis gene cluster, and Aspergillus parasiticus nor-1 involved in the biosynthesis of aflatoxins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 233 |
| >gnl|CDD|180604 PRK06523, PRK06523, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 63.0 bits (154), Expect = 9e-12
Identities = 69/271 (25%), Positives = 107/271 (39%), Gaps = 71/271 (26%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L GK AL+TGG GIG +L + GA V+ +A + L + D
Sbjct: 7 LAGKRALVTGGTKGIGAATVARLLEAGA---------RVVTTARSRPDDLPEGVEFVAAD 57
Query: 70 VRKREDAVRVVESTINHFGKLDILVN------AAAGNFLVPAED-----LSPNGFRTVIE 118
+ E V + + G +DILV+ A AG F ++ L+ N V
Sbjct: 58 LTTAEGCAAVARAVLERLGGVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAV-R 116
Query: 119 IDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINIS----------ATLHYTATWYQIH 168
+D L G + S G+II+++ +T Y
Sbjct: 117 LDRA------------LLPGMIARGS----GVIIHVTSIQRRLPLPESTTAY-------- 152
Query: 169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAY 228
+AAKAA+ + ++SL+ E +RVN ++PG I+ A V+ LA + TDY A
Sbjct: 153 -AAAKAALSTYSKSLSKEVAPK-GVRVNTVSPGWIETEAAVA-LAERLAEAAGTDYEGAK 209
Query: 229 K-------------FGEKWDIAMAALYLASD 246
+ E ++A +LASD
Sbjct: 210 QIIMDSLGGIPLGRPAEPEEVAELIAFLASD 240
|
Length = 260 |
| >gnl|CDD|180823 PRK07074, PRK07074, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 62.5 bits (152), Expect = 1e-11
Identities = 56/236 (23%), Positives = 98/236 (41%), Gaps = 13/236 (5%)
Query: 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK 72
+ AL+TG GIG ++ + G + + L + AL + D+
Sbjct: 3 RTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDARFVPVAC--DLTD 60
Query: 73 REDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEAL 132
+ + G +D+LV A D +P +R ++ + +C EA+
Sbjct: 61 AASLAAALANAAAERGPVDVLVANAGAARAASLHDTTPASWRADNALNLEAAY-LCVEAV 119
Query: 133 KYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYA 192
S G ++NI +++ A SAAKA + T+ LA+E+G +
Sbjct: 120 -------LEGMLKRSRGAVVNI-GSVNGMAALGHPAYSAAKAGLIHYTKLLAVEYGR-FG 170
Query: 193 IRVNGIAPGPIKDTAGVSKLAPE-EIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247
IR N +APG +K A +++A ++ + + F D+A A L+LAS A
Sbjct: 171 IRANAVAPGTVKTQAWEARVAANPQVFEELKKWYPLQDFATPDDVANAVLFLASPA 226
|
Length = 257 |
| >gnl|CDD|236357 PRK08945, PRK08945, putative oxoacyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 62.2 bits (152), Expect = 1e-11
Identities = 71/256 (27%), Positives = 111/256 (43%), Gaps = 35/256 (13%)
Query: 1 MESPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG 60
M K D+LK ++ L+TG G GIG E +L +HGA + ++GR + L + + + G
Sbjct: 1 MHYQPKPDLLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAG 60
Query: 61 I--PAI---GLEGDVRKREDAVRVVESTINHFGKLD-ILVNAAAGNFLVPAEDLSPNGFR 114
PAI L ++ ++ ++ FG+LD +L NA L P E P ++
Sbjct: 61 GPQPAIIPLDLLT--ATPQNYQQLADTIEEQFGRLDGVLHNAGLLGELGPMEQQDPEVWQ 118
Query: 115 TVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY-TATWYQIHVSAAK 173
V++++ TF++ L L K S + ++ S+ A W VS K
Sbjct: 119 DVMQVNVNATFMLTQALLPLLLK-------SPAASLVFTSSSVGRQGRANWGAYAVS--K 169
Query: 174 AAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSK---ATDYMAAYKF 230
A + + + LA E+ +RVN I PG + TA + P E K D M Y
Sbjct: 170 FATEGMMQVLADEY-QGTNLRVNCINPGGTR-TAMRASAFPGEDPQKLKTPEDIMPLY-- 225
Query: 231 GEKWDIAMAALYLASD 246
LYL D
Sbjct: 226 ----------LYLMGD 231
|
Length = 247 |
| >gnl|CDD|236399 PRK09186, PRK09186, flagellin modification protein A; Provisional | Back alignment and domain information |
|---|
Score = 62.3 bits (152), Expect = 1e-11
Identities = 61/259 (23%), Positives = 98/259 (37%), Gaps = 42/259 (16%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAI-------MGRRKTVLRSAVA-ALHSLGI 61
LKGK L+TG G IG + + + G + + L SL
Sbjct: 2 LKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSL-- 59
Query: 62 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAA---AGNFLVPAEDLSPNGFRTVIE 118
+E D+ +E + + +GK+D VN A ++ D+S + F +
Sbjct: 60 ----VELDITDQESLEEFLSKSAEKYGKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLS 115
Query: 119 IDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL--------HYTATWYQ--IH 168
+ +F+ + KY KK G GG ++NIS+ Y T +
Sbjct: 116 LHLGSSFLFSQQFAKYFKKQG--------GGNLVNISSIYGVVAPKFEIYEGTSMTSPVE 167
Query: 169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAY 228
+A KA + +T+ LA + D IRVN ++PG I D PE +
Sbjct: 168 YAAIKAGIIHLTKYLAKYFK-DSNIRVNCVSPGGILDN------QPEAFLNAYKKCCNGK 220
Query: 229 KFGEKWDIAMAALYLASDA 247
+ DI ++L SD
Sbjct: 221 GMLDPDDICGTLVFLLSDQ 239
|
Length = 256 |
| >gnl|CDD|236099 PRK07791, PRK07791, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 62.0 bits (151), Expect = 2e-11
Identities = 54/204 (26%), Positives = 89/204 (43%), Gaps = 18/204 (8%)
Query: 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAI---------MGRRKTVLRSAVAALHSL 59
+L G+V ++TG G GIG +L GA + + + ++ V + +
Sbjct: 3 LLDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAA 62
Query: 60 GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAA---AGNFLVPAEDLSPNGFRTV 116
G A+ D+ + A +V++ + FG LD+LVN A + ++S + V
Sbjct: 63 GGEAVANGDDIADWDGAANLVDAAVETFGGLDVLVNNAGILRDRMIA---NMSEEEWDAV 119
Query: 117 IEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAV 176
I + G F A Y + +A + IIN S+ + Q + SAAKA +
Sbjct: 120 IAVHLKGHFATLRHAAAYWR--AESKAGRAVDARIINTSSGAGLQGSVGQGNYSAAKAGI 177
Query: 177 DSITRSLALEWGTDYAIRVNGIAP 200
++T A E G Y + VN IAP
Sbjct: 178 AALTLVAAAELGR-YGVTVNAIAP 200
|
Length = 286 |
| >gnl|CDD|180984 PRK07454, PRK07454, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 61.1 bits (149), Expect = 3e-11
Identities = 59/209 (28%), Positives = 93/209 (44%), Gaps = 21/209 (10%)
Query: 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEG 68
+ AL+TG SGIG +L K G +A++ R + L + A L S G+ A
Sbjct: 3 LNSMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSI 62
Query: 69 DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
D+ E + + FG D+L+N A + P ++ + ++ VI+++ F C
Sbjct: 63 DLSNPEAIAPGIAELLEQFGCPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCC 122
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTA--TW--YQIHVSAAKAAVDSITRSLA 184
L ++ G GG+IIN+S+ A W Y +KAA+ + T+ LA
Sbjct: 123 SAVLPGMRARG--------GGLIINVSSIAARNAFPQWGAY----CVSKAALAAFTKCLA 170
Query: 185 LEWGTDYAIRVNGIAPG----PIKDTAGV 209
E + IRV I G P+ DT V
Sbjct: 171 EE-ERSHGIRVCTITLGAVNTPLWDTETV 198
|
Length = 241 |
| >gnl|CDD|169556 PRK08703, PRK08703, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 61.1 bits (148), Expect = 3e-11
Identities = 57/225 (25%), Positives = 92/225 (40%), Gaps = 37/225 (16%)
Query: 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIP---AI 64
L K L+TG G+G +++ GA + ++ R + L A+ G P AI
Sbjct: 2 ATLSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAI 61
Query: 65 GLE----GDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIE-- 118
+ + + A + E+T GKLD +V+ A + LSP F+TV E
Sbjct: 62 RFDLMSAEEKEFEQFAATIAEATQ---GKLDGIVHCAGYFYA-----LSPLDFQTVAEWV 113
Query: 119 ----IDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKA 174
I++V + LK+ S + I + S A W A+KA
Sbjct: 114 NQYRINTVAPMGLTRALFPLLKQ------SPDASVIFVGESHGETPKAYWGGF--GASKA 165
Query: 175 AVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRS 219
A++ + + A EW +R N + PGPI +P+ I+S
Sbjct: 166 ALNYLCKVAADEWERFGNLRANVLVPGPIN--------SPQRIKS 202
|
Length = 239 |
| >gnl|CDD|187604 cd05346, SDR_c5, classical (c) SDR, subgroup 5 | Back alignment and domain information |
|---|
Score = 59.6 bits (145), Expect = 1e-10
Identities = 62/241 (25%), Positives = 102/241 (42%), Gaps = 25/241 (10%)
Query: 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHS-LGIPAIGLEGDVR 71
K L+TG SGIG + + K GA + + GRR L+ L + + + L+ DV
Sbjct: 1 KTVLITGASSGIGEATARRFAKAGAKLILTGRRAERLQELADELGAKFPVKVLPLQLDVS 60
Query: 72 KREDAVRVVESTINHFGKLDILVNAA---AGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
RE +E+ F +DILVN A G L PA++ + T+I+ + G +
Sbjct: 61 DRESIEAALENLPEEFRDIDILVNNAGLALG--LDPAQEADLEDWETMIDTNVKGLLNVT 118
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATL-HYTATWYQIHVSAAKAAVDSITRSLALEW 187
L + +G IIN+ + Y ++ A KAAV + +L +
Sbjct: 119 RLILPIMIARNQGH--------IINLGSIAGRYPYAGGNVY-CATKAAVRQFSLNLRKDL 169
Query: 188 GTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKW---DIAMAALYLA 244
IRV I PG ++ + + ++ ++ Y+ E DIA L++A
Sbjct: 170 -IGTGIRVTNIEPGLVETEFSLVRFHGDKEKADKV-----YEGVEPLTPEDIAETILWVA 223
Query: 245 S 245
S
Sbjct: 224 S 224
|
These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249 |
| >gnl|CDD|180448 PRK06182, PRK06182, short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 59.6 bits (145), Expect = 1e-10
Identities = 56/196 (28%), Positives = 83/196 (42%), Gaps = 23/196 (11%)
Query: 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK 72
KVAL+TG SGIG + +L G + RR + L SLG+ + L DV
Sbjct: 4 KVALVTGASSGIGKATARRLAAQGYTVYGAARRV----DKMEDLASLGVHPLSL--DVTD 57
Query: 73 REDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEAL 132
V++ I G++D+LVN A ED+ + R E++ G + L
Sbjct: 58 EASIKAAVDTIIAEEGRIDVLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVL 117
Query: 133 KYLKKGGRGQASSSSGGIIINISAT----LHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
+++ G+ IINIS+ WY A K A++ + +L LE
Sbjct: 118 PHMRAQRSGR--------IINISSMGGKIYTPLGAWYH----ATKFALEGFSDALRLEVA 165
Query: 189 TDYAIRVNGIAPGPIK 204
+ I V I PG IK
Sbjct: 166 -PFGIDVVVIEPGGIK 180
|
Length = 273 |
| >gnl|CDD|187614 cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxysteroid dehydrogenases (17beta-HSDs) types -1, -3, and -12, -like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 59.2 bits (144), Expect = 1e-10
Identities = 42/180 (23%), Positives = 74/180 (41%), Gaps = 16/180 (8%)
Query: 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHS-LGIPAIGLEGDV 70
G A++TG GIG + +L K G + ++ R + L + + G+ + D
Sbjct: 1 GTWAVVTGATDGIGKAYAEELAKRGFNVILISRTQEKLDAVAKEIEEKYGVETKTIAADF 60
Query: 71 RKREDAVRVVESTINHFGKLDI--LVNAAAGNFLVPAE--DLSPNGFRTVIEIDSVGTFI 126
+D +E + LDI LVN + +P + + + +I ++ + T
Sbjct: 61 SAGDDIYERIEKELEG---LDIGILVNNVGISHSIPEYFLETPEDELQDIINVNVMATLK 117
Query: 127 MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALE 186
M L + K + G I+NIS+ T SA+KA +D +R+L E
Sbjct: 118 MTRLILPGMVKRKK--------GAIVNISSFAGLIPTPLLATYSASKAFLDFFSRALYEE 169
|
This subgroup includes various 17-beta-hydroxysteroid dehydrogenases and 3-ketoacyl-CoA reductase, these are members of the SDR family, and contain the canonical active site tetrad and glycine-rich NAD-binding motif of the classical SDRs. 3-ketoacyl-CoA reductase (KAR, aka 17beta-HSD type 12, encoded by HSD17B12) acts in fatty acid elongation; 17beta- hydroxysteroid dehydrogenases are isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. 17beta-estradiol dehydrogenase (aka 17beta-HSD type 1, encoded by HSD17B1) converts estrone to estradiol. Estradiol is the predominant female sex hormone. 17beta-HSD type 3 (aka testosterone 17-beta-dehydrogenase 3, encoded by HSD17B3) catalyses the reduction of androstenedione to testosterone, it also accepts estrogens as substrates. This subgroup also contains a putative steroid dehydrogenase let-767 from Caenorhabditis elegans, mutation in which results in hypersensitivity to cholesterol limitation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239 |
| >gnl|CDD|235631 PRK05866, PRK05866, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 59.8 bits (145), Expect = 2e-10
Identities = 60/234 (25%), Positives = 94/234 (40%), Gaps = 40/234 (17%)
Query: 4 PFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPA 63
P + L GK LLTG SGIG + Q + GA + + RR+ +L + + G A
Sbjct: 32 PRQPVDLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDA 91
Query: 64 IGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVG 123
+ + D+ + +V G +DIL+N A + P + S + + D
Sbjct: 92 MAVPCDLSDLDAVDALVADVEKRIGGVDILINNAGRSIRRPLAE-SLDRWH-----DVER 145
Query: 124 TFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW------------YQIHVSA 171
T ++ + A L +G G IIN+ ATW Y A
Sbjct: 146 TMVLNYYAPLRLIRGLAPGMLERGDGHIINV-------ATWGVLSEASPLFSVYN----A 194
Query: 172 AKAAVDSITRSLALEWG-------TDY--AIRVNGIAPGPIKDTAGVSKLAPEE 216
+KAA+ +++R + EWG T Y + IA P K G+ L +E
Sbjct: 195 SKAALSAVSRVIETEWGDRGVHSTTLYYPLVATPMIA--PTKAYDGLPALTADE 246
|
Length = 293 |
| >gnl|CDD|235962 PRK07201, PRK07201, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 59.6 bits (145), Expect = 2e-10
Identities = 27/88 (30%), Positives = 42/88 (47%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L GKV L+TG SGIG ++++ + GA + ++ R L VA + + G A D
Sbjct: 369 LVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYTCD 428
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAA 97
+ V+ + G +D LVN A
Sbjct: 429 LTDSAAVDHTVKDILAEHGHVDYLVNNA 456
|
Length = 657 |
| >gnl|CDD|181136 PRK07825, PRK07825, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 58.4 bits (142), Expect = 4e-10
Identities = 47/216 (21%), Positives = 81/216 (37%), Gaps = 21/216 (9%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L+GKV +TGG GIG + L GA +AI + + + A L +G D
Sbjct: 3 LRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELG----LVVGGPLD 58
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
V +++ G +D+LVN A + P D R +++++ G +
Sbjct: 59 VTDPASFAAFLDAVEADLGPIDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSK 118
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
A + GRG ++N+++ A+K AV T + LE
Sbjct: 119 LAAPRMVPRGRGH--------VVNVASLAGKIPVPGMATYCASKHAVVGFTDAARLELR- 169
Query: 190 DYAIRVNGIAPG--------PIKDTAGVSKLAPEEI 217
+ V+ + P G + PE++
Sbjct: 170 GTGVHVSVVLPSFVNTELIAGTGGAKGFKNVEPEDV 205
|
Length = 273 |
| >gnl|CDD|236372 PRK09072, PRK09072, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 58.4 bits (142), Expect = 4e-10
Identities = 46/197 (23%), Positives = 77/197 (39%), Gaps = 23/197 (11%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
LK K LLTG GIG ++ L GA + ++GR L A+AA + D
Sbjct: 3 LKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLE-ALAARLPYPGRHRWVVAD 61
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
+ E V + G +++L+N A N ED P ++ ++ +
Sbjct: 62 LTS-EAGREAVLARAREMGGINVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTR 120
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLH------YTATWYQIHVSAAKAAVDSITRSL 183
L L+ +++N+ +T Y + Y A+K A+ + +L
Sbjct: 121 ALLPLLRAQPS--------AMVVNVGSTFGSIGYPGYAS--Y----CASKFALRGFSEAL 166
Query: 184 ALEWGTDYAIRVNGIAP 200
E D +RV +AP
Sbjct: 167 RREL-ADTGVRVLYLAP 182
|
Length = 263 |
| >gnl|CDD|180458 PRK06194, PRK06194, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 58.1 bits (141), Expect = 5e-10
Identities = 26/96 (27%), Positives = 43/96 (44%), Gaps = 3/96 (3%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
GKVA++TG SG G + G + + ++ L AVA L + G +G+ D
Sbjct: 4 FAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTD 63
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAA---AGNFL 102
V + ++ + FG + +L N A AG +
Sbjct: 64 VSDAAQVEALADAALERFGAVHLLFNNAGVGAGGLV 99
|
Length = 287 |
| >gnl|CDD|181334 PRK08263, PRK08263, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 58.1 bits (141), Expect = 5e-10
Identities = 52/196 (26%), Positives = 86/196 (43%), Gaps = 22/196 (11%)
Query: 12 GKVALLTGGGSGIGF---EISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEG 68
KV +TG G G E +L+ G A A R T + +A + + + L
Sbjct: 3 EKVWFITGASRGFGRAWTEAALERGDRVVATA----RDTATLADLAEKYGDRLLPLAL-- 56
Query: 69 DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
DV R VE+ + HFG+LDI+VN A E+++ + R I+ + G +
Sbjct: 57 DVTDRAAVFAAVETAVEHFGRLDIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVT 116
Query: 129 HEALKYLKKGGRGQ--ASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALE 186
L YL++ G SS GGI + ++ A+K A++ ++ +LA E
Sbjct: 117 QAVLPYLREQRSGHIIQISSIGGISAFPMSGIY----------HASKWALEGMSEALAQE 166
Query: 187 WGTDYAIRVNGIAPGP 202
++ I+V + PG
Sbjct: 167 -VAEFGIKVTLVEPGG 181
|
Length = 275 |
| >gnl|CDD|130890 TIGR01831, fabG_rel, 3-oxoacyl-(acyl-carrier-protein) reductase, putative | Back alignment and domain information |
|---|
Score = 57.6 bits (139), Expect = 5e-10
Identities = 64/235 (27%), Positives = 105/235 (44%), Gaps = 18/235 (7%)
Query: 16 LLTGGGSGIGFEISLQLGKHGAAIAIMGRR-KTVLRSAVAALHSLGIPAIGLEGDVRKRE 74
L+TG GIG I+ +L G I + ++ S V+A+ + G A L+ DV R
Sbjct: 2 LVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRV 61
Query: 75 DAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEA--- 131
++E+ I G +V A LS + VI + G + + H
Sbjct: 62 ACRTLLEADIAEHGAYYGVVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMP 121
Query: 132 LKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDY 191
+ ++GGR +S G++ N Q++ SAAKA + T++LA+E
Sbjct: 122 MIRARQGGRIITLASVSGVMGNRG----------QVNYSAAKAGLIGATKALAVELAKR- 170
Query: 192 AIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246
I VN IAPG I DT ++++ E +A + + G+ ++A A +L SD
Sbjct: 171 KITVNCIAPGLI-DTEMLAEV--EHDLDEALKTVPMNRMGQPAEVASLAGFLMSD 222
|
This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239 |
| >gnl|CDD|187636 cd08931, SDR_c9, classical (c) SDR, subgroup 9 | Back alignment and domain information |
|---|
Score = 57.5 bits (139), Expect = 5e-10
Identities = 55/199 (27%), Positives = 88/199 (44%), Gaps = 19/199 (9%)
Query: 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK 72
K +TG SGIG E +L ++G + + + L + A L + + A L DV
Sbjct: 1 KAIFITGAASGIGRETALLFARNGWFVGLYDIDEDGLAALAAELGAENVVAGAL--DVTD 58
Query: 73 RED-AVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEA 131
R A + + G+LD L N A P ED+ +++I+ G + A
Sbjct: 59 RAAWAAALADFAAATGGRLDALFNNAGVGRGGPFEDVPLAAHDRMVDINVKGVLNGAYAA 118
Query: 132 LKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHV---SAAKAAVDSITRSLALEWG 188
L YLK + G +IN +++ +A + Q + SA K AV +T +L +EW
Sbjct: 119 LPYLKA--------TPGARVINTASS---SAIYGQPDLAVYSATKFAVRGLTEALDVEW- 166
Query: 189 TDYAIRVNGIAPGPIKDTA 207
+ IRV + P + DT
Sbjct: 167 ARHGIRVADVWPWFV-DTP 184
|
This subgroup has the canonical active site tetrad and NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 227 |
| >gnl|CDD|135637 PRK05876, PRK05876, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 56.5 bits (136), Expect = 1e-09
Identities = 38/134 (28%), Positives = 63/134 (47%)
Query: 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLE 67
D G+ A++TGG SGIG + + GA + + K LR AV L + G G+
Sbjct: 2 DGFPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVM 61
Query: 68 GDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIM 127
DVR RE+ + + G +D++ + A P +++ + +R VI++D G+
Sbjct: 62 CDVRHREEVTHLADEAFRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHT 121
Query: 128 CHEALKYLKKGGRG 141
L L + G G
Sbjct: 122 VEAFLPRLLEQGTG 135
|
Length = 275 |
| >gnl|CDD|183797 PRK12859, PRK12859, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 55.9 bits (135), Expect = 2e-09
Identities = 64/250 (25%), Positives = 100/250 (40%), Gaps = 27/250 (10%)
Query: 10 LKGKVALLTGGG--SGIGFEISLQLGKHGAAIAIM-----------GRRKTVLRSAVAAL 56
LK KVA++TG GIG I +L + GA I G + L
Sbjct: 4 LKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEEL 63
Query: 57 HSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTV 116
G+ +E D+ + + ++ G ILVN AA + +L+
Sbjct: 64 LKNGVKVSSMELDLTQNDAPKELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKH 123
Query: 117 IEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAV 176
++ T ++ + + K SGG IIN+++ ++ +A K A+
Sbjct: 124 YMVNVRATTLLSSQFARGFDKK--------SGGRIINMTSGQFQGPMVGELAYAATKGAI 175
Query: 177 DSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDI 236
D++T SLA E I VN I PGP DT ++ EEI+ + GE D
Sbjct: 176 DALTSSLAAEVAH-LGITVNAINPGP-TDTGWMT----EEIKQGLLPMFPFGRIGEPKDA 229
Query: 237 AMAALYLASD 246
A +LAS+
Sbjct: 230 ARLIKFLASE 239
|
Length = 256 |
| >gnl|CDD|187666 cd09806, type1_17beta-HSD-like_SDR_c, human estrogenic 17beta-hydroxysteroid dehydrogenase type 1 (type 1 17beta-HSD)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 55.9 bits (135), Expect = 2e-09
Identities = 60/219 (27%), Positives = 97/219 (44%), Gaps = 22/219 (10%)
Query: 13 KVALLTGGGSGIGFEISLQLG----KHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEG 68
V L+TG SGIG ++++L K A M K R AA G L+
Sbjct: 1 TVVLITGCSSGIGLHLAVRLASDPSKRFKVYATMRDLKKKGRLWEAAGALAGGTLETLQL 60
Query: 69 DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
DV + VE +D+LV A L P E LS + +V +++ GT M
Sbjct: 61 DVCDSKSVAAAVERVTE--RHVDVLVCNAGVGLLGPLEALSEDAMASVFDVNVFGTVRML 118
Query: 129 HEALKYLKKGGRGQ--ASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALE 186
L +K+ G G+ +SS GG+ L + + A+K A++ + SLA++
Sbjct: 119 QAFLPDMKRRGSGRILVTSSVGGL-----QGLPFNDVY-----CASKFALEGLCESLAVQ 168
Query: 187 WGTDYAIRVNGIAPGPIKDTAGVSKL--APEEIRSKATD 223
+ + ++ I GP+ TA + K+ +PEE+ + D
Sbjct: 169 L-LPFNVHLSLIECGPVH-TAFMEKVLGSPEEVLDRTAD 205
|
17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical SDR subgroup includes human type 1 17beta-HSD, human retinol dehydrogenase 8, zebrafish photoreceptor associated retinol dehydrogenase type 2, and a chicken ovary-specific 17beta-hydroxysteroid dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258 |
| >gnl|CDD|187592 cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydrozybenzoate dehydrogenases, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 55.6 bits (134), Expect = 3e-09
Identities = 56/244 (22%), Positives = 91/244 (37%), Gaps = 30/244 (12%)
Query: 15 ALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVL--RSAVAALHSLGIPAIGLEGDVRK 72
++TG GIG ++ L + GA + + +L L L DV
Sbjct: 1 VIVTGAAQGIGRAVARHLLQAGATVIALDLPFVLLLEYGDPLRLTPL---------DVAD 51
Query: 73 REDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEAL 132
V + G +D LVN A + LS + ++ G F +
Sbjct: 52 AAAVREVCSRLLAEHGPIDALVNCAGVLRPGATDPLSTEDWEQTFAVNVTGVFNLLQAVA 111
Query: 133 KYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYA 192
++K G I+ +++ + A+KAA+ S+++ L LE Y
Sbjct: 112 PHMKDRR--------TGAIVTVASNAAHVPRISMAAYGASKAALASLSKCLGLELA-PYG 162
Query: 193 IRVNGIAPGPIKDTAGVSKLAPEE------IRSKATDY---MAAYKFGEKWDIAMAALYL 243
+R N ++PG DTA L +E I + + K + DIA A L+L
Sbjct: 163 VRCNVVSPGS-TDTAMQRTLWHDEDGAAQVIAGVPEQFRLGIPLGKIAQPADIANAVLFL 221
Query: 244 ASDA 247
ASD
Sbjct: 222 ASDQ 225
|
2,3 dihydro-2,3 dihydrozybenzoate dehydrogenase shares the characteristics of the classical SDRs. This subgroup includes Escherichai coli EntA which catalyzes the NAD+-dependent oxidation of 2,3-dihydro-2,3-dihydroxybenzoate to 2,3-dihydroxybenzoate during biosynthesis of the siderophore Enterobactin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244 |
| >gnl|CDD|180744 PRK06914, PRK06914, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 55.8 bits (135), Expect = 3e-09
Identities = 55/199 (27%), Positives = 86/199 (43%), Gaps = 24/199 (12%)
Query: 11 KGKVALLTGGGSGIGFEISLQLGKHG-AAIAIMGR--RKTVLRSAVAALHSLG-IPAIGL 66
K+A++TG SG G +L+L K G IA M ++ L S L+ I L
Sbjct: 2 NKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQL 61
Query: 67 EGDVRKREDAVRVVESTINHFGKLDILVN---AAAGNFLVPAEDLSPNGFRTVIEIDSVG 123
DV ++++ + + G++D+LVN A G F E++ +R E + G
Sbjct: 62 --DVTD-QNSIHNFQLVLKEIGRIDLLVNNAGYANGGF---VEEIPVEEYRKQFETNVFG 115
Query: 124 TFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA-TWYQIHVSAAKAAVDSITRS 182
+ L Y++K G IINIS+ +VS +K A++ + S
Sbjct: 116 AISVTQAVLPYMRK--------QKSGKIINISSISGRVGFPGLSPYVS-SKYALEGFSES 166
Query: 183 LALEWGTDYAIRVNGIAPG 201
L LE + I V I PG
Sbjct: 167 LRLEL-KPFGIDVALIEPG 184
|
Length = 280 |
| >gnl|CDD|236389 PRK09134, PRK09134, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 55.7 bits (135), Expect = 3e-09
Identities = 51/204 (25%), Positives = 82/204 (40%), Gaps = 37/204 (18%)
Query: 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAA-LHSLGIPAIGLEGDVR 71
+ AL+TG IG I+L L HG +A+ R A+AA + +LG A+ L+ D+
Sbjct: 10 RAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLA 69
Query: 72 KREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEA 131
+ +V G + +LVN A+ A + + + + F++
Sbjct: 70 DEAEVRALVARASAALGPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAF 129
Query: 132 LKYLKKGGRGQASSSSGGIIINI-------------SATLHYTATWYQIHVSAAKAAVDS 178
+ L R G+++N+ S TL +KAA+ +
Sbjct: 130 ARALPADAR--------GLVVNMIDQRVWNLNPDFLSYTL-------------SKAALWT 168
Query: 179 ITRSLALEWGTDYAIRVNGIAPGP 202
TR+LA IRVN I PGP
Sbjct: 169 ATRTLAQALAPR--IRVNAIGPGP 190
|
Length = 258 |
| >gnl|CDD|180617 PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 55.0 bits (133), Expect = 4e-09
Identities = 58/245 (23%), Positives = 92/245 (37%), Gaps = 37/245 (15%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAA-IAIMGRRKTVLRSAVAALHSLGIPAIGLEG 68
K L+TG SGIG + GA + + K L L +
Sbjct: 3 FMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPDLSGNFHFL----------QL 52
Query: 69 DVRKREDAVRVVESTINHFGKLDILVNAAAGNFL---VPAEDLSPNGFRTVIEIDSVGTF 125
D+ +E + +DIL N A L P D S ++ + + + TF
Sbjct: 53 DLSDD------LEPLFDWVPSVDILCNTAG--ILDDYKPLLDTSLEEWQHIFDTNLTSTF 104
Query: 126 IMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLAL 185
++ L + + G IIIN+ + + A +A+K A+ T+ LAL
Sbjct: 105 LLTRAYLPQMLERKSG--------IIINMCSIASFVAGGGGAAYTASKHALAGFTKQLAL 156
Query: 186 EWGTDYA---IRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALY 242
DYA I+V GIAPG +K + P + ++ E ++A L+
Sbjct: 157 ----DYAKDGIQVFGIAPGAVKTPMTAADFEPGGLADWVARETPIKRWAEPEEVAELTLF 212
Query: 243 LASDA 247
LAS
Sbjct: 213 LASGK 217
|
Length = 235 |
| >gnl|CDD|235703 PRK06125, PRK06125, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 55.1 bits (133), Expect = 4e-09
Identities = 63/253 (24%), Positives = 102/253 (40%), Gaps = 34/253 (13%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL-GIPAIGLEG 68
L GK L+TG GIG + G + ++ R L + A L + G+
Sbjct: 5 LAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHAL 64
Query: 69 DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPA---EDLSPNGFRTVIEIDSVGTF 125
D+ E ++ G +DILVN A +P +D+ +R E+ G
Sbjct: 65 DLSSPEAREQLAAEA----GDIDILVNNAGA---IPGGGLDDVDDAAWRAGWELKVFGYI 117
Query: 126 IMCHEALKYLKKGGRGQASSSSGGIIINI--SATLHYTATWYQIHVSAAKAAVDSITRSL 183
+ A +K RG G+I+N+ +A + A + I SA AA+ + TR+L
Sbjct: 118 DLTRLAYPRMK--ARG------SGVIVNVIGAAGENPDADY--ICGSAGNAALMAFTRAL 167
Query: 184 ALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIR------SKATDYMAAYKFG---EKW 234
+ D +RV G+ PGP+ T + L R S+ + +A G
Sbjct: 168 GGK-SLDDGVRVVGVNPGPVA-TDRMLTLLKGRARAELGDESRWQELLAGLPLGRPATPE 225
Query: 235 DIAMAALYLASDA 247
++A +LAS
Sbjct: 226 EVADLVAFLASPR 238
|
Length = 259 |
| >gnl|CDD|226476 COG3967, DltE, Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Score = 54.7 bits (132), Expect = 5e-09
Identities = 56/223 (25%), Positives = 88/223 (39%), Gaps = 32/223 (14%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAI-GLEG 68
G L+TGG SGIG ++ + + G + I GR + L A A P I
Sbjct: 3 TTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAE-----NPEIHTEVC 57
Query: 69 DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLS--PNGFRTV---IEIDSVG 123
DV R+ +VE + L++L+N A + EDL+ + I + +
Sbjct: 58 DVADRDSRRELVEWLKKEYPNLNVLINNAG---IQRNEDLTGAEDLLDDAEQEIATNLLA 114
Query: 124 TFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSL 183
+ L +L + IIN+S+ L + A KAA+ S T +L
Sbjct: 115 PIRLTALLLPHLLR--------QPEATIINVSSGLAFVPMASTPVYCATKAAIHSYTLAL 166
Query: 184 ALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMA 226
E D ++ V +AP P+ DT E ++A M
Sbjct: 167 R-EQLKDTSVEVIELAP-PLVDT--------TEGNTQARGKMP 199
|
Length = 245 |
| >gnl|CDD|237189 PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 54.7 bits (132), Expect = 5e-09
Identities = 59/250 (23%), Positives = 99/250 (39%), Gaps = 27/250 (10%)
Query: 10 LKGKVALLTGG--GSGIGFEISLQLGKHGAAI---------AIMGRRKTVLRSAV--AAL 56
L K+AL+TG +GIG + +L G I M + +
Sbjct: 3 LMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEI 62
Query: 57 HSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTV 116
S G+ +E D+ + RV + G IL+N AA + E+L+
Sbjct: 63 ESYGVRCEHMEIDLSQPYAPNRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKH 122
Query: 117 IEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAV 176
++ T ++ K Q +GG IIN+++ ++ +A K A+
Sbjct: 123 YAVNVRATMLLSSAFAK--------QYDGKAGGRIINLTSGQSLGPMPDELAYAATKGAI 174
Query: 177 DSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDI 236
++ T+SLA E + I VN + PGP DT ++ EE++ + GE D
Sbjct: 175 EAFTKSLAPELA-EKGITVNAVNPGPT-DTGWIT----EELKHHLVPKFPQGRVGEPVDA 228
Query: 237 AMAALYLASD 246
A +L S+
Sbjct: 229 ARLIAFLVSE 238
|
Length = 256 |
| >gnl|CDD|212497 cd11731, Lin1944_like_SDR_c, Lin1944 and related proteins, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 54.1 bits (131), Expect = 6e-09
Identities = 42/217 (19%), Positives = 71/217 (32%), Gaps = 34/217 (15%)
Query: 15 ALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKRE 74
++ G IG ++ L HG + GR S G + D+
Sbjct: 1 IIVIGATGTIGLAVAQLLSAHGHEVITAGR-------------SSGDYQV----DITDEA 43
Query: 75 DAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKY 134
+ E G D +V+ A P +L+ F+ + +G + L Y
Sbjct: 44 SIKALFEKV----GHFDAIVSTAGDAEFAPLAELTDADFQRGLNSKLLGQINLVRHGLPY 99
Query: 135 LKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIR 194
L + GG I S L + A++ R+ A+E IR
Sbjct: 100 L----------NDGGSITLTSGILAQRPIPGGAAAATVNGALEGFVRAAAIELPRG--IR 147
Query: 195 VNGIAPGPIKDTAGVSK-LAPEEIRSKATDYMAAYKF 230
+N ++PG ++++ P A D AY
Sbjct: 148 INAVSPGVVEESLEAYGDFFPGFEPVPAEDVAKAYVR 184
|
Lin1944 protein from Listeria Innocua is a classical SDR, it contains a glycine-rich motif similar to the canonical motif of the SDR NAD(P)-binding site. However, the typical SDR active site residues are absent in this subgroup of proteins of undetermined function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 198 |
| >gnl|CDD|187625 cd05367, SPR-like_SDR_c, sepiapterin reductase (SPR)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 54.6 bits (132), Expect = 6e-09
Identities = 49/222 (22%), Positives = 91/222 (40%), Gaps = 24/222 (10%)
Query: 14 VALLTGGGSGIGFEISLQLGKHGAAI--AIMGRRKTVLRSAVAALHSLGIPAIGLEGDVR 71
V +LTG GIG ++ +L K G+ ++ R + L+ L G+ ++ D+
Sbjct: 1 VIILTGASRGIGRALAEELLKRGSPSVVVLLARSEEPLQELKEELRP-GLRVTTVKADLS 59
Query: 72 KREDAVRVVESTINHFGKLDILV-NAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHE 130
+++E+ G+ D+L+ NA + + E + + + +++ +
Sbjct: 60 DAAGVEQLLEAIRKLDGERDLLINNAGSLGPVSKIEFIDLDELQKYFDLNLTSPVCLTST 119
Query: 131 ALKYLKKGGRGQASSSSGGIIINIS--ATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
L+ KK ++N+S A ++ W ++KAA D R LA E
Sbjct: 120 LLRAFKK-------RGLKKTVVNVSSGAAVNPFKGW--GLYCSSKAARDMFFRVLAAE-- 168
Query: 189 TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKF 230
+ +RV APG + DT EIR + D +F
Sbjct: 169 -EPDVRVLSYAPGVV-DTDMQR-----EIRETSADPETRSRF 203
|
Human SPR, a member of the SDR family, catalyzes the NADP-dependent reduction of sepiaptern to 7,8-dihydrobiopterin (BH2). In addition to SPRs, this subgroup also contains Bacillus cereus yueD, a benzil reductase, which catalyzes the stereospecific reduction of benzil to (S)-benzoin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 241 |
| >gnl|CDD|180446 PRK06180, PRK06180, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 54.5 bits (132), Expect = 8e-09
Identities = 56/207 (27%), Positives = 80/207 (38%), Gaps = 27/207 (13%)
Query: 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGR-----RKTVLRSAVAALHSLGIPAIGL 66
K L+TG SG G ++ AA+A R R R+ ALH A+
Sbjct: 4 MKTWLITGVSSGFGRALA------QAALAAGHRVVGTVRSEAARADFEALH--PDRALAR 55
Query: 67 EGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFI 126
DV + VV FG +D+LVN A E+ R E++ G
Sbjct: 56 LLDVTDFDAIDAVVADAEATFGPIDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVA 115
Query: 127 MCHEALKYLKKGGRGQ--ASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLA 184
M L ++ RG +S GG+I +Y + K A++ I+ SLA
Sbjct: 116 MTKAVLPGMRARRRGHIVNITSMGGLITM-PGIGYYCGS---------KFALEGISESLA 165
Query: 185 LEWGTDYAIRVNGIAPGPIK-DTAGVS 210
E + I V + PG + D AG S
Sbjct: 166 KEVA-PFGIHVTAVEPGSFRTDWAGRS 191
|
Length = 277 |
| >gnl|CDD|131732 TIGR02685, pter_reduc_Leis, pteridine reductase | Back alignment and domain information |
|---|
Score = 54.5 bits (131), Expect = 8e-09
Identities = 50/205 (24%), Positives = 92/205 (44%), Gaps = 20/205 (9%)
Query: 14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIP--AIGLEGDVR 71
A++TG IG I++ L + G + + R S +AA + P A+ + D+
Sbjct: 3 AAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLS 62
Query: 72 KREDAVRVVESTIN----HFGKLDILVNAAAGNF---LVPAEDLSPNGFRTVIEI----- 119
E+ I+ FG+ D+LVN A+ + L+ + G + +E+
Sbjct: 63 NSATLFSRCEAIIDACFRAFGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAEL 122
Query: 120 ---DSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAV 176
+++ + + +A + G R + S++ I+ A + ++ + AK A+
Sbjct: 123 FGSNAIAPYFLI-KAFAQRQAGTRAEQRSTNLSIVNLCDAMTDQPLLGFTMY-TMAKHAL 180
Query: 177 DSITRSLALEWGTDYAIRVNGIAPG 201
+ +TRS ALE IRVNG+APG
Sbjct: 181 EGLTRSAALELAP-LQIRVNGVAPG 204
|
Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family. Length = 267 |
| >gnl|CDD|168204 PRK05717, PRK05717, oxidoreductase; Validated | Back alignment and domain information |
|---|
Score = 54.1 bits (130), Expect = 9e-09
Identities = 68/242 (28%), Positives = 107/242 (44%), Gaps = 22/242 (9%)
Query: 12 GKVALLTGGGSGIGFEISLQLGKHG--AAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
G+VAL+TG GIG I+ L G +A + R + S VA +LG A + D
Sbjct: 10 GRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERG---SKVAK--ALGENAWFIAMD 64
Query: 70 VRKREDAVRVVESTINHFGKLDILV-NAAAGN-FLVPAEDLSPNGFRTVIEIDSVGTFIM 127
V V + FG+LD LV NAA + E LS + V+ ++ G ++
Sbjct: 65 VADEAQVAAGVAEVLGQFGRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLL 124
Query: 128 CHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEW 187
YL+ + G I+N+++T + +A+K + ++T +LA+
Sbjct: 125 AKHCAPYLR---------AHNGAIVNLASTRARQSEPDTEAYAASKGGLLALTHALAISL 175
Query: 188 GTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIA-MAALYLASD 246
G + IRVN ++PG I D S+ E + A + G D+A M A L+
Sbjct: 176 GPE--IRVNAVSPGWI-DARDPSQRRAEPLSEADHAQHPAGRVGTVEDVAAMVAWLLSRQ 232
Query: 247 AG 248
AG
Sbjct: 233 AG 234
|
Length = 255 |
| >gnl|CDD|181335 PRK08264, PRK08264, short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 53.7 bits (130), Expect = 1e-08
Identities = 61/219 (27%), Positives = 83/219 (37%), Gaps = 36/219 (16%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
+KGKV L+TG GIG QL GAA R +V L +P L+ D
Sbjct: 4 IKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDP---ESVTDLGPRVVP---LQLD 57
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPA--EDLSPNGFRTVIEIDSVGTFIM 127
V E + ILVN AG F + + + R +E + G M
Sbjct: 58 VTDPASVAAAAE----AASDVTILVN-NAGIFRTGSLLLEGDEDALRAEMETNYFGPLAM 112
Query: 128 CHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHV----SAAKAAVDSITRSL 183
L G GG I+N+ +W SA+KAA S+T++L
Sbjct: 113 ARAFAPVLAANG--------GGAIVNV----LSVLSWVNFPNLGTYSASKAAAWSLTQAL 160
Query: 184 ALEWGTDYAIRVNGIAPGPIKDT-----AGVSKLAPEEI 217
E RV G+ PGPI DT K +P ++
Sbjct: 161 RAELA-PQGTRVLGVHPGPI-DTDMAAGLDAPKASPADV 197
|
Length = 238 |
| >gnl|CDD|181113 PRK07775, PRK07775, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 54.0 bits (130), Expect = 1e-08
Identities = 49/204 (24%), Positives = 82/204 (40%), Gaps = 12/204 (5%)
Query: 15 ALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKRE 74
AL+ G SGIG +++L G +A+ RR V + + G A+ DV +
Sbjct: 13 ALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPD 72
Query: 75 DAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKY 134
V G++++LV+ A + ++S F + ++I VG + L
Sbjct: 73 SVKSFVAQAEEALGEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLP- 131
Query: 135 LKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEW-GTDYAI 193
G G +I S + AAKA ++++ +L +E GT +
Sbjct: 132 ------GMIERRRGDLIFVGSDVALRQRPHMGAYG-AAKAGLEAMVTNLQMELEGT--GV 182
Query: 194 RVNGIAPGPIKDTAGVSKLAPEEI 217
R + + PGP G S L E I
Sbjct: 183 RASIVHPGPTLTGMGWS-LPAEVI 205
|
Length = 274 |
| >gnl|CDD|187535 cd02266, SDR, Short-chain dehydrogenases/reductases (SDR) | Back alignment and domain information |
|---|
Score = 52.1 bits (125), Expect = 2e-08
Identities = 44/207 (21%), Positives = 68/207 (32%), Gaps = 54/207 (26%)
Query: 15 ALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKRE 74
L+TGG GIG I+ L G+
Sbjct: 1 VLVTGGSGGIGGAIARWLASRGS------------------------------------- 23
Query: 75 DAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKY 134
V VV + D++V+ AA DL+ + I + VGT + A +
Sbjct: 24 PKVLVVS-------RRDVVVHNAAILDDGRLIDLTGSRIERAIRANVVGTRRLLEAAREL 76
Query: 135 LKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIR 194
+K G+ I IS+ +A+KAA+D + + A E G +
Sbjct: 77 MKAKRLGR--------FILISSVAGLFGAPGLGGYAASKAALDGLAQQWASE-GWGNGLP 127
Query: 195 VNGIAPGPIKDTAGVS-KLAPEEIRSK 220
+A G + +APEEI
Sbjct: 128 ATAVACGTWAGSGMAKGPVAPEEILGN 154
|
SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase (KR) domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 186 |
| >gnl|CDD|180669 PRK06720, PRK06720, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 51.5 bits (123), Expect = 3e-08
Identities = 32/88 (36%), Positives = 51/88 (57%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L GKVA++TGGG GIG +L L K GA + + + ++ V + +LG A+ + D
Sbjct: 14 LAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYD 73
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAA 97
+ K+ D RV+ T+N F ++D+L A
Sbjct: 74 MEKQGDWQRVISITLNAFSRIDMLFQNA 101
|
Length = 169 |
| >gnl|CDD|235736 PRK06196, PRK06196, oxidoreductase; Provisional | Back alignment and domain information |
|---|
Score = 52.4 bits (126), Expect = 4e-08
Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 4/89 (4%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L GK A++TGG SG+G E + L + GA + + RR V R A+A + + + + L
Sbjct: 24 LSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGIDGVEVVMLDLADL 83
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAA 98
R A R ++S ++DIL+N A
Sbjct: 84 ESVRAFAERFLDSG----RRIDILINNAG 108
|
Length = 315 |
| >gnl|CDD|181126 PRK07806, PRK07806, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 52.0 bits (125), Expect = 5e-08
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 2/92 (2%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVA-ALHSLGIPAIGLEG 68
L GK AL+TG GIG + + L GA + + R+K + V + + G A +
Sbjct: 4 LPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGA 63
Query: 69 DVRKREDAVRVVESTINHFGKLDILV-NAAAG 99
D+ E ++++ FG LD LV NA+ G
Sbjct: 64 DLTDEESVAALMDTAREEFGGLDALVLNASGG 95
|
Length = 248 |
| >gnl|CDD|171822 PRK12938, PRK12938, acetyacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Score = 51.6 bits (123), Expect = 6e-08
Identities = 59/235 (25%), Positives = 98/235 (41%), Gaps = 12/235 (5%)
Query: 13 KVALLTGGGSGIGFEISLQLGKHG-AAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVR 71
++A +TGG GIG I +L K G +A G + +LG I EG+V
Sbjct: 4 RIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVG 63
Query: 72 KREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEA 131
+ + G++D+LVN A V ++ + VI+ + F + +
Sbjct: 64 DWDSTKAAFDKVKAEVGEIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQV 123
Query: 132 LKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDY 191
+ + + G G+ IINIS+ + Q + S AKA + T SLA E T
Sbjct: 124 IDGMVERGWGR--------IINISSVNGQKGQFGQTNYSTAKAGIHGFTMSLAQEVATK- 174
Query: 192 AIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246
+ VN ++PG I + K ++ K + + G +I +LAS+
Sbjct: 175 GVTVNTVSPGYI--GTDMVKAIRPDVLEKIVATIPVRRLGSPDEIGSIVAWLASE 227
|
Length = 246 |
| >gnl|CDD|187612 cd05354, SDR_c7, classical (c) SDR, subgroup 7 | Back alignment and domain information |
|---|
Score = 50.9 bits (122), Expect = 1e-07
Identities = 52/228 (22%), Positives = 85/228 (37%), Gaps = 24/228 (10%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAI-GLEG 68
+K K L+TG GIG L HGA R + A L + + L
Sbjct: 1 IKDKTVLVTGANRGIGKAFVESLLAHGAKKVYAAVRDP---GSAAHLVAKYGDKVVPLRL 57
Query: 69 DVRKREDAVRVVESTINHFGKLDILV-NAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIM 127
DV E +++ +D+++ NA E+ + + ++++ G +
Sbjct: 58 DVTDPES----IKAAAAQAKDVDVVINNAGVLKPATLLEEGALEALKQEMDVNVFGLLRL 113
Query: 128 CHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEW 187
LK G G I+N+++ SA+K+A S+T+ L E
Sbjct: 114 AQAFAPVLKANGGGA--------IVNLNSVASLKNFPAMGTYSASKSAAYSLTQGLRAEL 165
Query: 188 GTDYAIRVNGIAPGPIKDT-----AGVSKLAPEEIRSKATDYMAAYKF 230
V + PGPI DT AG K +PE + + A +F
Sbjct: 166 A-AQGTLVLSVHPGPI-DTRMAAGAGGPKESPETVAEAVLKALKAGEF 211
|
These proteins are members of the classical SDR family, with a canonical active site triad (and also an active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 235 |
| >gnl|CDD|178331 PLN02730, PLN02730, enoyl-[acyl-carrier-protein] reductase | Back alignment and domain information |
|---|
Score = 50.9 bits (122), Expect = 1e-07
Identities = 44/137 (32%), Positives = 59/137 (43%), Gaps = 21/137 (15%)
Query: 78 RVVESTINHFGKLDILVNAAAGNFLV--PAEDLSPNGFRTVIEIDSVGTFIMCHEALKYL 135
V ES FG +DILV++ A V P + S G+ I S + +
Sbjct: 109 EVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQHFGPIM 168
Query: 136 KKGGRGQASSSSGGIIINISATLHYTAT-----WYQIHVSAAKAAVDSITRSLALEWGTD 190
GG S +L Y A+ Y +S+AKAA++S TR LA E G
Sbjct: 169 NPGGA--------------SISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRK 214
Query: 191 YAIRVNGIAPGPIKDTA 207
Y IRVN I+ GP+ A
Sbjct: 215 YKIRVNTISAGPLGSRA 231
|
Length = 303 |
| >gnl|CDD|182531 PRK10538, PRK10538, malonic semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Score = 50.1 bits (120), Expect = 2e-07
Identities = 55/204 (26%), Positives = 82/204 (40%), Gaps = 33/204 (16%)
Query: 14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKR 73
+ L+TG +G G I+ + + G + GRR+ L+ LG + DVR R
Sbjct: 2 IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKD---ELGDNLYIAQLDVRNR 58
Query: 74 EDAVRVVESTINHFGKLDILVNAAAGNF-LVPAEDLSPNGFRTVIEIDSVGTFIMCHEAL 132
++ S + +D+LVN A L PA S + T+I+ ++ G M L
Sbjct: 59 AAIEEMLASLPAEWRNIDVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVL 118
Query: 133 KYLKKGGRGQASSSSGGIIINISATLHYTATW-------YQIHVSAAKAAVDSITRSLAL 185
+ + G IINI +T +W Y A KA V R +L
Sbjct: 119 PGMVERNHGH--------IINIGST---AGSWPYAGGNVY----GATKAFV----RQFSL 159
Query: 186 EWGTDY---AIRVNGIAPGPIKDT 206
TD A+RV I PG + T
Sbjct: 160 NLRTDLHGTAVRVTDIEPGLVGGT 183
|
Length = 248 |
| >gnl|CDD|181298 PRK08219, PRK08219, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 49.2 bits (118), Expect = 4e-07
Identities = 48/196 (24%), Positives = 77/196 (39%), Gaps = 25/196 (12%)
Query: 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK 72
AL+TG GIG I+ +L + GR L A L A D+
Sbjct: 4 PTALITGASRGIGAAIARELAPTHTLLL-GGRPAERLDELAAELPG----ATPFPVDLTD 58
Query: 73 REDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEAL 132
E + + + G+LD+LV+ A L P + + + +R +E++ V + L
Sbjct: 59 PEA----IAAAVEQLGRLDVLVHNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLL 114
Query: 133 KYLKKGGRGQASSSSGGIIINISATLHYTATW--YQIHVSAAKAAVDSITRSLALEWGTD 190
L + G + IN A L W Y +A+K A+ ++ +L E
Sbjct: 115 PAL-RAAHGHV------VFINSGAGLRANPGWGSY----AASKFALRALADALREEEPG- 162
Query: 191 YAIRVNGIAPGPIKDT 206
+RV + PG DT
Sbjct: 163 -NVRVTSVHPGRT-DT 176
|
Length = 227 |
| >gnl|CDD|181020 PRK07533, PRK07533, enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 49.2 bits (118), Expect = 4e-07
Identities = 54/191 (28%), Positives = 82/191 (42%), Gaps = 29/191 (15%)
Query: 69 DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDL-------SPNGFRTVIEIDS 121
DVR+ V +G+LD L+++ A P EDL S GF +++ S
Sbjct: 68 DVREPGQLEAVFARIAEEWGRLDFLLHSIA---FAPKEDLHGRVVDCSREGFALAMDV-S 123
Query: 122 VGTFI-MCHEALKYLKKGGRGQASSSSGG--IIINISATLHYTATWYQIHVSAAKAAVDS 178
+FI M A + GG S G ++ N Y + + KAA++S
Sbjct: 124 CHSFIRMARLAEPLMTNGGSLLTMSYYGAEKVVEN-----------YNL-MGPVKAALES 171
Query: 179 ITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP-EEIRSKATDYMAAYKFGEKWDIA 237
R LA E G IRV+ I+PGP+K T S + + + A + + + D+
Sbjct: 172 SVRYLAAELG-PKGIRVHAISPGPLK-TRAASGIDDFDALLEDAAERAPLRRLVDIDDVG 229
Query: 238 MAALYLASDAG 248
A +LASDA
Sbjct: 230 AVAAFLASDAA 240
|
Length = 258 |
| >gnl|CDD|235628 PRK05855, PRK05855, short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 49.6 bits (119), Expect = 5e-07
Identities = 57/231 (24%), Positives = 86/231 (37%), Gaps = 23/231 (9%)
Query: 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVR 71
GK+ ++TG GSGIG E +L + GA + + + + G A DV
Sbjct: 315 GKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVS 374
Query: 72 KREDAVRVVESTINHFGKLDILVNAA----AGNFLVPAEDLSPNGFRTVIEIDSVGTFIM 127
+ E G DI+VN A AG FL D S + V++++ + I
Sbjct: 375 DADAMEAFAEWVRAEHGVPDIVVNNAGIGMAGGFL----DTSAEDWDRVLDVN-LWGVIH 429
Query: 128 CHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEW 187
GR +GG I+N+++ Y + + +KAAV ++ L E
Sbjct: 430 GCRLF------GRQMVERGTGGHIVNVASAAAYAPSRSLPAYATSKAAVLMLSECLRAEL 483
Query: 188 GTDYAIRVNGIAPG----PIKDT---AGVSKLAPEEIRSKATDYMAAYKFG 231
I V I PG I T AG R +A +G
Sbjct: 484 A-AAGIGVTAICPGFVDTNIVATTRFAGADAEDEARRRGRADKLYQRRGYG 533
|
Length = 582 |
| >gnl|CDD|214833 smart00822, PKS_KR, This enzymatic domain is part of bacterial polyketide synthases | Back alignment and domain information |
|---|
Score = 48.2 bits (116), Expect = 5e-07
Identities = 26/109 (23%), Positives = 45/109 (41%), Gaps = 4/109 (3%)
Query: 13 KVALLTGGGSGIGFEISLQLGKHGAA-IAIMGRRKTVLRSA---VAALHSLGIPAIGLEG 68
L+TGG G+G ++ L + GA + ++ R A +A L + G +
Sbjct: 1 GTYLITGGLGGLGRALARWLAERGARRLVLLSRSGPDAPGAAALLAELEAAGARVTVVAC 60
Query: 69 DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVI 117
DV R+ V+ + G L +++AA L+P F V+
Sbjct: 61 DVADRDALAAVLAAIPAVEGPLTGVIHAAGVLDDGVLASLTPERFAAVL 109
|
It catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 180 |
| >gnl|CDD|169389 PRK08339, PRK08339, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 48.3 bits (115), Expect = 8e-07
Identities = 63/254 (24%), Positives = 108/254 (42%), Gaps = 30/254 (11%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG-IPAIGLEG 68
L GK+A T GIGF ++ L + GA + ++ R + L+ A + S + +
Sbjct: 6 LSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVA 65
Query: 69 DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
D+ KRED R V+ N G+ DI + G ++S + +++ +
Sbjct: 66 DLTKREDLERTVKELKN-IGEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLT 124
Query: 129 HEALKYLKKGGRGQ-ASSSSGGI---IINISATLHYTATWYQIHVSAAKAAVDSITRSLA 184
+ +++ G G+ S+S I I NI+ + + + ++ + R+LA
Sbjct: 125 RALVPAMERKGFGRIIYSTSVAIKEPIPNIALS------------NVVRISMAGLVRTLA 172
Query: 185 LEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK----------FGEKW 234
E G I VNGI PG I+ T V +LA + + + A + GE
Sbjct: 173 KELGP-KGITVNGIMPGIIR-TDRVIQLAQDRAKREGKSVEEALQEYAKPIPLGRLGEPE 230
Query: 235 DIAMAALYLASDAG 248
+I +LASD G
Sbjct: 231 EIGYLVAFLASDLG 244
|
Length = 263 |
| >gnl|CDD|235914 PRK07041, PRK07041, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 48.1 bits (115), Expect = 9e-07
Identities = 63/233 (27%), Positives = 96/233 (41%), Gaps = 26/233 (11%)
Query: 16 LLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKRED 75
L+ GG SGIG ++ GA + I R + L +A AL G P D+ E
Sbjct: 1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGG-GAPVRTAALDIT-DEA 58
Query: 76 AVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYL 135
AV ++ G D +V AA P L + ++ G A +
Sbjct: 59 AV---DAFFAEAGPFDHVVITAADTPGGPVRALPLAAAQAAMDSKFWG-------AYRVA 108
Query: 136 KKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRV 195
+ A + GG + +S + + A AA++++ R LALE +RV
Sbjct: 109 R-----AARIAPGGSLTFVSGFAAVRPSASGVLQGAINAALEALARGLALELA---PVRV 160
Query: 196 NGIAPGPIKDTAGVSKLAPEEIRSKATDYMA----AYKFGEKWDIAMAALYLA 244
N ++PG + DT SKLA + R A A + G+ D+A A L+LA
Sbjct: 161 NTVSPGLV-DTPLWSKLAGDA-REAMFAAAAERLPARRVGQPEDVANAILFLA 211
|
Length = 230 |
| >gnl|CDD|181416 PRK08415, PRK08415, enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 48.2 bits (115), Expect = 1e-06
Identities = 63/210 (30%), Positives = 89/210 (42%), Gaps = 28/210 (13%)
Query: 9 ILKGKVALLTG--GGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGL 66
I+KGK L+ G I + I+ + GA +A + + + LG +
Sbjct: 2 IMKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELGSDYV-Y 60
Query: 67 EGDVRKREDAVRVVESTINHFGKLDILVNAAA--------GNFLVPAEDLSPNGFRTVIE 118
E DV K E + ES GK+D +V++ A G+FL + S F +E
Sbjct: 61 ELDVSKPEHFKSLAESLKKDLGKIDFIVHSVAFAPKEALEGSFL----ETSKEAFNIAME 116
Query: 119 IDSVGTFIMCHEALK-YLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVD 177
I SV + I AL L G S GG+ HY + AKAA++
Sbjct: 117 I-SVYSLIELTRALLPLLNDGASVLTLSYLGGV----KYVPHYNV------MGVAKAALE 165
Query: 178 SITRSLALEWGTDYAIRVNGIAPGPIKDTA 207
S R LA++ G IRVN I+ GPIK A
Sbjct: 166 SSVRYLAVDLGKK-GIRVNAISAGPIKTLA 194
|
Length = 274 |
| >gnl|CDD|235776 PRK06300, PRK06300, enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 48.3 bits (115), Expect = 1e-06
Identities = 39/137 (28%), Positives = 60/137 (43%), Gaps = 21/137 (15%)
Query: 79 VVESTINHFGKLDILVNAAAGNFLV--PAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLK 136
V E FG +DILV++ A + + P + S G+ + S + +
Sbjct: 109 VAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLSHFGPIMN 168
Query: 137 KGGRGQASSSSGGIIINISATLHYTATW-----YQIHVSAAKAAVDSITRSLALEWGTDY 191
GG + +L Y A+ Y +S+AKAA++S T+ LA E G +
Sbjct: 169 PGGS--------------TISLTYLASMRAVPGYGGGMSSAKAALESDTKVLAWEAGRRW 214
Query: 192 AIRVNGIAPGPIKDTAG 208
IRVN I+ GP+ AG
Sbjct: 215 GIRVNTISAGPLASRAG 231
|
Length = 299 |
| >gnl|CDD|187656 cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup 2, complex (x) SDRs | Back alignment and domain information |
|---|
Score = 46.6 bits (111), Expect = 5e-06
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 6/95 (6%)
Query: 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAA-IAIMGRR-----KTVLRSAVAALHSLGIP 62
+ G V L+TGG GIG ++ L + A + ++GR + +AAL +LG
Sbjct: 202 LKPGGVYLVTGGAGGIGRALARALARRYGARLVLLGRSPLPPEEEWKAQTLAALEALGAR 261
Query: 63 AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAA 97
+ + DV R++E +G +D +++AA
Sbjct: 262 VLYISADVTDAAAVRRLLEKVRERYGAIDGVIHAA 296
|
Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. This subfamily includes both KR domains of the Bacillus subtilis Pks J,-L, and PksM, and all three KR domains of PksN, components of the megacomplex bacillaene synthase, which synthesizes the antibiotic bacillaene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 436 |
| >gnl|CDD|235713 PRK06139, PRK06139, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 46.6 bits (111), Expect = 5e-06
Identities = 54/206 (26%), Positives = 84/206 (40%), Gaps = 19/206 (9%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L G V ++TG SGIG + + GA + + R + L++ +LG + + D
Sbjct: 5 LHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTD 64
Query: 70 VRKREDAVRVVESTINHF-GKLDILVN----AAAGNFLVPAEDLSPNGFRTVIEIDSVGT 124
V D V+ + + F G++D+ VN A G F E+ VI+ + +G
Sbjct: 65 V-TDADQVKALATQAASFGGRIDVWVNNVGVGAVGRF----EETPIEAHEQVIQTNLIGY 119
Query: 125 FIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLA 184
H AL KK G GI IN+ + + A Y SA+K + + +L
Sbjct: 120 MRDAHAALPIFKKQGH--------GIFINMISLGGFAAQPYAAAYSASKFGLRGFSEALR 171
Query: 185 LEWGTDYAIRVNGIAPGPIKDTAGVS 210
E I V + P DT G
Sbjct: 172 GELADHPDIHVCDVYPA-FMDTPGFR 196
|
Length = 330 |
| >gnl|CDD|219957 pfam08659, KR, KR domain | Back alignment and domain information |
|---|
Score = 44.8 bits (107), Expect = 8e-06
Identities = 22/106 (20%), Positives = 44/106 (41%), Gaps = 4/106 (3%)
Query: 16 LLTGGGSGIGFEISLQLGKHGAA-IAIMGRRKTVL---RSAVAALHSLGIPAIGLEGDVR 71
L+TGG G+G E++ L + GA + ++ R + +A L + G + DV
Sbjct: 4 LVTGGLGGLGLELARWLAERGARHLVLLSRSGAPDPEAEALLAELEARGAEVTVVACDVS 63
Query: 72 KREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVI 117
R+ ++ L +++AA +++ F V+
Sbjct: 64 DRDAVRALLAEIRADGPPLRGVIHAAGVLRDALLANMTAEDFARVL 109
|
This enzymatic domain is part of bacterial polyketide synthases and catalyzes the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 181 |
| >gnl|CDD|181044 PRK07577, PRK07577, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 45.1 bits (107), Expect = 8e-06
Identities = 56/242 (23%), Positives = 91/242 (37%), Gaps = 31/242 (12%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
+ + L+TG GIG +SL+L G + + R P D
Sbjct: 1 MSSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAID-----------DFPGELFACD 49
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
+ E + +D +VN P + + V +++ +
Sbjct: 50 LADIEQTAATLAQINEIHP-VDAIVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQ 108
Query: 130 EALKYLKKGGRGQASSSSGGIIINI-SATLH--YTATWYQIHVSAAKAAVDSITRSLALE 186
L+ +K +G+ I+NI S + T Y SAAK+A+ TR+ ALE
Sbjct: 109 AFLEGMKLREQGR--------IVNICSRAIFGALDRTSY----SAAKSALVGCTRTWALE 156
Query: 187 WGTDYAIRVNGIAPGPIKDTAGVSKLAP--EEIRSKATDYMAAYKFGEKWDIAMAALYLA 244
Y I VN +APGPI +T + P E + + + G ++A A +L
Sbjct: 157 LAE-YGITVNAVAPGPI-ETELFRQTRPVGSEEEKRVLASIPMRRLGTPEEVAAAIAFLL 214
Query: 245 SD 246
SD
Sbjct: 215 SD 216
|
Length = 234 |
| >gnl|CDD|183714 PRK12742, PRK12742, oxidoreductase; Provisional | Back alignment and domain information |
|---|
Score = 44.7 bits (106), Expect = 1e-05
Identities = 60/244 (24%), Positives = 91/244 (37%), Gaps = 31/244 (12%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAA---LHSLGIPAIGL 66
GK L+ GG GIG I + GA + T S AA G A+
Sbjct: 4 FTGKKVLVLGGSRGIGAAIVRRFVTDGANVRF-----TYAGSKDAAERLAQETGATAVQT 58
Query: 67 EGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFI 126
+ R V + G LDILV A A +L + + +I+ +
Sbjct: 59 DSADRDA------VIDVVRKSGALDILVVNAGIAVFGDALELDADDIDRLFKINIHAPYH 112
Query: 127 MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALE 186
EA + + +GGR S G + ++ Y A+ K+A+ + R LA +
Sbjct: 113 ASVEAARQMPEGGRIIIIGSVNGDRMPVAGMAAYAAS---------KSALQGMARGLARD 163
Query: 187 WGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKAT--DYMAAYKFGEKWDIAMAALYLA 244
+G I +N + PGPI DT P K +MA + G ++A +LA
Sbjct: 164 FG-PRGITINVVQPGPI-DT----DANPANGPMKDMMHSFMAIKRHGRPEEVAGMVAWLA 217
Query: 245 SDAG 248
Sbjct: 218 GPEA 221
|
Length = 237 |
| >gnl|CDD|212495 cd09807, retinol-DH_like_SDR_c, retinol dehydrogenases (retinol-DHs), classical (c) SDRs | Back alignment and domain information |
|---|
Score = 44.8 bits (106), Expect = 1e-05
Identities = 41/155 (26%), Positives = 69/155 (44%), Gaps = 22/155 (14%)
Query: 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVR 71
GK ++TG +GIG E + +L + GA + IM R + + AA I L +V
Sbjct: 1 GKTVIITGANTGIGKETARELARRGARV-IMACRD-MAKCEEAAAE---IRRDTLNHEVI 55
Query: 72 KRE------DAVR-VVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGT 124
R ++R + +LD+L+N AG P + +GF ++ +G
Sbjct: 56 VRHLDLASLKSIRAFAAEFLAEEDRLDVLIN-NAGVMRCP-YSKTEDGFEMQFGVNHLGH 113
Query: 125 FIMCHEALKYLKKGGRGQASSSSGGIIINISATLH 159
F++ + L LKK S+ I+N+S+ H
Sbjct: 114 FLLTNLLLDLLKK--------SAPSRIVNVSSLAH 140
|
Classical SDR-like subgroup containing retinol-DHs and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 274 |
| >gnl|CDD|181139 PRK07832, PRK07832, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 44.6 bits (106), Expect = 2e-05
Identities = 45/210 (21%), Positives = 86/210 (40%), Gaps = 16/210 (7%)
Query: 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG-IPAIGLEGDVR 71
K +TG SGIG +L+L GA + + R L VA +LG D+
Sbjct: 1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDIS 60
Query: 72 KREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEA 131
+ G +D+++N A + + L+ +R +++++ +G +
Sbjct: 61 DYDAVAAFAADIHAAHGSMDVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETF 120
Query: 132 LKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDY 191
+ + GR GG ++N+S+ A + SA+K + ++ L + +
Sbjct: 121 VPPMVAAGR-------GGHLVNVSSAAGLVALPWHAAYSASKFGLRGLSEVLRFDLAR-H 172
Query: 192 AIRVNGIAPGPIK-------DTAGVSKLAP 214
I V+ + PG +K + AGV + P
Sbjct: 173 GIGVSVVVPGAVKTPLVNTVEIAGVDREDP 202
|
Length = 272 |
| >gnl|CDD|181324 PRK08251, PRK08251, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 44.2 bits (105), Expect = 2e-05
Identities = 50/201 (24%), Positives = 81/201 (40%), Gaps = 24/201 (11%)
Query: 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK---TVLRSAVAALHSLGIPAIGLEGD 69
+ L+TG SG+G ++ + G +A+ RR L++ + A + GI D
Sbjct: 3 QKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYP-GIKVAVAALD 61
Query: 70 VRKREDAVRVVESTINHFGKLD-ILVNAAAGNFLVPAEDLSPNGF---RTVIEIDSVGTF 125
V + V + G LD ++VNA G L F + E + V
Sbjct: 62 VNDHDQVFEVFAEFRDELGGLDRVIVNAGIGK----GARLGTGKFWANKATAETNFVAAL 117
Query: 126 IMCHEALKYLKKGGRGQASSSSGGIIINISAT--LHYTATWYQIHVSAAKAAVDSITRSL 183
C A++ ++ G G +I ++SA L Y +A+KA V S+ L
Sbjct: 118 AQCEAAMEIFREQGSGHLV-----LISSVSAVRGLPGVKAAY----AASKAGVASLGEGL 168
Query: 184 ALEWGTDYAIRVNGIAPGPIK 204
E I+V+ I PG I+
Sbjct: 169 RAE-LAKTPIKVSTIEPGYIR 188
|
Length = 248 |
| >gnl|CDD|180766 PRK06940, PRK06940, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 44.2 bits (105), Expect = 2e-05
Identities = 67/268 (25%), Positives = 106/268 (39%), Gaps = 51/268 (19%)
Query: 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK 72
+V ++ G G GIG I+ ++G G + + + L +A L G E DV
Sbjct: 3 EVVVVIGAG-GIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSS 60
Query: 73 REDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEAL 132
RE +V+ + +T G + LV+ A + P++ SP ++++D GT ++ E
Sbjct: 61 RE-SVKALAATAQTLGPVTGLVHTAG---VSPSQ-ASP---EAILKVDLYGTALVLEEFG 112
Query: 133 KYLKKGGRGQASSSSGG-----IIINISATLHYTAT-------------------WYQIH 168
K + GG G +S G + L T T YQI
Sbjct: 113 KVIAPGGAGVVIASQSGHRLPALTAEQERALATTPTEELLSLPFLQPDAIEDSLHAYQI- 171
Query: 169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYM--- 225
AK A + A++WG A R+N I+PG I + LA +E+ D
Sbjct: 172 ---AKRANALRVMAEAVKWGERGA-RINSISPGII-----STPLAQDELNGPRGDGYRNM 222
Query: 226 ----AAYKFGEKWDIAMAALYLASDAGQ 249
A + G +IA A +L G
Sbjct: 223 FAKSPAGRPGTPDEIAALAEFLMGPRGS 250
|
Length = 275 |
| >gnl|CDD|235910 PRK07024, PRK07024, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 43.8 bits (104), Expect = 3e-05
Identities = 49/193 (25%), Positives = 80/193 (41%), Gaps = 19/193 (9%)
Query: 17 LTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDA 76
+TG SGIG ++ + + GA + ++ RR L++ A L ++ DVR +
Sbjct: 7 ITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAARVSV-YAADVRDADAL 65
Query: 77 VRVVESTINHFGKLDILV-NA--AAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALK 133
I G D+++ NA + G EDL+ FR V++ + G +
Sbjct: 66 AAAAADFIAAHGLPDVVIANAGISVGTLTEEREDLA--VFREVMDTNYFGMVATFQPFIA 123
Query: 134 YLKKGGRGQ--ASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDY 191
++ RG +S G+ L + SA+KAA SL +E
Sbjct: 124 PMRAARRGTLVGIASVAGV-----RGLPGAGAY-----SASKAAAIKYLESLRVELR-PA 172
Query: 192 AIRVNGIAPGPIK 204
+RV IAPG I+
Sbjct: 173 GVRVVTIAPGYIR 185
|
Length = 257 |
| >gnl|CDD|187669 cd09809, human_WWOX_like_SDR_c-like, human WWOX (WW domain-containing oxidoreductase)-like, classical (c)-like SDRs | Back alignment and domain information |
|---|
Score = 43.0 bits (101), Expect = 6e-05
Identities = 32/121 (26%), Positives = 58/121 (47%), Gaps = 10/121 (8%)
Query: 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAAL----HSLGIPAIGLE 67
GKV ++TG SGIGFE + HGA + + R + +AV+ + H + A+ L+
Sbjct: 1 GKVIIITGANSGIGFETARSFALHGAHVILACRNMSRASAAVSRILEEWHKARVEAMTLD 60
Query: 68 -GDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFI 126
+R + ++ + L +LV A F +P L+ +G T +++ +G F
Sbjct: 61 LASLRSVQRFAEAFKAKNSP---LHVLV-CNAAVFALPWT-LTEDGLETTFQVNHLGHFY 115
Query: 127 M 127
+
Sbjct: 116 L 116
|
Classical-like SDR domain of human WWOX and related proteins. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 284 |
| >gnl|CDD|236124 PRK07889, PRK07889, enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 42.6 bits (101), Expect = 8e-05
Identities = 59/213 (27%), Positives = 91/213 (42%), Gaps = 35/213 (16%)
Query: 9 ILKGKVALLTG--GGSGIGFEISLQLGKHGAAIAI--MGRRKTVLRSAVAALHSLGIPAI 64
+L+GK L+TG S I F ++ + GA + + GR + L PA
Sbjct: 4 LLEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAK---RLPEPAP 60
Query: 65 GLEGDVRKREDAVRVVESTINHFGKLDILVNAAA--------GNFL-VPAEDLSPNGFRT 115
LE DV E + + H LD +V++ GNFL P ED++ T
Sbjct: 61 VLELDVTNEEHLASLADRVREHVDGLDGVVHSIGFAPQSALGGNFLDAPWEDVA-----T 115
Query: 116 VIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA-TWYQIHVSAAKA 174
+ + + +LK L K + + ++ AT+ + A W + AKA
Sbjct: 116 ALHVSAY--------SLKSLAKALLPLMNEGGSIVGLDFDATVAWPAYDW----MGVAKA 163
Query: 175 AVDSITRSLALEWGTDYAIRVNGIAPGPIKDTA 207
A++S R LA + G IRVN +A GPI+ A
Sbjct: 164 ALESTNRYLARDLGPR-GIRVNLVAAGPIRTLA 195
|
Length = 256 |
| >gnl|CDD|180343 PRK05993, PRK05993, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 42.7 bits (101), Expect = 8e-05
Identities = 52/194 (26%), Positives = 85/194 (43%), Gaps = 18/194 (9%)
Query: 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK 72
+ L+TG SGIG + L G + R++ VAAL + G+ A L D +
Sbjct: 5 RSILITGCSSGIGAYCARALQSDGWRVFATCRKE----EDVAALEAEGLEAFQL--DYAE 58
Query: 73 REDAVRVVESTINHF-GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEA 131
E +V + G+LD L N A EDL R E + G +
Sbjct: 59 PESIAALVAQVLELSGGRLDALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRV 118
Query: 132 LKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEW-GTD 190
+ ++K G+G+ I+ S+ L Y+ +A+K A++ ++ +L +E G+
Sbjct: 119 IPVMRKQGQGR--------IVQCSSILGLVPMKYRGAYNASKFAIEGLSLTLRMELQGSG 170
Query: 191 YAIRVNGIAPGPIK 204
I V+ I PGPI+
Sbjct: 171 --IHVSLIEPGPIE 182
|
Length = 277 |
| >gnl|CDD|168186 PRK05693, PRK05693, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 42.5 bits (100), Expect = 9e-05
Identities = 51/191 (26%), Positives = 79/191 (41%), Gaps = 16/191 (8%)
Query: 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK 72
V L+TG SGIG ++ G + R+ V AL + G A+ L DV
Sbjct: 2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKA----EDVEALAAAGFTAVQL--DVND 55
Query: 73 REDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEAL 132
R+ E G LD+L+N A + P D R E + V + AL
Sbjct: 56 GAALARLAEELEAEHGGLDVLINNAGYGAMGPLLDGGVEAMRRQFETN-VFAVVGVTRAL 114
Query: 133 KYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYA 192
L + R G+++NI + T + A+KAAV +++ +L LE +
Sbjct: 115 FPLLRRSR--------GLVVNIGSVSGVLVTPFAGAYCASKAAVHALSDALRLELAP-FG 165
Query: 193 IRVNGIAPGPI 203
++V + PG I
Sbjct: 166 VQVMEVQPGAI 176
|
Length = 274 |
| >gnl|CDD|169390 PRK08340, PRK08340, glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 42.1 bits (99), Expect = 1e-04
Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 4/83 (4%)
Query: 16 LLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG-IPAIGLEGDVRKRE 74
L+T GIGF ++ +L K GA + I R + L A+ L G + A+ + D+ ++
Sbjct: 4 LVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYGEVYAV--KADLSDKD 61
Query: 75 DAVRVVESTINHFGKLDILV-NA 96
D +V+ G +D LV NA
Sbjct: 62 DLKNLVKEAWELLGGIDALVWNA 84
|
Length = 259 |
| >gnl|CDD|233441 TIGR01500, sepiapter_red, sepiapterin reductase | Back alignment and domain information |
|---|
Score = 41.8 bits (98), Expect = 1e-04
Identities = 49/208 (23%), Positives = 80/208 (38%), Gaps = 25/208 (12%)
Query: 14 VALLTGGGSGIGFEISLQLGK----HGAAIAIMGRRKTVLRSAVAALHS----LGIPAIG 65
V L+TG G G I+ +L K G+ + + R LR A + + L + +
Sbjct: 2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVS 61
Query: 66 LE-GDVRKREDAVRVVESTI--NHFGKLDILVNAAA-GNFLVPAEDLSPNGFRTVIEIDS 121
L+ G E ++ + +L ++ NA G+ DLS + +
Sbjct: 62 LDLGAEAGLEQLLKALRELPRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALN 121
Query: 122 VGTFI-MCHEALKYLKKGGRGQASSSSGGIIINIS--ATLHYTATWYQIHVSAAKAAVDS 178
+ + + + LK K S ++NIS + W A KAA D
Sbjct: 122 LTSMLCLTSSVLKAFKD------SPGLNRTVVNISSLCAIQPFKGW--ALYCAGKAARDM 173
Query: 179 ITRSLALEWGTDYAIRVNGIAPGPIKDT 206
+ + LALE +RV APG + DT
Sbjct: 174 LFQVLALEEKNP-NVRVLNYAPGVL-DT 199
|
This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs. Length = 256 |
| >gnl|CDD|235813 PRK06482, PRK06482, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 41.6 bits (98), Expect = 2e-04
Identities = 46/158 (29%), Positives = 73/158 (46%), Gaps = 11/158 (6%)
Query: 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALH--SLGIPAIGLEGD 69
K +TG SG G ++ +L G +A RR L + A + L + L+ D
Sbjct: 2 SKTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDD-LKARYGDRLWV----LQLD 56
Query: 70 VRKREDAVR-VVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
V AVR VV+ G++D++V+ A AE+LS R I+ + +G+ +
Sbjct: 57 VTD-SAAVRAVVDRAFAALGRIDVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVI 115
Query: 129 HEALKYLKK--GGRGQASSSSGGIIINISATLHYTATW 164
AL +L++ GGR SS GG I +L++ W
Sbjct: 116 RAALPHLRRQGGGRIVQVSSEGGQIAYPGFSLYHATKW 153
|
Length = 276 |
| >gnl|CDD|180596 PRK06505, PRK06505, enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 41.7 bits (98), Expect = 2e-04
Identities = 58/221 (26%), Positives = 91/221 (41%), Gaps = 46/221 (20%)
Query: 8 DILKGKVALLTG--GGSGIGFEISLQLGKHGAAIAI------MGRRKTVLRSAVAALHSL 59
+++GK L+ G I + I+ QL GA +A +G+R L ++ +
Sbjct: 3 GLMQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESLGS---- 58
Query: 60 GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAE------DLSPNGF 113
L DV V E+ +GKLD +V+A F E D + F
Sbjct: 59 ---DFVLPCDVEDIASVDAVFEALEKKWGKLDFVVHAIG--FSDKNELKGRYADTTRENF 113
Query: 114 -RTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW-----YQI 167
RT++ I C + K R GG ++ TL Y + Y +
Sbjct: 114 SRTMV--------ISCFSFTEIAK---RAAKLMPDGGSML----TLTYGGSTRVMPNYNV 158
Query: 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAG 208
+ AKAA+++ R LA ++G IRVN I+ GP++ AG
Sbjct: 159 -MGVAKAALEASVRYLAADYGPQ-GIRVNAISAGPVRTLAG 197
|
Length = 271 |
| >gnl|CDD|236229 PRK08303, PRK08303, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 41.1 bits (97), Expect = 2e-04
Identities = 58/197 (29%), Positives = 87/197 (44%), Gaps = 30/197 (15%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGR----------RKTVLRSAVAALHSL 59
L+GKVAL+ G G G I+++LG GA + + GR R + + +
Sbjct: 6 LRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAA 65
Query: 60 GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAG-----NFLVPAEDLS-PNGF 113
G I ++ D E +VE G+LDILVN G + P + S G
Sbjct: 66 GGRGIAVQVDHLVPEQVRALVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGL 125
Query: 114 RTV-IEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINIS-ATLHYTATWYQIHV-- 169
R + + ID+ I H AL L + GG+++ I+ T Y AT Y++ V
Sbjct: 126 RMLRLAIDT--HLITSHFALPLLIR--------RPGGLVVEITDGTAEYNATHYRLSVFY 175
Query: 170 SAAKAAVDSITRSLALE 186
AK +V+ + SLA E
Sbjct: 176 DLAKTSVNRLAFSLAHE 192
|
Length = 305 |
| >gnl|CDD|187619 cd05361, haloalcohol_DH_SDR_c-like, haloalcohol dehalogenase, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 40.3 bits (94), Expect = 4e-04
Identities = 32/128 (25%), Positives = 51/128 (39%), Gaps = 10/128 (7%)
Query: 74 EDAVRVVESTINHFGKLDILV-NAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEAL 132
+ +V++ + G +D+LV N + P + S R E S+ F + A+
Sbjct: 57 QKPEELVDAVLQAGGAIDVLVSNDYIPRPMNPIDGTSEADIRQAFEALSIFPFALLQAAI 116
Query: 133 KYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYA 192
+KK G G II SA + ++ A+AA ++ SLA E
Sbjct: 117 AQMKKAG-------GGSIIFITSAVPKKPLAYNSLY-GPARAAAVALAESLAKELS-RDN 167
Query: 193 IRVNGIAP 200
I V I P
Sbjct: 168 ILVYAIGP 175
|
Dehalogenases cleave carbon-halogen bonds. Haloalcohol dehalogenase show low sequence similarity to short-chain dehydrogenases/reductases (SDRs). Like the SDRs, haloalcohol dehalogenases have a conserved catalytic triad (Ser-Tyr-Lys/Arg), and form a Rossmann fold. However, the normal classical SDR NAD(P)-binding motif (TGXXGXG) and NAD-binding function is replaced with a halide binding site, allowing the enzyme to catalyze a dehalogenation reaction. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 242 |
| >gnl|CDD|187589 cd05328, 3alpha_HSD_SDR_c, alpha hydroxysteroid dehydrogenase (3alpha_HSD), classical (c) SDRs | Back alignment and domain information |
|---|
Score = 39.4 bits (92), Expect = 7e-04
Identities = 24/84 (28%), Positives = 36/84 (42%), Gaps = 7/84 (8%)
Query: 170 SAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKD---TAGVS-KLAPEEIRSKATDYM 225
+ +K A+ TR A W +RVN +APGP++ A + E + + T
Sbjct: 152 AGSKEALTVWTRRRAATWLYGAGVRVNTVAPGPVETPILQAFLQDPRGGESVDAFVTPMG 211
Query: 226 AAYKFGEKWDIAMAALYLASDAGQ 249
E +IA +LASDA
Sbjct: 212 RR---AEPDEIAPVIAFLASDAAS 232
|
Bacterial 3-alpha_HSD, which catalyzes the NAD-dependent oxidoreduction of hydroxysteroids, is a dimeric member of the classical SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250 |
| >gnl|CDD|187665 cd09805, type2_17beta_HSD-like_SDR_c, human 17beta-hydroxysteroid dehydrogenase type 2 (type 2 17beta-HSD)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 39.6 bits (93), Expect = 7e-04
Identities = 54/225 (24%), Positives = 87/225 (38%), Gaps = 44/225 (19%)
Query: 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEG---- 68
K L+TG SG G ++ +L G TVL + + G A L
Sbjct: 1 KAVLITGCDSGFGNLLAKKLDSLGF---------TVL-AGCLTKNGPG--AKELRRVCSD 48
Query: 69 -------DVRKREDAVRVVESTINHFGKLDI--LVN-AAAGNFLVPAEDLSPNGFRTVIE 118
DV K E R + H G+ + LVN A F E L + +R +E
Sbjct: 49 RLRTLQLDVTKPEQIKRAAQWVKEHVGEKGLWGLVNNAGILGFGGDEELLPMDDYRKCME 108
Query: 119 IDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDS 178
++ GT + L L++ + G ++N+S+ A+KAAV++
Sbjct: 109 VNLFGTVEVTKAFLPLLRR---------AKGRVVNVSSMGGRVPFPAGGAYCASKAAVEA 159
Query: 179 ITRSLALE---WGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSK 220
+ SL E WG ++V+ I PG K G++ + +
Sbjct: 160 FSDSLRRELQPWG----VKVSIIEPGNFK--TGITGNSELWEKQA 198
|
17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical-SDR subgroup includes the human proteins: type 2 17beta-HSD, type 6 17beta-HSD, type 2 11beta-HSD, dehydrogenase/reductase SDR family member 9, short-chain dehydrogenase/reductase family 9C member 7, 3-hydroxybutyrate dehydrogenase type 1, and retinol dehydrogenase 5. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 281 |
| >gnl|CDD|236308 PRK08594, PRK08594, enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 39.3 bits (92), Expect = 8e-04
Identities = 44/192 (22%), Positives = 77/192 (40%), Gaps = 28/192 (14%)
Query: 24 IGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIP-AIGLEGDVRKREDAVRVVES 82
I + I+ L GA + + + + +L ++ L DV E+ E+
Sbjct: 21 IAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFET 80
Query: 83 TINHFGKLDILVNAAA--------GNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKY 134
G + + + A G FL + S +GF I + + EA K
Sbjct: 81 IKEEVGVIHGVAHCIAFANKEDLRGEFL----ETSRDGFLLAQNISAYSLTAVAREAKKL 136
Query: 135 LKKGGRGQASSSSGG--IIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYA 192
+ +GG + GG ++ N Y + + AKA++++ + LA + G D
Sbjct: 137 MTEGGSIVTLTYLGGERVVQN-----------YNV-MGVAKASLEASVKYLANDLGKD-G 183
Query: 193 IRVNGIAPGPIK 204
IRVN I+ GPI+
Sbjct: 184 IRVNAISAGPIR 195
|
Length = 257 |
| >gnl|CDD|181260 PRK08159, PRK08159, enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 39.0 bits (91), Expect = 0.001
Identities = 54/212 (25%), Positives = 88/212 (41%), Gaps = 32/212 (15%)
Query: 9 ILKGKVALLTG--GGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGL 66
++ GK L+ G I + I+ GA +A + + + LG G
Sbjct: 7 LMAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAELGAFVAG- 65
Query: 67 EGDVRKREDAVRVVESTINHFGKLDILVNAAA--------GNFLVPAEDLSPNGFRTVIE 118
DV V E+ +GKLD +V+A G ++ D S + F ++
Sbjct: 66 HCDVTDEASIDAVFETLEKKWGKLDFVVHAIGFSDKDELTGRYV----DTSRDNFTMTMD 121
Query: 119 IDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH---VSAAKAA 175
I SV +F + R + + GG I+ ++ +Y A H + AKAA
Sbjct: 122 I-SVYSFTAVAQ---------RAEKLMTDGGSILTLT---YYGAEKVMPHYNVMGVAKAA 168
Query: 176 VDSITRSLALEWGTDYAIRVNGIAPGPIKDTA 207
+++ + LA++ G IRVN I+ GPIK A
Sbjct: 169 LEASVKYLAVDLGPK-NIRVNAISAGPIKTLA 199
|
Length = 272 |
| >gnl|CDD|180586 PRK06483, PRK06483, dihydromonapterin reductase; Provisional | Back alignment and domain information |
|---|
Score = 38.4 bits (90), Expect = 0.002
Identities = 43/191 (22%), Positives = 76/191 (39%), Gaps = 19/191 (9%)
Query: 16 LLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKRED 75
L+TG G IG ++ L G + + R A+ L G A ++ D
Sbjct: 6 LITGAGQRIGLALAWHLLAQGQPVIVSYRTH---YPAIDGLRQAG--AQCIQADFSTNAG 60
Query: 76 AVRVVESTINHFGKLD-ILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKY 134
+ ++ H L I+ NA+ P L+ +++I +++
Sbjct: 61 IMAFIDELKQHTDGLRAIIHNASDWLAEKPGAPLADV-LARMMQIHVNAPYLLNLALEDL 119
Query: 135 LKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYA-- 192
L+ G + II+I+ + + I +A+KAA+D++T S A A
Sbjct: 120 LRGHGHAASD------IIHITDYVVEKGSDKHIAYAASKAALDNMTLSFA----AKLAPE 169
Query: 193 IRVNGIAPGPI 203
++VN IAP I
Sbjct: 170 VKVNSIAPALI 180
|
Length = 236 |
| >gnl|CDD|181762 PRK09291, PRK09291, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 37.3 bits (87), Expect = 0.004
Identities = 52/202 (25%), Positives = 90/202 (44%), Gaps = 37/202 (18%)
Query: 12 GKVALLTGGGSGIGFEISLQLGKHG----AAIAIMGRRKTVLRSAVAALHSLGIPAIGLE 67
K L+TG GSG G E++L+L + G A + I + T LR+ A L + L
Sbjct: 2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAP-QVTALRAEAARR-GLALRVEKL- 58
Query: 68 GDVRKREDAVRVVESTINHFGKLDILVNAA----AGNFL-VPAEDLSPNGFRTVIEIDSV 122
D+ D + E + D+L+N A AG + +P E + R + E +
Sbjct: 59 -DLTDAIDRAQAAEWDV------DVLLNNAGIGEAGAVVDIPVELV-----RELFETNVF 106
Query: 123 GTFIMCHEALKYLKKGGRGQA--SSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSIT 180
G + ++ + G+G+ +SS G+I T +T + A+K A+++I
Sbjct: 107 GPLELTQGFVRKMVARGKGKVVFTSSMAGLI-----TGPFTGAY-----CASKHALEAIA 156
Query: 181 RSLALEWGTDYAIRVNGIAPGP 202
++ E + I+V + PGP
Sbjct: 157 EAMHAEL-KPFGIQVATVNPGP 177
|
Length = 257 |
| >gnl|CDD|235694 PRK06079, PRK06079, enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 37.0 bits (86), Expect = 0.004
Identities = 41/152 (26%), Positives = 60/152 (39%), Gaps = 27/152 (17%)
Query: 66 LEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAE------DLSPNGFRTVIEI 119
+E DV E R + GK+D +V+A A + E D S +G+ +I
Sbjct: 60 VECDVASDESIERAFATIKERVGKIDGIVHAIA--YAKKEELGGNVTDTSRDGYALAQDI 117
Query: 120 DSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH----VSAAKAA 175
+ + A L G I+ TL Y + I + AKAA
Sbjct: 118 SAYSLIAVAKYARPLLNPGA---------SIV-----TLTYFGSERAIPNYNVMGIAKAA 163
Query: 176 VDSITRSLALEWGTDYAIRVNGIAPGPIKDTA 207
++S R LA + G IRVN I+ G +K A
Sbjct: 164 LESSVRYLARDLG-KKGIRVNAISAGAVKTLA 194
|
Length = 252 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 249 | |||
| COG4221 | 246 | Short-chain alcohol dehydrogenase of unknown speci | 100.0 | |
| PRK08339 | 263 | short chain dehydrogenase; Provisional | 100.0 | |
| KOG1200 | 256 | consensus Mitochondrial/plastidial beta-ketoacyl-A | 100.0 | |
| PRK12481 | 251 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 100.0 | |
| PRK06079 | 252 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK06505 | 271 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK08415 | 274 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK06603 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK07370 | 258 | enoyl-(acyl carrier protein) reductase; Validated | 100.0 | |
| COG0300 | 265 | DltE Short-chain dehydrogenases of various substra | 100.0 | |
| PRK08690 | 261 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK07533 | 258 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK07063 | 260 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK05867 | 253 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07984 | 262 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK08594 | 257 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK08993 | 253 | 2-deoxy-D-gluconate 3-dehydrogenase; Validated | 100.0 | |
| PRK07478 | 254 | short chain dehydrogenase; Provisional | 100.0 | |
| PLN02730 | 303 | enoyl-[acyl-carrier-protein] reductase | 100.0 | |
| PRK06114 | 254 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK08159 | 272 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK08085 | 254 | gluconate 5-dehydrogenase; Provisional | 100.0 | |
| KOG0725 | 270 | consensus Reductases with broad range of substrate | 100.0 | |
| PRK06997 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK07062 | 265 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK08589 | 272 | short chain dehydrogenase; Validated | 100.0 | |
| PRK06935 | 258 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 100.0 | |
| PRK07523 | 255 | gluconate 5-dehydrogenase; Provisional | 100.0 | |
| PRK08416 | 260 | 7-alpha-hydroxysteroid dehydrogenase; Provisional | 100.0 | |
| PRK07889 | 256 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK07985 | 294 | oxidoreductase; Provisional | 100.0 | |
| PRK08303 | 305 | short chain dehydrogenase; Provisional | 100.0 | |
| KOG1205 | 282 | consensus Predicted dehydrogenase [Secondary metab | 100.0 | |
| PRK08340 | 259 | glucose-1-dehydrogenase; Provisional | 100.0 | |
| PRK07035 | 252 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK12747 | 252 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK08277 | 278 | D-mannonate oxidoreductase; Provisional | 100.0 | |
| PRK07791 | 286 | short chain dehydrogenase; Provisional | 100.0 | |
| PF13561 | 241 | adh_short_C2: Enoyl-(Acyl carrier protein) reducta | 100.0 | |
| PRK09242 | 257 | tropinone reductase; Provisional | 100.0 | |
| TIGR01832 | 248 | kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod | 100.0 | |
| PRK07677 | 252 | short chain dehydrogenase; Provisional | 100.0 | |
| KOG1201 | 300 | consensus Hydroxysteroid 17-beta dehydrogenase 11 | 100.0 | |
| PRK06172 | 253 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07831 | 262 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06128 | 300 | oxidoreductase; Provisional | 100.0 | |
| PRK08265 | 261 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07097 | 265 | gluconate 5-dehydrogenase; Provisional | 100.0 | |
| PRK06113 | 255 | 7-alpha-hydroxysteroid dehydrogenase; Validated | 100.0 | |
| PRK06398 | 258 | aldose dehydrogenase; Validated | 100.0 | |
| PRK08936 | 261 | glucose-1-dehydrogenase; Provisional | 100.0 | |
| PRK08643 | 256 | acetoin reductase; Validated | 100.0 | |
| PRK05872 | 296 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06124 | 256 | gluconate 5-dehydrogenase; Provisional | 100.0 | |
| PRK12859 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 100.0 | |
| PRK06200 | 263 | 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog | 100.0 | |
| PRK06125 | 259 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK12823 | 260 | benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat | 100.0 | |
| PRK07856 | 252 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06463 | 255 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 100.0 | |
| PRK07067 | 257 | sorbitol dehydrogenase; Provisional | 100.0 | |
| PRK06300 | 299 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| KOG1207 | 245 | consensus Diacetyl reductase/L-xylulose reductase | 100.0 | |
| TIGR03325 | 262 | BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro | 100.0 | |
| PRK06940 | 275 | short chain dehydrogenase; Provisional | 100.0 | |
| PLN02253 | 280 | xanthoxin dehydrogenase | 100.0 | |
| PRK12743 | 256 | oxidoreductase; Provisional | 100.0 | |
| PRK06139 | 330 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07576 | 264 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06949 | 258 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK08226 | 263 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07814 | 263 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 100.0 | |
| PRK07890 | 258 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06171 | 266 | sorbitol-6-phosphate 2-dehydrogenase; Provisional | 100.0 | |
| PRK08642 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 100.0 | |
| PRK08862 | 227 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06841 | 255 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK05717 | 255 | oxidoreductase; Validated | 100.0 | |
| PRK08063 | 250 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK12384 | 259 | sorbitol-6-phosphate dehydrogenase; Provisional | 100.0 | |
| PRK12938 | 246 | acetyacetyl-CoA reductase; Provisional | 100.0 | |
| PRK06701 | 290 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK08278 | 273 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK05876 | 275 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06523 | 260 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK12937 | 245 | short chain dehydrogenase; Provisional | 100.0 | |
| TIGR02415 | 254 | 23BDH acetoin reductases. One member of this famil | 100.0 | |
| PRK07109 | 334 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06483 | 236 | dihydromonapterin reductase; Provisional | 100.0 | |
| TIGR01500 | 256 | sepiapter_red sepiapterin reductase. This model de | 100.0 | |
| PRK12748 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 100.0 | |
| PRK06500 | 249 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK08628 | 258 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK05599 | 246 | hypothetical protein; Provisional | 100.0 | |
| PRK08213 | 259 | gluconate 5-dehydrogenase; Provisional | 100.0 | |
| PRK08220 | 252 | 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | 100.0 | |
| TIGR03206 | 250 | benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr | 100.0 | |
| TIGR01831 | 239 | fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas | 100.0 | |
| PRK07231 | 251 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 100.0 | |
| PRK07792 | 306 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 100.0 | |
| PRK12939 | 250 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK12744 | 257 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06138 | 252 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 100.0 | |
| PRK06182 | 273 | short chain dehydrogenase; Validated | 100.0 | |
| PRK12935 | 247 | acetoacetyl-CoA reductase; Provisional | 100.0 | |
| PRK12936 | 245 | 3-ketoacyl-(acyl-carrier-protein) reductase NodG; | 100.0 | |
| PRK06123 | 248 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06550 | 235 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 100.0 | |
| PRK07825 | 273 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK05875 | 276 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06198 | 260 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK09186 | 256 | flagellin modification protein A; Provisional | 100.0 | |
| PRK12742 | 237 | oxidoreductase; Provisional | 100.0 | |
| PRK08263 | 275 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK05855 | 582 | short chain dehydrogenase; Validated | 100.0 | |
| TIGR02685 | 267 | pter_reduc_Leis pteridine reductase. Pteridine red | 100.0 | |
| PRK07069 | 251 | short chain dehydrogenase; Validated | 100.0 | |
| PRK06947 | 248 | glucose-1-dehydrogenase; Provisional | 100.0 | |
| PRK13394 | 262 | 3-hydroxybutyrate dehydrogenase; Provisional | 100.0 | |
| PRK06057 | 255 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK12429 | 258 | 3-hydroxybutyrate dehydrogenase; Provisional | 100.0 | |
| PRK08703 | 239 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK05866 | 293 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK12746 | 254 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07454 | 241 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07774 | 250 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK12824 | 245 | acetoacetyl-CoA reductase; Provisional | 100.0 | |
| PLN00015 | 308 | protochlorophyllide reductase | 100.0 | |
| PRK05650 | 270 | short chain dehydrogenase; Provisional | 100.0 | |
| KOG4169 | 261 | consensus 15-hydroxyprostaglandin dehydrogenase an | 100.0 | |
| PRK08217 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 100.0 | |
| PRK09134 | 258 | short chain dehydrogenase; Provisional | 100.0 | |
| TIGR01829 | 242 | AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy | 100.0 | |
| PRK06180 | 277 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07832 | 272 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK05854 | 313 | short chain dehydrogenase; Provisional | 100.0 | |
| TIGR02632 | 676 | RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc | 100.0 | |
| PRK06196 | 315 | oxidoreductase; Provisional | 100.0 | |
| PRK09072 | 263 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07024 | 257 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06194 | 287 | hypothetical protein; Provisional | 100.0 | |
| PRK07775 | 274 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK05884 | 223 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK05993 | 277 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK12745 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 100.0 | |
| PRK06914 | 280 | short chain dehydrogenase; Provisional | 100.0 | |
| TIGR01289 | 314 | LPOR light-dependent protochlorophyllide reductase | 100.0 | |
| PLN02780 | 320 | ketoreductase/ oxidoreductase | 100.0 | |
| PRK07060 | 245 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK05565 | 247 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 100.0 | |
| PRK10538 | 248 | malonic semialdehyde reductase; Provisional | 100.0 | |
| PRK12827 | 249 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06179 | 270 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07074 | 257 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07666 | 239 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 100.0 | |
| PRK12826 | 251 | 3-ketoacyl-(acyl-carrier-protein) reductase; Revie | 100.0 | |
| PRK07904 | 253 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK08267 | 260 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06077 | 252 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 100.0 | |
| PRK05557 | 248 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 100.0 | |
| PRK09730 | 247 | putative NAD(P)-binding oxidoreductase; Provisiona | 100.0 | |
| PRK08945 | 247 | putative oxoacyl-(acyl carrier protein) reductase; | 100.0 | |
| PRK05653 | 246 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 100.0 | |
| PRK06181 | 263 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK08261 | 450 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 100.0 | |
| COG3967 | 245 | DltE Short-chain dehydrogenase involved in D-alani | 100.0 | |
| PRK07577 | 234 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06924 | 251 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK08251 | 248 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK08324 | 681 | short chain dehydrogenase; Validated | 100.0 | |
| PRK09135 | 249 | pteridine reductase; Provisional | 100.0 | |
| PRK06197 | 306 | short chain dehydrogenase; Provisional | 100.0 | |
| KOG1208 | 314 | consensus Dehydrogenases with different specificit | 100.0 | |
| PRK07041 | 230 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK12825 | 249 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 100.0 | |
| PRK07453 | 322 | protochlorophyllide oxidoreductase; Validated | 100.0 | |
| PRK12829 | 264 | short chain dehydrogenase; Provisional | 100.0 | |
| TIGR01963 | 255 | PHB_DH 3-hydroxybutyrate dehydrogenase. This model | 100.0 | |
| PRK07806 | 248 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK05693 | 274 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK12828 | 239 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07023 | 243 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 100.0 | |
| COG1028 | 251 | FabG Dehydrogenases with different specificities ( | 100.0 | |
| PRK06482 | 276 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07326 | 237 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07102 | 243 | short chain dehydrogenase; Provisional | 100.0 | |
| KOG1610 | 322 | consensus Corticosteroid 11-beta-dehydrogenase and | 100.0 | |
| PRK07578 | 199 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK09009 | 235 | C factor cell-cell signaling protein; Provisional | 100.0 | |
| TIGR01830 | 239 | 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re | 100.0 | |
| KOG1209 | 289 | consensus 1-Acyl dihydroxyacetone phosphate reduct | 100.0 | |
| KOG1199 | 260 | consensus Short-chain alcohol dehydrogenase/3-hydr | 100.0 | |
| COG0623 | 259 | FabI Enoyl-[acyl-carrier-protein] | 100.0 | |
| PRK06101 | 240 | short chain dehydrogenase; Provisional | 100.0 | |
| KOG1611 | 249 | consensus Predicted short chain-type dehydrogenase | 100.0 | |
| PF00106 | 167 | adh_short: short chain dehydrogenase alcohol dehyd | 100.0 | |
| PRK05786 | 238 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 100.0 | |
| PRK09291 | 257 | short chain dehydrogenase; Provisional | 100.0 | |
| KOG1014 | 312 | consensus 17 beta-hydroxysteroid dehydrogenase typ | 100.0 | |
| PRK08017 | 256 | oxidoreductase; Provisional | 100.0 | |
| PRK08264 | 238 | short chain dehydrogenase; Validated | 100.0 | |
| PRK12367 | 245 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK08177 | 225 | short chain dehydrogenase; Provisional | 99.98 | |
| KOG1210 | 331 | consensus Predicted 3-ketosphinganine reductase [S | 99.97 | |
| PRK12428 | 241 | 3-alpha-hydroxysteroid dehydrogenase; Provisional | 99.97 | |
| PRK08219 | 227 | short chain dehydrogenase; Provisional | 99.97 | |
| PRK06953 | 222 | short chain dehydrogenase; Provisional | 99.97 | |
| KOG1204 | 253 | consensus Predicted dehydrogenase [Secondary metab | 99.96 | |
| PRK07424 | 406 | bifunctional sterol desaturase/short chain dehydro | 99.96 | |
| TIGR02813 | 2582 | omega_3_PfaA polyketide-type polyunsaturated fatty | 99.95 | |
| smart00822 | 180 | PKS_KR This enzymatic domain is part of bacterial | 99.94 | |
| PLN03209 | 576 | translocon at the inner envelope of chloroplast su | 99.94 | |
| PF08659 | 181 | KR: KR domain; InterPro: IPR013968 This domain is | 99.93 | |
| TIGR03589 | 324 | PseB UDP-N-acetylglucosamine 4,6-dehydratase. This | 99.93 | |
| KOG1478 | 341 | consensus 3-keto sterol reductase [Lipid transport | 99.92 | |
| PLN02989 | 325 | cinnamyl-alcohol dehydrogenase family protein | 99.91 | |
| TIGR02622 | 349 | CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member | 99.91 | |
| PRK13656 | 398 | trans-2-enoyl-CoA reductase; Provisional | 99.89 | |
| PRK06720 | 169 | hypothetical protein; Provisional | 99.89 | |
| PLN02572 | 442 | UDP-sulfoquinovose synthase | 99.88 | |
| PLN02986 | 322 | cinnamyl-alcohol dehydrogenase family protein | 99.87 | |
| PLN02653 | 340 | GDP-mannose 4,6-dehydratase | 99.87 | |
| PLN02650 | 351 | dihydroflavonol-4-reductase | 99.87 | |
| PLN02896 | 353 | cinnamyl-alcohol dehydrogenase | 99.87 | |
| PLN02583 | 297 | cinnamoyl-CoA reductase | 99.87 | |
| PLN00198 | 338 | anthocyanidin reductase; Provisional | 99.86 | |
| PLN02214 | 342 | cinnamoyl-CoA reductase | 99.86 | |
| PRK10217 | 355 | dTDP-glucose 4,6-dehydratase; Provisional | 99.85 | |
| KOG1502 | 327 | consensus Flavonol reductase/cinnamoyl-CoA reducta | 99.85 | |
| PLN02662 | 322 | cinnamyl-alcohol dehydrogenase family protein | 99.84 | |
| TIGR01181 | 317 | dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This | 99.84 | |
| TIGR01472 | 343 | gmd GDP-mannose 4,6-dehydratase. Excluded from thi | 99.83 | |
| PLN02240 | 352 | UDP-glucose 4-epimerase | 99.82 | |
| PRK10084 | 352 | dTDP-glucose 4,6 dehydratase; Provisional | 99.81 | |
| PLN02686 | 367 | cinnamoyl-CoA reductase | 99.81 | |
| PLN00141 | 251 | Tic62-NAD(P)-related group II protein; Provisional | 99.8 | |
| PRK15181 | 348 | Vi polysaccharide biosynthesis protein TviC; Provi | 99.79 | |
| COG1086 | 588 | Predicted nucleoside-diphosphate sugar epimerases | 99.78 | |
| TIGR03466 | 328 | HpnA hopanoid-associated sugar epimerase. The sequ | 99.78 | |
| PRK10675 | 338 | UDP-galactose-4-epimerase; Provisional | 99.77 | |
| COG1088 | 340 | RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope | 99.76 | |
| PF02719 | 293 | Polysacc_synt_2: Polysaccharide biosynthesis prote | 99.76 | |
| PLN02427 | 386 | UDP-apiose/xylose synthase | 99.75 | |
| TIGR01179 | 328 | galE UDP-glucose-4-epimerase. This enzyme intercon | 99.75 | |
| PF01370 | 236 | Epimerase: NAD dependent epimerase/dehydratase fam | 99.75 | |
| TIGR01746 | 367 | Thioester-redct thioester reductase domain. It has | 99.74 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 99.71 | |
| PF01073 | 280 | 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso | 99.71 | |
| PLN02695 | 370 | GDP-D-mannose-3',5'-epimerase | 99.7 | |
| PRK11150 | 308 | rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro | 99.69 | |
| COG0451 | 314 | WcaG Nucleoside-diphosphate-sugar epimerases [Cell | 99.68 | |
| PRK11908 | 347 | NAD-dependent epimerase/dehydratase family protein | 99.67 | |
| PRK08125 | 660 | bifunctional UDP-glucuronic acid decarboxylase/UDP | 99.67 | |
| COG1087 | 329 | GalE UDP-glucose 4-epimerase [Cell envelope biogen | 99.67 | |
| TIGR02197 | 314 | heptose_epim ADP-L-glycero-D-manno-heptose-6-epime | 99.65 | |
| PLN02206 | 442 | UDP-glucuronate decarboxylase | 99.65 | |
| TIGR01214 | 287 | rmlD dTDP-4-dehydrorhamnose reductase. This enzyme | 99.65 | |
| PLN02657 | 390 | 3,8-divinyl protochlorophyllide a 8-vinyl reductas | 99.65 | |
| PLN02725 | 306 | GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas | 99.62 | |
| PLN02166 | 436 | dTDP-glucose 4,6-dehydratase | 99.62 | |
| PF13460 | 183 | NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X | 99.59 | |
| CHL00194 | 317 | ycf39 Ycf39; Provisional | 99.56 | |
| KOG1371 | 343 | consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo | 99.55 | |
| PRK09987 | 299 | dTDP-4-dehydrorhamnose reductase; Provisional | 99.55 | |
| PF08643 | 299 | DUF1776: Fungal family of unknown function (DUF177 | 99.51 | |
| PLN02996 | 491 | fatty acyl-CoA reductase | 99.5 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 99.49 | |
| KOG4022 | 236 | consensus Dihydropteridine reductase DHPR/QDPR [Am | 99.48 | |
| PLN02778 | 298 | 3,5-epimerase/4-reductase | 99.47 | |
| PF04321 | 286 | RmlD_sub_bind: RmlD substrate binding domain; Inte | 99.47 | |
| PRK05865 | 854 | hypothetical protein; Provisional | 99.47 | |
| COG1091 | 281 | RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo | 99.45 | |
| PF07993 | 249 | NAD_binding_4: Male sterility protein; InterPro: I | 99.45 | |
| COG1089 | 345 | Gmd GDP-D-mannose dehydratase [Cell envelope bioge | 99.42 | |
| KOG1430 | 361 | consensus C-3 sterol dehydrogenase/3-beta-hydroxys | 99.37 | |
| PRK08309 | 177 | short chain dehydrogenase; Provisional | 99.36 | |
| TIGR03443 | 1389 | alpha_am_amid L-aminoadipate-semialdehyde dehydrog | 99.34 | |
| COG3320 | 382 | Putative dehydrogenase domain of multifunctional n | 99.33 | |
| TIGR01777 | 292 | yfcH conserved hypothetical protein TIGR01777. Thi | 99.32 | |
| KOG0747 | 331 | consensus Putative NAD+-dependent epimerases [Carb | 99.28 | |
| COG1090 | 297 | Predicted nucleoside-diphosphate sugar epimerase [ | 99.26 | |
| TIGR03649 | 285 | ergot_EASG ergot alkaloid biosynthesis protein, AF | 99.24 | |
| PLN02503 | 605 | fatty acyl-CoA reductase 2 | 99.23 | |
| TIGR02114 | 227 | coaB_strep phosphopantothenate--cysteine ligase, s | 99.21 | |
| PRK12320 | 699 | hypothetical protein; Provisional | 99.21 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 99.2 | |
| PLN00016 | 378 | RNA-binding protein; Provisional | 99.19 | |
| COG4982 | 866 | 3-oxoacyl-[acyl-carrier protein] | 99.19 | |
| KOG1429 | 350 | consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro | 99.11 | |
| PRK08261 | 450 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.09 | |
| KOG1202 | 2376 | consensus Animal-type fatty acid synthase and rela | 99.02 | |
| PRK05579 | 399 | bifunctional phosphopantothenoylcysteine decarboxy | 98.95 | |
| PRK12548 | 289 | shikimate 5-dehydrogenase; Provisional | 98.92 | |
| cd01078 | 194 | NAD_bind_H4MPT_DH NADP binding domain of methylene | 98.82 | |
| PRK06732 | 229 | phosphopantothenate--cysteine ligase; Validated | 98.76 | |
| PF05368 | 233 | NmrA: NmrA-like family; InterPro: IPR008030 NmrA i | 98.73 | |
| TIGR00521 | 390 | coaBC_dfp phosphopantothenoylcysteine decarboxylas | 98.72 | |
| KOG1431 | 315 | consensus GDP-L-fucose synthetase [Carbohydrate tr | 98.7 | |
| KOG2865 | 391 | consensus NADH:ubiquinone oxidoreductase, NDUFA9/3 | 98.65 | |
| KOG1203 | 411 | consensus Predicted dehydrogenase [Carbohydrate tr | 98.65 | |
| KOG1221 | 467 | consensus Acyl-CoA reductase [Lipid transport and | 98.59 | |
| KOG1372 | 376 | consensus GDP-mannose 4,6 dehydratase [Carbohydrat | 98.54 | |
| COG0702 | 275 | Predicted nucleoside-diphosphate-sugar epimerases | 98.53 | |
| COG1748 | 389 | LYS9 Saccharopine dehydrogenase and related protei | 98.45 | |
| PF03435 | 386 | Saccharop_dh: Saccharopine dehydrogenase ; InterPr | 98.42 | |
| PF01488 | 135 | Shikimate_DH: Shikimate / quinate 5-dehydrogenase; | 98.4 | |
| PRK14106 | 450 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 98.39 | |
| PRK09620 | 229 | hypothetical protein; Provisional | 98.38 | |
| PLN00106 | 323 | malate dehydrogenase | 98.37 | |
| PTZ00325 | 321 | malate dehydrogenase; Provisional | 98.31 | |
| PRK14982 | 340 | acyl-ACP reductase; Provisional | 98.29 | |
| COG2910 | 211 | Putative NADH-flavin reductase [General function p | 98.26 | |
| KOG2733 | 423 | consensus Uncharacterized membrane protein [Functi | 98.15 | |
| PRK02472 | 447 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 98.0 | |
| cd01065 | 155 | NAD_bind_Shikimate_DH NAD(P) binding domain of Shi | 97.99 | |
| TIGR00507 | 270 | aroE shikimate 5-dehydrogenase. This model finds p | 97.91 | |
| PRK00258 | 278 | aroE shikimate 5-dehydrogenase; Reviewed | 97.91 | |
| cd01336 | 325 | MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli | 97.88 | |
| TIGR02813 | 2582 | omega_3_PfaA polyketide-type polyunsaturated fatty | 97.82 | |
| PF04127 | 185 | DFP: DNA / pantothenate metabolism flavoprotein; I | 97.82 | |
| cd08253 | 325 | zeta_crystallin Zeta-crystallin with NADP-dependen | 97.78 | |
| PRK15116 | 268 | sulfur acceptor protein CsdL; Provisional | 97.75 | |
| cd05291 | 306 | HicDH_like L-2-hydroxyisocapronate dehydrogenases | 97.71 | |
| KOG4039 | 238 | consensus Serine/threonine kinase TIP30/CC3 [Signa | 97.7 | |
| PRK05086 | 312 | malate dehydrogenase; Provisional | 97.69 | |
| cd01338 | 322 | MDH_choloroplast_like Chloroplast-like malate dehy | 97.69 | |
| cd01075 | 200 | NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l | 97.68 | |
| PRK12549 | 284 | shikimate 5-dehydrogenase; Reviewed | 97.68 | |
| cd00704 | 323 | MDH Malate dehydrogenase. Malate dehydrogenase (MD | 97.66 | |
| PF00056 | 141 | Ldh_1_N: lactate/malate dehydrogenase, NAD binding | 97.64 | |
| cd00755 | 231 | YgdL_like Family of activating enzymes (E1) of ubi | 97.63 | |
| PRK00066 | 315 | ldh L-lactate dehydrogenase; Reviewed | 97.57 | |
| TIGR01809 | 282 | Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO | 97.56 | |
| cd08266 | 342 | Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam | 97.55 | |
| TIGR00518 | 370 | alaDH alanine dehydrogenase. The family of known L | 97.54 | |
| PRK13940 | 414 | glutamyl-tRNA reductase; Provisional | 97.53 | |
| PRK14027 | 283 | quinate/shikimate dehydrogenase; Provisional | 97.53 | |
| PRK06849 | 389 | hypothetical protein; Provisional | 97.49 | |
| PLN02520 | 529 | bifunctional 3-dehydroquinate dehydratase/shikimat | 97.46 | |
| PRK12475 | 338 | thiamine/molybdopterin biosynthesis MoeB-like prot | 97.44 | |
| KOG2774 | 366 | consensus NAD dependent epimerase [General functio | 97.41 | |
| TIGR01758 | 324 | MDH_euk_cyt malate dehydrogenase, NAD-dependent. T | 97.41 | |
| TIGR02356 | 202 | adenyl_thiF thiazole biosynthesis adenylyltransfer | 97.37 | |
| PRK09310 | 477 | aroDE bifunctional 3-dehydroquinate dehydratase/sh | 97.34 | |
| COG0169 | 283 | AroE Shikimate 5-dehydrogenase [Amino acid transpo | 97.34 | |
| cd08295 | 338 | double_bond_reductase_like Arabidopsis alkenal dou | 97.31 | |
| PRK12749 | 288 | quinate/shikimate dehydrogenase; Reviewed | 97.31 | |
| COG3268 | 382 | Uncharacterized conserved protein [Function unknow | 97.31 | |
| PRK13982 | 475 | bifunctional SbtC-like/phosphopantothenoylcysteine | 97.27 | |
| PRK14968 | 188 | putative methyltransferase; Provisional | 97.26 | |
| PLN03154 | 348 | putative allyl alcohol dehydrogenase; Provisional | 97.25 | |
| COG0604 | 326 | Qor NADPH:quinone reductase and related Zn-depende | 97.23 | |
| PLN02602 | 350 | lactate dehydrogenase | 97.22 | |
| TIGR00715 | 256 | precor6x_red precorrin-6x reductase. This enzyme w | 97.22 | |
| PRK08762 | 376 | molybdopterin biosynthesis protein MoeB; Validated | 97.2 | |
| TIGR00561 | 511 | pntA NAD(P) transhydrogenase, alpha subunit. In so | 97.17 | |
| cd08259 | 332 | Zn_ADH5 Alcohol dehydrogenases of the MDR family. | 97.16 | |
| PRK05690 | 245 | molybdopterin biosynthesis protein MoeB; Provision | 97.15 | |
| cd00650 | 263 | LDH_MDH_like NAD-dependent, lactate dehydrogenase- | 97.15 | |
| PRK09424 | 509 | pntA NAD(P) transhydrogenase subunit alpha; Provis | 97.14 | |
| TIGR02825 | 325 | B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15 | 97.14 | |
| TIGR02853 | 287 | spore_dpaA dipicolinic acid synthetase, A subunit. | 97.14 | |
| PRK00045 | 423 | hemA glutamyl-tRNA reductase; Reviewed | 97.13 | |
| PF10727 | 127 | Rossmann-like: Rossmann-like domain; InterPro: IPR | 97.12 | |
| cd05188 | 271 | MDR Medium chain reductase/dehydrogenase (MDR)/zin | 97.11 | |
| COG0373 | 414 | HemA Glutamyl-tRNA reductase [Coenzyme metabolism] | 97.1 | |
| COG2130 | 340 | Putative NADP-dependent oxidoreductases [General f | 97.08 | |
| PTZ00117 | 319 | malate dehydrogenase; Provisional | 97.07 | |
| cd05213 | 311 | NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain | 97.07 | |
| cd05293 | 312 | LDH_1 A subgroup of L-lactate dehydrogenases. L-la | 97.07 | |
| TIGR01035 | 417 | hemA glutamyl-tRNA reductase. This enzyme, togethe | 97.06 | |
| PRK07688 | 339 | thiamine/molybdopterin biosynthesis ThiF/MoeB-like | 97.06 | |
| PLN00203 | 519 | glutamyl-tRNA reductase | 97.02 | |
| COG0569 | 225 | TrkA K+ transport systems, NAD-binding component [ | 97.01 | |
| cd08293 | 345 | PTGR2 Prostaglandin reductase. Prostaglandins and | 97.0 | |
| cd05276 | 323 | p53_inducible_oxidoreductase PIG3 p53-inducible qu | 96.99 | |
| PRK08644 | 212 | thiamine biosynthesis protein ThiF; Provisional | 96.95 | |
| KOG1198 | 347 | consensus Zinc-binding oxidoreductase [Energy prod | 96.92 | |
| cd01080 | 168 | NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of | 96.9 | |
| PF02254 | 116 | TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg | 96.9 | |
| PRK14192 | 283 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 96.89 | |
| PF01113 | 124 | DapB_N: Dihydrodipicolinate reductase, N-terminus; | 96.88 | |
| PRK09496 | 453 | trkA potassium transporter peripheral membrane com | 96.88 | |
| PF00899 | 135 | ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a | 96.87 | |
| PRK05597 | 355 | molybdopterin biosynthesis protein MoeB; Validated | 96.85 | |
| cd00300 | 300 | LDH_like L-lactate dehydrogenase-like enzymes. Mem | 96.83 | |
| PRK04308 | 445 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 96.82 | |
| TIGR01772 | 312 | MDH_euk_gproteo malate dehydrogenase, NAD-dependen | 96.81 | |
| cd00757 | 228 | ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1 | 96.81 | |
| PRK04148 | 134 | hypothetical protein; Provisional | 96.8 | |
| cd01483 | 143 | E1_enzyme_family Superfamily of activating enzymes | 96.79 | |
| PRK06718 | 202 | precorrin-2 dehydrogenase; Reviewed | 96.76 | |
| PLN02819 | 1042 | lysine-ketoglutarate reductase/saccharopine dehydr | 96.75 | |
| cd05290 | 307 | LDH_3 A subgroup of L-lactate dehydrogenases. L-la | 96.75 | |
| KOG0023 | 360 | consensus Alcohol dehydrogenase, class V [Secondar | 96.74 | |
| PTZ00082 | 321 | L-lactate dehydrogenase; Provisional | 96.71 | |
| TIGR02355 | 240 | moeB molybdopterin synthase sulfurylase MoeB. This | 96.68 | |
| PF03446 | 163 | NAD_binding_2: NAD binding domain of 6-phosphogluc | 96.67 | |
| PLN00112 | 444 | malate dehydrogenase (NADP); Provisional | 96.66 | |
| PRK09880 | 343 | L-idonate 5-dehydrogenase; Provisional | 96.66 | |
| PF12242 | 78 | Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2 | 96.64 | |
| cd05294 | 309 | LDH-like_MDH_nadp A lactate dehydrogenases-like st | 96.64 | |
| TIGR02354 | 200 | thiF_fam2 thiamine biosynthesis protein ThiF, fami | 96.63 | |
| PRK01438 | 480 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 96.63 | |
| PRK08306 | 296 | dipicolinate synthase subunit A; Reviewed | 96.63 | |
| TIGR01759 | 323 | MalateDH-SF1 malate dehydrogenase. This model repr | 96.59 | |
| cd08294 | 329 | leukotriene_B4_DH_like 13-PGR is a bifunctional en | 96.58 | |
| cd01492 | 197 | Aos1_SUMO Ubiquitin activating enzyme (E1) subunit | 96.58 | |
| COG1064 | 339 | AdhP Zn-dependent alcohol dehydrogenases [General | 96.52 | |
| PF12076 | 164 | Wax2_C: WAX2 C-terminal domain; InterPro: IPR02194 | 96.51 | |
| cd05288 | 329 | PGDH Prostaglandin dehydrogenases. Prostaglandins | 96.5 | |
| TIGR01724 | 341 | hmd_rel H2-forming N(5),N(10)-methenyltetrahydrome | 96.47 | |
| PRK08223 | 287 | hypothetical protein; Validated | 96.47 | |
| cd01337 | 310 | MDH_glyoxysomal_mitochondrial Glyoxysomal and mito | 96.44 | |
| cd01487 | 174 | E1_ThiF_like E1_ThiF_like. Member of superfamily o | 96.44 | |
| PRK12480 | 330 | D-lactate dehydrogenase; Provisional | 96.44 | |
| cd05212 | 140 | NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom | 96.42 | |
| PLN03139 | 386 | formate dehydrogenase; Provisional | 96.42 | |
| cd01485 | 198 | E1-1_like Ubiquitin activating enzyme (E1), repeat | 96.42 | |
| PF13241 | 103 | NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_ | 96.39 | |
| PRK09496 | 453 | trkA potassium transporter peripheral membrane com | 96.38 | |
| PRK06719 | 157 | precorrin-2 dehydrogenase; Validated | 96.37 | |
| TIGR01915 | 219 | npdG NADPH-dependent F420 reductase. This model re | 96.37 | |
| PRK05442 | 326 | malate dehydrogenase; Provisional | 96.36 | |
| TIGR02824 | 325 | quinone_pig3 putative NAD(P)H quinone oxidoreducta | 96.34 | |
| cd05292 | 308 | LDH_2 A subgroup of L-lactate dehydrogenases. L-la | 96.31 | |
| KOG1196 | 343 | consensus Predicted NAD-dependent oxidoreductase [ | 96.31 | |
| cd05191 | 86 | NAD_bind_amino_acid_DH NAD(P) binding domain of am | 96.29 | |
| PRK13243 | 333 | glyoxylate reductase; Reviewed | 96.29 | |
| PRK05600 | 370 | thiamine biosynthesis protein ThiF; Validated | 96.28 | |
| PF02737 | 180 | 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind | 96.27 | |
| PF02882 | 160 | THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl | 96.25 | |
| cd05311 | 226 | NAD_bind_2_malic_enz NAD(P) binding domain of mali | 96.25 | |
| cd08268 | 328 | MDR2 Medium chain dehydrogenases/reductase (MDR)/z | 96.24 | |
| PRK14175 | 286 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 96.24 | |
| PLN02740 | 381 | Alcohol dehydrogenase-like | 96.22 | |
| cd01489 | 312 | Uba2_SUMO Ubiquitin activating enzyme (E1) subunit | 96.22 | |
| KOG0025 | 354 | consensus Zn2+-binding dehydrogenase (nuclear rece | 96.21 | |
| cd08300 | 368 | alcohol_DH_class_III class III alcohol dehydrogena | 96.19 | |
| TIGR01470 | 205 | cysG_Nterm siroheme synthase, N-terminal domain. T | 96.17 | |
| TIGR02818 | 368 | adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr | 96.17 | |
| PRK14194 | 301 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 96.12 | |
| COG3007 | 398 | Uncharacterized paraquat-inducible protein B [Func | 96.11 | |
| cd08239 | 339 | THR_DH_like L-threonine dehydrogenase (TDH)-like. | 96.09 | |
| TIGR01757 | 387 | Malate-DH_plant malate dehydrogenase, NADP-depende | 96.05 | |
| COG0039 | 313 | Mdh Malate/lactate dehydrogenases [Energy producti | 96.04 | |
| TIGR01771 | 299 | L-LDH-NAD L-lactate dehydrogenase. This model repr | 96.03 | |
| PRK05476 | 425 | S-adenosyl-L-homocysteine hydrolase; Provisional | 96.02 | |
| PRK14851 | 679 | hypothetical protein; Provisional | 96.02 | |
| COG2085 | 211 | Predicted dinucleotide-binding enzymes [General fu | 96.0 | |
| PRK07411 | 390 | hypothetical protein; Validated | 95.98 | |
| PRK12550 | 272 | shikimate 5-dehydrogenase; Reviewed | 95.98 | |
| cd08238 | 410 | sorbose_phosphate_red L-sorbose-1-phosphate reduct | 95.96 | |
| cd08244 | 324 | MDR_enoyl_red Possible enoyl reductase. Member ide | 95.96 | |
| TIGR03201 | 349 | dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co | 95.91 | |
| PTZ00075 | 476 | Adenosylhomocysteinase; Provisional | 95.91 | |
| cd08290 | 341 | ETR 2-enoyl thioester reductase (ETR). 2-enoyl thi | 95.91 | |
| PRK08328 | 231 | hypothetical protein; Provisional | 95.88 | |
| PRK07877 | 722 | hypothetical protein; Provisional | 95.88 | |
| PRK07574 | 385 | formate dehydrogenase; Provisional | 95.86 | |
| PLN02586 | 360 | probable cinnamyl alcohol dehydrogenase | 95.86 | |
| PRK08655 | 437 | prephenate dehydrogenase; Provisional | 95.84 | |
| PF02826 | 178 | 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy | 95.84 | |
| PF01262 | 168 | AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal | 95.78 | |
| PRK15469 | 312 | ghrA bifunctional glyoxylate/hydroxypyruvate reduc | 95.77 | |
| cd08289 | 326 | MDR_yhfp_like Yhfp putative quinone oxidoreductase | 95.77 | |
| PRK13403 | 335 | ketol-acid reductoisomerase; Provisional | 95.75 | |
| PRK14967 | 223 | putative methyltransferase; Provisional | 95.74 | |
| cd08301 | 369 | alcohol_DH_plants Plant alcohol dehydrogenase. NAD | 95.73 | |
| PRK14191 | 285 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 95.72 | |
| PLN02928 | 347 | oxidoreductase family protein | 95.71 | |
| PLN02968 | 381 | Probable N-acetyl-gamma-glutamyl-phosphate reducta | 95.68 | |
| cd08281 | 371 | liver_ADH_like1 Zinc-dependent alcohol dehydrogena | 95.68 | |
| cd01484 | 234 | E1-2_like Ubiquitin activating enzyme (E1), repeat | 95.67 | |
| PRK07878 | 392 | molybdopterin biosynthesis-like protein MoeZ; Vali | 95.63 | |
| cd08243 | 320 | quinone_oxidoreductase_like_1 Quinone oxidoreducta | 95.62 | |
| cd01076 | 227 | NAD_bind_1_Glu_DH NAD(P) binding domain of glutama | 95.62 | |
| cd08241 | 323 | QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t | 95.6 | |
| PRK14188 | 296 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 95.58 | |
| cd08250 | 329 | Mgc45594_like Mgc45594 gene product and other MDR | 95.58 | |
| cd08292 | 324 | ETR_like_2 2-enoyl thioester reductase (ETR) like | 95.56 | |
| COG2263 | 198 | Predicted RNA methylase [Translation, ribosomal st | 95.55 | |
| PRK07066 | 321 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 95.54 | |
| TIGR00537 | 179 | hemK_rel_arch HemK-related putative methylase. The | 95.53 | |
| PRK14189 | 285 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 95.53 | |
| TIGR00872 | 298 | gnd_rel 6-phosphogluconate dehydrogenase (decarbox | 95.51 | |
| cd05282 | 323 | ETR_like 2-enoyl thioester reductase-like. 2-enoyl | 95.51 | |
| cd08230 | 355 | glucose_DH Glucose dehydrogenase. Glucose dehydrog | 95.5 | |
| cd08291 | 324 | ETR_like_1 2-enoyl thioester reductase (ETR) like | 95.5 | |
| PRK14852 | 989 | hypothetical protein; Provisional | 95.5 | |
| PRK03369 | 488 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 95.49 | |
| PRK13771 | 334 | putative alcohol dehydrogenase; Provisional | 95.47 | |
| PLN02178 | 375 | cinnamyl-alcohol dehydrogenase | 95.46 | |
| COG1179 | 263 | Dinucleotide-utilizing enzymes involved in molybdo | 95.44 | |
| cd08248 | 350 | RTN4I1 Human Reticulon 4 Interacting Protein 1. Hu | 95.44 | |
| PRK09288 | 395 | purT phosphoribosylglycinamide formyltransferase 2 | 95.43 | |
| PTZ00354 | 334 | alcohol dehydrogenase; Provisional | 95.43 |
| >COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-48 Score=301.50 Aligned_cols=227 Identities=27% Similarity=0.304 Sum_probs=202.6
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhC
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 88 (249)
.+++|+++|||||+|||.++|++|++.|++|++++|+.++++++++++.+ ..+..+..|++|+++++++++.+.+.|+
T Consensus 3 ~~~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~--~~~~~~~~DVtD~~~~~~~i~~~~~~~g 80 (246)
T COG4221 3 TLKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGA--GAALALALDVTDRAAVEAAIEALPEEFG 80 (246)
T ss_pred CCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhcc--CceEEEeeccCCHHHHHHHHHHHHHhhC
Confidence 45679999999999999999999999999999999999999999999975 5789999999999999999999999999
Q ss_pred CccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchh
Q 025672 89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH 168 (249)
Q Consensus 89 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~ 168 (249)
++|++|||||.....++.+.+.++|+.++++|+.|.++.+++++|.|.+++. |+||++||..+..++++...
T Consensus 81 ~iDiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~--------G~IiN~~SiAG~~~y~~~~v 152 (246)
T COG4221 81 RIDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKS--------GHIINLGSIAGRYPYPGGAV 152 (246)
T ss_pred cccEEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCC--------ceEEEeccccccccCCCCcc
Confidence 9999999999988899999999999999999999999999999999999875 89999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhccCC
Q 025672 169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247 (249)
Q Consensus 169 y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~ 247 (249)
|+++|+++.+|++.|++|+. .++|||..|.||.+.|+.+...... .-.+...+...-....+|+|||+++.|.++..
T Consensus 153 Y~ATK~aV~~fs~~LR~e~~-g~~IRVt~I~PG~v~~~~~s~v~~~-g~~~~~~~~y~~~~~l~p~dIA~~V~~~~~~P 229 (246)
T COG4221 153 YGATKAAVRAFSLGLRQELA-GTGIRVTVISPGLVETTEFSTVRFE-GDDERADKVYKGGTALTPEDIAEAVLFAATQP 229 (246)
T ss_pred chhhHHHHHHHHHHHHHHhc-CCCeeEEEecCceecceecccccCC-chhhhHHHHhccCCCCCHHHHHHHHHHHHhCC
Confidence 99999999999999999998 8899999999999986644333322 22222223223345789999999999998754
|
|
| >PRK08339 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-47 Score=313.13 Aligned_cols=233 Identities=24% Similarity=0.305 Sum_probs=206.2
Q ss_pred CCCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhc-CCCeeEEEccCCCHHHHHHHHHHHH
Q 025672 6 KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL-GIPAIGLEGDVRKREDAVRVVESTI 84 (249)
Q Consensus 6 ~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~ 84 (249)
.++++++|++|||||++|||++++++|+++|++|++++|+.++++++.+++... +.++.++++|++|+++++++++++.
T Consensus 2 ~~~~l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~ 81 (263)
T PRK08339 2 LKIDLSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELK 81 (263)
T ss_pred CccCCCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHH
Confidence 456789999999999999999999999999999999999998888888877543 5678999999999999999999985
Q ss_pred HHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCc
Q 025672 85 NHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW 164 (249)
Q Consensus 85 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~ 164 (249)
.++++|++|||+|.....++.+.+.++|++.+++|+.+++.++++++|.|.+++. |+||++||..+..+.+
T Consensus 82 -~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~--------g~Ii~isS~~~~~~~~ 152 (263)
T PRK08339 82 -NIGEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGF--------GRIIYSTSVAIKEPIP 152 (263)
T ss_pred -hhCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCC--------CEEEEEcCccccCCCC
Confidence 5899999999999877677888999999999999999999999999999987653 8999999999988888
Q ss_pred cchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCC---------CChHHHHHhhhhhhcccCCCCHHH
Q 025672 165 YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK---------LAPEEIRSKATDYMAAYKFGEKWD 235 (249)
Q Consensus 165 ~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~d 235 (249)
+...|+++|+|+.+|+++++.|++ ++|||||+|+||+++|++.... ...++..+.+....|++|+++|+|
T Consensus 153 ~~~~y~asKaal~~l~~~la~el~-~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~d 231 (263)
T PRK08339 153 NIALSNVVRISMAGLVRTLAKELG-PKGITVNGIMPGIIRTDRVIQLAQDRAKREGKSVEEALQEYAKPIPLGRLGEPEE 231 (263)
T ss_pred cchhhHHHHHHHHHHHHHHHHHhc-ccCeEEEEEEeCcCccHHHHHHHHhhhhccCCCHHHHHHHHhccCCcccCcCHHH
Confidence 899999999999999999999998 8999999999999998754221 112344445566789999999999
Q ss_pred HHHHHHHhccCCC
Q 025672 236 IAMAALYLASDAG 248 (249)
Q Consensus 236 va~~v~~l~s~~a 248 (249)
+++++.||+|+++
T Consensus 232 va~~v~fL~s~~~ 244 (263)
T PRK08339 232 IGYLVAFLASDLG 244 (263)
T ss_pred HHHHHHHHhcchh
Confidence 9999999999865
|
|
| >KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-48 Score=288.75 Aligned_cols=231 Identities=28% Similarity=0.361 Sum_probs=209.8
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhC
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 88 (249)
.++.|.++||||++|||++++..|+++|++|++.+++....++....+..+++ -..+.||+++..+++..+++..+.+|
T Consensus 11 r~~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~~-h~aF~~DVS~a~~v~~~l~e~~k~~g 89 (256)
T KOG1200|consen 11 RLMSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYGD-HSAFSCDVSKAHDVQNTLEEMEKSLG 89 (256)
T ss_pred HHhcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCCc-cceeeeccCcHHHHHHHHHHHHHhcC
Confidence 35689999999999999999999999999999999999988888888876544 45678999999999999999999999
Q ss_pred CccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchh
Q 025672 89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH 168 (249)
Q Consensus 89 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~ 168 (249)
+|+++|||||+..+..+..++.++|++.+.+|+.|.|+.+|++.+.|...+. .+++||++||+.+..+..++..
T Consensus 90 ~psvlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~------~~~sIiNvsSIVGkiGN~GQtn 163 (256)
T KOG1200|consen 90 TPSVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQ------QGLSIINVSSIVGKIGNFGQTN 163 (256)
T ss_pred CCcEEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcC------CCceEEeehhhhcccccccchh
Confidence 9999999999999888889999999999999999999999999998654432 1369999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhccCCC
Q 025672 169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAG 248 (249)
Q Consensus 169 y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~a 248 (249)
|+++|+++.+|+|+.|+|++ ++|||||.|+||++.|||. ..+ ++...+++...+|++|++.+||||..+.||+||.+
T Consensus 164 YAAsK~GvIgftktaArEla-~knIrvN~VlPGFI~tpMT-~~m-p~~v~~ki~~~iPmgr~G~~EevA~~V~fLAS~~s 240 (256)
T KOG1200|consen 164 YAASKGGVIGFTKTAARELA-RKNIRVNVVLPGFIATPMT-EAM-PPKVLDKILGMIPMGRLGEAEEVANLVLFLASDAS 240 (256)
T ss_pred hhhhcCceeeeeHHHHHHHh-hcCceEeEeccccccChhh-hhc-CHHHHHHHHccCCccccCCHHHHHHHHHHHhcccc
Confidence 99999999999999999999 9999999999999997754 333 56788889999999999999999999999999987
Q ss_pred C
Q 025672 249 Q 249 (249)
Q Consensus 249 ~ 249 (249)
+
T Consensus 241 s 241 (256)
T KOG1200|consen 241 S 241 (256)
T ss_pred c
Confidence 5
|
|
| >PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-46 Score=307.04 Aligned_cols=232 Identities=29% Similarity=0.404 Sum_probs=202.8
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
+++++|+++||||++|||++++++|+++|++|++++|+.. ++..+++...+.++.++++|++|+++++++++++.+.+
T Consensus 4 ~~l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~--~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 81 (251)
T PRK12481 4 FDLNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEA--PETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVM 81 (251)
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchH--HHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHc
Confidence 5688999999999999999999999999999999988642 44555565556788999999999999999999999999
Q ss_pred CCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch
Q 025672 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 167 (249)
Q Consensus 88 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~ 167 (249)
+++|++|||||.....++.+.++++|++.+++|+.+++.++++++|.|.+++. +|+||++||..+..+.+...
T Consensus 82 g~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~-------~g~ii~isS~~~~~~~~~~~ 154 (251)
T PRK12481 82 GHIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGN-------GGKIINIASMLSFQGGIRVP 154 (251)
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCC-------CCEEEEeCChhhcCCCCCCc
Confidence 99999999999877778888999999999999999999999999999976532 38999999999998888889
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhccCC
Q 025672 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247 (249)
Q Consensus 168 ~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~ 247 (249)
.|++||+|+.+|+++++.|++ ++||+||+|+||+++|++.......+...+......|.+|+++|||+++++.||+|+.
T Consensus 155 ~Y~asK~a~~~l~~~la~e~~-~~girvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~peeva~~~~~L~s~~ 233 (251)
T PRK12481 155 SYTASKSAVMGLTRALATELS-QYNINVNAIAPGYMATDNTAALRADTARNEAILERIPASRWGTPDDLAGPAIFLSSSA 233 (251)
T ss_pred chHHHHHHHHHHHHHHHHHHh-hcCeEEEEEecCCCccCchhhcccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcc
Confidence 999999999999999999998 8999999999999998764432222333344566788999999999999999999987
Q ss_pred CC
Q 025672 248 GQ 249 (249)
Q Consensus 248 a~ 249 (249)
++
T Consensus 234 ~~ 235 (251)
T PRK12481 234 SD 235 (251)
T ss_pred cc
Confidence 53
|
|
| >PRK06079 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-46 Score=306.32 Aligned_cols=226 Identities=22% Similarity=0.228 Sum_probs=196.1
Q ss_pred CCCCcEEEEecCC--CchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHH
Q 025672 9 ILKGKVALLTGGG--SGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (249)
Q Consensus 9 ~l~~k~~lItGa~--~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 86 (249)
.+++|+++||||+ +|||+++|++|+++|++|++++|+. +.++..+++. +.++.+++||++|+++++++++++.+.
T Consensus 4 ~l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~-~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 80 (252)
T PRK06079 4 ILSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQND-RMKKSLQKLV--DEEDLLVECDVASDESIERAFATIKER 80 (252)
T ss_pred ccCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCch-HHHHHHHhhc--cCceeEEeCCCCCHHHHHHHHHHHHHH
Confidence 4789999999999 8999999999999999999999983 4444444443 246789999999999999999999999
Q ss_pred hCCccEEEEcCCCCCC----CCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc
Q 025672 87 FGKLDILVNAAAGNFL----VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 162 (249)
Q Consensus 87 ~~~id~vi~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~ 162 (249)
++++|++|||||.... .++.+.+.++|+..+++|+.+++.++++++|.|.+ +|+||++||..+..+
T Consensus 81 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~----------~g~Iv~iss~~~~~~ 150 (252)
T PRK06079 81 VGKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNP----------GASIVTLTYFGSERA 150 (252)
T ss_pred hCCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhccc----------CceEEEEeccCcccc
Confidence 9999999999997643 57788899999999999999999999999999853 278999999998888
Q ss_pred CccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHH
Q 025672 163 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALY 242 (249)
Q Consensus 163 ~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~ 242 (249)
.+++..|+++|+|+.+|+++++.|++ ++||+||+|+||+|+|++.......++..+.+....|.+|+++||||++++.|
T Consensus 151 ~~~~~~Y~asKaal~~l~~~la~el~-~~gI~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~~~~ 229 (252)
T PRK06079 151 IPNYNVMGIAKAALESSVRYLARDLG-KKGIRVNAISAGAVKTLAVTGIKGHKDLLKESDSRTVDGVGVTIEEVGNTAAF 229 (252)
T ss_pred CCcchhhHHHHHHHHHHHHHHHHHhh-hcCcEEEEEecCcccccccccCCChHHHHHHHHhcCcccCCCCHHHHHHHHHH
Confidence 88899999999999999999999998 89999999999999987543322334445556667889999999999999999
Q ss_pred hccCCC
Q 025672 243 LASDAG 248 (249)
Q Consensus 243 l~s~~a 248 (249)
|+|+++
T Consensus 230 l~s~~~ 235 (252)
T PRK06079 230 LLSDLS 235 (252)
T ss_pred HhCccc
Confidence 999875
|
|
| >PRK06505 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-46 Score=308.59 Aligned_cols=229 Identities=25% Similarity=0.292 Sum_probs=192.5
Q ss_pred CCCCCcEEEEecCCC--chhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHH
Q 025672 8 DILKGKVALLTGGGS--GIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN 85 (249)
Q Consensus 8 ~~l~~k~~lItGa~~--giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 85 (249)
..+++|++|||||++ |||+++|++|+++|++|++++|+....+.+.+.....+. ..++++|++|+++++++++++.+
T Consensus 3 ~~l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~g~-~~~~~~Dv~d~~~v~~~~~~~~~ 81 (271)
T PRK06505 3 GLMQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESLGS-DFVLPCDVEDIASVDAVFEALEK 81 (271)
T ss_pred cccCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHHHhcCC-ceEEeCCCCCHHHHHHHHHHHHH
Confidence 347899999999997 999999999999999999999886443333332223233 35789999999999999999999
Q ss_pred HhCCccEEEEcCCCCCC----CCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc
Q 025672 86 HFGKLDILVNAAAGNFL----VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT 161 (249)
Q Consensus 86 ~~~~id~vi~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~ 161 (249)
.+|++|++|||||+... .++.+.+.++|++.+++|+.++++++++++|.|.+ +|+||++||..+..
T Consensus 82 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~----------~G~Iv~isS~~~~~ 151 (271)
T PRK06505 82 KWGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPD----------GGSMLTLTYGGSTR 151 (271)
T ss_pred HhCCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhcc----------CceEEEEcCCCccc
Confidence 99999999999997643 46778899999999999999999999999999963 27899999999888
Q ss_pred cCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHH
Q 025672 162 ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAAL 241 (249)
Q Consensus 162 ~~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~ 241 (249)
+.+.+..|+++|+|+.+|+|+|+.|++ ++|||||+|+||+++|++.......+...+......|++|+++|||++++++
T Consensus 152 ~~~~~~~Y~asKaAl~~l~r~la~el~-~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~~p~~r~~~peeva~~~~ 230 (271)
T PRK06505 152 VMPNYNVMGVAKAALEASVRYLAADYG-PQGIRVNAISAGPVRTLAGAGIGDARAIFSYQQRNSPLRRTVTIDEVGGSAL 230 (271)
T ss_pred cCCccchhhhhHHHHHHHHHHHHHHHh-hcCeEEEEEecCCccccccccCcchHHHHHHHhhcCCccccCCHHHHHHHHH
Confidence 888899999999999999999999998 8999999999999998754221122223334445678899999999999999
Q ss_pred HhccCCC
Q 025672 242 YLASDAG 248 (249)
Q Consensus 242 ~l~s~~a 248 (249)
||+|+++
T Consensus 231 fL~s~~~ 237 (271)
T PRK06505 231 YLLSDLS 237 (271)
T ss_pred HHhCccc
Confidence 9999865
|
|
| >PRK08415 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-46 Score=308.37 Aligned_cols=226 Identities=27% Similarity=0.289 Sum_probs=189.6
Q ss_pred CCCCcEEEEecCC--CchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHH-HhcCCCeeEEEccCCCHHHHHHHHHHHHH
Q 025672 9 ILKGKVALLTGGG--SGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAAL-HSLGIPAIGLEGDVRKREDAVRVVESTIN 85 (249)
Q Consensus 9 ~l~~k~~lItGa~--~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~-~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 85 (249)
.+++|++|||||+ +|||+++|++|+++|++|++++|+.+ .++..+++ ...+.. .++++|++|+++++++++++.+
T Consensus 2 ~l~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~-~~~~~~~~~~~~~~~-~~~~~Dv~d~~~v~~~~~~i~~ 79 (274)
T PRK08415 2 IMKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEA-LKKRVEPIAQELGSD-YVYELDVSKPEHFKSLAESLKK 79 (274)
T ss_pred ccCCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHH-HHHHHHHHHHhcCCc-eEEEecCCCHHHHHHHHHHHHH
Confidence 4679999999997 89999999999999999999999853 22222333 222334 6789999999999999999999
Q ss_pred HhCCccEEEEcCCCCCC----CCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc
Q 025672 86 HFGKLDILVNAAAGNFL----VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT 161 (249)
Q Consensus 86 ~~~~id~vi~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~ 161 (249)
.++++|++|||||+... .++.+.+.++|++.+++|+.++++++++++|.|.++ |+||++||..+..
T Consensus 80 ~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~----------g~Iv~isS~~~~~ 149 (274)
T PRK08415 80 DLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDG----------ASVLTLSYLGGVK 149 (274)
T ss_pred HcCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccC----------CcEEEEecCCCcc
Confidence 99999999999997642 567788999999999999999999999999999642 7899999999988
Q ss_pred cCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCCh-HHHHHhhhhhhcccCCCCHHHHHHHH
Q 025672 162 ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP-EEIRSKATDYMAAYKFGEKWDIAMAA 240 (249)
Q Consensus 162 ~~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~dva~~v 240 (249)
+.+.+..|++||+|+.+|+++++.|++ ++||+||+|+||+++|++.. ...+ +...+......|++|+++|+||++++
T Consensus 150 ~~~~~~~Y~asKaal~~l~~~la~el~-~~gIrVn~v~PG~v~T~~~~-~~~~~~~~~~~~~~~~pl~r~~~pedva~~v 227 (274)
T PRK08415 150 YVPHYNVMGVAKAALESSVRYLAVDLG-KKGIRVNAISAGPIKTLAAS-GIGDFRMILKWNEINAPLKKNVSIEEVGNSG 227 (274)
T ss_pred CCCcchhhhhHHHHHHHHHHHHHHHhh-hcCeEEEEEecCccccHHHh-ccchhhHHhhhhhhhCchhccCCHHHHHHHH
Confidence 888889999999999999999999998 89999999999999986432 2211 11222223457889999999999999
Q ss_pred HHhccCCC
Q 025672 241 LYLASDAG 248 (249)
Q Consensus 241 ~~l~s~~a 248 (249)
.||+|+++
T Consensus 228 ~fL~s~~~ 235 (274)
T PRK08415 228 MYLLSDLS 235 (274)
T ss_pred HHHhhhhh
Confidence 99999865
|
|
| >PRK06603 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-46 Score=303.76 Aligned_cols=230 Identities=24% Similarity=0.268 Sum_probs=193.9
Q ss_pred CCCCCCCcEEEEecCCC--chhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhc-CCCeeEEEccCCCHHHHHHHHHH
Q 025672 6 KGDILKGKVALLTGGGS--GIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL-GIPAIGLEGDVRKREDAVRVVES 82 (249)
Q Consensus 6 ~~~~l~~k~~lItGa~~--giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~ 82 (249)
.+..+++|+++||||++ |||+++|++|+++|++|++++|+. ..++..+++... +. ..++++|++|++++++++++
T Consensus 2 ~~~~~~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~-~~~~~~~~l~~~~g~-~~~~~~Dv~~~~~v~~~~~~ 79 (260)
T PRK06603 2 TTGLLQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSE-VLEKRVKPLAEEIGC-NFVSELDVTNPKSISNLFDD 79 (260)
T ss_pred CCcccCCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCch-HHHHHHHHHHHhcCC-ceEEEccCCCHHHHHHHHHH
Confidence 35567899999999997 999999999999999999999874 344444445332 33 34679999999999999999
Q ss_pred HHHHhCCccEEEEcCCCCCC----CCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccc
Q 025672 83 TINHFGKLDILVNAAAGNFL----VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL 158 (249)
Q Consensus 83 ~~~~~~~id~vi~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~ 158 (249)
+.++++++|++|||+|.... .++.+.+.++|++.+++|+.+++.++++++|.|.+ +|+||++||..
T Consensus 80 ~~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~----------~G~Iv~isS~~ 149 (260)
T PRK06603 80 IKEKWGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHD----------GGSIVTLTYYG 149 (260)
T ss_pred HHHHcCCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhcc----------CceEEEEecCc
Confidence 99999999999999997542 46778899999999999999999999999999953 28899999998
Q ss_pred ccccCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHH
Q 025672 159 HYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAM 238 (249)
Q Consensus 159 ~~~~~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~ 238 (249)
+..+.++...|++||+|+.+|+++++.|++ ++||+||+|+||+++|++.......++..+......|++|+++|+|+++
T Consensus 150 ~~~~~~~~~~Y~asKaal~~l~~~la~el~-~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~ 228 (260)
T PRK06603 150 AEKVIPNYNVMGVAKAALEASVKYLANDMG-ENNIRVNAISAGPIKTLASSAIGDFSTMLKSHAATAPLKRNTTQEDVGG 228 (260)
T ss_pred cccCCCcccchhhHHHHHHHHHHHHHHHhh-hcCeEEEEEecCcCcchhhhcCCCcHHHHHHHHhcCCcCCCCCHHHHHH
Confidence 888888889999999999999999999998 8999999999999998753221112233344556678999999999999
Q ss_pred HHHHhccCCC
Q 025672 239 AALYLASDAG 248 (249)
Q Consensus 239 ~v~~l~s~~a 248 (249)
++.||+|+++
T Consensus 229 ~~~~L~s~~~ 238 (260)
T PRK06603 229 AAVYLFSELS 238 (260)
T ss_pred HHHHHhCccc
Confidence 9999999875
|
|
| >PRK07370 enoyl-(acyl carrier protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-45 Score=301.69 Aligned_cols=230 Identities=27% Similarity=0.297 Sum_probs=196.3
Q ss_pred CCCCcEEEEecCC--CchhHHHHHHHHHcCCeEEEEeCCcc--hHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHH
Q 025672 9 ILKGKVALLTGGG--SGIGFEISLQLGKHGAAIAIMGRRKT--VLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTI 84 (249)
Q Consensus 9 ~l~~k~~lItGa~--~giG~~~a~~l~~~G~~v~l~~r~~~--~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 84 (249)
++++|+++||||+ +|||+++|++|+++|++|++++|+.+ +.++..+++...+.++.++++|++|+++++++++++.
T Consensus 3 ~l~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~ 82 (258)
T PRK07370 3 DLTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIK 82 (258)
T ss_pred ccCCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHH
Confidence 4789999999986 89999999999999999999876543 3455556665444567789999999999999999999
Q ss_pred HHhCCccEEEEcCCCCC----CCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccc
Q 025672 85 NHFGKLDILVNAAAGNF----LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY 160 (249)
Q Consensus 85 ~~~~~id~vi~~ag~~~----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~ 160 (249)
+.++++|++|||||+.. ..++.+.+.++|++.+++|+.+++.++++++|.|.+. |+||++||..+.
T Consensus 83 ~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~----------g~Iv~isS~~~~ 152 (258)
T PRK07370 83 QKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEG----------GSIVTLTYLGGV 152 (258)
T ss_pred HHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhC----------CeEEEEeccccc
Confidence 99999999999999764 2567788999999999999999999999999999642 789999999998
Q ss_pred ccCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHH
Q 025672 161 TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAA 240 (249)
Q Consensus 161 ~~~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v 240 (249)
.+.++...|++||+|+.+|+++|+.|++ ++||+||+|+||+++|++.......++..+......|++|+++|+|+++++
T Consensus 153 ~~~~~~~~Y~asKaal~~l~~~la~el~-~~gI~Vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~~ 231 (258)
T PRK07370 153 RAIPNYNVMGVAKAALEASVRYLAAELG-PKNIRVNAISAGPIRTLASSAVGGILDMIHHVEEKAPLRRTVTQTEVGNTA 231 (258)
T ss_pred cCCcccchhhHHHHHHHHHHHHHHHHhC-cCCeEEEEEecCcccCchhhccccchhhhhhhhhcCCcCcCCCHHHHHHHH
Confidence 8888999999999999999999999998 899999999999999875422211123334455567899999999999999
Q ss_pred HHhccCCCC
Q 025672 241 LYLASDAGQ 249 (249)
Q Consensus 241 ~~l~s~~a~ 249 (249)
.||+|++++
T Consensus 232 ~fl~s~~~~ 240 (258)
T PRK07370 232 AFLLSDLAS 240 (258)
T ss_pred HHHhChhhc
Confidence 999998753
|
|
| >COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-45 Score=294.46 Aligned_cols=222 Identities=27% Similarity=0.310 Sum_probs=199.5
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhc-CCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL-GIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
.+++++++|||||+|||+++|++|+++|++|++++|++++++++++++++. +..+.++.+|+++++++..+.+++.+.+
T Consensus 3 ~~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~ 82 (265)
T COG0300 3 PMKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERG 82 (265)
T ss_pred CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcC
Confidence 467899999999999999999999999999999999999999999999854 5789999999999999999999999998
Q ss_pred CCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch
Q 025672 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 167 (249)
Q Consensus 88 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~ 167 (249)
..||++|||||+...+++.+.++++.++++++|+.++..|+++++|.|.+++. |+||+|+|..++.+.|..+
T Consensus 83 ~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~--------G~IiNI~S~ag~~p~p~~a 154 (265)
T COG0300 83 GPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGA--------GHIINIGSAAGLIPTPYMA 154 (265)
T ss_pred CcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--------ceEEEEechhhcCCCcchH
Confidence 89999999999999999999999999999999999999999999999998875 9999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhcc
Q 025672 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245 (249)
Q Consensus 168 ~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s 245 (249)
.|++||+++.+|+++|+.|+. ++||+|.+|+||+|.|+........ .....+...+.+|+++|+..++.+.
T Consensus 155 vY~ATKa~v~~fSeaL~~EL~-~~gV~V~~v~PG~~~T~f~~~~~~~------~~~~~~~~~~~~~~~va~~~~~~l~ 225 (265)
T COG0300 155 VYSATKAFVLSFSEALREELK-GTGVKVTAVCPGPTRTEFFDAKGSD------VYLLSPGELVLSPEDVAEAALKALE 225 (265)
T ss_pred HHHHHHHHHHHHHHHHHHHhc-CCCeEEEEEecCccccccccccccc------cccccchhhccCHHHHHHHHHHHHh
Confidence 999999999999999999998 9999999999999997654311111 1111234457899999999888764
|
|
| >PRK08690 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-45 Score=300.31 Aligned_cols=228 Identities=22% Similarity=0.195 Sum_probs=191.5
Q ss_pred CCCcEEEEecC--CCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 10 LKGKVALLTGG--GSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 10 l~~k~~lItGa--~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
+++|+++|||| ++|||+++|++|+++|++|++++|+. +.++..+++.........++||++|+++++++++++.+++
T Consensus 4 ~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 82 (261)
T PRK08690 4 LQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVD-KLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHW 82 (261)
T ss_pred cCCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHh
Confidence 67999999997 67999999999999999999988764 3444444443332345679999999999999999999999
Q ss_pred CCccEEEEcCCCCCCC----C-CCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc
Q 025672 88 GKLDILVNAAAGNFLV----P-AEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 162 (249)
Q Consensus 88 ~~id~vi~~ag~~~~~----~-~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~ 162 (249)
+++|++|||||+.... + +.+.+.++|+..+++|+.+++.++++++|.|.++ +|+||++||..+..+
T Consensus 83 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~---------~g~Iv~iss~~~~~~ 153 (261)
T PRK08690 83 DGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGR---------NSAIVALSYLGAVRA 153 (261)
T ss_pred CCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhc---------CcEEEEEcccccccC
Confidence 9999999999986532 2 3467788999999999999999999999998653 278999999999888
Q ss_pred CccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHH
Q 025672 163 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALY 242 (249)
Q Consensus 163 ~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~ 242 (249)
.+++..|+++|+|+.+|+++++.|++ ++||+||+|+||+|+|++.......++..+.+.+..|++|+++|||||+++.|
T Consensus 154 ~~~~~~Y~asKaal~~l~~~la~e~~-~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~v~~ 232 (261)
T PRK08690 154 IPNYNVMGMAKASLEAGIRFTAACLG-KEGIRCNGISAGPIKTLAASGIADFGKLLGHVAAHNPLRRNVTIEEVGNTAAF 232 (261)
T ss_pred CCCcccchhHHHHHHHHHHHHHHHhh-hcCeEEEEEecCcccchhhhcCCchHHHHHHHhhcCCCCCCCCHHHHHHHHHH
Confidence 88899999999999999999999998 89999999999999987543222223344445566799999999999999999
Q ss_pred hccCCC
Q 025672 243 LASDAG 248 (249)
Q Consensus 243 l~s~~a 248 (249)
|+++++
T Consensus 233 l~s~~~ 238 (261)
T PRK08690 233 LLSDLS 238 (261)
T ss_pred HhCccc
Confidence 999865
|
|
| >PRK07533 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-45 Score=299.46 Aligned_cols=231 Identities=24% Similarity=0.238 Sum_probs=193.7
Q ss_pred CCCCCCCcEEEEecCC--CchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHH
Q 025672 6 KGDILKGKVALLTGGG--SGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVEST 83 (249)
Q Consensus 6 ~~~~l~~k~~lItGa~--~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 83 (249)
+.+++++|++|||||+ +|||+++|++|+++|++|++++|+.+..+.+ +++......+.+++||++|+++++++++++
T Consensus 4 ~~~~~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~-~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~ 82 (258)
T PRK07533 4 PLLPLAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYV-EPLAEELDAPIFLPLDVREPGQLEAVFARI 82 (258)
T ss_pred cccccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHH-HHHHHhhccceEEecCcCCHHHHHHHHHHH
Confidence 4456889999999999 5999999999999999999999986432222 222211123568999999999999999999
Q ss_pred HHHhCCccEEEEcCCCCCC----CCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccc
Q 025672 84 INHFGKLDILVNAAAGNFL----VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH 159 (249)
Q Consensus 84 ~~~~~~id~vi~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~ 159 (249)
.+.++++|++|||||.... .++.+.+.++|++.+++|+.+++++++.++|.|.+ +|+||++||..+
T Consensus 83 ~~~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~----------~g~Ii~iss~~~ 152 (258)
T PRK07533 83 AEEWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTN----------GGSLLTMSYYGA 152 (258)
T ss_pred HHHcCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhcc----------CCEEEEEecccc
Confidence 9999999999999997642 46778899999999999999999999999999953 278999999988
Q ss_pred cccCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHH
Q 025672 160 YTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMA 239 (249)
Q Consensus 160 ~~~~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~ 239 (249)
..+.+.+..|+++|+|+.+|+++|+.|++ ++||+||+|+||+++|++.......++..+......|++|+.+|+|++++
T Consensus 153 ~~~~~~~~~Y~asKaal~~l~~~la~el~-~~gI~Vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~ 231 (258)
T PRK07533 153 EKVVENYNLMGPVKAALESSVRYLAAELG-PKGIRVHAISPGPLKTRAASGIDDFDALLEDAAERAPLRRLVDIDDVGAV 231 (258)
T ss_pred ccCCccchhhHHHHHHHHHHHHHHHHHhh-hcCcEEEEEecCCcCChhhhccCCcHHHHHHHHhcCCcCCCCCHHHHHHH
Confidence 88888889999999999999999999998 89999999999999987643222223334445567789999999999999
Q ss_pred HHHhccCCC
Q 025672 240 ALYLASDAG 248 (249)
Q Consensus 240 v~~l~s~~a 248 (249)
++||+++++
T Consensus 232 ~~~L~s~~~ 240 (258)
T PRK07533 232 AAFLASDAA 240 (258)
T ss_pred HHHHhChhh
Confidence 999999865
|
|
| >PRK07063 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-44 Score=297.58 Aligned_cols=231 Identities=29% Similarity=0.441 Sum_probs=204.9
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHh--cCCCeeEEEccCCCHHHHHHHHHHHHHH
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHS--LGIPAIGLEGDVRKREDAVRVVESTINH 86 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 86 (249)
.+++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++.. .+.++.++++|++|+++++++++++.+.
T Consensus 4 ~l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 83 (260)
T PRK07063 4 RLAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEA 83 (260)
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHH
Confidence 36899999999999999999999999999999999999988888888865 4567889999999999999999999999
Q ss_pred hCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccc
Q 025672 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ 166 (249)
Q Consensus 87 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~ 166 (249)
++++|++|||||.....+..+.+.++|+.++++|+.+++.++++++|.|.++.. |+||++||..+..+.++.
T Consensus 84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~--------g~iv~isS~~~~~~~~~~ 155 (260)
T PRK07063 84 FGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGR--------GSIVNIASTHAFKIIPGC 155 (260)
T ss_pred hCCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCC--------eEEEEECChhhccCCCCc
Confidence 999999999999876666677889999999999999999999999999987543 889999999999888889
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCC----CChHHHHHhhhhhhcccCCCCHHHHHHHHHH
Q 025672 167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK----LAPEEIRSKATDYMAAYKFGEKWDIAMAALY 242 (249)
Q Consensus 167 ~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~ 242 (249)
..|+++|+|+.+|+++++.|++ ++||+||+|+||+++|++.... ..++...+......|++|+++|+|++++++|
T Consensus 156 ~~Y~~sKaa~~~~~~~la~el~-~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~va~~~~f 234 (260)
T PRK07063 156 FPYPVAKHGLLGLTRALGIEYA-ARNVRVNAIAPGYIETQLTEDWWNAQPDPAAARAETLALQPMKRIGRPEEVAMTAVF 234 (260)
T ss_pred hHHHHHHHHHHHHHHHHHHHhC-ccCeEEEEEeeCCccChhhhhhhhccCChHHHHHHHHhcCCCCCCCCHHHHHHHHHH
Confidence 9999999999999999999998 8899999999999998764321 1122233445566789999999999999999
Q ss_pred hccCCC
Q 025672 243 LASDAG 248 (249)
Q Consensus 243 l~s~~a 248 (249)
|+++++
T Consensus 235 l~s~~~ 240 (260)
T PRK07063 235 LASDEA 240 (260)
T ss_pred HcCccc
Confidence 999875
|
|
| >PRK05867 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-45 Score=296.98 Aligned_cols=231 Identities=28% Similarity=0.363 Sum_probs=202.7
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
+++++|++|||||++|||++++++|+++|++|++++|+.++++++.+++...+.++.++.+|++|+++++++++++.+.+
T Consensus 5 ~~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 84 (253)
T PRK05867 5 FDLHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAEL 84 (253)
T ss_pred ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 46789999999999999999999999999999999999998999888887777788899999999999999999999999
Q ss_pred CCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC-c-c
Q 025672 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT-W-Y 165 (249)
Q Consensus 88 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~-~-~ 165 (249)
+++|++|||+|.....++.+.+.++|++.+++|+.+++.++++++|.|.++.. +|+||++||..+.... + +
T Consensus 85 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~-------~g~iv~~sS~~~~~~~~~~~ 157 (253)
T PRK05867 85 GGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQ-------GGVIINTASMSGHIINVPQQ 157 (253)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCC-------CcEEEEECcHHhcCCCCCCC
Confidence 99999999999877777888899999999999999999999999999976532 3789999998776433 3 4
Q ss_pred chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhcc
Q 025672 166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245 (249)
Q Consensus 166 ~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s 245 (249)
...|+++|+|+.+|++++++|++ ++||+||+|+||+++|++.... + +..+.+....|.+|+.+|+|+|++++||++
T Consensus 158 ~~~Y~asKaal~~~~~~la~e~~-~~gI~vn~i~PG~v~t~~~~~~--~-~~~~~~~~~~~~~r~~~p~~va~~~~~L~s 233 (253)
T PRK05867 158 VSHYCASKAAVIHLTKAMAVELA-PHKIRVNSVSPGYILTELVEPY--T-EYQPLWEPKIPLGRLGRPEELAGLYLYLAS 233 (253)
T ss_pred ccchHHHHHHHHHHHHHHHHHHh-HhCeEEEEeecCCCCCcccccc--h-HHHHHHHhcCCCCCCcCHHHHHHHHHHHcC
Confidence 57899999999999999999998 8899999999999998764322 1 223344556788999999999999999999
Q ss_pred CCCC
Q 025672 246 DAGQ 249 (249)
Q Consensus 246 ~~a~ 249 (249)
++++
T Consensus 234 ~~~~ 237 (253)
T PRK05867 234 EASS 237 (253)
T ss_pred cccC
Confidence 8753
|
|
| >PRK07984 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-45 Score=298.28 Aligned_cols=227 Identities=22% Similarity=0.222 Sum_probs=191.7
Q ss_pred CCCcEEEEecCCC--chhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 10 LKGKVALLTGGGS--GIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 10 l~~k~~lItGa~~--giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
+++|+++||||++ |||+++|++|+++|++|++++|+ +++++..+++......+.++.||++|+++++++++++.+.+
T Consensus 4 l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 82 (262)
T PRK07984 4 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQN-DKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVW 82 (262)
T ss_pred cCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecc-hhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhc
Confidence 6799999999986 99999999999999999999987 44555566665444456789999999999999999999999
Q ss_pred CCccEEEEcCCCCCCCC-----CCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc
Q 025672 88 GKLDILVNAAAGNFLVP-----AEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 162 (249)
Q Consensus 88 ~~id~vi~~ag~~~~~~-----~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~ 162 (249)
+++|++|||||+....+ +.+.+.++|+..+++|+.+++.+++++.|.+.+ +|+||++||..+..+
T Consensus 83 g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~----------~g~Iv~iss~~~~~~ 152 (262)
T PRK07984 83 PKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP----------GSALLTLSYLGAERA 152 (262)
T ss_pred CCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcC----------CcEEEEEecCCCCCC
Confidence 99999999999764322 456788999999999999999999999986632 278999999988888
Q ss_pred CccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHH
Q 025672 163 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALY 242 (249)
Q Consensus 163 ~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~ 242 (249)
.+.+.+|++||+|+.+|+++++.|++ ++|||||+|+||+++|++.......++..+......|.+|+.+|+||++++.|
T Consensus 153 ~~~~~~Y~asKaal~~l~~~la~el~-~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~~~~ 231 (262)
T PRK07984 153 IPNYNVMGLAKASLEANVRYMANAMG-PEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAF 231 (262)
T ss_pred CCCcchhHHHHHHHHHHHHHHHHHhc-ccCcEEeeeecCcccchHHhcCCchHHHHHHHHHcCCCcCCCCHHHHHHHHHH
Confidence 88889999999999999999999998 88999999999999986432211122333444556788999999999999999
Q ss_pred hccCCC
Q 025672 243 LASDAG 248 (249)
Q Consensus 243 l~s~~a 248 (249)
|+++.+
T Consensus 232 L~s~~~ 237 (262)
T PRK07984 232 LCSDLS 237 (262)
T ss_pred HcCccc
Confidence 999865
|
|
| >PRK08594 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-44 Score=296.88 Aligned_cols=229 Identities=21% Similarity=0.232 Sum_probs=193.3
Q ss_pred CCCCCcEEEEecCC--CchhHHHHHHHHHcCCeEEEEeCCc---chHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHH
Q 025672 8 DILKGKVALLTGGG--SGIGFEISLQLGKHGAAIAIMGRRK---TVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVES 82 (249)
Q Consensus 8 ~~l~~k~~lItGa~--~giG~~~a~~l~~~G~~v~l~~r~~---~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~ 82 (249)
+++++|+++||||+ +|||+++|++|+++|++|++++|+. +.++++.+++. +.++.++++|++|++++++++++
T Consensus 3 ~~~~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~ 80 (257)
T PRK08594 3 LSLEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLE--GQESLLLPCDVTSDEEITACFET 80 (257)
T ss_pred cccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcC--CCceEEEecCCCCHHHHHHHHHH
Confidence 35789999999997 8999999999999999999998764 33444444442 45788999999999999999999
Q ss_pred HHHHhCCccEEEEcCCCCC----CCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccc
Q 025672 83 TINHFGKLDILVNAAAGNF----LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL 158 (249)
Q Consensus 83 ~~~~~~~id~vi~~ag~~~----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~ 158 (249)
+.+.+|++|++|||||+.. ..++.+.+.++|...+++|+.+++.++++++|.|.+ +|+||++||..
T Consensus 81 ~~~~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~----------~g~Iv~isS~~ 150 (257)
T PRK08594 81 IKEEVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTE----------GGSIVTLTYLG 150 (257)
T ss_pred HHHhCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhccc----------CceEEEEcccC
Confidence 9999999999999999754 256678899999999999999999999999999954 28899999999
Q ss_pred ccccCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHH
Q 025672 159 HYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAM 238 (249)
Q Consensus 159 ~~~~~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~ 238 (249)
+..+.+....|++||+|+.+|+++++.|++ ++||+||+|+||+++|++.......++..+......|++|+.+|+|+++
T Consensus 151 ~~~~~~~~~~Y~asKaal~~l~~~la~el~-~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~~va~ 229 (257)
T PRK08594 151 GERVVQNYNVMGVAKASLEASVKYLANDLG-KDGIRVNAISAGPIRTLSAKGVGGFNSILKEIEERAPLRRTTTQEEVGD 229 (257)
T ss_pred CccCCCCCchhHHHHHHHHHHHHHHHHHhh-hcCCEEeeeecCcccCHhHhhhccccHHHHHHhhcCCccccCCHHHHHH
Confidence 988888889999999999999999999998 8899999999999998743211111222333455678899999999999
Q ss_pred HHHHhccCCCC
Q 025672 239 AALYLASDAGQ 249 (249)
Q Consensus 239 ~v~~l~s~~a~ 249 (249)
+++||+++.++
T Consensus 230 ~~~~l~s~~~~ 240 (257)
T PRK08594 230 TAAFLFSDLSR 240 (257)
T ss_pred HHHHHcCcccc
Confidence 99999998753
|
|
| >PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-44 Score=293.66 Aligned_cols=234 Identities=29% Similarity=0.416 Sum_probs=203.8
Q ss_pred CCCCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHH
Q 025672 5 FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTI 84 (249)
Q Consensus 5 ~~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 84 (249)
++.+++++|+++|||+++|||++++++|+++|++|++++++. .++..+++...+.++.++++|++|+++++++++++.
T Consensus 3 ~~~~~l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~--~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 80 (253)
T PRK08993 3 LDAFSLEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVE--PTETIEQVTALGRRFLSLTADLRKIDGIPALLERAV 80 (253)
T ss_pred ccccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcc--hHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHH
Confidence 566789999999999999999999999999999999888754 244555565556678899999999999999999999
Q ss_pred HHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCc
Q 025672 85 NHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW 164 (249)
Q Consensus 85 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~ 164 (249)
+.++++|++|||||.....++.+.+.++|++.+++|+.+++.++++++|.|.+++. +|+||++||..+..+.+
T Consensus 81 ~~~~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~-------~g~iv~isS~~~~~~~~ 153 (253)
T PRK08993 81 AEFGHIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGN-------GGKIINIASMLSFQGGI 153 (253)
T ss_pred HHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCC-------CeEEEEECchhhccCCC
Confidence 99999999999999877777888899999999999999999999999999977532 38899999999988888
Q ss_pred cchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhc
Q 025672 165 YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLA 244 (249)
Q Consensus 165 ~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~ 244 (249)
....|+++|+|+++++++++.|+. ++||+||+|+||+++|++.......+...+.+.+..|.+|+.+|+|+++++.||+
T Consensus 154 ~~~~Y~~sKaa~~~~~~~la~e~~-~~gi~v~~v~pG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~eva~~~~~l~ 232 (253)
T PRK08993 154 RVPSYTASKSGVMGVTRLMANEWA-KHNINVNAIAPGYMATNNTQQLRADEQRSAEILDRIPAGRWGLPSDLMGPVVFLA 232 (253)
T ss_pred CCcchHHHHHHHHHHHHHHHHHhh-hhCeEEEEEeeCcccCcchhhhccchHHHHHHHhcCCCCCCcCHHHHHHHHHHHh
Confidence 889999999999999999999998 8899999999999998765432223333445566788999999999999999999
Q ss_pred cCCC
Q 025672 245 SDAG 248 (249)
Q Consensus 245 s~~a 248 (249)
|+.+
T Consensus 233 s~~~ 236 (253)
T PRK08993 233 SSAS 236 (253)
T ss_pred Cccc
Confidence 9875
|
|
| >PRK07478 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-44 Score=293.55 Aligned_cols=232 Identities=30% Similarity=0.397 Sum_probs=204.2
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
+.+++|+++||||++|||++++++|+++|++|++++|+.++++++.+++...+.++.++.+|++|+++++++++++.+.+
T Consensus 2 ~~~~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 81 (254)
T PRK07478 2 MRLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERF 81 (254)
T ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhc
Confidence 35789999999999999999999999999999999999998998888887777789999999999999999999999999
Q ss_pred CCccEEEEcCCCCC-CCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccc-ccCcc
Q 025672 88 GKLDILVNAAAGNF-LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY-TATWY 165 (249)
Q Consensus 88 ~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~-~~~~~ 165 (249)
+++|++|||||... ..++.+.+.++|+..+++|+.+++.++++++|.|.+++. ++||++||..+. .+.++
T Consensus 82 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~--------~~iv~~sS~~~~~~~~~~ 153 (254)
T PRK07478 82 GGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGG--------GSLIFTSTFVGHTAGFPG 153 (254)
T ss_pred CCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC--------ceEEEEechHhhccCCCC
Confidence 99999999999864 467778899999999999999999999999999987653 889999998876 46778
Q ss_pred chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhcc
Q 025672 166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245 (249)
Q Consensus 166 ~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s 245 (249)
...|++||+++.+++++++.|++ ++||+||+|+||+++|++.......++.........|.+++.+|+|++++++||++
T Consensus 154 ~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s 232 (254)
T PRK07478 154 MAAYAASKAGLIGLTQVLAAEYG-AQGIRVNALLPGGTDTPMGRAMGDTPEALAFVAGLHALKRMAQPEEIAQAALFLAS 232 (254)
T ss_pred cchhHHHHHHHHHHHHHHHHHHh-hcCEEEEEEeeCcccCcccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcC
Confidence 89999999999999999999998 88999999999999988544332223333344555678899999999999999999
Q ss_pred CCC
Q 025672 246 DAG 248 (249)
Q Consensus 246 ~~a 248 (249)
+.+
T Consensus 233 ~~~ 235 (254)
T PRK07478 233 DAA 235 (254)
T ss_pred chh
Confidence 764
|
|
| >PLN02730 enoyl-[acyl-carrier-protein] reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-44 Score=298.96 Aligned_cols=231 Identities=27% Similarity=0.261 Sum_probs=193.8
Q ss_pred CCCCCCcEEEEecC--CCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhc----------CC---CeeEEEccC-
Q 025672 7 GDILKGKVALLTGG--GSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL----------GI---PAIGLEGDV- 70 (249)
Q Consensus 7 ~~~l~~k~~lItGa--~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~----------~~---~~~~~~~Dl- 70 (249)
.++++||++||||+ ++|||+++|+.|++.|++|++ +|+.++++++..++... +. ....+.+|+
T Consensus 4 ~~~l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 82 (303)
T PLN02730 4 PIDLRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAV 82 (303)
T ss_pred CcCCCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeeccee
Confidence 45589999999999 899999999999999999999 88888888887766421 11 146788999
Q ss_pred -CC------------------HHHHHHHHHHHHHHhCCccEEEEcCCCCC--CCCCCCCCHHHHHHHHhhhhHHHHHHHH
Q 025672 71 -RK------------------REDAVRVVESTINHFGKLDILVNAAAGNF--LVPAEDLSPNGFRTVIEIDSVGTFIMCH 129 (249)
Q Consensus 71 -~~------------------~~~~~~~~~~~~~~~~~id~vi~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~ 129 (249)
++ +++++++++++.+.+|++|++|||||... ..++.+.+.++|++++++|+.+++.+++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~~ 162 (303)
T PLN02730 83 FDTPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQ 162 (303)
T ss_pred cCccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHHH
Confidence 43 44899999999999999999999998543 3688899999999999999999999999
Q ss_pred HHHHHHHhcCCCCCCCCCCceEEEeccccccccCccc-hhhHHHHHHHHHHHHHHHHHhcCC-CCeEEEEEecCcccccc
Q 025672 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ-IHVSAAKAAVDSITRSLALEWGTD-YAIRVNGIAPGPIKDTA 207 (249)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~-~~y~~sK~a~~~l~~~la~e~~~~-~gi~v~~v~pG~v~t~~ 207 (249)
+++|.|.++ |+||++||..+..+.++. ..|++||+|+.+|+++|+.|++ + +|||||+|+||+++|++
T Consensus 163 ~~~p~m~~~----------G~II~isS~a~~~~~p~~~~~Y~asKaAl~~l~~~la~El~-~~~gIrVn~V~PG~v~T~~ 231 (303)
T PLN02730 163 HFGPIMNPG----------GASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAG-RKYKIRVNTISAGPLGSRA 231 (303)
T ss_pred HHHHHHhcC----------CEEEEEechhhcCCCCCCchhhHHHHHHHHHHHHHHHHHhC-cCCCeEEEEEeeCCccCch
Confidence 999999653 889999999988887765 5899999999999999999997 6 79999999999999886
Q ss_pred ccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhccCCCC
Q 025672 208 GVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGQ 249 (249)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~a~ 249 (249)
.......++..+......|++|+.+|+|++.+++||+|++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~pl~r~~~peevA~~~~fLaS~~a~ 273 (303)
T PLN02730 232 AKAIGFIDDMIEYSYANAPLQKELTADEVGNAAAFLASPLAS 273 (303)
T ss_pred hhcccccHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcccc
Confidence 543212233333334556888999999999999999998753
|
|
| >PRK06114 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-44 Score=291.72 Aligned_cols=233 Identities=30% Similarity=0.423 Sum_probs=203.2
Q ss_pred CCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcc-hHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHH
Q 025672 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT-VLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN 85 (249)
Q Consensus 7 ~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~-~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 85 (249)
.+++++|+++||||++|||++++++|+++|++|++++|+.+ .++++.+++...+.++.++++|++|+++++++++++.+
T Consensus 3 ~~~~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~ 82 (254)
T PRK06114 3 LFDLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEA 82 (254)
T ss_pred ccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 34588999999999999999999999999999999999764 45777777776677889999999999999999999999
Q ss_pred HhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCcc
Q 025672 86 HFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY 165 (249)
Q Consensus 86 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~ 165 (249)
.++++|++|||||.....++.+.+.++|++.+++|+.+++.+++++++.|.++.. ++||++||..+..+.+.
T Consensus 83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--------~~iv~isS~~~~~~~~~ 154 (254)
T PRK06114 83 ELGALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGG--------GSIVNIASMSGIIVNRG 154 (254)
T ss_pred HcCCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCC--------cEEEEECchhhcCCCCC
Confidence 9999999999999877777888899999999999999999999999999976543 88999999988766543
Q ss_pred --chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHh
Q 025672 166 --QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYL 243 (249)
Q Consensus 166 --~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l 243 (249)
...|+++|+|+.+++++++.|++ ++||+||+|+||+++|++... ....+..+.+....|++|+++|||+++++.||
T Consensus 155 ~~~~~Y~~sKaa~~~l~~~la~e~~-~~gi~v~~v~PG~i~t~~~~~-~~~~~~~~~~~~~~p~~r~~~~~dva~~~~~l 232 (254)
T PRK06114 155 LLQAHYNASKAGVIHLSKSLAMEWV-GRGIRVNSISPGYTATPMNTR-PEMVHQTKLFEEQTPMQRMAKVDEMVGPAVFL 232 (254)
T ss_pred CCcchHHHHHHHHHHHHHHHHHHHh-hcCeEEEEEeecCccCccccc-ccchHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence 68899999999999999999998 899999999999999876432 11122334556678999999999999999999
Q ss_pred ccCCCC
Q 025672 244 ASDAGQ 249 (249)
Q Consensus 244 ~s~~a~ 249 (249)
+++.++
T Consensus 233 ~s~~~~ 238 (254)
T PRK06114 233 LSDAAS 238 (254)
T ss_pred cCcccc
Confidence 998753
|
|
| >PRK08159 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-44 Score=296.15 Aligned_cols=230 Identities=25% Similarity=0.260 Sum_probs=190.0
Q ss_pred CCCCCCCcEEEEecCC--CchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHH-hcCCCeeEEEccCCCHHHHHHHHHH
Q 025672 6 KGDILKGKVALLTGGG--SGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALH-SLGIPAIGLEGDVRKREDAVRVVES 82 (249)
Q Consensus 6 ~~~~l~~k~~lItGa~--~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~ 82 (249)
....+++|++|||||+ +|||+++|++|+++|++|++++|+.. ..+..+++. +.+ ...++++|++|++++++++++
T Consensus 4 ~~~~~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~-~~~~~~~l~~~~~-~~~~~~~Dl~~~~~v~~~~~~ 81 (272)
T PRK08159 4 ASGLMAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDA-LKKRVEPLAAELG-AFVAGHCDVTDEASIDAVFET 81 (272)
T ss_pred ccccccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchH-HHHHHHHHHHhcC-CceEEecCCCCHHHHHHHHHH
Confidence 3456789999999997 89999999999999999999988742 222222232 223 356789999999999999999
Q ss_pred HHHHhCCccEEEEcCCCCCC----CCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccc
Q 025672 83 TINHFGKLDILVNAAAGNFL----VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL 158 (249)
Q Consensus 83 ~~~~~~~id~vi~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~ 158 (249)
+.++++++|++|||||+... .++.+.+.++|+..+++|+.+++.++++++|.|.+ +|+||++||..
T Consensus 82 ~~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~----------~g~Iv~iss~~ 151 (272)
T PRK08159 82 LEKKWGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTD----------GGSILTLTYYG 151 (272)
T ss_pred HHHhcCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCC----------CceEEEEeccc
Confidence 99999999999999997642 56778899999999999999999999999999853 28899999998
Q ss_pred ccccCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHH
Q 025672 159 HYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAM 238 (249)
Q Consensus 159 ~~~~~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~ 238 (249)
+..+.+++..|++||+|+.+|+++|+.|++ ++||+||+|+||+++|++.......+...+......|++|+.+|||+|+
T Consensus 152 ~~~~~p~~~~Y~asKaal~~l~~~la~el~-~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~ 230 (272)
T PRK08159 152 AEKVMPHYNVMGVAKAALEASVKYLAVDLG-PKNIRVNAISAGPIKTLAASGIGDFRYILKWNEYNAPLRRTVTIEEVGD 230 (272)
T ss_pred cccCCCcchhhhhHHHHHHHHHHHHHHHhc-ccCeEEEEeecCCcCCHHHhcCCcchHHHHHHHhCCcccccCCHHHHHH
Confidence 888888899999999999999999999998 8999999999999998643221111122222233578899999999999
Q ss_pred HHHHhccCCC
Q 025672 239 AALYLASDAG 248 (249)
Q Consensus 239 ~v~~l~s~~a 248 (249)
+++||+|+++
T Consensus 231 ~~~~L~s~~~ 240 (272)
T PRK08159 231 SALYLLSDLS 240 (272)
T ss_pred HHHHHhCccc
Confidence 9999999875
|
|
| >PRK08085 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-44 Score=292.04 Aligned_cols=232 Identities=28% Similarity=0.372 Sum_probs=209.0
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
+++++|++|||||++|||++++++|+++|++|++++|+.+++++..+++...+.++.++.+|++|+++++++++++.+.+
T Consensus 5 ~~l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 84 (254)
T PRK08085 5 FSLAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDI 84 (254)
T ss_pred ccCCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhc
Confidence 46789999999999999999999999999999999999988888888887667778899999999999999999999999
Q ss_pred CCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch
Q 025672 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 167 (249)
Q Consensus 88 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~ 167 (249)
+++|++|||+|.....++.+.+.++|++.+++|+.+++.+++++.+.+.+++. ++||++||..+..+.++..
T Consensus 85 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--------~~iv~isS~~~~~~~~~~~ 156 (254)
T PRK08085 85 GPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQA--------GKIINICSMQSELGRDTIT 156 (254)
T ss_pred CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCC--------cEEEEEccchhccCCCCCc
Confidence 99999999999877778888899999999999999999999999999976543 8899999998888888889
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhccCC
Q 025672 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247 (249)
Q Consensus 168 ~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~ 247 (249)
.|+++|++++++++++++|++ ++||++|+|+||+++|++.......++..+......|++++++|||+++++.||+++.
T Consensus 157 ~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~~~~l~~~~ 235 (254)
T PRK08085 157 PYAASKGAVKMLTRGMCVELA-RHNIQVNGIAPGYFKTEMTKALVEDEAFTAWLCKRTPAARWGDPQELIGAAVFLSSKA 235 (254)
T ss_pred chHHHHHHHHHHHHHHHHHHH-hhCeEEEEEEeCCCCCcchhhhccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcc
Confidence 999999999999999999998 8999999999999998865543333444455566788999999999999999999987
Q ss_pred C
Q 025672 248 G 248 (249)
Q Consensus 248 a 248 (249)
+
T Consensus 236 ~ 236 (254)
T PRK08085 236 S 236 (254)
T ss_pred c
Confidence 5
|
|
| >KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-44 Score=292.19 Aligned_cols=235 Identities=37% Similarity=0.488 Sum_probs=202.2
Q ss_pred CCCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcC---CCeeEEEccCCCHHHHHHHHHH
Q 025672 6 KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG---IPAIGLEGDVRKREDAVRVVES 82 (249)
Q Consensus 6 ~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dl~~~~~~~~~~~~ 82 (249)
+...+++|+++|||+++|||+++|++|++.|++|++++|+.+.++....++...+ .++..+.||++++++++.+++.
T Consensus 2 ~~~~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~ 81 (270)
T KOG0725|consen 2 SGGRLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEF 81 (270)
T ss_pred CCccCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHH
Confidence 3567899999999999999999999999999999999999999999888886543 4599999999999999999999
Q ss_pred HHHH-hCCccEEEEcCCCCCCC-CCCCCCHHHHHHHHhhhhHH-HHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccc
Q 025672 83 TINH-FGKLDILVNAAAGNFLV-PAEDLSPNGFRTVIEIDSVG-TFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH 159 (249)
Q Consensus 83 ~~~~-~~~id~vi~~ag~~~~~-~~~~~~~~~~~~~~~~n~~~-~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~ 159 (249)
..+. +|++|++|||||..... ++.+.++++|++++++|+.| .+.+.+++.+.+.+.+ +|.|+++||..+
T Consensus 82 ~~~~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~--------gg~I~~~ss~~~ 153 (270)
T KOG0725|consen 82 AVEKFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSK--------GGSIVNISSVAG 153 (270)
T ss_pred HHHHhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcC--------CceEEEEecccc
Confidence 9998 69999999999988754 78999999999999999995 5556666666666644 488999999999
Q ss_pred cccCccc-hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCCh---HHHHHh--hhhhhcccCCCCH
Q 025672 160 YTATWYQ-IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP---EEIRSK--ATDYMAAYKFGEK 233 (249)
Q Consensus 160 ~~~~~~~-~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~---~~~~~~--~~~~~~~~~~~~~ 233 (249)
..+.++. .+|+++|+|+++|+|++|.||+ ++|||||+|+||.+.|+........ +++.+. .....|.+|+++|
T Consensus 154 ~~~~~~~~~~Y~~sK~al~~ltr~lA~El~-~~gIRvN~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~p~gr~g~~ 232 (270)
T KOG0725|consen 154 VGPGPGSGVAYGVSKAALLQLTRSLAKELA-KHGIRVNSVSPGLVKTSLRAAGLDDGEMEEFKEATDSKGAVPLGRVGTP 232 (270)
T ss_pred ccCCCCCcccchhHHHHHHHHHHHHHHHHh-hcCcEEEEeecCcEeCCccccccccchhhHHhhhhccccccccCCccCH
Confidence 8886666 7999999999999999999999 9999999999999998762222222 344443 4456789999999
Q ss_pred HHHHHHHHHhccCCCC
Q 025672 234 WDIAMAALYLASDAGQ 249 (249)
Q Consensus 234 ~dva~~v~~l~s~~a~ 249 (249)
+|+++.+.||+++.++
T Consensus 233 ~eva~~~~fla~~~as 248 (270)
T KOG0725|consen 233 EEVAEAAAFLASDDAS 248 (270)
T ss_pred HHHHHhHHhhcCcccc
Confidence 9999999999999875
|
|
| >PRK06997 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-44 Score=293.71 Aligned_cols=226 Identities=23% Similarity=0.227 Sum_probs=185.4
Q ss_pred CCCcEEEEecC--CCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHH-hcCCCeeEEEccCCCHHHHHHHHHHHHHH
Q 025672 10 LKGKVALLTGG--GSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALH-SLGIPAIGLEGDVRKREDAVRVVESTINH 86 (249)
Q Consensus 10 l~~k~~lItGa--~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 86 (249)
+++|+++|||| ++|||+++|++|+++|++|++++|.....+.+ +++. ..+. ..++++|++|+++++++++++.+.
T Consensus 4 l~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~Dv~d~~~v~~~~~~~~~~ 81 (260)
T PRK06997 4 LAGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRI-TEFAAEFGS-DLVFPCDVASDEQIDALFASLGQH 81 (260)
T ss_pred cCCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHH-HHHHHhcCC-cceeeccCCCHHHHHHHHHHHHHH
Confidence 67999999996 68999999999999999999987642222222 2222 2232 357899999999999999999999
Q ss_pred hCCccEEEEcCCCCCCC----C-CCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc
Q 025672 87 FGKLDILVNAAAGNFLV----P-AEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT 161 (249)
Q Consensus 87 ~~~id~vi~~ag~~~~~----~-~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~ 161 (249)
++++|++|||||..... + +.+.+.++|+..+++|+.+++.++++++|+|.+ .|+||++||..+..
T Consensus 82 ~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~----------~g~Ii~iss~~~~~ 151 (260)
T PRK06997 82 WDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSD----------DASLLTLSYLGAER 151 (260)
T ss_pred hCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCC----------CceEEEEecccccc
Confidence 99999999999976432 2 346788999999999999999999999999943 27899999999888
Q ss_pred cCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHH
Q 025672 162 ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAAL 241 (249)
Q Consensus 162 ~~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~ 241 (249)
+.+....|++||+|+.+|++++++|++ ++||+||+|+||+++|++.......++..+......|++|+++||||++++.
T Consensus 152 ~~~~~~~Y~asKaal~~l~~~la~el~-~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~~~ 230 (260)
T PRK06997 152 VVPNYNTMGLAKASLEASVRYLAVSLG-PKGIRANGISAGPIKTLAASGIKDFGKILDFVESNAPLRRNVTIEEVGNVAA 230 (260)
T ss_pred CCCCcchHHHHHHHHHHHHHHHHHHhc-ccCeEEEEEeeCccccchhccccchhhHHHHHHhcCcccccCCHHHHHHHHH
Confidence 888889999999999999999999998 8899999999999998643221111233334455678999999999999999
Q ss_pred HhccCCC
Q 025672 242 YLASDAG 248 (249)
Q Consensus 242 ~l~s~~a 248 (249)
||+|+++
T Consensus 231 ~l~s~~~ 237 (260)
T PRK06997 231 FLLSDLA 237 (260)
T ss_pred HHhCccc
Confidence 9999875
|
|
| >PRK07062 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-44 Score=292.71 Aligned_cols=233 Identities=26% Similarity=0.321 Sum_probs=203.5
Q ss_pred CCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhc--CCCeeEEEccCCCHHHHHHHHHHHH
Q 025672 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVESTI 84 (249)
Q Consensus 7 ~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~ 84 (249)
..++++|+++||||++|||++++++|+++|++|++++|+.+++++..+++... +.++.++.+|++|+++++++++++.
T Consensus 3 ~~~l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~ 82 (265)
T PRK07062 3 QIQLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVE 82 (265)
T ss_pred ccccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHH
Confidence 34688999999999999999999999999999999999998888888777654 3468899999999999999999999
Q ss_pred HHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCc
Q 025672 85 NHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW 164 (249)
Q Consensus 85 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~ 164 (249)
+.++++|++|||||.....++.+.+.++|.+.+++|+.+++.++++++|.|.+++. |+||++||..+..+.+
T Consensus 83 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~--------g~iv~isS~~~~~~~~ 154 (265)
T PRK07062 83 ARFGGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAA--------ASIVCVNSLLALQPEP 154 (265)
T ss_pred HhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCC--------cEEEEeccccccCCCC
Confidence 99999999999999877778888999999999999999999999999999987643 8899999999998888
Q ss_pred cchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCC--------ChHHHHHhh--hhhhcccCCCCHH
Q 025672 165 YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL--------APEEIRSKA--TDYMAAYKFGEKW 234 (249)
Q Consensus 165 ~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~--------~~~~~~~~~--~~~~~~~~~~~~~ 234 (249)
....|+++|+|+.+|+++++.|++ ++||+||+|+||+++|++..... ..+...+.+ ....|++|+++|+
T Consensus 155 ~~~~y~asKaal~~~~~~la~e~~-~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~ 233 (265)
T PRK07062 155 HMVATSAARAGLLNLVKSLATELA-PKGVRVNSILLGLVESGQWRRRYEARADPGQSWEAWTAALARKKGIPLGRLGRPD 233 (265)
T ss_pred CchHhHHHHHHHHHHHHHHHHHhh-hcCeEEEEEecCccccchhhhHHHHhhccCCChHHHHHHHhhcCCCCcCCCCCHH
Confidence 899999999999999999999998 88999999999999987543211 111222222 2457889999999
Q ss_pred HHHHHHHHhccCCC
Q 025672 235 DIAMAALYLASDAG 248 (249)
Q Consensus 235 dva~~v~~l~s~~a 248 (249)
|+++++.||+++.+
T Consensus 234 ~va~~~~~L~s~~~ 247 (265)
T PRK07062 234 EAARALFFLASPLS 247 (265)
T ss_pred HHHHHHHHHhCchh
Confidence 99999999999865
|
|
| >PRK08589 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-43 Score=292.42 Aligned_cols=229 Identities=28% Similarity=0.387 Sum_probs=199.9
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhC
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 88 (249)
.+++|++|||||++|||++++++|+++|++|++++|+ +++++..+++...+.++.++++|++++++++++++++.+.++
T Consensus 3 ~l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 81 (272)
T PRK08589 3 RLENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFG 81 (272)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence 3679999999999999999999999999999999999 778888888876677899999999999999999999999999
Q ss_pred CccEEEEcCCCCC-CCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch
Q 025672 89 KLDILVNAAAGNF-LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 167 (249)
Q Consensus 89 ~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~ 167 (249)
++|++|||||... ..++.+.+.+.|++.+++|+.+++.++++++|.|.++ +|+||++||..+..+.++..
T Consensus 82 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~---------~g~iv~isS~~~~~~~~~~~ 152 (272)
T PRK08589 82 RVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQ---------GGSIINTSSFSGQAADLYRS 152 (272)
T ss_pred CcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc---------CCEEEEeCchhhcCCCCCCc
Confidence 9999999999864 3567788899999999999999999999999999765 27899999999998888899
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCC--hHHHH----HhhhhhhcccCCCCHHHHHHHHH
Q 025672 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA--PEEIR----SKATDYMAAYKFGEKWDIAMAAL 241 (249)
Q Consensus 168 ~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~--~~~~~----~~~~~~~~~~~~~~~~dva~~v~ 241 (249)
.|++||+|+++|++++++|++ ++||+||+|+||+|+|++...... ++... .......|++|+.+|+|++++++
T Consensus 153 ~Y~asKaal~~l~~~la~e~~-~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~ 231 (272)
T PRK08589 153 GYNAAKGAVINFTKSIAIEYG-RDGIRANAIAPGTIETPLVDKLTGTSEDEAGKTFRENQKWMTPLGRLGKPEEVAKLVV 231 (272)
T ss_pred hHHHHHHHHHHHHHHHHHHhh-hcCeEEEEEecCcccCchhhhhcccchhhHHHHHhhhhhccCCCCCCcCHHHHHHHHH
Confidence 999999999999999999998 889999999999999876433211 11111 12223468889999999999999
Q ss_pred HhccCCC
Q 025672 242 YLASDAG 248 (249)
Q Consensus 242 ~l~s~~a 248 (249)
||+++.+
T Consensus 232 ~l~s~~~ 238 (272)
T PRK08589 232 FLASDDS 238 (272)
T ss_pred HHcCchh
Confidence 9999764
|
|
| >PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-43 Score=289.03 Aligned_cols=233 Identities=31% Similarity=0.422 Sum_probs=205.7
Q ss_pred CCCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHH
Q 025672 6 KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN 85 (249)
Q Consensus 6 ~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 85 (249)
+.+.+++|++|||||++|||++++++|+++|++|++++|+ ++.+++.+.+...+.++.++++|++++++++++++++.+
T Consensus 9 ~~~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~ 87 (258)
T PRK06935 9 DFFSLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALE 87 (258)
T ss_pred ccccCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 4456889999999999999999999999999999999998 667777777766677889999999999999999999999
Q ss_pred HhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCcc
Q 025672 86 HFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY 165 (249)
Q Consensus 86 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~ 165 (249)
.++++|++|||+|.....++.+.+.++|++.+++|+.+++.++++++|+|.+++. |+||++||..+..+.+.
T Consensus 88 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~--------g~iv~isS~~~~~~~~~ 159 (258)
T PRK06935 88 EFGKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGS--------GKIINIASMLSFQGGKF 159 (258)
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCC--------eEEEEECCHHhccCCCC
Confidence 9999999999999877677788889999999999999999999999999987653 88999999999888888
Q ss_pred chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhcc
Q 025672 166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245 (249)
Q Consensus 166 ~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s 245 (249)
.+.|+++|++++++++++++|++ ++||+||+|+||+++|+........+...+......|.+|+.+|+|+++++.||++
T Consensus 160 ~~~Y~asK~a~~~~~~~la~e~~-~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s 238 (258)
T PRK06935 160 VPAYTASKHGVAGLTKAFANELA-AYNIQVNAIAPGYIKTANTAPIRADKNRNDEILKRIPAGRWGEPDDLMGAAVFLAS 238 (258)
T ss_pred chhhHHHHHHHHHHHHHHHHHhh-hhCeEEEEEEeccccccchhhcccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHcC
Confidence 99999999999999999999998 88999999999999987643332223333445566788999999999999999999
Q ss_pred CCC
Q 025672 246 DAG 248 (249)
Q Consensus 246 ~~a 248 (249)
+++
T Consensus 239 ~~~ 241 (258)
T PRK06935 239 RAS 241 (258)
T ss_pred hhh
Confidence 875
|
|
| >PRK07523 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-43 Score=287.78 Aligned_cols=235 Identities=27% Similarity=0.412 Sum_probs=210.6
Q ss_pred CCCCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHH
Q 025672 5 FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTI 84 (249)
Q Consensus 5 ~~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 84 (249)
|..+++++|++|||||++|||++++++|+++|++|++++|+++++++..+++...+.++.++++|++|+++++++++++.
T Consensus 3 ~~~~~~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 82 (255)
T PRK07523 3 LNLFDLTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFE 82 (255)
T ss_pred ccccCCCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHH
Confidence 55567899999999999999999999999999999999999988888888887667779999999999999999999999
Q ss_pred HHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCc
Q 025672 85 NHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW 164 (249)
Q Consensus 85 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~ 164 (249)
+.++++|+||||+|.....++.+.+.++|++.+++|+.+++++++++.+.|.++.. |+||++||..+..+.+
T Consensus 83 ~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--------g~iv~iss~~~~~~~~ 154 (255)
T PRK07523 83 AEIGPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGA--------GKIINIASVQSALARP 154 (255)
T ss_pred HhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCC--------eEEEEEccchhccCCC
Confidence 99999999999999887778888899999999999999999999999999987643 8899999998888888
Q ss_pred cchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhc
Q 025672 165 YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLA 244 (249)
Q Consensus 165 ~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~ 244 (249)
+...|+++|+++.+++++++.|++ ++||+||+|.||+++|+........+...+.+....|.+|+++|+|+|++++||+
T Consensus 155 ~~~~y~~sK~a~~~~~~~~a~e~~-~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~ 233 (255)
T PRK07523 155 GIAPYTATKGAVGNLTKGMATDWA-KHGLQCNAIAPGYFDTPLNAALVADPEFSAWLEKRTPAGRWGKVEELVGACVFLA 233 (255)
T ss_pred CCccHHHHHHHHHHHHHHHHHHhh-HhCeEEEEEEECcccCchhhhhccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHc
Confidence 899999999999999999999998 8899999999999998764433333444555667788999999999999999999
Q ss_pred cCCC
Q 025672 245 SDAG 248 (249)
Q Consensus 245 s~~a 248 (249)
++++
T Consensus 234 ~~~~ 237 (255)
T PRK07523 234 SDAS 237 (255)
T ss_pred Cchh
Confidence 9864
|
|
| >PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-43 Score=289.86 Aligned_cols=232 Identities=25% Similarity=0.349 Sum_probs=200.6
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeC-CcchHHHHHHHHHh-cCCCeeEEEccCCCHHHHHHHHHHHHH
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGR-RKTVLRSAVAALHS-LGIPAIGLEGDVRKREDAVRVVESTIN 85 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r-~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 85 (249)
.++++|+++||||++|||++++++|+++|++|++++| +.+.++...+++.. .+.++.++.+|++|+++++++++++.+
T Consensus 4 ~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 83 (260)
T PRK08416 4 NEMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDE 83 (260)
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 4578999999999999999999999999999998865 55566666666653 356789999999999999999999999
Q ss_pred HhCCccEEEEcCCCCC------CCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccc
Q 025672 86 HFGKLDILVNAAAGNF------LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH 159 (249)
Q Consensus 86 ~~~~id~vi~~ag~~~------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~ 159 (249)
.++++|++|||||... ..++.+.+.+++.+.+++|+.+++.+++.++|.|.+.+ .|+||++||..+
T Consensus 84 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--------~g~iv~isS~~~ 155 (260)
T PRK08416 84 DFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVG--------GGSIISLSSTGN 155 (260)
T ss_pred hcCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccC--------CEEEEEEecccc
Confidence 9999999999998642 24566788899999999999999999999999998754 388999999988
Q ss_pred cccCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHH
Q 025672 160 YTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMA 239 (249)
Q Consensus 160 ~~~~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~ 239 (249)
..+.++...|++||+|+++|+++++.|++ ++||+||+|+||+++|++.......++..+.+....|.+|+.+|+|++++
T Consensus 156 ~~~~~~~~~Y~asK~a~~~~~~~la~el~-~~gi~v~~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~r~~~p~~va~~ 234 (260)
T PRK08416 156 LVYIENYAGHGTSKAAVETMVKYAATELG-EKNIRVNAVSGGPIDTDALKAFTNYEEVKAKTEELSPLNRMGQPEDLAGA 234 (260)
T ss_pred ccCCCCcccchhhHHHHHHHHHHHHHHhh-hhCeEEEEEeeCcccChhhhhccCCHHHHHHHHhcCCCCCCCCHHHHHHH
Confidence 88888899999999999999999999998 89999999999999988644333334555556666788999999999999
Q ss_pred HHHhccCCC
Q 025672 240 ALYLASDAG 248 (249)
Q Consensus 240 v~~l~s~~a 248 (249)
++||+++.+
T Consensus 235 ~~~l~~~~~ 243 (260)
T PRK08416 235 CLFLCSEKA 243 (260)
T ss_pred HHHHcChhh
Confidence 999999764
|
|
| >PRK07889 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-43 Score=289.39 Aligned_cols=225 Identities=24% Similarity=0.235 Sum_probs=187.9
Q ss_pred CCCCcEEEEecC--CCchhHHHHHHHHHcCCeEEEEeCCc--chHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHH
Q 025672 9 ILKGKVALLTGG--GSGIGFEISLQLGKHGAAIAIMGRRK--TVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTI 84 (249)
Q Consensus 9 ~l~~k~~lItGa--~~giG~~~a~~l~~~G~~v~l~~r~~--~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 84 (249)
++++|+++|||+ ++|||+++|++|+++|++|++++|+. +.++++.+++ +.++.++++|++|+++++++++++.
T Consensus 4 ~~~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~i~~~~~~~~ 80 (256)
T PRK07889 4 LLEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRL---PEPAPVLELDVTNEEHLASLADRVR 80 (256)
T ss_pred cccCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhc---CCCCcEEeCCCCCHHHHHHHHHHHH
Confidence 478999999999 89999999999999999999999864 3345554444 3367789999999999999999999
Q ss_pred HHhCCccEEEEcCCCCCC----CCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccc
Q 025672 85 NHFGKLDILVNAAAGNFL----VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY 160 (249)
Q Consensus 85 ~~~~~id~vi~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~ 160 (249)
+.++++|++|||||+... .++.+.+.++|++.+++|+.+++.++++++|.|.+ +|+||++++. +.
T Consensus 81 ~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~----------~g~Iv~is~~-~~ 149 (256)
T PRK07889 81 EHVDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNE----------GGSIVGLDFD-AT 149 (256)
T ss_pred HHcCCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhccc----------CceEEEEeec-cc
Confidence 999999999999998643 35677888999999999999999999999999963 2789999865 34
Q ss_pred ccCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhccc-CCCCHHHHHHH
Q 025672 161 TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAY-KFGEKWDIAMA 239 (249)
Q Consensus 161 ~~~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~dva~~ 239 (249)
.+.+.+..|++||+|+.+|+++|+.|++ ++||+||+|+||+++|++.......++..+.+.+..|++ |+.+|+|+|++
T Consensus 150 ~~~~~~~~Y~asKaal~~l~~~la~el~-~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~~p~evA~~ 228 (256)
T PRK07889 150 VAWPAYDWMGVAKAALESTNRYLARDLG-PRGIRVNLVAAGPIRTLAAKAIPGFELLEEGWDERAPLGWDVKDPTPVARA 228 (256)
T ss_pred ccCCccchhHHHHHHHHHHHHHHHHHhh-hcCeEEEeeccCcccChhhhcccCcHHHHHHHHhcCccccccCCHHHHHHH
Confidence 4556778899999999999999999998 899999999999999875433222233334445567777 68999999999
Q ss_pred HHHhccCCC
Q 025672 240 ALYLASDAG 248 (249)
Q Consensus 240 v~~l~s~~a 248 (249)
++||+++.+
T Consensus 229 v~~l~s~~~ 237 (256)
T PRK07889 229 VVALLSDWF 237 (256)
T ss_pred HHHHhCccc
Confidence 999999865
|
|
| >PRK07985 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-43 Score=292.11 Aligned_cols=229 Identities=28% Similarity=0.365 Sum_probs=199.8
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCc--chHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHH
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK--TVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~--~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 86 (249)
.+++|+++||||++|||++++++|+++|++|++++|+. +..+++.+.+...+.++.++.+|++|+++++++++++.+.
T Consensus 46 ~~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 125 (294)
T PRK07985 46 RLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKA 125 (294)
T ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence 47899999999999999999999999999999988753 3456666666666777889999999999999999999999
Q ss_pred hCCccEEEEcCCCCC-CCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCcc
Q 025672 87 FGKLDILVNAAAGNF-LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY 165 (249)
Q Consensus 87 ~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~ 165 (249)
++++|++|||||... ..++.+.+.++|++.+++|+.+++.++++++|.|.+. ++||++||..+..+.+.
T Consensus 126 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~----------g~iv~iSS~~~~~~~~~ 195 (294)
T PRK07985 126 LGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKG----------ASIITTSSIQAYQPSPH 195 (294)
T ss_pred hCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcC----------CEEEEECCchhccCCCC
Confidence 999999999999753 4567788999999999999999999999999998642 78999999999988888
Q ss_pred chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhcc
Q 025672 166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245 (249)
Q Consensus 166 ~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s 245 (249)
...|+++|+|+.+|+++++.|++ ++||+||+|+||+|+|++......+++..+.+....|++|+++|+|+|++++||++
T Consensus 196 ~~~Y~asKaal~~l~~~la~el~-~~gIrvn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~pedva~~~~fL~s 274 (294)
T PRK07985 196 LLDYAATKAAILNYSRGLAKQVA-EKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMKRAGQPAELAPVYVYLAS 274 (294)
T ss_pred cchhHHHHHHHHHHHHHHHHHHh-HhCcEEEEEECCcCccccccccCCCHHHHHHHhccCCCCCCCCHHHHHHHHHhhhC
Confidence 89999999999999999999998 88999999999999988643222233444456667889999999999999999999
Q ss_pred CCC
Q 025672 246 DAG 248 (249)
Q Consensus 246 ~~a 248 (249)
+++
T Consensus 275 ~~~ 277 (294)
T PRK07985 275 QES 277 (294)
T ss_pred hhc
Confidence 875
|
|
| >PRK08303 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-43 Score=295.74 Aligned_cols=231 Identities=24% Similarity=0.283 Sum_probs=191.4
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCc----------chHHHHHHHHHhcCCCeeEEEccCCCHHHHH
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK----------TVLRSAVAALHSLGIPAIGLEGDVRKREDAV 77 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~----------~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~ 77 (249)
.++++|+++||||++|||+++|++|++.|++|++++|+. +.++.+.+++...+.++.+++||++|+++++
T Consensus 4 ~~l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~ 83 (305)
T PRK08303 4 KPLRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVR 83 (305)
T ss_pred cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHH
Confidence 347899999999999999999999999999999999984 4566677777766677889999999999999
Q ss_pred HHHHHHHHHhCCccEEEEcC-CCCC----CCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEE
Q 025672 78 RVVESTINHFGKLDILVNAA-AGNF----LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIII 152 (249)
Q Consensus 78 ~~~~~~~~~~~~id~vi~~a-g~~~----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv 152 (249)
++++++.+.+|++|++|||| |... ..++.+.+.++|.+.+++|+.+++.++++++|.|.++. +|+||
T Consensus 84 ~~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~--------~g~IV 155 (305)
T PRK08303 84 ALVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRP--------GGLVV 155 (305)
T ss_pred HHHHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCC--------CcEEE
Confidence 99999999999999999999 7531 25677788899999999999999999999999997654 38999
Q ss_pred Eeccccccc---cCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCC--ChHHHHHhhhhhhc-
Q 025672 153 NISATLHYT---ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL--APEEIRSKATDYMA- 226 (249)
Q Consensus 153 ~iss~~~~~---~~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~--~~~~~~~~~~~~~~- 226 (249)
++||..+.. +.++...|++||+|+.+|+++|+.|++ ++|||||+|+||+++|++..... .++...+. ....|
T Consensus 156 ~isS~~~~~~~~~~~~~~~Y~asKaal~~lt~~La~el~-~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~-~~~~p~ 233 (305)
T PRK08303 156 EITDGTAEYNATHYRLSVFYDLAKTSVNRLAFSLAHELA-PHGATAVALTPGWLRSEMMLDAFGVTEENWRDA-LAKEPH 233 (305)
T ss_pred EECCccccccCcCCCCcchhHHHHHHHHHHHHHHHHHhh-hcCcEEEEecCCccccHHHHHhhccCccchhhh-hccccc
Confidence 999976543 233567899999999999999999998 89999999999999987643211 11122121 22345
Q ss_pred ccCCCCHHHHHHHHHHhccCCC
Q 025672 227 AYKFGEKWDIAMAALYLASDAG 248 (249)
Q Consensus 227 ~~~~~~~~dva~~v~~l~s~~a 248 (249)
.++..+|||++++++||+++++
T Consensus 234 ~~~~~~peevA~~v~fL~s~~~ 255 (305)
T PRK08303 234 FAISETPRYVGRAVAALAADPD 255 (305)
T ss_pred cccCCCHHHHHHHHHHHHcCcc
Confidence 4678899999999999999863
|
|
| >KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-44 Score=287.64 Aligned_cols=194 Identities=31% Similarity=0.443 Sum_probs=178.4
Q ss_pred CCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcC-C-CeeEEEccCCCHHHHHHHHHHHH
Q 025672 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG-I-PAIGLEGDVRKREDAVRVVESTI 84 (249)
Q Consensus 7 ~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~-~-~~~~~~~Dl~~~~~~~~~~~~~~ 84 (249)
...+++|+|+|||||+|||.++|.+|+++|++++++.|+.++++.+++++.+.+ . ++++++||++|.++++++++++.
T Consensus 7 ~e~~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~ 86 (282)
T KOG1205|consen 7 MERLAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAI 86 (282)
T ss_pred HHHhCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHH
Confidence 456899999999999999999999999999999999999999999999987553 3 49999999999999999999999
Q ss_pred HHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCc
Q 025672 85 NHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW 164 (249)
Q Consensus 85 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~ 164 (249)
+.||++|++|||||......+.+.+.+++...|++|++|+..++++++|+|++++. |+||++||..|+.+.|
T Consensus 87 ~~fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~--------GhIVvisSiaG~~~~P 158 (282)
T KOG1205|consen 87 RHFGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRND--------GHIVVISSIAGKMPLP 158 (282)
T ss_pred HhcCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCC--------CeEEEEeccccccCCC
Confidence 99999999999999988667778888999999999999999999999999998863 9999999999999999
Q ss_pred cchhhHHHHHHHHHHHHHHHHHhcCCCC--eEEEEEecCccccccccC
Q 025672 165 YQIHVSAAKAAVDSITRSLALEWGTDYA--IRVNGIAPGPIKDTAGVS 210 (249)
Q Consensus 165 ~~~~y~~sK~a~~~l~~~la~e~~~~~g--i~v~~v~pG~v~t~~~~~ 210 (249)
..+.|++||+|+.+|+.+|+.|+. +.+ |++ .|+||+|+|+....
T Consensus 159 ~~~~Y~ASK~Al~~f~etLR~El~-~~~~~i~i-~V~PG~V~Te~~~~ 204 (282)
T KOG1205|consen 159 FRSIYSASKHALEGFFETLRQELI-PLGTIIII-LVSPGPIETEFTGK 204 (282)
T ss_pred cccccchHHHHHHHHHHHHHHHhh-ccCceEEE-EEecCceeecccch
Confidence 999999999999999999999998 666 666 99999999875443
|
|
| >PRK08340 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-43 Score=287.28 Aligned_cols=227 Identities=17% Similarity=0.239 Sum_probs=197.0
Q ss_pred EEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCccEE
Q 025672 14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDIL 93 (249)
Q Consensus 14 ~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~v 93 (249)
+++||||++|||++++++|+++|++|++++|+++.+++..+++...+ ++.++++|++|+++++++++++.+.++++|++
T Consensus 2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~l 80 (259)
T PRK08340 2 NVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYG-EVYAVKADLSDKDDLKNLVKEAWELLGGIDAL 80 (259)
T ss_pred eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcC-CceEEEcCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence 69999999999999999999999999999999988888888886544 68899999999999999999999999999999
Q ss_pred EEcCCCCC--CCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhhHH
Q 025672 94 VNAAAGNF--LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSA 171 (249)
Q Consensus 94 i~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~~ 171 (249)
|||||... ..++.+.+.++|.+.+++|+.+++.+++.++|.|.+... +|+||++||..+..+.++...|++
T Consensus 81 i~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~-------~g~iv~isS~~~~~~~~~~~~y~~ 153 (259)
T PRK08340 81 VWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKM-------KGVLVYLSSVSVKEPMPPLVLADV 153 (259)
T ss_pred EECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCC-------CCEEEEEeCcccCCCCCCchHHHH
Confidence 99999754 345677888999999999999999999999998864321 389999999999888888999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCC---------ChHH-HHHhhhhhhcccCCCCHHHHHHHHH
Q 025672 172 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL---------APEE-IRSKATDYMAAYKFGEKWDIAMAAL 241 (249)
Q Consensus 172 sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~---------~~~~-~~~~~~~~~~~~~~~~~~dva~~v~ 241 (249)
+|+|+.+|+|+++.|++ ++||+||+|+||+++|++..... .+++ ..+.+....|++|+++|+|||+++.
T Consensus 154 sKaa~~~~~~~la~e~~-~~gI~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~~~ 232 (259)
T PRK08340 154 TRAGLVQLAKGVSRTYG-GKGIRAYTVLLGSFDTPGARENLARIAEERGVSFEETWEREVLERTPLKRTGRWEELGSLIA 232 (259)
T ss_pred HHHHHHHHHHHHHHHhC-CCCEEEEEeccCcccCccHHHHHHhhhhccCCchHHHHHHHHhccCCccCCCCHHHHHHHHH
Confidence 99999999999999998 89999999999999987643211 1122 2344556678999999999999999
Q ss_pred HhccCCCC
Q 025672 242 YLASDAGQ 249 (249)
Q Consensus 242 ~l~s~~a~ 249 (249)
||+|++++
T Consensus 233 fL~s~~~~ 240 (259)
T PRK08340 233 FLLSENAE 240 (259)
T ss_pred HHcCcccc
Confidence 99998764
|
|
| >PRK07035 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-42 Score=282.78 Aligned_cols=233 Identities=30% Similarity=0.376 Sum_probs=207.3
Q ss_pred CCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHH
Q 025672 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (249)
Q Consensus 7 ~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 86 (249)
.+++++|+++||||++|||.+++++|+++|++|++++|+.+.++.+.+++...+.++.++++|+++.++++.+++++.+.
T Consensus 3 ~~~l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 82 (252)
T PRK07035 3 LFDLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRER 82 (252)
T ss_pred ccccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 35788999999999999999999999999999999999988888888888776777889999999999999999999999
Q ss_pred hCCccEEEEcCCCCC-CCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCcc
Q 025672 87 FGKLDILVNAAAGNF-LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY 165 (249)
Q Consensus 87 ~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~ 165 (249)
++++|++|||+|... ..++.+.+.+++++.+++|+.+++.++++++|++.++.. ++|+++||..+..+.++
T Consensus 83 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--------~~iv~~sS~~~~~~~~~ 154 (252)
T PRK07035 83 HGRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGG--------GSIVNVASVNGVSPGDF 154 (252)
T ss_pred cCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCC--------cEEEEECchhhcCCCCC
Confidence 999999999999754 456778889999999999999999999999999977543 88999999999888889
Q ss_pred chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhcc
Q 025672 166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245 (249)
Q Consensus 166 ~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s 245 (249)
...|++||+++++|++++++|+. ++||+|++|+||+++|++.......+...+......|..|+.+|+|+++++.||++
T Consensus 155 ~~~Y~~sK~al~~~~~~l~~e~~-~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~ 233 (252)
T PRK07035 155 QGIYSITKAAVISMTKAFAKECA-PFGIRVNALLPGLTDTKFASALFKNDAILKQALAHIPLRRHAEPSEMAGAVLYLAS 233 (252)
T ss_pred CcchHHHHHHHHHHHHHHHHHHh-hcCEEEEEEeeccccCcccccccCCHHHHHHHHccCCCCCcCCHHHHHHHHHHHhC
Confidence 99999999999999999999998 88999999999999987654433333444555666788999999999999999999
Q ss_pred CCC
Q 025672 246 DAG 248 (249)
Q Consensus 246 ~~a 248 (249)
+.+
T Consensus 234 ~~~ 236 (252)
T PRK07035 234 DAS 236 (252)
T ss_pred ccc
Confidence 864
|
|
| >PRK12747 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-42 Score=283.31 Aligned_cols=228 Identities=32% Similarity=0.377 Sum_probs=194.5
Q ss_pred CCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEe-CCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHH--
Q 025672 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMG-RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH-- 86 (249)
Q Consensus 10 l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~-r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-- 86 (249)
+++|+++||||++|||++++++|++.|++|++++ ++.+..++...++...+.++..+++|+++.++++.+++++.+.
T Consensus 2 ~~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (252)
T PRK12747 2 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQ 81 (252)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhh
Confidence 5689999999999999999999999999999875 5667777777777766677889999999999999999888753
Q ss_pred --hC--CccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc
Q 025672 87 --FG--KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 162 (249)
Q Consensus 87 --~~--~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~ 162 (249)
++ ++|++|||||.....++.+.+.++|++++++|+.+++.++++++|.|.+. |+||++||..+..+
T Consensus 82 ~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~----------g~iv~isS~~~~~~ 151 (252)
T PRK12747 82 NRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDN----------SRIINISSAATRIS 151 (252)
T ss_pred hhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcC----------CeEEEECCcccccC
Confidence 34 89999999998766677888999999999999999999999999999653 78999999999998
Q ss_pred CccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHH
Q 025672 163 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALY 242 (249)
Q Consensus 163 ~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~ 242 (249)
.++...|++||+|+.+++++++.|++ ++||+||+|+||+|+|++.......+...+......|.+|+.+|+|+++++.|
T Consensus 152 ~~~~~~Y~~sKaa~~~~~~~la~e~~-~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~ 230 (252)
T PRK12747 152 LPDFIAYSMTKGAINTMTFTLAKQLG-ARGITVNAILPGFIKTDMNAELLSDPMMKQYATTISAFNRLGEVEDIADTAAF 230 (252)
T ss_pred CCCchhHHHHHHHHHHHHHHHHHHHh-HcCCEEEEEecCCccCchhhhcccCHHHHHHHHhcCcccCCCCHHHHHHHHHH
Confidence 88899999999999999999999998 89999999999999987643322222222222233467899999999999999
Q ss_pred hccCCC
Q 025672 243 LASDAG 248 (249)
Q Consensus 243 l~s~~a 248 (249)
|+++.+
T Consensus 231 l~s~~~ 236 (252)
T PRK12747 231 LASPDS 236 (252)
T ss_pred HcCccc
Confidence 999864
|
|
| >PRK08277 D-mannonate oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-42 Score=286.76 Aligned_cols=232 Identities=32% Similarity=0.420 Sum_probs=203.9
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
+++++|+++||||++|||++++++|+++|++|++++|+.+.++.+.+++...+.++.++++|++|+++++.+++++.+.+
T Consensus 6 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 85 (278)
T PRK08277 6 FSLKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDF 85 (278)
T ss_pred eccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 35789999999999999999999999999999999999888888888887767788999999999999999999999999
Q ss_pred CCccEEEEcCCCCCC---------------CCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEE
Q 025672 88 GKLDILVNAAAGNFL---------------VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIII 152 (249)
Q Consensus 88 ~~id~vi~~ag~~~~---------------~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv 152 (249)
+++|++|||||.... .++.+.+.++|++.+++|+.+++.++++++|.|.+++. |+||
T Consensus 86 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~--------g~ii 157 (278)
T PRK08277 86 GPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKG--------GNII 157 (278)
T ss_pred CCCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCC--------cEEE
Confidence 999999999996532 24567888999999999999999999999999987643 8899
Q ss_pred EeccccccccCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCC-----hHHHHHhhhhhhcc
Q 025672 153 NISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA-----PEEIRSKATDYMAA 227 (249)
Q Consensus 153 ~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~-----~~~~~~~~~~~~~~ 227 (249)
++||..+..+.++...|+++|+|+.+|+++++.|++ ++||+||+|+||+++|++...... ..+..+.+....|+
T Consensus 158 ~isS~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~-~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~p~ 236 (278)
T PRK08277 158 NISSMNAFTPLTKVPAYSAAKAAISNFTQWLAVHFA-KVGIRVNAIAPGFFLTEQNRALLFNEDGSLTERANKILAHTPM 236 (278)
T ss_pred EEccchhcCCCCCCchhHHHHHHHHHHHHHHHHHhC-ccCeEEEEEEeccCcCcchhhhhccccccchhHHHHHhccCCc
Confidence 999999999988999999999999999999999998 889999999999999885432211 12233445566789
Q ss_pred cCCCCHHHHHHHHHHhccC-CC
Q 025672 228 YKFGEKWDIAMAALYLASD-AG 248 (249)
Q Consensus 228 ~~~~~~~dva~~v~~l~s~-~a 248 (249)
+|+++|+|+|++++||+|+ ++
T Consensus 237 ~r~~~~~dva~~~~~l~s~~~~ 258 (278)
T PRK08277 237 GRFGKPEELLGTLLWLADEKAS 258 (278)
T ss_pred cCCCCHHHHHHHHHHHcCcccc
Confidence 9999999999999999998 55
|
|
| >PRK07791 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-42 Score=287.88 Aligned_cols=230 Identities=24% Similarity=0.327 Sum_probs=196.2
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCc---------chHHHHHHHHHhcCCCeeEEEccCCCHHHHHHH
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK---------TVLRSAVAALHSLGIPAIGLEGDVRKREDAVRV 79 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~---------~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~ 79 (249)
.+++|+++||||++|||++++++|+++|++|++++++. +.++++.+++...+.++.++.+|++|+++++++
T Consensus 3 ~l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~ 82 (286)
T PRK07791 3 LLDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANL 82 (286)
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHH
Confidence 46899999999999999999999999999999999876 667788888877677889999999999999999
Q ss_pred HHHHHHHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccc
Q 025672 80 VESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH 159 (249)
Q Consensus 80 ~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~ 159 (249)
++++.+.++++|++|||||+....++.+.+.++|++.+++|+.+++.++++++|.|.++.... ....|+||++||..+
T Consensus 83 ~~~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~--~~~~g~Iv~isS~~~ 160 (286)
T PRK07791 83 VDAAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAG--RAVDARIINTSSGAG 160 (286)
T ss_pred HHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccC--CCCCcEEEEeCchhh
Confidence 999999999999999999987777888899999999999999999999999999997542110 112378999999999
Q ss_pred cccCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhccc--CCCCHHHHH
Q 025672 160 YTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAY--KFGEKWDIA 237 (249)
Q Consensus 160 ~~~~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~dva 237 (249)
..+.++...|++||+|+.+|+++++.|++ ++||+||+|+|| +.|++... .........+.+ +..+|||++
T Consensus 161 ~~~~~~~~~Y~asKaal~~l~~~la~el~-~~gIrVn~v~Pg-~~T~~~~~------~~~~~~~~~~~~~~~~~~pedva 232 (286)
T PRK07791 161 LQGSVGQGNYSAAKAGIAALTLVAAAELG-RYGVTVNAIAPA-ARTRMTET------VFAEMMAKPEEGEFDAMAPENVS 232 (286)
T ss_pred CcCCCCchhhHHHHHHHHHHHHHHHHHHH-HhCeEEEEECCC-CCCCcchh------hHHHHHhcCcccccCCCCHHHHH
Confidence 99999999999999999999999999998 889999999999 77664311 111122223333 467999999
Q ss_pred HHHHHhccCCC
Q 025672 238 MAALYLASDAG 248 (249)
Q Consensus 238 ~~v~~l~s~~a 248 (249)
++++||+++++
T Consensus 233 ~~~~~L~s~~~ 243 (286)
T PRK07791 233 PLVVWLGSAES 243 (286)
T ss_pred HHHHHHhCchh
Confidence 99999999865
|
|
| >PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-43 Score=287.67 Aligned_cols=218 Identities=33% Similarity=0.472 Sum_probs=196.7
Q ss_pred cCC--CchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHh-cCCCeeEEEccCCCHHHHHHHHHHHHHHh-CCccEEE
Q 025672 19 GGG--SGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHS-LGIPAIGLEGDVRKREDAVRVVESTINHF-GKLDILV 94 (249)
Q Consensus 19 Ga~--~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~~id~vi 94 (249)
|++ +|||+++|++|+++|++|++++|+.+++++..+++.. .+.+ ++.+|++++++++++++++.+.+ |++|++|
T Consensus 1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~~~--~~~~D~~~~~~v~~~~~~~~~~~~g~iD~lV 78 (241)
T PF13561_consen 1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYGAE--VIQCDLSDEESVEALFDEAVERFGGRIDILV 78 (241)
T ss_dssp STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTTSE--EEESCTTSHHHHHHHHHHHHHHHCSSESEEE
T ss_pred CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcCCc--eEeecCcchHHHHHHHHHHHhhcCCCeEEEE
Confidence 566 9999999999999999999999999987666666653 3433 69999999999999999999999 9999999
Q ss_pred EcCCCCCC----CCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhhH
Q 025672 95 NAAAGNFL----VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVS 170 (249)
Q Consensus 95 ~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~ 170 (249)
||+|.... .++.+.+.++|++.+++|+.+++.+++++.|+|.+. |+||++||..+..+.++...|+
T Consensus 79 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------gsii~iss~~~~~~~~~~~~y~ 148 (241)
T PF13561_consen 79 NNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKG----------GSIINISSIAAQRPMPGYSAYS 148 (241)
T ss_dssp EEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHE----------EEEEEEEEGGGTSBSTTTHHHH
T ss_pred ecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC----------CCcccccchhhcccCccchhhH
Confidence 99998765 677888999999999999999999999999988775 8899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCC-CCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhccCCCC
Q 025672 171 AAKAAVDSITRSLALEWGTD-YAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGQ 249 (249)
Q Consensus 171 ~sK~a~~~l~~~la~e~~~~-~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~a~ 249 (249)
++|+|+++|+|++|.||+ + +|||||+|+||+++|++.......+++.+......|++|+++|+|||++++||+||+++
T Consensus 149 ~sKaal~~l~r~lA~el~-~~~gIrVN~V~pG~i~t~~~~~~~~~~~~~~~~~~~~pl~r~~~~~evA~~v~fL~s~~a~ 227 (241)
T PF13561_consen 149 ASKAALEGLTRSLAKELA-PKKGIRVNAVSPGPIETPMTERIPGNEEFLEELKKRIPLGRLGTPEEVANAVLFLASDAAS 227 (241)
T ss_dssp HHHHHHHHHHHHHHHHHG-GHGTEEEEEEEESSBSSHHHHHHHTHHHHHHHHHHHSTTSSHBEHHHHHHHHHHHHSGGGT
T ss_pred HHHHHHHHHHHHHHHHhc-cccCeeeeeecccceeccchhccccccchhhhhhhhhccCCCcCHHHHHHHHHHHhCcccc
Confidence 999999999999999999 8 99999999999999876544444677888889999999999999999999999999864
|
... |
| >PRK09242 tropinone reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-42 Score=281.65 Aligned_cols=234 Identities=29% Similarity=0.386 Sum_probs=209.6
Q ss_pred CCCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhc--CCCeeEEEccCCCHHHHHHHHHHH
Q 025672 6 KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVEST 83 (249)
Q Consensus 6 ~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~ 83 (249)
..+.+++|+++||||++|||++++++|+++|++|++++|+.+.++++.+++... +.++.++++|++++++++.+++++
T Consensus 3 ~~~~~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 82 (257)
T PRK09242 3 HRWRLDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWV 82 (257)
T ss_pred cccccCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHH
Confidence 345678999999999999999999999999999999999998888888887654 567899999999999999999999
Q ss_pred HHHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC
Q 025672 84 INHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT 163 (249)
Q Consensus 84 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~ 163 (249)
.+.++++|+||||+|.....++.+.+.++|++.+++|+.+++.++++++|+|.++.. ++||++||..+..+.
T Consensus 83 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--------~~ii~~sS~~~~~~~ 154 (257)
T PRK09242 83 EDHWDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHAS--------SAIVNIGSVSGLTHV 154 (257)
T ss_pred HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCC--------ceEEEECccccCCCC
Confidence 999999999999999876667778899999999999999999999999999987643 789999999999888
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHh
Q 025672 164 WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYL 243 (249)
Q Consensus 164 ~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l 243 (249)
++...|+++|+++.+++++++.|+. ++||++|+|+||+++|++.......++..+......|.+++.+|+|++.++.||
T Consensus 155 ~~~~~Y~~sK~a~~~~~~~la~e~~-~~~i~v~~i~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l 233 (257)
T PRK09242 155 RSGAPYGMTKAALLQMTRNLAVEWA-EDGIRVNAVAPWYIRTPLTSGPLSDPDYYEQVIERTPMRRVGEPEEVAAAVAFL 233 (257)
T ss_pred CCCcchHHHHHHHHHHHHHHHHHHH-HhCeEEEEEEECCCCCcccccccCChHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence 8899999999999999999999998 889999999999999887655444455555566778889999999999999999
Q ss_pred ccCCC
Q 025672 244 ASDAG 248 (249)
Q Consensus 244 ~s~~a 248 (249)
+++.+
T Consensus 234 ~~~~~ 238 (257)
T PRK09242 234 CMPAA 238 (257)
T ss_pred hCccc
Confidence 98754
|
|
| >TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-42 Score=279.59 Aligned_cols=230 Identities=33% Similarity=0.468 Sum_probs=199.2
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhC
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 88 (249)
++++|+++||||++|||.+++++|+++|++|++++|+. .++..+.+...+.++.++++|++++++++.+++++.+.++
T Consensus 2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 79 (248)
T TIGR01832 2 SLEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSE--PSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFG 79 (248)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCch--HHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 47899999999999999999999999999999999875 3455555655566789999999999999999999999999
Q ss_pred CccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchh
Q 025672 89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH 168 (249)
Q Consensus 89 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~ 168 (249)
++|++|||+|.....++.+.+.++|++.+++|+.+++.+++++++.|.++.. .|+||++||..+..+.+....
T Consensus 80 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~-------~g~iv~~sS~~~~~~~~~~~~ 152 (248)
T TIGR01832 80 HIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGR-------GGKIINIASMLSFQGGIRVPS 152 (248)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCC-------CeEEEEEecHHhccCCCCCch
Confidence 9999999999877777778889999999999999999999999999976531 278999999988888888899
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhccCCC
Q 025672 169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAG 248 (249)
Q Consensus 169 y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~a 248 (249)
|+++|+++.+++++++.|+. ++||+||+|+||+++|++.......+...+.+....|.+++.+|+|+|+++.||+++.+
T Consensus 153 Y~~sKaa~~~~~~~la~e~~-~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~ 231 (248)
T TIGR01832 153 YTASKHGVAGLTKLLANEWA-AKGINVNAIAPGYMATNNTQALRADEDRNAAILERIPAGRWGTPDDIGGPAVFLASSAS 231 (248)
T ss_pred hHHHHHHHHHHHHHHHHHhC-ccCcEEEEEEECcCcCcchhccccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccc
Confidence 99999999999999999998 88999999999999987654322222333344556788999999999999999999754
|
This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation. |
| >PRK07677 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-42 Score=280.16 Aligned_cols=230 Identities=41% Similarity=0.613 Sum_probs=201.4
Q ss_pred CcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCcc
Q 025672 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD 91 (249)
Q Consensus 12 ~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 91 (249)
+|+++||||++|||++++++|+++|++|++++|+.++++++.+++...+.++.++++|++|+++++++++++.+.++++|
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 80 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRID 80 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCcc
Confidence 58999999999999999999999999999999998888888888876667899999999999999999999999999999
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhhHH
Q 025672 92 ILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSA 171 (249)
Q Consensus 92 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~~ 171 (249)
++|||+|.....++.+.+.++|++++++|+.+++++++++++.|.+... .|+||++||..+..+.+....|++
T Consensus 81 ~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-------~g~ii~isS~~~~~~~~~~~~Y~~ 153 (252)
T PRK07677 81 ALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGI-------KGNIINMVATYAWDAGPGVIHSAA 153 (252)
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCC-------CEEEEEEcChhhccCCCCCcchHH
Confidence 9999999766667788899999999999999999999999999875432 388999999999888888889999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCC-CChHHHHHhhhhhhcccCCCCHHHHHHHHHHhccCCC
Q 025672 172 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK-LAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAG 248 (249)
Q Consensus 172 sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~a 248 (249)
+|+|+++|+++|+.|+.+++||+||+|+||+++|+.+... ...++..+.+.+..+.+++.+|+|+++++.||+++.+
T Consensus 154 sKaa~~~~~~~la~e~~~~~gi~v~~v~PG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~ 231 (252)
T PRK07677 154 AKAGVLAMTRTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWESEEAAKRTIQSVPLGRLGTPEEIAGLAYFLLSDEA 231 (252)
T ss_pred HHHHHHHHHHHHHHHhCcccCeEEEEEeecccccccccccccCCHHHHHHHhccCCCCCCCCHHHHHHHHHHHcCccc
Confidence 9999999999999999734799999999999996543222 2234445556667788999999999999999999864
|
|
| >KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-42 Score=277.16 Aligned_cols=197 Identities=23% Similarity=0.299 Sum_probs=185.9
Q ss_pred CCCCCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHH
Q 025672 4 PFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVEST 83 (249)
Q Consensus 4 ~~~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 83 (249)
|.+..+++|++||||||++|+|+++|.+|+++|+++++.|.|.+..++..+++++.| +++.+.||++|++++.+..+++
T Consensus 30 ~~~~k~v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g-~~~~y~cdis~~eei~~~a~~V 108 (300)
T KOG1201|consen 30 PKPLKSVSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIG-EAKAYTCDISDREEIYRLAKKV 108 (300)
T ss_pred ccchhhccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcC-ceeEEEecCCCHHHHHHHHHHH
Confidence 346677999999999999999999999999999999999999999999999998765 8999999999999999999999
Q ss_pred HHHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC
Q 025672 84 INHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT 163 (249)
Q Consensus 84 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~ 163 (249)
++++|.||++|||||+.+..++.+.+.+++++++++|+.|++..+|+|+|.|.+++. |+||.|+|.+|..+.
T Consensus 109 k~e~G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~--------GHIV~IaS~aG~~g~ 180 (300)
T KOG1201|consen 109 KKEVGDVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNN--------GHIVTIASVAGLFGP 180 (300)
T ss_pred HHhcCCceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCC--------ceEEEehhhhcccCC
Confidence 999999999999999999999999999999999999999999999999999998764 999999999999999
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHhc--CCCCeEEEEEecCcccccccc
Q 025672 164 WYQIHVSAAKAAVDSITRSLALEWG--TDYAIRVNGIAPGPIKDTAGV 209 (249)
Q Consensus 164 ~~~~~y~~sK~a~~~l~~~la~e~~--~~~gi~v~~v~pG~v~t~~~~ 209 (249)
++..+|++||+|+.+|.++|..|+. +..||+...|+|++++|++..
T Consensus 181 ~gl~~YcaSK~a~vGfhesL~~EL~~~~~~~IktTlv~P~~i~Tgmf~ 228 (300)
T KOG1201|consen 181 AGLADYCASKFAAVGFHESLSMELRALGKDGIKTTLVCPYFINTGMFD 228 (300)
T ss_pred ccchhhhhhHHHHHHHHHHHHHHHHhcCCCCeeEEEEeeeeccccccC
Confidence 9999999999999999999999976 467899999999999976654
|
|
| >PRK06172 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-42 Score=279.97 Aligned_cols=232 Identities=26% Similarity=0.348 Sum_probs=207.2
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
+.+++|+++||||++|||.+++++|+++|++|++++|+.+++++..+++...+.++.++.+|++|.++++++++++.+.+
T Consensus 3 ~~l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~ 82 (253)
T PRK06172 3 MTFSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAY 82 (253)
T ss_pred cCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHh
Confidence 45789999999999999999999999999999999999988888888887777789999999999999999999999999
Q ss_pred CCccEEEEcCCCCCC-CCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccc
Q 025672 88 GKLDILVNAAAGNFL-VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ 166 (249)
Q Consensus 88 ~~id~vi~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~ 166 (249)
+++|++|||+|.... .++.+.+.+++++.+++|+.+++.++++++|.+.++.. ++||++||..+..+.++.
T Consensus 83 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~--------~~ii~~sS~~~~~~~~~~ 154 (253)
T PRK06172 83 GRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGG--------GAIVNTASVAGLGAAPKM 154 (253)
T ss_pred CCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC--------cEEEEECchhhccCCCCC
Confidence 999999999998654 45778889999999999999999999999999976643 789999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCC-hHHHHHhhhhhhcccCCCCHHHHHHHHHHhcc
Q 025672 167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA-PEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245 (249)
Q Consensus 167 ~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s 245 (249)
..|+++|+++++|+++++.|+. ++||+|++|+||+++|++...... .+...+.+....|..|+.+|+|+++.++||++
T Consensus 155 ~~Y~~sKaa~~~~~~~la~e~~-~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ia~~~~~l~~ 233 (253)
T PRK06172 155 SIYAASKHAVIGLTKSAAIEYA-KKGIRVNAVCPAVIDTDMFRRAYEADPRKAEFAAAMHPVGRIGKVEEVASAVLYLCS 233 (253)
T ss_pred chhHHHHHHHHHHHHHHHHHhc-ccCeEEEEEEeCCccChhhhhhcccChHHHHHHhccCCCCCccCHHHHHHHHHHHhC
Confidence 9999999999999999999998 889999999999999886544322 34455556677888999999999999999999
Q ss_pred CCC
Q 025672 246 DAG 248 (249)
Q Consensus 246 ~~a 248 (249)
+.+
T Consensus 234 ~~~ 236 (253)
T PRK06172 234 DGA 236 (253)
T ss_pred ccc
Confidence 864
|
|
| >PRK07831 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-41 Score=280.09 Aligned_cols=232 Identities=29% Similarity=0.442 Sum_probs=204.7
Q ss_pred CCCCCcEEEEecCCC-chhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHh-cC-CCeeEEEccCCCHHHHHHHHHHHH
Q 025672 8 DILKGKVALLTGGGS-GIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHS-LG-IPAIGLEGDVRKREDAVRVVESTI 84 (249)
Q Consensus 8 ~~l~~k~~lItGa~~-giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~-~~-~~~~~~~~Dl~~~~~~~~~~~~~~ 84 (249)
..+++|+++||||+| |||+++++.|+++|++|++++|+.++++...+++.. .+ .++.++++|++++++++++++++.
T Consensus 13 ~~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 92 (262)
T PRK07831 13 GLLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAV 92 (262)
T ss_pred cccCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHH
Confidence 357799999999985 999999999999999999999998888888777764 33 468899999999999999999999
Q ss_pred HHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCc
Q 025672 85 NHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW 164 (249)
Q Consensus 85 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~ 164 (249)
+.++++|++|||+|.....++.+.+.++|++.+++|+.+++.++++++|.|.+... .|+||+++|..+..+.+
T Consensus 93 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-------~g~iv~~ss~~~~~~~~ 165 (262)
T PRK07831 93 ERLGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGH-------GGVIVNNASVLGWRAQH 165 (262)
T ss_pred HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC-------CcEEEEeCchhhcCCCC
Confidence 99999999999999876777888899999999999999999999999999976531 38899999999888888
Q ss_pred cchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhc
Q 025672 165 YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLA 244 (249)
Q Consensus 165 ~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~ 244 (249)
+...|+++|+|+++++++++.|++ ++||+||+|+||+++|++.... .+++..+.+....|++|+.+|+|+++++.||+
T Consensus 166 ~~~~Y~~sKaal~~~~~~la~e~~-~~gI~v~~i~Pg~~~t~~~~~~-~~~~~~~~~~~~~~~~r~~~p~~va~~~~~l~ 243 (262)
T PRK07831 166 GQAHYAAAKAGVMALTRCSALEAA-EYGVRINAVAPSIAMHPFLAKV-TSAELLDELAAREAFGRAAEPWEVANVIAFLA 243 (262)
T ss_pred CCcchHHHHHHHHHHHHHHHHHhC-ccCeEEEEEeeCCccCcccccc-cCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHc
Confidence 899999999999999999999998 8999999999999998765433 23445555666778999999999999999999
Q ss_pred cCCC
Q 025672 245 SDAG 248 (249)
Q Consensus 245 s~~a 248 (249)
++.+
T Consensus 244 s~~~ 247 (262)
T PRK07831 244 SDYS 247 (262)
T ss_pred Cchh
Confidence 9875
|
|
| >PRK06128 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-42 Score=286.48 Aligned_cols=229 Identities=28% Similarity=0.395 Sum_probs=200.2
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcc--hHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHH
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT--VLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~--~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 86 (249)
.+++|++|||||++|||++++++|+++|++|++++++.+ ..+++.+.+...+.++.++.||++|.++++++++++.+.
T Consensus 52 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 131 (300)
T PRK06128 52 RLQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKE 131 (300)
T ss_pred ccCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHH
Confidence 478999999999999999999999999999999887643 355666777666778899999999999999999999999
Q ss_pred hCCccEEEEcCCCCC-CCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCcc
Q 025672 87 FGKLDILVNAAAGNF-LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY 165 (249)
Q Consensus 87 ~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~ 165 (249)
++++|+||||||... ..++.+.+.++|++.+++|+.++++++++++|.|.+ +++||++||..++.+.++
T Consensus 132 ~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~----------~~~iv~~sS~~~~~~~~~ 201 (300)
T PRK06128 132 LGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPP----------GASIINTGSIQSYQPSPT 201 (300)
T ss_pred hCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCc----------CCEEEEECCccccCCCCC
Confidence 999999999999764 456788899999999999999999999999999864 278999999999988888
Q ss_pred chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhcc
Q 025672 166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245 (249)
Q Consensus 166 ~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s 245 (249)
...|++||+|+++|+++++.|+. ++||+||+|+||+++|++.......++..+.+....|++|+++|+|++.++.||++
T Consensus 202 ~~~Y~asK~a~~~~~~~la~el~-~~gI~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~~~~l~s 280 (300)
T PRK06128 202 LLDYASTKAAIVAFTKALAKQVA-EKGIRVNAVAPGPVWTPLQPSGGQPPEKIPDFGSETPMKRPGQPVEMAPLYVLLAS 280 (300)
T ss_pred chhHHHHHHHHHHHHHHHHHHhh-hcCcEEEEEEECcCcCCCcccCCCCHHHHHHHhcCCCCCCCcCHHHHHHHHHHHhC
Confidence 99999999999999999999998 88999999999999987643322233444556667889999999999999999999
Q ss_pred CCC
Q 025672 246 DAG 248 (249)
Q Consensus 246 ~~a 248 (249)
+++
T Consensus 281 ~~~ 283 (300)
T PRK06128 281 QES 283 (300)
T ss_pred ccc
Confidence 865
|
|
| >PRK08265 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-42 Score=281.27 Aligned_cols=226 Identities=27% Similarity=0.333 Sum_probs=194.0
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhC
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 88 (249)
++++|+++||||++|||++++++|+++|++|++++|+.++++++.+++ +.++.++++|++|+++++++++++.+.++
T Consensus 3 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 79 (261)
T PRK08265 3 GLAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASL---GERARFIATDITDDAAIERAVATVVARFG 79 (261)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCeeEEEEecCCCHHHHHHHHHHHHHHhC
Confidence 467999999999999999999999999999999999988777776665 45788999999999999999999999999
Q ss_pred CccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchh
Q 025672 89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH 168 (249)
Q Consensus 89 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~ 168 (249)
++|++|||||......+ +.+.++|++.+++|+.+++.++++++|.|. +. +|+||++||..+..+.++...
T Consensus 80 ~id~lv~~ag~~~~~~~-~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~--------~g~ii~isS~~~~~~~~~~~~ 149 (261)
T PRK08265 80 RVDILVNLACTYLDDGL-ASSRADWLAALDVNLVSAAMLAQAAHPHLA-RG--------GGAIVNFTSISAKFAQTGRWL 149 (261)
T ss_pred CCCEEEECCCCCCCCcC-cCCHHHHHHHHhHhhHHHHHHHHHHHHHHh-cC--------CcEEEEECchhhccCCCCCch
Confidence 99999999997654433 568899999999999999999999999997 33 388999999999999888999
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCC-hHHHHHhh-hhhhcccCCCCHHHHHHHHHHhccC
Q 025672 169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA-PEEIRSKA-TDYMAAYKFGEKWDIAMAALYLASD 246 (249)
Q Consensus 169 y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~dva~~v~~l~s~ 246 (249)
|+++|+++.+++++++.|++ ++||+||+|+||+++|++...... .....+.+ ....|++|+++|+|+|+++.||+++
T Consensus 150 Y~asKaa~~~~~~~la~e~~-~~gi~vn~v~PG~~~t~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~~~~l~s~ 228 (261)
T PRK08265 150 YPASKAAIRQLTRSMAMDLA-PDGIRVNSVSPGWTWSRVMDELSGGDRAKADRVAAPFHLLGRVGDPEEVAQVVAFLCSD 228 (261)
T ss_pred hHHHHHHHHHHHHHHHHHhc-ccCEEEEEEccCCccChhhhhhcccchhHHHHhhcccCCCCCccCHHHHHHHHHHHcCc
Confidence 99999999999999999998 899999999999999875432111 11111122 2346889999999999999999998
Q ss_pred CC
Q 025672 247 AG 248 (249)
Q Consensus 247 ~a 248 (249)
.+
T Consensus 229 ~~ 230 (261)
T PRK08265 229 AA 230 (261)
T ss_pred cc
Confidence 65
|
|
| >PRK07097 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-41 Score=280.69 Aligned_cols=235 Identities=32% Similarity=0.430 Sum_probs=208.0
Q ss_pred CCCCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHH
Q 025672 5 FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTI 84 (249)
Q Consensus 5 ~~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 84 (249)
++.+++++|+++|||+++|||++++++|+++|++|++++|+.+++++..+++...+.++.++++|++|+++++++++++.
T Consensus 3 ~~~~~~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 82 (265)
T PRK07097 3 ENLFSLKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIE 82 (265)
T ss_pred ccccCCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHH
Confidence 67788999999999999999999999999999999999999988888888887767789999999999999999999999
Q ss_pred HHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCc
Q 025672 85 NHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW 164 (249)
Q Consensus 85 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~ 164 (249)
+.++++|++|||+|.....++.+.+.+++++++++|+.+++.+++.++|.|.++.. ++||++||..+..+.+
T Consensus 83 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--------g~iv~isS~~~~~~~~ 154 (265)
T PRK07097 83 KEVGVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGH--------GKIINICSMMSELGRE 154 (265)
T ss_pred HhCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCC--------cEEEEEcCccccCCCC
Confidence 99999999999999887778888999999999999999999999999999987543 8899999998888888
Q ss_pred cchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCC------hHHHHHhhhhhhcccCCCCHHHHHH
Q 025672 165 YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA------PEEIRSKATDYMAAYKFGEKWDIAM 238 (249)
Q Consensus 165 ~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~dva~ 238 (249)
+...|+++|+++.++++++++|+. ++||+||+|+||++.|+....... ...+.+.+....|.+++.+|+|+++
T Consensus 155 ~~~~Y~~sKaal~~l~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~ 233 (265)
T PRK07097 155 TVSAYAAAKGGLKMLTKNIASEYG-EANIQCNGIGPGYIATPQTAPLRELQADGSRHPFDQFIIAKTPAARWGDPEDLAG 233 (265)
T ss_pred CCccHHHHHHHHHHHHHHHHHHhh-hcCceEEEEEeccccccchhhhhhccccccchhHHHHHHhcCCccCCcCHHHHHH
Confidence 899999999999999999999998 889999999999999875432211 1223333445667889999999999
Q ss_pred HHHHhccCCC
Q 025672 239 AALYLASDAG 248 (249)
Q Consensus 239 ~v~~l~s~~a 248 (249)
++.||+++.+
T Consensus 234 ~~~~l~~~~~ 243 (265)
T PRK07097 234 PAVFLASDAS 243 (265)
T ss_pred HHHHHhCccc
Confidence 9999998753
|
|
| >PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-41 Score=277.82 Aligned_cols=232 Identities=31% Similarity=0.472 Sum_probs=205.4
Q ss_pred CCCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHH
Q 025672 6 KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN 85 (249)
Q Consensus 6 ~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 85 (249)
+++.+++|+++||||++|||++++++|+++|++|++++|+.+..+.+.+++...+.++.++++|++|+++++++++.+.+
T Consensus 5 ~~~~l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~ 84 (255)
T PRK06113 5 DNLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALS 84 (255)
T ss_pred cccCcCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 45668899999999999999999999999999999999998888888888876677889999999999999999999999
Q ss_pred HhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCcc
Q 025672 86 HFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY 165 (249)
Q Consensus 86 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~ 165 (249)
.++++|++|||+|.....++ +.+.++|+..+++|+.++++++++++|+|.+.. .++||++||..+..+.++
T Consensus 85 ~~~~~d~li~~ag~~~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--------~~~iv~isS~~~~~~~~~ 155 (255)
T PRK06113 85 KLGKVDILVNNAGGGGPKPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNG--------GGVILTITSMAAENKNIN 155 (255)
T ss_pred HcCCCCEEEECCCCCCCCCC-CCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcC--------CcEEEEEecccccCCCCC
Confidence 99999999999998655554 578899999999999999999999999997654 278999999999988888
Q ss_pred chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhcc
Q 025672 166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245 (249)
Q Consensus 166 ~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s 245 (249)
...|+++|+|+++|+++++.|+. ++||+||+|+||+++|++...... ++..+......|+.++++|+|+++++.||++
T Consensus 156 ~~~Y~~sK~a~~~~~~~la~~~~-~~~i~v~~v~pg~~~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~ 233 (255)
T PRK06113 156 MTSYASSKAAASHLVRNMAFDLG-EKNIRVNGIAPGAILTDALKSVIT-PEIEQKMLQHTPIRRLGQPQDIANAALFLCS 233 (255)
T ss_pred cchhHHHHHHHHHHHHHHHHHhh-hhCeEEEEEecccccccccccccC-HHHHHHHHhcCCCCCCcCHHHHHHHHHHHcC
Confidence 99999999999999999999998 889999999999999876544333 3344455666788899999999999999999
Q ss_pred CCC
Q 025672 246 DAG 248 (249)
Q Consensus 246 ~~a 248 (249)
+.+
T Consensus 234 ~~~ 236 (255)
T PRK06113 234 PAA 236 (255)
T ss_pred ccc
Confidence 864
|
|
| >PRK06398 aldose dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-42 Score=281.31 Aligned_cols=219 Identities=26% Similarity=0.414 Sum_probs=191.6
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhC
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 88 (249)
++++|++|||||++|||++++++|+++|++|++++|+.... .++.+++||++|+++++++++++.+.++
T Consensus 3 ~l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~-----------~~~~~~~~D~~~~~~i~~~~~~~~~~~~ 71 (258)
T PRK06398 3 GLKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSY-----------NDVDYFKVDVSNKEQVIKGIDYVISKYG 71 (258)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCcccc-----------CceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 57899999999999999999999999999999999986531 2578999999999999999999999999
Q ss_pred CccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchh
Q 025672 89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH 168 (249)
Q Consensus 89 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~ 168 (249)
++|++|||||.....++.+.+.++|++.+++|+.+++.++++++|.|.+++. |+||++||..+..+.++...
T Consensus 72 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--------g~iv~isS~~~~~~~~~~~~ 143 (258)
T PRK06398 72 RIDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDK--------GVIINIASVQSFAVTRNAAA 143 (258)
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCC--------eEEEEeCcchhccCCCCCch
Confidence 9999999999877778888999999999999999999999999999987543 89999999999988889999
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCC------CChHHH---HHhhhhhhcccCCCCHHHHHHH
Q 025672 169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK------LAPEEI---RSKATDYMAAYKFGEKWDIAMA 239 (249)
Q Consensus 169 y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~------~~~~~~---~~~~~~~~~~~~~~~~~dva~~ 239 (249)
|+++|+|+++|+++++.|+. ++ |+||+|+||+++|++.... ..++.. .+.+....|++|+.+|+|++++
T Consensus 144 Y~~sKaal~~~~~~la~e~~-~~-i~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~eva~~ 221 (258)
T PRK06398 144 YVTSKHAVLGLTRSIAVDYA-PT-IRCVAVCPGSIRTPLLEWAAELEVGKDPEHVERKIREWGEMHPMKRVGKPEEVAYV 221 (258)
T ss_pred hhhhHHHHHHHHHHHHHHhC-CC-CEEEEEecCCccchHHhhhhhccccCChhhhHHHHHhhhhcCCcCCCcCHHHHHHH
Confidence 99999999999999999997 65 9999999999998764321 111111 2233455788999999999999
Q ss_pred HHHhccCCC
Q 025672 240 ALYLASDAG 248 (249)
Q Consensus 240 v~~l~s~~a 248 (249)
++||+++.+
T Consensus 222 ~~~l~s~~~ 230 (258)
T PRK06398 222 VAFLASDLA 230 (258)
T ss_pred HHHHcCccc
Confidence 999999865
|
|
| >PRK08936 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-41 Score=278.45 Aligned_cols=232 Identities=30% Similarity=0.485 Sum_probs=203.5
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCc-chHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK-TVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
++++|+++||||++|||++++++|+++|++|++++|+. +..+.+.+++...+.++.++.+|++|+++++++++.+.+.+
T Consensus 4 ~~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~ 83 (261)
T PRK08936 4 DLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKEF 83 (261)
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 47899999999999999999999999999999988854 45666777776667788899999999999999999999999
Q ss_pred CCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch
Q 025672 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 167 (249)
Q Consensus 88 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~ 167 (249)
+++|++|||+|.....++.+.+.++|++.+++|+.+++.+++.++++|.+... .|+||++||..+..+.++..
T Consensus 84 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~-------~g~iv~~sS~~~~~~~~~~~ 156 (261)
T PRK08936 84 GTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDI-------KGNIINMSSVHEQIPWPLFV 156 (261)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC-------CcEEEEEccccccCCCCCCc
Confidence 99999999999877777888899999999999999999999999999987532 38899999999888888899
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhccCC
Q 025672 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247 (249)
Q Consensus 168 ~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~ 247 (249)
.|+++|+|+.+++++++.|+. ++||+||+|+||+++|++.......++.........|.+++.+|+|+++++.||+++.
T Consensus 157 ~Y~~sKaa~~~~~~~la~e~~-~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~ 235 (261)
T PRK08936 157 HYAASKGGVKLMTETLAMEYA-PKGIRVNNIGPGAINTPINAEKFADPKQRADVESMIPMGYIGKPEEIAAVAAWLASSE 235 (261)
T ss_pred ccHHHHHHHHHHHHHHHHHHh-hcCeEEEEEEECcCCCCccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCcc
Confidence 999999999999999999998 8899999999999998764433333334444556778899999999999999999986
Q ss_pred C
Q 025672 248 G 248 (249)
Q Consensus 248 a 248 (249)
+
T Consensus 236 ~ 236 (261)
T PRK08936 236 A 236 (261)
T ss_pred c
Confidence 5
|
|
| >PRK08643 acetoin reductase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-41 Score=277.97 Aligned_cols=229 Identities=28% Similarity=0.359 Sum_probs=202.6
Q ss_pred CcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCcc
Q 025672 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD 91 (249)
Q Consensus 12 ~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 91 (249)
+|+++||||++|||++++++|+++|++|++++|+.+.++++..++...+.++.++++|++|+++++++++++.+.++++|
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 81 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDLN 81 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 68999999999999999999999999999999999888888888877677889999999999999999999999999999
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhhHH
Q 025672 92 ILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSA 171 (249)
Q Consensus 92 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~~ 171 (249)
++|||+|.....++.+.+.++|++.+++|+.+++.+++.+++.|.+... +++||++||..+..+.++...|++
T Consensus 82 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~-------~~~iv~~sS~~~~~~~~~~~~Y~~ 154 (256)
T PRK08643 82 VVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGH-------GGKIINATSQAGVVGNPELAVYSS 154 (256)
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC-------CCEEEEECccccccCCCCCchhHH
Confidence 9999999877777888899999999999999999999999999976432 378999999999888888999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCC---------ChHHHHHhhhhhhcccCCCCHHHHHHHHHH
Q 025672 172 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL---------APEEIRSKATDYMAAYKFGEKWDIAMAALY 242 (249)
Q Consensus 172 sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~dva~~v~~ 242 (249)
+|++++.+++.++.|+. ++||+||+|+||+++|++..... .++...+.+....+.+|+.+|+|+++++.|
T Consensus 155 sK~a~~~~~~~la~e~~-~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~ 233 (256)
T PRK08643 155 TKFAVRGLTQTAARDLA-SEGITVNAYAPGIVKTPMMFDIAHQVGENAGKPDEWGMEQFAKDITLGRLSEPEDVANCVSF 233 (256)
T ss_pred HHHHHHHHHHHHHHHhc-ccCcEEEEEeeCCCcChhhhHHHhhhccccCCCchHHHHHHhccCCCCCCcCHHHHHHHHHH
Confidence 99999999999999998 88999999999999987643211 111123345566788999999999999999
Q ss_pred hccCCC
Q 025672 243 LASDAG 248 (249)
Q Consensus 243 l~s~~a 248 (249)
|+++.+
T Consensus 234 L~~~~~ 239 (256)
T PRK08643 234 LAGPDS 239 (256)
T ss_pred HhCccc
Confidence 999875
|
|
| >PRK05872 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-42 Score=284.99 Aligned_cols=232 Identities=21% Similarity=0.234 Sum_probs=202.8
Q ss_pred CCCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHH
Q 025672 6 KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN 85 (249)
Q Consensus 6 ~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 85 (249)
+..++++|++|||||++|||++++++|+++|++|++++|+.++++++.+++.. +.++..+.||++|+++++.+++++.+
T Consensus 3 ~~~~l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~ 81 (296)
T PRK05872 3 PMTSLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGG-DDRVLTVVADVTDLAAMQAAAEEAVE 81 (296)
T ss_pred CCCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcC-CCcEEEEEecCCCHHHHHHHHHHHHH
Confidence 44568899999999999999999999999999999999999988888887753 45677888999999999999999999
Q ss_pred HhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCcc
Q 025672 86 HFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY 165 (249)
Q Consensus 86 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~ 165 (249)
.++++|++|||||.....++.+.+.++|++.+++|+.+++++++.++|.|.++ +|+||++||..+..+.++
T Consensus 82 ~~g~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~---------~g~iv~isS~~~~~~~~~ 152 (296)
T PRK05872 82 RFGGIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIER---------RGYVLQVSSLAAFAAAPG 152 (296)
T ss_pred HcCCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc---------CCEEEEEeCHhhcCCCCC
Confidence 99999999999999877888899999999999999999999999999999764 288999999999999999
Q ss_pred chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhh--hcccCCCCHHHHHHHHHHh
Q 025672 166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDY--MAAYKFGEKWDIAMAALYL 243 (249)
Q Consensus 166 ~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~dva~~v~~l 243 (249)
...|++||+++++|+++++.|++ ++||+|++|+||+++|++...........+.+... .|..+..+|+|+++++.++
T Consensus 153 ~~~Y~asKaal~~~~~~l~~e~~-~~gi~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~i~~~ 231 (296)
T PRK05872 153 MAAYCASKAGVEAFANALRLEVA-HHGVTVGSAYLSWIDTDLVRDADADLPAFRELRARLPWPLRRTTSVEKCAAAFVDG 231 (296)
T ss_pred chHHHHHHHHHHHHHHHHHHHHH-HHCcEEEEEecCcccchhhhhccccchhHHHHHhhCCCcccCCCCHHHHHHHHHHH
Confidence 99999999999999999999998 88999999999999987654433221222223333 3567889999999999999
Q ss_pred ccCCC
Q 025672 244 ASDAG 248 (249)
Q Consensus 244 ~s~~a 248 (249)
+++..
T Consensus 232 ~~~~~ 236 (296)
T PRK05872 232 IERRA 236 (296)
T ss_pred HhcCC
Confidence 98754
|
|
| >PRK06124 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-41 Score=277.00 Aligned_cols=235 Identities=31% Similarity=0.405 Sum_probs=211.5
Q ss_pred CCCCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHH
Q 025672 5 FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTI 84 (249)
Q Consensus 5 ~~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 84 (249)
+.++.+++|+++||||+++||++++++|+++|++|++++|+.+.++.+.+++...+.++.++.||++|++++.++++++.
T Consensus 4 ~~~~~~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 83 (256)
T PRK06124 4 LQRFSLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARID 83 (256)
T ss_pred ccccCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHH
Confidence 45677899999999999999999999999999999999999888888888887767789999999999999999999999
Q ss_pred HHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCc
Q 025672 85 NHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW 164 (249)
Q Consensus 85 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~ 164 (249)
+.++++|++|||+|.....++.+.+.++|++.+++|+.+++.+++.+++.|.+.+. ++||++||..+..+.+
T Consensus 84 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~--------~~iv~~ss~~~~~~~~ 155 (256)
T PRK06124 84 AEHGRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGY--------GRIIAITSIAGQVARA 155 (256)
T ss_pred HhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC--------cEEEEEeechhccCCC
Confidence 99999999999999877778888899999999999999999999999999977653 8899999999988888
Q ss_pred cchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhc
Q 025672 165 YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLA 244 (249)
Q Consensus 165 ~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~ 244 (249)
+...|+++|+++.++++.++.|++ ++||++++|+||+++|+.......+++..+.+....+.+++.+|+|+++++.||+
T Consensus 156 ~~~~Y~~sK~a~~~~~~~la~e~~-~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~ 234 (256)
T PRK06124 156 GDAVYPAAKQGLTGLMRALAAEFG-PHGITSNAIAPGYFATETNAAMAADPAVGPWLAQRTPLGRWGRPEEIAGAAVFLA 234 (256)
T ss_pred CccHhHHHHHHHHHHHHHHHHHHH-HhCcEEEEEEECCccCcchhhhccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHc
Confidence 999999999999999999999998 8899999999999998764433334455555666778899999999999999999
Q ss_pred cCCC
Q 025672 245 SDAG 248 (249)
Q Consensus 245 s~~a 248 (249)
++++
T Consensus 235 ~~~~ 238 (256)
T PRK06124 235 SPAA 238 (256)
T ss_pred Cccc
Confidence 9875
|
|
| >PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-41 Score=276.67 Aligned_cols=226 Identities=27% Similarity=0.312 Sum_probs=198.1
Q ss_pred CCCCcEEEEecCC--CchhHHHHHHHHHcCCeEEEEeCC-----------cchHHHHHHHHHhcCCCeeEEEccCCCHHH
Q 025672 9 ILKGKVALLTGGG--SGIGFEISLQLGKHGAAIAIMGRR-----------KTVLRSAVAALHSLGIPAIGLEGDVRKRED 75 (249)
Q Consensus 9 ~l~~k~~lItGa~--~giG~~~a~~l~~~G~~v~l~~r~-----------~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~ 75 (249)
.+++|+++||||+ +|||+++|++|+++|++|++++|+ .++.++..+++...+.++.++++|++|+++
T Consensus 3 ~l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~ 82 (256)
T PRK12859 3 QLKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQNDA 82 (256)
T ss_pred CcCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCHHH
Confidence 5889999999999 499999999999999999987642 223445566666667789999999999999
Q ss_pred HHHHHHHHHHHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEec
Q 025672 76 AVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINIS 155 (249)
Q Consensus 76 ~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~is 155 (249)
++++++++.+.++++|++|||||.....++.+.+.++|++.+++|+.+++.+.++++|.|.++. +|+||++|
T Consensus 83 i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--------~g~iv~is 154 (256)
T PRK12859 83 PKELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKS--------GGRIINMT 154 (256)
T ss_pred HHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC--------CeEEEEEc
Confidence 9999999999999999999999987777888999999999999999999999999999997654 38999999
Q ss_pred cccccccCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHH
Q 025672 156 ATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWD 235 (249)
Q Consensus 156 s~~~~~~~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 235 (249)
|..+..+.+++..|+++|+++.+|+++++.|+. ++||+||+|+||+++|+.+. +...+.+....|+.++.+|+|
T Consensus 155 S~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~-~~~i~v~~v~PG~i~t~~~~-----~~~~~~~~~~~~~~~~~~~~d 228 (256)
T PRK12859 155 SGQFQGPMVGELAYAATKGAIDALTSSLAAEVA-HLGITVNAINPGPTDTGWMT-----EEIKQGLLPMFPFGRIGEPKD 228 (256)
T ss_pred ccccCCCCCCchHHHHHHHHHHHHHHHHHHHhh-hhCeEEEEEEEccccCCCCC-----HHHHHHHHhcCCCCCCcCHHH
Confidence 999998888999999999999999999999998 88999999999999986432 233444556678889999999
Q ss_pred HHHHHHHhccCCC
Q 025672 236 IAMAALYLASDAG 248 (249)
Q Consensus 236 va~~v~~l~s~~a 248 (249)
+++++.||+++.+
T Consensus 229 ~a~~~~~l~s~~~ 241 (256)
T PRK12859 229 AARLIKFLASEEA 241 (256)
T ss_pred HHHHHHHHhCccc
Confidence 9999999999865
|
|
| >PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-42 Score=280.39 Aligned_cols=226 Identities=29% Similarity=0.340 Sum_probs=193.8
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
+.+++|+++||||++|||++++++|+++|++|++++|+.++++++.+++ +.++.++++|++|+++++++++++.+.+
T Consensus 2 ~~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 78 (263)
T PRK06200 2 GWLHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRF---GDHVLVVEGDVTSYADNQRAVDQTVDAF 78 (263)
T ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCcceEEEccCCCHHHHHHHHHHHHHhc
Confidence 3478999999999999999999999999999999999988777766655 3468899999999999999999999999
Q ss_pred CCccEEEEcCCCCC-CCCCCCCCHHH----HHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc
Q 025672 88 GKLDILVNAAAGNF-LVPAEDLSPNG----FRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 162 (249)
Q Consensus 88 ~~id~vi~~ag~~~-~~~~~~~~~~~----~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~ 162 (249)
+++|++|||||+.. ..++.+.+.++ |++++++|+.+++.++++++|.|.+. +|+||+++|..+..+
T Consensus 79 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~---------~g~iv~~sS~~~~~~ 149 (263)
T PRK06200 79 GKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKAS---------GGSMIFTLSNSSFYP 149 (263)
T ss_pred CCCCEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhc---------CCEEEEECChhhcCC
Confidence 99999999999764 34555666655 88999999999999999999998754 288999999999988
Q ss_pred CccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCC---------ChHHHHHhhhhhhcccCCCCH
Q 025672 163 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL---------APEEIRSKATDYMAAYKFGEK 233 (249)
Q Consensus 163 ~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~ 233 (249)
.++...|++||+|+.+|+++++.|++ + +|+||+|+||+++|++..... ..++..+.+....|++|+.+|
T Consensus 150 ~~~~~~Y~~sK~a~~~~~~~la~el~-~-~Irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~ 227 (263)
T PRK06200 150 GGGGPLYTASKHAVVGLVRQLAYELA-P-KIRVNGVAPGGTVTDLRGPASLGQGETSISDSPGLADMIAAITPLQFAPQP 227 (263)
T ss_pred CCCCchhHHHHHHHHHHHHHHHHHHh-c-CcEEEEEeCCccccCCcCccccCCCCcccccccchhHHhhcCCCCCCCCCH
Confidence 88889999999999999999999998 6 499999999999987543210 112233445667899999999
Q ss_pred HHHHHHHHHhccCC
Q 025672 234 WDIAMAALYLASDA 247 (249)
Q Consensus 234 ~dva~~v~~l~s~~ 247 (249)
+|+++++.||+++.
T Consensus 228 ~eva~~~~fl~s~~ 241 (263)
T PRK06200 228 EDHTGPYVLLASRR 241 (263)
T ss_pred HHHhhhhhheeccc
Confidence 99999999999986
|
|
| >PRK06125 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-41 Score=276.48 Aligned_cols=228 Identities=24% Similarity=0.281 Sum_probs=199.0
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhc-CCCeeEEEccCCCHHHHHHHHHHHHHH
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL-GIPAIGLEGDVRKREDAVRVVESTINH 86 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 86 (249)
+++++|+++|||+++|||++++++|+++|++|++++|+.+++++..+++... +.++.++++|++|+++++.++++
T Consensus 3 ~~~~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~---- 78 (259)
T PRK06125 3 LHLAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAE---- 78 (259)
T ss_pred cCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHH----
Confidence 4578999999999999999999999999999999999998888888877643 56788999999999999988764
Q ss_pred hCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccc
Q 025672 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ 166 (249)
Q Consensus 87 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~ 166 (249)
++++|++|||+|.....++.+.+.++|+.++++|+.++++++++++|.|.+++. |+||++||..+..+.+++
T Consensus 79 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~--------g~iv~iss~~~~~~~~~~ 150 (259)
T PRK06125 79 AGDIDILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGS--------GVIVNVIGAAGENPDADY 150 (259)
T ss_pred hCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCC--------cEEEEecCccccCCCCCc
Confidence 489999999999877778889999999999999999999999999999987643 789999999888888888
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCC--------CChHHHHHhhhhhhcccCCCCHHHHHH
Q 025672 167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK--------LAPEEIRSKATDYMAAYKFGEKWDIAM 238 (249)
Q Consensus 167 ~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~dva~ 238 (249)
..|+++|+|+++|+++++.|+. ++||+||+|+||+++|+..... ..+++..+.+....|.+++.+|+|+++
T Consensus 151 ~~y~ask~al~~~~~~la~e~~-~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~ 229 (259)
T PRK06125 151 ICGSAGNAALMAFTRALGGKSL-DDGVRVVGVNPGPVATDRMLTLLKGRARAELGDESRWQELLAGLPLGRPATPEEVAD 229 (259)
T ss_pred hHhHHHHHHHHHHHHHHHHHhC-ccCeEEEEEecCccccHHHHHHHHhhhhcccCCHHHHHHHhccCCcCCCcCHHHHHH
Confidence 8999999999999999999998 8999999999999998753321 122333445556678899999999999
Q ss_pred HHHHhccCCC
Q 025672 239 AALYLASDAG 248 (249)
Q Consensus 239 ~v~~l~s~~a 248 (249)
+++||+++++
T Consensus 230 ~~~~l~~~~~ 239 (259)
T PRK06125 230 LVAFLASPRS 239 (259)
T ss_pred HHHHHcCchh
Confidence 9999999865
|
|
| >PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-41 Score=275.53 Aligned_cols=229 Identities=27% Similarity=0.438 Sum_probs=194.5
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
..+++|+++||||++|||++++++|+++|++|++++|+. ..+++.+++...+.++.++.+|++|+++++++++++.+.+
T Consensus 4 ~~~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 82 (260)
T PRK12823 4 QRFAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSE-LVHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAF 82 (260)
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCch-HHHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHc
Confidence 447899999999999999999999999999999999985 3556667776667778899999999999999999999999
Q ss_pred CCccEEEEcCCCCC-CCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccc
Q 025672 88 GKLDILVNAAAGNF-LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ 166 (249)
Q Consensus 88 ~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~ 166 (249)
+++|++|||||... ..++.+.+.++|++.+++|+.+++.+++.++|.|.+++. |+||++||..+.. ++.
T Consensus 83 ~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~--------g~iv~~sS~~~~~--~~~ 152 (260)
T PRK12823 83 GRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGG--------GAIVNVSSIATRG--INR 152 (260)
T ss_pred CCCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC--------CeEEEEcCccccC--CCC
Confidence 99999999999653 467788899999999999999999999999999987643 7899999987642 345
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccC--------C---CChHHHHHhhhhhhcccCCCCHHH
Q 025672 167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVS--------K---LAPEEIRSKATDYMAAYKFGEKWD 235 (249)
Q Consensus 167 ~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~--------~---~~~~~~~~~~~~~~~~~~~~~~~d 235 (249)
..|+++|+|+.+|+++++.|++ ++||+||+|+||+++|++... . ...+++.+......|++|+++|+|
T Consensus 153 ~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 231 (260)
T PRK12823 153 VPYSAAKGGVNALTASLAFEYA-EHGIRVNAVAPGGTEAPPRRVPRNAAPQSEQEKAWYQQIVDQTLDSSLMKRYGTIDE 231 (260)
T ss_pred CccHHHHHHHHHHHHHHHHHhc-ccCcEEEEEecCccCCcchhhHHhhccccccccccHHHHHHHHhccCCcccCCCHHH
Confidence 6899999999999999999998 889999999999999874210 0 011233344455678899999999
Q ss_pred HHHHHHHhccCCC
Q 025672 236 IAMAALYLASDAG 248 (249)
Q Consensus 236 va~~v~~l~s~~a 248 (249)
++++++||+++++
T Consensus 232 va~~~~~l~s~~~ 244 (260)
T PRK12823 232 QVAAILFLASDEA 244 (260)
T ss_pred HHHHHHHHcCccc
Confidence 9999999999864
|
|
| >PRK07856 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-41 Score=274.91 Aligned_cols=224 Identities=29% Similarity=0.415 Sum_probs=195.8
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
+++++|+++||||++|||++++++|+++|++|++++|+.+. ...+.++.++++|++++++++++++.+.+.+
T Consensus 2 ~~~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~--------~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 73 (252)
T PRK07856 2 LDLTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE--------TVDGRPAEFHAADVRDPDQVAALVDAIVERH 73 (252)
T ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh--------hhcCCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence 45789999999999999999999999999999999998754 1234578899999999999999999999999
Q ss_pred CCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch
Q 025672 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 167 (249)
Q Consensus 88 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~ 167 (249)
+++|+||||||.....++.+.+.++|++.+++|+.+++.+++++.+.|.++.. +|+||++||..+..+.++..
T Consensus 74 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-------~g~ii~isS~~~~~~~~~~~ 146 (252)
T PRK07856 74 GRLDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPG-------GGSIVNIGSVSGRRPSPGTA 146 (252)
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC-------CcEEEEEcccccCCCCCCCc
Confidence 99999999999877777778899999999999999999999999999976422 38899999999999988999
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhccCC
Q 025672 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247 (249)
Q Consensus 168 ~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~ 247 (249)
.|+++|+++++|++.++.|++ ++ |++|+|+||+++|++.......++..+.+....|.+|+.+|+|++++++||++++
T Consensus 147 ~Y~~sK~a~~~l~~~la~e~~-~~-i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~va~~~~~L~~~~ 224 (252)
T PRK07856 147 AYGAAKAGLLNLTRSLAVEWA-PK-VRVNAVVVGLVRTEQSELHYGDAEGIAAVAATVPLGRLATPADIAWACLFLASDL 224 (252)
T ss_pred hhHHHHHHHHHHHHHHHHHhc-CC-eEEEEEEeccccChHHhhhccCHHHHHHHhhcCCCCCCcCHHHHHHHHHHHcCcc
Confidence 999999999999999999998 76 9999999999998765433333333444566678899999999999999999986
Q ss_pred C
Q 025672 248 G 248 (249)
Q Consensus 248 a 248 (249)
+
T Consensus 225 ~ 225 (252)
T PRK07856 225 A 225 (252)
T ss_pred c
Confidence 5
|
|
| >PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-41 Score=275.05 Aligned_cols=227 Identities=31% Similarity=0.429 Sum_probs=192.4
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
+++++|+++||||++|||++++++|+++|++|++++++.+.. .+++... ++.++.+|++|+++++++++++.+.+
T Consensus 3 ~~l~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~---~~~l~~~--~~~~~~~Dl~~~~~~~~~~~~~~~~~ 77 (255)
T PRK06463 3 MRFKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENE---AKELREK--GVFTIKCDVGNRDQVKKSKEVVEKEF 77 (255)
T ss_pred CCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHH---HHHHHhC--CCeEEEecCCCHHHHHHHHHHHHHHc
Confidence 457899999999999999999999999999999887765422 2233222 47889999999999999999999999
Q ss_pred CCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc-cCccc
Q 025672 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT-ATWYQ 166 (249)
Q Consensus 88 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~-~~~~~ 166 (249)
+++|++|||+|.....++.+.+.++|++.+++|+.+++.+++.++|.|.+++ +|+||++||..+.. +.++.
T Consensus 78 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~--------~g~iv~isS~~~~~~~~~~~ 149 (255)
T PRK06463 78 GRVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSK--------NGAIVNIASNAGIGTAAEGT 149 (255)
T ss_pred CCCCEEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC--------CcEEEEEcCHHhCCCCCCCc
Confidence 9999999999987667788889999999999999999999999999998654 38899999988775 34567
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCCh---HHHHHhhhhhhcccCCCCHHHHHHHHHHh
Q 025672 167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP---EEIRSKATDYMAAYKFGEKWDIAMAALYL 243 (249)
Q Consensus 167 ~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~dva~~v~~l 243 (249)
..|++||+|+.+|+++++.|++ ++||+||+|+||+++|++......+ +...+.+....|++++.+|+|++++++||
T Consensus 150 ~~Y~asKaa~~~~~~~la~e~~-~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l 228 (255)
T PRK06463 150 TFYAITKAGIIILTRRLAFELG-KYGIRVNAVAPGWVETDMTLSGKSQEEAEKLRELFRNKTVLKTTGKPEDIANIVLFL 228 (255)
T ss_pred cHhHHHHHHHHHHHHHHHHHhh-hcCeEEEEEeeCCCCCchhhcccCccchHHHHHHHHhCCCcCCCcCHHHHHHHHHHH
Confidence 8899999999999999999998 8899999999999998765432222 23344556677889999999999999999
Q ss_pred ccCCC
Q 025672 244 ASDAG 248 (249)
Q Consensus 244 ~s~~a 248 (249)
+++.+
T Consensus 229 ~s~~~ 233 (255)
T PRK06463 229 ASDDA 233 (255)
T ss_pred cChhh
Confidence 98764
|
|
| >PRK07067 sorbitol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-40 Score=273.34 Aligned_cols=229 Identities=31% Similarity=0.411 Sum_probs=200.4
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhC
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 88 (249)
.+++|+++|||+++|||++++++|+++|++|++++|+.+..+++.+++ +.++.++++|++|+++++.+++++.+.++
T Consensus 3 ~l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 79 (257)
T PRK07067 3 RLQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEI---GPAAIAVSLDVTRQDSIDRIVAAAVERFG 79 (257)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHh---CCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 477999999999999999999999999999999999988877776655 34688999999999999999999999999
Q ss_pred CccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchh
Q 025672 89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH 168 (249)
Q Consensus 89 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~ 168 (249)
++|++|||+|.....++.+.+.++++..+++|+.+++.+++++++.|.++.. +++||++||..+..+.++...
T Consensus 80 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-------~~~iv~~sS~~~~~~~~~~~~ 152 (257)
T PRK07067 80 GIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGR-------GGKIINMASQAGRRGEALVSH 152 (257)
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCC-------CcEEEEeCCHHhCCCCCCCch
Confidence 9999999999877777888899999999999999999999999999976532 378999999988888889999
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCC---------CChHHHHHhhhhhhcccCCCCHHHHHHH
Q 025672 169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK---------LAPEEIRSKATDYMAAYKFGEKWDIAMA 239 (249)
Q Consensus 169 y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~dva~~ 239 (249)
|++||+++.+++++++.|+. ++||++|+|.||+++|++.... ..+.+..+.+.+..|++++.+|+|+|++
T Consensus 153 Y~~sK~a~~~~~~~la~e~~-~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~ 231 (257)
T PRK07067 153 YCATKAAVISYTQSAALALI-RHGINVNAIAPGVVDTPMWDQVDALFARYENRPPGEKKRLVGEAVPLGRMGVPDDLTGM 231 (257)
T ss_pred hhhhHHHHHHHHHHHHHHhc-ccCeEEEEEeeCcccchhhhhhhhhhhhccCCCHHHHHHHHhhcCCCCCccCHHHHHHH
Confidence 99999999999999999998 8899999999999998753211 1122333445567789999999999999
Q ss_pred HHHhccCCC
Q 025672 240 ALYLASDAG 248 (249)
Q Consensus 240 v~~l~s~~a 248 (249)
+.||+++.+
T Consensus 232 ~~~l~s~~~ 240 (257)
T PRK07067 232 ALFLASADA 240 (257)
T ss_pred HHHHhCccc
Confidence 999999864
|
|
| >PRK06300 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-41 Score=282.72 Aligned_cols=230 Identities=26% Similarity=0.294 Sum_probs=180.8
Q ss_pred CCCCCCcEEEEecCC--CchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHH----------hcCC-----CeeEEEcc
Q 025672 7 GDILKGKVALLTGGG--SGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALH----------SLGI-----PAIGLEGD 69 (249)
Q Consensus 7 ~~~l~~k~~lItGa~--~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~----------~~~~-----~~~~~~~D 69 (249)
..+++||+++|||++ +|||+++|+.|+++|++|++.++.+ .+........ ..+. ++..+.+|
T Consensus 3 ~~~~~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d 81 (299)
T PRK06300 3 KIDLTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWVP-IYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDAS 81 (299)
T ss_pred CcCCCCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEeccc-hhhhhhhhcccccccccccccccchhhhhhHHHhhhh
Confidence 456789999999996 9999999999999999999987541 1111111100 0011 11112333
Q ss_pred CCCH------------------HHHHHHHHHHHHHhCCccEEEEcCCCCC--CCCCCCCCHHHHHHHHhhhhHHHHHHHH
Q 025672 70 VRKR------------------EDAVRVVESTINHFGKLDILVNAAAGNF--LVPAEDLSPNGFRTVIEIDSVGTFIMCH 129 (249)
Q Consensus 70 l~~~------------------~~~~~~~~~~~~~~~~id~vi~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~ 129 (249)
+++. ++++++++++.+++|++|++|||||... ..++.+.+.++|++.+++|+.+++++++
T Consensus 82 ~~~~~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~ 161 (299)
T PRK06300 82 FDTPEDVPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLS 161 (299)
T ss_pred cCCCEEeecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHHH
Confidence 3333 4689999999999999999999998653 4688899999999999999999999999
Q ss_pred HHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch-hhHHHHHHHHHHHHHHHHHhcCC-CCeEEEEEecCcccccc
Q 025672 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI-HVSAAKAAVDSITRSLALEWGTD-YAIRVNGIAPGPIKDTA 207 (249)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~-~y~~sK~a~~~l~~~la~e~~~~-~gi~v~~v~pG~v~t~~ 207 (249)
+++|.|.++ |+||+++|..+..+.++.. .|++||+|+.+|+++|+.|++ + +|||||+|+||+++|++
T Consensus 162 a~~p~m~~~----------G~ii~iss~~~~~~~p~~~~~Y~asKaAl~~lt~~la~el~-~~~gIrVn~V~PG~v~T~~ 230 (299)
T PRK06300 162 HFGPIMNPG----------GSTISLTYLASMRAVPGYGGGMSSAKAALESDTKVLAWEAG-RRWGIRVNTISAGPLASRA 230 (299)
T ss_pred HHHHHhhcC----------CeEEEEeehhhcCcCCCccHHHHHHHHHHHHHHHHHHHHhC-CCCCeEEEEEEeCCccChh
Confidence 999999653 7899999998888877764 899999999999999999998 6 59999999999999876
Q ss_pred ccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhccCCC
Q 025672 208 GVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAG 248 (249)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~a 248 (249)
......+++..+......|++|..+|+|++.++.||+|+++
T Consensus 231 ~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~v~~L~s~~~ 271 (299)
T PRK06300 231 GKAIGFIERMVDYYQDWAPLPEPMEAEQVGAAAAFLVSPLA 271 (299)
T ss_pred hhcccccHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccc
Confidence 43221123333444556788999999999999999999865
|
|
| >KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-43 Score=259.14 Aligned_cols=227 Identities=27% Similarity=0.364 Sum_probs=208.8
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
.++.|+.+++||+.-|||++++..|++.|++|+.+.|+++.++.+.++.. ..+..+..|+++++.+.+++...
T Consensus 3 t~laG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~p---~~I~Pi~~Dls~wea~~~~l~~v---- 75 (245)
T KOG1207|consen 3 TSLAGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKETP---SLIIPIVGDLSAWEALFKLLVPV---- 75 (245)
T ss_pred ccccceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhCC---cceeeeEecccHHHHHHHhhccc----
Confidence 45789999999999999999999999999999999999999998887764 34788999999988877776544
Q ss_pred CCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch
Q 025672 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 167 (249)
Q Consensus 88 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~ 167 (249)
+++|.+|||||+.-..++.+.+.++++.+|++|+.+.+++.|.....+..+.. .|.||++||.++..+..+..
T Consensus 76 ~pidgLVNNAgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~-------~GaIVNvSSqas~R~~~nHt 148 (245)
T KOG1207|consen 76 FPIDGLVNNAGVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQI-------KGAIVNVSSQASIRPLDNHT 148 (245)
T ss_pred CchhhhhccchhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccC-------CceEEEecchhcccccCCce
Confidence 78999999999999999999999999999999999999999997776655443 37899999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhccCC
Q 025672 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247 (249)
Q Consensus 168 ~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~ 247 (249)
.|+++|+|+++++|+|+.|++ +++||||+|.|..|.|.|....++++.-.+.+.+.+|++|+...+|+..++.||+||.
T Consensus 149 vYcatKaALDmlTk~lAlELG-p~kIRVNsVNPTVVmT~MG~dnWSDP~K~k~mL~riPl~rFaEV~eVVnA~lfLLSd~ 227 (245)
T KOG1207|consen 149 VYCATKAALDMLTKCLALELG-PQKIRVNSVNPTVVMTDMGRDNWSDPDKKKKMLDRIPLKRFAEVDEVVNAVLFLLSDN 227 (245)
T ss_pred EEeecHHHHHHHHHHHHHhhC-cceeEeeccCCeEEEecccccccCCchhccchhhhCchhhhhHHHHHHhhheeeeecC
Confidence 999999999999999999998 9999999999999999999999999888899999999999999999999999999998
Q ss_pred CC
Q 025672 248 GQ 249 (249)
Q Consensus 248 a~ 249 (249)
++
T Consensus 228 ss 229 (245)
T KOG1207|consen 228 SS 229 (245)
T ss_pred cC
Confidence 75
|
|
| >TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-41 Score=276.85 Aligned_cols=226 Identities=28% Similarity=0.390 Sum_probs=188.9
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
|++++|+++||||++|||++++++|+++|++|++++|+.+.++++.+. .+.++.++++|++|.++++++++++.+.+
T Consensus 1 m~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 77 (262)
T TIGR03325 1 MRLKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAA---HGDAVVGVEGDVRSLDDHKEAVARCVAAF 77 (262)
T ss_pred CCcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhh---cCCceEEEEeccCCHHHHHHHHHHHHHHh
Confidence 347899999999999999999999999999999999998776665443 24568899999999999999999999999
Q ss_pred CCccEEEEcCCCCCC-CCCCCCCH----HHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc
Q 025672 88 GKLDILVNAAAGNFL-VPAEDLSP----NGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 162 (249)
Q Consensus 88 ~~id~vi~~ag~~~~-~~~~~~~~----~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~ 162 (249)
+++|++|||||.... .++.+.+. ++|++.+++|+.+++.++++++|.|.+.. |+||+++|..+..+
T Consensus 78 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~---------g~iv~~sS~~~~~~ 148 (262)
T TIGR03325 78 GKIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASR---------GSVIFTISNAGFYP 148 (262)
T ss_pred CCCCEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhcC---------CCEEEEeccceecC
Confidence 999999999997532 34433333 57999999999999999999999997642 67999999988888
Q ss_pred CccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCC-C--ChH-----HHHHhhhhhhcccCCCCHH
Q 025672 163 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK-L--APE-----EIRSKATDYMAAYKFGEKW 234 (249)
Q Consensus 163 ~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~-~--~~~-----~~~~~~~~~~~~~~~~~~~ 234 (249)
.++...|+++|+|+++|+++++.|++ ++ |+||+|+||+++|++.... . ..+ ...+......|++|+++|+
T Consensus 149 ~~~~~~Y~~sKaa~~~l~~~la~e~~-~~-irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~ 226 (262)
T TIGR03325 149 NGGGPLYTAAKHAVVGLVKELAFELA-PY-VRVNGVAPGGMSSDLRGPKSLGMADKSISTVPLGDMLKSVLPIGRMPDAE 226 (262)
T ss_pred CCCCchhHHHHHHHHHHHHHHHHhhc-cC-eEEEEEecCCCcCCCccccccccccccccccchhhhhhhcCCCCCCCChH
Confidence 88888999999999999999999998 76 9999999999998764321 0 111 1223344567899999999
Q ss_pred HHHHHHHHhccCC
Q 025672 235 DIAMAALYLASDA 247 (249)
Q Consensus 235 dva~~v~~l~s~~ 247 (249)
|+++++.||+++.
T Consensus 227 eva~~~~~l~s~~ 239 (262)
T TIGR03325 227 EYTGAYVFFATRG 239 (262)
T ss_pred HhhhheeeeecCC
Confidence 9999999999973
|
Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. |
| >PRK06940 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-40 Score=275.48 Aligned_cols=217 Identities=23% Similarity=0.274 Sum_probs=183.3
Q ss_pred CcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCcc
Q 025672 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD 91 (249)
Q Consensus 12 ~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 91 (249)
+|+++|||+ +|||++++++|+ +|++|++++|+.+.++++.+++...+.++.++++|++|+++++++++++ +.++++|
T Consensus 2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~-~~~g~id 78 (275)
T PRK06940 2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATA-QTLGPVT 78 (275)
T ss_pred CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHH-HhcCCCC
Confidence 589999998 699999999996 8999999999988888888888766678899999999999999999988 5689999
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC--------
Q 025672 92 ILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT-------- 163 (249)
Q Consensus 92 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~-------- 163 (249)
++|||||... ..++|++++++|+.+++++++++.|.|.++ |++|++||..+..+.
T Consensus 79 ~li~nAG~~~-------~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~----------g~iv~isS~~~~~~~~~~~~~~~ 141 (275)
T PRK06940 79 GLVHTAGVSP-------SQASPEAILKVDLYGTALVLEEFGKVIAPG----------GAGVVIASQSGHRLPALTAEQER 141 (275)
T ss_pred EEEECCCcCC-------chhhHHHHHHHhhHHHHHHHHHHHHHHhhC----------CCEEEEEecccccCcccchhhhc
Confidence 9999999642 236789999999999999999999999653 568999998776542
Q ss_pred ----------------------ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCC--hHHHHH
Q 025672 164 ----------------------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA--PEEIRS 219 (249)
Q Consensus 164 ----------------------~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~--~~~~~~ 219 (249)
++...|++||+|+.++++++++|++ ++||+||+|+||+++|++...... .++..+
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~-~~gIrvn~i~PG~v~T~~~~~~~~~~~~~~~~ 220 (275)
T PRK06940 142 ALATTPTEELLSLPFLQPDAIEDSLHAYQIAKRANALRVMAEAVKWG-ERGARINSISPGIISTPLAQDELNGPRGDGYR 220 (275)
T ss_pred cccccccccccccccccccccCCccchhHHHHHHHHHHHHHHHHHHc-cCCeEEEEeccCcCcCccchhhhcCCchHHHH
Confidence 2467899999999999999999998 889999999999999886533221 122333
Q ss_pred hhhhhhcccCCCCHHHHHHHHHHhccCCCC
Q 025672 220 KATDYMAAYKFGEKWDIAMAALYLASDAGQ 249 (249)
Q Consensus 220 ~~~~~~~~~~~~~~~dva~~v~~l~s~~a~ 249 (249)
......|++|+++|||+|+++.||+|++++
T Consensus 221 ~~~~~~p~~r~~~peeia~~~~fL~s~~~~ 250 (275)
T PRK06940 221 NMFAKSPAGRPGTPDEIAALAEFLMGPRGS 250 (275)
T ss_pred HHhhhCCcccCCCHHHHHHHHHHHcCcccC
Confidence 445567899999999999999999998763
|
|
| >PLN02253 xanthoxin dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-40 Score=275.09 Aligned_cols=233 Identities=27% Similarity=0.343 Sum_probs=195.6
Q ss_pred CCCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHH
Q 025672 6 KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN 85 (249)
Q Consensus 6 ~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 85 (249)
+...+++|+++||||++|||++++++|+++|++|++++|+.+..+++.+++.. +.++.++++|++|+++++++++++.+
T Consensus 12 ~~~~l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~~~~ 90 (280)
T PLN02253 12 PSQRLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGG-EPNVCFFHCDVTVEDDVSRAVDFTVD 90 (280)
T ss_pred cccccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcC-CCceEEEEeecCCHHHHHHHHHHHHH
Confidence 34567899999999999999999999999999999999988777777776632 45789999999999999999999999
Q ss_pred HhCCccEEEEcCCCCCC--CCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC
Q 025672 86 HFGKLDILVNAAAGNFL--VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT 163 (249)
Q Consensus 86 ~~~~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~ 163 (249)
.++++|+||||||.... .++.+.+.++|++++++|+.+++++++++++.|.++.. |+||+++|..+..+.
T Consensus 91 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~--------g~ii~isS~~~~~~~ 162 (280)
T PLN02253 91 KFGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKK--------GSIVSLCSVASAIGG 162 (280)
T ss_pred HhCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCC--------ceEEEecChhhcccC
Confidence 99999999999997642 45778899999999999999999999999999976543 889999999988887
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChH----HHHHh----hhhhhcc-cCCCCHH
Q 025672 164 WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPE----EIRSK----ATDYMAA-YKFGEKW 234 (249)
Q Consensus 164 ~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~----~~~~~----~~~~~~~-~~~~~~~ 234 (249)
++...|+++|+++++++++++.|++ ++||+||+|+||+++|++.......+ ..... .....++ ++..+|+
T Consensus 163 ~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 241 (280)
T PLN02253 163 LGPHAYTGSKHAVLGLTRSVAAELG-KHGIRVNCVSPYAVPTALALAHLPEDERTEDALAGFRAFAGKNANLKGVELTVD 241 (280)
T ss_pred CCCcccHHHHHHHHHHHHHHHHHhh-hcCeEEEEEeeCcccccccccccccccchhhhhhhhHHHhhcCCCCcCCCCCHH
Confidence 7788999999999999999999998 88999999999999987543322211 11111 1112233 4568999
Q ss_pred HHHHHHHHhccCCC
Q 025672 235 DIAMAALYLASDAG 248 (249)
Q Consensus 235 dva~~v~~l~s~~a 248 (249)
|+++++.||+++++
T Consensus 242 dva~~~~~l~s~~~ 255 (280)
T PLN02253 242 DVANAVLFLASDEA 255 (280)
T ss_pred HHHHHHHhhcCccc
Confidence 99999999999865
|
|
| >PRK12743 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-40 Score=270.00 Aligned_cols=227 Identities=26% Similarity=0.377 Sum_probs=199.0
Q ss_pred CcEEEEecCCCchhHHHHHHHHHcCCeEEEEeC-CcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCc
Q 025672 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGR-RKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (249)
Q Consensus 12 ~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r-~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 90 (249)
+|+++||||++|||++++++|+++|++|+++++ +.+..+.+.+++...+.++.++.+|++|.++++++++++.+.++++
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 81 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGRI 81 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 689999999999999999999999999988865 5556777778887777889999999999999999999999999999
Q ss_pred cEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhhH
Q 025672 91 DILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVS 170 (249)
Q Consensus 91 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~ 170 (249)
|++|||+|.....++.+.+.++|++.+++|+.+++.+++++.+.|.+++. +|+||++||..+..+.++...|+
T Consensus 82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~-------~g~ii~isS~~~~~~~~~~~~Y~ 154 (256)
T PRK12743 82 DVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQ-------GGRIINITSVHEHTPLPGASAYT 154 (256)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC-------CeEEEEEeeccccCCCCCcchhH
Confidence 99999999877667778899999999999999999999999999976532 38899999999988988999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhccCCC
Q 025672 171 AAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAG 248 (249)
Q Consensus 171 ~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~a 248 (249)
++|+++.+++++++.++. ++||++|+|+||+++|+.... ..++.........|..|+.+|+|+++++.||+++.+
T Consensus 155 ~sK~a~~~l~~~la~~~~-~~~i~v~~v~Pg~~~t~~~~~--~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~ 229 (256)
T PRK12743 155 AAKHALGGLTKAMALELV-EHGILVNAVAPGAIATPMNGM--DDSDVKPDSRPGIPLGRPGDTHEIASLVAWLCSEGA 229 (256)
T ss_pred HHHHHHHHHHHHHHHHhh-hhCeEEEEEEeCCccCccccc--cChHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCccc
Confidence 999999999999999998 889999999999999875432 222333344556788899999999999999998764
|
|
| >PRK06139 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-40 Score=279.85 Aligned_cols=224 Identities=22% Similarity=0.289 Sum_probs=197.0
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhC
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 88 (249)
.+++|++|||||++|||++++++|+++|++|++++|+.+.++++.+++...+.++.++.+|++|+++++++++++.+.++
T Consensus 4 ~l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 83 (330)
T PRK06139 4 PLHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFGG 83 (330)
T ss_pred CCCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcC
Confidence 46789999999999999999999999999999999999999999999887788899999999999999999999999889
Q ss_pred CccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchh
Q 025672 89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH 168 (249)
Q Consensus 89 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~ 168 (249)
++|++|||||.....++.+.+.+++++.+++|+.++++++++++|.|.++.. |+||++||..+..+.+++..
T Consensus 84 ~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~--------g~iV~isS~~~~~~~p~~~~ 155 (330)
T PRK06139 84 RIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGH--------GIFINMISLGGFAAQPYAAA 155 (330)
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCC--------CEEEEEcChhhcCCCCCchh
Confidence 9999999999887788889999999999999999999999999999987653 88999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHhcCC-CCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhccC
Q 025672 169 VSAAKAAVDSITRSLALEWGTD-YAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246 (249)
Q Consensus 169 y~~sK~a~~~l~~~la~e~~~~-~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~ 246 (249)
|++||+++.+|+++|+.|+. + .||+|++|+||+++|+........ .. ....+...+.+||++|+++++++..
T Consensus 156 Y~asKaal~~~~~sL~~El~-~~~gI~V~~v~Pg~v~T~~~~~~~~~--~~---~~~~~~~~~~~pe~vA~~il~~~~~ 228 (330)
T PRK06139 156 YSASKFGLRGFSEALRGELA-DHPDIHVCDVYPAFMDTPGFRHGANY--TG---RRLTPPPPVYDPRRVAKAVVRLADR 228 (330)
T ss_pred HHHHHHHHHHHHHHHHHHhC-CCCCeEEEEEecCCccCccccccccc--cc---ccccCCCCCCCHHHHHHHHHHHHhC
Confidence 99999999999999999997 6 499999999999998754322110 00 0111223467999999999998854
|
|
| >PRK07576 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-40 Score=271.49 Aligned_cols=231 Identities=40% Similarity=0.601 Sum_probs=201.3
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
+.+++|+++||||++|||.+++++|+++|++|++++|+.++++...+++...+.++.++.+|++|+++++++++++.+.+
T Consensus 5 ~~~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~ 84 (264)
T PRK07576 5 FDFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEF 84 (264)
T ss_pred ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence 45789999999999999999999999999999999999888888777777666678899999999999999999999999
Q ss_pred CCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch
Q 025672 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 167 (249)
Q Consensus 88 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~ 167 (249)
+++|++|||+|.....++.+.+.++|+..+++|+.++++++++++|.|.++ +|+||++||..+..+.++..
T Consensus 85 ~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~---------~g~iv~iss~~~~~~~~~~~ 155 (264)
T PRK07576 85 GPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRP---------GASIIQISAPQAFVPMPMQA 155 (264)
T ss_pred CCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC---------CCEEEEECChhhccCCCCcc
Confidence 999999999997766777888999999999999999999999999998754 27899999998888888899
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccccc-ccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhccC
Q 025672 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTA-GVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246 (249)
Q Consensus 168 ~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~ 246 (249)
.|+++|+++++|+++++.|+. ++||+|++|+||+++++. +......+.....+....|++++.+|+|+++.+.||+++
T Consensus 156 ~Y~asK~a~~~l~~~la~e~~-~~gi~v~~v~pg~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~ 234 (264)
T PRK07576 156 HVCAAKAGVDMLTRTLALEWG-PEGIRVNSIVPGPIAGTEGMARLAPSPELQAAVAQSVPLKRNGTKQDIANAALFLASD 234 (264)
T ss_pred HHHHHHHHHHHHHHHHHHHhh-hcCeEEEEEecccccCcHHHhhcccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCh
Confidence 999999999999999999998 889999999999997433 322223333334444567888999999999999999987
Q ss_pred CC
Q 025672 247 AG 248 (249)
Q Consensus 247 ~a 248 (249)
.+
T Consensus 235 ~~ 236 (264)
T PRK07576 235 MA 236 (264)
T ss_pred hh
Confidence 54
|
|
| >PRK06949 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-40 Score=267.68 Aligned_cols=240 Identities=29% Similarity=0.389 Sum_probs=208.4
Q ss_pred CCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHH
Q 025672 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (249)
Q Consensus 7 ~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 86 (249)
..++++|+++||||++|||++++++|+++|++|++++|+.++++++.+++...+.++.++.+|+++.++++++++++.+.
T Consensus 4 ~~~~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 83 (258)
T PRK06949 4 SINLEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETE 83 (258)
T ss_pred ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHh
Confidence 34578999999999999999999999999999999999999888888888766667899999999999999999999999
Q ss_pred hCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccc
Q 025672 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ 166 (249)
Q Consensus 87 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~ 166 (249)
++++|++|||+|.....++.+.+.++|+.++++|+.+++.+++++++.|.++..........++||++||..+..+.+..
T Consensus 84 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~ 163 (258)
T PRK06949 84 AGTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRVLPQI 163 (258)
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccCCCCCc
Confidence 99999999999987767777888899999999999999999999999998665332222234899999999888888888
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhccC
Q 025672 167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246 (249)
Q Consensus 167 ~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~ 246 (249)
..|+++|+++..+++.++.++. ++||+|++|+||+++|+....... ++....+....|..++++|+|+++++.||+++
T Consensus 164 ~~Y~~sK~a~~~~~~~la~~~~-~~~i~v~~v~pG~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~ 241 (258)
T PRK06949 164 GLYCMSKAAVVHMTRAMALEWG-RHGINVNAICPGYIDTEINHHHWE-TEQGQKLVSMLPRKRVGKPEDLDGLLLLLAAD 241 (258)
T ss_pred cHHHHHHHHHHHHHHHHHHHHH-hcCeEEEEEeeCCCcCCcchhccC-hHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCh
Confidence 9999999999999999999998 889999999999999876443322 23334556677889999999999999999998
Q ss_pred CC
Q 025672 247 AG 248 (249)
Q Consensus 247 ~a 248 (249)
.+
T Consensus 242 ~~ 243 (258)
T PRK06949 242 ES 243 (258)
T ss_pred hh
Confidence 65
|
|
| >PRK08226 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-40 Score=269.67 Aligned_cols=230 Identities=26% Similarity=0.354 Sum_probs=197.9
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhC
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 88 (249)
.+++|+++||||++|||++++++|+++|++|++++|+.. .++..+++...+.++.++++|++++++++++++++.+.++
T Consensus 3 ~~~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~ 81 (263)
T PRK08226 3 KLTGKTALITGALQGIGEGIARVFARHGANLILLDISPE-IEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEG 81 (263)
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHH-HHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 467999999999999999999999999999999999874 4455555555566788999999999999999999999999
Q ss_pred CccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccc-cccCccch
Q 025672 89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH-YTATWYQI 167 (249)
Q Consensus 89 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~-~~~~~~~~ 167 (249)
++|+||||+|.....++.+.+.+++++.+++|+.+++.+++.+++.+.+... ++||++||..+ ..+.++..
T Consensus 82 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~--------~~iv~isS~~~~~~~~~~~~ 153 (263)
T PRK08226 82 RIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKD--------GRIVMMSSVTGDMVADPGET 153 (263)
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCC--------cEEEEECcHHhcccCCCCcc
Confidence 9999999999877777888899999999999999999999999999876543 78999999877 45667788
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCC------ChHHHHHhhhhhhcccCCCCHHHHHHHHH
Q 025672 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL------APEEIRSKATDYMAAYKFGEKWDIAMAAL 241 (249)
Q Consensus 168 ~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~dva~~v~ 241 (249)
.|+++|+++++++++++.|+. ++||+|++|+||+++|++..... ..++....+....|++++.+|+|+++.+.
T Consensus 154 ~Y~~sK~a~~~~~~~la~~~~-~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~~~ 232 (263)
T PRK08226 154 AYALTKAAIVGLTKSLAVEYA-QSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMAKAIPLRRLADPLEVGELAA 232 (263)
T ss_pred hHHHHHHHHHHHHHHHHHHhc-ccCcEEEEEecCcccCHHHHhhhhhccCCCcHHHHHHHhccCCCCCCCCHHHHHHHHH
Confidence 999999999999999999998 88999999999999987543211 12334455556678899999999999999
Q ss_pred HhccCCC
Q 025672 242 YLASDAG 248 (249)
Q Consensus 242 ~l~s~~a 248 (249)
||+++++
T Consensus 233 ~l~~~~~ 239 (263)
T PRK08226 233 FLASDES 239 (263)
T ss_pred HHcCchh
Confidence 9999864
|
|
| >PRK07814 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-39 Score=268.51 Aligned_cols=234 Identities=30% Similarity=0.406 Sum_probs=204.9
Q ss_pred CCCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHH
Q 025672 6 KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN 85 (249)
Q Consensus 6 ~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 85 (249)
....+++|++|||||++|||.+++++|+++|++|++++|+.++++++.+++...+.++.++++|++++++++++++++.+
T Consensus 4 ~~~~~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 83 (263)
T PRK07814 4 DRFRLDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVE 83 (263)
T ss_pred ccccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 44568899999999999999999999999999999999998888888888876677889999999999999999999999
Q ss_pred HhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCcc
Q 025672 86 HFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY 165 (249)
Q Consensus 86 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~ 165 (249)
.++++|+||||||.....++.+.+.++++.++++|+.+++.+++++.+.|.+... .++||++||..+..+.++
T Consensus 84 ~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-------~g~iv~~sS~~~~~~~~~ 156 (263)
T PRK07814 84 AFGRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSG-------GGSVINISSTMGRLAGRG 156 (263)
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcC-------CeEEEEEccccccCCCCC
Confidence 9999999999999876677778899999999999999999999999999976422 388999999999988889
Q ss_pred chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhcc
Q 025672 166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245 (249)
Q Consensus 166 ~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s 245 (249)
...|+++|+++.+++++++.|+. + +|++++|+||++.|+........+.+...+....+..+..+++|++++++||++
T Consensus 157 ~~~Y~~sK~a~~~~~~~~~~e~~-~-~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~ 234 (263)
T PRK07814 157 FAAYGTAKAALAHYTRLAALDLC-P-RIRVNAIAPGSILTSALEVVAANDELRAPMEKATPLRRLGDPEDIAAAAVYLAS 234 (263)
T ss_pred CchhHHHHHHHHHHHHHHHHHHC-C-CceEEEEEeCCCcCchhhhccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcC
Confidence 99999999999999999999997 6 699999999999987543222234444555566778889999999999999998
Q ss_pred CCC
Q 025672 246 DAG 248 (249)
Q Consensus 246 ~~a 248 (249)
+.+
T Consensus 235 ~~~ 237 (263)
T PRK07814 235 PAG 237 (263)
T ss_pred ccc
Confidence 753
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-40 Score=296.41 Aligned_cols=226 Identities=27% Similarity=0.393 Sum_probs=198.5
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhC
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 88 (249)
...+|++|||||++|||+++|++|+++|++|++++|+.++++++.+++ +.++.++++|++|+++++++++++.+.++
T Consensus 266 ~~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 342 (520)
T PRK06484 266 AESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEAL---GDEHLSVQADITDEAAVESAFAQIQARWG 342 (520)
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCceeEEEccCCCHHHHHHHHHHHHHHcC
Confidence 457999999999999999999999999999999999988887777655 45677899999999999999999999999
Q ss_pred CccEEEEcCCCCC-CCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch
Q 025672 89 KLDILVNAAAGNF-LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 167 (249)
Q Consensus 89 ~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~ 167 (249)
++|++|||||... ..++.+.+.++|++++++|+.++++++++++|.|.+ +|+||++||..+..+.++..
T Consensus 343 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~----------~g~iv~isS~~~~~~~~~~~ 412 (520)
T PRK06484 343 RLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQ----------GGVIVNLGSIASLLALPPRN 412 (520)
T ss_pred CCCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhcc----------CCEEEEECchhhcCCCCCCc
Confidence 9999999999864 357778899999999999999999999999999932 38899999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCC-hHHHHHhhhhhhcccCCCCHHHHHHHHHHhccC
Q 025672 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA-PEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246 (249)
Q Consensus 168 ~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~ 246 (249)
.|+++|+++++|+++++.|++ ++||+||+|+||+|+|++...... .+...+.+....|++|+.+|+|+|++++||+++
T Consensus 413 ~Y~asKaal~~l~~~la~e~~-~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~s~ 491 (520)
T PRK06484 413 AYCASKAAVTMLSRSLACEWA-PAGIRVNTVAPGYIETPAVLALKASGRADFDSIRRRIPLGRLGDPEEVAEAIAFLASP 491 (520)
T ss_pred hhHHHHHHHHHHHHHHHHHhh-hhCeEEEEEEeCCccCchhhhhccccHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCc
Confidence 999999999999999999998 899999999999999876433221 122234455677889999999999999999997
Q ss_pred CC
Q 025672 247 AG 248 (249)
Q Consensus 247 ~a 248 (249)
.+
T Consensus 492 ~~ 493 (520)
T PRK06484 492 AA 493 (520)
T ss_pred cc
Confidence 64
|
|
| >PRK07890 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-40 Score=268.73 Aligned_cols=229 Identities=28% Similarity=0.399 Sum_probs=202.5
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhC
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 88 (249)
.+++|+++||||++|||++++++|+++|++|++++|+.++++.+.+++...+.++.++.+|++|+++++++++++.+.++
T Consensus 2 ~l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 81 (258)
T PRK07890 2 LLKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFG 81 (258)
T ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcC
Confidence 46789999999999999999999999999999999999888888888876677889999999999999999999999999
Q ss_pred CccEEEEcCCCCCC-CCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch
Q 025672 89 KLDILVNAAAGNFL-VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 167 (249)
Q Consensus 89 ~id~vi~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~ 167 (249)
++|++|||||.... .++.+.+.++|+..+++|+.+++.+++++.+.|.+.. ++||++||..+..+.++..
T Consensus 82 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~---------~~ii~~sS~~~~~~~~~~~ 152 (258)
T PRK07890 82 RVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESG---------GSIVMINSMVLRHSQPKYG 152 (258)
T ss_pred CccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC---------CEEEEEechhhccCCCCcc
Confidence 99999999997643 6777888999999999999999999999999987642 6899999999988888899
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCC---------CChHHHHHhhhhhhcccCCCCHHHHHH
Q 025672 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK---------LAPEEIRSKATDYMAAYKFGEKWDIAM 238 (249)
Q Consensus 168 ~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~dva~ 238 (249)
.|+++|+++..++++++.|++ ++||++++|+||++.|+..... ...++..+.+....+.+++.+|+|+++
T Consensus 153 ~Y~~sK~a~~~l~~~~a~~~~-~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~ 231 (258)
T PRK07890 153 AYKMAKGALLAASQSLATELG-PQGIRVNSVAPGYIWGDPLKGYFRHQAGKYGVTVEQIYAETAANSDLKRLPTDDEVAS 231 (258)
T ss_pred hhHHHHHHHHHHHHHHHHHHh-hcCcEEEEEeCCccCcHHHHHHhhhcccccCCCHHHHHHHHhhcCCccccCCHHHHHH
Confidence 999999999999999999998 8899999999999998754221 123444455556678889999999999
Q ss_pred HHHHhccCC
Q 025672 239 AALYLASDA 247 (249)
Q Consensus 239 ~v~~l~s~~ 247 (249)
++.||+++.
T Consensus 232 a~~~l~~~~ 240 (258)
T PRK07890 232 AVLFLASDL 240 (258)
T ss_pred HHHHHcCHh
Confidence 999999864
|
|
| >PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-40 Score=272.27 Aligned_cols=224 Identities=30% Similarity=0.375 Sum_probs=190.9
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
+++++|+++||||++|||++++++|+++|++|++++++....+ ..++.++.+|++|+++++++++++.+.+
T Consensus 5 ~~l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~---------~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 75 (266)
T PRK06171 5 LNLQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQ---------HENYQFVPTDVSSAEEVNHTVAEIIEKF 75 (266)
T ss_pred ccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccccc---------cCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence 4578999999999999999999999999999999999876432 2367889999999999999999999999
Q ss_pred CCccEEEEcCCCCCCC---------CCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccc
Q 025672 88 GKLDILVNAAAGNFLV---------PAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL 158 (249)
Q Consensus 88 ~~id~vi~~ag~~~~~---------~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~ 158 (249)
+++|++|||||..... +..+.+.++|++.+++|+.+++.+++++.+.|.++.. |+||++||..
T Consensus 76 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--------g~iv~isS~~ 147 (266)
T PRK06171 76 GRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHD--------GVIVNMSSEA 147 (266)
T ss_pred CCCCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCC--------cEEEEEcccc
Confidence 9999999999975432 2345788999999999999999999999999987643 8899999999
Q ss_pred ccccCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCC-----------CChHHHHHhhhh--hh
Q 025672 159 HYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK-----------LAPEEIRSKATD--YM 225 (249)
Q Consensus 159 ~~~~~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~-----------~~~~~~~~~~~~--~~ 225 (249)
+..+.++...|+++|+++.+|+++++.|++ ++||+||+|+||+++++.+... ...++..+.+.. ..
T Consensus 148 ~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~-~~gi~v~~v~pG~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (266)
T PRK06171 148 GLEGSEGQSCYAATKAALNSFTRSWAKELG-KHNIRVVGVAPGILEATGLRTPEYEEALAYTRGITVEQLRAGYTKTSTI 226 (266)
T ss_pred ccCCCCCCchhHHHHHHHHHHHHHHHHHhh-hcCeEEEEEeccccccCCCcChhhhhhhccccCCCHHHHHhhhcccccc
Confidence 998888899999999999999999999998 8999999999999974332211 112333344444 67
Q ss_pred cccCCCCHHHHHHHHHHhccCCCC
Q 025672 226 AAYKFGEKWDIAMAALYLASDAGQ 249 (249)
Q Consensus 226 ~~~~~~~~~dva~~v~~l~s~~a~ 249 (249)
|++|+++|+|||+++.||+|++++
T Consensus 227 p~~r~~~~~eva~~~~fl~s~~~~ 250 (266)
T PRK06171 227 PLGRSGKLSEVADLVCYLLSDRAS 250 (266)
T ss_pred cCCCCCCHHHhhhheeeeeccccc
Confidence 899999999999999999998753
|
|
| >PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-39 Score=266.61 Aligned_cols=228 Identities=28% Similarity=0.395 Sum_probs=193.4
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCC-cchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHH
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR-KTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~-~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 86 (249)
|++++|+++||||++|||+++++.|+++|++|+++.++ .+..+.+.+++ +.++.++++|++|+++++.+++++.+.
T Consensus 1 ~~l~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~ 77 (253)
T PRK08642 1 MQISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADEL---GDRAIALQADVTDREQVQAMFATATEH 77 (253)
T ss_pred CCCCCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHh---CCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 45788999999999999999999999999999887654 44445444443 357889999999999999999999988
Q ss_pred hCC-ccEEEEcCCCCC------CCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccc
Q 025672 87 FGK-LDILVNAAAGNF------LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH 159 (249)
Q Consensus 87 ~~~-id~vi~~ag~~~------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~ 159 (249)
+++ +|++|||||... ..++.+.+.++|++.+++|+.+++.+++++++.|.+.+. |+||++||..+
T Consensus 78 ~g~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--------g~iv~iss~~~ 149 (253)
T PRK08642 78 FGKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGF--------GRIINIGTNLF 149 (253)
T ss_pred hCCCCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCC--------eEEEEECCccc
Confidence 887 999999998632 235678889999999999999999999999999976543 88999999877
Q ss_pred cccCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHH
Q 025672 160 YTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMA 239 (249)
Q Consensus 160 ~~~~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~ 239 (249)
..+..+...|+++|+++++|++++++|++ ++||+||+|+||+++|+..... .+++..+.+....|++++.+|+|++++
T Consensus 150 ~~~~~~~~~Y~~sK~a~~~l~~~la~~~~-~~~i~v~~i~pG~v~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~va~~ 227 (253)
T PRK08642 150 QNPVVPYHDYTTAKAALLGLTRNLAAELG-PYGITVNMVSGGLLRTTDASAA-TPDEVFDLIAATTPLRKVTTPQEFADA 227 (253)
T ss_pred cCCCCCccchHHHHHHHHHHHHHHHHHhC-ccCeEEEEEeecccCCchhhcc-CCHHHHHHHHhcCCcCCCCCHHHHHHH
Confidence 77777778999999999999999999998 8899999999999998754433 234455556677889999999999999
Q ss_pred HHHhccCCC
Q 025672 240 ALYLASDAG 248 (249)
Q Consensus 240 v~~l~s~~a 248 (249)
+.||+++++
T Consensus 228 ~~~l~~~~~ 236 (253)
T PRK08642 228 VLFFASPWA 236 (253)
T ss_pred HHHHcCchh
Confidence 999999864
|
|
| >PRK08862 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-40 Score=263.95 Aligned_cols=213 Identities=18% Similarity=0.242 Sum_probs=184.0
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
|++++|+++||||++|||++++++|+++|++|++++|+.++++++.+++...+.++..+.+|++|+++++++++++.+.+
T Consensus 1 ~~~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 80 (227)
T PRK08862 1 MDIKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQF 80 (227)
T ss_pred CCCCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHh
Confidence 35789999999999999999999999999999999999999999888887767778899999999999999999999999
Q ss_pred C-CccEEEEcCCCCC-CCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCcc
Q 025672 88 G-KLDILVNAAAGNF-LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY 165 (249)
Q Consensus 88 ~-~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~ 165 (249)
+ ++|++|||+|... ..++.+.+.++|.+.+++|+.+++.+++.++|+|.+++. +|+||++||..+. ++
T Consensus 81 g~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~-------~g~Iv~isS~~~~---~~ 150 (227)
T PRK08862 81 NRAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNK-------KGVIVNVISHDDH---QD 150 (227)
T ss_pred CCCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC-------CceEEEEecCCCC---CC
Confidence 8 9999999998643 457888899999999999999999999999999986532 3889999997543 45
Q ss_pred chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhcc
Q 025672 166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245 (249)
Q Consensus 166 ~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s 245 (249)
...|+++|+|+.+|+++++.|++ ++||+||+|+||+++|+.. ..++.+.+ .. ||++.++.||++
T Consensus 151 ~~~Y~asKaal~~~~~~la~el~-~~~Irvn~v~PG~i~t~~~---~~~~~~~~-~~-----------~~~~~~~~~l~~ 214 (227)
T PRK08862 151 LTGVESSNALVSGFTHSWAKELT-PFNIRVGGVVPSIFSANGE---LDAVHWAE-IQ-----------DELIRNTEYIVA 214 (227)
T ss_pred cchhHHHHHHHHHHHHHHHHHHh-hcCcEEEEEecCcCcCCCc---cCHHHHHH-HH-----------HHHHhheeEEEe
Confidence 77899999999999999999998 8999999999999998621 12222211 11 799999999997
Q ss_pred C
Q 025672 246 D 246 (249)
Q Consensus 246 ~ 246 (249)
.
T Consensus 215 ~ 215 (227)
T PRK08862 215 N 215 (227)
T ss_pred c
Confidence 3
|
|
| >PRK06841 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-39 Score=266.26 Aligned_cols=228 Identities=37% Similarity=0.539 Sum_probs=197.4
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
+++++|+++||||++|||.+++++|+++|++|++++|+.+. .....++. +.++.++++|++++++++++++++.+.+
T Consensus 11 ~~~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~-~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (255)
T PRK06841 11 FDLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDV-AEVAAQLL--GGNAKGLVCDVSDSQSVEAAVAAVISAF 87 (255)
T ss_pred cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHHhh--CCceEEEEecCCCHHHHHHHHHHHHHHh
Confidence 46789999999999999999999999999999999998753 33333432 3457789999999999999999999999
Q ss_pred CCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch
Q 025672 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 167 (249)
Q Consensus 88 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~ 167 (249)
+++|++|||+|.....++.+.+.++++..+++|+.+++++++++.+.|.++.. ++||++||..+..+.+...
T Consensus 88 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--------~~iv~~sS~~~~~~~~~~~ 159 (255)
T PRK06841 88 GRIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGG--------GKIVNLASQAGVVALERHV 159 (255)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCC--------ceEEEEcchhhccCCCCCc
Confidence 99999999999877777778889999999999999999999999999987643 8899999999888888999
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhccCC
Q 025672 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247 (249)
Q Consensus 168 ~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~ 247 (249)
.|+++|+++.+++++++.|++ ++||+||+|+||+++|+....... ....+......|.+++.+|+|++++++||++++
T Consensus 160 ~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~pg~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~ 237 (255)
T PRK06841 160 AYCASKAGVVGMTKVLALEWG-PYGITVNAISPTVVLTELGKKAWA-GEKGERAKKLIPAGRFAYPEEIAAAALFLASDA 237 (255)
T ss_pred hHHHHHHHHHHHHHHHHHHHH-hhCeEEEEEEeCcCcCcccccccc-hhHHHHHHhcCCCCCCcCHHHHHHHHHHHcCcc
Confidence 999999999999999999998 889999999999999876443322 222334455678899999999999999999986
Q ss_pred C
Q 025672 248 G 248 (249)
Q Consensus 248 a 248 (249)
+
T Consensus 238 ~ 238 (255)
T PRK06841 238 A 238 (255)
T ss_pred c
Confidence 4
|
|
| >PRK05717 oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-39 Score=265.64 Aligned_cols=229 Identities=25% Similarity=0.317 Sum_probs=196.0
Q ss_pred CCCCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHH
Q 025672 5 FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTI 84 (249)
Q Consensus 5 ~~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 84 (249)
.+++.+++|+++||||++|||++++++|+++|++|++++|+.++.++..+++ +.++.++++|++++++++++++++.
T Consensus 3 ~~~~~~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~~ 79 (255)
T PRK05717 3 EPNPGHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKAL---GENAWFIAMDVADEAQVAAGVAEVL 79 (255)
T ss_pred CCCcccCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHc---CCceEEEEccCCCHHHHHHHHHHHH
Confidence 4567788999999999999999999999999999999999877666655444 4568899999999999999999999
Q ss_pred HHhCCccEEEEcCCCCCC--CCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc
Q 025672 85 NHFGKLDILVNAAAGNFL--VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 162 (249)
Q Consensus 85 ~~~~~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~ 162 (249)
+.++++|++|||||.... .++.+.+.++|+..+++|+.+++.+++++.|.|.+. +|+||++||..+..+
T Consensus 80 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~---------~g~ii~~sS~~~~~~ 150 (255)
T PRK05717 80 GQFGRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAH---------NGAIVNLASTRARQS 150 (255)
T ss_pred HHhCCCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc---------CcEEEEEcchhhcCC
Confidence 999999999999998643 567778899999999999999999999999999764 278999999999888
Q ss_pred CccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHH
Q 025672 163 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALY 242 (249)
Q Consensus 163 ~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~ 242 (249)
.+....|+++|++++++++.++.+++ + +|+|++|+||+++|++..... .+..........|.+|.++|+|++.++.|
T Consensus 151 ~~~~~~Y~~sKaa~~~~~~~la~~~~-~-~i~v~~i~Pg~i~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~va~~~~~ 227 (255)
T PRK05717 151 EPDTEAYAASKGGLLALTHALAISLG-P-EIRVNAVSPGWIDARDPSQRR-AEPLSEADHAQHPAGRVGTVEDVAAMVAW 227 (255)
T ss_pred CCCCcchHHHHHHHHHHHHHHHHHhc-C-CCEEEEEecccCcCCcccccc-chHHHHHHhhcCCCCCCcCHHHHHHHHHH
Confidence 88899999999999999999999996 5 599999999999987533221 22233333445678899999999999999
Q ss_pred hccCCC
Q 025672 243 LASDAG 248 (249)
Q Consensus 243 l~s~~a 248 (249)
|+++.+
T Consensus 228 l~~~~~ 233 (255)
T PRK05717 228 LLSRQA 233 (255)
T ss_pred HcCchh
Confidence 998753
|
|
| >PRK08063 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-39 Score=263.81 Aligned_cols=230 Identities=30% Similarity=0.408 Sum_probs=201.5
Q ss_pred CCCcEEEEecCCCchhHHHHHHHHHcCCeEEE-EeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhC
Q 025672 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAI-MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (249)
Q Consensus 10 l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l-~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 88 (249)
+++|+++||||++|||++++++|+++|++|++ .+|+.++.+++.+++...+.++.++.+|++|+++++++++++.+.++
T Consensus 2 ~~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (250)
T PRK08063 2 FSGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFG 81 (250)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 46899999999999999999999999999876 57888778888888877777899999999999999999999999999
Q ss_pred CccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchh
Q 025672 89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH 168 (249)
Q Consensus 89 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~ 168 (249)
++|+||||+|.....++.+.+.++++..+++|+.+++.+++++++.|.+++. |+||++||..+..+.++...
T Consensus 82 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~--------g~iv~~sS~~~~~~~~~~~~ 153 (250)
T PRK08063 82 RLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGG--------GKIISLSSLGSIRYLENYTT 153 (250)
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC--------eEEEEEcchhhccCCCCccH
Confidence 9999999999877778888899999999999999999999999999987643 88999999888888788899
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhccCCC
Q 025672 169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAG 248 (249)
Q Consensus 169 y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~a 248 (249)
|+++|+++++|+++++.|+. +.||++++|+||+++|+...................+.+++.+++|+++++.+++++++
T Consensus 154 y~~sK~a~~~~~~~~~~~~~-~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~ 232 (250)
T PRK08063 154 VGVSKAALEALTRYLAVELA-PKGIAVNAVSGGAVDTDALKHFPNREELLEDARAKTPAGRMVEPEDVANAVLFLCSPEA 232 (250)
T ss_pred HHHHHHHHHHHHHHHHHHHh-HhCeEEEeEecCcccCchhhhccCchHHHHHHhcCCCCCCCcCHHHHHHHHHHHcCchh
Confidence 99999999999999999998 88999999999999976543332333444445556677889999999999999998753
|
|
| >PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-39 Score=265.17 Aligned_cols=229 Identities=22% Similarity=0.308 Sum_probs=198.6
Q ss_pred CcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhc-C-CCeeEEEccCCCHHHHHHHHHHHHHHhCC
Q 025672 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL-G-IPAIGLEGDVRKREDAVRVVESTINHFGK 89 (249)
Q Consensus 12 ~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~-~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 89 (249)
+|++|||||+++||.+++++|+++|++|++++|+...++...+++... + .++.++.+|++|+++++++++++.+.+++
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~ 81 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGR 81 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 689999999999999999999999999999999988888877777543 2 46899999999999999999999999999
Q ss_pred ccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhh
Q 025672 90 LDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHV 169 (249)
Q Consensus 90 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y 169 (249)
+|++|||||.....++.+.+.++|++.+++|+.+++++++++++.|.+++. .++||++||..+..+.+....|
T Consensus 82 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~-------~~~iv~~ss~~~~~~~~~~~~Y 154 (259)
T PRK12384 82 VDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGI-------QGRIIQINSKSGKVGSKHNSGY 154 (259)
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCC-------CcEEEEecCcccccCCCCCchh
Confidence 999999999887778888899999999999999999999999999976541 2789999998888887888899
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCC----------ChHHHHHhhhhhhcccCCCCHHHHHHH
Q 025672 170 SAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL----------APEEIRSKATDYMAAYKFGEKWDIAMA 239 (249)
Q Consensus 170 ~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~dva~~ 239 (249)
+++|+|+++++++++.|++ ++||+|++|.||++.++.+.... .+++..+.+.+..|++|+.+++|++++
T Consensus 155 ~~sKaa~~~l~~~la~e~~-~~gi~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~ 233 (259)
T PRK12384 155 SAAKFGGVGLTQSLALDLA-EYGITVHSLMLGNLLKSPMFQSLLPQYAKKLGIKPDEVEQYYIDKVPLKRGCDYQDVLNM 233 (259)
T ss_pred HHHHHHHHHHHHHHHHHHH-HcCcEEEEEecCCcccchhhhhhhHHHHHhcCCChHHHHHHHHHhCcccCCCCHHHHHHH
Confidence 9999999999999999998 88999999999986434332221 123444455667889999999999999
Q ss_pred HHHhccCCC
Q 025672 240 ALYLASDAG 248 (249)
Q Consensus 240 v~~l~s~~a 248 (249)
+.||+++++
T Consensus 234 ~~~l~~~~~ 242 (259)
T PRK12384 234 LLFYASPKA 242 (259)
T ss_pred HHHHcCccc
Confidence 999998764
|
|
| >PRK12938 acetyacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-39 Score=262.40 Aligned_cols=228 Identities=25% Similarity=0.335 Sum_probs=197.9
Q ss_pred CCCcEEEEecCCCchhHHHHHHHHHcCCeEEEE-eCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhC
Q 025672 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIM-GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (249)
Q Consensus 10 l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~-~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 88 (249)
+++|+++|||+++|||++++++|+++|++|++. +++....++..+++...+.++.++.+|++|.++++++++++.+.++
T Consensus 1 ~~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 80 (246)
T PRK12938 1 MSQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVG 80 (246)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence 468999999999999999999999999998875 4555556666667766677888999999999999999999999999
Q ss_pred CccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchh
Q 025672 89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH 168 (249)
Q Consensus 89 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~ 168 (249)
++|+||||+|.....++.+.+.++|++.+++|+.+++.+++++++.|.+++. ++||++||..+..+.++...
T Consensus 81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~--------~~iv~isS~~~~~~~~~~~~ 152 (246)
T PRK12938 81 EIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGW--------GRIINISSVNGQKGQFGQTN 152 (246)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCC--------eEEEEEechhccCCCCCChh
Confidence 9999999999876667788899999999999999999999999999977643 78999999988888888999
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhccCCC
Q 025672 169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAG 248 (249)
Q Consensus 169 y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~a 248 (249)
|+++|+++++++++++.|+. ++||++|+|+||+++|+.... .. ++..+.+....|..++.+++|+++++.||+++.+
T Consensus 153 y~~sK~a~~~~~~~l~~~~~-~~gi~v~~i~pg~~~t~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~v~~~~~~l~~~~~ 229 (246)
T PRK12938 153 YSTAKAGIHGFTMSLAQEVA-TKGVTVNTVSPGYIGTDMVKA-IR-PDVLEKIVATIPVRRLGSPDEIGSIVAWLASEES 229 (246)
T ss_pred HHHHHHHHHHHHHHHHHHhh-hhCeEEEEEEecccCCchhhh-cC-hHHHHHHHhcCCccCCcCHHHHHHHHHHHcCccc
Confidence 99999999999999999998 889999999999999875432 22 2334445556778889999999999999999864
|
|
| >PRK06701 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-39 Score=267.43 Aligned_cols=230 Identities=34% Similarity=0.429 Sum_probs=200.0
Q ss_pred CCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcc-hHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHH
Q 025672 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT-VLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN 85 (249)
Q Consensus 7 ~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~-~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 85 (249)
..++++|++|||||++|||.+++++|+++|++|++++|+.. ..+...+.+...+.++.++.+|++|.++++++++++.+
T Consensus 41 ~~~~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~ 120 (290)
T PRK06701 41 SGKLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVR 120 (290)
T ss_pred ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence 45788999999999999999999999999999999999864 35566666665567889999999999999999999999
Q ss_pred HhCCccEEEEcCCCCC-CCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCc
Q 025672 86 HFGKLDILVNAAAGNF-LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW 164 (249)
Q Consensus 86 ~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~ 164 (249)
.++++|+||||||... ..++.+.+.++|...+++|+.+++.+++++++.|.+. ++||++||..++.+.+
T Consensus 121 ~~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~----------g~iV~isS~~~~~~~~ 190 (290)
T PRK06701 121 ELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQG----------SAIINTGSITGYEGNE 190 (290)
T ss_pred HcCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhC----------CeEEEEecccccCCCC
Confidence 9999999999999764 3567788999999999999999999999999998542 7799999999988888
Q ss_pred cchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhc
Q 025672 165 YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLA 244 (249)
Q Consensus 165 ~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~ 244 (249)
....|+++|+|+.+++++++.++. ++||+|++|+||+++|+....... ++..+.+....+.+++.+++|++++++||+
T Consensus 191 ~~~~Y~~sK~a~~~l~~~la~~~~-~~gIrv~~i~pG~v~T~~~~~~~~-~~~~~~~~~~~~~~~~~~~~dva~~~~~ll 268 (290)
T PRK06701 191 TLIDYSATKGAIHAFTRSLAQSLV-QKGIRVNAVAPGPIWTPLIPSDFD-EEKVSQFGSNTPMQRPGQPEELAPAYVFLA 268 (290)
T ss_pred CcchhHHHHHHHHHHHHHHHHHhh-hcCeEEEEEecCCCCCcccccccC-HHHHHHHHhcCCcCCCcCHHHHHHHHHHHc
Confidence 889999999999999999999998 889999999999999875443332 233344556678889999999999999999
Q ss_pred cCCC
Q 025672 245 SDAG 248 (249)
Q Consensus 245 s~~a 248 (249)
++.+
T Consensus 269 ~~~~ 272 (290)
T PRK06701 269 SPDS 272 (290)
T ss_pred Cccc
Confidence 9864
|
|
| >PRK08278 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-39 Score=266.53 Aligned_cols=223 Identities=29% Similarity=0.359 Sum_probs=192.4
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcch-------HHHHHHHHHhcCCCeeEEEccCCCHHHHHHHH
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTV-------LRSAVAALHSLGIPAIGLEGDVRKREDAVRVV 80 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~-------~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~ 80 (249)
+++++|+++||||++|||++++++|+++|++|++++|+.+. +++..+++...+.++.++++|++++++++.++
T Consensus 2 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~ 81 (273)
T PRK08278 2 MSLSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAV 81 (273)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHH
Confidence 45789999999999999999999999999999999998653 45566667666778999999999999999999
Q ss_pred HHHHHHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccc
Q 025672 81 ESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY 160 (249)
Q Consensus 81 ~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~ 160 (249)
+++.+.++++|++|||+|.....++.+.+.++|++.+++|+.+++++++++.|.|.++. +|+|+++||..+.
T Consensus 82 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~--------~g~iv~iss~~~~ 153 (273)
T PRK08278 82 AKAVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSE--------NPHILTLSPPLNL 153 (273)
T ss_pred HHHHHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcC--------CCEEEEECCchhc
Confidence 99999999999999999987777788889999999999999999999999999998764 3889999998877
Q ss_pred ccC--ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecC-ccccccccCCCChHHHHHhhhhhhcccCCCCHHHHH
Q 025672 161 TAT--WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG-PIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIA 237 (249)
Q Consensus 161 ~~~--~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG-~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva 237 (249)
.+. ++...|++||+++++|+++++.|+. ++||+||+|+|| +++|+....... ...+..++.+|++++
T Consensus 154 ~~~~~~~~~~Y~~sK~a~~~~~~~la~el~-~~~I~v~~i~Pg~~i~t~~~~~~~~---------~~~~~~~~~~p~~va 223 (273)
T PRK08278 154 DPKWFAPHTAYTMAKYGMSLCTLGLAEEFR-DDGIAVNALWPRTTIATAAVRNLLG---------GDEAMRRSRTPEIMA 223 (273)
T ss_pred cccccCCcchhHHHHHHHHHHHHHHHHHhh-hcCcEEEEEeCCCccccHHHHhccc---------ccccccccCCHHHHH
Confidence 776 7788999999999999999999998 899999999999 577653221111 122456789999999
Q ss_pred HHHHHhccCCC
Q 025672 238 MAALYLASDAG 248 (249)
Q Consensus 238 ~~v~~l~s~~a 248 (249)
++++||+++.+
T Consensus 224 ~~~~~l~~~~~ 234 (273)
T PRK08278 224 DAAYEILSRPA 234 (273)
T ss_pred HHHHHHhcCcc
Confidence 99999998754
|
|
| >PRK05876 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-39 Score=267.41 Aligned_cols=228 Identities=22% Similarity=0.246 Sum_probs=193.6
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhC
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 88 (249)
.+++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++...+.++.++.+|++|+++++++++++.+.++
T Consensus 3 ~~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 82 (275)
T PRK05876 3 GFPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLG 82 (275)
T ss_pred CcCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence 37799999999999999999999999999999999999888888888876677889999999999999999999999999
Q ss_pred CccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchh
Q 025672 89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH 168 (249)
Q Consensus 89 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~ 168 (249)
++|+||||||.....++.+.+.++|+..+++|+.+++.++++++|.|.+++. +|+||++||..+..+.++...
T Consensus 83 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~-------~g~iv~isS~~~~~~~~~~~~ 155 (275)
T PRK05876 83 HVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGT-------GGHVVFTASFAGLVPNAGLGA 155 (275)
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCC-------CCEEEEeCChhhccCCCCCch
Confidence 9999999999887788888999999999999999999999999999977542 388999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCC--hHHHH-----HhhhhhhcccCCCCHHHHHHHHH
Q 025672 169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA--PEEIR-----SKATDYMAAYKFGEKWDIAMAAL 241 (249)
Q Consensus 169 y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~--~~~~~-----~~~~~~~~~~~~~~~~dva~~v~ 241 (249)
|+++|+++.+|+++++.|++ ++||+|++|+||+++|++...... ..... ...........+.+|+|+|++++
T Consensus 156 Y~asK~a~~~~~~~l~~e~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~ 234 (275)
T PRK05876 156 YGVAKYGVVGLAETLAREVT-ADGIGVSVLCPMVVETNLVANSERIRGAACAQSSTTGSPGPLPLQDDNLGVDDIAQLTA 234 (275)
T ss_pred HHHHHHHHHHHHHHHHHHhh-hcCcEEEEEEeCccccccccchhhhcCccccccccccccccccccccCCCHHHHHHHHH
Confidence 99999999999999999998 889999999999999875432110 00000 00011111234678999999987
Q ss_pred Hhc
Q 025672 242 YLA 244 (249)
Q Consensus 242 ~l~ 244 (249)
-.+
T Consensus 235 ~ai 237 (275)
T PRK05876 235 DAI 237 (275)
T ss_pred HHH
Confidence 654
|
|
| >PRK06523 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-39 Score=263.86 Aligned_cols=223 Identities=24% Similarity=0.281 Sum_probs=189.0
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
.++++|++|||||++|||++++++|+++|++|++++|+.+.. ...++.++++|++|+++++++++++.+.+
T Consensus 5 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~---------~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 75 (260)
T PRK06523 5 LELAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDD---------LPEGVEFVAADLTTAEGCAAVARAVLERL 75 (260)
T ss_pred cCCCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhh---------cCCceeEEecCCCCHHHHHHHHHHHHHHc
Confidence 457899999999999999999999999999999999986531 23468899999999999999999999999
Q ss_pred CCccEEEEcCCCCC--CCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCc-
Q 025672 88 GKLDILVNAAAGNF--LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW- 164 (249)
Q Consensus 88 ~~id~vi~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~- 164 (249)
+++|+||||||... ..++.+.+.++|++.+++|+.+++.++++++|.|.+++. |+||++||..+..+.+
T Consensus 76 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~--------g~ii~isS~~~~~~~~~ 147 (260)
T PRK06523 76 GGVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGS--------GVIIHVTSIQRRLPLPE 147 (260)
T ss_pred CCCCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCC--------cEEEEEecccccCCCCC
Confidence 99999999999653 356677889999999999999999999999999987643 8899999998887755
Q ss_pred cchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCC---------CChHHHHHhh---hhhhcccCCCC
Q 025672 165 YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK---------LAPEEIRSKA---TDYMAAYKFGE 232 (249)
Q Consensus 165 ~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~---------~~~~~~~~~~---~~~~~~~~~~~ 232 (249)
+...|+++|+++++|++.++.|++ ++||++|+|+||+++|++.... ...++..+.+ ....|.+|+.+
T Consensus 148 ~~~~Y~~sK~a~~~l~~~~a~~~~-~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 226 (260)
T PRK06523 148 STTAYAAAKAALSTYSKSLSKEVA-PKGVRVNTVSPGWIETEAAVALAERLAEAAGTDYEGAKQIIMDSLGGIPLGRPAE 226 (260)
T ss_pred CcchhHHHHHHHHHHHHHHHHHHh-hcCcEEEEEecCcccCccHHHHHHHHHhhcCCCHHHHHHHHHHHhccCccCCCCC
Confidence 788999999999999999999998 8899999999999998754211 1112222211 23468889999
Q ss_pred HHHHHHHHHHhccCCC
Q 025672 233 KWDIAMAALYLASDAG 248 (249)
Q Consensus 233 ~~dva~~v~~l~s~~a 248 (249)
|+|+++++.||+++++
T Consensus 227 ~~~va~~~~~l~s~~~ 242 (260)
T PRK06523 227 PEEVAELIAFLASDRA 242 (260)
T ss_pred HHHHHHHHHHHhCccc
Confidence 9999999999999864
|
|
| >PRK12937 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-39 Score=260.80 Aligned_cols=229 Identities=29% Similarity=0.380 Sum_probs=201.0
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcc-hHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHH
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT-VLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~-~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 86 (249)
|++++|+++||||++|||++++++|+++|++|+++.|+.+ ..+.+.+++...+.++.++++|++|+++++++++++.+.
T Consensus 1 ~~~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 80 (245)
T PRK12937 1 MTLSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETA 80 (245)
T ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 4578999999999999999999999999999988877543 456677777666778999999999999999999999999
Q ss_pred hCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccc
Q 025672 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ 166 (249)
Q Consensus 87 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~ 166 (249)
++++|++|||+|.....++.+.+.+++++++++|+.+++.+++++++.|.+. ++||++||..+..+.+++
T Consensus 81 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~----------~~iv~~ss~~~~~~~~~~ 150 (245)
T PRK12937 81 FGRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQG----------GRIINLSTSVIALPLPGY 150 (245)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccC----------cEEEEEeeccccCCCCCC
Confidence 9999999999998766777788899999999999999999999999998542 789999999888888889
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhccC
Q 025672 167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246 (249)
Q Consensus 167 ~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~ 246 (249)
..|+++|++++.++++++.|+. +.||+++.|+||++.|++...... +.....+....|++++.+++|+++++.||+++
T Consensus 151 ~~Y~~sK~a~~~~~~~~a~~~~-~~~i~v~~i~pg~~~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~ 228 (245)
T PRK12937 151 GPYAASKAAVEGLVHVLANELR-GRGITVNAVAPGPVATELFFNGKS-AEQIDQLAGLAPLERLGTPEEIAAAVAFLAGP 228 (245)
T ss_pred chhHHHHHHHHHHHHHHHHHhh-hcCeEEEEEEeCCccCchhcccCC-HHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCc
Confidence 9999999999999999999998 889999999999999876433333 33455666778899999999999999999987
Q ss_pred CC
Q 025672 247 AG 248 (249)
Q Consensus 247 ~a 248 (249)
.+
T Consensus 229 ~~ 230 (245)
T PRK12937 229 DG 230 (245)
T ss_pred cc
Confidence 64
|
|
| >TIGR02415 23BDH acetoin reductases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-39 Score=262.30 Aligned_cols=228 Identities=26% Similarity=0.338 Sum_probs=201.3
Q ss_pred cEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCccE
Q 025672 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI 92 (249)
Q Consensus 13 k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ 92 (249)
|+++|||++++||.+++++|+++|++|++++|+.+.++++.+++...+.++.++.+|++|+++++++++++.+.++++|+
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~ 80 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFDV 80 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 68999999999999999999999999999999988888888888777778999999999999999999999999999999
Q ss_pred EEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhhHHH
Q 025672 93 LVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAA 172 (249)
Q Consensus 93 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~~s 172 (249)
||||+|.....++.+.+.++|++.+++|+.+++.+++.+++.|.+.+. +++||++||..+..+.+....|+.+
T Consensus 81 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~-------~~~iv~~sS~~~~~~~~~~~~Y~~s 153 (254)
T TIGR02415 81 MVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGH-------GGKIINAASIAGHEGNPILSAYSST 153 (254)
T ss_pred EEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCC-------CeEEEEecchhhcCCCCCCcchHHH
Confidence 999999877778888999999999999999999999999999987542 3789999999999898999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCC---------hHHHHHhhhhhhcccCCCCHHHHHHHHHHh
Q 025672 173 KAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA---------PEEIRSKATDYMAAYKFGEKWDIAMAALYL 243 (249)
Q Consensus 173 K~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~dva~~v~~l 243 (249)
|+++++|++.++.|+. +.||+|+.|+||+++|++...... .......+....+.+++.+|+|+++++.||
T Consensus 154 K~a~~~~~~~l~~~~~-~~~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l 232 (254)
T TIGR02415 154 KFAVRGLTQTAAQELA-PKGITVNAYCPGIVKTPMWEEIDEETSEIAGKPIGEGFEEFSSEIALGRPSEPEDVAGLVSFL 232 (254)
T ss_pred HHHHHHHHHHHHHHhc-ccCeEEEEEecCcccChhhhhhhhhhhhcccCchHHHHHHHHhhCCCCCCCCHHHHHHHHHhh
Confidence 9999999999999998 889999999999999875322110 112233445567888999999999999999
Q ss_pred ccCCC
Q 025672 244 ASDAG 248 (249)
Q Consensus 244 ~s~~a 248 (249)
+++.+
T Consensus 233 ~~~~~ 237 (254)
T TIGR02415 233 ASEDS 237 (254)
T ss_pred ccccc
Confidence 99864
|
One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733). |
| >PRK07109 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-39 Score=272.60 Aligned_cols=228 Identities=23% Similarity=0.311 Sum_probs=198.9
Q ss_pred CCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHH
Q 025672 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (249)
Q Consensus 7 ~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 86 (249)
...+++|+++||||++|||++++++|+++|++|++++|+.+.++++.+++...+.++.++.+|++|+++++++++++.+.
T Consensus 3 ~~~l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~ 82 (334)
T PRK07109 3 LKPIGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEE 82 (334)
T ss_pred CCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 34578999999999999999999999999999999999999999998888877888999999999999999999999999
Q ss_pred hCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccc
Q 025672 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ 166 (249)
Q Consensus 87 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~ 166 (249)
++++|++|||+|.....++.+.+.+++++.+++|+.+++++++.+++.|.+++. |+||++||..+..+.+.+
T Consensus 83 ~g~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~--------g~iV~isS~~~~~~~~~~ 154 (334)
T PRK07109 83 LGPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDR--------GAIIQVGSALAYRSIPLQ 154 (334)
T ss_pred CCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC--------cEEEEeCChhhccCCCcc
Confidence 999999999999877778888999999999999999999999999999987643 889999999999998999
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcC-CCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhcc
Q 025672 167 IHVSAAKAAVDSITRSLALEWGT-DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245 (249)
Q Consensus 167 ~~y~~sK~a~~~l~~~la~e~~~-~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s 245 (249)
..|+++|+++.+|+++++.|+.. ..+|+++.|+||+++|+..... .... .....+..+..+|||+|++++++++
T Consensus 155 ~~Y~asK~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~~~~~--~~~~---~~~~~~~~~~~~pe~vA~~i~~~~~ 229 (334)
T PRK07109 155 SAYCAAKHAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQFDWA--RSRL---PVEPQPVPPIYQPEVVADAILYAAE 229 (334)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCchhhhh--hhhc---cccccCCCCCCCHHHHHHHHHHHHh
Confidence 99999999999999999999862 2579999999999998643211 0000 0112344567899999999999997
Q ss_pred CC
Q 025672 246 DA 247 (249)
Q Consensus 246 ~~ 247 (249)
+.
T Consensus 230 ~~ 231 (334)
T PRK07109 230 HP 231 (334)
T ss_pred CC
Confidence 64
|
|
| >PRK06483 dihydromonapterin reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-39 Score=259.94 Aligned_cols=217 Identities=20% Similarity=0.236 Sum_probs=184.6
Q ss_pred CcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCcc
Q 025672 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD 91 (249)
Q Consensus 12 ~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 91 (249)
+|++|||||++|||++++++|+++|++|++++|+.+... +++...+ +.++.+|++|+++++++++++.+.++++|
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~---~~~~~~~--~~~~~~D~~~~~~~~~~~~~~~~~~~~id 76 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAI---DGLRQAG--AQCIQADFSTNAGIMAFIDELKQHTDGLR 76 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHH---HHHHHcC--CEEEEcCCCCHHHHHHHHHHHHhhCCCcc
Confidence 589999999999999999999999999999999876432 3333323 67899999999999999999999999999
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhhHH
Q 025672 92 ILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSA 171 (249)
Q Consensus 92 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~~ 171 (249)
++|||||........+.+.++|++.+++|+.+++.+++.++|.|.+... ..|+||++||..+..+.++...|++
T Consensus 77 ~lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~------~~g~iv~~ss~~~~~~~~~~~~Y~a 150 (236)
T PRK06483 77 AIIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGH------AASDIIHITDYVVEKGSDKHIAYAA 150 (236)
T ss_pred EEEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCC------CCceEEEEcchhhccCCCCCccHHH
Confidence 9999999865555567788999999999999999999999999976531 1278999999988888888999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhcc
Q 025672 172 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245 (249)
Q Consensus 172 sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s 245 (249)
+|+++++|+++++.|++ + +||||+|+||++.|+.. .++...+......|++|..+|+|+++++.||++
T Consensus 151 sKaal~~l~~~~a~e~~-~-~irvn~v~Pg~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~ 218 (236)
T PRK06483 151 SKAALDNMTLSFAAKLA-P-EVKVNSIAPALILFNEG----DDAAYRQKALAKSLLKIEPGEEEIIDLVDYLLT 218 (236)
T ss_pred HHHHHHHHHHHHHHHHC-C-CcEEEEEccCceecCCC----CCHHHHHHHhccCccccCCCHHHHHHHHHHHhc
Confidence 99999999999999997 6 59999999999986432 123333444556788899999999999999997
|
|
| >TIGR01500 sepiapter_red sepiapterin reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-39 Score=264.39 Aligned_cols=226 Identities=20% Similarity=0.185 Sum_probs=190.6
Q ss_pred EEEEecCCCchhHHHHHHHHH----cCCeEEEEeCCcchHHHHHHHHHh--cCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 14 VALLTGGGSGIGFEISLQLGK----HGAAIAIMGRRKTVLRSAVAALHS--LGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 14 ~~lItGa~~giG~~~a~~l~~----~G~~v~l~~r~~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
+++||||++|||++++++|++ .|++|++++|+.+.++++.+++.. .+.++.++.+|++|+++++++++++.+.+
T Consensus 2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~ 81 (256)
T TIGR01500 2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALRELP 81 (256)
T ss_pred EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhcc
Confidence 689999999999999999997 799999999999999988888865 24578899999999999999999998877
Q ss_pred CCc----cEEEEcCCCCCC--CCCCC-CCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccc
Q 025672 88 GKL----DILVNAAAGNFL--VPAED-LSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY 160 (249)
Q Consensus 88 ~~i----d~vi~~ag~~~~--~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~ 160 (249)
+.+ |++|||||.... ....+ .+.++|++.+++|+.+++.+++.++|.|.++.. ..++||++||..+.
T Consensus 82 g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~------~~~~iv~isS~~~~ 155 (256)
T TIGR01500 82 RPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPG------LNRTVVNISSLCAI 155 (256)
T ss_pred ccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCC------CCCEEEEECCHHhC
Confidence 653 699999997543 22232 256899999999999999999999999976421 13789999999999
Q ss_pred ccCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCC---CChHHHHHhhhhhhcccCCCCHHHHH
Q 025672 161 TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK---LAPEEIRSKATDYMAAYKFGEKWDIA 237 (249)
Q Consensus 161 ~~~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~dva 237 (249)
.+.++...|++||+|+.+|+++++.|++ ++||+||+|+||+++|++.... ...++..+.+....|++|+.+|+|+|
T Consensus 156 ~~~~~~~~Y~asKaal~~l~~~la~e~~-~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~eva 234 (256)
T TIGR01500 156 QPFKGWALYCAGKAARDMLFQVLALEEK-NPNVRVLNYAPGVLDTDMQQQVREESVDPDMRKGLQELKAKGKLVDPKVSA 234 (256)
T ss_pred CCCCCchHHHHHHHHHHHHHHHHHHHhc-CCCeEEEEecCCcccchHHHHHHHhcCChhHHHHHHHHHhcCCCCCHHHHH
Confidence 8988999999999999999999999998 8899999999999998754321 11223445566778899999999999
Q ss_pred HHHHHhccC
Q 025672 238 MAALYLASD 246 (249)
Q Consensus 238 ~~v~~l~s~ 246 (249)
++++||+++
T Consensus 235 ~~~~~l~~~ 243 (256)
T TIGR01500 235 QKLLSLLEK 243 (256)
T ss_pred HHHHHHHhc
Confidence 999999963
|
This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs. |
| >PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-38 Score=261.36 Aligned_cols=227 Identities=24% Similarity=0.300 Sum_probs=195.4
Q ss_pred CCCCCcEEEEecCCC--chhHHHHHHHHHcCCeEEEEeCC-----------cchHHHHHHHHHhcCCCeeEEEccCCCHH
Q 025672 8 DILKGKVALLTGGGS--GIGFEISLQLGKHGAAIAIMGRR-----------KTVLRSAVAALHSLGIPAIGLEGDVRKRE 74 (249)
Q Consensus 8 ~~l~~k~~lItGa~~--giG~~~a~~l~~~G~~v~l~~r~-----------~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~ 74 (249)
+++++|++|||||++ |||.+++++|+++|++|++++|+ ......+.+++...+.++.++++|+++++
T Consensus 1 ~~l~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~ 80 (256)
T PRK12748 1 LPLMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQPY 80 (256)
T ss_pred CCCCCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCHH
Confidence 356899999999995 99999999999999999999987 22222355556555678999999999999
Q ss_pred HHHHHHHHHHHHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEe
Q 025672 75 DAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINI 154 (249)
Q Consensus 75 ~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~i 154 (249)
+++.+++++.+.++++|+||||||+....++.+.+.+++++.+++|+.+++.+++++.+.|.+.. .++||++
T Consensus 81 ~~~~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--------~~~iv~~ 152 (256)
T PRK12748 81 APNRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKA--------GGRIINL 152 (256)
T ss_pred HHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcC--------CeEEEEE
Confidence 99999999999999999999999987777788889999999999999999999999999987654 3789999
Q ss_pred ccccccccCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHH
Q 025672 155 SATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKW 234 (249)
Q Consensus 155 ss~~~~~~~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (249)
||..+..+.++...|+++|+++++++++++.|+. ++||+|++|+||+++|+... +.....+....+..++.+|+
T Consensus 153 ss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~~i~v~~i~Pg~~~t~~~~-----~~~~~~~~~~~~~~~~~~~~ 226 (256)
T PRK12748 153 TSGQSLGPMPDELAYAATKGAIEAFTKSLAPELA-EKGITVNAVNPGPTDTGWIT-----EELKHHLVPKFPQGRVGEPV 226 (256)
T ss_pred CCccccCCCCCchHHHHHHHHHHHHHHHHHHHHH-HhCeEEEEEEeCcccCCCCC-----hhHHHhhhccCCCCCCcCHH
Confidence 9998888888889999999999999999999998 88999999999999876432 22333344556677889999
Q ss_pred HHHHHHHHhccCCC
Q 025672 235 DIAMAALYLASDAG 248 (249)
Q Consensus 235 dva~~v~~l~s~~a 248 (249)
|+++++.||+++++
T Consensus 227 ~~a~~~~~l~~~~~ 240 (256)
T PRK12748 227 DAARLIAFLVSEEA 240 (256)
T ss_pred HHHHHHHHHhCccc
Confidence 99999999999864
|
|
| >PRK06500 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-39 Score=260.58 Aligned_cols=226 Identities=29% Similarity=0.377 Sum_probs=195.8
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhC
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 88 (249)
++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++ +.++.++++|++|.+++..+++.+.+.++
T Consensus 3 ~~~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 79 (249)
T PRK06500 3 RLQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAEL---GESALVIRADAGDVAAQKALAQALAEAFG 79 (249)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHHhC
Confidence 467899999999999999999999999999999999877666665554 45788999999999999999999999999
Q ss_pred CccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchh
Q 025672 89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH 168 (249)
Q Consensus 89 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~ 168 (249)
++|++|||+|.....++.+.+.+++++.+++|+.+++.+++++.|.|.+. +++|+++|..+..+.+....
T Consensus 80 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~----------~~~i~~~S~~~~~~~~~~~~ 149 (249)
T PRK06500 80 RLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANP----------ASIVLNGSINAHIGMPNSSV 149 (249)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcC----------CEEEEEechHhccCCCCccH
Confidence 99999999998776777788999999999999999999999999998542 67999999888888888999
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCC----CChHHHHHhhhhhhcccCCCCHHHHHHHHHHhc
Q 025672 169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK----LAPEEIRSKATDYMAAYKFGEKWDIAMAALYLA 244 (249)
Q Consensus 169 y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~ 244 (249)
|+++|+++++++++++.|+. ++||++++|+||+++|++.... ...+...+.+....|+.++.+|+|+++++.||+
T Consensus 150 Y~~sK~a~~~~~~~la~e~~-~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~ 228 (249)
T PRK06500 150 YAASKAALLSLAKTLSGELL-PRGIRVNAVSPGPVQTPLYGKLGLPEATLDAVAAQIQALVPLGRFGTPEEIAKAVLYLA 228 (249)
T ss_pred HHHHHHHHHHHHHHHHHHhh-hcCeEEEEEeeCcCCCHHHHhhccCccchHHHHHHHHhcCCCCCCcCHHHHHHHHHHHc
Confidence 99999999999999999998 8899999999999998754321 112233344555668888999999999999999
Q ss_pred cCCC
Q 025672 245 SDAG 248 (249)
Q Consensus 245 s~~a 248 (249)
++.+
T Consensus 229 ~~~~ 232 (249)
T PRK06500 229 SDES 232 (249)
T ss_pred Cccc
Confidence 8754
|
|
| >PRK08628 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-39 Score=262.85 Aligned_cols=229 Identities=30% Similarity=0.328 Sum_probs=195.0
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
+++++|++|||||++|||++++++|+++|++|++++|+.+.. +..+++...+.++.++.+|++++++++++++++.+.+
T Consensus 3 ~~l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 81 (258)
T PRK08628 3 LNLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD-EFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKF 81 (258)
T ss_pred CCcCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhH-HHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhc
Confidence 568899999999999999999999999999999999988766 6667776667789999999999999999999999999
Q ss_pred CCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch
Q 025672 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 167 (249)
Q Consensus 88 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~ 167 (249)
+++|+||||+|......+...+ ++|+..+++|+.+++.+++.+.|.+.+. .++|+++||..+..+.++..
T Consensus 82 ~~id~vi~~ag~~~~~~~~~~~-~~~~~~~~~n~~~~~~~~~~~~~~~~~~---------~~~iv~~ss~~~~~~~~~~~ 151 (258)
T PRK08628 82 GRIDGLVNNAGVNDGVGLEAGR-EAFVASLERNLIHYYVMAHYCLPHLKAS---------RGAIVNISSKTALTGQGGTS 151 (258)
T ss_pred CCCCEEEECCcccCCCcccCCH-HHHHHHHhhhhHHHHHHHHHHHHHhhcc---------CcEEEEECCHHhccCCCCCc
Confidence 9999999999976555555444 8999999999999999999999988653 27899999999998888899
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCC----CChHHHHHhhhhhhccc-CCCCHHHHHHHHHH
Q 025672 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK----LAPEEIRSKATDYMAAY-KFGEKWDIAMAALY 242 (249)
Q Consensus 168 ~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~----~~~~~~~~~~~~~~~~~-~~~~~~dva~~v~~ 242 (249)
.|++||++++++++.++.|+. ++||+++.|+||+++|+..... ..++..........+.+ ++.+|+|+++++.|
T Consensus 152 ~Y~~sK~a~~~~~~~l~~e~~-~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~ 230 (258)
T PRK08628 152 GYAAAKGAQLALTREWAVALA-KDGVRVNAVIPAEVMTPLYENWIATFDDPEAKLAAITAKIPLGHRMTTAEEIADTAVF 230 (258)
T ss_pred hhHHHHHHHHHHHHHHHHHHh-hcCeEEEEEecCccCCHHHHHHhhhccCHHHHHHHHHhcCCccccCCCHHHHHHHHHH
Confidence 999999999999999999998 8899999999999998753221 11222223333445654 78999999999999
Q ss_pred hccCCC
Q 025672 243 LASDAG 248 (249)
Q Consensus 243 l~s~~a 248 (249)
|+++.+
T Consensus 231 l~~~~~ 236 (258)
T PRK08628 231 LLSERS 236 (258)
T ss_pred HhChhh
Confidence 998764
|
|
| >PRK05599 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-39 Score=261.77 Aligned_cols=213 Identities=18% Similarity=0.145 Sum_probs=185.0
Q ss_pred cEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCC-CeeEEEccCCCHHHHHHHHHHHHHHhCCcc
Q 025672 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGI-PAIGLEGDVRKREDAVRVVESTINHFGKLD 91 (249)
Q Consensus 13 k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 91 (249)
|+++||||++|||+++|++|+ +|++|++++|+.++++++.+++...+. .+.+++||++|+++++++++++.+.++++|
T Consensus 1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id 79 (246)
T PRK05599 1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEIS 79 (246)
T ss_pred CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCCC
Confidence 579999999999999999999 599999999999999999888876654 488999999999999999999999999999
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhhHH
Q 025672 92 ILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSA 171 (249)
Q Consensus 92 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~~ 171 (249)
++|||+|.....++.+.+.+.+.+.+++|+.+++.+++.++|.|.++.. +|+||++||..+..+.++...|++
T Consensus 80 ~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~-------~g~Iv~isS~~~~~~~~~~~~Y~a 152 (246)
T PRK05599 80 LAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTA-------PAAIVAFSSIAGWRARRANYVYGS 152 (246)
T ss_pred EEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCC-------CCEEEEEeccccccCCcCCcchhh
Confidence 9999999865555556777788899999999999999999999976531 388999999999988888999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhccCC
Q 025672 172 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247 (249)
Q Consensus 172 sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~ 247 (249)
+|+|+.+|+++++.|++ ++||+||+|+||+++|++.... . +.....+|||+|+.++++++..
T Consensus 153 sKaa~~~~~~~la~el~-~~~I~v~~v~PG~v~T~~~~~~-~------------~~~~~~~pe~~a~~~~~~~~~~ 214 (246)
T PRK05599 153 TKAGLDAFCQGLADSLH-GSHVRLIIARPGFVIGSMTTGM-K------------PAPMSVYPRDVAAAVVSAITSS 214 (246)
T ss_pred HHHHHHHHHHHHHHHhc-CCCceEEEecCCcccchhhcCC-C------------CCCCCCCHHHHHHHHHHHHhcC
Confidence 99999999999999998 8899999999999998753211 1 1111368999999999998753
|
|
| >PRK08213 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-38 Score=259.78 Aligned_cols=234 Identities=35% Similarity=0.496 Sum_probs=201.5
Q ss_pred CCCCCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHH
Q 025672 4 PFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVEST 83 (249)
Q Consensus 4 ~~~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 83 (249)
-..-.++++|++|||||+++||.+++++|+++|++|++++|+.++++...+++...+.++.+++||++|+++++++++++
T Consensus 4 ~~~~~~~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~ 83 (259)
T PRK08213 4 VLELFDLSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEET 83 (259)
T ss_pred chhhhCcCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHH
Confidence 33445688999999999999999999999999999999999998888888888766778889999999999999999999
Q ss_pred HHHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHH-HHhcCCCCCCCCCCceEEEecccccccc
Q 025672 84 INHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKY-LKKGGRGQASSSSGGIIINISATLHYTA 162 (249)
Q Consensus 84 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~~~~~~~~~g~iv~iss~~~~~~ 162 (249)
.+.++++|++|||+|.....+..+.+.++|++.+++|+.+++.+++++.+. +.+++ .++||++||..+..+
T Consensus 84 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~--------~~~~v~~sS~~~~~~ 155 (259)
T PRK08213 84 LERFGHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRG--------YGRIINVASVAGLGG 155 (259)
T ss_pred HHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcC--------CeEEEEECChhhccC
Confidence 999999999999999866666777888999999999999999999999998 65543 278999999877665
Q ss_pred Ccc----chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHH
Q 025672 163 TWY----QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAM 238 (249)
Q Consensus 163 ~~~----~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~ 238 (249)
.++ ...|+++|++++++++++++++. ++||+++.|+||+++|+..... .+...+.+....|..++++++|++.
T Consensus 156 ~~~~~~~~~~Y~~sKa~~~~~~~~~a~~~~-~~gi~v~~v~Pg~~~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~~va~ 232 (259)
T PRK08213 156 NPPEVMDTIAYNTSKGAVINFTRALAAEWG-PHGIRVNAIAPGFFPTKMTRGT--LERLGEDLLAHTPLGRLGDDEDLKG 232 (259)
T ss_pred CCccccCcchHHHHHHHHHHHHHHHHHHhc-ccCEEEEEEecCcCCCcchhhh--hHHHHHHHHhcCCCCCCcCHHHHHH
Confidence 543 48899999999999999999998 8899999999999997653322 2233444566778888999999999
Q ss_pred HHHHhccCCC
Q 025672 239 AALYLASDAG 248 (249)
Q Consensus 239 ~v~~l~s~~a 248 (249)
++.||+++.+
T Consensus 233 ~~~~l~~~~~ 242 (259)
T PRK08213 233 AALLLASDAS 242 (259)
T ss_pred HHHHHhCccc
Confidence 9999998865
|
|
| >PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-38 Score=259.42 Aligned_cols=224 Identities=23% Similarity=0.327 Sum_probs=194.5
Q ss_pred CCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHH
Q 025672 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (249)
Q Consensus 7 ~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 86 (249)
.+++++|++||||++++||++++++|+++|++|++++|+. +...+.++.++++|++|+++++++++++.+.
T Consensus 3 ~~~~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~---------~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 73 (252)
T PRK08220 3 AMDFSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF---------LTQEDYPFATFVLDVSDAAAVAQVCQRLLAE 73 (252)
T ss_pred ccCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch---------hhhcCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence 3668899999999999999999999999999999999976 1223557889999999999999999999999
Q ss_pred hCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccc
Q 025672 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ 166 (249)
Q Consensus 87 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~ 166 (249)
++++|++|||+|.....++.+.+.+++...+++|+.+++.+++++.+.|.++.. ++||++||..+..+.++.
T Consensus 74 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--------g~iv~~ss~~~~~~~~~~ 145 (252)
T PRK08220 74 TGPLDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRS--------GAIVTVGSNAAHVPRIGM 145 (252)
T ss_pred cCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCC--------CEEEEECCchhccCCCCC
Confidence 999999999999877777888899999999999999999999999999987653 889999999888888888
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChH--------HHHHhhhhhhcccCCCCHHHHHH
Q 025672 167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPE--------EIRSKATDYMAAYKFGEKWDIAM 238 (249)
Q Consensus 167 ~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~dva~ 238 (249)
..|+++|+++.++++++++|++ ++||+||.|.||+++|+........+ ...+.+....|++++.+|+|+|+
T Consensus 146 ~~Y~~sK~a~~~~~~~la~e~~-~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~ 224 (252)
T PRK08220 146 AAYGASKAALTSLAKCVGLELA-PYGVRCNVVSPGSTDTDMQRTLWVDEDGEQQVIAGFPEQFKLGIPLGKIARPQEIAN 224 (252)
T ss_pred chhHHHHHHHHHHHHHHHHHhh-HhCeEEEEEecCcCcchhhhhhccchhhhhhhhhhHHHHHhhcCCCcccCCHHHHHH
Confidence 9999999999999999999998 88999999999999987643221111 11233445568889999999999
Q ss_pred HHHHhccCCC
Q 025672 239 AALYLASDAG 248 (249)
Q Consensus 239 ~v~~l~s~~a 248 (249)
+++||+++.+
T Consensus 225 ~~~~l~~~~~ 234 (252)
T PRK08220 225 AVLFLASDLA 234 (252)
T ss_pred HHHHHhcchh
Confidence 9999998764
|
|
| >TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-38 Score=257.88 Aligned_cols=230 Identities=26% Similarity=0.381 Sum_probs=204.7
Q ss_pred CCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCC
Q 025672 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK 89 (249)
Q Consensus 10 l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 89 (249)
+++|++|||||+++||++++++|+++|++|++++|+.+..+++.+++...+.++.++++|++|.++++++++.+.+.+++
T Consensus 1 ~~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 80 (250)
T TIGR03206 1 LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGP 80 (250)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 46899999999999999999999999999999999998888888877766778999999999999999999999999999
Q ss_pred ccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhh
Q 025672 90 LDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHV 169 (249)
Q Consensus 90 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y 169 (249)
+|++|||+|.....++.+.+.++++..+++|+.+++.+++++.+.|.+.+. ++||++||..+..+.++...|
T Consensus 81 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--------~~ii~iss~~~~~~~~~~~~Y 152 (250)
T TIGR03206 81 VDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGA--------GRIVNIASDAARVGSSGEAVY 152 (250)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC--------eEEEEECchhhccCCCCCchH
Confidence 999999999876677778888999999999999999999999999976543 789999999998888889999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCC----CChHHHHHhhhhhhcccCCCCHHHHHHHHHHhcc
Q 025672 170 SAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK----LAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245 (249)
Q Consensus 170 ~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s 245 (249)
+.+|+++.+++++++.++. +.||+++.|+||+++|++.... ..++.....+....|.+++.+++|+|+++.||++
T Consensus 153 ~~sK~a~~~~~~~la~~~~-~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~ 231 (250)
T TIGR03206 153 AACKGGLVAFSKTMAREHA-RHGITVNVVCPGPTDTALLDDICGGAENPEKLREAFTRAIPLGRLGQPDDLPGAILFFSS 231 (250)
T ss_pred HHHHHHHHHHHHHHHHHHh-HhCcEEEEEecCcccchhHHhhhhccCChHHHHHHHHhcCCccCCcCHHHHHHHHHHHcC
Confidence 9999999999999999997 7899999999999998754321 2234455566777888999999999999999998
Q ss_pred CCC
Q 025672 246 DAG 248 (249)
Q Consensus 246 ~~a 248 (249)
+.+
T Consensus 232 ~~~ 234 (250)
T TIGR03206 232 DDA 234 (250)
T ss_pred ccc
Confidence 864
|
Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. |
| >TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-38 Score=256.70 Aligned_cols=222 Identities=27% Similarity=0.287 Sum_probs=192.5
Q ss_pred EEEecCCCchhHHHHHHHHHcCCeEEEEeCC-cchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCccEE
Q 025672 15 ALLTGGGSGIGFEISLQLGKHGAAIAIMGRR-KTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDIL 93 (249)
Q Consensus 15 ~lItGa~~giG~~~a~~l~~~G~~v~l~~r~-~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~v 93 (249)
++||||++|||++++++|+++|++|++++|+ .+..+...+++...+.++.++++|++|+++++++++++.+.++++|++
T Consensus 1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~~l 80 (239)
T TIGR01831 1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAYYGV 80 (239)
T ss_pred CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 5899999999999999999999999988865 455677777777667789999999999999999999999999999999
Q ss_pred EEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHH-HHHHhcCCCCCCCCCCceEEEeccccccccCccchhhHHH
Q 025672 94 VNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEAL-KYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAA 172 (249)
Q Consensus 94 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~-~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~~s 172 (249)
|||+|.....++.+.+.++|+.++++|+.++++++++++ |.+.++. .++||++||..+..+.++...|+++
T Consensus 81 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--------~~~iv~vsS~~~~~~~~~~~~Y~~s 152 (239)
T TIGR01831 81 VLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQ--------GGRIITLASVSGVMGNRGQVNYSAA 152 (239)
T ss_pred EECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcC--------CeEEEEEcchhhccCCCCCcchHHH
Confidence 999998777777788999999999999999999999876 4444333 3789999999999998999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhccCCC
Q 025672 173 KAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAG 248 (249)
Q Consensus 173 K~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~a 248 (249)
|+++.+++++++.|+. ++||++++|+||+++|++.... ++ ..+......|++|+.+|+|+++++.||+++++
T Consensus 153 K~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~~--~~-~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~ 224 (239)
T TIGR01831 153 KAGLIGATKALAVELA-KRKITVNCIAPGLIDTEMLAEV--EH-DLDEALKTVPMNRMGQPAEVASLAGFLMSDGA 224 (239)
T ss_pred HHHHHHHHHHHHHHHh-HhCeEEEEEEEccCccccchhh--hH-HHHHHHhcCCCCCCCCHHHHHHHHHHHcCchh
Confidence 9999999999999998 8899999999999998765432 22 22334556789999999999999999999865
|
This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found. |
| >PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-38 Score=256.33 Aligned_cols=231 Identities=30% Similarity=0.405 Sum_probs=202.0
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
+++++++++||||+++||.+++++|+++|++|++++|+.++.+.+..++.. +.++.++++|++|+++++++++++.+.+
T Consensus 1 ~~~~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 79 (251)
T PRK07231 1 MRLEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILA-GGRAIAVAADVSDEADVEAAVAAALERF 79 (251)
T ss_pred CCcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc-CCeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence 357899999999999999999999999999999999999888877777754 5678999999999999999999998999
Q ss_pred CCccEEEEcCCCCC-CCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccc
Q 025672 88 GKLDILVNAAAGNF-LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ 166 (249)
Q Consensus 88 ~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~ 166 (249)
+++|+||||+|... ..++.+.+.+++++.+++|+.+++.+++.+++.|.++.. ++||++||..+..+.++.
T Consensus 80 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--------~~iv~~sS~~~~~~~~~~ 151 (251)
T PRK07231 80 GSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGG--------GAIVNVASTAGLRPRPGL 151 (251)
T ss_pred CCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCC--------cEEEEEcChhhcCCCCCc
Confidence 99999999999754 456778899999999999999999999999999987543 889999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCC--hHHHHHhhhhhhcccCCCCHHHHHHHHHHhc
Q 025672 167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA--PEEIRSKATDYMAAYKFGEKWDIAMAALYLA 244 (249)
Q Consensus 167 ~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~ 244 (249)
..|+.+|++++.+++.++.+++ +.||++++|+||++.|++...... .++....+....|.+++.+|+|+++++++|+
T Consensus 152 ~~y~~sk~~~~~~~~~~a~~~~-~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~ 230 (251)
T PRK07231 152 GWYNASKGAVITLTKALAAELG-PDKIRVNAVAPVVVETGLLEAFMGEPTPENRAKFLATIPLGRLGTPEDIANAALFLA 230 (251)
T ss_pred hHHHHHHHHHHHHHHHHHHHhh-hhCeEEEEEEECccCCCcchhhhcccChHHHHHHhcCCCCCCCcCHHHHHHHHHHHh
Confidence 9999999999999999999998 789999999999999875433222 1234445566678888999999999999999
Q ss_pred cCCC
Q 025672 245 SDAG 248 (249)
Q Consensus 245 s~~a 248 (249)
++.+
T Consensus 231 ~~~~ 234 (251)
T PRK07231 231 SDEA 234 (251)
T ss_pred Cccc
Confidence 8753
|
|
| >PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-38 Score=264.80 Aligned_cols=232 Identities=24% Similarity=0.347 Sum_probs=192.0
Q ss_pred CCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCc-chHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHH
Q 025672 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK-TVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN 85 (249)
Q Consensus 7 ~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 85 (249)
..++++|+++||||++|||++++++|+++|++|++.+++. +..+++.+++...+.++.++.+|++|+++++++++++.+
T Consensus 7 ~~~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~ 86 (306)
T PRK07792 7 TTDLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVG 86 (306)
T ss_pred CcCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHH
Confidence 4568999999999999999999999999999999998854 456777888877778899999999999999999999988
Q ss_pred HhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCcc
Q 025672 86 HFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY 165 (249)
Q Consensus 86 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~ 165 (249)
++++|++|||||+.....+.+.+.++|+..+++|+.+++++++++.++|.++.... .....|+||++||..+..+.++
T Consensus 87 -~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~-~~~~~g~iv~isS~~~~~~~~~ 164 (306)
T PRK07792 87 -LGGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAA-GGPVYGRIVNTSSEAGLVGPVG 164 (306)
T ss_pred -hCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhccc-CCCCCcEEEEECCcccccCCCC
Confidence 99999999999988777778889999999999999999999999999997532110 0111378999999999888888
Q ss_pred chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCCh-HHHHHhhhhhhcccCCCCHHHHHHHHHHhc
Q 025672 166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP-EEIRSKATDYMAAYKFGEKWDIAMAALYLA 244 (249)
Q Consensus 166 ~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~dva~~v~~l~ 244 (249)
...|+++|+++.+|++.++.|+. ++||+||+|+||. .|++....... ++.. . ......+|+|++.++.||+
T Consensus 165 ~~~Y~asKaal~~l~~~la~e~~-~~gI~vn~i~Pg~-~t~~~~~~~~~~~~~~---~---~~~~~~~pe~va~~v~~L~ 236 (306)
T PRK07792 165 QANYGAAKAGITALTLSAARALG-RYGVRANAICPRA-RTAMTADVFGDAPDVE---A---GGIDPLSPEHVVPLVQFLA 236 (306)
T ss_pred CchHHHHHHHHHHHHHHHHHHhh-hcCeEEEEECCCC-CCchhhhhccccchhh---h---hccCCCCHHHHHHHHHHHc
Confidence 99999999999999999999998 8999999999995 56543221111 1110 0 1122458999999999999
Q ss_pred cCCC
Q 025672 245 SDAG 248 (249)
Q Consensus 245 s~~a 248 (249)
++++
T Consensus 237 s~~~ 240 (306)
T PRK07792 237 SPAA 240 (306)
T ss_pred Cccc
Confidence 9865
|
|
| >PRK12939 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-38 Score=255.42 Aligned_cols=230 Identities=31% Similarity=0.355 Sum_probs=204.0
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhC
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 88 (249)
++++|+++|||++++||++++++|+++|++|++++|+.++++...+++...+.++.++.+|++|+++++++++++.+.++
T Consensus 4 ~~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 83 (250)
T PRK12939 4 NLAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAALG 83 (250)
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 46789999999999999999999999999999999999888888888876677899999999999999999999999999
Q ss_pred CccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchh
Q 025672 89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH 168 (249)
Q Consensus 89 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~ 168 (249)
++|+||||+|.....++.+.+.+++++.+++|+.+++.+++++.+.|.+++. |++|++||..+..+.+....
T Consensus 84 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--------g~iv~isS~~~~~~~~~~~~ 155 (250)
T PRK12939 84 GLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGR--------GRIVNLASDTALWGAPKLGA 155 (250)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCC--------eEEEEECchhhccCCCCcch
Confidence 9999999999877777788899999999999999999999999999977543 88999999998888888899
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhccCCC
Q 025672 169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAG 248 (249)
Q Consensus 169 y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~a 248 (249)
|+++|++++++++.++.++. +++|+++.|+||+++|+..... ....+...+....+..++.+++|+++++.+++++.+
T Consensus 156 y~~sK~~~~~~~~~l~~~~~-~~~i~v~~v~pg~v~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~ 233 (250)
T PRK12939 156 YVASKGAVIGMTRSLARELG-GRGITVNAIAPGLTATEATAYV-PADERHAYYLKGRALERLQVPDDVAGAVLFLLSDAA 233 (250)
T ss_pred HHHHHHHHHHHHHHHHHHHh-hhCEEEEEEEECCCCCcccccc-CChHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCccc
Confidence 99999999999999999998 8899999999999998764332 222344445566778889999999999999998653
|
|
| >PRK12744 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-38 Score=259.26 Aligned_cols=228 Identities=23% Similarity=0.366 Sum_probs=184.5
Q ss_pred CCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCc----chHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHH
Q 025672 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK----TVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVES 82 (249)
Q Consensus 7 ~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~----~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~ 82 (249)
.+.+++|+++||||++|||++++++|+++|++|++++++. +..+...+++...+.++.++++|++|++++++++++
T Consensus 3 ~~~l~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~ 82 (257)
T PRK12744 3 DHSLKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDD 82 (257)
T ss_pred CCCCCCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHH
Confidence 4567899999999999999999999999999977766532 334555566655566889999999999999999999
Q ss_pred HHHHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEe-ccccccc
Q 025672 83 TINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINI-SATLHYT 161 (249)
Q Consensus 83 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~i-ss~~~~~ 161 (249)
+.+.++++|++|||||.....++.+.+.+++++.+++|+.+++.+++++.|.|.+. ++++++ ||..+ .
T Consensus 83 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~----------~~iv~~~ss~~~-~ 151 (257)
T PRK12744 83 AKAAFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDN----------GKIVTLVTSLLG-A 151 (257)
T ss_pred HHHhhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccC----------CCEEEEecchhc-c
Confidence 99999999999999998777778888999999999999999999999999998643 567776 44433 3
Q ss_pred cCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHH--Hhhhhhhccc--CCCCHHHHH
Q 025672 162 ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIR--SKATDYMAAY--KFGEKWDIA 237 (249)
Q Consensus 162 ~~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~--~~~~~~~~~~--~~~~~~dva 237 (249)
+.+....|+++|+|+++|+++++.|+. ++||+|++|+||++.|+.......++... +......++. ++.+|+|++
T Consensus 152 ~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva 230 (257)
T PRK12744 152 FTPFYSAYAGSKAPVEHFTRAASKEFG-ARGISVTAVGPGPMDTPFFYPQEGAEAVAYHKTAAALSPFSKTGLTDIEDIV 230 (257)
T ss_pred cCCCcccchhhHHHHHHHHHHHHHHhC-cCceEEEEEecCccccchhccccccchhhcccccccccccccCCCCCHHHHH
Confidence 456678999999999999999999998 88999999999999987543322222111 1111223333 788999999
Q ss_pred HHHHHhccC
Q 025672 238 MAALYLASD 246 (249)
Q Consensus 238 ~~v~~l~s~ 246 (249)
+++.||+++
T Consensus 231 ~~~~~l~~~ 239 (257)
T PRK12744 231 PFIRFLVTD 239 (257)
T ss_pred HHHHHhhcc
Confidence 999999986
|
|
| >PRK06138 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-38 Score=255.33 Aligned_cols=230 Identities=30% Similarity=0.433 Sum_probs=199.9
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
|++++|+++||||+++||++++++|+++|++|++++|+.+..+...+++. .+.++.++++|++|+++++++++++.+.+
T Consensus 1 m~~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~i~~~~ 79 (252)
T PRK06138 1 MRLAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIA-AGGRAFARQGDVGSAEAVEALVDFVAARW 79 (252)
T ss_pred CCCCCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHh-cCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 45789999999999999999999999999999999999888777777665 45678999999999999999999999999
Q ss_pred CCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch
Q 025672 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 167 (249)
Q Consensus 88 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~ 167 (249)
+++|+||||+|.....++.+.+.+++++.+++|+.+++.+++.+++.|.+.+. ++|+++||..+..+.++..
T Consensus 80 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--------~~ii~~sS~~~~~~~~~~~ 151 (252)
T PRK06138 80 GRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGG--------GSIVNTASQLALAGGRGRA 151 (252)
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCC--------eEEEEECChhhccCCCCcc
Confidence 99999999999877777778889999999999999999999999999987653 7899999999888888899
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCC----ChHHHHHhhhhhhcccCCCCHHHHHHHHHHh
Q 025672 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL----APEEIRSKATDYMAAYKFGEKWDIAMAALYL 243 (249)
Q Consensus 168 ~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l 243 (249)
.|+.+|+++..++++++.|+. .+||++++|+||+++|+...... .++..........+..++.+++|+++++.++
T Consensus 152 ~Y~~sK~a~~~~~~~l~~~~~-~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l 230 (252)
T PRK06138 152 AYVASKGAIASLTRAMALDHA-TDGIRVNAVAPGTIDTPYFRRIFARHADPEALREALRARHPMNRFGTAEEVAQAALFL 230 (252)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-hcCeEEEEEEECCccCcchhhhhccccChHHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence 999999999999999999998 88999999999999877543221 1233333333445666789999999999999
Q ss_pred ccCC
Q 025672 244 ASDA 247 (249)
Q Consensus 244 ~s~~ 247 (249)
+++.
T Consensus 231 ~~~~ 234 (252)
T PRK06138 231 ASDE 234 (252)
T ss_pred cCch
Confidence 9875
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-38 Score=282.47 Aligned_cols=229 Identities=28% Similarity=0.394 Sum_probs=197.4
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhC
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 88 (249)
..++|+++|||+++|||++++++|+++|++|++++|+.++++++.+++ +.++.++++|++|+++++++++++.+.++
T Consensus 2 ~~~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 78 (520)
T PRK06484 2 KAQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSL---GPDHHALAMDVSDEAQIREGFEQLHREFG 78 (520)
T ss_pred CCCCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCceeEEEeccCCHHHHHHHHHHHHHHhC
Confidence 457999999999999999999999999999999999988877766665 45678899999999999999999999999
Q ss_pred CccEEEEcCCCCC--CCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccc
Q 025672 89 KLDILVNAAAGNF--LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ 166 (249)
Q Consensus 89 ~id~vi~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~ 166 (249)
++|++|||||+.. ..++.+.+.++|++.+++|+.+++.++++++|.|.+++. +++||++||..+..+.+..
T Consensus 79 ~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-------g~~iv~isS~~~~~~~~~~ 151 (520)
T PRK06484 79 RIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGH-------GAAIVNVASGAGLVALPKR 151 (520)
T ss_pred CCCEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC-------CCeEEEECCcccCCCCCCC
Confidence 9999999999743 356778899999999999999999999999999976543 2489999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHH-HHHhhhhhhcccCCCCHHHHHHHHHHhcc
Q 025672 167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEE-IRSKATDYMAAYKFGEKWDIAMAALYLAS 245 (249)
Q Consensus 167 ~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~dva~~v~~l~s 245 (249)
..|+++|+++.+|+++++.|+. +.||+|++|+||+++|++......... ..+......|.+++.+|+|+++++.||++
T Consensus 152 ~~Y~asKaal~~l~~~la~e~~-~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~v~~l~~ 230 (520)
T PRK06484 152 TAYSASKAAVISLTRSLACEWA-AKGIRVNAVLPGYVRTQMVAELERAGKLDPSAVRSRIPLGRLGRPEEIAEAVFFLAS 230 (520)
T ss_pred chHHHHHHHHHHHHHHHHHHhh-hhCeEEEEEccCCcCchhhhhhcccchhhhHHHHhcCCCCCCcCHHHHHHHHHHHhC
Confidence 9999999999999999999998 889999999999999876433221111 12233455677888999999999999998
Q ss_pred CCC
Q 025672 246 DAG 248 (249)
Q Consensus 246 ~~a 248 (249)
+.+
T Consensus 231 ~~~ 233 (520)
T PRK06484 231 DQA 233 (520)
T ss_pred ccc
Confidence 754
|
|
| >PRK06182 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-38 Score=258.80 Aligned_cols=221 Identities=26% Similarity=0.264 Sum_probs=190.0
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCc
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 90 (249)
++|+++|||++||||++++++|+++|++|++++|+.++++++. . ..+.++++|++|+++++++++++.+.++++
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~----~--~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~i 75 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLA----S--LGVHPLSLDVTDEASIKAAVDTIIAEEGRI 75 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----h--CCCeEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence 5799999999999999999999999999999999987665433 1 247889999999999999999999999999
Q ss_pred cEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhhH
Q 025672 91 DILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVS 170 (249)
Q Consensus 91 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~ 170 (249)
|++|||||.....++.+.+.++++..+++|+.+++.+++.++|.|.+++. |+||++||..+..+.+....|+
T Consensus 76 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~--------g~iv~isS~~~~~~~~~~~~Y~ 147 (273)
T PRK06182 76 DVLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRS--------GRIINISSMGGKIYTPLGAWYH 147 (273)
T ss_pred CEEEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCC--------CEEEEEcchhhcCCCCCccHhH
Confidence 99999999987788888999999999999999999999999999987653 8899999998887777788899
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCC----------ChH----HHHHhhhhhhcccCCCCHHHH
Q 025672 171 AAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL----------APE----EIRSKATDYMAAYKFGEKWDI 236 (249)
Q Consensus 171 ~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~----------~~~----~~~~~~~~~~~~~~~~~~~dv 236 (249)
++|+++++|+++++.|+. ++||++++|+||+++|++..... ... ...+.+....+.+++.+|+|+
T Consensus 148 ~sKaa~~~~~~~l~~e~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 226 (273)
T PRK06182 148 ATKFALEGFSDALRLEVA-PFGIDVVVIEPGGIKTEWGDIAADHLLKTSGNGAYAEQAQAVAASMRSTYGSGRLSDPSVI 226 (273)
T ss_pred HHHHHHHHHHHHHHHHhc-ccCCEEEEEecCCcccccchhhhhhhcccccccchHHHHHHHHHHHHHhhccccCCCHHHH
Confidence 999999999999999998 88999999999999987532110 001 122234444567789999999
Q ss_pred HHHHHHhccC
Q 025672 237 AMAALYLASD 246 (249)
Q Consensus 237 a~~v~~l~s~ 246 (249)
|++++++++.
T Consensus 227 A~~i~~~~~~ 236 (273)
T PRK06182 227 ADAISKAVTA 236 (273)
T ss_pred HHHHHHHHhC
Confidence 9999999974
|
|
| >PRK12935 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-37 Score=253.56 Aligned_cols=227 Identities=36% Similarity=0.510 Sum_probs=196.9
Q ss_pred CCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeC-CcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhC
Q 025672 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGR-RKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (249)
Q Consensus 10 l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r-~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 88 (249)
+++|+++||||++|||.+++++|+++|++|+++.+ +.+..++..+++...+.++.++++|++|+++++++++++.+.++
T Consensus 4 ~~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 83 (247)
T PRK12935 4 LNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHFG 83 (247)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 67999999999999999999999999999987654 45666677777766667899999999999999999999999999
Q ss_pred CccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchh
Q 025672 89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH 168 (249)
Q Consensus 89 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~ 168 (249)
++|+||||||......+.+.+.+++++.+++|+.+++.++++++|.|.+... ++||++||..+..+.++...
T Consensus 84 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--------~~iv~~sS~~~~~~~~~~~~ 155 (247)
T PRK12935 84 KVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEE--------GRIISISSIIGQAGGFGQTN 155 (247)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCC--------cEEEEEcchhhcCCCCCCcc
Confidence 9999999999877667778888999999999999999999999999976543 78999999988888888899
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhccCC
Q 025672 169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247 (249)
Q Consensus 169 y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~ 247 (249)
|+++|+++++++++++.|+. +.||+++.|+||+++|+.... . ++..........+.+++.+|||++++++|++++.
T Consensus 156 Y~~sK~a~~~~~~~l~~~~~-~~~i~v~~v~pg~v~t~~~~~-~-~~~~~~~~~~~~~~~~~~~~edva~~~~~~~~~~ 231 (247)
T PRK12935 156 YSAAKAGMLGFTKSLALELA-KTNVTVNAICPGFIDTEMVAE-V-PEEVRQKIVAKIPKKRFGQADEIAKGVVYLCRDG 231 (247)
T ss_pred hHHHHHHHHHHHHHHHHHHH-HcCcEEEEEEeCCCcChhhhh-c-cHHHHHHHHHhCCCCCCcCHHHHHHHHHHHcCcc
Confidence 99999999999999999997 889999999999999765432 2 2333344555667778999999999999999753
|
|
| >PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-37 Score=253.01 Aligned_cols=226 Identities=27% Similarity=0.332 Sum_probs=196.0
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhC
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 88 (249)
++++|+++||||+++||++++++|+++|+.|++.+|+.++++++...+ +.++.++.+|+++.++++++++++.+.++
T Consensus 3 ~~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 79 (245)
T PRK12936 3 DLSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAEL---GERVKIFPANLSDRDEVKALGQKAEADLE 79 (245)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh---CCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 467999999999999999999999999999999999887777665544 45688999999999999999999999999
Q ss_pred CccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchh
Q 025672 89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH 168 (249)
Q Consensus 89 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~ 168 (249)
++|++|||+|.....++.+.+.++|+..+++|+.+++++++++.+.+.++.. ++||++||..+..+.+....
T Consensus 80 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--------~~iv~~sS~~~~~~~~~~~~ 151 (245)
T PRK12936 80 GVDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRY--------GRIINITSVVGVTGNPGQAN 151 (245)
T ss_pred CCCEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCC--------CEEEEECCHHhCcCCCCCcc
Confidence 9999999999877677778888999999999999999999999998866543 78999999988888888999
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhccCCC
Q 025672 169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAG 248 (249)
Q Consensus 169 y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~a 248 (249)
|+.+|+++.++++.++.++. +.||++++|+||+++|+.... . .+...+......|..|+.+|+|+++++.||+++.+
T Consensus 152 Y~~sk~a~~~~~~~la~~~~-~~~i~v~~i~pg~~~t~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~~~~~ 228 (245)
T PRK12936 152 YCASKAGMIGFSKSLAQEIA-TRNVTVNCVAPGFIESAMTGK-L-NDKQKEAIMGAIPMKRMGTGAEVASAVAYLASSEA 228 (245)
T ss_pred hHHHHHHHHHHHHHHHHHhh-HhCeEEEEEEECcCcCchhcc-c-ChHHHHHHhcCCCCCCCcCHHHHHHHHHHHcCccc
Confidence 99999999999999999998 889999999999998764432 2 22223334456788889999999999999998753
|
|
| >PRK06123 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-37 Score=252.25 Aligned_cols=230 Identities=27% Similarity=0.361 Sum_probs=194.0
Q ss_pred CcEEEEecCCCchhHHHHHHHHHcCCeEEEEeC-CcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCc
Q 025672 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGR-RKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (249)
Q Consensus 12 ~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r-~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 90 (249)
+|++|||||+++||.+++++|+++|++|+++++ +++..+...+++...+.++.+++||++|.++++++++++.+.++++
T Consensus 2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 81 (248)
T PRK06123 2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRELGRL 81 (248)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence 579999999999999999999999999988874 4455666666676666778899999999999999999999999999
Q ss_pred cEEEEcCCCCCC-CCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCcc-chh
Q 025672 91 DILVNAAAGNFL-VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY-QIH 168 (249)
Q Consensus 91 d~vi~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~-~~~ 168 (249)
|+||||+|.... .++.+.+.++|+..+++|+.+++.+++++++.|.++..+. +|+||++||..+..+.++ ...
T Consensus 82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~-----~g~iv~~sS~~~~~~~~~~~~~ 156 (248)
T PRK06123 82 DALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGR-----GGAIVNVSSMAARLGSPGEYID 156 (248)
T ss_pred CEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCC-----CeEEEEECchhhcCCCCCCccc
Confidence 999999998653 4677788999999999999999999999999997542111 278999999988877765 367
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhccCCC
Q 025672 169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAG 248 (249)
Q Consensus 169 y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~a 248 (249)
|+++|+++++|+++++.|+. ++||+++.|+||++.|++..... .+..........|+++..+++|+++++.||+++.+
T Consensus 157 Y~~sKaa~~~~~~~la~~~~-~~~i~v~~i~pg~v~~~~~~~~~-~~~~~~~~~~~~p~~~~~~~~d~a~~~~~l~~~~~ 234 (248)
T PRK06123 157 YAASKGAIDTMTIGLAKEVA-AEGIRVNAVRPGVIYTEIHASGG-EPGRVDRVKAGIPMGRGGTAEEVARAILWLLSDEA 234 (248)
T ss_pred hHHHHHHHHHHHHHHHHHhc-ccCeEEEEEecCcccCchhhccC-CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccc
Confidence 99999999999999999998 88999999999999987543322 23344456666788899999999999999998753
|
|
| >PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-38 Score=253.47 Aligned_cols=216 Identities=25% Similarity=0.320 Sum_probs=184.5
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhC
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 88 (249)
.+++|+++|||+++|||++++++|+++|++|++++|+.... ...++.++.+|++++ ++++.+.++
T Consensus 2 ~l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~---------~~~~~~~~~~D~~~~------~~~~~~~~~ 66 (235)
T PRK06550 2 EFMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPD---------LSGNFHFLQLDLSDD------LEPLFDWVP 66 (235)
T ss_pred CCCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcccc---------cCCcEEEEECChHHH------HHHHHHhhC
Confidence 47899999999999999999999999999999999975431 124688999999987 444455668
Q ss_pred CccEEEEcCCCCC-CCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch
Q 025672 89 KLDILVNAAAGNF-LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 167 (249)
Q Consensus 89 ~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~ 167 (249)
++|++|||+|... ..++.+.+.+++++.+++|+.++++++++++|.+.+++. ++||++||..+..+.++..
T Consensus 67 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--------~~iv~~sS~~~~~~~~~~~ 138 (235)
T PRK06550 67 SVDILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKS--------GIIINMCSIASFVAGGGGA 138 (235)
T ss_pred CCCEEEECCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC--------cEEEEEcChhhccCCCCCc
Confidence 9999999999764 356778889999999999999999999999999977653 8899999999988888889
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhccCC
Q 025672 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247 (249)
Q Consensus 168 ~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~ 247 (249)
.|+++|+++.+++++++.|+. ++||++|+|+||+++|+.......++...+......|.+++.+|+|+|++++||+++.
T Consensus 139 ~Y~~sK~a~~~~~~~la~~~~-~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~ 217 (235)
T PRK06550 139 AYTASKHALAGFTKQLALDYA-KDGIQVFGIAPGAVKTPMTAADFEPGGLADWVARETPIKRWAEPEEVAELTLFLASGK 217 (235)
T ss_pred ccHHHHHHHHHHHHHHHHHhh-hcCeEEEEEeeCCccCcccccccCchHHHHHHhccCCcCCCCCHHHHHHHHHHHcChh
Confidence 999999999999999999998 8899999999999998865444334444455566778999999999999999999886
Q ss_pred C
Q 025672 248 G 248 (249)
Q Consensus 248 a 248 (249)
+
T Consensus 218 ~ 218 (235)
T PRK06550 218 A 218 (235)
T ss_pred h
Confidence 4
|
|
| >PRK07825 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-37 Score=257.19 Aligned_cols=216 Identities=23% Similarity=0.265 Sum_probs=190.4
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
+.+++++++||||+||||++++++|+++|++|++++|+.+.++++.+++. ++.++.+|++|+++++++++++.+.+
T Consensus 1 ~~~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~----~~~~~~~D~~~~~~~~~~~~~~~~~~ 76 (273)
T PRK07825 1 DDLRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELG----LVVGGPLDVTDPASFAAFLDAVEADL 76 (273)
T ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc----cceEEEccCCCHHHHHHHHHHHHHHc
Confidence 35678999999999999999999999999999999999888877766653 57889999999999999999999999
Q ss_pred CCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch
Q 025672 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 167 (249)
Q Consensus 88 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~ 167 (249)
+++|++|||+|.....++.+.+.+++++++++|+.+++.+++.++|.|.+++. |+||++||..+..+.++..
T Consensus 77 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~--------g~iv~isS~~~~~~~~~~~ 148 (273)
T PRK07825 77 GPIDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGR--------GHVVNVASLAGKIPVPGMA 148 (273)
T ss_pred CCCCEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC--------CEEEEEcCccccCCCCCCc
Confidence 99999999999987778888899999999999999999999999999987654 8899999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhccCC
Q 025672 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247 (249)
Q Consensus 168 ~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~ 247 (249)
.|+++|+++.+|+++++.|+. +.||+++.|+||+++|++...... .....+.+++|+|+.+++++++.
T Consensus 149 ~Y~asKaa~~~~~~~l~~el~-~~gi~v~~v~Pg~v~t~~~~~~~~-----------~~~~~~~~~~~va~~~~~~l~~~ 216 (273)
T PRK07825 149 TYCASKHAVVGFTDAARLELR-GTGVHVSVVLPSFVNTELIAGTGG-----------AKGFKNVEPEDVAAAIVGTVAKP 216 (273)
T ss_pred chHHHHHHHHHHHHHHHHHhh-ccCcEEEEEeCCcCcchhhccccc-----------ccCCCCCCHHHHHHHHHHHHhCC
Confidence 999999999999999999998 889999999999999765332110 11224678999999999988653
|
|
| >PRK05875 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-37 Score=255.89 Aligned_cols=231 Identities=27% Similarity=0.398 Sum_probs=199.4
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhc--CCCeeEEEccCCCHHHHHHHHHHHHHH
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVESTINH 86 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 86 (249)
++++|++||||++++||++++++|+++|++|++++|+.++.+...+++... +.++.++.+|++|+++++++++++.+.
T Consensus 4 ~~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 83 (276)
T PRK05875 4 SFQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAW 83 (276)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 477899999999999999999999999999999999988877777776543 357889999999999999999999999
Q ss_pred hCCccEEEEcCCCCC-CCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCcc
Q 025672 87 FGKLDILVNAAAGNF-LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY 165 (249)
Q Consensus 87 ~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~ 165 (249)
++++|++|||+|... ..++.+.+.+++..++++|+.+++.+++++++.|.+... ++|+++||..+..+.++
T Consensus 84 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--------g~iv~~sS~~~~~~~~~ 155 (276)
T PRK05875 84 HGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGG--------GSFVGISSIAASNTHRW 155 (276)
T ss_pred cCCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC--------cEEEEEechhhcCCCCC
Confidence 999999999999753 356677888999999999999999999999999976543 78999999988888888
Q ss_pred chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhcc
Q 025672 166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245 (249)
Q Consensus 166 ~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s 245 (249)
...|+++|++++++++.++.++. ..||+++.|.||+++|++.......+..........|..++++++|+++++.||++
T Consensus 156 ~~~Y~~sK~a~~~~~~~~~~~~~-~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~ 234 (276)
T PRK05875 156 FGAYGVTKSAVDHLMKLAADELG-PSWVRVNSIRPGLIRTDLVAPITESPELSADYRACTPLPRVGEVEDVANLAMFLLS 234 (276)
T ss_pred CcchHHHHHHHHHHHHHHHHHhc-ccCeEEEEEecCccCCccccccccCHHHHHHHHcCCCCCCCcCHHHHHHHHHHHcC
Confidence 89999999999999999999998 88999999999999987654433333333344455677889999999999999998
Q ss_pred CCC
Q 025672 246 DAG 248 (249)
Q Consensus 246 ~~a 248 (249)
+.+
T Consensus 235 ~~~ 237 (276)
T PRK05875 235 DAA 237 (276)
T ss_pred chh
Confidence 753
|
|
| >PRK06198 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-37 Score=254.17 Aligned_cols=232 Identities=31% Similarity=0.401 Sum_probs=201.0
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCCe-EEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAA-IAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~-v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
++++|+++|||+++|||+.++++|+++|++ |++++|+.++.+...+++...+.++.++.+|++++++++++++.+.+.+
T Consensus 3 ~~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 82 (260)
T PRK06198 3 RLDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAF 82 (260)
T ss_pred CCCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 478999999999999999999999999998 9999999887777777776667788899999999999999999999999
Q ss_pred CCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch
Q 025672 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 167 (249)
Q Consensus 88 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~ 167 (249)
+++|++|||+|.....++.+.+.++|+..+++|+.+++.+++++++.|.++.. .|+||++||..+..+.++..
T Consensus 83 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~-------~g~iv~~ss~~~~~~~~~~~ 155 (260)
T PRK06198 83 GRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKA-------EGTIVNIGSMSAHGGQPFLA 155 (260)
T ss_pred CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC-------CCEEEEECCcccccCCCCcc
Confidence 99999999999877777778899999999999999999999999999976532 37899999999888888889
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccC---CC--ChHHHHHhhhhhhcccCCCCHHHHHHHHHH
Q 025672 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVS---KL--APEEIRSKATDYMAAYKFGEKWDIAMAALY 242 (249)
Q Consensus 168 ~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~---~~--~~~~~~~~~~~~~~~~~~~~~~dva~~v~~ 242 (249)
.|+++|+++++++++++.|+. +.||+++.|+||++.|++... .. ....+........+.+++.+++|+++++.|
T Consensus 156 ~Y~~sK~a~~~~~~~~a~e~~-~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~ 234 (260)
T PRK06198 156 AYCASKGALATLTRNAAYALL-RNRIRVNGLNIGWMATEGEDRIQREFHGAPDDWLEKAAATQPFGRLLDPDEVARAVAF 234 (260)
T ss_pred hhHHHHHHHHHHHHHHHHHhc-ccCeEEEEEeeccccCcchhhhhhhccCCChHHHHHHhccCCccCCcCHHHHHHHHHH
Confidence 999999999999999999998 889999999999999875321 10 112333344455677889999999999999
Q ss_pred hccCCC
Q 025672 243 LASDAG 248 (249)
Q Consensus 243 l~s~~a 248 (249)
|+++.+
T Consensus 235 l~~~~~ 240 (260)
T PRK06198 235 LLSDES 240 (260)
T ss_pred HcChhh
Confidence 998764
|
|
| >PRK09186 flagellin modification protein A; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-37 Score=253.53 Aligned_cols=224 Identities=26% Similarity=0.323 Sum_probs=189.1
Q ss_pred CCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhc--CCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 10 l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
+++|+++||||++|||+++++.|+++|++|++++|+.+.++++.+++... +..+.++.||++|++++.++++++.+.+
T Consensus 2 ~~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~ 81 (256)
T PRK09186 2 LKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKY 81 (256)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHc
Confidence 57899999999999999999999999999999999998888888877432 2346678999999999999999999999
Q ss_pred CCccEEEEcCCCCC---CCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCc
Q 025672 88 GKLDILVNAAAGNF---LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW 164 (249)
Q Consensus 88 ~~id~vi~~ag~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~ 164 (249)
+++|++|||||... ..++.+.+.+++...+++|+.+++.++++++|.|.+++. ++||++||..+..+..
T Consensus 82 ~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~--------~~iv~~sS~~~~~~~~ 153 (256)
T PRK09186 82 GKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGG--------GNLVNISSIYGVVAPK 153 (256)
T ss_pred CCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCC--------ceEEEEechhhhcccc
Confidence 99999999998543 346778899999999999999999999999999987653 7899999987654321
Q ss_pred ----------cchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHH
Q 025672 165 ----------YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKW 234 (249)
Q Consensus 165 ----------~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (249)
....|+++|+++++|++++++|+. ++||+|+.|+||++.++. +..+.+.+....+..++.+|+
T Consensus 154 ~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~-~~~i~v~~i~Pg~~~~~~------~~~~~~~~~~~~~~~~~~~~~ 226 (256)
T PRK09186 154 FEIYEGTSMTSPVEYAAIKAGIIHLTKYLAKYFK-DSNIRVNCVSPGGILDNQ------PEAFLNAYKKCCNGKGMLDPD 226 (256)
T ss_pred chhccccccCCcchhHHHHHHHHHHHHHHHHHhC-cCCeEEEEEecccccCCC------CHHHHHHHHhcCCccCCCCHH
Confidence 224699999999999999999998 889999999999997542 223334444555677889999
Q ss_pred HHHHHHHHhccCCC
Q 025672 235 DIAMAALYLASDAG 248 (249)
Q Consensus 235 dva~~v~~l~s~~a 248 (249)
|+|++++|++++.+
T Consensus 227 dva~~~~~l~~~~~ 240 (256)
T PRK09186 227 DICGTLVFLLSDQS 240 (256)
T ss_pred HhhhhHhheecccc
Confidence 99999999998764
|
|
| >PRK12742 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-37 Score=250.48 Aligned_cols=218 Identities=25% Similarity=0.343 Sum_probs=181.2
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCC-cchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR-KTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~-~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
.+++|++|||||++|||++++++|+++|++|++++++ .+..+++.+++ .+.++.+|++|++++.+++++ +
T Consensus 3 ~~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~-----~~~~~~~D~~~~~~~~~~~~~----~ 73 (237)
T PRK12742 3 AFTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQET-----GATAVQTDSADRDAVIDVVRK----S 73 (237)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHh-----CCeEEecCCCCHHHHHHHHHH----h
Confidence 4679999999999999999999999999999888764 44444444333 256788999999998877653 5
Q ss_pred CCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccc-ccCccc
Q 025672 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY-TATWYQ 166 (249)
Q Consensus 88 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~-~~~~~~ 166 (249)
+++|++|||+|.....+..+.++++|++.+++|+.+++.+++.+++.|.+. ++||++||..+. .+.++.
T Consensus 74 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~----------g~iv~isS~~~~~~~~~~~ 143 (237)
T PRK12742 74 GALDILVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEG----------GRIIIIGSVNGDRMPVAGM 143 (237)
T ss_pred CCCcEEEECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcC----------CeEEEEeccccccCCCCCC
Confidence 789999999998766667778899999999999999999999999998642 789999998774 566788
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhccC
Q 025672 167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246 (249)
Q Consensus 167 ~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~ 246 (249)
..|+++|++++++++.++.+++ ++||+||+|+||+++|++..... ...+......|++|+.+|+|+++++.||+++
T Consensus 144 ~~Y~~sKaa~~~~~~~la~~~~-~~gi~v~~v~Pg~~~t~~~~~~~---~~~~~~~~~~~~~~~~~p~~~a~~~~~l~s~ 219 (237)
T PRK12742 144 AAYAASKSALQGMARGLARDFG-PRGITINVVQPGPIDTDANPANG---PMKDMMHSFMAIKRHGRPEEVAGMVAWLAGP 219 (237)
T ss_pred cchHHhHHHHHHHHHHHHHHHh-hhCeEEEEEecCcccCCcccccc---HHHHHHHhcCCCCCCCCHHHHHHHHHHHcCc
Confidence 8999999999999999999998 88999999999999987543221 1223344556788999999999999999998
Q ss_pred CCC
Q 025672 247 AGQ 249 (249)
Q Consensus 247 ~a~ 249 (249)
+++
T Consensus 220 ~~~ 222 (237)
T PRK12742 220 EAS 222 (237)
T ss_pred ccC
Confidence 753
|
|
| >PRK08263 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-37 Score=255.87 Aligned_cols=225 Identities=24% Similarity=0.314 Sum_probs=195.4
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCc
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 90 (249)
.+|+++||||++|||++++++|+++|++|++++|+.+.++.+.+.+ +.++.++++|++|+++++++++++.+.++++
T Consensus 2 ~~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 78 (275)
T PRK08263 2 MEKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKY---GDRLLPLALDVTDRAAVFAAVETAVEHFGRL 78 (275)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc---cCCeeEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 4789999999999999999999999999999999987776655443 3468889999999999999999999999999
Q ss_pred cEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhhH
Q 025672 91 DILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVS 170 (249)
Q Consensus 91 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~ 170 (249)
|++|||+|.....++.+.+.++|++.+++|+.+++.++++++|.|.++.. ++||++||..+..+.+....|+
T Consensus 79 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--------~~iv~vsS~~~~~~~~~~~~Y~ 150 (275)
T PRK08263 79 DIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRS--------GHIIQISSIGGISAFPMSGIYH 150 (275)
T ss_pred CEEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC--------CEEEEEcChhhcCCCCCccHHH
Confidence 99999999988788888999999999999999999999999999987653 7899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCC-------hHHHHHhhhhhhcccCC-CCHHHHHHHHHH
Q 025672 171 AAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA-------PEEIRSKATDYMAAYKF-GEKWDIAMAALY 242 (249)
Q Consensus 171 ~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~-------~~~~~~~~~~~~~~~~~-~~~~dva~~v~~ 242 (249)
++|+++.++++.++.|++ ++||+++.|+||+++|++...... .+.....+.+..+..++ .+|+|+++++++
T Consensus 151 ~sKaa~~~~~~~la~e~~-~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~dva~~~~~ 229 (275)
T PRK08263 151 ASKWALEGMSEALAQEVA-EFGIKVTLVEPGGYSTDWAGTSAKRATPLDAYDTLREELAEQWSERSVDGDPEAAAEALLK 229 (275)
T ss_pred HHHHHHHHHHHHHHHHhh-hhCcEEEEEecCCccCCccccccccCCCchhhhhHHHHHHHHHHhccCCCCHHHHHHHHHH
Confidence 999999999999999998 889999999999999876532111 12233345555667778 999999999999
Q ss_pred hccCC
Q 025672 243 LASDA 247 (249)
Q Consensus 243 l~s~~ 247 (249)
|+++.
T Consensus 230 l~~~~ 234 (275)
T PRK08263 230 LVDAE 234 (275)
T ss_pred HHcCC
Confidence 99864
|
|
| >PRK05855 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-37 Score=281.84 Aligned_cols=231 Identities=22% Similarity=0.264 Sum_probs=200.1
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
..++++++|||||+||||++++++|+++|++|++++|+.++++++.+++...+.++.++.||++|+++++++++++.+.+
T Consensus 311 ~~~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 390 (582)
T PRK05855 311 GPFSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEH 390 (582)
T ss_pred ccCCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhc
Confidence 44678999999999999999999999999999999999998998888887777789999999999999999999999999
Q ss_pred CCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch
Q 025672 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 167 (249)
Q Consensus 88 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~ 167 (249)
+++|++|||||.....++.+.+.+++++++++|+.|+++++++++|.|.+++. +|+||++||..++.+.++..
T Consensus 391 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~-------~g~iv~~sS~~~~~~~~~~~ 463 (582)
T PRK05855 391 GVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGT-------GGHIVNVASAAAYAPSRSLP 463 (582)
T ss_pred CCCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC-------CcEEEEECChhhccCCCCCc
Confidence 99999999999987788888999999999999999999999999999987542 38999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCC----hH--HHHHhhhhhhcccCCCCHHHHHHHHH
Q 025672 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA----PE--EIRSKATDYMAAYKFGEKWDIAMAAL 241 (249)
Q Consensus 168 ~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~----~~--~~~~~~~~~~~~~~~~~~~dva~~v~ 241 (249)
.|++||+|+++|+++++.|++ ++||+|++|+||+|+|++...... .+ +.........+..+..+|||+|++++
T Consensus 464 ~Y~~sKaa~~~~~~~l~~e~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~va~~~~ 542 (582)
T PRK05855 464 AYATSKAAVLMLSECLRAELA-AAGIGVTAICPGFVDTNIVATTRFAGADAEDEARRRGRADKLYQRRGYGPEKVAKAIV 542 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHhc-ccCcEEEEEEeCCCcccchhccccCCcccchhhhHHhhhhhhccccCCCHHHHHHHHH
Confidence 999999999999999999998 889999999999999876543211 11 11111112223345568999999999
Q ss_pred HhccC
Q 025672 242 YLASD 246 (249)
Q Consensus 242 ~l~s~ 246 (249)
++++.
T Consensus 543 ~~~~~ 547 (582)
T PRK05855 543 DAVKR 547 (582)
T ss_pred HHHHc
Confidence 99865
|
|
| >TIGR02685 pter_reduc_Leis pteridine reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-37 Score=255.03 Aligned_cols=229 Identities=20% Similarity=0.263 Sum_probs=182.5
Q ss_pred cEEEEecCCCchhHHHHHHHHHcCCeEEEEeCC-cchHHHHHHHHHh-cCCCeeEEEccCCCHHHH----HHHHHHHHHH
Q 025672 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR-KTVLRSAVAALHS-LGIPAIGLEGDVRKREDA----VRVVESTINH 86 (249)
Q Consensus 13 k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~-~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~----~~~~~~~~~~ 86 (249)
++++||||++|||++++++|+++|++|++++|+ .+.++.+.+++.. .+.++.++.+|++|++++ +++++.+.+.
T Consensus 2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~ 81 (267)
T TIGR02685 2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFRA 81 (267)
T ss_pred CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHHc
Confidence 689999999999999999999999999998754 5667777777753 345677899999999865 5666666677
Q ss_pred hCCccEEEEcCCCCCCCCCCCCCH-----------HHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEec
Q 025672 87 FGKLDILVNAAAGNFLVPAEDLSP-----------NGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINIS 155 (249)
Q Consensus 87 ~~~id~vi~~ag~~~~~~~~~~~~-----------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~is 155 (249)
++++|+||||||.....++.+.+. ++|.+.+++|+.+++.+++++++.|.+.... .....++|++++
T Consensus 82 ~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~--~~~~~~~iv~~~ 159 (267)
T TIGR02685 82 FGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAE--QRSTNLSIVNLC 159 (267)
T ss_pred cCCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccc--cCCCCeEEEEeh
Confidence 899999999999765555444343 3588999999999999999999998643211 111247899999
Q ss_pred cccccccCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhccc-CCCCHH
Q 025672 156 ATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAY-KFGEKW 234 (249)
Q Consensus 156 s~~~~~~~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 234 (249)
|..+..+.++...|++||+|+++|+++++.|++ ++||+|++|+||++.|+... . ....+.+....|+. ++.+|+
T Consensus 160 s~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~-~~gi~v~~v~PG~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~ 234 (267)
T TIGR02685 160 DAMTDQPLLGFTMYTMAKHALEGLTRSAALELA-PLQIRVNGVAPGLSLLPDAM---P-FEVQEDYRRKVPLGQREASAE 234 (267)
T ss_pred hhhccCCCcccchhHHHHHHHHHHHHHHHHHHh-hhCeEEEEEecCCccCcccc---c-hhHHHHHHHhCCCCcCCCCHH
Confidence 998888888899999999999999999999998 88999999999999765221 1 22233344455664 788999
Q ss_pred HHHHHHHHhccCCC
Q 025672 235 DIAMAALYLASDAG 248 (249)
Q Consensus 235 dva~~v~~l~s~~a 248 (249)
|++++++||+++.+
T Consensus 235 ~va~~~~~l~~~~~ 248 (267)
T TIGR02685 235 QIADVVIFLVSPKA 248 (267)
T ss_pred HHHHHHHHHhCccc
Confidence 99999999998764
|
Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family. |
| >PRK07069 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-37 Score=252.16 Aligned_cols=225 Identities=28% Similarity=0.375 Sum_probs=194.4
Q ss_pred EEEecCCCchhHHHHHHHHHcCCeEEEEeCC-cchHHHHHHHHHhcC--CCeeEEEccCCCHHHHHHHHHHHHHHhCCcc
Q 025672 15 ALLTGGGSGIGFEISLQLGKHGAAIAIMGRR-KTVLRSAVAALHSLG--IPAIGLEGDVRKREDAVRVVESTINHFGKLD 91 (249)
Q Consensus 15 ~lItGa~~giG~~~a~~l~~~G~~v~l~~r~-~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 91 (249)
++||||++|||++++++|+++|++|++++|+ .+.++.+.+++.... ..+.++++|++|+++++++++++.+.++++|
T Consensus 2 ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 81 (251)
T PRK07069 2 AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGLS 81 (251)
T ss_pred EEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCcc
Confidence 7999999999999999999999999999998 666777777775432 2356789999999999999999999999999
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhhHH
Q 025672 92 ILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSA 171 (249)
Q Consensus 92 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~~ 171 (249)
++|||+|.....++.+.+.+++++.+++|+.+++.+++.+++.|.+++. ++||++||..+..+.++...|++
T Consensus 82 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~--------~~ii~~ss~~~~~~~~~~~~Y~~ 153 (251)
T PRK07069 82 VLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQP--------ASIVNISSVAAFKAEPDYTAYNA 153 (251)
T ss_pred EEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCC--------cEEEEecChhhccCCCCCchhHH
Confidence 9999999887777888899999999999999999999999999987643 88999999999988889999999
Q ss_pred HHHHHHHHHHHHHHHhcCCC--CeEEEEEecCccccccccCC---CChHHHHHhhhhhhcccCCCCHHHHHHHHHHhccC
Q 025672 172 AKAAVDSITRSLALEWGTDY--AIRVNGIAPGPIKDTAGVSK---LAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246 (249)
Q Consensus 172 sK~a~~~l~~~la~e~~~~~--gi~v~~v~pG~v~t~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~ 246 (249)
+|++++.++++++.|++ ++ +|+++.|+||+++|+..... ...++....+....|.+++.+|+|++++++||+++
T Consensus 154 sK~a~~~~~~~la~e~~-~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~ 232 (251)
T PRK07069 154 SKAAVASLTKSIALDCA-RRGLDVRCNSIHPTFIRTGIVDPIFQRLGEEEATRKLARGVPLGRLGEPDDVAHAVLYLASD 232 (251)
T ss_pred HHHHHHHHHHHHHHHhc-ccCCcEEEEEEeecccCCcchhHHhhhccchhHHHHHhccCCCCCCcCHHHHHHHHHHHcCc
Confidence 99999999999999987 54 59999999999998765321 12233344455667888999999999999999987
Q ss_pred CC
Q 025672 247 AG 248 (249)
Q Consensus 247 ~a 248 (249)
.+
T Consensus 233 ~~ 234 (251)
T PRK07069 233 ES 234 (251)
T ss_pred cc
Confidence 64
|
|
| >PRK06947 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-37 Score=250.51 Aligned_cols=230 Identities=27% Similarity=0.400 Sum_probs=192.5
Q ss_pred CcEEEEecCCCchhHHHHHHHHHcCCeEEEEe-CCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCc
Q 025672 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMG-RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (249)
Q Consensus 12 ~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~-r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 90 (249)
.|+++||||++|||.+++++|+++|++|+++. |+.+.++...+++...+.++.+++||+++.++++++++++.+.++++
T Consensus 2 ~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 81 (248)
T PRK06947 2 RKVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFGRL 81 (248)
T ss_pred CcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhcCCC
Confidence 37899999999999999999999999988764 56666777777777666789999999999999999999999889999
Q ss_pred cEEEEcCCCCCC-CCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCcc-chh
Q 025672 91 DILVNAAAGNFL-VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY-QIH 168 (249)
Q Consensus 91 d~vi~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~-~~~ 168 (249)
|++|||+|.... .++.+.+.++++..+++|+.+++.+++.+++.+..+..+ .+++||++||..+..+.+. ...
T Consensus 82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~-----~~~~ii~~sS~~~~~~~~~~~~~ 156 (248)
T PRK06947 82 DALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGG-----RGGAIVNVSSIASRLGSPNEYVD 156 (248)
T ss_pred CEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCC-----CCcEEEEECchhhcCCCCCCCcc
Confidence 999999998653 466778899999999999999999999999998754321 1378999999888776554 568
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhccCCC
Q 025672 169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAG 248 (249)
Q Consensus 169 y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~a 248 (249)
|+++|+++.++++++++++. +.||+|+.|+||+++|++......+ +..+......|..+..++||+++.++||+++.+
T Consensus 157 Y~~sK~~~~~~~~~la~~~~-~~~i~v~~i~Pg~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~e~va~~~~~l~~~~~ 234 (248)
T PRK06947 157 YAGSKGAVDTLTLGLAKELG-PHGVRVNAVRPGLIETEIHASGGQP-GRAARLGAQTPLGRAGEADEVAETIVWLLSDAA 234 (248)
T ss_pred cHhhHHHHHHHHHHHHHHhh-hhCcEEEEEeccCcccccccccCCH-HHHHHHhhcCCCCCCcCHHHHHHHHHHHcCccc
Confidence 99999999999999999998 8899999999999998754322112 222333445677888999999999999999865
|
|
| >PRK13394 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-37 Score=253.21 Aligned_cols=230 Identities=27% Similarity=0.376 Sum_probs=199.0
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhC
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 88 (249)
.+++|++|||||+++||++++++|+++|++|++++|++++.++..+++.+.+.++.++++|++|.++++++++++.+.++
T Consensus 4 ~~~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 83 (262)
T PRK13394 4 NLNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFG 83 (262)
T ss_pred cCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 46789999999999999999999999999999999999888888888877777889999999999999999999999999
Q ss_pred CccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHH-HhcCCCCCCCCCCceEEEeccccccccCccch
Q 025672 89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYL-KKGGRGQASSSSGGIIINISATLHYTATWYQI 167 (249)
Q Consensus 89 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~ 167 (249)
++|+||||+|.....++.+.+.++++..+++|+.+++.+++.+++.+ .+.+ .++||++||..+..+.+...
T Consensus 84 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~--------~~~iv~~ss~~~~~~~~~~~ 155 (262)
T PRK13394 84 SVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDR--------GGVVIYMGSVHSHEASPLKS 155 (262)
T ss_pred CCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcC--------CcEEEEEcchhhcCCCCCCc
Confidence 99999999998777777778889999999999999999999999999 5433 38899999998888888888
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCC---------hHHHH-HhhhhhhcccCCCCHHHHH
Q 025672 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA---------PEEIR-SKATDYMAAYKFGEKWDIA 237 (249)
Q Consensus 168 ~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~---------~~~~~-~~~~~~~~~~~~~~~~dva 237 (249)
.|+++|+++.++++.++.++. +.||+++.|.||+++|+....... .++.. +.+....+.+++.+++|++
T Consensus 156 ~y~~sk~a~~~~~~~la~~~~-~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva 234 (262)
T PRK13394 156 AYVTAKHGLLGLARVLAKEGA-KHNVRSHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVMLGKTVDGVFTTVEDVA 234 (262)
T ss_pred ccHHHHHHHHHHHHHHHHHhh-hcCeEEEEEeeCcccchhhhhhhHhhhhccCCChHHHHHHHHhcCCCCCCCCCHHHHH
Confidence 999999999999999999997 789999999999999875432211 11111 2223345567899999999
Q ss_pred HHHHHhccCC
Q 025672 238 MAALYLASDA 247 (249)
Q Consensus 238 ~~v~~l~s~~ 247 (249)
+++++|+++.
T Consensus 235 ~a~~~l~~~~ 244 (262)
T PRK13394 235 QTVLFLSSFP 244 (262)
T ss_pred HHHHHHcCcc
Confidence 9999999864
|
|
| >PRK06057 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-37 Score=253.14 Aligned_cols=224 Identities=26% Similarity=0.427 Sum_probs=189.2
Q ss_pred CCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCC
Q 025672 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK 89 (249)
Q Consensus 10 l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 89 (249)
+++|+++||||++|||.+++++|+++|++|++++|+..+++...+++. ..++++|++|+++++++++++.+.+++
T Consensus 5 ~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~-----~~~~~~D~~~~~~~~~~~~~~~~~~~~ 79 (255)
T PRK06057 5 LAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVG-----GLFVPTDVTDEDAVNALFDTAAETYGS 79 (255)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcC-----CcEEEeeCCCHHHHHHHHHHHHHHcCC
Confidence 679999999999999999999999999999999999877666655542 257899999999999999999988899
Q ss_pred ccEEEEcCCCCCC--CCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC-ccc
Q 025672 90 LDILVNAAAGNFL--VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT-WYQ 166 (249)
Q Consensus 90 id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~-~~~ 166 (249)
+|++|||+|.... .++.+.+.+.|++.+++|+.+++.+++.++|.|.++.. ++||++||..+..+. ++.
T Consensus 80 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~--------g~iv~~sS~~~~~g~~~~~ 151 (255)
T PRK06057 80 VDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGK--------GSIINTASFVAVMGSATSQ 151 (255)
T ss_pred CCEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCC--------cEEEEEcchhhccCCCCCC
Confidence 9999999997643 45667788999999999999999999999999987543 789999998776665 367
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCC--hHHHHHhhhhhhcccCCCCHHHHHHHHHHhc
Q 025672 167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA--PEEIRSKATDYMAAYKFGEKWDIAMAALYLA 244 (249)
Q Consensus 167 ~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~ 244 (249)
..|+++|+++.++++.++.++. ++||+|++|+||+++|+....... ++.. .......|.+++.+|+|+++++.||+
T Consensus 152 ~~Y~~sKaal~~~~~~l~~~~~-~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~a~~~~~l~ 229 (255)
T PRK06057 152 ISYTASKGGVLAMSRELGVQFA-RQGIRVNALCPGPVNTPLLQELFAKDPERA-ARRLVHVPMGRFAEPEEIAAAVAFLA 229 (255)
T ss_pred cchHHHHHHHHHHHHHHHHHHH-hhCcEEEEEeeCCcCCchhhhhccCCHHHH-HHHHhcCCCCCCcCHHHHHHHHHHHh
Confidence 7899999999999999999998 889999999999999876433221 2222 22233467788999999999999999
Q ss_pred cCCC
Q 025672 245 SDAG 248 (249)
Q Consensus 245 s~~a 248 (249)
++.+
T Consensus 230 ~~~~ 233 (255)
T PRK06057 230 SDDA 233 (255)
T ss_pred Cccc
Confidence 8764
|
|
| >PRK12429 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-37 Score=250.88 Aligned_cols=229 Identities=33% Similarity=0.440 Sum_probs=200.7
Q ss_pred CCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCC
Q 025672 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK 89 (249)
Q Consensus 10 l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 89 (249)
+++|+++|||++++||++++++|+++|++|++++|+.+..+....++...+.++.++.||++|+++++.+++++.+.+++
T Consensus 2 ~~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 81 (258)
T PRK12429 2 LKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGG 81 (258)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 57899999999999999999999999999999999999888888888777778999999999999999999999999999
Q ss_pred ccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhh
Q 025672 90 LDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHV 169 (249)
Q Consensus 90 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y 169 (249)
+|+||||+|.....++.+.+.++++..+++|+.+++.+++.+++.|.++.. ++||++||..+..+.++...|
T Consensus 82 ~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--------~~iv~iss~~~~~~~~~~~~y 153 (258)
T PRK12429 82 VDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGG--------GRIINMASVHGLVGSAGKAAY 153 (258)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCC--------eEEEEEcchhhccCCCCcchh
Confidence 999999999877777778889999999999999999999999999987653 889999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCC---------ChH-HHHHhhhhhhcccCCCCHHHHHHH
Q 025672 170 SAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL---------APE-EIRSKATDYMAAYKFGEKWDIAMA 239 (249)
Q Consensus 170 ~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~---------~~~-~~~~~~~~~~~~~~~~~~~dva~~ 239 (249)
+++|+++.++++.++.|+. +.||+++.++||+++|+...... ... ...+.+....+.+++.+++|+|++
T Consensus 154 ~~~k~a~~~~~~~l~~~~~-~~~i~v~~~~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~ 232 (258)
T PRK12429 154 VSAKHGLIGLTKVVALEGA-THGVTVNAICPGYVDTPLVRKQIPDLAKERGISEEEVLEDVLLPLVPQKRFTTVEEIADY 232 (258)
T ss_pred HHHHHHHHHHHHHHHHHhc-ccCeEEEEEecCCCcchhhhhhhhhhccccCCChHHHHHHHHhccCCccccCCHHHHHHH
Confidence 9999999999999999997 88999999999999976543211 111 112233344566789999999999
Q ss_pred HHHhccCC
Q 025672 240 ALYLASDA 247 (249)
Q Consensus 240 v~~l~s~~ 247 (249)
+.||+++.
T Consensus 233 ~~~l~~~~ 240 (258)
T PRK12429 233 ALFLASFA 240 (258)
T ss_pred HHHHcCcc
Confidence 99999764
|
|
| >PRK08703 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-37 Score=250.28 Aligned_cols=221 Identities=21% Similarity=0.291 Sum_probs=190.2
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhc-CCCeeEEEccCCC--HHHHHHHHHHHHH
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL-GIPAIGLEGDVRK--REDAVRVVESTIN 85 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~--~~~~~~~~~~~~~ 85 (249)
.|++|+++||||++|||++++++|+++|++|++++|+.++++...+++... +..+.++++|+++ .++++++++++.+
T Consensus 3 ~l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~ 82 (239)
T PRK08703 3 TLSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAE 82 (239)
T ss_pred CCCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHH
Confidence 367899999999999999999999999999999999998888888887644 3467789999986 5789999999988
Q ss_pred Hh-CCccEEEEcCCCCC-CCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC
Q 025672 86 HF-GKLDILVNAAAGNF-LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT 163 (249)
Q Consensus 86 ~~-~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~ 163 (249)
.+ +++|++|||||... ..++.+.+.++|++.+++|+.+++.+++++++.|.+.+. ++++++||..+..+.
T Consensus 83 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~--------~~iv~~ss~~~~~~~ 154 (239)
T PRK08703 83 ATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPD--------ASVIFVGESHGETPK 154 (239)
T ss_pred HhCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCC--------CEEEEEeccccccCC
Confidence 88 89999999999754 357788899999999999999999999999999976543 789999999999888
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHhcCCC-CeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHH
Q 025672 164 WYQIHVSAAKAAVDSITRSLALEWGTDY-AIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALY 242 (249)
Q Consensus 164 ~~~~~y~~sK~a~~~l~~~la~e~~~~~-gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~ 242 (249)
++...|++||+++++|+++++.|+. ++ +|+|+.|.||+++|++.......+. ..++.+++|++.++.|
T Consensus 155 ~~~~~Y~~sKaa~~~~~~~la~e~~-~~~~i~v~~v~pG~v~t~~~~~~~~~~~----------~~~~~~~~~~~~~~~~ 223 (239)
T PRK08703 155 AYWGGFGASKAALNYLCKVAADEWE-RFGNLRANVLVPGPINSPQRIKSHPGEA----------KSERKSYGDVLPAFVW 223 (239)
T ss_pred CCccchHHhHHHHHHHHHHHHHHhc-cCCCeEEEEEecCcccCccccccCCCCC----------ccccCCHHHHHHHHHH
Confidence 8889999999999999999999997 65 7999999999999876443221110 1245799999999999
Q ss_pred hccCCC
Q 025672 243 LASDAG 248 (249)
Q Consensus 243 l~s~~a 248 (249)
++++++
T Consensus 224 ~~~~~~ 229 (239)
T PRK08703 224 WASAES 229 (239)
T ss_pred HhCccc
Confidence 999865
|
|
| >PRK05866 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-37 Score=256.87 Aligned_cols=222 Identities=22% Similarity=0.264 Sum_probs=187.8
Q ss_pred CCCCCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHH
Q 025672 4 PFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVEST 83 (249)
Q Consensus 4 ~~~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 83 (249)
+++.+.+++|+++||||++|||++++++|+++|++|++++|+.+.++++.+++...+.++.++++|++|.++++++++++
T Consensus 32 ~~~~~~~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~ 111 (293)
T PRK05866 32 PRQPVDLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADV 111 (293)
T ss_pred CCCCcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHH
Confidence 45567788999999999999999999999999999999999998888888888766777889999999999999999999
Q ss_pred HHHhCCccEEEEcCCCCCCCCCCCC--CHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc
Q 025672 84 INHFGKLDILVNAAAGNFLVPAEDL--SPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT 161 (249)
Q Consensus 84 ~~~~~~id~vi~~ag~~~~~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~ 161 (249)
.+.++++|++|||||.....++.+. +.++++..+++|+.+++.++++++|.|.+++. |+||++||.....
T Consensus 112 ~~~~g~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~--------g~iv~isS~~~~~ 183 (293)
T PRK05866 112 EKRIGGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGD--------GHIINVATWGVLS 183 (293)
T ss_pred HHHcCCCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--------cEEEEECChhhcC
Confidence 9999999999999998766555442 45788999999999999999999999987653 8899999976654
Q ss_pred -cCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHH
Q 025672 162 -ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAA 240 (249)
Q Consensus 162 -~~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v 240 (249)
+.++...|+++|+|+++|+++++.|+. ++||+|++|+||+++|++...... . ......+||++|+.+
T Consensus 184 ~~~p~~~~Y~asKaal~~l~~~la~e~~-~~gI~v~~v~pg~v~T~~~~~~~~----------~-~~~~~~~pe~vA~~~ 251 (293)
T PRK05866 184 EASPLFSVYNASKAALSAVSRVIETEWG-DRGVHSTTLYYPLVATPMIAPTKA----------Y-DGLPALTADEAAEWM 251 (293)
T ss_pred CCCCCcchHHHHHHHHHHHHHHHHHHhc-ccCcEEEEEEcCcccCcccccccc----------c-cCCCCCCHHHHHHHH
Confidence 356778899999999999999999998 889999999999999876532110 0 001235788888887
Q ss_pred HHhcc
Q 025672 241 LYLAS 245 (249)
Q Consensus 241 ~~l~s 245 (249)
+..+.
T Consensus 252 ~~~~~ 256 (293)
T PRK05866 252 VTAAR 256 (293)
T ss_pred HHHHh
Confidence 77664
|
|
| >PRK12746 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-37 Score=250.31 Aligned_cols=228 Identities=32% Similarity=0.412 Sum_probs=195.9
Q ss_pred CCCcEEEEecCCCchhHHHHHHHHHcCCeEEEE-eCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh-
Q 025672 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIM-GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF- 87 (249)
Q Consensus 10 l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~-~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~- 87 (249)
+++|+++||||++|||.+++++|+++|++|+++ .|+.++++...+++...+.++.++++|++|++++.++++++.+.+
T Consensus 4 ~~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~ 83 (254)
T PRK12746 4 LDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQ 83 (254)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHhc
Confidence 678999999999999999999999999998774 787777777777776556678899999999999999999998877
Q ss_pred -----CCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc
Q 025672 88 -----GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 162 (249)
Q Consensus 88 -----~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~ 162 (249)
+++|++|||||.....++.+.+.+.|+..+++|+.+++++++++++.+.+. +++|++||..+..+
T Consensus 84 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~----------~~~v~~sS~~~~~~ 153 (254)
T PRK12746 84 IRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAE----------GRVINISSAEVRLG 153 (254)
T ss_pred cccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcC----------CEEEEECCHHhcCC
Confidence 479999999998777777788899999999999999999999999998653 67999999988888
Q ss_pred CccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHH
Q 025672 163 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALY 242 (249)
Q Consensus 163 ~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~ 242 (249)
.++...|+++|++++.++++++.++. ++|++++.|+||+++|+........+..........+++++.+++|+++++.+
T Consensus 154 ~~~~~~Y~~sK~a~~~~~~~~~~~~~-~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~ 232 (254)
T PRK12746 154 FTGSIAYGLSKGALNTMTLPLAKHLG-ERGITVNTIMPGYTKTDINAKLLDDPEIRNFATNSSVFGRIGQVEDIADAVAF 232 (254)
T ss_pred CCCCcchHhhHHHHHHHHHHHHHHHh-hcCcEEEEEEECCccCcchhhhccChhHHHHHHhcCCcCCCCCHHHHHHHHHH
Confidence 88899999999999999999999997 88999999999999987654333333343434455567888899999999999
Q ss_pred hccCCC
Q 025672 243 LASDAG 248 (249)
Q Consensus 243 l~s~~a 248 (249)
++++.+
T Consensus 233 l~~~~~ 238 (254)
T PRK12746 233 LASSDS 238 (254)
T ss_pred HcCccc
Confidence 998753
|
|
| >PRK07454 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-37 Score=249.40 Aligned_cols=221 Identities=25% Similarity=0.308 Sum_probs=193.6
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCc
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 90 (249)
++|+++||||+++||+.++++|+++|++|++++|+.++.+.+.+++...+.++.++.+|++|++++.++++++.+.++++
T Consensus 5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 84 (241)
T PRK07454 5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGCP 84 (241)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 35899999999999999999999999999999999888888888887666789999999999999999999999999999
Q ss_pred cEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhhH
Q 025672 91 DILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVS 170 (249)
Q Consensus 91 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~ 170 (249)
|++|||+|.....++.+.+.++++..+++|+.+++.+++.+++.|.++.. ++||++||..+..+.++...|+
T Consensus 85 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~--------~~iv~isS~~~~~~~~~~~~Y~ 156 (241)
T PRK07454 85 DVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGG--------GLIINVSSIAARNAFPQWGAYC 156 (241)
T ss_pred CEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCC--------cEEEEEccHHhCcCCCCccHHH
Confidence 99999999877677778889999999999999999999999999977543 8899999999888888899999
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhccCCC
Q 025672 171 AAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAG 248 (249)
Q Consensus 171 ~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~a 248 (249)
.+|++++.++++++.|+. +.||++++|.||++.|+...... . .......++.+++|+|+++.||+++..
T Consensus 157 ~sK~~~~~~~~~~a~e~~-~~gi~v~~i~pg~i~t~~~~~~~----~----~~~~~~~~~~~~~~va~~~~~l~~~~~ 225 (241)
T PRK07454 157 VSKAALAAFTKCLAEEER-SHGIRVCTITLGAVNTPLWDTET----V----QADFDRSAMLSPEQVAQTILHLAQLPP 225 (241)
T ss_pred HHHHHHHHHHHHHHHHhh-hhCCEEEEEecCcccCCcccccc----c----ccccccccCCCHHHHHHHHHHHHcCCc
Confidence 999999999999999998 88999999999999987532211 0 111122457899999999999998653
|
|
| >PRK07774 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-36 Score=248.57 Aligned_cols=227 Identities=28% Similarity=0.415 Sum_probs=196.7
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
+++++|+++||||++|||++++++|+++|++|++++|+.+..+.+.+++...+.++.++.+|++|.++++++++++.+.+
T Consensus 2 ~~~~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 81 (250)
T PRK07774 2 GRFDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAF 81 (250)
T ss_pred cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHh
Confidence 34688999999999999999999999999999999999887777777776656678899999999999999999999999
Q ss_pred CCccEEEEcCCCCC---CCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCc
Q 025672 88 GKLDILVNAAAGNF---LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW 164 (249)
Q Consensus 88 ~~id~vi~~ag~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~ 164 (249)
+++|+||||+|... ..++.+.+.+++++.+++|+.+++++++++++++.+.+ +++||++||..++.
T Consensus 82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--------~~~iv~~sS~~~~~--- 150 (250)
T PRK07774 82 GGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRG--------GGAIVNQSSTAAWL--- 150 (250)
T ss_pred CCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhC--------CcEEEEEecccccC---
Confidence 99999999999764 34566778899999999999999999999999997754 38899999987654
Q ss_pred cchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhc
Q 025672 165 YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLA 244 (249)
Q Consensus 165 ~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~ 244 (249)
+...|+++|++++.+++++++++. +.||+++.|+||+++|+.... ..++...+......+..++.+++|+++++++++
T Consensus 151 ~~~~Y~~sK~a~~~~~~~l~~~~~-~~~i~v~~v~pg~~~t~~~~~-~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~ 228 (250)
T PRK07774 151 YSNFYGLAKVGLNGLTQQLARELG-GMNIRVNAIAPGPIDTEATRT-VTPKEFVADMVKGIPLSRMGTPEDLVGMCLFLL 228 (250)
T ss_pred CccccHHHHHHHHHHHHHHHHHhC-ccCeEEEEEecCcccCccccc-cCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh
Confidence 356899999999999999999998 889999999999999776543 334455556667777788899999999999999
Q ss_pred cCC
Q 025672 245 SDA 247 (249)
Q Consensus 245 s~~ 247 (249)
++.
T Consensus 229 ~~~ 231 (250)
T PRK07774 229 SDE 231 (250)
T ss_pred Chh
Confidence 864
|
|
| >PRK12824 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-36 Score=247.58 Aligned_cols=225 Identities=27% Similarity=0.272 Sum_probs=194.2
Q ss_pred cEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcc-hHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCcc
Q 025672 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT-VLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD 91 (249)
Q Consensus 13 k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~-~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 91 (249)
|+++|||++++||++++++|+++|++|++++|+.. ..++....+...+.++.++.+|++|+++++++++++.+.++++|
T Consensus 3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~id 82 (245)
T PRK12824 3 KIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEGPVD 82 (245)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 68999999999999999999999999999999854 23333333333455789999999999999999999999999999
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhhHH
Q 025672 92 ILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSA 171 (249)
Q Consensus 92 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~~ 171 (249)
++|||+|.....++.+.+.++|++++++|+.+++++++++++.+.+... ++||++||..+..+.++.+.|++
T Consensus 83 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--------~~iv~iss~~~~~~~~~~~~Y~~ 154 (245)
T PRK12824 83 ILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQGY--------GRIINISSVNGLKGQFGQTNYSA 154 (245)
T ss_pred EEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCC--------eEEEEECChhhccCCCCChHHHH
Confidence 9999999887777788899999999999999999999999999976543 88999999999888888999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhccCCC
Q 025672 172 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAG 248 (249)
Q Consensus 172 sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~a 248 (249)
+|+++++++++++.|+. +.||+++.|.||++.|+.... . .+...+.+....|.+++.+++|+++++.||+++.+
T Consensus 155 sK~a~~~~~~~l~~~~~-~~~i~v~~v~pg~~~t~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~ 228 (245)
T PRK12824 155 AKAGMIGFTKALASEGA-RYGITVNCIAPGYIATPMVEQ-M-GPEVLQSIVNQIPMKRLGTPEEIAAAVAFLVSEAA 228 (245)
T ss_pred HHHHHHHHHHHHHHHHH-HhCeEEEEEEEcccCCcchhh-c-CHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCccc
Confidence 99999999999999998 889999999999999765432 2 23444556666788889999999999999998753
|
|
| >PLN00015 protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-37 Score=258.41 Aligned_cols=226 Identities=15% Similarity=0.124 Sum_probs=183.1
Q ss_pred EEecCCCchhHHHHHHHHHcC-CeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCccEEE
Q 025672 16 LLTGGGSGIGFEISLQLGKHG-AAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILV 94 (249)
Q Consensus 16 lItGa~~giG~~~a~~l~~~G-~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi 94 (249)
|||||++|||.+++++|+++| ++|++++|+.++++++.+++...+.++.++++|++|.++++++++++.+.++++|++|
T Consensus 1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~lI 80 (308)
T PLN00015 1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDVLV 80 (308)
T ss_pred CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence 699999999999999999999 9999999998888888877764456788999999999999999999998889999999
Q ss_pred EcCCCCCC-CCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc-----------
Q 025672 95 NAAAGNFL-VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA----------- 162 (249)
Q Consensus 95 ~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~----------- 162 (249)
||||+... .++.+.+.++|++++++|+.|++.+++.++|.|.+++. .+|+||++||..+..+
T Consensus 81 nnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~------~~g~IV~vsS~~~~~~~~~~~~~~~~~ 154 (308)
T PLN00015 81 CNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDY------PSKRLIIVGSITGNTNTLAGNVPPKAN 154 (308)
T ss_pred ECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCC------CCCEEEEEeccccccccccccCCCccc
Confidence 99998543 35667889999999999999999999999999987531 0278999999866421
Q ss_pred ------------------------CccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcc-ccccccCCCChHHH
Q 025672 163 ------------------------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPI-KDTAGVSKLAPEEI 217 (249)
Q Consensus 163 ------------------------~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v-~t~~~~~~~~~~~~ 217 (249)
..+..+|++||+|+..+++.+++++.++.||+|++|+||+| .|++... ..+...
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~-~~~~~~ 233 (308)
T PLN00015 155 LGDLRGLAGGLNGLNSSAMIDGGEFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIATTGLFRE-HIPLFR 233 (308)
T ss_pred hhhhhhhhcccCCccchhhccccCCcHHHHHhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCcccccc-ccHHHH
Confidence 12456799999999999999999996236999999999999 5554432 222111
Q ss_pred -HHhhhhhhcccCCCCHHHHHHHHHHhccCCC
Q 025672 218 -RSKATDYMAAYKFGEKWDIAMAALYLASDAG 248 (249)
Q Consensus 218 -~~~~~~~~~~~~~~~~~dva~~v~~l~s~~a 248 (249)
........+.++..+||+.|+.++||+++.+
T Consensus 234 ~~~~~~~~~~~~~~~~pe~~a~~~~~l~~~~~ 265 (308)
T PLN00015 234 LLFPPFQKYITKGYVSEEEAGKRLAQVVSDPS 265 (308)
T ss_pred HHHHHHHHHHhcccccHHHhhhhhhhhccccc
Confidence 1111234456678999999999999998754
|
|
| >PRK05650 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-36 Score=251.42 Aligned_cols=225 Identities=21% Similarity=0.209 Sum_probs=193.3
Q ss_pred cEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCccE
Q 025672 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI 92 (249)
Q Consensus 13 k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ 92 (249)
|+++||||+||||++++++|+++|++|++++|+.++++...+++...+.++.+++||++|+++++++++.+.+.++++|+
T Consensus 1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~ 80 (270)
T PRK05650 1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDV 80 (270)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 47999999999999999999999999999999998888888888777778999999999999999999999999999999
Q ss_pred EEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhhHHH
Q 025672 93 LVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAA 172 (249)
Q Consensus 93 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~~s 172 (249)
||||+|.....++.+.+.++|++.+++|+.+++.+++.++|.|.+.+. ++||++||..+..+.++.+.|+++
T Consensus 81 lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~--------~~iv~vsS~~~~~~~~~~~~Y~~s 152 (270)
T PRK05650 81 IVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKS--------GRIVNIASMAGLMQGPAMSSYNVA 152 (270)
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCC--------CEEEEECChhhcCCCCCchHHHHH
Confidence 999999887778888899999999999999999999999999987643 789999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhccC
Q 025672 173 KAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246 (249)
Q Consensus 173 K~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~ 246 (249)
|+++++++++++.|+. +.||+++.|+||+++|+.........................+++|+|+.++..+++
T Consensus 153 Kaa~~~~~~~l~~e~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vA~~i~~~l~~ 225 (270)
T PRK05650 153 KAGVVALSETLLVELA-DDEIGVHVVCPSFFQTNLLDSFRGPNPAMKAQVGKLLEKSPITAADIADYIYQQVAK 225 (270)
T ss_pred HHHHHHHHHHHHHHhc-ccCcEEEEEecCccccCcccccccCchhHHHHHHHHhhcCCCCHHHHHHHHHHHHhC
Confidence 9999999999999998 889999999999999875433221111111111111123457899999999988765
|
|
| >KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-38 Score=243.82 Aligned_cols=186 Identities=29% Similarity=0.400 Sum_probs=164.9
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhc--CCCeeEEEccCCCHHHHHHHHHHHHH
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVESTIN 85 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~ 85 (249)
++++||.+++||+.||||++++++|+++|.++.+++.+.+..+. ..++.+. ...+.|++||+++..++++.++++.+
T Consensus 1 m~~tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a-~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~ 79 (261)
T KOG4169|consen 1 MDLTGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPEA-IAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILA 79 (261)
T ss_pred CcccCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHHH-HHHHhccCCCceEEEEEeccccHHHHHHHHHHHHH
Confidence 57889999999999999999999999999998888877777544 4444443 35688999999999999999999999
Q ss_pred HhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCcc
Q 025672 86 HFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY 165 (249)
Q Consensus 86 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~ 165 (249)
+||.+|++||+||+. +..+|++++.+|+.|.++-+...+|+|.+++.+. +|-||++||..+..|.+.
T Consensus 80 ~fg~iDIlINgAGi~--------~dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~-----GGiIvNmsSv~GL~P~p~ 146 (261)
T KOG4169|consen 80 TFGTIDILINGAGIL--------DDKDWERTINVNLTGVINGTQLALPYMDKKQGGK-----GGIIVNMSSVAGLDPMPV 146 (261)
T ss_pred HhCceEEEEcccccc--------cchhHHHhhccchhhhhhhhhhhhhhhhhhcCCC-----CcEEEEeccccccCcccc
Confidence 999999999999974 4566999999999999999999999998876433 699999999999999999
Q ss_pred chhhHHHHHHHHHHHHHHHHHhc-CCCCeEEEEEecCcccccc
Q 025672 166 QIHVSAAKAAVDSITRSLALEWG-TDYAIRVNGIAPGPIKDTA 207 (249)
Q Consensus 166 ~~~y~~sK~a~~~l~~~la~e~~-~~~gi~v~~v~pG~v~t~~ 207 (249)
.+.|++||+++.+|+|++|.... ++.||++++||||++.|+.
T Consensus 147 ~pVY~AsKaGVvgFTRSla~~ayy~~sGV~~~avCPG~t~t~l 189 (261)
T KOG4169|consen 147 FPVYAASKAGVVGFTRSLADLAYYQRSGVRFNAVCPGFTRTDL 189 (261)
T ss_pred chhhhhcccceeeeehhhhhhhhHhhcCEEEEEECCCcchHHH
Confidence 99999999999999999998732 3779999999999999864
|
|
| >PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-36 Score=247.51 Aligned_cols=227 Identities=30% Similarity=0.417 Sum_probs=195.5
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhC
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 88 (249)
++++++++|||+++|||.++++.|+++|++|++++|+.++++...+++...+.++.++++|+++.++++++++.+.+.++
T Consensus 2 ~~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (253)
T PRK08217 2 DLKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFG 81 (253)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 47899999999999999999999999999999999999888888888877677899999999999999999999988889
Q ss_pred CccEEEEcCCCCCCCCC---------CCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccc
Q 025672 89 KLDILVNAAAGNFLVPA---------EDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH 159 (249)
Q Consensus 89 ~id~vi~~ag~~~~~~~---------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~ 159 (249)
++|+||||+|....... .+.+.+++..++++|+.+++.+.+.+.+.+.++.. ++.|+++||..
T Consensus 82 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~-------~~~iv~~ss~~- 153 (253)
T PRK08217 82 QLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGS-------KGVIINISSIA- 153 (253)
T ss_pred CCCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCC-------CeEEEEEcccc-
Confidence 99999999997543221 56678999999999999999999999999976532 37899998864
Q ss_pred cccCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHH
Q 025672 160 YTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMA 239 (249)
Q Consensus 160 ~~~~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~ 239 (249)
..+.++...|+++|+|+++++++++.|+. ++||++++|+||+++|++... . .+...+.+....|.+++.+++|++++
T Consensus 154 ~~~~~~~~~Y~~sK~a~~~l~~~la~~~~-~~~i~v~~v~pg~v~t~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~a~~ 230 (253)
T PRK08217 154 RAGNMGQTNYSASKAGVAAMTVTWAKELA-RYGIRVAAIAPGVIETEMTAA-M-KPEALERLEKMIPVGRLGEPEEIAHT 230 (253)
T ss_pred ccCCCCCchhHHHHHHHHHHHHHHHHHHH-HcCcEEEEEeeCCCcCccccc-c-CHHHHHHHHhcCCcCCCcCHHHHHHH
Confidence 45667788999999999999999999997 889999999999999775432 2 23445556667788889999999999
Q ss_pred HHHhccC
Q 025672 240 ALYLASD 246 (249)
Q Consensus 240 v~~l~s~ 246 (249)
+.||+++
T Consensus 231 ~~~l~~~ 237 (253)
T PRK08217 231 VRFIIEN 237 (253)
T ss_pred HHHHHcC
Confidence 9999965
|
|
| >PRK09134 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-36 Score=247.46 Aligned_cols=226 Identities=23% Similarity=0.321 Sum_probs=191.0
Q ss_pred CCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCC-cchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHH
Q 025672 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR-KTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN 85 (249)
Q Consensus 7 ~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~-~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 85 (249)
.++..+|++|||||++|||++++++|+++|++|++++++ .+.++.+.+++...+.++.++.+|++|.++++++++++.+
T Consensus 4 ~~~~~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 83 (258)
T PRK09134 4 MSMAAPRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASA 83 (258)
T ss_pred CcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence 344578999999999999999999999999999887664 4556677777766677899999999999999999999999
Q ss_pred HhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCcc
Q 025672 86 HFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY 165 (249)
Q Consensus 86 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~ 165 (249)
.++++|+||||||.....++.+.+.++++..+++|+.+++.+++++.+.+.+.. .++||+++|..+..+.+.
T Consensus 84 ~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--------~~~iv~~~s~~~~~~~p~ 155 (258)
T PRK09134 84 ALGPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADA--------RGLVVNMIDQRVWNLNPD 155 (258)
T ss_pred HcCCCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC--------CceEEEECchhhcCCCCC
Confidence 899999999999987777778889999999999999999999999999987654 378999999877777777
Q ss_pred chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhcc
Q 025672 166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245 (249)
Q Consensus 166 ~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s 245 (249)
...|+++|++++++++++++++. +. |+|++|+||++.|... .....+. ......+.++..+++|+|++++|+++
T Consensus 156 ~~~Y~~sK~a~~~~~~~la~~~~-~~-i~v~~i~PG~v~t~~~---~~~~~~~-~~~~~~~~~~~~~~~d~a~~~~~~~~ 229 (258)
T PRK09134 156 FLSYTLSKAALWTATRTLAQALA-PR-IRVNAIGPGPTLPSGR---QSPEDFA-RQHAATPLGRGSTPEEIAAAVRYLLD 229 (258)
T ss_pred chHHHHHHHHHHHHHHHHHHHhc-CC-cEEEEeecccccCCcc---cChHHHH-HHHhcCCCCCCcCHHHHHHHHHHHhc
Confidence 78999999999999999999996 54 9999999999986531 1122222 23334567788999999999999997
Q ss_pred C
Q 025672 246 D 246 (249)
Q Consensus 246 ~ 246 (249)
.
T Consensus 230 ~ 230 (258)
T PRK09134 230 A 230 (258)
T ss_pred C
Confidence 4
|
|
| >TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-36 Score=245.37 Aligned_cols=225 Identities=27% Similarity=0.349 Sum_probs=196.3
Q ss_pred cEEEEecCCCchhHHHHHHHHHcCCeEEEEeC-CcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCcc
Q 025672 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGR-RKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD 91 (249)
Q Consensus 13 k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r-~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 91 (249)
|++||||+++|||++++++|+++|++|+++.| +.+..++..+++...+.++.++.+|++|+++++++++++.+.++++|
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 80 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGPID 80 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCc
Confidence 78999999999999999999999999999888 55556666666655566899999999999999999999999999999
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhhHH
Q 025672 92 ILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSA 171 (249)
Q Consensus 92 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~~ 171 (249)
+||||+|.....++.+.+.+++++.+++|+.+++.+++++++.|.+.+. ++||++||..+..+.++...|++
T Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~--------~~iv~iss~~~~~~~~~~~~y~~ 152 (242)
T TIGR01829 81 VLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERGW--------GRIINISSVNGQKGQFGQTNYSA 152 (242)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC--------cEEEEEcchhhcCCCCCcchhHH
Confidence 9999999877667778889999999999999999999999999987653 78999999988888888999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhccCCC
Q 025672 172 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAG 248 (249)
Q Consensus 172 sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~a 248 (249)
+|+++..++++++.|+. +.||+++.+.||++.|+.... .. +.....+....|..++.+|+|+++++.||+++++
T Consensus 153 sk~a~~~~~~~la~~~~-~~~i~v~~i~pg~~~t~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~ 226 (242)
T TIGR01829 153 AKAGMIGFTKALAQEGA-TKGVTVNTISPGYIATDMVMA-MR-EDVLNSIVAQIPVGRLGRPEEIAAAVAFLASEEA 226 (242)
T ss_pred HHHHHHHHHHHHHHHhh-hhCeEEEEEeeCCCcCccccc-cc-hHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchh
Confidence 99999999999999997 889999999999999775432 22 3344445556788899999999999999998754
|
(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. |
| >PRK06180 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-36 Score=250.29 Aligned_cols=225 Identities=22% Similarity=0.204 Sum_probs=189.8
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCc
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 90 (249)
.+|+++||||+||||++++++|+++|++|++++|+.++++.+.+. .+.++.++++|++|++++.++++++.+.++++
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~---~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~ 79 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEAL---HPDRALARLLDVTDFDAIDAVVADAEATFGPI 79 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhh---cCCCeeEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 478999999999999999999999999999999998766554432 24568899999999999999999999999999
Q ss_pred cEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhhH
Q 025672 91 DILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVS 170 (249)
Q Consensus 91 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~ 170 (249)
|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|.+++. ++||++||..+..+.++...|+
T Consensus 80 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~--------~~iv~iSS~~~~~~~~~~~~Y~ 151 (277)
T PRK06180 80 DVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRR--------GHIVNITSMGGLITMPGIGYYC 151 (277)
T ss_pred CEEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCC--------CEEEEEecccccCCCCCcchhH
Confidence 99999999877778888899999999999999999999999999987653 7899999999998888999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCC-----ChHHHHH------hhhhhhcccCCCCHHHHHHH
Q 025672 171 AAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL-----APEEIRS------KATDYMAAYKFGEKWDIAMA 239 (249)
Q Consensus 171 ~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~-----~~~~~~~------~~~~~~~~~~~~~~~dva~~ 239 (249)
++|+++++++++++.|++ ++||++++|+||+++|++..... ..++..+ ......+..++.+|+|++++
T Consensus 152 ~sK~a~~~~~~~la~e~~-~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~ 230 (277)
T PRK06180 152 GSKFALEGISESLAKEVA-PFGIHVTAVEPGSFRTDWAGRSMVRTPRSIADYDALFGPIRQAREAKSGKQPGDPAKAAQA 230 (277)
T ss_pred HHHHHHHHHHHHHHHHhh-hhCcEEEEEecCCcccCccccccccCCCCcHhHHHHHHHHHHHHHhhccCCCCCHHHHHHH
Confidence 999999999999999998 88999999999999886432211 1111111 11122344567899999999
Q ss_pred HHHhccCC
Q 025672 240 ALYLASDA 247 (249)
Q Consensus 240 v~~l~s~~ 247 (249)
+++++++.
T Consensus 231 ~~~~l~~~ 238 (277)
T PRK06180 231 ILAAVESD 238 (277)
T ss_pred HHHHHcCC
Confidence 99998754
|
|
| >PRK07832 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-36 Score=250.89 Aligned_cols=225 Identities=20% Similarity=0.247 Sum_probs=190.7
Q ss_pred cEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCC-eeEEEccCCCHHHHHHHHHHHHHHhCCcc
Q 025672 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIP-AIGLEGDVRKREDAVRVVESTINHFGKLD 91 (249)
Q Consensus 13 k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~-~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 91 (249)
|+++||||++|||++++++|+++|++|++++|+.+.+++..+++...+.. +.++.+|++|+++++++++++.+.++++|
T Consensus 1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 80 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSMD 80 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence 57999999999999999999999999999999988888888887655544 45689999999999999999999999999
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhhHH
Q 025672 92 ILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSA 171 (249)
Q Consensus 92 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~~ 171 (249)
++|||+|.....++.+.+.++++..+++|+.+++.++++++|.|.+... +++||++||..+..+.+....|++
T Consensus 81 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~-------~g~ii~isS~~~~~~~~~~~~Y~~ 153 (272)
T PRK07832 81 VVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGR-------GGHLVNVSSAAGLVALPWHAAYSA 153 (272)
T ss_pred EEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCC-------CcEEEEEccccccCCCCCCcchHH
Confidence 9999999877777888999999999999999999999999999976432 378999999988888888899999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCC-----hHHHHHhhhhhhcccCCCCHHHHHHHHHHhccC
Q 025672 172 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA-----PEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246 (249)
Q Consensus 172 sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~ 246 (249)
+|+++.+|+++++.|+. ++||+|+.|+||+++|+....... .++........ ..++..+|+|+|+.++++++.
T Consensus 154 sK~a~~~~~~~l~~e~~-~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~vA~~~~~~~~~ 231 (272)
T PRK07832 154 SKFGLRGLSEVLRFDLA-RHGIGVSVVVPGAVKTPLVNTVEIAGVDREDPRVQKWVDR-FRGHAVTPEKAAEKILAGVEK 231 (272)
T ss_pred HHHHHHHHHHHHHHHhh-hcCcEEEEEecCcccCcchhcccccccCcchhhHHHHHHh-cccCCCCHHHHHHHHHHHHhc
Confidence 99999999999999998 889999999999999875433110 11111222221 245678999999999999853
|
|
| >PRK05854 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-36 Score=255.31 Aligned_cols=236 Identities=20% Similarity=0.217 Sum_probs=186.3
Q ss_pred CCCC--CCCCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhc--CCCeeEEEccCCCHHHH
Q 025672 1 MESP--FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDA 76 (249)
Q Consensus 1 ~~~~--~~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~ 76 (249)
|++| .+..++++|+++||||++|||++++++|+++|++|++++|+.++.++..+++... +.++.+++||++|.+++
T Consensus 1 ~~~~~~~~~~~l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv 80 (313)
T PRK05854 1 MRKPLDITVPDLSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASV 80 (313)
T ss_pred CCCCccccCcccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHH
Confidence 4444 3445688999999999999999999999999999999999999888888887543 34688999999999999
Q ss_pred HHHHHHHHHHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecc
Q 025672 77 VRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISA 156 (249)
Q Consensus 77 ~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss 156 (249)
+++++++.+.++++|++|||||.... +..+.+.++++.++++|+.+++.+++.++|.|.+. .++||++||
T Consensus 81 ~~~~~~~~~~~~~iD~li~nAG~~~~-~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~---------~~riv~vsS 150 (313)
T PRK05854 81 AALGEQLRAEGRPIHLLINNAGVMTP-PERQTTADGFELQFGTNHLGHFALTAHLLPLLRAG---------RARVTSQSS 150 (313)
T ss_pred HHHHHHHHHhCCCccEEEECCccccC-CccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhC---------CCCeEEEec
Confidence 99999999999999999999997653 33456788999999999999999999999999764 278999999
Q ss_pred cccccc------------CccchhhHHHHHHHHHHHHHHHHHhc-CCCCeEEEEEecCccccccccCCCC----hHHHHH
Q 025672 157 TLHYTA------------TWYQIHVSAAKAAVDSITRSLALEWG-TDYAIRVNGIAPGPIKDTAGVSKLA----PEEIRS 219 (249)
Q Consensus 157 ~~~~~~------------~~~~~~y~~sK~a~~~l~~~la~e~~-~~~gi~v~~v~pG~v~t~~~~~~~~----~~~~~~ 219 (249)
..+..+ +++...|+.||+|+..|++.|++++. .+.||+||+|+||++.|++...... ...+..
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~ 230 (313)
T PRK05854 151 IAARRGAINWDDLNWERSYAGMRAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPTNLLAARPEVGRDKDTLMV 230 (313)
T ss_pred hhhcCCCcCcccccccccCcchhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceeccCccccccccccchhHHHH
Confidence 876543 24567899999999999999998642 1578999999999999875432211 011111
Q ss_pred hhhhhh-ccc-CCCCHHHHHHHHHHhccC
Q 025672 220 KATDYM-AAY-KFGEKWDIAMAALYLASD 246 (249)
Q Consensus 220 ~~~~~~-~~~-~~~~~~dva~~v~~l~s~ 246 (249)
.+.... ... ...++++.+...+|++.+
T Consensus 231 ~~~~~~~~~~~~~~~~~~ga~~~l~~a~~ 259 (313)
T PRK05854 231 RLIRSLSARGFLVGTVESAILPALYAATS 259 (313)
T ss_pred HHHHHHhhcccccCCHHHHHHHhhheeeC
Confidence 111111 111 245789999999998853
|
|
| >TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-36 Score=275.89 Aligned_cols=234 Identities=27% Similarity=0.373 Sum_probs=200.9
Q ss_pred CCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhc-C-CCeeEEEccCCCHHHHHHHHHHHH
Q 025672 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL-G-IPAIGLEGDVRKREDAVRVVESTI 84 (249)
Q Consensus 7 ~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~-~-~~~~~~~~Dl~~~~~~~~~~~~~~ 84 (249)
...+++|++|||||++|||++++++|+++|++|++++|+.+.++...+++... + .++.++++|++|+++++++++++.
T Consensus 409 ~~~l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~ 488 (676)
T TIGR02632 409 EKTLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVA 488 (676)
T ss_pred CcCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHH
Confidence 34578999999999999999999999999999999999988888777777532 2 367889999999999999999999
Q ss_pred HHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCc
Q 025672 85 NHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW 164 (249)
Q Consensus 85 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~ 164 (249)
+.++++|++|||||.....++.+.+.++|+..+++|+.+++.+++.+++.|.++.. +++||++||..+..+.+
T Consensus 489 ~~~g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~-------~g~IV~iSS~~a~~~~~ 561 (676)
T TIGR02632 489 LAYGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGL-------GGNIVFIASKNAVYAGK 561 (676)
T ss_pred HhcCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-------CCEEEEEeChhhcCCCC
Confidence 99999999999999877677888899999999999999999999999999976532 37899999999998988
Q ss_pred cchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccc-cC-C----------CChHHHHHhhhhhhcccCCCC
Q 025672 165 YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAG-VS-K----------LAPEEIRSKATDYMAAYKFGE 232 (249)
Q Consensus 165 ~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~-~~-~----------~~~~~~~~~~~~~~~~~~~~~ 232 (249)
+...|+++|+++++++++++.|++ ++||+||+|+||.|.++.. +. . ...++..+.+....+++++.+
T Consensus 562 ~~~aY~aSKaA~~~l~r~lA~el~-~~gIrVn~V~Pg~V~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~r~v~ 640 (676)
T TIGR02632 562 NASAYSAAKAAEAHLARCLAAEGG-TYGIRVNTVNPDAVLQGSGIWDGEWREERAAAYGIPADELEEHYAKRTLLKRHIF 640 (676)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhc-ccCeEEEEEECCceecCcccccccchhhhhhcccCChHHHHHHHHhcCCcCCCcC
Confidence 999999999999999999999998 8899999999999975321 11 1 112233334556678899999
Q ss_pred HHHHHHHHHHhccCCC
Q 025672 233 KWDIAMAALYLASDAG 248 (249)
Q Consensus 233 ~~dva~~v~~l~s~~a 248 (249)
|+|+|+++.||+++.+
T Consensus 641 peDVA~av~~L~s~~~ 656 (676)
T TIGR02632 641 PADIAEAVFFLASSKS 656 (676)
T ss_pred HHHHHHHHHHHhCCcc
Confidence 9999999999998653
|
|
| >PRK06196 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-36 Score=255.24 Aligned_cols=225 Identities=22% Similarity=0.249 Sum_probs=182.7
Q ss_pred CCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHH
Q 025672 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (249)
Q Consensus 7 ~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 86 (249)
..++++|+++||||++|||++++++|+++|++|++++|+.++.++..+++. .+.++++|++|.++++++++++.+.
T Consensus 21 ~~~l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~----~v~~~~~Dl~d~~~v~~~~~~~~~~ 96 (315)
T PRK06196 21 GHDLSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGID----GVEVVMLDLADLESVRAFAERFLDS 96 (315)
T ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhh----hCeEEEccCCCHHHHHHHHHHHHhc
Confidence 346789999999999999999999999999999999999888777776663 3788999999999999999999998
Q ss_pred hCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc-----
Q 025672 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT----- 161 (249)
Q Consensus 87 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~----- 161 (249)
++++|+||||||.... ..+.+.++|+..+++|+.+++.++++++|.|.+.. +++||++||..+..
T Consensus 97 ~~~iD~li~nAg~~~~--~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~--------~~~iV~vSS~~~~~~~~~~ 166 (315)
T PRK06196 97 GRRIDILINNAGVMAC--PETRVGDGWEAQFATNHLGHFALVNLLWPALAAGA--------GARVVALSSAGHRRSPIRW 166 (315)
T ss_pred CCCCCEEEECCCCCCC--CCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcC--------CCeEEEECCHHhccCCCCc
Confidence 9999999999997542 23456788999999999999999999999998764 27899999975432
Q ss_pred -------cCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHH-hhh-hhhccc-CCC
Q 025672 162 -------ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRS-KAT-DYMAAY-KFG 231 (249)
Q Consensus 162 -------~~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~-~~~-~~~~~~-~~~ 231 (249)
+.++...|+.||+++..+++.+++++. ++||++++|+||+++|+........+.... .+. ...++. ++.
T Consensus 167 ~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~-~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (315)
T PRK06196 167 DDPHFTRGYDKWLAYGQSKTANALFAVHLDKLGK-DQGVRAFSVHPGGILTPLQRHLPREEQVALGWVDEHGNPIDPGFK 245 (315)
T ss_pred cccCccCCCChHHHHHHHHHHHHHHHHHHHHHhc-CCCcEEEEeeCCcccCCccccCChhhhhhhhhhhhhhhhhhhhcC
Confidence 234567899999999999999999998 889999999999999876432221111111 111 112332 578
Q ss_pred CHHHHHHHHHHhccC
Q 025672 232 EKWDIAMAALYLASD 246 (249)
Q Consensus 232 ~~~dva~~v~~l~s~ 246 (249)
+|+|+|.+++||++.
T Consensus 246 ~~~~~a~~~~~l~~~ 260 (315)
T PRK06196 246 TPAQGAATQVWAATS 260 (315)
T ss_pred CHhHHHHHHHHHhcC
Confidence 999999999999964
|
|
| >PRK09072 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-36 Score=247.40 Aligned_cols=222 Identities=21% Similarity=0.271 Sum_probs=191.5
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
|++++++++||||++|||++++++|+++|++|++++|+.+.++++..++ ..+.++.++++|++|+++++.+++.+.+ +
T Consensus 1 m~~~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~D~~d~~~~~~~~~~~~~-~ 78 (263)
T PRK09072 1 MDLKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARL-PYPGRHRWVVADLTSEAGREAVLARARE-M 78 (263)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH-hcCCceEEEEccCCCHHHHHHHHHHHHh-c
Confidence 4568999999999999999999999999999999999988888887777 4466899999999999999999998876 7
Q ss_pred CCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch
Q 025672 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 167 (249)
Q Consensus 88 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~ 167 (249)
+++|++|||+|.....++.+.+.+++++.+++|+.+++.+++.++++|.++.. ++||++||..+..+.++..
T Consensus 79 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~--------~~iv~isS~~~~~~~~~~~ 150 (263)
T PRK09072 79 GGINVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPS--------AMVVNVGSTFGSIGYPGYA 150 (263)
T ss_pred CCCCEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCC--------CEEEEecChhhCcCCCCcc
Confidence 89999999999877777888899999999999999999999999999977643 7899999999988888899
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhccCC
Q 025672 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247 (249)
Q Consensus 168 ~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~ 247 (249)
.|+++|+++.+++++++.|+. +.||+|++|+||+++|++..... ...... ...++.+|+|+|+.++++++..
T Consensus 151 ~Y~~sK~a~~~~~~~l~~~~~-~~~i~v~~v~Pg~~~t~~~~~~~------~~~~~~-~~~~~~~~~~va~~i~~~~~~~ 222 (263)
T PRK09072 151 SYCASKFALRGFSEALRRELA-DTGVRVLYLAPRATRTAMNSEAV------QALNRA-LGNAMDDPEDVAAAVLQAIEKE 222 (263)
T ss_pred HHHHHHHHHHHHHHHHHHHhc-ccCcEEEEEecCcccccchhhhc------cccccc-ccCCCCCHHHHHHHHHHHHhCC
Confidence 999999999999999999998 88999999999999976432111 000111 1235789999999999998654
|
|
| >PRK07024 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-36 Score=248.47 Aligned_cols=213 Identities=21% Similarity=0.227 Sum_probs=181.3
Q ss_pred CcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCcc
Q 025672 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD 91 (249)
Q Consensus 12 ~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 91 (249)
+|+++||||++|||++++++|+++|++|++++|+.+++++..+++...+ ++.++.+|++|+++++++++++.+.++++|
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id 80 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAA-RVSVYAADVRDADALAAAAADFIAAHGLPD 80 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCC-eeEEEEcCCCCHHHHHHHHHHHHHhCCCCC
Confidence 4789999999999999999999999999999999888877777665433 789999999999999999999999999999
Q ss_pred EEEEcCCCCCCCCCC-CCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhhH
Q 025672 92 ILVNAAAGNFLVPAE-DLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVS 170 (249)
Q Consensus 92 ~vi~~ag~~~~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~ 170 (249)
++|||+|........ +.+.++++..+++|+.+++.+++.++|.|.+++. ++||++||..+..+.+....|+
T Consensus 81 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~--------~~iv~isS~~~~~~~~~~~~Y~ 152 (257)
T PRK07024 81 VVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAARR--------GTLVGIASVAGVRGLPGAGAYS 152 (257)
T ss_pred EEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCC--------CEEEEEechhhcCCCCCCcchH
Confidence 999999976543333 3678999999999999999999999999977653 8899999999999989999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhccC
Q 025672 171 AAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246 (249)
Q Consensus 171 ~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~ 246 (249)
+||++++.++++++.|+. ++||++++|+||+++|++..... .+.....+|+++++.++..+.+
T Consensus 153 asK~a~~~~~~~l~~e~~-~~gi~v~~v~Pg~v~t~~~~~~~------------~~~~~~~~~~~~a~~~~~~l~~ 215 (257)
T PRK07024 153 ASKAAAIKYLESLRVELR-PAGVRVVTIAPGYIRTPMTAHNP------------YPMPFLMDADRFAARAARAIAR 215 (257)
T ss_pred HHHHHHHHHHHHHHHHhh-ccCcEEEEEecCCCcCchhhcCC------------CCCCCccCHHHHHHHHHHHHhC
Confidence 999999999999999998 88999999999999987432111 0111235677787777776654
|
|
| >PRK06194 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-35 Score=247.65 Aligned_cols=236 Identities=18% Similarity=0.183 Sum_probs=193.4
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhC
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 88 (249)
++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++...+.++.++++|++|.++++++++.+.+.++
T Consensus 3 ~~~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g 82 (287)
T PRK06194 3 DFAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFG 82 (287)
T ss_pred CCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 46789999999999999999999999999999999998888888888876667889999999999999999999999999
Q ss_pred CccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchh
Q 025672 89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH 168 (249)
Q Consensus 89 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~ 168 (249)
++|+||||||.....++.+.+.++|+..+++|+.++++++++++|.|.++..... ...|+||++||..+..+.++...
T Consensus 83 ~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~--~~~g~iv~~sS~~~~~~~~~~~~ 160 (287)
T PRK06194 83 AVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDP--AYEGHIVNTASMAGLLAPPAMGI 160 (287)
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCC--CCCeEEEEeCChhhccCCCCCcc
Confidence 9999999999987777888899999999999999999999999999987643110 11268999999999988888999
Q ss_pred hHHHHHHHHHHHHHHHHHhc-CCCCeEEEEEecCccccccccCCCC-hHH------------HHHhhhhhhcccCCCCHH
Q 025672 169 VSAAKAAVDSITRSLALEWG-TDYAIRVNGIAPGPIKDTAGVSKLA-PEE------------IRSKATDYMAAYKFGEKW 234 (249)
Q Consensus 169 y~~sK~a~~~l~~~la~e~~-~~~gi~v~~v~pG~v~t~~~~~~~~-~~~------------~~~~~~~~~~~~~~~~~~ 234 (249)
|+++|+++++|+++++.|++ ...+|++++++||++.|++...... +.. ...............+++
T Consensus 161 Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 240 (287)
T PRK06194 161 YNVSKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTGIWQSERNRPADLANTAPPTRSQLIAQAMSQKAVGSGKVTAE 240 (287)
T ss_pred hHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCccccccccCchhcccCccccchhhHHHHHHHhhhhccCCCHH
Confidence 99999999999999999986 2357999999999998765432110 100 111111111111236899
Q ss_pred HHHHHHHHhccC
Q 025672 235 DIAMAALYLASD 246 (249)
Q Consensus 235 dva~~v~~l~s~ 246 (249)
|+|+.+..++.+
T Consensus 241 dva~~i~~~~~~ 252 (287)
T PRK06194 241 EVAQLVFDAIRA 252 (287)
T ss_pred HHHHHHHHHHHc
Confidence 999999987753
|
|
| >PRK07775 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-35 Score=244.95 Aligned_cols=229 Identities=22% Similarity=0.290 Sum_probs=193.7
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhC
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 88 (249)
+.++|+++||||+++||++++++|+++|++|++++|+.+.+++..+++...+.++.++++|++|+++++++++++.+.++
T Consensus 7 ~~~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 86 (274)
T PRK07775 7 HPDRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALG 86 (274)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence 46679999999999999999999999999999999998877777777766667788999999999999999999998899
Q ss_pred CccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchh
Q 025672 89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH 168 (249)
Q Consensus 89 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~ 168 (249)
++|++|||||.....+..+.+++++++.+++|+.+++++++++++.+.++.. ++||++||..+..+.++...
T Consensus 87 ~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~--------g~iv~isS~~~~~~~~~~~~ 158 (274)
T PRK07775 87 EIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRR--------GDLIFVGSDVALRQRPHMGA 158 (274)
T ss_pred CCCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC--------ceEEEECChHhcCCCCCcch
Confidence 9999999999876667777888999999999999999999999999976543 78999999988888888889
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHH---HHhhh--hhhcccCCCCHHHHHHHHHHh
Q 025672 169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEI---RSKAT--DYMAAYKFGEKWDIAMAALYL 243 (249)
Q Consensus 169 y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~---~~~~~--~~~~~~~~~~~~dva~~v~~l 243 (249)
|+++|++++++++++++++. +.||++++|+||+++|+...... +... ..... ......++.+++|++++++++
T Consensus 159 Y~~sK~a~~~l~~~~~~~~~-~~gi~v~~v~pG~~~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~~~ 236 (274)
T PRK07775 159 YGAAKAGLEAMVTNLQMELE-GTGVRASIVHPGPTLTGMGWSLP-AEVIGPMLEDWAKWGQARHDYFLRASDLARAITFV 236 (274)
T ss_pred HHHHHHHHHHHHHHHHHHhc-ccCeEEEEEeCCcccCcccccCC-hhhhhHHHHHHHHhcccccccccCHHHHHHHHHHH
Confidence 99999999999999999997 78999999999999877543221 1111 11111 112235688999999999999
Q ss_pred ccCC
Q 025672 244 ASDA 247 (249)
Q Consensus 244 ~s~~ 247 (249)
++..
T Consensus 237 ~~~~ 240 (274)
T PRK07775 237 AETP 240 (274)
T ss_pred hcCC
Confidence 9753
|
|
| >PRK05884 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-36 Score=243.31 Aligned_cols=198 Identities=22% Similarity=0.258 Sum_probs=164.1
Q ss_pred EEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCccEE
Q 025672 14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDIL 93 (249)
Q Consensus 14 ~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~v 93 (249)
+++||||++|||++++++|+++|++|++++|+.+++++..+++ .+.++++|++|+++++++++++.+ ++|++
T Consensus 2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~v~~~~~~~~~---~id~l 73 (223)
T PRK05884 2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKEL-----DVDAIVCDNTDPASLEEARGLFPH---HLDTI 73 (223)
T ss_pred eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc-----cCcEEecCCCCHHHHHHHHHHHhh---cCcEE
Confidence 4899999999999999999999999999999988777766554 356889999999999999887643 69999
Q ss_pred EEcCCCCCC------CCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch
Q 025672 94 VNAAAGNFL------VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 167 (249)
Q Consensus 94 i~~ag~~~~------~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~ 167 (249)
|||+|.... .++.+ +.++|++.+++|+.++++++++++|.|.+ +|+||++||.. .+...
T Consensus 74 v~~ag~~~~~~~~~~~~~~~-~~~~~~~~~~~N~~~~~~~~~~~~~~~~~----------~g~Iv~isS~~----~~~~~ 138 (223)
T PRK05884 74 VNVPAPSWDAGDPRTYSLAD-TANAWRNALDATVLSAVLTVQSVGDHLRS----------GGSIISVVPEN----PPAGS 138 (223)
T ss_pred EECCCccccCCCCcccchhc-CHHHHHHHHHHHHHHHHHHHHHHHHHhhc----------CCeEEEEecCC----CCCcc
Confidence 999985321 12333 46899999999999999999999999964 27899999975 24567
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhccCC
Q 025672 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247 (249)
Q Consensus 168 ~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~ 247 (249)
.|+++|+|+.+|+++++.|++ ++||+||+|+||+++|++... . ...| ..+|+|+++++.||++++
T Consensus 139 ~Y~asKaal~~~~~~la~e~~-~~gI~v~~v~PG~v~t~~~~~----------~-~~~p---~~~~~~ia~~~~~l~s~~ 203 (223)
T PRK05884 139 AEAAIKAALSNWTAGQAAVFG-TRGITINAVACGRSVQPGYDG----------L-SRTP---PPVAAEIARLALFLTTPA 203 (223)
T ss_pred ccHHHHHHHHHHHHHHHHHhh-hcCeEEEEEecCccCchhhhh----------c-cCCC---CCCHHHHHHHHHHHcCch
Confidence 899999999999999999998 899999999999999764211 0 1122 248999999999999987
Q ss_pred CC
Q 025672 248 GQ 249 (249)
Q Consensus 248 a~ 249 (249)
++
T Consensus 204 ~~ 205 (223)
T PRK05884 204 AR 205 (223)
T ss_pred hh
Confidence 53
|
|
| >PRK05993 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-36 Score=248.60 Aligned_cols=220 Identities=22% Similarity=0.229 Sum_probs=182.9
Q ss_pred CcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh-CCc
Q 025672 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF-GKL 90 (249)
Q Consensus 12 ~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~~i 90 (249)
+|+++||||++|||++++++|+++|++|++++|+.+.++.+.+ ..+.++.+|++|.++++.+++++.+.+ +++
T Consensus 4 ~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~~------~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~i 77 (277)
T PRK05993 4 KRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALEA------EGLEAFQLDYAEPESIAALVAQVLELSGGRL 77 (277)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH------CCceEEEccCCCHHHHHHHHHHHHHHcCCCc
Confidence 6899999999999999999999999999999999876655432 247789999999999999999997766 689
Q ss_pred cEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhhH
Q 025672 91 DILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVS 170 (249)
Q Consensus 91 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~ 170 (249)
|++|||||.....++.+.+.++++..+++|+.|++.+++.++|.|.+++. |+||++||..+..+.++...|+
T Consensus 78 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~--------g~iv~isS~~~~~~~~~~~~Y~ 149 (277)
T PRK05993 78 DALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQ--------GRIVQCSSILGLVPMKYRGAYN 149 (277)
T ss_pred cEEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCC--------CEEEEECChhhcCCCCccchHH
Confidence 99999999887788888899999999999999999999999999987653 8899999999998888899999
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCC-------h------HHH---HHhhhh-hhcccCCCCH
Q 025672 171 AAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA-------P------EEI---RSKATD-YMAAYKFGEK 233 (249)
Q Consensus 171 ~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~-------~------~~~---~~~~~~-~~~~~~~~~~ 233 (249)
+||+++++|+++++.|+. ++||+|++|+||+++|++...... . +.. ...... ..+.....+|
T Consensus 150 asK~a~~~~~~~l~~el~-~~gi~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (277)
T PRK05993 150 ASKFAIEGLSLTLRMELQ-GSGIHVSLIEPGPIETRFRANALAAFKRWIDIENSVHRAAYQQQMARLEGGGSKSRFKLGP 228 (277)
T ss_pred HHHHHHHHHHHHHHHHhh-hhCCEEEEEecCCccCchhhHHHHHHhhhhccccchhHHHHHHHHHHHHhhhhccccCCCH
Confidence 999999999999999998 899999999999999875432110 0 000 000111 1112234689
Q ss_pred HHHHHHHHHhccC
Q 025672 234 WDIAMAALYLASD 246 (249)
Q Consensus 234 ~dva~~v~~l~s~ 246 (249)
|++++.++..+..
T Consensus 229 ~~va~~i~~a~~~ 241 (277)
T PRK05993 229 EAVYAVLLHALTA 241 (277)
T ss_pred HHHHHHHHHHHcC
Confidence 9999999988754
|
|
| >PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-36 Score=243.87 Aligned_cols=231 Identities=24% Similarity=0.306 Sum_probs=192.9
Q ss_pred CcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCc-chHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCc
Q 025672 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK-TVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (249)
Q Consensus 12 ~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 90 (249)
.|+++||||++|||++++++|+++|++|++++|+. +..++..+.+...+.++.++++|++|+++++++++++.+.++++
T Consensus 2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 81 (256)
T PRK12745 2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGRI 81 (256)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence 48999999999999999999999999999999864 34556666666556789999999999999999999999999999
Q ss_pred cEEEEcCCCCC--CCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchh
Q 025672 91 DILVNAAAGNF--LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH 168 (249)
Q Consensus 91 d~vi~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~ 168 (249)
|++|||+|... ..++.+.+.++++..+++|+.+++.+++++.+.|.++..... ...++||++||..+..+.++...
T Consensus 82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~--~~~~~iv~~sS~~~~~~~~~~~~ 159 (256)
T PRK12745 82 DCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEE--LPHRSIVFVSSVNAIMVSPNRGE 159 (256)
T ss_pred CEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCC--CCCcEEEEECChhhccCCCCCcc
Confidence 99999999754 356777888999999999999999999999999986542110 01367999999999888888899
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhh-hhhcccCCCCHHHHHHHHHHhccCC
Q 025672 169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKAT-DYMAAYKFGEKWDIAMAALYLASDA 247 (249)
Q Consensus 169 y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~dva~~v~~l~s~~ 247 (249)
|+.+|++++++++.++.|+. ++||+++.|+||+++|+...... +.....+. ...|..++.+++|+++++.+|+++.
T Consensus 160 Y~~sK~a~~~~~~~l~~~~~-~~gi~v~~i~pg~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~d~a~~i~~l~~~~ 236 (256)
T PRK12745 160 YCISKAGLSMAAQLFAARLA-EEGIGVYEVRPGLIKTDMTAPVT--AKYDALIAKGLVPMPRWGEPEDVARAVAALASGD 236 (256)
T ss_pred cHHHHHHHHHHHHHHHHHHH-HhCCEEEEEecCCCcCccccccc--hhHHhhhhhcCCCcCCCcCHHHHHHHHHHHhCCc
Confidence 99999999999999999998 88999999999999976543221 22222222 2457788999999999999999875
|
|
| >PRK06914 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-35 Score=246.53 Aligned_cols=228 Identities=23% Similarity=0.274 Sum_probs=193.3
Q ss_pred CCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhc--CCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 10 l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
+++|++|||||+|+||++++++|+++|++|++++|+.+..+.+.+++... +.++.++.+|++|+++++. ++++.+.+
T Consensus 1 ~~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~~ 79 (280)
T PRK06914 1 MNKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKEI 79 (280)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHhc
Confidence 35789999999999999999999999999999999988887777766543 3578999999999999999 99998889
Q ss_pred CCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch
Q 025672 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 167 (249)
Q Consensus 88 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~ 167 (249)
+++|++|||+|......+.+.+.+++++.+++|+.+++.+++.++|.|.+.+. ++||++||..+..+.++..
T Consensus 80 ~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--------~~iv~vsS~~~~~~~~~~~ 151 (280)
T PRK06914 80 GRIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKS--------GKIINISSISGRVGFPGLS 151 (280)
T ss_pred CCeeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC--------CEEEEECcccccCCCCCCc
Confidence 99999999999877777778889999999999999999999999999976643 7899999998888888899
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCC-----------hHHHHHhhhhh--hcccCCCCHH
Q 025672 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA-----------PEEIRSKATDY--MAAYKFGEKW 234 (249)
Q Consensus 168 ~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~-----------~~~~~~~~~~~--~~~~~~~~~~ 234 (249)
.|+++|+++++|+++++.|+. ++||+++.|+||+++|+....... ........... .+..++.+++
T Consensus 152 ~Y~~sK~~~~~~~~~l~~~~~-~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (280)
T PRK06914 152 PYVSSKYALEGFSESLRLELK-PFGIDVALIEPGSYNTNIWEVGKQLAENQSETTSPYKEYMKKIQKHINSGSDTFGNPI 230 (280)
T ss_pred hhHHhHHHHHHHHHHHHHHhh-hhCCEEEEEecCCcccchhhccccccccccccccchHHHHHHHHHHHhhhhhccCCHH
Confidence 999999999999999999998 889999999999999875432110 01111111121 2356788999
Q ss_pred HHHHHHHHhccCC
Q 025672 235 DIAMAALYLASDA 247 (249)
Q Consensus 235 dva~~v~~l~s~~ 247 (249)
|+|+++++++++.
T Consensus 231 dva~~~~~~~~~~ 243 (280)
T PRK06914 231 DVANLIVEIAESK 243 (280)
T ss_pred HHHHHHHHHHcCC
Confidence 9999999999865
|
|
| >TIGR01289 LPOR light-dependent protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-36 Score=250.93 Aligned_cols=230 Identities=17% Similarity=0.149 Sum_probs=182.6
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcC-CeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCC
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHG-AAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK 89 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G-~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 89 (249)
.+|+++||||++|||++++++|+++| ++|++++|+.++++++.+++...+.++.++.+|++|.++++++++++.+.+++
T Consensus 2 ~~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~ 81 (314)
T TIGR01289 2 QKPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGRP 81 (314)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence 47899999999999999999999999 99999999998888888887655567889999999999999999999888899
Q ss_pred ccEEEEcCCCCCC-CCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc------
Q 025672 90 LDILVNAAAGNFL-VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA------ 162 (249)
Q Consensus 90 id~vi~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~------ 162 (249)
+|++|||||+... .+..+.+.++|+.++++|+.+++.+++.++|.|.++.. ..|+||++||..+...
T Consensus 82 iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~------~~g~IV~vsS~~~~~~~~~~~~ 155 (314)
T TIGR01289 82 LDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPN------KDKRLIIVGSITGNTNTLAGNV 155 (314)
T ss_pred CCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCC------CCCeEEEEecCccccccCCCcC
Confidence 9999999997543 23346688999999999999999999999999976531 1278999999866321
Q ss_pred ---------------------------CccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcc-ccccccCCCCh
Q 025672 163 ---------------------------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPI-KDTAGVSKLAP 214 (249)
Q Consensus 163 ---------------------------~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v-~t~~~~~~~~~ 214 (249)
..+..+|++||+|+..+++.+++++..+.||+|++|+||+| .|++.......
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~T~l~~~~~~~ 235 (314)
T TIGR01289 156 PPKANLGDLSGLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVRELHRRFHDETGITFASLYPGCIADTGLFREHVPL 235 (314)
T ss_pred CCcccccccccccccCCCcccccCCCCcchhhhHHHhHHHHHHHHHHHHHHhccCCCeEEEEecCCcccCCcccccccHH
Confidence 12456799999999999999999985246899999999999 56654322211
Q ss_pred HH-HHHhhhhhhcccCCCCHHHHHHHHHHhccCC
Q 025672 215 EE-IRSKATDYMAAYKFGEKWDIAMAALYLASDA 247 (249)
Q Consensus 215 ~~-~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~ 247 (249)
.. ....+. ......+.++++.++.+++++.+.
T Consensus 236 ~~~~~~~~~-~~~~~~~~~~~~~a~~l~~~~~~~ 268 (314)
T TIGR01289 236 FRTLFPPFQ-KYITKGYVSEEEAGERLAQVVSDP 268 (314)
T ss_pred HHHHHHHHH-HHHhccccchhhhhhhhHHhhcCc
Confidence 10 011111 112234678999999999987653
|
This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form. |
| >PLN02780 ketoreductase/ oxidoreductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-36 Score=252.23 Aligned_cols=188 Identities=21% Similarity=0.264 Sum_probs=161.0
Q ss_pred CCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhc--CCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 10 l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
..|++++||||++|||+++|++|+++|++|++++|+.++++++.+++... +.++..+.+|+++ ++.+.++++.+.+
T Consensus 51 ~~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~--~~~~~~~~l~~~~ 128 (320)
T PLN02780 51 KYGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSG--DIDEGVKRIKETI 128 (320)
T ss_pred ccCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCC--CcHHHHHHHHHHh
Confidence 35899999999999999999999999999999999999999998888653 3467889999995 2333444444444
Q ss_pred C--CccEEEEcCCCCCC--CCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc-c
Q 025672 88 G--KLDILVNAAAGNFL--VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT-A 162 (249)
Q Consensus 88 ~--~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~-~ 162 (249)
+ ++|++|||||.... .++.+.+.+++++.+++|+.+++.++++++|.|.+++. |+||++||..+.. +
T Consensus 129 ~~~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~--------g~IV~iSS~a~~~~~ 200 (320)
T PLN02780 129 EGLDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKK--------GAIINIGSGAAIVIP 200 (320)
T ss_pred cCCCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCC--------cEEEEEechhhccCC
Confidence 4 46699999998643 46778899999999999999999999999999987653 8999999998864 3
Q ss_pred -CccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccc
Q 025672 163 -TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAG 208 (249)
Q Consensus 163 -~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~ 208 (249)
.+....|++||+++++|+++|+.|++ ++||+|++|+||+|+|++.
T Consensus 201 ~~p~~~~Y~aSKaal~~~~~~L~~El~-~~gI~V~~v~PG~v~T~~~ 246 (320)
T PLN02780 201 SDPLYAVYAATKAYIDQFSRCLYVEYK-KSGIDVQCQVPLYVATKMA 246 (320)
T ss_pred CCccchHHHHHHHHHHHHHHHHHHHHh-ccCeEEEEEeeCceecCcc
Confidence 57789999999999999999999998 8999999999999998754
|
|
| >PRK07060 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-35 Score=241.23 Aligned_cols=224 Identities=28% Similarity=0.367 Sum_probs=190.3
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
+++++|+++|||++++||+++++.|+++|++|++++|+.++++++.++. .+.++.+|+++.++++++++. +
T Consensus 5 ~~~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~v~~~~~~----~ 75 (245)
T PRK07060 5 FDFSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGET-----GCEPLRLDVGDDAAIRAALAA----A 75 (245)
T ss_pred cccCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCeEEEecCCCHHHHHHHHHH----h
Confidence 4578999999999999999999999999999999999987766555443 356788999999998888765 4
Q ss_pred CCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch
Q 025672 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 167 (249)
Q Consensus 88 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~ 167 (249)
+++|+||||+|.....+..+.+.+++++.+++|+.+++.+++++++.+.++.. .++||++||..+..+.++..
T Consensus 76 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-------~~~iv~~sS~~~~~~~~~~~ 148 (245)
T PRK07060 76 GAFDGLVNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGR-------GGSIVNVSSQAALVGLPDHL 148 (245)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCC-------CcEEEEEccHHHcCCCCCCc
Confidence 78999999999877666777888999999999999999999999999875431 37899999999988888899
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhccCC
Q 025672 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247 (249)
Q Consensus 168 ~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~ 247 (249)
.|+.+|++++.+++.++.++. +.||++++|+||++.|+..............+....|.+++.+++|+++++.+|+++.
T Consensus 149 ~y~~sK~a~~~~~~~~a~~~~-~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~ 227 (245)
T PRK07060 149 AYCASKAALDAITRVLCVELG-PHGIRVNSVNPTVTLTPMAAEAWSDPQKSGPMLAAIPLGRFAEVDDVAAPILFLLSDA 227 (245)
T ss_pred HhHHHHHHHHHHHHHHHHHHh-hhCeEEEEEeeCCCCCchhhhhccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCcc
Confidence 999999999999999999997 7899999999999998764433333333444555677889999999999999999876
Q ss_pred C
Q 025672 248 G 248 (249)
Q Consensus 248 a 248 (249)
+
T Consensus 228 ~ 228 (245)
T PRK07060 228 A 228 (245)
T ss_pred c
Confidence 4
|
|
| >PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-35 Score=239.99 Aligned_cols=229 Identities=32% Similarity=0.474 Sum_probs=198.9
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEE-eCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIM-GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~-~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
.+.+|++|||||+++||.+++++|+++|++|+++ +|+.+..+.+.+.+...+.++.++.+|++|+++++++++++.+.+
T Consensus 2 ~~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 81 (247)
T PRK05565 2 KLMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKF 81 (247)
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence 4678999999999999999999999999999998 999888888887776666778999999999999999999999999
Q ss_pred CCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch
Q 025672 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 167 (249)
Q Consensus 88 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~ 167 (249)
+++|+|||++|.....++.+.+.+++++.+++|+.+++.+++.+.+.+.+++. +++|++||..+..+.+...
T Consensus 82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--------~~~v~~sS~~~~~~~~~~~ 153 (247)
T PRK05565 82 GKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKS--------GVIVNISSIWGLIGASCEV 153 (247)
T ss_pred CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC--------cEEEEECCHhhccCCCCcc
Confidence 99999999999876667778889999999999999999999999999977643 7899999999888888899
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhccCC
Q 025672 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247 (249)
Q Consensus 168 ~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~ 247 (249)
.|+.+|+++..+++.++.++. +.||++++|+||+++|+.... ..+. .........+..+..+++|+++.+.+|+++.
T Consensus 154 ~y~~sK~a~~~~~~~~~~~~~-~~gi~~~~v~pg~v~t~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~ 230 (247)
T PRK05565 154 LYSASKGAVNAFTKALAKELA-PSGIRVNAVAPGAIDTEMWSS-FSEE-DKEGLAEEIPLGRLGKPEEIAKVVLFLASDD 230 (247)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HcCeEEEEEEECCccCccccc-cChH-HHHHHHhcCCCCCCCCHHHHHHHHHHHcCCc
Confidence 999999999999999999998 889999999999998765432 2222 2222333456677889999999999999875
Q ss_pred C
Q 025672 248 G 248 (249)
Q Consensus 248 a 248 (249)
+
T Consensus 231 ~ 231 (247)
T PRK05565 231 A 231 (247)
T ss_pred c
Confidence 4
|
|
| >PRK10538 malonic semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-35 Score=241.29 Aligned_cols=220 Identities=24% Similarity=0.259 Sum_probs=184.9
Q ss_pred cEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCccE
Q 025672 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI 92 (249)
Q Consensus 13 k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ 92 (249)
++++||||+||||.++++.|+++|++|++++|+.++++.+.+.+ +.++.++.+|++|.++++.+++++.+.++++|+
T Consensus 1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~ 77 (248)
T PRK10538 1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL---GDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDV 77 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---ccceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 46899999999999999999999999999999988777666554 346889999999999999999999999999999
Q ss_pred EEEcCCCCC-CCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhhHH
Q 025672 93 LVNAAAGNF-LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSA 171 (249)
Q Consensus 93 vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~~ 171 (249)
+|||+|... ..++.+.+.+++++.+++|+.+++.+++.+++.|.+.+. ++||++||..+..+.++...|++
T Consensus 78 vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--------~~iv~isS~~~~~~~~~~~~Y~~ 149 (248)
T PRK10538 78 LVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNH--------GHIINIGSTAGSWPYAGGNVYGA 149 (248)
T ss_pred EEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC--------cEEEEECCcccCCCCCCCchhHH
Confidence 999999753 356677889999999999999999999999999987643 78999999988888888899999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCC-C-ChHHHHHhhhhhhcccCCCCHHHHHHHHHHhccCC
Q 025672 172 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK-L-APEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247 (249)
Q Consensus 172 sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~ 247 (249)
+|++++++++.++.|+. ++||++++|.||++.++++... . ..+... ........+.+|+|+|++++||++..
T Consensus 150 sK~~~~~~~~~l~~~~~-~~~i~v~~v~pg~i~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~dvA~~~~~l~~~~ 223 (248)
T PRK10538 150 TKAFVRQFSLNLRTDLH-GTAVRVTDIEPGLVGGTEFSNVRFKGDDGKA---EKTYQNTVALTPEDVSEAVWWVATLP 223 (248)
T ss_pred HHHHHHHHHHHHHHHhc-CCCcEEEEEeCCeecccccchhhccCcHHHH---HhhccccCCCCHHHHHHHHHHHhcCC
Confidence 99999999999999998 8899999999999985554321 1 111111 11111234579999999999999754
|
|
| >PRK12827 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-35 Score=240.10 Aligned_cols=226 Identities=28% Similarity=0.434 Sum_probs=193.0
Q ss_pred CCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeC----CcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHH
Q 025672 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGR----RKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN 85 (249)
Q Consensus 10 l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r----~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 85 (249)
+++++++||||++|||++++++|+++|++|++++| +.+..+.+.+++...+.++.++.+|++|+++++++++++.+
T Consensus 4 ~~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 83 (249)
T PRK12827 4 LDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGVE 83 (249)
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 56899999999999999999999999999998765 34445556666666677899999999999999999999999
Q ss_pred HhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHH-HHHHhcCCCCCCCCCCceEEEeccccccccCc
Q 025672 86 HFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEAL-KYLKKGGRGQASSSSGGIIINISATLHYTATW 164 (249)
Q Consensus 86 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~-~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~ 164 (249)
.++++|+||||+|.....++.+.+.++|+..+++|+.+++.+++++. +.+.+.. .++||++||..+..+.+
T Consensus 84 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--------~~~iv~~sS~~~~~~~~ 155 (249)
T PRK12827 84 EFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARR--------GGRIVNIASVAGVRGNR 155 (249)
T ss_pred HhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCC--------CeEEEEECCchhcCCCC
Confidence 88999999999998877788888999999999999999999999999 5555443 37899999999988888
Q ss_pred cchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhc
Q 025672 165 YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLA 244 (249)
Q Consensus 165 ~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~ 244 (249)
+...|+.+|++++.++++++.++. +.||+++.|+||+++|+...... + .+......+..++.+++|+++.+.||+
T Consensus 156 ~~~~y~~sK~a~~~~~~~l~~~~~-~~~i~~~~i~pg~v~t~~~~~~~-~---~~~~~~~~~~~~~~~~~~va~~~~~l~ 230 (249)
T PRK12827 156 GQVNYAASKAGLIGLTKTLANELA-PRGITVNAVAPGAINTPMADNAA-P---TEHLLNPVPVQRLGEPDEVAALVAFLV 230 (249)
T ss_pred CCchhHHHHHHHHHHHHHHHHHhh-hhCcEEEEEEECCcCCCcccccc-h---HHHHHhhCCCcCCcCHHHHHHHHHHHc
Confidence 899999999999999999999997 78999999999999987543322 1 133344566777889999999999999
Q ss_pred cCCC
Q 025672 245 SDAG 248 (249)
Q Consensus 245 s~~a 248 (249)
++.+
T Consensus 231 ~~~~ 234 (249)
T PRK12827 231 SDAA 234 (249)
T ss_pred Cccc
Confidence 7653
|
|
| >PRK06179 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-36 Score=245.98 Aligned_cols=220 Identities=26% Similarity=0.288 Sum_probs=186.3
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCc
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 90 (249)
++++++||||+||||++++++|+++|++|++++|+.+..+. ..++.++++|++|+++++++++++.+.++++
T Consensus 3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~--------~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~ 74 (270)
T PRK06179 3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAP--------IPGVELLELDVTDDASVQAAVDEVIARAGRI 74 (270)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc--------cCCCeeEEeecCCHHHHHHHHHHHHHhCCCC
Confidence 57899999999999999999999999999999998654321 2357899999999999999999999999999
Q ss_pred cEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhhH
Q 025672 91 DILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVS 170 (249)
Q Consensus 91 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~ 170 (249)
|+||||+|.....++.+.+.+++++.+++|+.+++.+++.++|.|.+++. ++||++||..+..+.+....|+
T Consensus 75 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~--------~~iv~isS~~~~~~~~~~~~Y~ 146 (270)
T PRK06179 75 DVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGS--------GRIINISSVLGFLPAPYMALYA 146 (270)
T ss_pred CEEEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC--------ceEEEECCccccCCCCCccHHH
Confidence 99999999887778888899999999999999999999999999987653 8899999999998888899999
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCCh----H---HHHHhhhh--hhcccCCCCHHHHHHHHH
Q 025672 171 AAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP----E---EIRSKATD--YMAAYKFGEKWDIAMAAL 241 (249)
Q Consensus 171 ~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~----~---~~~~~~~~--~~~~~~~~~~~dva~~v~ 241 (249)
++|+++.+++++++.|++ ++||+++.|+||+++|+........ . ........ ..+..+..+|+++++.++
T Consensus 147 ~sK~a~~~~~~~l~~el~-~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~ 225 (270)
T PRK06179 147 ASKHAVEGYSESLDHEVR-QFGIRVSLVEPAYTKTNFDANAPEPDSPLAEYDRERAVVSKAVAKAVKKADAPEVVADTVV 225 (270)
T ss_pred HHHHHHHHHHHHHHHHHh-hhCcEEEEEeCCCcccccccccCCCCCcchhhHHHHHHHHHHHHhccccCCCHHHHHHHHH
Confidence 999999999999999998 8899999999999998754322111 0 00111111 123456789999999999
Q ss_pred HhccCC
Q 025672 242 YLASDA 247 (249)
Q Consensus 242 ~l~s~~ 247 (249)
+++++.
T Consensus 226 ~~~~~~ 231 (270)
T PRK06179 226 KAALGP 231 (270)
T ss_pred HHHcCC
Confidence 998764
|
|
| >PRK07074 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-35 Score=241.50 Aligned_cols=225 Identities=24% Similarity=0.353 Sum_probs=192.1
Q ss_pred CcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCcc
Q 025672 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD 91 (249)
Q Consensus 12 ~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 91 (249)
+|+++||||+++||++++++|+++|++|++++|+.++.+.+.+++. +.++.++++|++|.+++..+++++.+.++++|
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 79 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALG--DARFVPVACDLTDAASLAAALANAAAERGPVD 79 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 5799999999999999999999999999999999888877777663 35688999999999999999999999999999
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhhHH
Q 025672 92 ILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSA 171 (249)
Q Consensus 92 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~~ 171 (249)
++|||+|.....++.+.+.++|...+++|+.+++.+++++++.+.+++. ++||++||..+... .+...|+.
T Consensus 80 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~--------~~iv~~sS~~~~~~-~~~~~y~~ 150 (257)
T PRK07074 80 VLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSR--------GAVVNIGSVNGMAA-LGHPAYSA 150 (257)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCC--------eEEEEEcchhhcCC-CCCcccHH
Confidence 9999999877667778889999999999999999999999999977543 78999999766543 35678999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCC-ChHHHHHhhhhhhcccCCCCHHHHHHHHHHhccCCC
Q 025672 172 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL-APEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAG 248 (249)
Q Consensus 172 sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~a 248 (249)
+|+++++++++++.|++ ++||+|+.++||+++|+...... ..+.+........|..++.+++|+++++.||+++.+
T Consensus 151 sK~a~~~~~~~~a~~~~-~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~ 227 (257)
T PRK07074 151 AKAGLIHYTKLLAVEYG-RFGIRANAVAPGTVKTQAWEARVAANPQVFEELKKWYPLQDFATPDDVANAVLFLASPAA 227 (257)
T ss_pred HHHHHHHHHHHHHHHHh-HhCeEEEEEEeCcCCcchhhcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCchh
Confidence 99999999999999998 88999999999999987643322 123333434445677889999999999999998743
|
|
| >PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-35 Score=239.34 Aligned_cols=221 Identities=26% Similarity=0.347 Sum_probs=193.3
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhC
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 88 (249)
++++|+++|||++++||++++++|+++|++|++++|+.+..++..+++...+.++.++.+|++++++++++++++.+.++
T Consensus 4 ~~~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 83 (239)
T PRK07666 4 SLQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELG 83 (239)
T ss_pred cCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 36789999999999999999999999999999999998888888888876677899999999999999999999999999
Q ss_pred CccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchh
Q 025672 89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH 168 (249)
Q Consensus 89 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~ 168 (249)
++|+||||+|.....++.+.+++++++.+++|+.+++++++++.+.+.++.. +++|++||..+..+.++...
T Consensus 84 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--------~~iv~~ss~~~~~~~~~~~~ 155 (239)
T PRK07666 84 SIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQS--------GDIINISSTAGQKGAAVTSA 155 (239)
T ss_pred CccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCC--------cEEEEEcchhhccCCCCCcc
Confidence 9999999999876667778889999999999999999999999999977643 78999999999988888899
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhccCC
Q 025672 169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247 (249)
Q Consensus 169 y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~ 247 (249)
|+.+|+++..+++.++.|+. +.||+++.|.||++.|++......+ .. ...++.+++|+++.+..+++..
T Consensus 156 Y~~sK~a~~~~~~~~a~e~~-~~gi~v~~v~pg~v~t~~~~~~~~~--------~~-~~~~~~~~~~~a~~~~~~l~~~ 224 (239)
T PRK07666 156 YSASKFGVLGLTESLMQEVR-KHNIRVTALTPSTVATDMAVDLGLT--------DG-NPDKVMQPEDLAEFIVAQLKLN 224 (239)
T ss_pred hHHHHHHHHHHHHHHHHHhh-ccCcEEEEEecCcccCcchhhcccc--------cc-CCCCCCCHHHHHHHHHHHHhCC
Confidence 99999999999999999998 8899999999999987643321100 01 1234678999999999998753
|
|
| >PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-35 Score=239.00 Aligned_cols=229 Identities=30% Similarity=0.396 Sum_probs=200.4
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhC
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 88 (249)
++++|+++||||+++||++++++|+++|++|++++|+.++++...+++...+.++.++.+|++|.++++++++++.+.++
T Consensus 3 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 82 (251)
T PRK12826 3 DLEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFG 82 (251)
T ss_pred CCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhC
Confidence 35789999999999999999999999999999999998888887777776666799999999999999999999999999
Q ss_pred CccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccc-ccCccch
Q 025672 89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY-TATWYQI 167 (249)
Q Consensus 89 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~-~~~~~~~ 167 (249)
++|+||||+|.....++.+.+.+++.+.+++|+.+++.+++.+++.|.+++. ++||++||..+. .+.++..
T Consensus 83 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--------~~ii~~ss~~~~~~~~~~~~ 154 (251)
T PRK12826 83 RLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGG--------GRIVLTSSVAGPRVGYPGLA 154 (251)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCC--------cEEEEEechHhhccCCCCcc
Confidence 9999999999877777778889999999999999999999999999977653 789999999887 7778888
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhccCC
Q 025672 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247 (249)
Q Consensus 168 ~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~ 247 (249)
.|+.+|++++++++.++.++. +.|++++.|.||+++|+...... +..+...+....|+.++.+++|+++++.+|+++.
T Consensus 155 ~y~~sK~a~~~~~~~~~~~~~-~~~i~~~~i~pg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~ 232 (251)
T PRK12826 155 HYAASKAGLVGFTRALALELA-ARNITVNSVHPGGVDTPMAGNLG-DAQWAEAIAAAIPLGRLGEPEDIAAAVLFLASDE 232 (251)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HcCeEEEEEeeCCCCcchhhhcC-chHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcc
Confidence 999999999999999999997 78999999999999977543322 2222334455677788999999999999999764
|
|
| >PRK07904 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-35 Score=241.85 Aligned_cols=214 Identities=19% Similarity=0.178 Sum_probs=179.1
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcC-CeEEEEeCCcch-HHHHHHHHHhcCC-CeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHG-AAIAIMGRRKTV-LRSAVAALHSLGI-PAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G-~~v~l~~r~~~~-~~~~~~~~~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
.+|+++||||++|||+++|++|+++| ++|++++|+.+. ++++.+++...+. +++++++|++|+++++++++++.+ +
T Consensus 7 ~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~-~ 85 (253)
T PRK07904 7 NPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFA-G 85 (253)
T ss_pred CCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHh-c
Confidence 47899999999999999999999995 899999999886 8888888876543 789999999999999999998876 5
Q ss_pred CCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch
Q 025672 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 167 (249)
Q Consensus 88 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~ 167 (249)
+++|++|||+|..........+.+++.+++++|+.+++.+++.++|.|.+++. ++||++||..+..+.++..
T Consensus 86 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~--------~~iv~isS~~g~~~~~~~~ 157 (253)
T PRK07904 86 GDVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGF--------GQIIAMSSVAGERVRRSNF 157 (253)
T ss_pred CCCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCC--------ceEEEEechhhcCCCCCCc
Confidence 89999999999754322122245566788999999999999999999987653 8899999998877777888
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhccCC
Q 025672 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247 (249)
Q Consensus 168 ~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~ 247 (249)
.|++||+++.+|+++++.|+. ++||+|+.|+||+++|++..... +.....+|+|+|+.++..+++.
T Consensus 158 ~Y~~sKaa~~~~~~~l~~el~-~~~i~v~~v~Pg~v~t~~~~~~~-------------~~~~~~~~~~~A~~i~~~~~~~ 223 (253)
T PRK07904 158 VYGSTKAGLDGFYLGLGEALR-EYGVRVLVVRPGQVRTRMSAHAK-------------EAPLTVDKEDVAKLAVTAVAKG 223 (253)
T ss_pred chHHHHHHHHHHHHHHHHHHh-hcCCEEEEEeeCceecchhccCC-------------CCCCCCCHHHHHHHHHHHHHcC
Confidence 999999999999999999998 88999999999999986443211 0012468999999999888653
|
|
| >PRK08267 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-35 Score=241.92 Aligned_cols=219 Identities=26% Similarity=0.214 Sum_probs=187.5
Q ss_pred cEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHH-hCCcc
Q 025672 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH-FGKLD 91 (249)
Q Consensus 13 k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~~id 91 (249)
|++|||||++|||++++++|+++|++|++++|+.+.++++.+++. +.++.++++|++|.++++++++.+.+. ++++|
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id 79 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELG--AGNAWTGALDVTDRAAWDAALADFAAATGGRLD 79 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHHHcCCCCC
Confidence 789999999999999999999999999999999888887776664 457899999999999999999988776 78999
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhhHH
Q 025672 92 ILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSA 171 (249)
Q Consensus 92 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~~ 171 (249)
+||||||.....++.+.+.++++..+++|+.+++.+++++.+.|...+. ++||++||..+..+.+....|+.
T Consensus 80 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--------~~iv~isS~~~~~~~~~~~~Y~~ 151 (260)
T PRK08267 80 VLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPG--------ARVINTSSASAIYGQPGLAVYSA 151 (260)
T ss_pred EEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCC--------CEEEEeCchhhCcCCCCchhhHH
Confidence 9999999887777888899999999999999999999999999987643 88999999999999888999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhccC
Q 025672 172 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246 (249)
Q Consensus 172 sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~ 246 (249)
||+++++++++++.|+. +.||++++|.||++.|++..... .+ ....... ......+|+|+++++++++..
T Consensus 152 sKaa~~~~~~~l~~~~~-~~~i~v~~i~pg~~~t~~~~~~~-~~-~~~~~~~--~~~~~~~~~~va~~~~~~~~~ 221 (260)
T PRK08267 152 TKFAVRGLTEALDLEWR-RHGIRVADVMPLFVDTAMLDGTS-NE-VDAGSTK--RLGVRLTPEDVAEAVWAAVQH 221 (260)
T ss_pred HHHHHHHHHHHHHHHhc-ccCcEEEEEecCCcCCccccccc-ch-hhhhhHh--hccCCCCHHHHHHHHHHHHhC
Confidence 99999999999999998 88999999999999976544311 11 1111111 123357899999999999853
|
|
| >PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-35 Score=239.65 Aligned_cols=224 Identities=29% Similarity=0.387 Sum_probs=188.9
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCC-cchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHH
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR-KTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~-~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 86 (249)
++++++++|||||+++||++++++|+++|++|++..|+ .+........+...+.++.++.+|++++++++++++++.+.
T Consensus 2 ~~~~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 81 (252)
T PRK06077 2 YSLKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDR 81 (252)
T ss_pred CCCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHH
Confidence 45778999999999999999999999999998887654 44455555566655667889999999999999999999999
Q ss_pred hCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccc
Q 025672 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ 166 (249)
Q Consensus 87 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~ 166 (249)
++++|+||||+|.....++.+.+.+.+++.+++|+.+++.+++++.+.+.+. ++||++||..+..+.++.
T Consensus 82 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~----------~~iv~~sS~~~~~~~~~~ 151 (252)
T PRK06077 82 YGVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREG----------GAIVNIASVAGIRPAYGL 151 (252)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcC----------cEEEEEcchhccCCCCCc
Confidence 9999999999998777777788888999999999999999999999998653 789999999999898999
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCC-----ChHHHHHhhhhhhcccCCCCHHHHHHHHH
Q 025672 167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL-----APEEIRSKATDYMAAYKFGEKWDIAMAAL 241 (249)
Q Consensus 167 ~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~dva~~v~ 241 (249)
..|+++|++++++++++++|++ + +|+++.|.||+++|++..... ..+... ....+.+++.+|+|+|+++.
T Consensus 152 ~~Y~~sK~~~~~~~~~l~~~~~-~-~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~dva~~~~ 226 (252)
T PRK06077 152 SIYGAMKAAVINLTKYLALELA-P-KIRVNAIAPGFVKTKLGESLFKVLGMSEKEFA---EKFTLMGKILDPEEVAEFVA 226 (252)
T ss_pred hHHHHHHHHHHHHHHHHHHHHh-c-CCEEEEEeeCCccChHHHhhhhcccccHHHHH---HhcCcCCCCCCHHHHHHHHH
Confidence 9999999999999999999997 6 999999999999977542211 111111 22334567899999999999
Q ss_pred HhccC
Q 025672 242 YLASD 246 (249)
Q Consensus 242 ~l~s~ 246 (249)
++++.
T Consensus 227 ~~~~~ 231 (252)
T PRK06077 227 AILKI 231 (252)
T ss_pred HHhCc
Confidence 99963
|
|
| >PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-35 Score=236.16 Aligned_cols=229 Identities=32% Similarity=0.411 Sum_probs=197.1
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcc-hHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHH
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT-VLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~-~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 86 (249)
+++++|+++|||++++||++++++|+++|++|+++.|+.. ..+...+++...+.++.++++|+++++++.++++++.+.
T Consensus 1 ~~~~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 80 (248)
T PRK05557 1 MSLEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAE 80 (248)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 3567899999999999999999999999999988887655 355666666656678899999999999999999999999
Q ss_pred hCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccc
Q 025672 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ 166 (249)
Q Consensus 87 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~ 166 (249)
++++|+|||++|.....+..+.+.+.+++.+++|+.+++.+++.+.+.+.+... +++|++||..+..+.++.
T Consensus 81 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--------~~~v~iss~~~~~~~~~~ 152 (248)
T PRK05557 81 FGGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRS--------GRIINISSVVGLMGNPGQ 152 (248)
T ss_pred cCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC--------eEEEEEcccccCcCCCCC
Confidence 999999999999877777777888999999999999999999999999977543 789999999888888889
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhccC
Q 025672 167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246 (249)
Q Consensus 167 ~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~ 246 (249)
..|+.+|++++.+++.+++++. +.||+++.|+||+++|+.... . .+...+......+.+++.+++|+++++.+|+++
T Consensus 153 ~~y~~sk~a~~~~~~~~a~~~~-~~~i~~~~v~pg~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~ 229 (248)
T PRK05557 153 ANYAASKAGVIGFTKSLARELA-SRGITVNAVAPGFIETDMTDA-L-PEDVKEAILAQIPLGRLGQPEEIASAVAFLASD 229 (248)
T ss_pred chhHHHHHHHHHHHHHHHHHhh-hhCeEEEEEecCccCCccccc-c-ChHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCc
Confidence 9999999999999999999997 789999999999998765332 2 233444455566778889999999999999976
Q ss_pred C
Q 025672 247 A 247 (249)
Q Consensus 247 ~ 247 (249)
.
T Consensus 230 ~ 230 (248)
T PRK05557 230 E 230 (248)
T ss_pred c
Confidence 3
|
|
| >PRK09730 putative NAD(P)-binding oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-35 Score=237.57 Aligned_cols=228 Identities=27% Similarity=0.377 Sum_probs=193.0
Q ss_pred cEEEEecCCCchhHHHHHHHHHcCCeEEE-EeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCcc
Q 025672 13 KVALLTGGGSGIGFEISLQLGKHGAAIAI-MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD 91 (249)
Q Consensus 13 k~~lItGa~~giG~~~a~~l~~~G~~v~l-~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 91 (249)
|+++||||+++||++++++|+++|++|++ ..|+.+..++...++...+.++.++++|++|+++++++++++.+.++++|
T Consensus 2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~id 81 (247)
T PRK09730 2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEPLA 81 (247)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCCCCC
Confidence 68999999999999999999999999876 46777777777777776677789999999999999999999999999999
Q ss_pred EEEEcCCCCC-CCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCcc-chhh
Q 025672 92 ILVNAAAGNF-LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY-QIHV 169 (249)
Q Consensus 92 ~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~-~~~y 169 (249)
++|||+|... ..++.+.+.++++..+++|+.+++.+++.+++.+.++.... +|+||++||..+..+.+. ...|
T Consensus 82 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~-----~g~~v~~sS~~~~~~~~~~~~~Y 156 (247)
T PRK09730 82 ALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGS-----GGAIVNVSSAASRLGAPGEYVDY 156 (247)
T ss_pred EEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCC-----CcEEEEECchhhccCCCCcccch
Confidence 9999999763 45667788899999999999999999999999997653211 378999999988777665 4679
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhccCC
Q 025672 170 SAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247 (249)
Q Consensus 170 ~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~ 247 (249)
+++|++++.+++.++.|+. +.||++++|+||+++|+...... .+..........|+.+..+++|+++++.|++++.
T Consensus 157 ~~sK~~~~~~~~~l~~~~~-~~~i~v~~i~pg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~ 232 (247)
T PRK09730 157 AASKGAIDTLTTGLSLEVA-AQGIRVNCVRPGFIYTEMHASGG-EPGRVDRVKSNIPMQRGGQPEEVAQAIVWLLSDK 232 (247)
T ss_pred HhHHHHHHHHHHHHHHHHH-HhCeEEEEEEeCCCcCcccccCC-CHHHHHHHHhcCCCCCCcCHHHHHHHHHhhcChh
Confidence 9999999999999999998 88999999999999987543322 2333344455667788889999999999999875
|
|
| >PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-35 Score=237.69 Aligned_cols=223 Identities=25% Similarity=0.361 Sum_probs=191.7
Q ss_pred CCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcC-CCeeEEEccCC--CHHHHHHHHHHH
Q 025672 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG-IPAIGLEGDVR--KREDAVRVVEST 83 (249)
Q Consensus 7 ~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dl~--~~~~~~~~~~~~ 83 (249)
...+++|+++|||++++||.+++++|+++|++|++++|+.+.++++.+++...+ .++.++.+|++ ++++++++++.+
T Consensus 7 ~~~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 86 (247)
T PRK08945 7 PDLLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTI 86 (247)
T ss_pred ccccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHH
Confidence 345789999999999999999999999999999999999988888877776543 46777888886 789999999999
Q ss_pred HHHhCCccEEEEcCCCCC-CCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc
Q 025672 84 INHFGKLDILVNAAAGNF-LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 162 (249)
Q Consensus 84 ~~~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~ 162 (249)
.+.++++|+||||||... ..++.+.+.++|++.+++|+.++++++++++++|.++.. ++||++||..+..+
T Consensus 87 ~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~--------~~iv~~ss~~~~~~ 158 (247)
T PRK08945 87 EEQFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPA--------ASLVFTSSSVGRQG 158 (247)
T ss_pred HHHhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCC--------CEEEEEccHhhcCC
Confidence 999999999999999754 356777888999999999999999999999999987653 78999999998888
Q ss_pred CccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHH
Q 025672 163 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALY 242 (249)
Q Consensus 163 ~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~ 242 (249)
.++...|+++|++++++++.++.++. ..||++++|+||++.|++....... ....++.+|+|+++++.|
T Consensus 159 ~~~~~~Y~~sK~a~~~~~~~~~~~~~-~~~i~~~~v~pg~v~t~~~~~~~~~----------~~~~~~~~~~~~~~~~~~ 227 (247)
T PRK08945 159 RANWGAYAVSKFATEGMMQVLADEYQ-GTNLRVNCINPGGTRTAMRASAFPG----------EDPQKLKTPEDIMPLYLY 227 (247)
T ss_pred CCCCcccHHHHHHHHHHHHHHHHHhc-ccCEEEEEEecCCccCcchhhhcCc----------ccccCCCCHHHHHHHHHH
Confidence 88899999999999999999999997 7899999999999987632211111 112457899999999999
Q ss_pred hccCCC
Q 025672 243 LASDAG 248 (249)
Q Consensus 243 l~s~~a 248 (249)
++++.+
T Consensus 228 ~~~~~~ 233 (247)
T PRK08945 228 LMGDDS 233 (247)
T ss_pred HhCccc
Confidence 998765
|
|
| >PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-34 Score=235.41 Aligned_cols=228 Identities=34% Similarity=0.428 Sum_probs=200.0
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhC
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 88 (249)
.+.+|++||||++++||++++++|+++|++|++++|+..+.+...+++...+.++.++.+|++|+++++.+++++.+.++
T Consensus 2 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (246)
T PRK05653 2 SLQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFG 81 (246)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 45678999999999999999999999999999999999888888888877778899999999999999999999988889
Q ss_pred CccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchh
Q 025672 89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH 168 (249)
Q Consensus 89 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~ 168 (249)
++|+|||++|.....+..+.+.+++...++.|+.+++++++++.+.+.+... ++||++||..+..+..+...
T Consensus 82 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~--------~~ii~~ss~~~~~~~~~~~~ 153 (246)
T PRK05653 82 ALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARY--------GRIVNISSVSGVTGNPGQTN 153 (246)
T ss_pred CCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC--------cEEEEECcHHhccCCCCCcH
Confidence 9999999999877677777889999999999999999999999999976543 78999999988888888889
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhccCC
Q 025672 169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247 (249)
Q Consensus 169 y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~ 247 (249)
|+.+|++++.+++++++++. +.|++++.|+||.+.++.... ..+...+......+.+++.+++|+++++.|++++.
T Consensus 154 y~~sk~~~~~~~~~l~~~~~-~~~i~~~~i~pg~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~ 229 (246)
T PRK05653 154 YSAAKAGVIGFTKALALELA-SRGITVNAVAPGFIDTDMTEG--LPEEVKAEILKEIPLGRLGQPEEVANAVAFLASDA 229 (246)
T ss_pred hHhHHHHHHHHHHHHHHHHh-hcCeEEEEEEeCCcCCcchhh--hhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCch
Confidence 99999999999999999997 789999999999998765321 12333444555667788899999999999999864
|
|
| >PRK06181 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-35 Score=240.18 Aligned_cols=225 Identities=27% Similarity=0.349 Sum_probs=191.5
Q ss_pred CcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCcc
Q 025672 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD 91 (249)
Q Consensus 12 ~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 91 (249)
++++|||||++|||+++++.|+++|++|++++|+..+.+.+.+++...+.++.++.+|++|+++++.+++++.+.++++|
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 80 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGID 80 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 47899999999999999999999999999999998888888887776677899999999999999999999999999999
Q ss_pred EEEEcCCCCCCCCCCCC-CHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhhH
Q 025672 92 ILVNAAAGNFLVPAEDL-SPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVS 170 (249)
Q Consensus 92 ~vi~~ag~~~~~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~ 170 (249)
+||||+|.....++.+. +.+++.+.+++|+.+++.+++.+.+.|.+.. ++||++||..+..+.++...|+
T Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~---------~~iv~~sS~~~~~~~~~~~~Y~ 151 (263)
T PRK06181 81 ILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASR---------GQIVVVSSLAGLTGVPTRSGYA 151 (263)
T ss_pred EEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC---------CEEEEEecccccCCCCCccHHH
Confidence 99999998777777777 8899999999999999999999999987542 7899999999888888899999
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhccCC
Q 025672 171 AAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247 (249)
Q Consensus 171 ~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~ 247 (249)
++|++++++++.++.++. +.||++++|.||++.|++........... .........++.+|+|+++++.++++..
T Consensus 152 ~sK~~~~~~~~~l~~~~~-~~~i~~~~i~pg~v~t~~~~~~~~~~~~~-~~~~~~~~~~~~~~~dva~~i~~~~~~~ 226 (263)
T PRK06181 152 ASKHALHGFFDSLRIELA-DDGVAVTVVCPGFVATDIRKRALDGDGKP-LGKSPMQESKIMSAEECAEAILPAIARR 226 (263)
T ss_pred HHHHHHHHHHHHHHHHhh-hcCceEEEEecCccccCcchhhccccccc-cccccccccCCCCHHHHHHHHHHHhhCC
Confidence 999999999999999998 88999999999999976543322111100 0001111236889999999999999754
|
|
| >PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-35 Score=258.28 Aligned_cols=224 Identities=24% Similarity=0.315 Sum_probs=187.9
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCc--chHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHH
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK--TVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~--~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 86 (249)
.+++|++||||+++|||++++++|+++|++|++++++. +.++++.+++ ...++.+|++|+++++++++.+.+.
T Consensus 207 ~~~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~-----~~~~~~~Dv~~~~~~~~~~~~~~~~ 281 (450)
T PRK08261 207 PLAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRV-----GGTALALDITAPDAPARIAEHLAER 281 (450)
T ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHc-----CCeEEEEeCCCHHHHHHHHHHHHHh
Confidence 46799999999999999999999999999999998853 2233333332 2357899999999999999999999
Q ss_pred hCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccc
Q 025672 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ 166 (249)
Q Consensus 87 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~ 166 (249)
++++|+||||+|+.....+.+.+.++|+..+++|+.+++++++++.+.+..+. +++||++||..+..+.+++
T Consensus 282 ~g~id~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~--------~g~iv~~SS~~~~~g~~~~ 353 (450)
T PRK08261 282 HGGLDIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGD--------GGRIVGVSSISGIAGNRGQ 353 (450)
T ss_pred CCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcC--------CCEEEEECChhhcCCCCCC
Confidence 99999999999988777888899999999999999999999999999655433 3889999999999888899
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhccC
Q 025672 167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246 (249)
Q Consensus 167 ~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~ 246 (249)
..|+++|+++++|+++++.|+. ++||++|+|+||+++|++... ... ...+......++.+.++|+|+++++.||+++
T Consensus 354 ~~Y~asKaal~~~~~~la~el~-~~gi~v~~v~PG~i~t~~~~~-~~~-~~~~~~~~~~~l~~~~~p~dva~~~~~l~s~ 430 (450)
T PRK08261 354 TNYAASKAGVIGLVQALAPLLA-ERGITINAVAPGFIETQMTAA-IPF-ATREAGRRMNSLQQGGLPVDVAETIAWLASP 430 (450)
T ss_pred hHHHHHHHHHHHHHHHHHHHHh-hhCcEEEEEEeCcCcchhhhc-cch-hHHHHHhhcCCcCCCCCHHHHHHHHHHHhCh
Confidence 9999999999999999999998 889999999999999765432 211 1122222334677888999999999999998
Q ss_pred CC
Q 025672 247 AG 248 (249)
Q Consensus 247 ~a 248 (249)
.+
T Consensus 431 ~~ 432 (450)
T PRK08261 431 AS 432 (450)
T ss_pred hh
Confidence 65
|
|
| >COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-35 Score=224.08 Aligned_cols=186 Identities=24% Similarity=0.253 Sum_probs=170.2
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
|+++|.++|||||++|||+++|++|.+.|.+|++++|+++++++.+++. ..+....||+.|.++.+++++++.+.|
T Consensus 1 mk~tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~----p~~~t~v~Dv~d~~~~~~lvewLkk~~ 76 (245)
T COG3967 1 MKTTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAEN----PEIHTEVCDVADRDSRRELVEWLKKEY 76 (245)
T ss_pred CcccCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcC----cchheeeecccchhhHHHHHHHHHhhC
Confidence 4678999999999999999999999999999999999999998877665 467889999999999999999999999
Q ss_pred CCccEEEEcCCCCCCCCCC--CCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCcc
Q 025672 88 GKLDILVNAAAGNFLVPAE--DLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY 165 (249)
Q Consensus 88 ~~id~vi~~ag~~~~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~ 165 (249)
+.++++|||||+...-.+. +...++.+..+++|+.+|+.|++.|+|.+.++.. +.||++||..++.|...
T Consensus 77 P~lNvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~--------a~IInVSSGLafvPm~~ 148 (245)
T COG3967 77 PNLNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPE--------ATIINVSSGLAFVPMAS 148 (245)
T ss_pred CchheeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCC--------ceEEEeccccccCcccc
Confidence 9999999999987654443 3445778899999999999999999999998864 88999999999999999
Q ss_pred chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccc
Q 025672 166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDT 206 (249)
Q Consensus 166 ~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~ 206 (249)
.+.||++|+|++.++.+|+..+. ..+|+|.-+.|..|+|+
T Consensus 149 ~PvYcaTKAaiHsyt~aLR~Qlk-~t~veVIE~~PP~V~t~ 188 (245)
T COG3967 149 TPVYCATKAAIHSYTLALREQLK-DTSVEVIELAPPLVDTT 188 (245)
T ss_pred cccchhhHHHHHHHHHHHHHHhh-hcceEEEEecCCceecC
Confidence 99999999999999999999997 78999999999999986
|
|
| >PRK07577 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-35 Score=234.79 Aligned_cols=215 Identities=24% Similarity=0.325 Sum_probs=182.3
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCc
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 90 (249)
++|+++||||+++||++++++|+++|++|++++|+.+.. ....++++|++|+++++++++++.+.+ ++
T Consensus 2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~~-----------~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~ 69 (234)
T PRK07577 2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDD-----------FPGELFACDLADIEQTAATLAQINEIH-PV 69 (234)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCcccc-----------cCceEEEeeCCCHHHHHHHHHHHHHhC-CC
Confidence 579999999999999999999999999999999987530 112578999999999999999988876 58
Q ss_pred cEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhhH
Q 025672 91 DILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVS 170 (249)
Q Consensus 91 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~ 170 (249)
|++|||+|.....++.+.+.+++.+.+++|+.+++.+.++++|.|.+.+. ++||++||.. ..+.+....|+
T Consensus 70 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--------~~iv~~sS~~-~~~~~~~~~Y~ 140 (234)
T PRK07577 70 DAIVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQ--------GRIVNICSRA-IFGALDRTSYS 140 (234)
T ss_pred cEEEECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCC--------cEEEEEcccc-ccCCCCchHHH
Confidence 99999999877777778899999999999999999999999999987643 7899999985 44667788999
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCC-hHHHHHhhhhhhcccCCCCHHHHHHHHHHhccCC
Q 025672 171 AAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA-PEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247 (249)
Q Consensus 171 ~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~ 247 (249)
++|+++++++++++.|++ ++||++++|+||+++|+....... .+..........+.++..+|+|+++++.+|+++.
T Consensus 141 ~sK~a~~~~~~~~a~e~~-~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~ 217 (234)
T PRK07577 141 AAKSALVGCTRTWALELA-EYGITVNAVAPGPIETELFRQTRPVGSEEEKRVLASIPMRRLGTPEEVAAAIAFLLSDD 217 (234)
T ss_pred HHHHHHHHHHHHHHHHHH-hhCcEEEEEecCcccCcccccccccchhHHHHHhhcCCCCCCcCHHHHHHHHHHHhCcc
Confidence 999999999999999998 889999999999999876433211 1222233444567788889999999999999875
|
|
| >PRK06924 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-35 Score=237.88 Aligned_cols=224 Identities=17% Similarity=0.171 Sum_probs=183.3
Q ss_pred cEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCc-chHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCC--
Q 025672 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK-TVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK-- 89 (249)
Q Consensus 13 k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~-- 89 (249)
|+++||||++|||++++++|+++|++|++++|+. +.++.+.+ ..+.+++++++|++|+++++.+++++.+.++.
T Consensus 2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~---~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~ 78 (251)
T PRK06924 2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLAE---QYNSNLTFHSLDLQDVHELETNFNEILSSIQEDN 78 (251)
T ss_pred cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHHHh---ccCCceEEEEecCCCHHHHHHHHHHHHHhcCccc
Confidence 6899999999999999999999999999999986 33333322 23557889999999999999999998877653
Q ss_pred cc--EEEEcCCCCC-CCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccc
Q 025672 90 LD--ILVNAAAGNF-LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ 166 (249)
Q Consensus 90 id--~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~ 166 (249)
++ ++|+|+|... ..++.+.+.++|.+.+++|+.+++.+++.+++.|.+.+. .++||++||..+..+.++.
T Consensus 79 ~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~-------~~~iv~~sS~~~~~~~~~~ 151 (251)
T PRK06924 79 VSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKV-------DKRVINISSGAAKNPYFGW 151 (251)
T ss_pred CCceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCC-------CceEEEecchhhcCCCCCc
Confidence 22 7899999764 367778899999999999999999999999999976431 3789999999998898999
Q ss_pred hhhHHHHHHHHHHHHHHHHHhc-CCCCeEEEEEecCccccccccCC----CChHHHHHhhhhhhcccCCCCHHHHHHHHH
Q 025672 167 IHVSAAKAAVDSITRSLALEWG-TDYAIRVNGIAPGPIKDTAGVSK----LAPEEIRSKATDYMAAYKFGEKWDIAMAAL 241 (249)
Q Consensus 167 ~~y~~sK~a~~~l~~~la~e~~-~~~gi~v~~v~pG~v~t~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~dva~~v~ 241 (249)
..|+++|+++++|++.++.|++ .+.||+|++|.||+++|++.... .......+.+....+.+++.+|+|+|+.++
T Consensus 152 ~~Y~~sKaa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~ 231 (251)
T PRK06924 152 SAYCSSKAGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNMQAQIRSSSKEDFTNLDRFITLKEEGKLLSPEYVAKALR 231 (251)
T ss_pred HHHhHHHHHHHHHHHHHHHHhhhcCCCeEEEEecCCccccHhHHHHHhcCcccchHHHHHHHHhhcCCcCCHHHHHHHHH
Confidence 9999999999999999999975 25689999999999998653221 111111233445567788999999999999
Q ss_pred HhccC
Q 025672 242 YLASD 246 (249)
Q Consensus 242 ~l~s~ 246 (249)
+|+++
T Consensus 232 ~l~~~ 236 (251)
T PRK06924 232 NLLET 236 (251)
T ss_pred HHHhc
Confidence 99987
|
|
| >PRK08251 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-34 Score=234.02 Aligned_cols=213 Identities=21% Similarity=0.227 Sum_probs=183.1
Q ss_pred CcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhc--CCCeeEEEccCCCHHHHHHHHHHHHHHhCC
Q 025672 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVESTINHFGK 89 (249)
Q Consensus 12 ~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 89 (249)
+|+++||||++|||++++++|+++|++|++++|+.++++++.+++... +.++.++++|++|+++++++++++.+.+++
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 81 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGG 81 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 689999999999999999999999999999999998888887777543 457899999999999999999999999999
Q ss_pred ccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCcc-chh
Q 025672 90 LDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY-QIH 168 (249)
Q Consensus 90 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~-~~~ 168 (249)
+|++|||+|+....++.+.+.+.+++.+++|+.+++.+++.+++.+.+.+. ++||++||..+..+.+. ...
T Consensus 82 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~--------~~iv~~sS~~~~~~~~~~~~~ 153 (248)
T PRK08251 82 LDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGS--------GHLVLISSVSAVRGLPGVKAA 153 (248)
T ss_pred CCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC--------CeEEEEeccccccCCCCCccc
Confidence 999999999887777777888999999999999999999999999987553 78999999988877764 688
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhccC
Q 025672 169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246 (249)
Q Consensus 169 y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~ 246 (249)
|+.||++++++++.++.++. ..||++++|+||+++|++...... .....+++|.++.++..++.
T Consensus 154 Y~~sK~a~~~~~~~l~~~~~-~~~i~v~~v~pg~v~t~~~~~~~~-------------~~~~~~~~~~a~~i~~~~~~ 217 (248)
T PRK08251 154 YAASKAGVASLGEGLRAELA-KTPIKVSTIEPGYIRSEMNAKAKS-------------TPFMVDTETGVKALVKAIEK 217 (248)
T ss_pred HHHHHHHHHHHHHHHHHHhc-ccCcEEEEEecCcCcchhhhcccc-------------CCccCCHHHHHHHHHHHHhc
Confidence 99999999999999999997 789999999999999764332110 11245677777777665543
|
|
| >PRK08324 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-34 Score=263.66 Aligned_cols=233 Identities=30% Similarity=0.371 Sum_probs=202.2
Q ss_pred CCCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHH
Q 025672 6 KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN 85 (249)
Q Consensus 6 ~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 85 (249)
....+++|++|||||+||||++++++|+++|++|++++|+.+.++...+++... .++.++.+|++|+++++++++++.+
T Consensus 416 ~~~~l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~-~~v~~v~~Dvtd~~~v~~~~~~~~~ 494 (681)
T PRK08324 416 KPKPLAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGP-DRALGVACDVTDEAAVQAAFEEAAL 494 (681)
T ss_pred CCcCCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhcc-CcEEEEEecCCCHHHHHHHHHHHHH
Confidence 344578999999999999999999999999999999999998888887777544 5788999999999999999999999
Q ss_pred HhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCcc
Q 025672 86 HFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY 165 (249)
Q Consensus 86 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~ 165 (249)
.+|++|+||||+|.....++.+.+.++|+..+++|+.+++.+++.+.+.|.+++. +|+||++||..+..+.++
T Consensus 495 ~~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~-------~g~iV~vsS~~~~~~~~~ 567 (681)
T PRK08324 495 AFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGL-------GGSIVFIASKNAVNPGPN 567 (681)
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC-------CcEEEEECCccccCCCCC
Confidence 9999999999999888888888999999999999999999999999999987542 378999999999988889
Q ss_pred chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcc--ccccccCC----------CChHHHHHhhhhhhcccCCCCH
Q 025672 166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPI--KDTAGVSK----------LAPEEIRSKATDYMAAYKFGEK 233 (249)
Q Consensus 166 ~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v--~t~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~ 233 (249)
...|+++|+++++++++++.|++ +.||++|.|+||++ .|...... ..++++.+.+....+++++.++
T Consensus 568 ~~~Y~asKaa~~~l~~~la~e~~-~~gIrvn~v~Pg~v~~~t~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~v~~ 646 (681)
T PRK08324 568 FGAYGAAKAAELHLVRQLALELG-PDGIRVNGVNPDAVVRGSGIWTGEWIEARAAAYGLSEEELEEFYRARNLLKREVTP 646 (681)
T ss_pred cHHHHHHHHHHHHHHHHHHHHhc-ccCeEEEEEeCceeecCCccccchhhhhhhhhccCChHHHHHHHHhcCCcCCccCH
Confidence 99999999999999999999998 88999999999999 65433221 1223333345556677889999
Q ss_pred HHHHHHHHHhccCC
Q 025672 234 WDIAMAALYLASDA 247 (249)
Q Consensus 234 ~dva~~v~~l~s~~ 247 (249)
+|++++++||+++.
T Consensus 647 ~DvA~a~~~l~s~~ 660 (681)
T PRK08324 647 EDVAEAVVFLASGL 660 (681)
T ss_pred HHHHHHHHHHhCcc
Confidence 99999999999753
|
|
| >PRK09135 pteridine reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-34 Score=231.28 Aligned_cols=225 Identities=30% Similarity=0.373 Sum_probs=190.4
Q ss_pred CCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCc-chHHHHHHHHHhc-CCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK-TVLRSAVAALHSL-GIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 10 l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~-~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
++++++|||||+++||++++++|+++|++|++++|+. +..+.+.+.+... +..+.++.+|++|+++++.+++++.+.+
T Consensus 4 ~~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 83 (249)
T PRK09135 4 DSAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAF 83 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 4679999999999999999999999999999999864 4456666666543 3468899999999999999999999999
Q ss_pred CCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch
Q 025672 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 167 (249)
Q Consensus 88 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~ 167 (249)
+++|+||||+|.....++.+.+.++++..+++|+.+++.+++++.+++.+. .+.+++++|..+..+.++..
T Consensus 84 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~ 154 (249)
T PRK09135 84 GRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQ---------RGAIVNITDIHAERPLKGYP 154 (249)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhC---------CeEEEEEeChhhcCCCCCch
Confidence 999999999998776777777889999999999999999999999998664 27788888887777888889
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhccC
Q 025672 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246 (249)
Q Consensus 168 ~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~ 246 (249)
.|+.+|++++.+++.++.++. + +|++++|.||++.|+...... +...........+..+.++++|+++++.+++.+
T Consensus 155 ~Y~~sK~~~~~~~~~l~~~~~-~-~i~~~~v~pg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~ 230 (249)
T PRK09135 155 VYCAAKAALEMLTRSLALELA-P-EVRVNAVAPGAILWPEDGNSF-DEEARQAILARTPLKRIGTPEDIAEAVRFLLAD 230 (249)
T ss_pred hHHHHHHHHHHHHHHHHHHHC-C-CCeEEEEEeccccCccccccC-CHHHHHHHHhcCCcCCCcCHHHHHHHHHHHcCc
Confidence 999999999999999999985 4 799999999999987653333 233344445556777888999999999999865
|
|
| >PRK06197 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-34 Score=241.47 Aligned_cols=227 Identities=19% Similarity=0.206 Sum_probs=179.0
Q ss_pred CCCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhc--CCCeeEEEccCCCHHHHHHHHHHH
Q 025672 6 KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVEST 83 (249)
Q Consensus 6 ~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~ 83 (249)
..+++++|+++||||++|||++++++|+++|++|++++|+.++.++..+++... +.++.++++|++|.++++++++++
T Consensus 10 ~~~~~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~ 89 (306)
T PRK06197 10 DIPDQSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADAL 89 (306)
T ss_pred ccccCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHH
Confidence 346789999999999999999999999999999999999988877777776532 456889999999999999999999
Q ss_pred HHHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc--
Q 025672 84 INHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT-- 161 (249)
Q Consensus 84 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~-- 161 (249)
.+.++++|+||||||..... ...+.++++..+++|+.+++.+++.+++.|.+.. .++||++||..+..
T Consensus 90 ~~~~~~iD~li~nAg~~~~~--~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~--------~~~iV~vSS~~~~~~~ 159 (306)
T PRK06197 90 RAAYPRIDLLINNAGVMYTP--KQTTADGFELQFGTNHLGHFALTGLLLDRLLPVP--------GSRVVTVSSGGHRIRA 159 (306)
T ss_pred HhhCCCCCEEEECCccccCC--CccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCC--------CCEEEEECCHHHhccC
Confidence 99999999999999975432 3456778999999999999999999999998754 37899999976432
Q ss_pred -----------cCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEE--ecCccccccccCCCChHHHHHhhhhhhccc
Q 025672 162 -----------ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGI--APGPIKDTAGVSKLAPEEIRSKATDYMAAY 228 (249)
Q Consensus 162 -----------~~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v--~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~ 228 (249)
+.++...|+.||+++..|++.++++++ +.|++++++ +||+|+|++... ... .....+....+.
T Consensus 160 ~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~l~-~~~i~v~~v~~~PG~v~T~~~~~-~~~-~~~~~~~~~~~~- 235 (306)
T PRK06197 160 AIHFDDLQWERRYNRVAAYGQSKLANLLFTYELQRRLA-AAGATTIAVAAHPGVSNTELARN-LPR-ALRPVATVLAPL- 235 (306)
T ss_pred CCCccccCcccCCCcHHHHHHHHHHHHHHHHHHHHHhh-cCCCCeEEEEeCCCcccCccccc-CcH-HHHHHHHHHHhh-
Confidence 234567899999999999999999997 778777665 699999875432 221 122222222221
Q ss_pred CCCCHHHHHHHHHHhccC
Q 025672 229 KFGEKWDIAMAALYLASD 246 (249)
Q Consensus 229 ~~~~~~dva~~v~~l~s~ 246 (249)
...++++-+..+++++.+
T Consensus 236 ~~~~~~~g~~~~~~~~~~ 253 (306)
T PRK06197 236 LAQSPEMGALPTLRAATD 253 (306)
T ss_pred hcCCHHHHHHHHHHHhcC
Confidence 134667777777776644
|
|
| >KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-34 Score=240.45 Aligned_cols=227 Identities=22% Similarity=0.223 Sum_probs=190.4
Q ss_pred CCCCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHh--cCCCeeEEEccCCCHHHHHHHHHH
Q 025672 5 FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHS--LGIPAIGLEGDVRKREDAVRVVES 82 (249)
Q Consensus 5 ~~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~~~~~~~~ 82 (249)
....++.+++++|||+++|||+++|+.|+.+|++|++.+|+.++.++.++++.. ....+.+++||+++.+++.++.++
T Consensus 28 ~~~~~~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~ 107 (314)
T KOG1208|consen 28 THGIDLSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEE 107 (314)
T ss_pred eccccCCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHH
Confidence 456678899999999999999999999999999999999999999999999975 345788999999999999999999
Q ss_pred HHHHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc
Q 025672 83 TINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 162 (249)
Q Consensus 83 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~ 162 (249)
+.+.++++|++|||||+..... ..+.|.++.+|.+|++|+++|++.++|.+++... +|||++||..+...
T Consensus 108 ~~~~~~~ldvLInNAGV~~~~~--~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~--------~RIV~vsS~~~~~~ 177 (314)
T KOG1208|consen 108 FKKKEGPLDVLINNAGVMAPPF--SLTKDGLELTFATNYLGHFLLTELLLPLLKRSAP--------SRIVNVSSILGGGK 177 (314)
T ss_pred HHhcCCCccEEEeCcccccCCc--ccCccchhheehhhhHHHHHHHHHHHHHHhhCCC--------CCEEEEcCccccCc
Confidence 9999999999999999876543 5677899999999999999999999999998653 88999999775110
Q ss_pred -------------CccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccC
Q 025672 163 -------------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK 229 (249)
Q Consensus 163 -------------~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~ 229 (249)
+.....|+.||.++..+++.|++.+. + ||.+++++||.+.|+.... .......+........
T Consensus 178 ~~~~~l~~~~~~~~~~~~~Y~~SKla~~l~~~eL~k~l~-~-~V~~~~~hPG~v~t~~l~r---~~~~~~~l~~~l~~~~ 252 (314)
T KOG1208|consen 178 IDLKDLSGEKAKLYSSDAAYALSKLANVLLANELAKRLK-K-GVTTYSVHPGVVKTTGLSR---VNLLLRLLAKKLSWPL 252 (314)
T ss_pred cchhhccchhccCccchhHHHHhHHHHHHHHHHHHHHhh-c-CceEEEECCCcccccceec---chHHHHHHHHHHHHHh
Confidence 22334599999999999999999996 5 9999999999999874544 2233333444444444
Q ss_pred CCCHHHHHHHHHHhccC
Q 025672 230 FGEKWDIAMAALYLASD 246 (249)
Q Consensus 230 ~~~~~dva~~v~~l~s~ 246 (249)
+.++++-|++++|++-+
T Consensus 253 ~ks~~~ga~t~~~~a~~ 269 (314)
T KOG1208|consen 253 TKSPEQGAATTCYAALS 269 (314)
T ss_pred ccCHHHHhhheehhccC
Confidence 57899999999988754
|
|
| >PRK07041 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-34 Score=232.67 Aligned_cols=212 Identities=25% Similarity=0.351 Sum_probs=179.1
Q ss_pred EEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCccEEEE
Q 025672 16 LLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVN 95 (249)
Q Consensus 16 lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~ 95 (249)
+||||++|||++++++|+++|++|++++|+.++++...++++. +.++.++.+|++|++++++++++ ++++|++||
T Consensus 1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~----~~~id~li~ 75 (230)
T PRK07041 1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGG-GAPVRTAALDITDEAAVDAFFAE----AGPFDHVVI 75 (230)
T ss_pred CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc-CCceEEEEccCCCHHHHHHHHHh----cCCCCEEEE
Confidence 6999999999999999999999999999998877777766642 56788999999999999998875 378999999
Q ss_pred cCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhhHHHHHH
Q 025672 96 AAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAA 175 (249)
Q Consensus 96 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~~sK~a 175 (249)
|+|.....++.+.+.+++++++++|+.+++++++ .+.+.+ .++||++||..+..+.++...|+++|++
T Consensus 76 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~--~~~~~~----------~g~iv~~ss~~~~~~~~~~~~Y~~sK~a 143 (230)
T PRK07041 76 TAADTPGGPVRALPLAAAQAAMDSKFWGAYRVAR--AARIAP----------GGSLTFVSGFAAVRPSASGVLQGAINAA 143 (230)
T ss_pred CCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHh--hhhhcC----------CeEEEEECchhhcCCCCcchHHHHHHHH
Confidence 9998777777888899999999999999999999 344432 3889999999999888899999999999
Q ss_pred HHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCC--hHHHHHhhhhhhcccCCCCHHHHHHHHHHhccCC
Q 025672 176 VDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA--PEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247 (249)
Q Consensus 176 ~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~ 247 (249)
+++++++++.|+. + |++++++||+++|++...... ............|.++..+|+|++++++||+++.
T Consensus 144 ~~~~~~~la~e~~-~--irv~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~ 214 (230)
T PRK07041 144 LEALARGLALELA-P--VRVNTVSPGLVDTPLWSKLAGDAREAMFAAAAERLPARRVGQPEDVANAILFLAANG 214 (230)
T ss_pred HHHHHHHHHHHhh-C--ceEEEEeecccccHHHHhhhccchHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhcCC
Confidence 9999999999997 4 999999999999875432111 1223334455667788899999999999999753
|
|
| >PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-33 Score=229.68 Aligned_cols=227 Identities=31% Similarity=0.428 Sum_probs=193.1
Q ss_pred CCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCc-chHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhC
Q 025672 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK-TVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (249)
Q Consensus 10 l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 88 (249)
++.|++|||||+|+||++++++|+++|++|+++.|+. ...+.+.+.+...+.++.++++|++|.++++++++++.+.++
T Consensus 4 ~~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~ 83 (249)
T PRK12825 4 LMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVERFG 83 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHHcC
Confidence 4578999999999999999999999999987766554 445556666666667899999999999999999999988889
Q ss_pred CccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchh
Q 025672 89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH 168 (249)
Q Consensus 89 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~ 168 (249)
++|++||++|.....++.+.+.++++..+++|+.+++++++.+.+.+.+.+. +++|++||..+..+.++...
T Consensus 84 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--------~~~i~~SS~~~~~~~~~~~~ 155 (249)
T PRK12825 84 RIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRG--------GRIVNISSVAGLPGWPGRSN 155 (249)
T ss_pred CCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC--------CEEEEECccccCCCCCCchH
Confidence 9999999999877777778889999999999999999999999999977643 78999999998888888899
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhccCC
Q 025672 169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247 (249)
Q Consensus 169 y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~ 247 (249)
|+.+|+++.++++.+++++. +.||+++.|+||++.|+........ ..... ....+.+++.+++|+++.+.+++++.
T Consensus 156 y~~sK~~~~~~~~~~~~~~~-~~~i~~~~i~pg~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~dva~~~~~~~~~~ 231 (249)
T PRK12825 156 YAAAKAGLVGLTKALARELA-EYGITVNMVAPGDIDTDMKEATIEE-AREAK-DAETPLGRSGTPEDIARAVAFLCSDA 231 (249)
T ss_pred HHHHHHHHHHHHHHHHHHHh-hcCeEEEEEEECCccCCccccccch-hHHhh-hccCCCCCCcCHHHHHHHHHHHhCcc
Confidence 99999999999999999997 7899999999999998765443222 11111 22457778999999999999999765
|
|
| >PRK07453 protochlorophyllide oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-34 Score=240.22 Aligned_cols=231 Identities=16% Similarity=0.138 Sum_probs=179.7
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
+.+++|+++||||++|||.+++++|+++|++|++++|+.++++.+.+++...+.++.++++|++|.++++++++++.+.+
T Consensus 2 ~~~~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 81 (322)
T PRK07453 2 SQDAKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALG 81 (322)
T ss_pred CCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhC
Confidence 34578999999999999999999999999999999999988888888875445678999999999999999999988777
Q ss_pred CCccEEEEcCCCCCC-CCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc-----
Q 025672 88 GKLDILVNAAAGNFL-VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT----- 161 (249)
Q Consensus 88 ~~id~vi~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~----- 161 (249)
+++|+||||||+... .+..+.+.++++..+++|+.|+++++++++|.|.+.+.. .++||++||.....
T Consensus 82 ~~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~------~~riV~vsS~~~~~~~~~~ 155 (322)
T PRK07453 82 KPLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAP------DPRLVILGTVTANPKELGG 155 (322)
T ss_pred CCccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCC------CceEEEEcccccCccccCC
Confidence 899999999997543 233466889999999999999999999999999875421 26899999965321
Q ss_pred ------------------------------cCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccc-cccccC
Q 025672 162 ------------------------------ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK-DTAGVS 210 (249)
Q Consensus 162 ------------------------------~~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~-t~~~~~ 210 (249)
+..+...|+.||.+...+++.+++++....||++++|+||+|. |+.. .
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~-~ 234 (322)
T PRK07453 156 KIPIPAPADLGDLSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCVADTPLF-R 234 (322)
T ss_pred ccCCCCccchhhhhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCCccc-c
Confidence 1123467999999999999999999852469999999999995 5433 2
Q ss_pred CCCh--HHHHHhhhhhhcccCCCCHHHHHHHHHHhccC
Q 025672 211 KLAP--EEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246 (249)
Q Consensus 211 ~~~~--~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~ 246 (249)
.... ..+...+.. .......++++-++.+++++.+
T Consensus 235 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 271 (322)
T PRK07453 235 NTPPLFQKLFPWFQK-NITGGYVSQELAGERVAQVVAD 271 (322)
T ss_pred cCCHHHHHHHHHHHH-HHhhceecHHHHhhHHHHhhcC
Confidence 2221 111111111 1122346778888888887754
|
|
| >PRK12829 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-33 Score=232.37 Aligned_cols=230 Identities=29% Similarity=0.416 Sum_probs=193.5
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
.++++|++|||||+++||++++++|+++|++|++++|+.+..+.+.++.... ++.++.+|++|+++++.+++++.+.+
T Consensus 7 ~~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~ 84 (264)
T PRK12829 7 KPLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGA--KVTATVADVADPAQVERVFDTAVERF 84 (264)
T ss_pred hccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcC--ceEEEEccCCCHHHHHHHHHHHHHHh
Confidence 3478999999999999999999999999999999999988777766665432 67899999999999999999999999
Q ss_pred CCccEEEEcCCCC-CCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccc
Q 025672 88 GKLDILVNAAAGN-FLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ 166 (249)
Q Consensus 88 ~~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~ 166 (249)
+++|+|||++|.. ...+....+.+++...+++|+.+++.+++.+++.+...+. +++|+++||..+..+.+..
T Consensus 85 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~-------~~~vv~~ss~~~~~~~~~~ 157 (264)
T PRK12829 85 GGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGH-------GGVIIALSSVAGRLGYPGR 157 (264)
T ss_pred CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCC-------CeEEEEecccccccCCCCC
Confidence 9999999999987 4556677888999999999999999999999998876432 2668899998888888888
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCC---------hHHHHHhhhhhhcccCCCCHHHHH
Q 025672 167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA---------PEEIRSKATDYMAAYKFGEKWDIA 237 (249)
Q Consensus 167 ~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~dva 237 (249)
..|+.+|++++.+++.++.++. ..++++++|.||+++|++...... ............+..++.+++|++
T Consensus 158 ~~y~~~K~a~~~~~~~l~~~~~-~~~i~~~~l~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a 236 (264)
T PRK12829 158 TPYAASKWAVVGLVKSLAIELG-PLGIRVNAILPGIVRGPRMRRVIEARAQQLGIGLDEMEQEYLEKISLGRMVEPEDIA 236 (264)
T ss_pred chhHHHHHHHHHHHHHHHHHHh-hcCeEEEEEecCCcCChHHHHHhhhhhhccCCChhHHHHHHHhcCCCCCCCCHHHHH
Confidence 8999999999999999999997 789999999999998775432211 112223334445677899999999
Q ss_pred HHHHHhccCC
Q 025672 238 MAALYLASDA 247 (249)
Q Consensus 238 ~~v~~l~s~~ 247 (249)
+++.+++++.
T Consensus 237 ~~~~~l~~~~ 246 (264)
T PRK12829 237 ATALFLASPA 246 (264)
T ss_pred HHHHHHcCcc
Confidence 9999999753
|
|
| >TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-33 Score=230.54 Aligned_cols=227 Identities=32% Similarity=0.440 Sum_probs=193.2
Q ss_pred CcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCcc
Q 025672 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD 91 (249)
Q Consensus 12 ~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 91 (249)
+|++||||++++||++++++|+++|++|++++|+.+..+.+.+++...+.++.++.+|++|+++++++++++.+.++++|
T Consensus 1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 80 (255)
T TIGR01963 1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGLD 80 (255)
T ss_pred CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence 47899999999999999999999999999999998888888887766667899999999999999999999999889999
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhhHH
Q 025672 92 ILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSA 171 (249)
Q Consensus 92 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~~ 171 (249)
+|||++|.....+..+.++++++++++.|+.+++.+++++++.|.+.+. +++|++||..+..+.+....|+.
T Consensus 81 ~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~--------~~~v~~ss~~~~~~~~~~~~y~~ 152 (255)
T TIGR01963 81 ILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGW--------GRIINIASAHGLVASPFKSAYVA 152 (255)
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC--------eEEEEEcchhhcCCCCCCchhHH
Confidence 9999999876666667788999999999999999999999999977653 78999999988888888899999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCC---------ChHHH-HHhhhhhhcccCCCCHHHHHHHHH
Q 025672 172 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL---------APEEI-RSKATDYMAAYKFGEKWDIAMAAL 241 (249)
Q Consensus 172 sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~---------~~~~~-~~~~~~~~~~~~~~~~~dva~~v~ 241 (249)
+|++++++++.++.++. +.||+++.++||+++|+...... ..... .+.+....+.+.+.+++|++++++
T Consensus 153 sk~a~~~~~~~~~~~~~-~~~i~v~~i~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~ 231 (255)
T TIGR01963 153 AKHGLIGLTKVLALEVA-AHGITVNAICPGYVRTPLVEKQIADQAKTRGIPEEQVIREVMLPGQPTKRFVTVDEVAETAL 231 (255)
T ss_pred HHHHHHHHHHHHHHHhh-hcCeEEEEEecCccccHHHHHHHHhhhcccCCCchHHHHHHHHccCccccCcCHHHHHHHHH
Confidence 99999999999999987 78999999999999876432111 01111 112223335566899999999999
Q ss_pred HhccCC
Q 025672 242 YLASDA 247 (249)
Q Consensus 242 ~l~s~~ 247 (249)
+++++.
T Consensus 232 ~~~~~~ 237 (255)
T TIGR01963 232 FLASDA 237 (255)
T ss_pred HHcCcc
Confidence 999763
|
This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. |
| >PRK07806 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-34 Score=234.58 Aligned_cols=219 Identities=22% Similarity=0.246 Sum_probs=177.0
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcc-hHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT-VLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~-~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
++++|+++||||+||||++++++|+++|++|++++|+.+ ..+.+.+++...+.++.++.+|++|+++++.+++++.+.+
T Consensus 3 ~~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 82 (248)
T PRK07806 3 DLPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEF 82 (248)
T ss_pred CCCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhC
Confidence 367899999999999999999999999999999999754 4566667776656678899999999999999999999888
Q ss_pred CCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccc-----cc
Q 025672 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY-----TA 162 (249)
Q Consensus 88 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~-----~~ 162 (249)
+.+|++|||+|..... + .++...+++|+.+++++++++.+.|.+. ++||++||..+. .+
T Consensus 83 ~~~d~vi~~ag~~~~~---~---~~~~~~~~vn~~~~~~l~~~~~~~~~~~----------~~iv~isS~~~~~~~~~~~ 146 (248)
T PRK07806 83 GGLDALVLNASGGMES---G---MDEDYAMRLNRDAQRNLARAALPLMPAG----------SRVVFVTSHQAHFIPTVKT 146 (248)
T ss_pred CCCcEEEECCCCCCCC---C---CCcceeeEeeeHHHHHHHHHHHhhccCC----------ceEEEEeCchhhcCccccC
Confidence 9999999999864321 1 1245678999999999999999988542 679999996443 23
Q ss_pred CccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccC---CCChHHHHHhhhhhhcccCCCCHHHHHHH
Q 025672 163 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVS---KLAPEEIRSKATDYMAAYKFGEKWDIAMA 239 (249)
Q Consensus 163 ~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~dva~~ 239 (249)
.+.+..|+.+|++++.+++.++.|++ +.||+|++|.||++.|+.... ...+... . ....|.+++.+|+|++++
T Consensus 147 ~~~~~~Y~~sK~a~e~~~~~l~~~~~-~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~dva~~ 222 (248)
T PRK07806 147 MPEYEPVARSKRAGEDALRALRPELA-EKGIGFVVVSGDMIEGTVTATLLNRLNPGAI-E--ARREAAGKLYTVSEFAAE 222 (248)
T ss_pred CccccHHHHHHHHHHHHHHHHHHHhh-ccCeEEEEeCCccccCchhhhhhccCCHHHH-H--HHHhhhcccCCHHHHHHH
Confidence 34467899999999999999999998 889999999999998654321 1122211 1 234577899999999999
Q ss_pred HHHhccCC
Q 025672 240 ALYLASDA 247 (249)
Q Consensus 240 v~~l~s~~ 247 (249)
+.||++..
T Consensus 223 ~~~l~~~~ 230 (248)
T PRK07806 223 VARAVTAP 230 (248)
T ss_pred HHHHhhcc
Confidence 99999743
|
|
| >PRK05693 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-33 Score=233.88 Aligned_cols=217 Identities=20% Similarity=0.251 Sum_probs=179.2
Q ss_pred cEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCccE
Q 025672 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI 92 (249)
Q Consensus 13 k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ 92 (249)
|++|||||++|||++++++|+++|++|++++|+.+.++.+. . ..+.++.+|++++++++++++++.+.++++|+
T Consensus 2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~----~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ 75 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALA----A--AGFTAVQLDVNDGAALARLAEELEAEHGGLDV 75 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----H--CCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCE
Confidence 68999999999999999999999999999999877655432 2 24678999999999999999999999999999
Q ss_pred EEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhhHHH
Q 025672 93 LVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAA 172 (249)
Q Consensus 93 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~~s 172 (249)
+|||+|.....++.+.+.++++..+++|+.+++.++++++|.|.+. .|+||++||..+..+.+....|+++
T Consensus 76 vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~---------~g~iv~isS~~~~~~~~~~~~Y~~s 146 (274)
T PRK05693 76 LINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRS---------RGLVVNIGSVSGVLVTPFAGAYCAS 146 (274)
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc---------CCEEEEECCccccCCCCCccHHHHH
Confidence 9999998777778888999999999999999999999999999754 2789999999998888889999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChH---------H--HHHhhhhh--hcccCCCCHHHHHHH
Q 025672 173 KAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPE---------E--IRSKATDY--MAAYKFGEKWDIAMA 239 (249)
Q Consensus 173 K~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~---------~--~~~~~~~~--~~~~~~~~~~dva~~ 239 (249)
|++++.++++++.|++ ++||+|++|+||+++|+......... . ..+.+... .......+|+++++.
T Consensus 147 K~al~~~~~~l~~e~~-~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 225 (274)
T PRK05693 147 KAAVHALSDALRLELA-PFGVQVMEVQPGAIASQFASNASREAEQLLAEQSPWWPLREHIQARARASQDNPTPAAEFARQ 225 (274)
T ss_pred HHHHHHHHHHHHHHhh-hhCeEEEEEecCccccccccccccchhhcCCCCCccHHHHHHHHHHHHhccCCCCCHHHHHHH
Confidence 9999999999999998 88999999999999987543211100 0 00111110 111235689999999
Q ss_pred HHHhcc
Q 025672 240 ALYLAS 245 (249)
Q Consensus 240 v~~l~s 245 (249)
++-.+.
T Consensus 226 i~~~~~ 231 (274)
T PRK05693 226 LLAAVQ 231 (274)
T ss_pred HHHHHh
Confidence 987664
|
|
| >PRK12828 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-33 Score=229.12 Aligned_cols=219 Identities=27% Similarity=0.303 Sum_probs=188.7
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
+.+++|++||||++++||++++++|+++|++|++++|+.++..+..+++... .+.++.+|++|.++++++++++.+.+
T Consensus 3 ~~~~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~ 80 (239)
T PRK12828 3 HSLQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPAD--ALRIGGIDLVDPQAARRAVDEVNRQF 80 (239)
T ss_pred CCCCCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhc--CceEEEeecCCHHHHHHHHHHHHHHh
Confidence 3478999999999999999999999999999999999987776666665433 46778899999999999999999999
Q ss_pred CCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch
Q 025672 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 167 (249)
Q Consensus 88 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~ 167 (249)
+++|+|||++|.....++.+.+.+++++.+++|+.+++.+++++.+.+.++.. ++||++||..+..+.++..
T Consensus 81 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~--------~~iv~~sS~~~~~~~~~~~ 152 (239)
T PRK12828 81 GRLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGG--------GRIVNIGAGAALKAGPGMG 152 (239)
T ss_pred CCcCEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCC--------CEEEEECchHhccCCCCcc
Confidence 99999999999876666777789999999999999999999999999976543 7899999999888888889
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhccCC
Q 025672 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247 (249)
Q Consensus 168 ~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~ 247 (249)
.|+++|++++.+++.++.++. +.||+++.|.||++.|+........ .++.++.+++|+++++.|++++.
T Consensus 153 ~y~~sk~a~~~~~~~~a~~~~-~~~i~~~~i~pg~v~~~~~~~~~~~----------~~~~~~~~~~dva~~~~~~l~~~ 221 (239)
T PRK12828 153 AYAAAKAGVARLTEALAAELL-DRGITVNAVLPSIIDTPPNRADMPD----------ADFSRWVTPEQIAAVIAFLLSDE 221 (239)
T ss_pred hhHHHHHHHHHHHHHHHHHhh-hcCeEEEEEecCcccCcchhhcCCc----------hhhhcCCCHHHHHHHHHHHhCcc
Confidence 999999999999999999987 7899999999999997643222211 12344778999999999999865
|
|
| >PRK07023 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-34 Score=232.31 Aligned_cols=220 Identities=21% Similarity=0.235 Sum_probs=181.0
Q ss_pred cEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHH-HHHHh---C
Q 025672 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVES-TINHF---G 88 (249)
Q Consensus 13 k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-~~~~~---~ 88 (249)
+++|||||+||||++++++|+++|++|++++|+.+.. . ....+.++.++++|++|++++++++++ +.+.+ +
T Consensus 2 ~~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~--~---~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~ 76 (243)
T PRK07023 2 VRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPS--L---AAAAGERLAEVELDLSDAAAAAAWLAGDLLAAFVDGA 76 (243)
T ss_pred ceEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchh--h---hhccCCeEEEEEeccCCHHHHHHHHHHHHHHHhccCC
Confidence 3799999999999999999999999999999986531 1 122355788999999999999998876 55544 4
Q ss_pred CccEEEEcCCCCCC-CCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch
Q 025672 89 KLDILVNAAAGNFL-VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 167 (249)
Q Consensus 89 ~id~vi~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~ 167 (249)
++|++|||+|.... .++.+.+.+++++.+++|+.+++.+++.+.+.|.++.. ++||++||..+..+.++..
T Consensus 77 ~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--------~~iv~isS~~~~~~~~~~~ 148 (243)
T PRK07023 77 SRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAE--------RRILHISSGAARNAYAGWS 148 (243)
T ss_pred CceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCC--------CEEEEEeChhhcCCCCCch
Confidence 79999999998653 56777889999999999999999999999999986543 8899999999998988999
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCC--CChH--HHHHhhhhhhcccCCCCHHHHHH-HHHH
Q 025672 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK--LAPE--EIRSKATDYMAAYKFGEKWDIAM-AALY 242 (249)
Q Consensus 168 ~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~--~~~~--~~~~~~~~~~~~~~~~~~~dva~-~v~~ 242 (249)
.|+++|++++++++.++.+ . +.||+++.|+||+++|++.... ...+ .....+....+.++..+|+|+|+ .+.|
T Consensus 149 ~Y~~sK~a~~~~~~~~~~~-~-~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~~ 226 (243)
T PRK07023 149 VYCATKAALDHHARAVALD-A-NRALRIVSLAPGVVDTGMQATIRATDEERFPMRERFRELKASGALSTPEDAARRLIAY 226 (243)
T ss_pred HHHHHHHHHHHHHHHHHhc-C-CCCcEEEEecCCccccHHHHHHHhcccccchHHHHHHHhhhcCCCCCHHHHHHHHHHH
Confidence 9999999999999999999 6 7899999999999998753211 0000 11223455567788999999999 6778
Q ss_pred hccCC
Q 025672 243 LASDA 247 (249)
Q Consensus 243 l~s~~ 247 (249)
|++++
T Consensus 227 l~~~~ 231 (243)
T PRK07023 227 LLSDD 231 (243)
T ss_pred Hhccc
Confidence 88765
|
|
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-34 Score=262.53 Aligned_cols=219 Identities=20% Similarity=0.203 Sum_probs=188.0
Q ss_pred CCCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHH
Q 025672 6 KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN 85 (249)
Q Consensus 6 ~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 85 (249)
...++++|+++||||++|||++++++|+++|++|++++|+.+.++++.+++...+.++.++++|++|+++++++++++.+
T Consensus 365 ~~~~~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~ 444 (657)
T PRK07201 365 LRGPLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILA 444 (657)
T ss_pred cccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence 34568899999999999999999999999999999999999989888888877777899999999999999999999999
Q ss_pred HhCCccEEEEcCCCCCCCCCCCC--CHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC
Q 025672 86 HFGKLDILVNAAAGNFLVPAEDL--SPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT 163 (249)
Q Consensus 86 ~~~~id~vi~~ag~~~~~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~ 163 (249)
.++++|++|||||......+.+. +.++++..+++|+.+++.+++.++|.|.+++. |+||++||..+..+.
T Consensus 445 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~--------g~iv~isS~~~~~~~ 516 (657)
T PRK07201 445 EHGHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRF--------GHVVNVSSIGVQTNA 516 (657)
T ss_pred hcCCCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCC--------CEEEEECChhhcCCC
Confidence 99999999999997654443322 25789999999999999999999999987653 889999999998888
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHh
Q 025672 164 WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYL 243 (249)
Q Consensus 164 ~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l 243 (249)
++.+.|+++|+++++|+++++.|+. ++||+|++|+||+|+|++...... .......+||++|+.++..
T Consensus 517 ~~~~~Y~~sK~a~~~~~~~la~e~~-~~~i~v~~v~pg~v~T~~~~~~~~-----------~~~~~~~~~~~~a~~i~~~ 584 (657)
T PRK07201 517 PRFSAYVASKAALDAFSDVAASETL-SDGITFTTIHMPLVRTPMIAPTKR-----------YNNVPTISPEEAADMVVRA 584 (657)
T ss_pred CCcchHHHHHHHHHHHHHHHHHHHH-hhCCcEEEEECCcCcccccCcccc-----------ccCCCCCCHHHHHHHHHHH
Confidence 8899999999999999999999998 889999999999999876432110 0112346788888887765
Q ss_pred c
Q 025672 244 A 244 (249)
Q Consensus 244 ~ 244 (249)
+
T Consensus 585 ~ 585 (657)
T PRK07201 585 I 585 (657)
T ss_pred H
Confidence 5
|
|
| >COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-33 Score=229.79 Aligned_cols=225 Identities=33% Similarity=0.453 Sum_probs=185.2
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcch--HHHHHHHHHhcC-CCeeEEEccCCC-HHHHHHHHHHHH
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTV--LRSAVAALHSLG-IPAIGLEGDVRK-REDAVRVVESTI 84 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~--~~~~~~~~~~~~-~~~~~~~~Dl~~-~~~~~~~~~~~~ 84 (249)
++++|+++|||+++|||+++|+.|+++|++|+++.++.+. .+.+.+.....+ ..+.+..+|+++ .++++.+++.+.
T Consensus 2 ~~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~ 81 (251)
T COG1028 2 DLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAAAE 81 (251)
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHHHH
Confidence 5789999999999999999999999999999988887664 344444333222 367888999998 999999999999
Q ss_pred HHhCCccEEEEcCCCCCC-CCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC
Q 025672 85 NHFGKLDILVNAAAGNFL-VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT 163 (249)
Q Consensus 85 ~~~~~id~vi~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~ 163 (249)
+.+|++|++|||||.... .++.+.+.++|+..+++|+.+++.+++++.|.+.++ +||++||..+. +.
T Consensus 82 ~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~-----------~Iv~isS~~~~-~~ 149 (251)
T COG1028 82 EEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQ-----------RIVNISSVAGL-GG 149 (251)
T ss_pred HHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhhC-----------eEEEECCchhc-CC
Confidence 999999999999999877 488889999999999999999999999888888732 59999999998 77
Q ss_pred cc-chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHH-HHhhhhhhcccCCCCHHHHHHHHH
Q 025672 164 WY-QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEI-RSKATDYMAAYKFGEKWDIAMAAL 241 (249)
Q Consensus 164 ~~-~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~dva~~v~ 241 (249)
++ ...|++||+|+.+|++.++.|+. ++||++++|+||++.|++.......... ........+..|...|++++..+.
T Consensus 150 ~~~~~~Y~~sK~al~~~~~~l~~e~~-~~gi~v~~v~PG~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (251)
T COG1028 150 PPGQAAYAASKAALIGLTKALALELA-PRGIRVNAVAPGYIDTPMTAALESAELEALKRLAARIPLGRLGTPEEVAAAVA 228 (251)
T ss_pred CCCcchHHHHHHHHHHHHHHHHHHHh-hhCcEEEEEEeccCCCcchhhhhhhhhhHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence 77 49999999999999999999998 8899999999999987765433222100 111111115558889999999999
Q ss_pred HhccC
Q 025672 242 YLASD 246 (249)
Q Consensus 242 ~l~s~ 246 (249)
|+.+.
T Consensus 229 ~~~~~ 233 (251)
T COG1028 229 FLASD 233 (251)
T ss_pred HHcCc
Confidence 98765
|
|
| >PRK06482 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-33 Score=231.86 Aligned_cols=222 Identities=23% Similarity=0.296 Sum_probs=184.9
Q ss_pred CcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCcc
Q 025672 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD 91 (249)
Q Consensus 12 ~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 91 (249)
.|++|||||+||||++++++|+++|++|++++|+.+.++.+.++. +.++.++++|++|.++++++++++.+.++++|
T Consensus 2 ~k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 78 (276)
T PRK06482 2 SKTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARY---GDRLWVLQLDVTDSAAVRAVVDRAFAALGRID 78 (276)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc---cCceEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 478999999999999999999999999999999987766655443 34788999999999999999999998899999
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhhHH
Q 025672 92 ILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSA 171 (249)
Q Consensus 92 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~~ 171 (249)
+||||+|.....+..+.+.+++++.+++|+.++++++++++|+|.++.. ++||++||..+..+.++...|++
T Consensus 79 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~--------~~iv~~sS~~~~~~~~~~~~Y~~ 150 (276)
T PRK06482 79 VVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGG--------GRIVQVSSEGGQIAYPGFSLYHA 150 (276)
T ss_pred EEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC--------CEEEEEcCcccccCCCCCchhHH
Confidence 9999999887777778888999999999999999999999999976543 78999999988888888999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCC-------hH----HHHHhhhhhhcccCCCCHHHHHHHH
Q 025672 172 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA-------PE----EIRSKATDYMAAYKFGEKWDIAMAA 240 (249)
Q Consensus 172 sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~-------~~----~~~~~~~~~~~~~~~~~~~dva~~v 240 (249)
||++++.|+++++.++. ++||+++.|.||++.|+....... .. .+.+.+.. -+..-..+++|+++++
T Consensus 151 sK~a~~~~~~~l~~~~~-~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~~~~~~a~ 228 (276)
T PRK06482 151 TKWGIEGFVEAVAQEVA-PFGIEFTIVEPGPARTNFGAGLDRGAPLDAYDDTPVGDLRRALAD-GSFAIPGDPQKMVQAM 228 (276)
T ss_pred HHHHHHHHHHHHHHHhh-ccCcEEEEEeCCccccCCcccccccCCCccccchhhHHHHHHHhh-ccCCCCCCHHHHHHHH
Confidence 99999999999999998 889999999999998765322110 11 11111111 1222247899999999
Q ss_pred HHhccC
Q 025672 241 LYLASD 246 (249)
Q Consensus 241 ~~l~s~ 246 (249)
+..+..
T Consensus 229 ~~~~~~ 234 (276)
T PRK06482 229 IASADQ 234 (276)
T ss_pred HHHHcC
Confidence 988753
|
|
| >PRK07326 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-33 Score=226.95 Aligned_cols=218 Identities=33% Similarity=0.457 Sum_probs=188.1
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhC
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 88 (249)
.+.+++++||||+|+||++++++|+++|++|++++|+.++++++.+++... .++.++++|++|.++++.+++++.+.++
T Consensus 3 ~~~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (237)
T PRK07326 3 SLKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNK-GNVLGLAADVRDEADVQRAVDAIVAAFG 81 (237)
T ss_pred CCCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhcc-CcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 356899999999999999999999999999999999988888887777643 5788999999999999999999999999
Q ss_pred CccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchh
Q 025672 89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH 168 (249)
Q Consensus 89 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~ 168 (249)
++|+|||++|.....++.+.+.+++++.+++|+.+++.+++++++.+.+. .++||++||..+..+..+...
T Consensus 82 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~---------~~~iv~~ss~~~~~~~~~~~~ 152 (237)
T PRK07326 82 GLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRG---------GGYIINISSLAGTNFFAGGAA 152 (237)
T ss_pred CCCEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHC---------CeEEEEECChhhccCCCCCch
Confidence 99999999998777777888999999999999999999999999998432 378999999988888888889
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhccCCC
Q 025672 169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAG 248 (249)
Q Consensus 169 y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~a 248 (249)
|+.+|+++.++++.++.|+. +.|++++.|.||++.|+...... .+. .....+++|+++.++++++...
T Consensus 153 y~~sk~a~~~~~~~~~~~~~-~~gi~v~~v~pg~~~t~~~~~~~-~~~----------~~~~~~~~d~a~~~~~~l~~~~ 220 (237)
T PRK07326 153 YNASKFGLVGFSEAAMLDLR-QYGIKVSTIMPGSVATHFNGHTP-SEK----------DAWKIQPEDIAQLVLDLLKMPP 220 (237)
T ss_pred HHHHHHHHHHHHHHHHHHhc-ccCcEEEEEeeccccCccccccc-chh----------hhccCCHHHHHHHHHHHHhCCc
Confidence 99999999999999999997 88999999999999876432221 110 0113689999999999987653
|
|
| >PRK07102 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-33 Score=228.62 Aligned_cols=211 Identities=16% Similarity=0.112 Sum_probs=182.9
Q ss_pred cEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhc-CCCeeEEEccCCCHHHHHHHHHHHHHHhCCcc
Q 025672 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL-GIPAIGLEGDVRKREDAVRVVESTINHFGKLD 91 (249)
Q Consensus 13 k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 91 (249)
|+++||||++|||++++++|+++|++|++++|+.++.+...+++... +.++.++++|++|+++++++++++.+ .+|
T Consensus 2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~---~~d 78 (243)
T PRK07102 2 KKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPA---LPD 78 (243)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhh---cCC
Confidence 68999999999999999999999999999999998887777776543 45789999999999999999988754 469
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhhHH
Q 025672 92 ILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSA 171 (249)
Q Consensus 92 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~~ 171 (249)
++|||+|.....++.+.+.+++.+.+++|+.+++++++++.|.|.+++. ++||++||..+..+.++...|++
T Consensus 79 ~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--------~~iv~~sS~~~~~~~~~~~~Y~~ 150 (243)
T PRK07102 79 IVLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGS--------GTIVGISSVAGDRGRASNYVYGS 150 (243)
T ss_pred EEEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCC--------CEEEEEecccccCCCCCCcccHH
Confidence 9999999876667778889999999999999999999999999987653 88999999988888888899999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhccCC
Q 025672 172 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247 (249)
Q Consensus 172 sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~ 247 (249)
+|+++.+++++++.|+. +.||++++|+||+++|+...... .+...+.+|+|+++.+..+++..
T Consensus 151 sK~a~~~~~~~l~~el~-~~gi~v~~v~pg~v~t~~~~~~~------------~~~~~~~~~~~~a~~i~~~~~~~ 213 (243)
T PRK07102 151 AKAALTAFLSGLRNRLF-KSGVHVLTVKPGFVRTPMTAGLK------------LPGPLTAQPEEVAKDIFRAIEKG 213 (243)
T ss_pred HHHHHHHHHHHHHHHhh-ccCcEEEEEecCcccChhhhccC------------CCccccCCHHHHHHHHHHHHhCC
Confidence 99999999999999998 88999999999999976432110 12334678999999999888754
|
|
| >KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-34 Score=229.52 Aligned_cols=191 Identities=27% Similarity=0.294 Sum_probs=175.3
Q ss_pred CCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHH
Q 025672 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (249)
Q Consensus 7 ~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 86 (249)
...+++|.|+|||+.+|.|+.+|++|.++|++|.....+++..+.+..+.. .++...+++|++++++++++.+.+++.
T Consensus 24 ~~~~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~--s~rl~t~~LDVT~~esi~~a~~~V~~~ 101 (322)
T KOG1610|consen 24 LDSLSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETK--SPRLRTLQLDVTKPESVKEAAQWVKKH 101 (322)
T ss_pred ccccCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhc--CCcceeEeeccCCHHHHHHHHHHHHHh
Confidence 345789999999999999999999999999999999988888888888775 568889999999999999999999887
Q ss_pred hC--CccEEEEcCCCC-CCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC
Q 025672 87 FG--KLDILVNAAAGN-FLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT 163 (249)
Q Consensus 87 ~~--~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~ 163 (249)
.+ .+-.||||||+. ..++.+..+.+++++.+++|++|++.++++|+|.+++.. ||||++||..|..+.
T Consensus 102 l~~~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~ar---------GRvVnvsS~~GR~~~ 172 (322)
T KOG1610|consen 102 LGEDGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRAR---------GRVVNVSSVLGRVAL 172 (322)
T ss_pred cccccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhcc---------CeEEEecccccCccC
Confidence 64 688999999976 467888889999999999999999999999999998874 999999999999999
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccccccc
Q 025672 164 WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGV 209 (249)
Q Consensus 164 ~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~ 209 (249)
|...+|++||+|++.|+.++++|+. ++||.|..|.||.+.|+...
T Consensus 173 p~~g~Y~~SK~aVeaf~D~lR~EL~-~fGV~VsiiePG~f~T~l~~ 217 (322)
T KOG1610|consen 173 PALGPYCVSKFAVEAFSDSLRRELR-PFGVKVSIIEPGFFKTNLAN 217 (322)
T ss_pred cccccchhhHHHHHHHHHHHHHHHH-hcCcEEEEeccCccccccCC
Confidence 9999999999999999999999998 99999999999999876554
|
|
| >PRK07578 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-33 Score=222.54 Aligned_cols=188 Identities=19% Similarity=0.285 Sum_probs=163.5
Q ss_pred EEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCccEE
Q 025672 14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDIL 93 (249)
Q Consensus 14 ~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~v 93 (249)
+++|||+++|||++++++|+++ ++|++++|+.. .++||++|++++++++++ ++++|++
T Consensus 2 ~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~-----------------~~~~D~~~~~~~~~~~~~----~~~id~l 59 (199)
T PRK07578 2 KILVIGASGTIGRAVVAELSKR-HEVITAGRSSG-----------------DVQVDITDPASIRALFEK----VGKVDAV 59 (199)
T ss_pred eEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC-----------------ceEecCCChHHHHHHHHh----cCCCCEE
Confidence 6999999999999999999999 99999998753 368999999999998875 4789999
Q ss_pred EEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhhHHHH
Q 025672 94 VNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAK 173 (249)
Q Consensus 94 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~~sK 173 (249)
|||+|.....++.+.+.++|.+.+++|+.+++++++++.|+|.+. |+|+++||..+..+.++...|+++|
T Consensus 60 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~----------g~iv~iss~~~~~~~~~~~~Y~~sK 129 (199)
T PRK07578 60 VSAAGKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDG----------GSFTLTSGILSDEPIPGGASAATVN 129 (199)
T ss_pred EECCCCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcC----------CeEEEEcccccCCCCCCchHHHHHH
Confidence 999998777778888999999999999999999999999999653 7799999999988888999999999
Q ss_pred HHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhccC
Q 025672 174 AAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246 (249)
Q Consensus 174 ~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~ 246 (249)
+++++|+++++.|+ ++||+||+|+||+++|++.. .....+..+..+|+|+|+.+.++++.
T Consensus 130 ~a~~~~~~~la~e~--~~gi~v~~i~Pg~v~t~~~~-----------~~~~~~~~~~~~~~~~a~~~~~~~~~ 189 (199)
T PRK07578 130 GALEGFVKAAALEL--PRGIRINVVSPTVLTESLEK-----------YGPFFPGFEPVPAARVALAYVRSVEG 189 (199)
T ss_pred HHHHHHHHHHHHHc--cCCeEEEEEcCCcccCchhh-----------hhhcCCCCCCCCHHHHHHHHHHHhcc
Confidence 99999999999998 56999999999999875321 11112334567999999999998864
|
|
| >PRK09009 C factor cell-cell signaling protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-33 Score=227.74 Aligned_cols=205 Identities=19% Similarity=0.164 Sum_probs=166.5
Q ss_pred cEEEEecCCCchhHHHHHHHHHcC--CeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCc
Q 025672 13 KVALLTGGGSGIGFEISLQLGKHG--AAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (249)
Q Consensus 13 k~~lItGa~~giG~~~a~~l~~~G--~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 90 (249)
++++||||++|||++++++|+++| ..|++..|+.... ..+.++.++++|+++.++++++. +.++++
T Consensus 1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~--------~~~~~~~~~~~Dls~~~~~~~~~----~~~~~i 68 (235)
T PRK09009 1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD--------FQHDNVQWHALDVTDEAEIKQLS----EQFTQL 68 (235)
T ss_pred CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc--------cccCceEEEEecCCCHHHHHHHH----HhcCCC
Confidence 479999999999999999999986 4666666654321 12357889999999999988854 456899
Q ss_pred cEEEEcCCCCCC------CCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc---
Q 025672 91 DILVNAAAGNFL------VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT--- 161 (249)
Q Consensus 91 d~vi~~ag~~~~------~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~--- 161 (249)
|++|||+|.... .++.+.+.+.|+..+++|+.+++.+++.++|.|.+... ++|+++||..+..
T Consensus 69 d~li~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~--------~~i~~iss~~~~~~~~ 140 (235)
T PRK09009 69 DWLINCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSES--------AKFAVISAKVGSISDN 140 (235)
T ss_pred CEEEECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCC--------ceEEEEeecccccccC
Confidence 999999998642 35677888999999999999999999999999976543 7899998865532
Q ss_pred cCccchhhHHHHHHHHHHHHHHHHHhcCC--CCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHH
Q 025672 162 ATWYQIHVSAAKAAVDSITRSLALEWGTD--YAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMA 239 (249)
Q Consensus 162 ~~~~~~~y~~sK~a~~~l~~~la~e~~~~--~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~ 239 (249)
+.+++..|+++|+++.+|+++|+.|+. + .||+|++|+||+++|++... +....|.+++.+|||+++.
T Consensus 141 ~~~~~~~Y~asK~a~~~~~~~la~e~~-~~~~~i~v~~v~PG~v~t~~~~~----------~~~~~~~~~~~~~~~~a~~ 209 (235)
T PRK09009 141 RLGGWYSYRASKAALNMFLKTLSIEWQ-RSLKHGVVLALHPGTTDTALSKP----------FQQNVPKGKLFTPEYVAQC 209 (235)
T ss_pred CCCCcchhhhhHHHHHHHHHHHHHHhh-cccCCeEEEEEcccceecCCCcc----------hhhccccCCCCCHHHHHHH
Confidence 245677899999999999999999997 4 69999999999999876432 1223466778899999999
Q ss_pred HHHhccCCC
Q 025672 240 ALYLASDAG 248 (249)
Q Consensus 240 v~~l~s~~a 248 (249)
++||+++.+
T Consensus 210 ~~~l~~~~~ 218 (235)
T PRK09009 210 LLGIIANAT 218 (235)
T ss_pred HHHHHHcCC
Confidence 999998764
|
|
| >TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-33 Score=223.44 Aligned_cols=222 Identities=34% Similarity=0.443 Sum_probs=191.4
Q ss_pred EEEecCCCchhHHHHHHHHHcCCeEEEEeCCc-chHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCccEE
Q 025672 15 ALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK-TVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDIL 93 (249)
Q Consensus 15 ~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~v 93 (249)
+||||++++||..++++|+++|++|++++|+. +..+...+.+...+.++.++.+|++|+++++++++.+.+.++++|+|
T Consensus 1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 80 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPIDIL 80 (239)
T ss_pred CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 58999999999999999999999999999875 45566667776667788999999999999999999999999999999
Q ss_pred EEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhhHHHH
Q 025672 94 VNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAK 173 (249)
Q Consensus 94 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~~sK 173 (249)
||++|.....++.+.+.+++++.+++|+.+++.+++.+.+.+.+... ++++++||..+..+.++...|+++|
T Consensus 81 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--------~~~v~~sS~~~~~g~~~~~~y~~~k 152 (239)
T TIGR01830 81 VNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRS--------GRIINISSVVGLMGNAGQANYAASK 152 (239)
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC--------eEEEEECCccccCCCCCCchhHHHH
Confidence 99999876666677788999999999999999999999999876543 7899999998888888899999999
Q ss_pred HHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhccCC
Q 025672 174 AAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247 (249)
Q Consensus 174 ~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~ 247 (249)
+++..+++.++.++. ..|++++.+.||+++|+... .. +......+....+..++.+++|+++.+.+++++.
T Consensus 153 ~a~~~~~~~l~~~~~-~~g~~~~~i~pg~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~ 223 (239)
T TIGR01830 153 AGVIGFTKSLAKELA-SRNITVNAVAPGFIDTDMTD-KL-SEKVKKKILSQIPLGRFGTPEEVANAVAFLASDE 223 (239)
T ss_pred HHHHHHHHHHHHHHh-hcCeEEEEEEECCCCChhhh-hc-ChHHHHHHHhcCCcCCCcCHHHHHHHHHHHhCcc
Confidence 999999999999997 78999999999999865332 22 2334444556677788999999999999999664
|
This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis. |
| >KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-34 Score=217.00 Aligned_cols=185 Identities=25% Similarity=0.354 Sum_probs=169.3
Q ss_pred CCcEEEEecCC-CchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHH-HhC
Q 025672 11 KGKVALLTGGG-SGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN-HFG 88 (249)
Q Consensus 11 ~~k~~lItGa~-~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~-~~~ 88 (249)
+.|.+||||++ ||||.+++++|.+.|+.|+.++|+.+...++..+. ++...++|+++++++..+..++++ .+|
T Consensus 6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~-----gl~~~kLDV~~~~~V~~v~~evr~~~~G 80 (289)
T KOG1209|consen 6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQF-----GLKPYKLDVSKPEEVVTVSGEVRANPDG 80 (289)
T ss_pred CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhh-----CCeeEEeccCChHHHHHHHHHHhhCCCC
Confidence 56889999987 79999999999999999999999988877766544 488999999999999999999998 679
Q ss_pred CccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchh
Q 025672 89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH 168 (249)
Q Consensus 89 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~ 168 (249)
.+|+++||||.....|..+.+.++++++|++|+.|.+++++++...+.+.+ |.||+++|..+..+.+..+.
T Consensus 81 kld~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaK---------GtIVnvgSl~~~vpfpf~~i 151 (289)
T KOG1209|consen 81 KLDLLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAK---------GTIVNVGSLAGVVPFPFGSI 151 (289)
T ss_pred ceEEEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHcc---------ceEEEecceeEEeccchhhh
Confidence 999999999998888999999999999999999999999999996665543 99999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccC
Q 025672 169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVS 210 (249)
Q Consensus 169 y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~ 210 (249)
|.+||+|++++++.|..|++ ++||+|..+.||.|.|....+
T Consensus 152 YsAsKAAihay~~tLrlEl~-PFgv~Vin~itGGv~T~Ia~k 192 (289)
T KOG1209|consen 152 YSASKAAIHAYARTLRLELK-PFGVRVINAITGGVATDIADK 192 (289)
T ss_pred hhHHHHHHHHhhhhcEEeee-ccccEEEEecccceecccccC
Confidence 99999999999999999998 999999999999999865544
|
|
| >KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-34 Score=212.42 Aligned_cols=228 Identities=26% Similarity=0.363 Sum_probs=199.6
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhC
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 88 (249)
+.++-+.+|||+.+|+|++.+++|+.+|+.|++.+...++.++.++++ |.++.|...|++++++++.+++..+.+||
T Consensus 6 s~kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakel---g~~~vf~padvtsekdv~aala~ak~kfg 82 (260)
T KOG1199|consen 6 STKGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKEL---GGKVVFTPADVTSEKDVRAALAKAKAKFG 82 (260)
T ss_pred hhcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHh---CCceEEeccccCcHHHHHHHHHHHHhhcc
Confidence 457889999999999999999999999999999999999888888887 67899999999999999999999999999
Q ss_pred CccEEEEcCCCCCC------CCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc
Q 025672 89 KLDILVNAAAGNFL------VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 162 (249)
Q Consensus 89 ~id~vi~~ag~~~~------~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~ 162 (249)
++|..|||||+... ..-...+.|++.+.+++|++|+|+.++...-.|-.+.+++. ...|.||+..|..++.+
T Consensus 83 rld~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~--gqrgviintasvaafdg 160 (260)
T KOG1199|consen 83 RLDALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQN--GQRGVIINTASVAAFDG 160 (260)
T ss_pred ceeeeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCC--CcceEEEeeceeeeecC
Confidence 99999999997531 12235678999999999999999999999999976655443 33699999999999999
Q ss_pred CccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcc-cCCCCHHHHHHHHH
Q 025672 163 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAA-YKFGEKWDIAMAAL 241 (249)
Q Consensus 163 ~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~v~ 241 (249)
.-++.+|++||+++.+++--++++++ ..|||+++|.||.++||...+ .|+.....+...+|+ .|.+.|.|-+..+-
T Consensus 161 q~gqaaysaskgaivgmtlpiardla-~~gir~~tiapglf~tpllss--lpekv~~fla~~ipfpsrlg~p~eyahlvq 237 (260)
T KOG1199|consen 161 QTGQAAYSASKGAIVGMTLPIARDLA-GDGIRFNTIAPGLFDTPLLSS--LPEKVKSFLAQLIPFPSRLGHPHEYAHLVQ 237 (260)
T ss_pred ccchhhhhcccCceEeeechhhhhcc-cCceEEEeecccccCChhhhh--hhHHHHHHHHHhCCCchhcCChHHHHHHHH
Confidence 99999999999999999999999999 889999999999999875433 356677778888886 58899999988776
Q ss_pred Hhc
Q 025672 242 YLA 244 (249)
Q Consensus 242 ~l~ 244 (249)
-..
T Consensus 238 aii 240 (260)
T KOG1199|consen 238 AII 240 (260)
T ss_pred HHH
Confidence 544
|
|
| >COG0623 FabI Enoyl-[acyl-carrier-protein] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-32 Score=211.73 Aligned_cols=230 Identities=24% Similarity=0.251 Sum_probs=200.4
Q ss_pred CCCCCcEEEEecCC--CchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHH
Q 025672 8 DILKGKVALLTGGG--SGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN 85 (249)
Q Consensus 8 ~~l~~k~~lItGa~--~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 85 (249)
..|+||++||+|-. +.|+..||+.|.++|+++.++..++ ++++-.+++.+.-....+++||+++.++++++|+++.+
T Consensus 2 g~L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e-~l~krv~~la~~~~s~~v~~cDV~~d~~i~~~f~~i~~ 80 (259)
T COG0623 2 GLLEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGE-RLEKRVEELAEELGSDLVLPCDVTNDESIDALFATIKK 80 (259)
T ss_pred CccCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccH-HHHHHHHHHHhhccCCeEEecCCCCHHHHHHHHHHHHH
Confidence 46899999999987 6999999999999999999999886 55554444433222367899999999999999999999
Q ss_pred HhCCccEEEEcCCCCC----CCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc
Q 025672 86 HFGKLDILVNAAAGNF----LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT 161 (249)
Q Consensus 86 ~~~~id~vi~~ag~~~----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~ 161 (249)
++|.+|++||+-++.+ .+++.+.+.+.+...+++...+...+.+++.|.|.. +|.|+.++=..+..
T Consensus 81 ~~g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~----------ggSiltLtYlgs~r 150 (259)
T COG0623 81 KWGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNN----------GGSILTLTYLGSER 150 (259)
T ss_pred hhCcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCC----------CCcEEEEEecccee
Confidence 9999999999999876 257788999999999999999999999999999976 37799888887777
Q ss_pred cCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHH
Q 025672 162 ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAAL 241 (249)
Q Consensus 162 ~~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~ 241 (249)
..|++-.-+.+|+++++-+|.||.+++ ++|||||+|+-|++.|-....--....+.+......|++|..++|||+.+.+
T Consensus 151 ~vPnYNvMGvAKAaLEasvRyLA~dlG-~~gIRVNaISAGPIrTLAasgI~~f~~~l~~~e~~aPl~r~vt~eeVG~tA~ 229 (259)
T COG0623 151 VVPNYNVMGVAKAALEASVRYLAADLG-KEGIRVNAISAGPIRTLAASGIGDFRKMLKENEANAPLRRNVTIEEVGNTAA 229 (259)
T ss_pred ecCCCchhHHHHHHHHHHHHHHHHHhC-ccCeEEeeecccchHHHHhhccccHHHHHHHHHhhCCccCCCCHHHhhhhHH
Confidence 778888889999999999999999999 8899999999999997544444445677888888899999999999999999
Q ss_pred HhccCCCC
Q 025672 242 YLASDAGQ 249 (249)
Q Consensus 242 ~l~s~~a~ 249 (249)
||+||-++
T Consensus 230 fLlSdLss 237 (259)
T COG0623 230 FLLSDLSS 237 (259)
T ss_pred HHhcchhc
Confidence 99999653
|
|
| >PRK06101 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-33 Score=224.17 Aligned_cols=203 Identities=18% Similarity=0.139 Sum_probs=167.8
Q ss_pred cEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCccE
Q 025672 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI 92 (249)
Q Consensus 13 k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ 92 (249)
++++||||++|||++++++|+++|++|++++|+.+.++++.++ +.++.+++||++|+++++++++++. ..+|.
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~---~~~d~ 74 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQ----SANIFTLAFDVTDHPGTKAALSQLP---FIPEL 74 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHh----cCCCeEEEeeCCCHHHHHHHHHhcc---cCCCE
Confidence 7899999999999999999999999999999998766555432 3468899999999999999988763 24799
Q ss_pred EEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhhHHH
Q 025672 93 LVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAA 172 (249)
Q Consensus 93 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~~s 172 (249)
+|+|+|.....+..+.+.++|++++++|+.+++++++++.|.|.+ +++||++||..+..+.++...|+++
T Consensus 75 ~i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~----------~~~iv~isS~~~~~~~~~~~~Y~as 144 (240)
T PRK06101 75 WIFNAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSC----------GHRVVIVGSIASELALPRAEAYGAS 144 (240)
T ss_pred EEEcCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhc----------CCeEEEEechhhccCCCCCchhhHH
Confidence 999999754444456788999999999999999999999999854 2679999999998888889999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhcc
Q 025672 173 KAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245 (249)
Q Consensus 173 K~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s 245 (249)
|+++++|++.++.|+. ++||++++|.||+++|++...... ......+|+|+++.++..+.
T Consensus 145 K~a~~~~~~~l~~e~~-~~gi~v~~v~pg~i~t~~~~~~~~------------~~~~~~~~~~~a~~i~~~i~ 204 (240)
T PRK06101 145 KAAVAYFARTLQLDLR-PKGIEVVTVFPGFVATPLTDKNTF------------AMPMIITVEQASQEIRAQLA 204 (240)
T ss_pred HHHHHHHHHHHHHHHH-hcCceEEEEeCCcCCCCCcCCCCC------------CCCcccCHHHHHHHHHHHHh
Confidence 9999999999999998 889999999999999875432110 01123577777777766554
|
|
| >KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-32 Score=210.49 Aligned_cols=200 Identities=24% Similarity=0.239 Sum_probs=161.9
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHc-CCeEEE-EeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHH--
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKH-GAAIAI-MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH-- 86 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~-G~~v~l-~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-- 86 (249)
..|.++||||.+|||..++++|... |-.+++ ..|+.+...+..++....+.+++++++|+++.++++.+++++.+-
T Consensus 2 spksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~iVg 81 (249)
T KOG1611|consen 2 SPKSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKAATELALKSKSDSRVHIIQLDVTCDESIDNFVQEVEKIVG 81 (249)
T ss_pred CCccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHHHHHhhccCCceEEEEEecccHHHHHHHHHHHHhhcc
Confidence 4577999999999999999999975 555555 455566543222222234679999999999999999999999886
Q ss_pred hCCccEEEEcCCCCC-CCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCC---CCCCCCceEEEecccccccc
Q 025672 87 FGKLDILVNAAAGNF-LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQ---ASSSSGGIIINISATLHYTA 162 (249)
Q Consensus 87 ~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~---~~~~~~g~iv~iss~~~~~~ 162 (249)
...+|++|||||+.. .....+.+.+.|.+.+++|..|++++.|+|+|++++..... .-+..++.|||+||..+-.+
T Consensus 82 ~~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~~s~~ 161 (249)
T KOG1611|consen 82 SDGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSAGSIG 161 (249)
T ss_pred cCCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeeccccccC
Confidence 358999999999875 35556677888999999999999999999999998755431 22444578999988766543
Q ss_pred ---CccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCC
Q 025672 163 ---TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK 211 (249)
Q Consensus 163 ---~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~ 211 (249)
..+..+|..||+|++.|+|+++.|+. +.+|.|..+|||||.|+|....
T Consensus 162 ~~~~~~~~AYrmSKaAlN~f~ksls~dL~-~~~ilv~sihPGwV~TDMgg~~ 212 (249)
T KOG1611|consen 162 GFRPGGLSAYRMSKAALNMFAKSLSVDLK-DDHILVVSIHPGWVQTDMGGKK 212 (249)
T ss_pred CCCCcchhhhHhhHHHHHHHHHHhhhhhc-CCcEEEEEecCCeEEcCCCCCC
Confidence 24578999999999999999999998 9999999999999999887643
|
|
| >PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-33 Score=211.78 Aligned_cols=163 Identities=31% Similarity=0.416 Sum_probs=153.0
Q ss_pred cEEEEecCCCchhHHHHHHHHHcCC-eEEEEeCC--cchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCC
Q 025672 13 KVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRR--KTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK 89 (249)
Q Consensus 13 k~~lItGa~~giG~~~a~~l~~~G~-~v~l~~r~--~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 89 (249)
|+++||||++|||++++++|+++|. +|++++|+ .+..+++.+++...+.++.++++|++++++++++++++.+.+++
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP 80 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 7999999999999999999999966 78899998 67788888888888889999999999999999999999999999
Q ss_pred ccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhh
Q 025672 90 LDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHV 169 (249)
Q Consensus 90 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y 169 (249)
+|++|||+|.....++.+.+.++|++.+++|+.+++.+.++++| .. +|+||++||..+..+.+....|
T Consensus 81 ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~--~~----------~g~iv~~sS~~~~~~~~~~~~Y 148 (167)
T PF00106_consen 81 LDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLP--QG----------GGKIVNISSIAGVRGSPGMSAY 148 (167)
T ss_dssp ESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHH--HT----------TEEEEEEEEGGGTSSSTTBHHH
T ss_pred ccccccccccccccccccccchhhhhccccccceeeeeeehhee--cc----------ccceEEecchhhccCCCCChhH
Confidence 99999999998888888999999999999999999999999999 22 3999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHh
Q 025672 170 SAAKAAVDSITRSLALEW 187 (249)
Q Consensus 170 ~~sK~a~~~l~~~la~e~ 187 (249)
+++|+|+.+|++++++|+
T Consensus 149 ~askaal~~~~~~la~e~ 166 (167)
T PF00106_consen 149 SASKAALRGLTQSLAAEL 166 (167)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhc
Confidence 999999999999999986
|
As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A .... |
| >PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-32 Score=217.88 Aligned_cols=218 Identities=25% Similarity=0.295 Sum_probs=180.2
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhC
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 88 (249)
.+++|+++||||+++||.++++.|+++|++|++++|++++.+.+.+++... .++.++++|++++++++++++++.+.++
T Consensus 2 ~~~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 80 (238)
T PRK05786 2 RLKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKY-GNIHYVVGDVSSTESARNVIEKAAKVLN 80 (238)
T ss_pred CcCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCeEEEECCCCCHHHHHHHHHHHHHHhC
Confidence 478999999999999999999999999999999999988887776666543 3688999999999999999999988889
Q ss_pred CccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccc-ccCccch
Q 025672 89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY-TATWYQI 167 (249)
Q Consensus 89 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~-~~~~~~~ 167 (249)
++|.+|+++|.....++. +.++++..+++|+.+++.+++.++|.+.+. +++|++||..+. .+.++..
T Consensus 81 ~id~ii~~ag~~~~~~~~--~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~----------~~iv~~ss~~~~~~~~~~~~ 148 (238)
T PRK05786 81 AIDGLVVTVGGYVEDTVE--EFSGLEEMLTNHIKIPLYAVNASLRFLKEG----------SSIVLVSSMSGIYKASPDQL 148 (238)
T ss_pred CCCEEEEcCCCcCCCchH--HHHHHHHHHHHhchHHHHHHHHHHHHHhcC----------CEEEEEecchhcccCCCCch
Confidence 999999999875443333 348899999999999999999999998542 779999998764 3556778
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcc-cCCCCHHHHHHHHHHhccC
Q 025672 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAA-YKFGEKWDIAMAALYLASD 246 (249)
Q Consensus 168 ~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~v~~l~s~ 246 (249)
.|+++|+++..+++.++.++. .+||+++.|+||+++|++... ... +.. .+. .+..+++|+++.+.|++++
T Consensus 149 ~Y~~sK~~~~~~~~~~~~~~~-~~gi~v~~i~pg~v~~~~~~~----~~~-~~~---~~~~~~~~~~~~va~~~~~~~~~ 219 (238)
T PRK05786 149 SYAVAKAGLAKAVEILASELL-GRGIRVNGIAPTTISGDFEPE----RNW-KKL---RKLGDDMAPPEDFAKVIIWLLTD 219 (238)
T ss_pred HHHHHHHHHHHHHHHHHHHHh-hcCeEEEEEecCccCCCCCch----hhh-hhh---ccccCCCCCHHHHHHHHHHHhcc
Confidence 899999999999999999997 889999999999999764211 111 111 111 2467899999999999987
Q ss_pred CC
Q 025672 247 AG 248 (249)
Q Consensus 247 ~a 248 (249)
.+
T Consensus 220 ~~ 221 (238)
T PRK05786 220 EA 221 (238)
T ss_pred cc
Confidence 54
|
|
| >PRK09291 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-31 Score=216.73 Aligned_cols=181 Identities=21% Similarity=0.286 Sum_probs=163.4
Q ss_pred CcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCcc
Q 025672 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD 91 (249)
Q Consensus 12 ~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 91 (249)
+|++|||||+||||++++++|+++|++|++++|+.+..+++.+.....+.++.++++|++|+++++.++. +++|
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------~~id 75 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAE------WDVD 75 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhc------CCCC
Confidence 5789999999999999999999999999999999887777777776666778999999999999887654 3799
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhhHH
Q 025672 92 ILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSA 171 (249)
Q Consensus 92 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~~ 171 (249)
+||||||.....++.+.+.++++..+++|+.+++.+++.+++.+.+.+. ++||++||..+..+.++...|++
T Consensus 76 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~--------~~iv~~SS~~~~~~~~~~~~Y~~ 147 (257)
T PRK09291 76 VLLNNAGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGK--------GKVVFTSSMAGLITGPFTGAYCA 147 (257)
T ss_pred EEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC--------ceEEEEcChhhccCCCCcchhHH
Confidence 9999999887778888999999999999999999999999999987653 78999999988888888889999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccccc
Q 025672 172 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTA 207 (249)
Q Consensus 172 sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~ 207 (249)
+|++++++++.++.++. +.||+++.|+||++.|+.
T Consensus 148 sK~a~~~~~~~l~~~~~-~~gi~~~~v~pg~~~t~~ 182 (257)
T PRK09291 148 SKHALEAIAEAMHAELK-PFGIQVATVNPGPYLTGF 182 (257)
T ss_pred HHHHHHHHHHHHHHHHH-hcCcEEEEEecCcccccc
Confidence 99999999999999997 889999999999998754
|
|
| >KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-32 Score=220.66 Aligned_cols=203 Identities=20% Similarity=0.261 Sum_probs=172.5
Q ss_pred CcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHh-cCCCeeEEEccCCCHHHHHHHHHHHHHHhCCc
Q 025672 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHS-LGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (249)
Q Consensus 12 ~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 90 (249)
|++++||||+.|||++.|++|+++|.+|+|++|++++++.+++|+.+ .+..+.++.+|.++.+++-+.+.+..+. ..|
T Consensus 49 g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~-~~V 127 (312)
T KOG1014|consen 49 GSWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAG-LDV 127 (312)
T ss_pred CCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcC-Cce
Confidence 59999999999999999999999999999999999999999999974 4567899999999998733333222222 257
Q ss_pred cEEEEcCCCCC--CCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchh
Q 025672 91 DILVNAAAGNF--LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH 168 (249)
Q Consensus 91 d~vi~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~ 168 (249)
.++|||+|..+ +..+.+.+...+.+.+++|..+...+++.++|.|.+++. |.||++||..+..+.|..+.
T Consensus 128 gILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~--------G~IvnigS~ag~~p~p~~s~ 199 (312)
T KOG1014|consen 128 GILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKK--------GIIVNIGSFAGLIPTPLLSV 199 (312)
T ss_pred EEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCC--------ceEEEeccccccccChhHHH
Confidence 78999999877 566777777789999999999999999999999998765 89999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccC------CCChHHHHHhhhhh
Q 025672 169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVS------KLAPEEIRSKATDY 224 (249)
Q Consensus 169 y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~------~~~~~~~~~~~~~~ 224 (249)
|+++|..+..|+++|+.|+. .+||.|.+|.|..|-|.+..- .+.++.+.+...+.
T Consensus 200 ysasK~~v~~~S~~L~~Ey~-~~gI~Vq~v~p~~VaTkm~~~~~~sl~~ps~~tfaksal~t 260 (312)
T KOG1014|consen 200 YSASKAFVDFFSRCLQKEYE-SKGIFVQSVIPYLVATKMAKYRKPSLFVPSPETFAKSALNT 260 (312)
T ss_pred HHHHHHHHHHHHHHHHHHHH-hcCeEEEEeehhheeccccccCCCCCcCcCHHHHHHHHHhh
Confidence 99999999999999999998 999999999999998765432 23345555544433
|
|
| >PRK08017 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-31 Score=215.67 Aligned_cols=220 Identities=22% Similarity=0.202 Sum_probs=179.1
Q ss_pred cEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh-CCcc
Q 025672 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF-GKLD 91 (249)
Q Consensus 13 k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~~id 91 (249)
|+++||||+|+||++++++|+++|++|++++|+.++++.+. .. .+.++.+|++|.++++.+++.+.+.. +++|
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~----~~--~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~ 76 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMN----SL--GFTGILLDLDDPESVERAADEVIALTDNRLY 76 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHH----hC--CCeEEEeecCCHHHHHHHHHHHHHhcCCCCe
Confidence 78999999999999999999999999999999987665432 21 36789999999999999999887754 6899
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhhHH
Q 025672 92 ILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSA 171 (249)
Q Consensus 92 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~~ 171 (249)
.+|||+|.....++.+.+.+++++.+++|+.|++.+++.+++.+.+.+. ++||++||..+..+.++...|++
T Consensus 77 ~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~--------~~iv~~ss~~~~~~~~~~~~Y~~ 148 (256)
T PRK08017 77 GLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHGE--------GRIVMTSSVMGLISTPGRGAYAA 148 (256)
T ss_pred EEEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCC--------CEEEEEcCcccccCCCCccHHHH
Confidence 9999999876667778899999999999999999999999999987653 78999999988888888999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhccCC
Q 025672 172 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247 (249)
Q Consensus 172 sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~ 247 (249)
+|++++.++++++.++. +.||+++.|.||+++|+.......................+.+++|+++++..+++..
T Consensus 149 sK~~~~~~~~~l~~~~~-~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~ 223 (256)
T PRK08017 149 SKYALEAWSDALRMELR-HSGIKVSLIEPGPIRTRFTDNVNQTQSDKPVENPGIAARFTLGPEAVVPKLRHALESP 223 (256)
T ss_pred HHHHHHHHHHHHHHHHh-hcCCEEEEEeCCCcccchhhcccchhhccchhhhHHHhhcCCCHHHHHHHHHHHHhCC
Confidence 99999999999999997 8899999999999987543221111100000000011123589999999999998654
|
|
| >PRK08264 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-30 Score=211.37 Aligned_cols=180 Identities=29% Similarity=0.333 Sum_probs=160.9
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHH
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 86 (249)
+++++++++||||+|+||++++++|+++|+ +|++++|+.+++++ .+.++.++.+|++|.++++++++.
T Consensus 2 ~~~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~-------~~~~~~~~~~D~~~~~~~~~~~~~---- 70 (238)
T PRK08264 2 MDIKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD-------LGPRVVPLQLDVTDPASVAAAAEA---- 70 (238)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh-------cCCceEEEEecCCCHHHHHHHHHh----
Confidence 457899999999999999999999999999 99999998765443 345789999999999999888765
Q ss_pred hCCccEEEEcCCC-CCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCcc
Q 025672 87 FGKLDILVNAAAG-NFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY 165 (249)
Q Consensus 87 ~~~id~vi~~ag~-~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~ 165 (249)
++++|+|||++|. ....++.+.+.+++...+++|+.+++.+++++.+.+.+.+. +++|++||..+..+.++
T Consensus 71 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--------~~~v~~sS~~~~~~~~~ 142 (238)
T PRK08264 71 ASDVTILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGG--------GAIVNVLSVLSWVNFPN 142 (238)
T ss_pred cCCCCEEEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC--------CEEEEEcChhhccCCCC
Confidence 4789999999998 44567778889999999999999999999999999977643 88999999999888888
Q ss_pred chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccccc
Q 025672 166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTA 207 (249)
Q Consensus 166 ~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~ 207 (249)
...|+.+|++++++++.++.++. ++||+++.+.||.++|++
T Consensus 143 ~~~y~~sK~a~~~~~~~l~~~~~-~~~i~~~~v~pg~v~t~~ 183 (238)
T PRK08264 143 LGTYSASKAAAWSLTQALRAELA-PQGTRVLGVHPGPIDTDM 183 (238)
T ss_pred chHhHHHHHHHHHHHHHHHHHhh-hcCeEEEEEeCCcccccc
Confidence 99999999999999999999998 889999999999998775
|
|
| >PRK12367 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-30 Score=212.28 Aligned_cols=204 Identities=13% Similarity=0.114 Sum_probs=154.8
Q ss_pred CCCCCCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHH
Q 025672 3 SPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVES 82 (249)
Q Consensus 3 ~~~~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~ 82 (249)
+||....+++|+++||||++|||++++++|+++|++|++++|+..... .... . + ...++.+|++|.++++.
T Consensus 5 ~~~~~~~l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~--~~~~-~-~-~~~~~~~D~~~~~~~~~---- 75 (245)
T PRK12367 5 DPMAQSTWQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNS--ESND-E-S-PNEWIKWECGKEESLDK---- 75 (245)
T ss_pred chhhHHhhCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhh--hhhc-c-C-CCeEEEeeCCCHHHHHH----
Confidence 577788899999999999999999999999999999999999863211 1111 1 1 23678999999988764
Q ss_pred HHHHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc
Q 025672 83 TINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 162 (249)
Q Consensus 83 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~ 162 (249)
.++++|++|||||.... .+.+.++|++.+++|+.+++.++++++|.|.++... .++.+++.+|..+..+
T Consensus 76 ---~~~~iDilVnnAG~~~~---~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~-----~g~~iiv~ss~a~~~~ 144 (245)
T PRK12367 76 ---QLASLDVLILNHGINPG---GRQDPENINKALEINALSSWRLLELFEDIALNNNSQ-----IPKEIWVNTSEAEIQP 144 (245)
T ss_pred ---hcCCCCEEEECCccCCc---CCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccC-----CCeEEEEEecccccCC
Confidence 35789999999997532 346789999999999999999999999999763210 0233444456555544
Q ss_pred CccchhhHHHHHHHHHHH---HHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHH
Q 025672 163 TWYQIHVSAAKAAVDSIT---RSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMA 239 (249)
Q Consensus 163 ~~~~~~y~~sK~a~~~l~---~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~ 239 (249)
++...|++||+|+..+. +.++.|+. +.||+|+.++||+++|++. + ....+|+|+|+.
T Consensus 145 -~~~~~Y~aSKaal~~~~~l~~~l~~e~~-~~~i~v~~~~pg~~~t~~~-----------------~-~~~~~~~~vA~~ 204 (245)
T PRK12367 145 -ALSPSYEISKRLIGQLVSLKKNLLDKNE-RKKLIIRKLILGPFRSELN-----------------P-IGIMSADFVAKQ 204 (245)
T ss_pred -CCCchhHHHHHHHHHHHHHHHHHHHhhc-ccccEEEEecCCCcccccC-----------------c-cCCCCHHHHHHH
Confidence 35678999999986554 44444556 7899999999999987641 0 125689999999
Q ss_pred HHHhccC
Q 025672 240 ALYLASD 246 (249)
Q Consensus 240 v~~l~s~ 246 (249)
+++.++.
T Consensus 205 i~~~~~~ 211 (245)
T PRK12367 205 ILDQANL 211 (245)
T ss_pred HHHHHhc
Confidence 9988864
|
|
| >PRK08177 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.6e-30 Score=207.80 Aligned_cols=180 Identities=20% Similarity=0.230 Sum_probs=153.6
Q ss_pred cEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCccE
Q 025672 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI 92 (249)
Q Consensus 13 k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ 92 (249)
|+++|||+++|||++++++|+++|++|++++|+.++.+.+.+ + .++.++.+|++|+++++++++.+.+ +++|+
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~-~----~~~~~~~~D~~d~~~~~~~~~~~~~--~~id~ 74 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQA-L----PGVHIEKLDMNDPASLDQLLQRLQG--QRFDL 74 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHHh-c----cccceEEcCCCCHHHHHHHHHHhhc--CCCCE
Confidence 689999999999999999999999999999999876654322 1 2577889999999999999988753 47999
Q ss_pred EEEcCCCCCC--CCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC---ccch
Q 025672 93 LVNAAAGNFL--VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT---WYQI 167 (249)
Q Consensus 93 vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~---~~~~ 167 (249)
||||+|.... .++.+.+.+++...+++|+.+++.+++.+++.+.+. .+.|+++||..+..+. .+..
T Consensus 75 vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~---------~~~iv~~ss~~g~~~~~~~~~~~ 145 (225)
T PRK08177 75 LFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPG---------QGVLAFMSSQLGSVELPDGGEMP 145 (225)
T ss_pred EEEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhc---------CCEEEEEccCccccccCCCCCcc
Confidence 9999998643 456778889999999999999999999999998643 2779999997665432 3567
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccccccc
Q 025672 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGV 209 (249)
Q Consensus 168 ~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~ 209 (249)
.|+++|++++.|++.++.|++ ++||+||+|+||+++|++..
T Consensus 146 ~Y~~sK~a~~~~~~~l~~e~~-~~~i~v~~i~PG~i~t~~~~ 186 (225)
T PRK08177 146 LYKASKAALNSMTRSFVAELG-EPTLTVLSMHPGWVKTDMGG 186 (225)
T ss_pred chHHHHHHHHHHHHHHHHHhh-cCCeEEEEEcCCceecCCCC
Confidence 899999999999999999998 88999999999999987643
|
|
| >KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2e-30 Score=208.53 Aligned_cols=217 Identities=24% Similarity=0.242 Sum_probs=187.0
Q ss_pred cEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhc--CCCeeEEEccCCCHHHHHHHHHHHHHHhCCc
Q 025672 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (249)
Q Consensus 13 k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 90 (249)
+.++|||+++|||+++|.++..+|++|.++.|+..++++++++++-. ..++.+..+|+.|.+++..++++++...+++
T Consensus 34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~~~ 113 (331)
T KOG1210|consen 34 RHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLEGPI 113 (331)
T ss_pred ceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhccCCc
Confidence 68999999999999999999999999999999999999999999633 2347899999999999999999999988999
Q ss_pred cEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhhH
Q 025672 91 DILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVS 170 (249)
Q Consensus 91 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~ 170 (249)
|.+|+|||...++-+.+.+++.++..+++|+.+.++.+++.++.|++... .|+|+.+||..+..+..++++|+
T Consensus 114 d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~-------~g~I~~vsS~~a~~~i~GysaYs 186 (331)
T KOG1210|consen 114 DNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREH-------LGRIILVSSQLAMLGIYGYSAYS 186 (331)
T ss_pred ceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhcccc-------CcEEEEehhhhhhcCcccccccc
Confidence 99999999998899999999999999999999999999999999987642 36999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCC-ChHHHHHhhhhhhc-ccCCCCHHHHHHHHH
Q 025672 171 AAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL-APEEIRSKATDYMA-AYKFGEKWDIAMAAL 241 (249)
Q Consensus 171 ~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~dva~~v~ 241 (249)
++|+|+.+|+..+++|+. ++||+|....|+.++||.+-... ..++.. ..+. .....++||+|.+++
T Consensus 187 ~sK~alrgLa~~l~qE~i-~~~v~Vt~~~P~~~~tpGfE~En~tkP~~t----~ii~g~ss~~~~e~~a~~~~ 254 (331)
T KOG1210|consen 187 PSKFALRGLAEALRQELI-KYGVHVTLYYPPDTLTPGFERENKTKPEET----KIIEGGSSVIKCEEMAKAIV 254 (331)
T ss_pred cHHHHHHHHHHHHHHHHh-hcceEEEEEcCCCCCCCccccccccCchhe----eeecCCCCCcCHHHHHHHHH
Confidence 999999999999999998 89999999999999987432211 111111 1111 112356788887765
|
|
| >PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.7e-30 Score=211.06 Aligned_cols=188 Identities=20% Similarity=0.152 Sum_probs=150.7
Q ss_pred HHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCccEEEEcCCCCCCCCCCC
Q 025672 28 ISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAED 107 (249)
Q Consensus 28 ~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~ 107 (249)
++++|+++|++|++++|+.++.+ ...++++|++|.++++++++++. +++|+||||||...
T Consensus 1 ~a~~l~~~G~~Vv~~~r~~~~~~-----------~~~~~~~Dl~~~~~v~~~~~~~~---~~iD~li~nAG~~~------ 60 (241)
T PRK12428 1 TARLLRFLGARVIGVDRREPGMT-----------LDGFIQADLGDPASIDAAVAALP---GRIDALFNIAGVPG------ 60 (241)
T ss_pred ChHHHHhCCCEEEEEeCCcchhh-----------hhHhhcccCCCHHHHHHHHHHhc---CCCeEEEECCCCCC------
Confidence 47899999999999999876532 12467899999999999998763 68999999999642
Q ss_pred CCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc--------------------------
Q 025672 108 LSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT-------------------------- 161 (249)
Q Consensus 108 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~-------------------------- 161 (249)
.++++..+++|+.+++.+++.++|.|.+. |+||++||..+..
T Consensus 61 --~~~~~~~~~vN~~~~~~l~~~~~~~~~~~----------g~Iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (241)
T PRK12428 61 --TAPVELVARVNFLGLRHLTEALLPRMAPG----------GAIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAA 128 (241)
T ss_pred --CCCHHHhhhhchHHHHHHHHHHHHhccCC----------cEEEEeCcHHhhccccchHHHHhhhccchHHHHHHhhhc
Confidence 13478999999999999999999998542 7899999988763
Q ss_pred -cCccchhhHHHHHHHHHHHHHHH-HHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHH
Q 025672 162 -ATWYQIHVSAAKAAVDSITRSLA-LEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMA 239 (249)
Q Consensus 162 -~~~~~~~y~~sK~a~~~l~~~la-~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~ 239 (249)
+.++...|++||+++.+++++++ .|++ ++||+||+|+||+++|++..................|++|+.+|||+|++
T Consensus 129 ~~~~~~~~Y~~sK~a~~~~~~~la~~e~~-~~girvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~va~~ 207 (241)
T PRK12428 129 HPVALATGYQLSKEALILWTMRQAQPWFG-ARGIRVNCVAPGPVFTPILGDFRSMLGQERVDSDAKRMGRPATADEQAAV 207 (241)
T ss_pred cCCCcccHHHHHHHHHHHHHHHHHHHhhh-ccCeEEEEeecCCccCcccccchhhhhhHhhhhcccccCCCCCHHHHHHH
Confidence 45667899999999999999999 9998 88999999999999988653321110000011123577889999999999
Q ss_pred HHHhccCCC
Q 025672 240 ALYLASDAG 248 (249)
Q Consensus 240 v~~l~s~~a 248 (249)
+.||+++++
T Consensus 208 ~~~l~s~~~ 216 (241)
T PRK12428 208 LVFLCSDAA 216 (241)
T ss_pred HHHHcChhh
Confidence 999999764
|
|
| >PRK08219 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.5e-29 Score=201.14 Aligned_cols=210 Identities=22% Similarity=0.255 Sum_probs=174.3
Q ss_pred CcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCcc
Q 025672 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD 91 (249)
Q Consensus 12 ~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 91 (249)
.|+++||||+++||+++++.|+++ ++|++++|+.++.+++.++. ..+.++++|++|+++++++++.+ +++|
T Consensus 3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~----~~id 73 (227)
T PRK08219 3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAEL----PGATPFPVDLTDPEAIAAAVEQL----GRLD 73 (227)
T ss_pred CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHh----ccceEEecCCCCHHHHHHHHHhc----CCCC
Confidence 478999999999999999999999 99999999977665554333 25788999999999999888754 5799
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhhHH
Q 025672 92 ILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSA 171 (249)
Q Consensus 92 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~~ 171 (249)
+|||++|.....++.+.+.+++.+.+++|+.+++.+++.+++.+.+.. +++|++||..+..+.++...|+.
T Consensus 74 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~---------~~~v~~ss~~~~~~~~~~~~y~~ 144 (227)
T PRK08219 74 VLVHNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAAH---------GHVVFINSGAGLRANPGWGSYAA 144 (227)
T ss_pred EEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC---------CeEEEEcchHhcCcCCCCchHHH
Confidence 999999987666777888999999999999999999999999987652 78999999998888888899999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhccCC
Q 025672 172 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247 (249)
Q Consensus 172 sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~ 247 (249)
+|.+++.+++.++.++. .. |++++|.||++.++...... .......+..++.+++|++++++++++..
T Consensus 145 ~K~a~~~~~~~~~~~~~-~~-i~~~~i~pg~~~~~~~~~~~------~~~~~~~~~~~~~~~~dva~~~~~~l~~~ 212 (227)
T PRK08219 145 SKFALRALADALREEEP-GN-VRVTSVHPGRTDTDMQRGLV------AQEGGEYDPERYLRPETVAKAVRFAVDAP 212 (227)
T ss_pred HHHHHHHHHHHHHHHhc-CC-ceEEEEecCCccchHhhhhh------hhhccccCCCCCCCHHHHHHHHHHHHcCC
Confidence 99999999999999876 54 99999999999865322111 11111223456889999999999999764
|
|
| >PRK06953 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.6e-29 Score=198.57 Aligned_cols=177 Identities=21% Similarity=0.232 Sum_probs=147.3
Q ss_pred cEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCccE
Q 025672 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI 92 (249)
Q Consensus 13 k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ 92 (249)
|+++|||++++||++++++|+++|++|++++|+.+..+++. .. .+.++++|+++.++++++++++.. +++|+
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~----~~--~~~~~~~D~~~~~~v~~~~~~~~~--~~~d~ 73 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQ----AL--GAEALALDVADPASVAGLAWKLDG--EALDA 73 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHH----hc--cceEEEecCCCHHHHHHHHHHhcC--CCCCE
Confidence 68999999999999999999999999999999876655433 22 356899999999999998876532 47999
Q ss_pred EEEcCCCCC--CCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccc---h
Q 025672 93 LVNAAAGNF--LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ---I 167 (249)
Q Consensus 93 vi~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~---~ 167 (249)
+|||+|... ..+..+.+.++++..+++|+.+++.++++++|+|.+. +|+++++||..+..+.... .
T Consensus 74 vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~---------~g~iv~isS~~~~~~~~~~~~~~ 144 (222)
T PRK06953 74 AVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAA---------GGVLAVLSSRMGSIGDATGTTGW 144 (222)
T ss_pred EEECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhcc---------CCeEEEEcCcccccccccCCCcc
Confidence 999999863 2455677899999999999999999999999988653 2789999998776553322 3
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccccccc
Q 025672 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGV 209 (249)
Q Consensus 168 ~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~ 209 (249)
.|+++|++++++++.++.++. ++++|+|+||+++|++..
T Consensus 145 ~Y~~sK~a~~~~~~~~~~~~~---~i~v~~v~Pg~i~t~~~~ 183 (222)
T PRK06953 145 LYRASKAALNDALRAASLQAR---HATCIALHPGWVRTDMGG 183 (222)
T ss_pred ccHHhHHHHHHHHHHHhhhcc---CcEEEEECCCeeecCCCC
Confidence 599999999999999998863 799999999999987643
|
|
| >KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.6e-29 Score=194.28 Aligned_cols=227 Identities=19% Similarity=0.131 Sum_probs=186.1
Q ss_pred CCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCC
Q 025672 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK 89 (249)
Q Consensus 10 l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 89 (249)
..+|++|+||+|+|||..++..+...+...+..+++....+ .....-+.++.......|++...-+.++++..++.++.
T Consensus 4 ~~r~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~-~~~L~v~~gd~~v~~~g~~~e~~~l~al~e~~r~k~gk 82 (253)
T KOG1204|consen 4 NMRKVILLTGASRGIGTGSVATILAEDDEALRYGVARLLAE-LEGLKVAYGDDFVHVVGDITEEQLLGALREAPRKKGGK 82 (253)
T ss_pred ccceEEEEecCCCCccHHHHHHHHhcchHHHHHhhhccccc-ccceEEEecCCcceechHHHHHHHHHHHHhhhhhcCCc
Confidence 45799999999999999999999988877666555544443 22222234555667778999999999999999999999
Q ss_pred ccEEEEcCCCCCCC---CCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccc
Q 025672 90 LDILVNAAAGNFLV---PAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ 166 (249)
Q Consensus 90 id~vi~~ag~~~~~---~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~ 166 (249)
.|++|||||...+. ..+..|.++|.+.++.|+++.+.|.+.++|.+++... .+.+||+||.++..|++.+
T Consensus 83 r~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~-------~~~vVnvSS~aav~p~~~w 155 (253)
T KOG1204|consen 83 RDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPV-------NGNVVNVSSLAAVRPFSSW 155 (253)
T ss_pred eeEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCc-------cCeEEEecchhhhccccHH
Confidence 99999999987642 2236788999999999999999999999999987631 2779999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCC----ChHHHHHhhhhhhcccCCCCHHHHHHHHHH
Q 025672 167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL----APEEIRSKATDYMAAYKFGEKWDIAMAALY 242 (249)
Q Consensus 167 ~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~dva~~v~~ 242 (249)
+.||++|+|.++|++.||.| ++++|++.++.||.++|.|..... -.+...+.+.+....++..+|...++.+.+
T Consensus 156 a~yc~~KaAr~m~f~~lA~E--Ep~~v~vl~~aPGvvDT~mq~~ir~~~~~~p~~l~~f~el~~~~~ll~~~~~a~~l~~ 233 (253)
T KOG1204|consen 156 AAYCSSKAARNMYFMVLASE--EPFDVRVLNYAPGVVDTQMQVCIRETSRMTPADLKMFKELKESGQLLDPQVTAKVLAK 233 (253)
T ss_pred HHhhhhHHHHHHHHHHHhhc--CccceeEEEccCCcccchhHHHHhhccCCCHHHHHHHHHHHhcCCcCChhhHHHHHHH
Confidence 99999999999999999998 347999999999999998764321 134566778888888899999999999998
Q ss_pred hccC
Q 025672 243 LASD 246 (249)
Q Consensus 243 l~s~ 246 (249)
|+..
T Consensus 234 L~e~ 237 (253)
T KOG1204|consen 234 LLEK 237 (253)
T ss_pred HHHh
Confidence 8753
|
|
| >PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.7e-26 Score=198.45 Aligned_cols=199 Identities=18% Similarity=0.216 Sum_probs=150.8
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
..+++|+++||||+||||++++++|+++|++|++++|+.++++.. .......+..+.+|++|++++.+. +
T Consensus 174 ~sl~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~---~~~~~~~v~~v~~Dvsd~~~v~~~-------l 243 (406)
T PRK07424 174 LSLKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLE---INGEDLPVKTLHWQVGQEAALAEL-------L 243 (406)
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH---HhhcCCCeEEEEeeCCCHHHHHHH-------h
Confidence 357899999999999999999999999999999999987655432 222233577889999999887654 3
Q ss_pred CCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch
Q 025672 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 167 (249)
Q Consensus 88 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~ 167 (249)
+++|++|||||.... .+.+.+++++.+++|+.+++.++++++|.|++++... .++.+|++|+ .+. ..+..+
T Consensus 244 ~~IDiLInnAGi~~~---~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~~----~~~iiVn~Ss-a~~-~~~~~~ 314 (406)
T PRK07424 244 EKVDILIINHGINVH---GERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDKA----TKEVWVNTSE-AEV-NPAFSP 314 (406)
T ss_pred CCCCEEEECCCcCCC---CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC----CCeEEEEEcc-ccc-cCCCch
Confidence 579999999997543 3578899999999999999999999999997653210 1245666665 333 334457
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhccCC
Q 025672 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247 (249)
Q Consensus 168 ~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~ 247 (249)
.|++||+|+.+|+. +.++ ..++.+..+.||+++|++. | ....+|||+|+.+++.++..
T Consensus 315 ~Y~ASKaAl~~l~~-l~~~---~~~~~I~~i~~gp~~t~~~-----------------~-~~~~spe~vA~~il~~i~~~ 372 (406)
T PRK07424 315 LYELSKRALGDLVT-LRRL---DAPCVVRKLILGPFKSNLN-----------------P-IGVMSADWVAKQILKLAKRD 372 (406)
T ss_pred HHHHHHHHHHHHHH-HHHh---CCCCceEEEEeCCCcCCCC-----------------c-CCCCCHHHHHHHHHHHHHCC
Confidence 89999999999984 4444 2357777889999986531 1 12468899999998888654
|
|
| >TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA | Back alignment and domain information |
|---|
Probab=99.95 E-value=4e-27 Score=235.79 Aligned_cols=182 Identities=18% Similarity=0.168 Sum_probs=159.3
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHc-CCeEEEEeCCc-------------------------------------------
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKH-GAAIAIMGRRK------------------------------------------- 46 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~-G~~v~l~~r~~------------------------------------------- 46 (249)
+++++|||||++|||.+++++|+++ |++|++++|+.
T Consensus 1996 ~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~ 2075 (2582)
T TIGR02813 1996 SDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRP 2075 (2582)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcccc
Confidence 5899999999999999999999998 69999999982
Q ss_pred ----chHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhH
Q 025672 47 ----TVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV 122 (249)
Q Consensus 47 ----~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 122 (249)
.+.++..+.+...|.++.++.||++|.++++++++++.+. ++||+||||||+...+.+.+.+.++|++.+++|+.
T Consensus 2076 ~~~~~ei~~~la~l~~~G~~v~y~~~DVtD~~av~~av~~v~~~-g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~nv~ 2154 (2582)
T TIGR02813 2076 VLSSLEIAQALAAFKAAGASAEYASADVTNSVSVAATVQPLNKT-LQITGIIHGAGVLADKHIQDKTLEEFNAVYGTKVD 2154 (2582)
T ss_pred cchhHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHh-CCCcEEEECCccCCCCCcccCCHHHHHHHHHHHHH
Confidence 1112223344556778999999999999999999999877 68999999999988888999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCc
Q 025672 123 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP 202 (249)
Q Consensus 123 ~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~ 202 (249)
|++++++++.+.+. ++||++||..+..+.+++..|+++|++++.+++.++.++. +++|++|+||+
T Consensus 2155 G~~~Ll~al~~~~~------------~~IV~~SSvag~~G~~gqs~YaaAkaaL~~la~~la~~~~---~irV~sI~wG~ 2219 (2582)
T TIGR02813 2155 GLLSLLAALNAENI------------KLLALFSSAAGFYGNTGQSDYAMSNDILNKAALQLKALNP---SAKVMSFNWGP 2219 (2582)
T ss_pred HHHHHHHHHHHhCC------------CeEEEEechhhcCCCCCcHHHHHHHHHHHHHHHHHHHHcC---CcEEEEEECCe
Confidence 99999999876542 4599999999999999999999999999999999999874 59999999999
Q ss_pred cccccc
Q 025672 203 IKDTAG 208 (249)
Q Consensus 203 v~t~~~ 208 (249)
++|++.
T Consensus 2220 wdtgm~ 2225 (2582)
T TIGR02813 2220 WDGGMV 2225 (2582)
T ss_pred ecCCcc
Confidence 997653
|
Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD. |
| >smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.9e-25 Score=171.06 Aligned_cols=175 Identities=21% Similarity=0.222 Sum_probs=149.5
Q ss_pred cEEEEecCCCchhHHHHHHHHHcCC-eEEEEeCCcchHHHH---HHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhC
Q 025672 13 KVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSA---VAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (249)
Q Consensus 13 k~~lItGa~~giG~~~a~~l~~~G~-~v~l~~r~~~~~~~~---~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 88 (249)
|+++||||++|||.+++++|+++|+ .|++++|+....+.. .+++...+.++.++.+|++++++++++++++.+.++
T Consensus 1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 80 (180)
T smart00822 1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEALGAEVTVVACDVADRAALAAALAAIPARLG 80 (180)
T ss_pred CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 5799999999999999999999997 688888876554332 245545567788999999999999999999988889
Q ss_pred CccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchh
Q 025672 89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH 168 (249)
Q Consensus 89 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~ 168 (249)
++|.+||++|.....++.+.+.+++++.+++|+.+++.+++.+.+ .. .++++++||..+..+.++...
T Consensus 81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~--------~~~ii~~ss~~~~~~~~~~~~ 148 (180)
T smart00822 81 PLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRD----LP--------LDFFVLFSSVAGVLGNPGQAN 148 (180)
T ss_pred CeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhcc----CC--------cceEEEEccHHHhcCCCCchh
Confidence 999999999987766777888999999999999999999998832 22 277999999999888889999
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccc
Q 025672 169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK 204 (249)
Q Consensus 169 y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~ 204 (249)
|+++|+++..+++.++ +.|+++..+.||++.
T Consensus 149 y~~sk~~~~~~~~~~~-----~~~~~~~~~~~g~~~ 179 (180)
T smart00822 149 YAAANAFLDALAAHRR-----ARGLPATSINWGAWA 179 (180)
T ss_pred hHHHHHHHHHHHHHHH-----hcCCceEEEeecccc
Confidence 9999999999997765 457889999999985
|
It uses NADPH to reduce the keto group to a hydroxy group. |
| >PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.8e-25 Score=194.10 Aligned_cols=214 Identities=13% Similarity=0.036 Sum_probs=160.7
Q ss_pred CCCCCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHh-----cC----CCeeEEEccCCCHH
Q 025672 4 PFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHS-----LG----IPAIGLEGDVRKRE 74 (249)
Q Consensus 4 ~~~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~-----~~----~~~~~~~~Dl~~~~ 74 (249)
|......+||++|||||+|+||++++++|+++|++|++++|+.++++.+.+++.. .+ .++.++.+|++|.+
T Consensus 72 ~~~~~~~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~e 151 (576)
T PLN03209 72 PKELDTKDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPD 151 (576)
T ss_pred ccccccCCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHH
Confidence 3445556799999999999999999999999999999999999888777665532 11 35889999999999
Q ss_pred HHHHHHHHHHHHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEe
Q 025672 75 DAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINI 154 (249)
Q Consensus 75 ~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~i 154 (249)
+++++ ++++|+||||+|.... ...++...+++|+.+..++++++... + .++||++
T Consensus 152 sI~~a-------LggiDiVVn~AG~~~~------~v~d~~~~~~VN~~Gt~nLl~Aa~~a----g--------VgRIV~V 206 (576)
T PLN03209 152 QIGPA-------LGNASVVICCIGASEK------EVFDVTGPYRIDYLATKNLVDAATVA----K--------VNHFILV 206 (576)
T ss_pred HHHHH-------hcCCCEEEEccccccc------cccchhhHHHHHHHHHHHHHHHHHHh----C--------CCEEEEE
Confidence 87654 3579999999986431 11246778899999999999887643 2 2789999
Q ss_pred cccccc-ccCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCH
Q 025672 155 SATLHY-TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEK 233 (249)
Q Consensus 155 ss~~~~-~~~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (249)
||..+. .+.+. ..|. +|+++..+.+.+..++. ..||+++.|+||++.|+.... ...... .......+.++..+.
T Consensus 207 SSiga~~~g~p~-~~~~-sk~~~~~~KraaE~~L~-~sGIrvTIVRPG~L~tp~d~~-~~t~~v-~~~~~d~~~gr~isr 281 (576)
T PLN03209 207 TSLGTNKVGFPA-AILN-LFWGVLCWKRKAEEALI-ASGLPYTIVRPGGMERPTDAY-KETHNL-TLSEEDTLFGGQVSN 281 (576)
T ss_pred ccchhcccCccc-cchh-hHHHHHHHHHHHHHHHH-HcCCCEEEEECCeecCCcccc-ccccce-eeccccccCCCccCH
Confidence 998763 22222 2244 78888888999999998 889999999999998653221 111111 111223566788999
Q ss_pred HHHHHHHHHhccCC
Q 025672 234 WDIAMAALYLASDA 247 (249)
Q Consensus 234 ~dva~~v~~l~s~~ 247 (249)
+|||+.++||+++.
T Consensus 282 eDVA~vVvfLasd~ 295 (576)
T PLN03209 282 LQVAELMACMAKNR 295 (576)
T ss_pred HHHHHHHHHHHcCc
Confidence 99999999999843
|
|
| >PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.4e-25 Score=171.48 Aligned_cols=174 Identities=22% Similarity=0.263 Sum_probs=139.4
Q ss_pred EEEEecCCCchhHHHHHHHHHcCC-eEEEEeCCc---chHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCC
Q 025672 14 VALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRK---TVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK 89 (249)
Q Consensus 14 ~~lItGa~~giG~~~a~~l~~~G~-~v~l~~r~~---~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 89 (249)
++|||||.+|||..++++|+++|. +|++++|+. ...++..+++...+.++.+++||++|+++++++++++.+++++
T Consensus 2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~~ 81 (181)
T PF08659_consen 2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRFGP 81 (181)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTSS-
T ss_pred EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhccCC
Confidence 799999999999999999999987 799999982 2456788888888999999999999999999999999999999
Q ss_pred ccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhh
Q 025672 90 LDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHV 169 (249)
Q Consensus 90 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y 169 (249)
|++|||+||.....++.+.++++++..+...+.+.++|.+.+.+. . -..+|.+||..+..+.+++..|
T Consensus 82 i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~----~--------l~~~i~~SSis~~~G~~gq~~Y 149 (181)
T PF08659_consen 82 IDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALENR----P--------LDFFILFSSISSLLGGPGQSAY 149 (181)
T ss_dssp EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTT----T--------TSEEEEEEEHHHHTT-TTBHHH
T ss_pred cceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhcC----C--------CCeEEEECChhHhccCcchHhH
Confidence 999999999988889999999999999999999999999888651 1 1558999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccc
Q 025672 170 SAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK 204 (249)
Q Consensus 170 ~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~ 204 (249)
+++.+.++.|++.... .|.++.+|..|.++
T Consensus 150 aaAN~~lda~a~~~~~-----~g~~~~sI~wg~W~ 179 (181)
T PF08659_consen 150 AAANAFLDALARQRRS-----RGLPAVSINWGAWD 179 (181)
T ss_dssp HHHHHHHHHHHHHHHH-----TTSEEEEEEE-EBS
T ss_pred HHHHHHHHHHHHHHHh-----CCCCEEEEEccccC
Confidence 9999999999886653 36779999988774
|
It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B .... |
| >TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.4e-23 Score=177.54 Aligned_cols=205 Identities=19% Similarity=0.126 Sum_probs=154.2
Q ss_pred CCCcEEEEecCCCchhHHHHHHHHHcC--CeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 10 LKGKVALLTGGGSGIGFEISLQLGKHG--AAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 10 l~~k~~lItGa~~giG~~~a~~l~~~G--~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
+++|++|||||+|+||++++++|+++| ++|++++|+......+.+++. +.++.++.+|++|.+++.++++
T Consensus 2 ~~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~l~~~~~------ 73 (324)
T TIGR03589 2 FNNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFP--APCLRFFIGDVRDKERLTRALR------ 73 (324)
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhC--CCcEEEEEccCCCHHHHHHHHh------
Confidence 578999999999999999999999987 689999988665544444432 2468899999999999888765
Q ss_pred CCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch
Q 025672 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 167 (249)
Q Consensus 88 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~ 167 (249)
.+|+|||+||.... +..+.+ ....+++|+.+++++++++.+. + .++||++||.....+ ..
T Consensus 74 -~iD~Vih~Ag~~~~-~~~~~~---~~~~~~~Nv~g~~~ll~aa~~~----~--------~~~iV~~SS~~~~~p---~~ 133 (324)
T TIGR03589 74 -GVDYVVHAAALKQV-PAAEYN---PFECIRTNINGAQNVIDAAIDN----G--------VKRVVALSTDKAANP---IN 133 (324)
T ss_pred -cCCEEEECcccCCC-chhhcC---HHHHHHHHHHHHHHHHHHHHHc----C--------CCEEEEEeCCCCCCC---CC
Confidence 48999999996432 222223 3468999999999999998752 2 167999999755433 46
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhh---hcc------cCCCCHHHHHH
Q 025672 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDY---MAA------YKFGEKWDIAM 238 (249)
Q Consensus 168 ~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~---~~~------~~~~~~~dva~ 238 (249)
.|+++|++.+.+++.++.+++ ..|++++++.||.+..+.. . ..+.+.+..... .+. +-+.+++|+++
T Consensus 134 ~Y~~sK~~~E~l~~~~~~~~~-~~gi~~~~lR~g~v~G~~~--~-~i~~~~~~~~~~~~~~~i~~~~~~r~~i~v~D~a~ 209 (324)
T TIGR03589 134 LYGATKLASDKLFVAANNISG-SKGTRFSVVRYGNVVGSRG--S-VVPFFKSLKEEGVTELPITDPRMTRFWITLEQGVN 209 (324)
T ss_pred HHHHHHHHHHHHHHHHHhhcc-ccCcEEEEEeecceeCCCC--C-cHHHHHHHHHhCCCCeeeCCCCceEeeEEHHHHHH
Confidence 799999999999999988877 7899999999999997532 1 122233222211 222 12578999999
Q ss_pred HHHHhccC
Q 025672 239 AALYLASD 246 (249)
Q Consensus 239 ~v~~l~s~ 246 (249)
+++.++..
T Consensus 210 a~~~al~~ 217 (324)
T TIGR03589 210 FVLKSLER 217 (324)
T ss_pred HHHHHHhh
Confidence 99988753
|
This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family. |
| >KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.92 E-value=7.8e-24 Score=165.23 Aligned_cols=192 Identities=21% Similarity=0.244 Sum_probs=164.1
Q ss_pred CcEEEEecCCCchhHHHHHHHHHcCC-----eEEEEeCCcchHHHHHHHHHhcC----CCeeEEEccCCCHHHHHHHHHH
Q 025672 12 GKVALLTGGGSGIGFEISLQLGKHGA-----AIAIMGRRKTVLRSAVAALHSLG----IPAIGLEGDVRKREDAVRVVES 82 (249)
Q Consensus 12 ~k~~lItGa~~giG~~~a~~l~~~G~-----~v~l~~r~~~~~~~~~~~~~~~~----~~~~~~~~Dl~~~~~~~~~~~~ 82 (249)
.|+++|||+++|||.+++.+|++... ++++++|+.++.|+++..+.+.. .++.++.+|++|..++.++..+
T Consensus 3 RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~d 82 (341)
T KOG1478|consen 3 RKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASKD 82 (341)
T ss_pred ceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHHH
Confidence 59999999999999999999998754 57889999999999999997653 3688999999999999999999
Q ss_pred HHHHhCCccEEEEcCCCCCCCCC---------------------------CCCCHHHHHHHHhhhhHHHHHHHHHHHHHH
Q 025672 83 TINHFGKLDILVNAAAGNFLVPA---------------------------EDLSPNGFRTVIEIDSVGTFIMCHEALKYL 135 (249)
Q Consensus 83 ~~~~~~~id~vi~~ag~~~~~~~---------------------------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~ 135 (249)
+.++|.++|.++.|||++....+ ...+.+++..+|+.|+.|++.+.+.+.|.+
T Consensus 83 i~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfyli~~l~pll 162 (341)
T KOG1478|consen 83 IKQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFYLIRELEPLL 162 (341)
T ss_pred HHHHhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchhhhHhhhhhHh
Confidence 99999999999999997654321 244567899999999999999999999999
Q ss_pred HhcCCCCCCCCCCceEEEeccccccc---------cCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccc
Q 025672 136 KKGGRGQASSSSGGIIINISATLHYT---------ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDT 206 (249)
Q Consensus 136 ~~~~~~~~~~~~~g~iv~iss~~~~~---------~~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~ 206 (249)
....+ ..+|++||..+.. ...+..+|..||.+++-+.-.+-+.+. +-|+.-..++||..- +
T Consensus 163 ~~~~~--------~~lvwtSS~~a~kk~lsleD~q~~kg~~pY~sSKrl~DlLh~A~~~~~~-~~g~~qyvv~pg~~t-t 232 (341)
T KOG1478|consen 163 CHSDN--------PQLVWTSSRMARKKNLSLEDFQHSKGKEPYSSSKRLTDLLHVALNRNFK-PLGINQYVVQPGIFT-T 232 (341)
T ss_pred hcCCC--------CeEEEEeecccccccCCHHHHhhhcCCCCcchhHHHHHHHHHHHhcccc-ccchhhhcccCceee-c
Confidence 87764 5799999987643 235677899999999999998888887 889999999999994 5
Q ss_pred cccCCCC
Q 025672 207 AGVSKLA 213 (249)
Q Consensus 207 ~~~~~~~ 213 (249)
.+.....
T Consensus 233 ~~~~~~l 239 (341)
T KOG1478|consen 233 NSFSEYL 239 (341)
T ss_pred chhhhhh
Confidence 5544443
|
|
| >PLN02989 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.1e-22 Score=172.30 Aligned_cols=210 Identities=15% Similarity=0.051 Sum_probs=154.4
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhc--CCCeeEEEccCCCHHHHHHHHHHHHHHhC
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVESTINHFG 88 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 88 (249)
++|++|||||+|+||++++++|+++|++|+++.|+....+......... ..++.++.+|++|+++++++++
T Consensus 4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------- 76 (325)
T PLN02989 4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAID------- 76 (325)
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHc-------
Confidence 5799999999999999999999999999999998876655443322211 2468899999999999888875
Q ss_pred CccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCc----
Q 025672 89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW---- 164 (249)
Q Consensus 89 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~---- 164 (249)
.+|+|||+||.... ..+.+.+...+++|+.+++++++++.+.+. .++||++||..++.+..
T Consensus 77 ~~d~vih~A~~~~~----~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~-----------~~~iv~~SS~~~~~~~~~~~~ 141 (325)
T PLN02989 77 GCETVFHTASPVAI----TVKTDPQVELINPAVNGTINVLRTCTKVSS-----------VKRVILTSSMAAVLAPETKLG 141 (325)
T ss_pred CCCEEEEeCCCCCC----CCCCChHHHHHHHHHHHHHHHHHHHHHcCC-----------ceEEEEecchhheecCCccCC
Confidence 48999999996431 233456788999999999999999886531 16799999976543210
Q ss_pred ------------------cchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCC--CChHHHHHhhhhh
Q 025672 165 ------------------YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK--LAPEEIRSKATDY 224 (249)
Q Consensus 165 ------------------~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~--~~~~~~~~~~~~~ 224 (249)
....|+.+|.+.+.+++.++++ +|+.++.+.|+.+..+..... .....+.......
T Consensus 142 ~~~~~~E~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~----~~~~~~ilR~~~vyGp~~~~~~~~~~~~i~~~~~~~ 217 (325)
T PLN02989 142 PNDVVDETFFTNPSFAEERKQWYVLSKTLAEDAAWRFAKD----NEIDLIVLNPGLVTGPILQPTLNFSVAVIVELMKGK 217 (325)
T ss_pred CCCccCcCCCCchhHhcccccchHHHHHHHHHHHHHHHHH----cCCeEEEEcCCceeCCCCCCCCCchHHHHHHHHcCC
Confidence 0246999999999999888764 369999999999997654332 1122222222222
Q ss_pred hcc----cCCCCHHHHHHHHHHhccC
Q 025672 225 MAA----YKFGEKWDIAMAALYLASD 246 (249)
Q Consensus 225 ~~~----~~~~~~~dva~~v~~l~s~ 246 (249)
.+. +.+...+|+|++++.++..
T Consensus 218 ~~~~~~~r~~i~v~Dva~a~~~~l~~ 243 (325)
T PLN02989 218 NPFNTTHHRFVDVRDVALAHVKALET 243 (325)
T ss_pred CCCCCcCcCeeEHHHHHHHHHHHhcC
Confidence 222 3466789999999988754
|
|
| >TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.4e-22 Score=173.30 Aligned_cols=214 Identities=17% Similarity=0.134 Sum_probs=156.3
Q ss_pred CCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCC
Q 025672 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK 89 (249)
Q Consensus 10 l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 89 (249)
+++|++|||||+|+||++++++|+++|++|++++|+........+.+. .+.++.++.+|++|.+++.+++++. .
T Consensus 2 ~~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~-----~ 75 (349)
T TIGR02622 2 WQGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLN-LAKKIEDHFGDIRDAAKLRKAIAEF-----K 75 (349)
T ss_pred cCCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHh-hcCCceEEEccCCCHHHHHHHHhhc-----C
Confidence 468999999999999999999999999999999998765444433332 2346778999999999999998864 5
Q ss_pred ccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc--------
Q 025672 90 LDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT-------- 161 (249)
Q Consensus 90 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~-------- 161 (249)
+|+|||+|+.... ..+.+++...+++|+.+++++++++.+. .. .+++|++||...+.
T Consensus 76 ~d~vih~A~~~~~----~~~~~~~~~~~~~N~~g~~~ll~a~~~~---~~--------~~~iv~~SS~~vyg~~~~~~~~ 140 (349)
T TIGR02622 76 PEIVFHLAAQPLV----RKSYADPLETFETNVMGTVNLLEAIRAI---GS--------VKAVVNVTSDKCYRNDEWVWGY 140 (349)
T ss_pred CCEEEECCccccc----ccchhCHHHHHHHhHHHHHHHHHHHHhc---CC--------CCEEEEEechhhhCCCCCCCCC
Confidence 8999999995322 2345567788999999999999987431 11 15799999964321
Q ss_pred ----cCccchhhHHHHHHHHHHHHHHHHHhcCC----CCeEEEEEecCccccccccC-CCChHHHHHhhhhh--hc----
Q 025672 162 ----ATWYQIHVSAAKAAVDSITRSLALEWGTD----YAIRVNGIAPGPIKDTAGVS-KLAPEEIRSKATDY--MA---- 226 (249)
Q Consensus 162 ----~~~~~~~y~~sK~a~~~l~~~la~e~~~~----~gi~v~~v~pG~v~t~~~~~-~~~~~~~~~~~~~~--~~---- 226 (249)
+..+...|+.+|.+.+.+++.++.++. + +|++++.+.|+.+..+.... ......+....... .+
T Consensus 141 ~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~-~~~~~~~i~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~g 219 (349)
T TIGR02622 141 RETDPLGGHDPYSSSKACAELVIASYRSSFF-GVANFHGIKIASARAGNVIGGGDWAEDRLIPDVIRAFSSNKIVIIRNP 219 (349)
T ss_pred ccCCCCCCCCcchhHHHHHHHHHHHHHHHhh-cccccCCCcEEEEccCcccCCCcchhhhhhHHHHHHHhcCCCeEECCC
Confidence 123456899999999999999998875 3 48999999999999764321 11112333322221 11
Q ss_pred --ccCCCCHHHHHHHHHHhcc
Q 025672 227 --AYKFGEKWDIAMAALYLAS 245 (249)
Q Consensus 227 --~~~~~~~~dva~~v~~l~s 245 (249)
.+-+...+|++++++.++.
T Consensus 220 ~~~rd~i~v~D~a~a~~~~~~ 240 (349)
T TIGR02622 220 DATRPWQHVLEPLSGYLLLAE 240 (349)
T ss_pred CcccceeeHHHHHHHHHHHHH
Confidence 1234678899999987764
|
Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose. |
| >PRK13656 trans-2-enoyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.9e-21 Score=163.58 Aligned_cols=186 Identities=16% Similarity=0.075 Sum_probs=139.9
Q ss_pred CCCcEEEEecCCCchhHH--HHHHHHHcCCeEEEEeCCcchH------------HHHHHHHHhcCCCeeEEEccCCCHHH
Q 025672 10 LKGKVALLTGGGSGIGFE--ISLQLGKHGAAIAIMGRRKTVL------------RSAVAALHSLGIPAIGLEGDVRKRED 75 (249)
Q Consensus 10 l~~k~~lItGa~~giG~~--~a~~l~~~G~~v~l~~r~~~~~------------~~~~~~~~~~~~~~~~~~~Dl~~~~~ 75 (249)
-.+|++||||+++|||.+ +|+.| +.|++|+++++..+.. +.+.+.+...|..+..+.||++++++
T Consensus 39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~ 117 (398)
T PRK13656 39 NGPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEI 117 (398)
T ss_pred CCCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHH
Confidence 347999999999999999 89999 9999988888543221 23444555556677889999999999
Q ss_pred HHHHHHHHHHHhCCccEEEEcCCCCCCCC-----------------CC-----------------CCCHHHHHHHHhhhh
Q 025672 76 AVRVVESTINHFGKLDILVNAAAGNFLVP-----------------AE-----------------DLSPNGFRTVIEIDS 121 (249)
Q Consensus 76 ~~~~~~~~~~~~~~id~vi~~ag~~~~~~-----------------~~-----------------~~~~~~~~~~~~~n~ 121 (249)
++++++++.+.+|+||+||||+|...... +. ..+.++++.++++.-
T Consensus 118 v~~lie~I~e~~G~IDiLVnSaA~~~r~~p~~g~~~~s~lKpi~~~~~~~~~d~~~~~i~~~s~~~~~~~ei~~Tv~vMg 197 (398)
T PRK13656 118 KQKVIELIKQDLGQVDLVVYSLASPRRTDPKTGEVYRSVLKPIGEPYTGKTLDTDKDVIIEVTVEPATEEEIADTVKVMG 197 (398)
T ss_pred HHHHHHHHHHhcCCCCEEEECCccCCCCCcccCceeecccccccccccCCcccccccceeEEEEeeCCHHHHHHHHHhhc
Confidence 99999999999999999999999763311 11 233444544443322
Q ss_pred H-HHHHHHHHH--HHHHHhcCCCCCCCCCCceEEEeccccccccCccc--hhhHHHHHHHHHHHHHHHHHhcCCCCeEEE
Q 025672 122 V-GTFIMCHEA--LKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ--IHVSAAKAAVDSITRSLALEWGTDYAIRVN 196 (249)
Q Consensus 122 ~-~~~~l~~~~--~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~--~~y~~sK~a~~~l~~~la~e~~~~~gi~v~ 196 (249)
. .-..+++++ .+.|.+ ++++|..|........|.+ ..-+.+|++++.-+|.|+.+|+ +.|||+|
T Consensus 198 gedw~~Wi~al~~a~lla~----------g~~~va~TY~G~~~t~p~Y~~g~mG~AKa~LE~~~r~La~~L~-~~giran 266 (398)
T PRK13656 198 GEDWELWIDALDEAGVLAE----------GAKTVAYSYIGPELTHPIYWDGTIGKAKKDLDRTALALNEKLA-AKGGDAY 266 (398)
T ss_pred cchHHHHHHHHHhcccccC----------CcEEEEEecCCcceeecccCCchHHHHHHHHHHHHHHHHHHhh-hcCCEEE
Confidence 2 113333333 333432 4889999998777776665 4779999999999999999999 8899999
Q ss_pred EEecCcccccc
Q 025672 197 GIAPGPIKDTA 207 (249)
Q Consensus 197 ~v~pG~v~t~~ 207 (249)
++.+|++.|..
T Consensus 267 ~i~~g~~~T~A 277 (398)
T PRK13656 267 VSVLKAVVTQA 277 (398)
T ss_pred EEecCcccchh
Confidence 99999999753
|
|
| >PRK06720 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.9e-21 Score=148.83 Aligned_cols=149 Identities=26% Similarity=0.274 Sum_probs=123.0
Q ss_pred CCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHH
Q 025672 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (249)
Q Consensus 7 ~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 86 (249)
.+.+++|+++||||++|||.++++.|+++|++|++++|+.+.++...+++...+.+..++.+|+++.++++++++++.+.
T Consensus 11 ~~~l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~ 90 (169)
T PRK06720 11 KMKLAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNA 90 (169)
T ss_pred ccccCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 35578999999999999999999999999999999999988888777887766777888999999999999999999999
Q ss_pred hCCccEEEEcCCCCCC-CCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccc
Q 025672 87 FGKLDILVNAAAGNFL-VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH 159 (249)
Q Consensus 87 ~~~id~vi~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~ 159 (249)
+|++|++|||||.... .++.+.+.++ ++ .+|+.+.+..++.+.+.|.+++.. ......|++..+|+...
T Consensus 91 ~G~iDilVnnAG~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 160 (169)
T PRK06720 91 FSRIDMLFQNAGLYKIDSIFSRQQEND-SN--VLCINDVWIEIKQLTSSFMKQQEE-VVLSDLPIFGIIGTKGQ 160 (169)
T ss_pred cCCCCEEEECCCcCCCCCcccccchhH-hh--ceeccHHHHHHHHHHHHHHhcCCE-EEeecCceeeEeccccc
Confidence 9999999999998764 4444445444 33 677788889999999998876432 22344688999988654
|
|
| >PLN02572 UDP-sulfoquinovose synthase | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.1e-20 Score=165.84 Aligned_cols=221 Identities=14% Similarity=0.113 Sum_probs=153.9
Q ss_pred CCCCCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcch-----------------HHHHHHHHH-hcCCCeeE
Q 025672 4 PFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTV-----------------LRSAVAALH-SLGIPAIG 65 (249)
Q Consensus 4 ~~~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~-----------------~~~~~~~~~-~~~~~~~~ 65 (249)
|....++++|++|||||+|+||++++++|+++|++|+++++.... .+.+ +.+. ..+.++.+
T Consensus 39 ~~~~~~~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~v~~ 117 (442)
T PLN02572 39 PGSSSSSKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERV-RRWKEVSGKEIEL 117 (442)
T ss_pred CCCCccccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHH-HHHHHhhCCcceE
Confidence 456677899999999999999999999999999999998753211 0111 1111 12346889
Q ss_pred EEccCCCHHHHHHHHHHHHHHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCC
Q 025672 66 LEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASS 145 (249)
Q Consensus 66 ~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ 145 (249)
+.+|++|.+++.+++++. ++|+|||+|+... .+....++++++..+++|+.|++++++++...-.+
T Consensus 118 v~~Dl~d~~~v~~~l~~~-----~~D~ViHlAa~~~-~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~gv~-------- 183 (442)
T PLN02572 118 YVGDICDFEFLSEAFKSF-----EPDAVVHFGEQRS-APYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFAPD-------- 183 (442)
T ss_pred EECCCCCHHHHHHHHHhC-----CCCEEEECCCccc-ChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhCCC--------
Confidence 999999999999998864 6999999997533 23344456667888999999999999988654211
Q ss_pred CCCceEEEecccccccc------------------------CccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecC
Q 025672 146 SSGGIIINISATLHYTA------------------------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG 201 (249)
Q Consensus 146 ~~~g~iv~iss~~~~~~------------------------~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG 201 (249)
.++|++||...+.. ..+...|+.||.+.+.+.+..++. +|+.+..+.|+
T Consensus 184 ---~~~V~~SS~~vYG~~~~~~~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~----~gl~~v~lR~~ 256 (442)
T PLN02572 184 ---CHLVKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKA----WGIRATDLNQG 256 (442)
T ss_pred ---ccEEEEecceecCCCCCCCcccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHh----cCCCEEEEecc
Confidence 35999988754321 112357999999999888877654 47999999999
Q ss_pred ccccccccCCC-----------------ChHHHHHhh-hhh-hc-------ccCCCCHHHHHHHHHHhccC
Q 025672 202 PIKDTAGVSKL-----------------APEEIRSKA-TDY-MA-------AYKFGEKWDIAMAALYLASD 246 (249)
Q Consensus 202 ~v~t~~~~~~~-----------------~~~~~~~~~-~~~-~~-------~~~~~~~~dva~~v~~l~s~ 246 (249)
.+..+...... ....+.... ... +. .+-+...+|++++++.++..
T Consensus 257 ~vyGp~~~~~~~~~~li~~~~~~~~~~~~i~~~~~~~~~g~~i~v~g~G~~~Rdfi~V~Dva~a~~~al~~ 327 (442)
T PLN02572 257 VVYGVRTDETMMDEELINRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGFLDIRDTVRCIEIAIAN 327 (442)
T ss_pred cccCCCCcccccccccccccCcccchhhHHHHHHHHHhcCCCceecCCCCEEECeEEHHHHHHHHHHHHhC
Confidence 99876532210 011111111 111 11 12456799999999998863
|
|
| >PLN02986 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.5e-20 Score=157.58 Aligned_cols=210 Identities=17% Similarity=0.086 Sum_probs=148.8
Q ss_pred CCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHh--cCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHS--LGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 10 l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
-.+|+++||||+|+||++++++|+++|++|+++.|+....+...+.... ...++.++.+|++|+++++.+++
T Consensus 3 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------ 76 (322)
T PLN02986 3 GGGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIE------ 76 (322)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHh------
Confidence 4589999999999999999999999999999999987655544333221 12468899999999999888876
Q ss_pred CCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc-cC---
Q 025672 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT-AT--- 163 (249)
Q Consensus 88 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~-~~--- 163 (249)
.+|+|||+|+..... . .+...+.+++|+.++.++++++... .. -.+||++||..... +.
T Consensus 77 -~~d~vih~A~~~~~~---~--~~~~~~~~~~nv~gt~~ll~~~~~~---~~--------v~rvV~~SS~~~~~~~~~~~ 139 (322)
T PLN02986 77 -GCDAVFHTASPVFFT---V--KDPQTELIDPALKGTINVLNTCKET---PS--------VKRVILTSSTAAVLFRQPPI 139 (322)
T ss_pred -CCCEEEEeCCCcCCC---C--CCchhhhhHHHHHHHHHHHHHHHhc---CC--------ccEEEEecchhheecCCccC
Confidence 489999999964321 1 1223567899999999999887532 11 15799999976431 11
Q ss_pred -------------c-----cchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCC-hHHHHHhhhhh
Q 025672 164 -------------W-----YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA-PEEIRSKATDY 224 (249)
Q Consensus 164 -------------~-----~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~-~~~~~~~~~~~ 224 (249)
+ ....|+.||.+.+.+++.+.++ +|+.++.+.|+.+.++....... .......+...
T Consensus 140 ~~~~~~~E~~~~~p~~~~~~~~~Y~~sK~~aE~~~~~~~~~----~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g 215 (322)
T PLN02986 140 EANDVVDETFFSDPSLCRETKNWYPLSKILAENAAWEFAKD----NGIDMVVLNPGFICGPLLQPTLNFSVELIVDFING 215 (322)
T ss_pred CCCCCcCcccCCChHHhhccccchHHHHHHHHHHHHHHHHH----hCCeEEEEcccceeCCCCCCCCCccHHHHHHHHcC
Confidence 0 1356999999999888887654 36999999999999775432211 11222222111
Q ss_pred h-----cccCCCCHHHHHHHHHHhccC
Q 025672 225 M-----AAYKFGEKWDIAMAALYLASD 246 (249)
Q Consensus 225 ~-----~~~~~~~~~dva~~v~~l~s~ 246 (249)
. ....+...+|+|++++.++..
T Consensus 216 ~~~~~~~~~~~v~v~Dva~a~~~al~~ 242 (322)
T PLN02986 216 KNLFNNRFYRFVDVRDVALAHIKALET 242 (322)
T ss_pred CCCCCCcCcceeEHHHHHHHHHHHhcC
Confidence 1 112467899999999988864
|
|
| >PLN02653 GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.3e-20 Score=159.00 Aligned_cols=220 Identities=18% Similarity=0.068 Sum_probs=146.2
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcch-----HHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHH
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTV-----LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVES 82 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~-----~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~ 82 (249)
.++++|++|||||+|+||++++++|+++|++|++++|+... ++.+..+....+.++.++.+|++|.+++.++++.
T Consensus 2 ~~~~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~ 81 (340)
T PLN02653 2 GDPPRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDD 81 (340)
T ss_pred CCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHH
Confidence 46788999999999999999999999999999999987543 2222211111234688999999999999999886
Q ss_pred HHHHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc
Q 025672 83 TINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 162 (249)
Q Consensus 83 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~ 162 (249)
. .+|+|||+|+..... ...+.....+++|+.++.++++++.+.+.++.. .-++|++||...+..
T Consensus 82 ~-----~~d~Vih~A~~~~~~----~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~-------~~~~v~~Ss~~vyg~ 145 (340)
T PLN02653 82 I-----KPDEVYNLAAQSHVA----VSFEMPDYTADVVATGALRLLEAVRLHGQETGR-------QIKYYQAGSSEMYGS 145 (340)
T ss_pred c-----CCCEEEECCcccchh----hhhhChhHHHHHHHHHHHHHHHHHHHhcccccc-------ceeEEEeccHHHhCC
Confidence 5 589999999975422 123345677899999999999999887654210 025888887533221
Q ss_pred ----------CccchhhHHHHHHHHHHHHHHHHHhcC--CCCeEEEEEecCccccccccCCCChHHHHHhhhhh--h---
Q 025672 163 ----------TWYQIHVSAAKAAVDSITRSLALEWGT--DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDY--M--- 225 (249)
Q Consensus 163 ----------~~~~~~y~~sK~a~~~l~~~la~e~~~--~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~--~--- 225 (249)
..+...|+.||.+.+.+++.++.+++- ..++.++.+.|+...+ ..... ...+...+... .
T Consensus 146 ~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~--~~~~~-~~~~~~~~~~~~~~~~~ 222 (340)
T PLN02653 146 TPPPQSETTPFHPRSPYAVAKVAAHWYTVNYREAYGLFACNGILFNHESPRRGEN--FVTRK-ITRAVGRIKVGLQKKLF 222 (340)
T ss_pred CCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHcCCeEEEeeeccccCCCCCcc--cchhH-HHHHHHHHHcCCCCceE
Confidence 123567999999999999999887640 1223344444543221 10000 01111111111 1
Q ss_pred -----cccCCCCHHHHHHHHHHhccC
Q 025672 226 -----AAYKFGEKWDIAMAALYLASD 246 (249)
Q Consensus 226 -----~~~~~~~~~dva~~v~~l~s~ 246 (249)
..+-+...+|++++++.++..
T Consensus 223 ~g~g~~~rd~i~v~D~a~a~~~~~~~ 248 (340)
T PLN02653 223 LGNLDASRDWGFAGDYVEAMWLMLQQ 248 (340)
T ss_pred eCCCcceecceeHHHHHHHHHHHHhc
Confidence 112356899999999998864
|
|
| >PLN02650 dihydroflavonol-4-reductase | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.9e-20 Score=160.18 Aligned_cols=208 Identities=13% Similarity=0.066 Sum_probs=149.7
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhc--CCCeeEEEccCCCHHHHHHHHHHHHHHhC
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVESTINHFG 88 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 88 (249)
+.|++|||||+|+||++++++|+++|++|++++|+.+..+.+....... ..++.++.+|++|.+.++.+++
T Consensus 4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~------- 76 (351)
T PLN02650 4 QKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIR------- 76 (351)
T ss_pred CCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHh-------
Confidence 5789999999999999999999999999999999876655544333211 2358899999999999888765
Q ss_pred CccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC----c
Q 025672 89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT----W 164 (249)
Q Consensus 89 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~----~ 164 (249)
.+|.|||+|+.... .. .+.....+++|+.+++++++++.+... ..+||++||...+.+. +
T Consensus 77 ~~d~ViH~A~~~~~---~~--~~~~~~~~~~Nv~gt~~ll~aa~~~~~-----------~~r~v~~SS~~~~~~~~~~~~ 140 (351)
T PLN02650 77 GCTGVFHVATPMDF---ES--KDPENEVIKPTVNGMLSIMKACAKAKT-----------VRRIVFTSSAGTVNVEEHQKP 140 (351)
T ss_pred CCCEEEEeCCCCCC---CC--CCchhhhhhHHHHHHHHHHHHHHhcCC-----------ceEEEEecchhhcccCCCCCC
Confidence 48999999985431 11 122356789999999999999875421 1469999987433210 0
Q ss_pred ------------------cchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhh---hh
Q 025672 165 ------------------YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKA---TD 223 (249)
Q Consensus 165 ------------------~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~---~~ 223 (249)
+...|+.||.+.+.+++.++++ +|++++.+.|+.+.++.......+ .+...+ ..
T Consensus 141 ~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~----~gi~~~ilRp~~v~Gp~~~~~~~~-~~~~~~~~~~~ 215 (351)
T PLN02650 141 VYDEDCWSDLDFCRRKKMTGWMYFVSKTLAEKAAWKYAAE----NGLDFISIIPTLVVGPFISTSMPP-SLITALSLITG 215 (351)
T ss_pred ccCcccCCchhhhhccccccchHHHHHHHHHHHHHHHHHH----cCCeEEEECCCceECCCCCCCCCc-cHHHHHHHhcC
Confidence 1237999999999999888765 379999999999998754332221 111111 11
Q ss_pred h------hcccCCCCHHHHHHHHHHhccC
Q 025672 224 Y------MAAYKFGEKWDIAMAALYLASD 246 (249)
Q Consensus 224 ~------~~~~~~~~~~dva~~v~~l~s~ 246 (249)
. ...+.+...+|+++++++++..
T Consensus 216 ~~~~~~~~~~r~~v~V~Dva~a~~~~l~~ 244 (351)
T PLN02650 216 NEAHYSIIKQGQFVHLDDLCNAHIFLFEH 244 (351)
T ss_pred CccccCcCCCcceeeHHHHHHHHHHHhcC
Confidence 0 1124578899999999999864
|
|
| >PLN02896 cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.87 E-value=3.9e-20 Score=158.35 Aligned_cols=215 Identities=15% Similarity=0.052 Sum_probs=151.7
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
..-+++++|||||+|+||++++++|+++|++|++++|+....+.+...+.. +.++.++.+|++|.+++.++++
T Consensus 6 ~~~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~------ 78 (353)
T PLN02896 6 RESATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKE-GDRLRLFRADLQEEGSFDEAVK------ 78 (353)
T ss_pred cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhcc-CCeEEEEECCCCCHHHHHHHHc------
Confidence 344688999999999999999999999999999999987665555554432 4568899999999999887764
Q ss_pred CCccEEEEcCCCCCCCC-CCCCCHHHH--HHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC-
Q 025672 88 GKLDILVNAAAGNFLVP-AEDLSPNGF--RTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT- 163 (249)
Q Consensus 88 ~~id~vi~~ag~~~~~~-~~~~~~~~~--~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~- 163 (249)
.+|+|||+|+...... ....+++.+ .+.+++|+.+++++++++.+.. . .++||++||...+...
T Consensus 79 -~~d~Vih~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~---~--------~~~~v~~SS~~vyg~~~ 146 (353)
T PLN02896 79 -GCDGVFHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSK---T--------VKRVVFTSSISTLTAKD 146 (353)
T ss_pred -CCCEEEECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcC---C--------ccEEEEEechhhccccc
Confidence 4899999999754321 122233333 4677888899999999887542 1 1569999996544210
Q ss_pred ------------------------ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCCh--HHH
Q 025672 164 ------------------------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP--EEI 217 (249)
Q Consensus 164 ------------------------~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~--~~~ 217 (249)
++...|+.||.+.+.+++.++++ +|++++.+.|+.+..+........ ...
T Consensus 147 ~~~~~~~~~~E~~~~p~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~----~~~~~~~lR~~~vyGp~~~~~~~~~~~~~ 222 (353)
T PLN02896 147 SNGRWRAVVDETCQTPIDHVWNTKASGWVYVLSKLLTEEAAFKYAKE----NGIDLVSVITTTVAGPFLTPSVPSSIQVL 222 (353)
T ss_pred cCCCCCCccCcccCCcHHHhhccCCCCccHHHHHHHHHHHHHHHHHH----cCCeEEEEcCCcccCCCcCCCCCchHHHH
Confidence 01137999999999999888764 369999999999987754322211 111
Q ss_pred HHhhhhhh---c----------ccCCCCHHHHHHHHHHhcc
Q 025672 218 RSKATDYM---A----------AYKFGEKWDIAMAALYLAS 245 (249)
Q Consensus 218 ~~~~~~~~---~----------~~~~~~~~dva~~v~~l~s 245 (249)
...+.... + .+-+...+|++++++.++.
T Consensus 223 ~~~~~g~~~~~~~~~~~~~~~~~~dfi~v~Dva~a~~~~l~ 263 (353)
T PLN02896 223 LSPITGDSKLFSILSAVNSRMGSIALVHIEDICDAHIFLME 263 (353)
T ss_pred HHHhcCCccccccccccccccCceeEEeHHHHHHHHHHHHh
Confidence 11111110 0 0125689999999999885
|
|
| >PLN02583 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.6e-20 Score=155.79 Aligned_cols=206 Identities=10% Similarity=0.038 Sum_probs=143.7
Q ss_pred CCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcch--HHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTV--LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 10 l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~--~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
-++|+++||||+|+||++++++|+++|++|+++.|+... .+.....+...+.++.++++|++|.+++.+++.
T Consensus 4 ~~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~l~------ 77 (297)
T PLN02583 4 ESSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSCEEERLKVFDVDPLDYHSILDALK------ 77 (297)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhcccCCCceEEEEecCCCHHHHHHHHc------
Confidence 357899999999999999999999999999999986432 222233332224568899999999998876653
Q ss_pred CCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC----
Q 025672 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT---- 163 (249)
Q Consensus 88 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~---- 163 (249)
..|.++|.++.... . ..+++..+++|+.+++++++++.+.+. .++||++||..+....
T Consensus 78 -~~d~v~~~~~~~~~-----~-~~~~~~~~~~nv~gt~~ll~aa~~~~~-----------v~riV~~SS~~a~~~~~~~~ 139 (297)
T PLN02583 78 -GCSGLFCCFDPPSD-----Y-PSYDEKMVDVEVRAAHNVLEACAQTDT-----------IEKVVFTSSLTAVIWRDDNI 139 (297)
T ss_pred -CCCEEEEeCccCCc-----c-cccHHHHHHHHHHHHHHHHHHHHhcCC-----------ccEEEEecchHheecccccC
Confidence 57899887653211 1 124578999999999999999986531 1579999997654211
Q ss_pred ----------cc--c------hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhh
Q 025672 164 ----------WY--Q------IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYM 225 (249)
Q Consensus 164 ----------~~--~------~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~ 225 (249)
+. . ..|+.||...+.+++.++++ .|+++++|.|++|.++...... ..........
T Consensus 140 ~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~aE~~~~~~~~~----~gi~~v~lrp~~v~Gp~~~~~~---~~~~~~~~~~ 212 (297)
T PLN02583 140 STQKDVDERSWSDQNFCRKFKLWHALAKTLSEKTAWALAMD----RGVNMVSINAGLLMGPSLTQHN---PYLKGAAQMY 212 (297)
T ss_pred CCCCCCCcccCCCHHHHhhcccHHHHHHHHHHHHHHHHHHH----hCCcEEEEcCCcccCCCCCCch---hhhcCCcccC
Confidence 00 0 15899999888888877654 3799999999999976442211 1111100111
Q ss_pred c--ccCCCCHHHHHHHHHHhccC
Q 025672 226 A--AYKFGEKWDIAMAALYLASD 246 (249)
Q Consensus 226 ~--~~~~~~~~dva~~v~~l~s~ 246 (249)
+ ...+.+.+|+|++++..+.+
T Consensus 213 ~~~~~~~v~V~Dva~a~~~al~~ 235 (297)
T PLN02583 213 ENGVLVTVDVNFLVDAHIRAFED 235 (297)
T ss_pred cccCcceEEHHHHHHHHHHHhcC
Confidence 1 12367889999999998864
|
|
| >PLN00198 anthocyanidin reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.2e-19 Score=154.51 Aligned_cols=210 Identities=16% Similarity=0.065 Sum_probs=146.8
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHH--HHHhcCCCeeEEEccCCCHHHHHHHHHHHHHH
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVA--ALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~--~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 86 (249)
.++++++|||||+|+||++++++|+++|++|+++.|+.+....... .+.. ..++.++.+|++|++++..+++
T Consensus 6 ~~~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~----- 79 (338)
T PLN00198 6 PTGKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAHLRALQE-LGDLKIFGADLTDEESFEAPIA----- 79 (338)
T ss_pred CCCCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHhcCC-CCceEEEEcCCCChHHHHHHHh-----
Confidence 3558999999999999999999999999999988888655433221 1211 1258899999999998887764
Q ss_pred hCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc----
Q 025672 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA---- 162 (249)
Q Consensus 87 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~---- 162 (249)
.+|+|||+|+... .. ..+.....+++|+.++.++++++.+.. + .++||++||...+..
T Consensus 80 --~~d~vih~A~~~~---~~--~~~~~~~~~~~nv~g~~~ll~a~~~~~---~--------~~~~v~~SS~~~~g~~~~~ 141 (338)
T PLN00198 80 --GCDLVFHVATPVN---FA--SEDPENDMIKPAIQGVHNVLKACAKAK---S--------VKRVILTSSAAAVSINKLS 141 (338)
T ss_pred --cCCEEEEeCCCCc---cC--CCChHHHHHHHHHHHHHHHHHHHHhcC---C--------ccEEEEeecceeeeccCCC
Confidence 5899999998532 11 122345678999999999999987531 1 157999999765431
Q ss_pred --------------------CccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCCh--HHHHHh
Q 025672 163 --------------------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP--EEIRSK 220 (249)
Q Consensus 163 --------------------~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~--~~~~~~ 220 (249)
.++...|+.||.+.+.+++.++.+ +|++++.+.|+.|..+........ ......
T Consensus 142 ~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~----~~~~~~~~R~~~vyGp~~~~~~~~~~~~~~~~ 217 (338)
T PLN00198 142 GTGLVMNEKNWTDVEFLTSEKPPTWGYPASKTLAEKAAWKFAEE----NNIDLITVIPTLMAGPSLTSDIPSSLSLAMSL 217 (338)
T ss_pred CCCceeccccCCchhhhhhcCCccchhHHHHHHHHHHHHHHHHh----cCceEEEEeCCceECCCccCCCCCcHHHHHHH
Confidence 113456999999999999888754 469999999999997643221110 001111
Q ss_pred hhhh---------hcc----cCCCCHHHHHHHHHHhccC
Q 025672 221 ATDY---------MAA----YKFGEKWDIAMAALYLASD 246 (249)
Q Consensus 221 ~~~~---------~~~----~~~~~~~dva~~v~~l~s~ 246 (249)
.... .+. .-+...+|++++++.++..
T Consensus 218 ~~~~~~~~~g~~~~~~~~~~~~~i~V~D~a~a~~~~~~~ 256 (338)
T PLN00198 218 ITGNEFLINGLKGMQMLSGSISITHVEDVCRAHIFLAEK 256 (338)
T ss_pred HcCCccccccccccccccCCcceeEHHHHHHHHHHHhhC
Confidence 1100 011 2467899999999998864
|
|
| >PLN02214 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.86 E-value=9.7e-20 Score=155.24 Aligned_cols=206 Identities=14% Similarity=0.044 Sum_probs=148.0
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHH-HHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSA-VAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~-~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
.+++|+++||||+|+||++++++|+++|++|++++|+.+..... ...+.....++.++.+|++|.++++.+++
T Consensus 7 ~~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------ 80 (342)
T PLN02214 7 SPAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDYEALKAAID------ 80 (342)
T ss_pred cCCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCChHHHHHHHh------
Confidence 35689999999999999999999999999999999986643221 22232223468899999999999888875
Q ss_pred CCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC----
Q 025672 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT---- 163 (249)
Q Consensus 88 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~---- 163 (249)
.+|+|||+|+... +++...+++|+.++.++++++.+. +. .+||++||..+.++.
T Consensus 81 -~~d~Vih~A~~~~---------~~~~~~~~~nv~gt~~ll~aa~~~----~v--------~r~V~~SS~~avyg~~~~~ 138 (342)
T PLN02214 81 -GCDGVFHTASPVT---------DDPEQMVEPAVNGAKFVINAAAEA----KV--------KRVVITSSIGAVYMDPNRD 138 (342)
T ss_pred -cCCEEEEecCCCC---------CCHHHHHHHHHHHHHHHHHHHHhc----CC--------CEEEEeccceeeeccCCCC
Confidence 4899999998531 235678999999999999988642 11 569999996543311
Q ss_pred c-----------------cchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCC--hHHHHHhhhhh
Q 025672 164 W-----------------YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA--PEEIRSKATDY 224 (249)
Q Consensus 164 ~-----------------~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~--~~~~~~~~~~~ 224 (249)
+ +...|+.+|.+.+.+++.++.++ |++++.+.|+.|..+....... ...+...+...
T Consensus 139 ~~~~~~E~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~----g~~~v~lRp~~vyGp~~~~~~~~~~~~~~~~~~g~ 214 (342)
T PLN02214 139 PEAVVDESCWSDLDFCKNTKNWYCYGKMVAEQAAWETAKEK----GVDLVVLNPVLVLGPPLQPTINASLYHVLKYLTGS 214 (342)
T ss_pred CCcccCcccCCChhhccccccHHHHHHHHHHHHHHHHHHHc----CCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCC
Confidence 0 23469999999999998887653 6999999999999775432211 11111211111
Q ss_pred hc-----ccCCCCHHHHHHHHHHhccC
Q 025672 225 MA-----AYKFGEKWDIAMAALYLASD 246 (249)
Q Consensus 225 ~~-----~~~~~~~~dva~~v~~l~s~ 246 (249)
.+ .+-+...+|+|++++.++..
T Consensus 215 ~~~~~~~~~~~i~V~Dva~a~~~al~~ 241 (342)
T PLN02214 215 AKTYANLTQAYVDVRDVALAHVLVYEA 241 (342)
T ss_pred cccCCCCCcCeeEHHHHHHHHHHHHhC
Confidence 11 12356799999999998864
|
|
| >PRK10217 dTDP-glucose 4,6-dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.5e-19 Score=154.92 Aligned_cols=216 Identities=18% Similarity=0.112 Sum_probs=146.8
Q ss_pred cEEEEecCCCchhHHHHHHHHHcCCeEE-EEeCCcch--HHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCC
Q 025672 13 KVALLTGGGSGIGFEISLQLGKHGAAIA-IMGRRKTV--LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK 89 (249)
Q Consensus 13 k~~lItGa~~giG~~~a~~l~~~G~~v~-l~~r~~~~--~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 89 (249)
|++|||||+|+||+++++.|+++|++++ ++++.... ..... .+ ..+.++.++.+|++|.+++++++++. +
T Consensus 2 ~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~ 74 (355)
T PRK10217 2 RKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLA-PV-AQSERFAFEKVDICDRAELARVFTEH-----Q 74 (355)
T ss_pred cEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccccchhhhh-hc-ccCCceEEEECCCcChHHHHHHHhhc-----C
Confidence 5799999999999999999999998754 55554321 11111 11 12346788999999999999988752 6
Q ss_pred ccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc--------
Q 025672 90 LDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT-------- 161 (249)
Q Consensus 90 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~-------- 161 (249)
+|+|||+||.... +.+.+++...+++|+.+++++++++.+.+..-.. ......++|++||...+.
T Consensus 75 ~D~Vih~A~~~~~----~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~---~~~~~~~~i~~SS~~vyg~~~~~~~~ 147 (355)
T PRK10217 75 PDCVMHLAAESHV----DRSIDGPAAFIETNIVGTYTLLEAARAYWNALTE---DKKSAFRFHHISTDEVYGDLHSTDDF 147 (355)
T ss_pred CCEEEECCcccCc----chhhhChHHHHHHhhHHHHHHHHHHHHhhhcccc---cccCceEEEEecchhhcCCCCCCCCC
Confidence 9999999996432 2334567889999999999999999876421100 000014799999854321
Q ss_pred -----cCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHH-hhhhh-hc-------c
Q 025672 162 -----ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRS-KATDY-MA-------A 227 (249)
Q Consensus 162 -----~~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~-~~~~~-~~-------~ 227 (249)
+..+...|+.||.+.+.+++.+++++ ++++..+.|+.+..+..........+.. ..... ++ .
T Consensus 148 ~~E~~~~~p~s~Y~~sK~~~e~~~~~~~~~~----~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~ 223 (355)
T PRK10217 148 FTETTPYAPSSPYSASKASSDHLVRAWLRTY----GLPTLITNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQI 223 (355)
T ss_pred cCCCCCCCCCChhHHHHHHHHHHHHHHHHHh----CCCeEEEeeeeeeCCCCCcccHHHHHHHHHhcCCCceEeCCCCee
Confidence 22346679999999999999998764 5888889999998664322111112222 22111 22 1
Q ss_pred cCCCCHHHHHHHHHHhccC
Q 025672 228 YKFGEKWDIAMAALYLASD 246 (249)
Q Consensus 228 ~~~~~~~dva~~v~~l~s~ 246 (249)
.-+...+|+++++..++..
T Consensus 224 ~~~i~v~D~a~a~~~~~~~ 242 (355)
T PRK10217 224 RDWLYVEDHARALYCVATT 242 (355)
T ss_pred eCcCcHHHHHHHHHHHHhc
Confidence 2357899999999888754
|
|
| >KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.3e-19 Score=147.56 Aligned_cols=210 Identities=14% Similarity=0.107 Sum_probs=152.5
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHH--HHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhC
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRS--AVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~--~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 88 (249)
.+++|+||||+|.||.+++++|+++|++|..+.|++++.+. ...+++....+++.+..|++|+++++.+++
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~------- 77 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAID------- 77 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHh-------
Confidence 68999999999999999999999999999999999887444 355555556679999999999999999987
Q ss_pred CccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC-----
Q 025672 89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT----- 163 (249)
Q Consensus 89 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~----- 163 (249)
..|+|+|.|........ + .-.+.++..+.|+.++++++...- . --+||++||.++....
T Consensus 78 gcdgVfH~Asp~~~~~~---~--~e~~li~pav~Gt~nVL~ac~~~~---s--------VkrvV~TSS~aAv~~~~~~~~ 141 (327)
T KOG1502|consen 78 GCDGVFHTASPVDFDLE---D--PEKELIDPAVKGTKNVLEACKKTK---S--------VKRVVYTSSTAAVRYNGPNIG 141 (327)
T ss_pred CCCEEEEeCccCCCCCC---C--cHHhhhhHHHHHHHHHHHHHhccC---C--------cceEEEeccHHHhccCCcCCC
Confidence 48999999986553221 1 123688999999999999998553 0 1459999999887543
Q ss_pred ---------ccch--------hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCC--hHHHHHhhhhh
Q 025672 164 ---------WYQI--------HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA--PEEIRSKATDY 224 (249)
Q Consensus 164 ---------~~~~--------~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~--~~~~~~~~~~~ 224 (249)
+... .|+.||.--+..+.. ++.+.|+...+|+||.|-.|.....+. ..-..+.+...
T Consensus 142 ~~~vvdE~~wsd~~~~~~~~~~Y~~sK~lAEkaAw~----fa~e~~~~lv~inP~lV~GP~l~~~l~~s~~~~l~~i~G~ 217 (327)
T KOG1502|consen 142 ENSVVDEESWSDLDFCRCKKLWYALSKTLAEKAAWE----FAKENGLDLVTINPGLVFGPGLQPSLNSSLNALLKLIKGL 217 (327)
T ss_pred CCcccccccCCcHHHHHhhHHHHHHHHHHHHHHHHH----HHHhCCccEEEecCCceECCCcccccchhHHHHHHHHhcc
Confidence 2222 355665443333333 443558999999999998776666332 22223333221
Q ss_pred hc----c-cCCCCHHHHHHHHHHhccCC
Q 025672 225 MA----A-YKFGEKWDIAMAALYLASDA 247 (249)
Q Consensus 225 ~~----~-~~~~~~~dva~~v~~l~s~~ 247 (249)
.. . ..+.+.+|||.+-+++++..
T Consensus 218 ~~~~~n~~~~~VdVrDVA~AHv~a~E~~ 245 (327)
T KOG1502|consen 218 AETYPNFWLAFVDVRDVALAHVLALEKP 245 (327)
T ss_pred cccCCCCceeeEeHHHHHHHHHHHHcCc
Confidence 11 1 12578999999999998764
|
|
| >PLN02662 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.84 E-value=3.1e-19 Score=150.77 Aligned_cols=209 Identities=14% Similarity=0.077 Sum_probs=145.2
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHH--hcCCCeeEEEccCCCHHHHHHHHHHHHHHhC
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALH--SLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~--~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 88 (249)
++|++|||||+|+||++++++|+++|++|++++|+............ ....++.++++|++|+++++.+++
T Consensus 3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------- 75 (322)
T PLN02662 3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVD------- 75 (322)
T ss_pred CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHHc-------
Confidence 47899999999999999999999999999999988664333222111 112468899999999998887765
Q ss_pred CccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccc-c-cCc--
Q 025672 89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY-T-ATW-- 164 (249)
Q Consensus 89 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~-~-~~~-- 164 (249)
.+|+|||+|+..... . .+ .....+++|+.++.++++++.... + ..+||++||..+. + +.+
T Consensus 76 ~~d~Vih~A~~~~~~-~--~~--~~~~~~~~nv~gt~~ll~a~~~~~---~--------~~~~v~~SS~~~~~y~~~~~~ 139 (322)
T PLN02662 76 GCEGVFHTASPFYHD-V--TD--PQAELIDPAVKGTLNVLRSCAKVP---S--------VKRVVVTSSMAAVAYNGKPLT 139 (322)
T ss_pred CCCEEEEeCCcccCC-C--CC--hHHHHHHHHHHHHHHHHHHHHhCC---C--------CCEEEEccCHHHhcCCCcCCC
Confidence 489999999864211 0 11 124778999999999999886431 1 1569999997531 1 110
Q ss_pred ------------c------chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCC--CChHHHHHhhhhh
Q 025672 165 ------------Y------QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK--LAPEEIRSKATDY 224 (249)
Q Consensus 165 ------------~------~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~--~~~~~~~~~~~~~ 224 (249)
+ ...|+.+|...+.+++.+.++ +|++++.+.|+.+.++..... .......+.+...
T Consensus 140 ~~~~~~E~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~----~~~~~~~lRp~~v~Gp~~~~~~~~~~~~~~~~~~~~ 215 (322)
T PLN02662 140 PDVVVDETWFSDPAFCEESKLWYVLSKTLAEEAAWKFAKE----NGIDMVTINPAMVIGPLLQPTLNTSAEAILNLINGA 215 (322)
T ss_pred CCCcCCcccCCChhHhhcccchHHHHHHHHHHHHHHHHHH----cCCcEEEEeCCcccCCCCCCCCCchHHHHHHHhcCC
Confidence 1 136999999988888777654 479999999999997753321 1122222221111
Q ss_pred --hc--ccCCCCHHHHHHHHHHhccC
Q 025672 225 --MA--AYKFGEKWDIAMAALYLASD 246 (249)
Q Consensus 225 --~~--~~~~~~~~dva~~v~~l~s~ 246 (249)
.+ ...+...+|+|++++.++..
T Consensus 216 ~~~~~~~~~~i~v~Dva~a~~~~~~~ 241 (322)
T PLN02662 216 QTFPNASYRWVDVRDVANAHIQAFEI 241 (322)
T ss_pred ccCCCCCcCeEEHHHHHHHHHHHhcC
Confidence 11 23467899999999988864
|
|
| >TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.84 E-value=5.2e-19 Score=148.77 Aligned_cols=207 Identities=20% Similarity=0.139 Sum_probs=144.5
Q ss_pred EEEEecCCCchhHHHHHHHHHcC--CeEEEEeCCcc--hHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCC
Q 025672 14 VALLTGGGSGIGFEISLQLGKHG--AAIAIMGRRKT--VLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK 89 (249)
Q Consensus 14 ~~lItGa~~giG~~~a~~l~~~G--~~v~l~~r~~~--~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 89 (249)
+++||||+|+||.+++++|++.| ++|++++|... +.+.+ +.+.. ..++.++.+|++|++++.++++.. +
T Consensus 1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~-----~ 73 (317)
T TIGR01181 1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENL-ADLED-NPRYRFVKGDIGDRELVSRLFTEH-----Q 73 (317)
T ss_pred CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhh-hhhcc-CCCcEEEEcCCcCHHHHHHHHhhc-----C
Confidence 48999999999999999999987 68888876432 11111 12211 246788999999999999988753 5
Q ss_pred ccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc-------
Q 025672 90 LDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA------- 162 (249)
Q Consensus 90 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~------- 162 (249)
+|+|||+|+..... .+.+.++..+++|+.++.++++++...+.+ .++|++||...+..
T Consensus 74 ~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-----------~~~i~~Ss~~v~g~~~~~~~~ 138 (317)
T TIGR01181 74 PDAVVHFAAESHVD----RSISGPAAFIETNVVGTYTLLEAVRKYWHE-----------FRFHHISTDEVYGDLEKGDAF 138 (317)
T ss_pred CCEEEEcccccCch----hhhhCHHHHHHHHHHHHHHHHHHHHhcCCC-----------ceEEEeeccceeCCCCCCCCc
Confidence 99999999965421 234456778999999999999887654321 45999998543221
Q ss_pred -----CccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhh--hcc-------c
Q 025672 163 -----TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDY--MAA-------Y 228 (249)
Q Consensus 163 -----~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~--~~~-------~ 228 (249)
..+...|+.+|.+.+.+++.++.++ ++++..+.|+.+..+..........+....... ++. .
T Consensus 139 ~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~----~~~~~i~R~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 214 (317)
T TIGR01181 139 TETTPLAPSSPYSASKAASDHLVRAYHRTY----GLPALITRCSNNYGPYQFPEKLIPLMITNALAGKPLPVYGDGQQVR 214 (317)
T ss_pred CCCCCCCCCCchHHHHHHHHHHHHHHHHHh----CCCeEEEEeccccCCCCCcccHHHHHHHHHhcCCCceEeCCCceEE
Confidence 1234479999999999999988764 589999999999866433222222222222221 111 1
Q ss_pred CCCCHHHHHHHHHHhccC
Q 025672 229 KFGEKWDIAMAALYLASD 246 (249)
Q Consensus 229 ~~~~~~dva~~v~~l~s~ 246 (249)
-+...+|+++++..++.+
T Consensus 215 ~~i~v~D~a~~~~~~~~~ 232 (317)
T TIGR01181 215 DWLYVEDHCRAIYLVLEK 232 (317)
T ss_pred eeEEHHHHHHHHHHHHcC
Confidence 245689999999988864
|
This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor. |
| >TIGR01472 gmd GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.83 E-value=6.7e-19 Score=150.18 Aligned_cols=158 Identities=19% Similarity=0.125 Sum_probs=116.6
Q ss_pred cEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcch-----HHHHHHHHH-hcCCCeeEEEccCCCHHHHHHHHHHHHHH
Q 025672 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTV-----LRSAVAALH-SLGIPAIGLEGDVRKREDAVRVVESTINH 86 (249)
Q Consensus 13 k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~-----~~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 86 (249)
|++|||||+|+||++++++|+++|++|++++|+.+. ++.+.++.. ..+.++.++++|++|.+++.++++.+
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~--- 77 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEI--- 77 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhC---
Confidence 689999999999999999999999999999987642 222221111 11346889999999999999998864
Q ss_pred hCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc-----
Q 025672 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT----- 161 (249)
Q Consensus 87 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~----- 161 (249)
++|+|||+|+...... ..+.-...+++|+.++.++++++.+.-.++ ..++|++||...+.
T Consensus 78 --~~d~ViH~Aa~~~~~~----~~~~~~~~~~~n~~gt~~ll~a~~~~~~~~---------~~~~v~~SS~~vyg~~~~~ 142 (343)
T TIGR01472 78 --KPTEIYNLAAQSHVKV----SFEIPEYTADVDGIGTLRLLEAVRTLGLIK---------SVKFYQASTSELYGKVQEI 142 (343)
T ss_pred --CCCEEEECCcccccch----hhhChHHHHHHHHHHHHHHHHHHHHhCCCc---------CeeEEEeccHHhhCCCCCC
Confidence 5899999999754321 222235677899999999999987642111 13589999864332
Q ss_pred ------cCccchhhHHHHHHHHHHHHHHHHHhc
Q 025672 162 ------ATWYQIHVSAAKAAVDSITRSLALEWG 188 (249)
Q Consensus 162 ------~~~~~~~y~~sK~a~~~l~~~la~e~~ 188 (249)
+..+...|+.||.+.+.+++.++++++
T Consensus 143 ~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~ 175 (343)
T TIGR01472 143 PQNETTPFYPRSPYAAAKLYAHWITVNYREAYG 175 (343)
T ss_pred CCCCCCCCCCCChhHHHHHHHHHHHHHHHHHhC
Confidence 112456899999999999999987753
|
Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116). |
| >PLN02240 UDP-glucose 4-epimerase | Back alignment and domain information |
|---|
Probab=99.82 E-value=3.2e-18 Score=146.42 Aligned_cols=173 Identities=20% Similarity=0.157 Sum_probs=126.8
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHH----hcCCCeeEEEccCCCHHHHHHHHHHH
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALH----SLGIPAIGLEGDVRKREDAVRVVEST 83 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~----~~~~~~~~~~~Dl~~~~~~~~~~~~~ 83 (249)
|.+++|+++||||+|+||++++++|+++|++|++++|.........+.+. ..+.++.++.+|++|+++++.+++..
T Consensus 1 ~~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~ 80 (352)
T PLN02240 1 MSLMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFAST 80 (352)
T ss_pred CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhC
Confidence 45778999999999999999999999999999999875433222212221 12346889999999999999988753
Q ss_pred HHHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc--
Q 025672 84 INHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT-- 161 (249)
Q Consensus 84 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~-- 161 (249)
.+|+|||+|+..... .+.+++...+++|+.++.++++++.. .+. .++|++||...+.
T Consensus 81 -----~~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~--------~~~v~~Ss~~vyg~~ 139 (352)
T PLN02240 81 -----RFDAVIHFAGLKAVG----ESVAKPLLYYDNNLVGTINLLEVMAK----HGC--------KKLVFSSSATVYGQP 139 (352)
T ss_pred -----CCCEEEEccccCCcc----ccccCHHHHHHHHHHHHHHHHHHHHH----cCC--------CEEEEEccHHHhCCC
Confidence 699999999965321 13345678899999999999886542 221 5699999964331
Q ss_pred ---------cCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccc
Q 025672 162 ---------ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK 204 (249)
Q Consensus 162 ---------~~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~ 204 (249)
+..+...|+.+|.+.+.+.+.++.+ ..++.+..+.|+.+.
T Consensus 140 ~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~~~R~~~v~ 188 (352)
T PLN02240 140 EEVPCTEEFPLSATNPYGRTKLFIEEICRDIHAS---DPEWKIILLRYFNPV 188 (352)
T ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHh---cCCCCEEEEeecCcC
Confidence 1123568999999999999988765 235777777765554
|
|
| >PRK10084 dTDP-glucose 4,6 dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=5e-18 Score=145.23 Aligned_cols=215 Identities=17% Similarity=0.113 Sum_probs=143.9
Q ss_pred EEEEecCCCchhHHHHHHHHHcCCe-EEEEeCCc--chHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCc
Q 025672 14 VALLTGGGSGIGFEISLQLGKHGAA-IAIMGRRK--TVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (249)
Q Consensus 14 ~~lItGa~~giG~~~a~~l~~~G~~-v~l~~r~~--~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 90 (249)
++|||||+|+||++++++|+++|++ |+.+++.. ...+... .+. .+.++.++.+|++|.+++++++++. ++
T Consensus 2 kilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~ 74 (352)
T PRK10084 2 KILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLA-DVS-DSERYVFEHADICDRAELDRIFAQH-----QP 74 (352)
T ss_pred eEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHHH-hcc-cCCceEEEEecCCCHHHHHHHHHhc-----CC
Confidence 5899999999999999999999986 55555532 1222222 111 1346788999999999999988752 69
Q ss_pred cEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc---------
Q 025672 91 DILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT--------- 161 (249)
Q Consensus 91 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~--------- 161 (249)
|+|||+|+..... .+.+..+..+++|+.++.++++++.++|.+..... ....++|++||...+.
T Consensus 75 d~vih~A~~~~~~----~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~---~~~~~~i~~SS~~vyg~~~~~~~~~ 147 (352)
T PRK10084 75 DAVMHLAAESHVD----RSITGPAAFIETNIVGTYVLLEAARNYWSALDEDK---KNAFRFHHISTDEVYGDLPHPDEVE 147 (352)
T ss_pred CEEEECCcccCCc----chhcCchhhhhhhhHHHHHHHHHHHHhcccccccc---ccceeEEEecchhhcCCCCcccccc
Confidence 9999999965321 12233467899999999999999998764321100 0014799999864322
Q ss_pred ------------cCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhh--hhcc
Q 025672 162 ------------ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATD--YMAA 227 (249)
Q Consensus 162 ------------~~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~--~~~~ 227 (249)
+..+...|+.+|.+.+.+++.+++++ |+++..+.|+.+..+..........+...... ..+.
T Consensus 148 ~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~----g~~~vilr~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~ 223 (352)
T PRK10084 148 NSEELPLFTETTAYAPSSPYSASKASSDHLVRAWLRTY----GLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPI 223 (352)
T ss_pred ccccCCCccccCCCCCCChhHHHHHHHHHHHHHHHHHh----CCCEEEEeccceeCCCcCccchHHHHHHHHhcCCCeEE
Confidence 11234689999999999999988765 47777788888886643221111222222211 1121
Q ss_pred -------cCCCCHHHHHHHHHHhccC
Q 025672 228 -------YKFGEKWDIAMAALYLASD 246 (249)
Q Consensus 228 -------~~~~~~~dva~~v~~l~s~ 246 (249)
.-+...+|+++++..++..
T Consensus 224 ~~~g~~~~~~v~v~D~a~a~~~~l~~ 249 (352)
T PRK10084 224 YGKGDQIRDWLYVEDHARALYKVVTE 249 (352)
T ss_pred eCCCCeEEeeEEHHHHHHHHHHHHhc
Confidence 1256799999999888754
|
|
| >PLN02686 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.81 E-value=6.2e-18 Score=145.39 Aligned_cols=212 Identities=10% Similarity=0.035 Sum_probs=145.5
Q ss_pred CCCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhc------CCCeeEEEccCCCHHHHHHH
Q 025672 6 KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL------GIPAIGLEGDVRKREDAVRV 79 (249)
Q Consensus 6 ~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~------~~~~~~~~~Dl~~~~~~~~~ 79 (249)
.....++|++|||||+|+||++++++|+++|++|+++.|+.+..+.+. ++... +..+.++.+|++|.+++.++
T Consensus 47 ~~~~~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l~-~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~ 125 (367)
T PLN02686 47 AGADAEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKLR-EMEMFGEMGRSNDGIWTVMANLTEPESLHEA 125 (367)
T ss_pred cccCCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HHhhhccccccCCceEEEEcCCCCHHHHHHH
Confidence 345678999999999999999999999999999999888866555442 22211 13578899999999999888
Q ss_pred HHHHHHHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccc
Q 025672 80 VESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH 159 (249)
Q Consensus 80 ~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~ 159 (249)
++ .+|.+||.++......... ......++|+.+..++++++...- +. .++|++||..+
T Consensus 126 i~-------~~d~V~hlA~~~~~~~~~~----~~~~~~~~nv~gt~~llea~~~~~---~v--------~r~V~~SS~~~ 183 (367)
T PLN02686 126 FD-------GCAGVFHTSAFVDPAGLSG----YTKSMAELEAKASENVIEACVRTE---SV--------RKCVFTSSLLA 183 (367)
T ss_pred HH-------hccEEEecCeeeccccccc----ccchhhhhhHHHHHHHHHHHHhcC---Cc--------cEEEEeccHHH
Confidence 76 3689999988653322111 112345688999999988876321 11 45999998531
Q ss_pred -cc--------c--------------CccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHH
Q 025672 160 -YT--------A--------------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEE 216 (249)
Q Consensus 160 -~~--------~--------------~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~ 216 (249)
.+ + ..+...|+.+|.+.+.+++.++++ +|++++.+.|+.|.++...... +..
T Consensus 184 ~vyg~~~~~~~~~~i~E~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~----~gl~~v~lRp~~vyGp~~~~~~-~~~ 258 (367)
T PLN02686 184 CVWRQNYPHDLPPVIDEESWSDESFCRDNKLWYALGKLKAEKAAWRAARG----KGLKLATICPALVTGPGFFRRN-STA 258 (367)
T ss_pred hcccccCCCCCCcccCCCCCCChhhcccccchHHHHHHHHHHHHHHHHHh----cCceEEEEcCCceECCCCCCCC-Chh
Confidence 11 0 012346999999999999887764 4799999999999987533221 111
Q ss_pred HHHhhhhhhcc---c--CCCCHHHHHHHHHHhcc
Q 025672 217 IRSKATDYMAA---Y--KFGEKWDIAMAALYLAS 245 (249)
Q Consensus 217 ~~~~~~~~~~~---~--~~~~~~dva~~v~~l~s 245 (249)
.........+. + .+...+|++++++.++.
T Consensus 259 ~~~~~~g~~~~~g~g~~~~v~V~Dva~A~~~al~ 292 (367)
T PLN02686 259 TIAYLKGAQEMLADGLLATADVERLAEAHVCVYE 292 (367)
T ss_pred HHHHhcCCCccCCCCCcCeEEHHHHHHHHHHHHh
Confidence 22222111111 1 25679999999988875
|
|
| >PLN00141 Tic62-NAD(P)-related group II protein; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.2e-17 Score=136.37 Aligned_cols=199 Identities=16% Similarity=0.090 Sum_probs=131.3
Q ss_pred CCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCH-HHHHHHHHHHHHHh-
Q 025672 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKR-EDAVRVVESTINHF- 87 (249)
Q Consensus 10 l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~~- 87 (249)
.++++++||||+|+||+.++++|+++|++|+++.|+.++.+.... .+.++.++.+|++|. +++.. .+
T Consensus 15 ~~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~----~~~~~~~~~~Dl~d~~~~l~~-------~~~ 83 (251)
T PLN00141 15 VKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLP----QDPSLQIVRADVTEGSDKLVE-------AIG 83 (251)
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcc----cCCceEEEEeeCCCCHHHHHH-------Hhh
Confidence 567999999999999999999999999999999998765443221 134688999999984 33222 23
Q ss_pred CCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc---cCc
Q 025672 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT---ATW 164 (249)
Q Consensus 88 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~---~~~ 164 (249)
..+|+||+++|...... + ...+++|+.++.++++++. +.+ .++||++||...+. +.+
T Consensus 84 ~~~d~vi~~~g~~~~~~-----~---~~~~~~n~~~~~~ll~a~~----~~~--------~~~iV~iSS~~v~g~~~~~~ 143 (251)
T PLN00141 84 DDSDAVICATGFRRSFD-----P---FAPWKVDNFGTVNLVEACR----KAG--------VTRFILVSSILVNGAAMGQI 143 (251)
T ss_pred cCCCEEEECCCCCcCCC-----C---CCceeeehHHHHHHHHHHH----HcC--------CCEEEEEccccccCCCcccc
Confidence 36999999998642111 0 1224688889888888864 222 27899999986432 222
Q ss_pred cchhhHHHHHHHHHHHHHHHHH--hcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHH
Q 025672 165 YQIHVSAAKAAVDSITRSLALE--WGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALY 242 (249)
Q Consensus 165 ~~~~y~~sK~a~~~l~~~la~e--~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~ 242 (249)
....|...|.....+...+..| +. ..|++++.|.||++.+++....... .........+.+++|+|+.+..
T Consensus 144 ~~~~~~~~~~~~~~~~~k~~~e~~l~-~~gi~~~iirpg~~~~~~~~~~~~~------~~~~~~~~~~i~~~dvA~~~~~ 216 (251)
T PLN00141 144 LNPAYIFLNLFGLTLVAKLQAEKYIR-KSGINYTIVRPGGLTNDPPTGNIVM------EPEDTLYEGSISRDQVAEVAVE 216 (251)
T ss_pred cCcchhHHHHHHHHHHHHHHHHHHHH-hcCCcEEEEECCCccCCCCCceEEE------CCCCccccCcccHHHHHHHHHH
Confidence 3445666665444333333333 44 6799999999999976532211100 0000112236799999999999
Q ss_pred hccC
Q 025672 243 LASD 246 (249)
Q Consensus 243 l~s~ 246 (249)
++..
T Consensus 217 ~~~~ 220 (251)
T PLN00141 217 ALLC 220 (251)
T ss_pred HhcC
Confidence 9754
|
|
| >PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=2.2e-17 Score=141.08 Aligned_cols=211 Identities=15% Similarity=0.032 Sum_probs=145.3
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHh-----cCCCeeEEEccCCCHHHHHHHHHH
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHS-----LGIPAIGLEGDVRKREDAVRVVES 82 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~-----~~~~~~~~~~Dl~~~~~~~~~~~~ 82 (249)
.-+++|++|||||+|.||.+++++|+++|++|++++|...........+.. ...++.++.+|+.|.+++..+++
T Consensus 11 ~~~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~- 89 (348)
T PRK15181 11 LVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACK- 89 (348)
T ss_pred ccccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhh-
Confidence 346789999999999999999999999999999999865432222222211 11357899999999988887765
Q ss_pred HHHHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc
Q 025672 83 TINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 162 (249)
Q Consensus 83 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~ 162 (249)
.+|+|||.|+..... ...++....+++|+.|+.++++++... +. .++|++||...+..
T Consensus 90 ------~~d~ViHlAa~~~~~----~~~~~~~~~~~~Nv~gt~nll~~~~~~----~~--------~~~v~~SS~~vyg~ 147 (348)
T PRK15181 90 ------NVDYVLHQAALGSVP----RSLKDPIATNSANIDGFLNMLTAARDA----HV--------SSFTYAASSSTYGD 147 (348)
T ss_pred ------CCCEEEECccccCch----hhhhCHHHHHHHHHHHHHHHHHHHHHc----CC--------CeEEEeechHhhCC
Confidence 489999999964321 122334567899999999999887532 21 46999998743321
Q ss_pred C-----------ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCC----CChHHHHHhhhhh--h
Q 025672 163 T-----------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK----LAPEEIRSKATDY--M 225 (249)
Q Consensus 163 ~-----------~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~----~~~~~~~~~~~~~--~ 225 (249)
. .+...|+.+|.+.+.+.+.++.+ +|+++..+.|+.+..+..... ...+.+....... +
T Consensus 148 ~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~----~~~~~~~lR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~~~i 223 (348)
T PRK15181 148 HPDLPKIEERIGRPLSPYAVTKYVNELYADVFARS----YEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPI 223 (348)
T ss_pred CCCCCCCCCCCCCCCChhhHHHHHHHHHHHHHHHH----hCCCEEEEEecceeCcCCCCCCccccCHHHHHHHHHcCCCc
Confidence 1 13457999999999998887654 369999999999987643221 1122333322211 1
Q ss_pred cc-------cCCCCHHHHHHHHHHhcc
Q 025672 226 AA-------YKFGEKWDIAMAALYLAS 245 (249)
Q Consensus 226 ~~-------~~~~~~~dva~~v~~l~s 245 (249)
.. +-+...+|++++++.++.
T Consensus 224 ~~~g~g~~~rd~i~v~D~a~a~~~~~~ 250 (348)
T PRK15181 224 YINGDGSTSRDFCYIENVIQANLLSAT 250 (348)
T ss_pred EEeCCCCceEeeEEHHHHHHHHHHHHh
Confidence 11 124568999999887663
|
|
| >COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.78 E-value=4.9e-17 Score=141.08 Aligned_cols=173 Identities=24% Similarity=0.281 Sum_probs=145.8
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhc--CCCeeEEEccCCCHHHHHHHHHHHHH
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVESTIN 85 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~ 85 (249)
.++||++|||||+|.||+++++++++.+. ++++.+|++.++.....+++.. ..++.++-+|+.|.+.++++++..
T Consensus 247 ~~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~-- 324 (588)
T COG1086 247 MLTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGH-- 324 (588)
T ss_pred HcCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhcC--
Confidence 47899999999999999999999999987 6999999999999999999764 467889999999999999999865
Q ss_pred HhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCcc
Q 025672 86 HFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY 165 (249)
Q Consensus 86 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~ 165 (249)
++|+|+|+|+.-+. |+-+.. ..+.+++|++|+.++++++...-. -++|.+|+--+..|
T Consensus 325 ---kvd~VfHAAA~KHV-Pl~E~n---P~Eai~tNV~GT~nv~~aa~~~~V------------~~~V~iSTDKAV~P--- 382 (588)
T COG1086 325 ---KVDIVFHAAALKHV-PLVEYN---PEEAIKTNVLGTENVAEAAIKNGV------------KKFVLISTDKAVNP--- 382 (588)
T ss_pred ---CCceEEEhhhhccC-cchhcC---HHHHHHHhhHhHHHHHHHHHHhCC------------CEEEEEecCcccCC---
Confidence 69999999986442 333333 467789999999999999986643 33999999877655
Q ss_pred chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccc
Q 025672 166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDT 206 (249)
Q Consensus 166 ~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~ 206 (249)
-..|+++|...+.++.+++.+.. ..+-++.+|.-|.|...
T Consensus 383 tNvmGaTKr~aE~~~~a~~~~~~-~~~T~f~~VRFGNVlGS 422 (588)
T COG1086 383 TNVMGATKRLAEKLFQAANRNVS-GTGTRFCVVRFGNVLGS 422 (588)
T ss_pred chHhhHHHHHHHHHHHHHhhccC-CCCcEEEEEEecceecC
Confidence 45799999999999999998765 44799999999999753
|
|
| >TIGR03466 HpnA hopanoid-associated sugar epimerase | Back alignment and domain information |
|---|
Probab=99.78 E-value=2.7e-17 Score=139.09 Aligned_cols=199 Identities=18% Similarity=0.144 Sum_probs=140.7
Q ss_pred cEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCccE
Q 025672 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI 92 (249)
Q Consensus 13 k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ 92 (249)
++++||||+|+||+.+++.|+++|++|++++|+.+..... . ...+.++.+|++|.++++++++ .+|+
T Consensus 1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~--~~~~~~~~~D~~~~~~l~~~~~-------~~d~ 67 (328)
T TIGR03466 1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNL----E--GLDVEIVEGDLRDPASLRKAVA-------GCRA 67 (328)
T ss_pred CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCcccccc----c--cCCceEEEeeCCCHHHHHHHHh-------CCCE
Confidence 3689999999999999999999999999999987643221 1 2357899999999998888765 5899
Q ss_pred EEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCc--------
Q 025672 93 LVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW-------- 164 (249)
Q Consensus 93 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~-------- 164 (249)
|||+++.... ..++.+..+++|+.++.++++++... . .+++|++||...+...+
T Consensus 68 vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~----~--------~~~~v~~SS~~~~~~~~~~~~~~e~ 129 (328)
T TIGR03466 68 LFHVAADYRL------WAPDPEEMYAANVEGTRNLLRAALEA----G--------VERVVYTSSVATLGVRGDGTPADET 129 (328)
T ss_pred EEEeceeccc------CCCCHHHHHHHHHHHHHHHHHHHHHh----C--------CCeEEEEechhhcCcCCCCCCcCcc
Confidence 9999975321 12235678899999999999887642 1 15699999975543210
Q ss_pred -------cchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHH-HHhhhhhhcc-----cCCC
Q 025672 165 -------YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEI-RSKATDYMAA-----YKFG 231 (249)
Q Consensus 165 -------~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~-~~~~~~~~~~-----~~~~ 231 (249)
....|+.+|.+.+.+++.++.+ .|+++..+.|+.+..+........... ........+. ..+.
T Consensus 130 ~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~----~~~~~~ilR~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 205 (328)
T TIGR03466 130 TPSSLDDMIGHYKRSKFLAEQAALEMAAE----KGLPVVIVNPSTPIGPRDIKPTPTGRIIVDFLNGKMPAYVDTGLNLV 205 (328)
T ss_pred CCCCcccccChHHHHHHHHHHHHHHHHHh----cCCCEEEEeCCccCCCCCCCCCcHHHHHHHHHcCCCceeeCCCcceE
Confidence 1347999999999999888754 369999999999986543222111112 1111112221 1245
Q ss_pred CHHHHHHHHHHhccC
Q 025672 232 EKWDIAMAALYLASD 246 (249)
Q Consensus 232 ~~~dva~~v~~l~s~ 246 (249)
..+|+++++..++..
T Consensus 206 ~v~D~a~a~~~~~~~ 220 (328)
T TIGR03466 206 HVDDVAEGHLLALER 220 (328)
T ss_pred EHHHHHHHHHHHHhC
Confidence 799999998877653
|
The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. |
| >PRK10675 UDP-galactose-4-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=7.4e-17 Score=137.22 Aligned_cols=168 Identities=18% Similarity=0.125 Sum_probs=121.6
Q ss_pred EEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHh-cCCCeeEEEccCCCHHHHHHHHHHHHHHhCCccE
Q 025672 14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHS-LGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI 92 (249)
Q Consensus 14 ~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ 92 (249)
++|||||+|+||++++++|+++|++|++++|..+........+.. .+.++.++.+|++|.++++.+++. .++|+
T Consensus 2 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~~~d~ 76 (338)
T PRK10675 2 RVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHD-----HAIDT 76 (338)
T ss_pred eEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhc-----CCCCE
Confidence 589999999999999999999999999988754433332222222 234577889999999998888763 36999
Q ss_pred EEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC---------
Q 025672 93 LVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT--------- 163 (249)
Q Consensus 93 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~--------- 163 (249)
|||+|+...... ..+.....+++|+.++.++++++. +.+. .+||++||...+...
T Consensus 77 vvh~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~--------~~~v~~Ss~~~yg~~~~~~~~E~~ 140 (338)
T PRK10675 77 VIHFAGLKAVGE----SVQKPLEYYDNNVNGTLRLISAMR----AANV--------KNLIFSSSATVYGDQPKIPYVESF 140 (338)
T ss_pred EEECCccccccc----hhhCHHHHHHHHHHHHHHHHHHHH----HcCC--------CEEEEeccHHhhCCCCCCcccccc
Confidence 999998754221 123345678999999999987654 2221 569999996533210
Q ss_pred ---ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccc
Q 025672 164 ---WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKD 205 (249)
Q Consensus 164 ---~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t 205 (249)
.+...|+.+|.+.+.+++.++++. .++++..+.|+.+..
T Consensus 141 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~ilR~~~v~g 182 (338)
T PRK10675 141 PTGTPQSPYGKSKLMVEQILTDLQKAQ---PDWSIALLRYFNPVG 182 (338)
T ss_pred CCCCCCChhHHHHHHHHHHHHHHHHhc---CCCcEEEEEeeeecC
Confidence 235789999999999999987653 257777777655543
|
|
| >COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.76 E-value=6.2e-17 Score=129.86 Aligned_cols=208 Identities=19% Similarity=0.095 Sum_probs=151.4
Q ss_pred cEEEEecCCCchhHHHHHHHHHcCC--eEEEEeCCc--chHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhC
Q 025672 13 KVALLTGGGSGIGFEISLQLGKHGA--AIAIMGRRK--TVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (249)
Q Consensus 13 k~~lItGa~~giG~~~a~~l~~~G~--~v~l~~r~~--~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 88 (249)
+++|||||.|+||..+++.++.+.. +|+.+|.=. .+.+.++.-. ..++..|++.|+.|.+.+.+++++-
T Consensus 1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~--~~~~~~fv~~DI~D~~~v~~~~~~~----- 73 (340)
T COG1088 1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVE--DSPRYRFVQGDICDRELVDRLFKEY----- 73 (340)
T ss_pred CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhh--cCCCceEEeccccCHHHHHHHHHhc-----
Confidence 4689999999999999999998865 467776521 2223332222 2458999999999999999999864
Q ss_pred CccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccc---------
Q 025672 89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH--------- 159 (249)
Q Consensus 89 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~--------- 159 (249)
.+|+|+|-|+-.+. +.+..+-...+++|++|+++|++++..+..+ -+++.||.-.-
T Consensus 74 ~~D~VvhfAAESHV----DRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~-----------frf~HISTDEVYG~l~~~~~ 138 (340)
T COG1088 74 QPDAVVHFAAESHV----DRSIDGPAPFIQTNVVGTYTLLEAARKYWGK-----------FRFHHISTDEVYGDLGLDDD 138 (340)
T ss_pred CCCeEEEechhccc----cccccChhhhhhcchHHHHHHHHHHHHhccc-----------ceEEEeccccccccccCCCC
Confidence 69999999986663 2344555777999999999999999988643 24777776321
Q ss_pred ----cccCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHh-hh-hhhcc------
Q 025672 160 ----YTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSK-AT-DYMAA------ 227 (249)
Q Consensus 160 ----~~~~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~-~~-~~~~~------ 227 (249)
..+..+.++|++||++.+.|+|++.+.| |+.+....|..-..|..+.....+.+... +. ...|.
T Consensus 139 ~FtE~tp~~PsSPYSASKAasD~lVray~~TY----glp~~ItrcSNNYGPyqfpEKlIP~~I~nal~g~~lpvYGdG~~ 214 (340)
T COG1088 139 AFTETTPYNPSSPYSASKAASDLLVRAYVRTY----GLPATITRCSNNYGPYQFPEKLIPLMIINALLGKPLPVYGDGLQ 214 (340)
T ss_pred CcccCCCCCCCCCcchhhhhHHHHHHHHHHHc----CCceEEecCCCCcCCCcCchhhhHHHHHHHHcCCCCceecCCcc
Confidence 2344677899999999999999999866 59999999988887765554433333322 22 22232
Q ss_pred -cCCCCHHHHHHHHHHhccC
Q 025672 228 -YKFGEKWDIAMAALYLASD 246 (249)
Q Consensus 228 -~~~~~~~dva~~v~~l~s~ 246 (249)
+-|...+|-++++..++..
T Consensus 215 iRDWl~VeDh~~ai~~Vl~k 234 (340)
T COG1088 215 IRDWLYVEDHCRAIDLVLTK 234 (340)
T ss_pred eeeeEEeHhHHHHHHHHHhc
Confidence 3356788999999887753
|
|
| >PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.5e-17 Score=135.73 Aligned_cols=202 Identities=19% Similarity=0.168 Sum_probs=142.8
Q ss_pred EEEecCCCchhHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhc--CCCee----EEEccCCCHHHHHHHHHHHHHHh
Q 025672 15 ALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSL--GIPAI----GLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 15 ~lItGa~~giG~~~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~--~~~~~----~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
+|||||+|.||++++++|++.+. +++++++++..+-.+..++... +.++. .+.+|++|.+.++.++++.
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~---- 76 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEY---- 76 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT------
T ss_pred CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhc----
Confidence 69999999999999999999986 7999999999999999888532 23343 4588999999999998764
Q ss_pred CCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch
Q 025672 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 167 (249)
Q Consensus 88 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~ 167 (249)
++|+|+|.|+.-+..- .+. ...+.+++|+.|+.++++++..+-. -++|++|+--+..| ..
T Consensus 77 -~pdiVfHaAA~KhVpl-~E~---~p~eav~tNv~GT~nv~~aa~~~~v------------~~~v~ISTDKAv~P---tn 136 (293)
T PF02719_consen 77 -KPDIVFHAAALKHVPL-MED---NPFEAVKTNVLGTQNVAEAAIEHGV------------ERFVFISTDKAVNP---TN 136 (293)
T ss_dssp -T-SEEEE------HHH-HCC---CHHHHHHHHCHHHHHHHHHHHHTT-------------SEEEEEEECGCSS-----S
T ss_pred -CCCEEEEChhcCCCCh-HHh---CHHHHHHHHHHHHHHHHHHHHHcCC------------CEEEEccccccCCC---Cc
Confidence 7999999999654322 222 3467799999999999999986532 45999999776654 56
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcc--------cCCCCHHHHHHH
Q 025672 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAA--------YKFGEKWDIAMA 239 (249)
Q Consensus 168 ~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~dva~~ 239 (249)
.|++||.-.+.++...+...+ +.+.++.+|.-|.|-.. ...-.+-+.+.+.+.-|+ +.+.+++|.++.
T Consensus 137 vmGatKrlaE~l~~~~~~~~~-~~~t~f~~VRFGNVlgS---~GSVip~F~~Qi~~g~PlTvT~p~mtRffmti~EAv~L 212 (293)
T PF02719_consen 137 VMGATKRLAEKLVQAANQYSG-NSDTKFSSVRFGNVLGS---RGSVIPLFKKQIKNGGPLTVTDPDMTRFFMTIEEAVQL 212 (293)
T ss_dssp HHHHHHHHHHHHHHHHCCTSS-SS--EEEEEEE-EETTG---TTSCHHHHHHHHHTTSSEEECETT-EEEEE-HHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhhCC-CCCcEEEEEEecceecC---CCcHHHHHHHHHHcCCcceeCCCCcEEEEecHHHHHHH
Confidence 799999999999999998765 66899999999999742 222334555555555442 345688999988
Q ss_pred HHHhc
Q 025672 240 ALYLA 244 (249)
Q Consensus 240 v~~l~ 244 (249)
++..+
T Consensus 213 vl~a~ 217 (293)
T PF02719_consen 213 VLQAA 217 (293)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 87654
|
The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A. |
| >PLN02427 UDP-apiose/xylose synthase | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.7e-16 Score=137.47 Aligned_cols=211 Identities=10% Similarity=0.013 Sum_probs=141.3
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHc-CCeEEEEeCCcchHHHHHHHHH-hcCCCeeEEEccCCCHHHHHHHHHHHHH
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKH-GAAIAIMGRRKTVLRSAVAALH-SLGIPAIGLEGDVRKREDAVRVVESTIN 85 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~-G~~v~l~~r~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 85 (249)
..++.+++|||||+|.||++++++|+++ |++|++++|+.+..+.+..... ....++.++.+|++|.+.++++++
T Consensus 10 ~~~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~---- 85 (386)
T PLN02427 10 KPIKPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIK---- 85 (386)
T ss_pred CcccCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCChHHHHHHhh----
Confidence 3456778999999999999999999998 5899999987654433221100 112368999999999999887765
Q ss_pred HhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC--
Q 025672 86 HFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT-- 163 (249)
Q Consensus 86 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~-- 163 (249)
.+|+|||+|+........ .+ -...+..|+.+..++++++... +.++|++||...+...
T Consensus 86 ---~~d~ViHlAa~~~~~~~~-~~---~~~~~~~n~~gt~~ll~aa~~~-------------~~r~v~~SS~~vYg~~~~ 145 (386)
T PLN02427 86 ---MADLTINLAAICTPADYN-TR---PLDTIYSNFIDALPVVKYCSEN-------------NKRLIHFSTCEVYGKTIG 145 (386)
T ss_pred ---cCCEEEEcccccChhhhh-hC---hHHHHHHHHHHHHHHHHHHHhc-------------CCEEEEEeeeeeeCCCcC
Confidence 379999999965322111 11 2344668999999998877532 1459999986432210
Q ss_pred -------------------------------ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCC-
Q 025672 164 -------------------------------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK- 211 (249)
Q Consensus 164 -------------------------------~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~- 211 (249)
.+...|+.+|.+.+.+++.+++ .+|+++..+.|+.|..+.....
T Consensus 146 ~~~~e~~p~~~~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~g~~~~ilR~~~vyGp~~~~~~ 221 (386)
T PLN02427 146 SFLPKDHPLRQDPAFYVLKEDESPCIFGSIEKQRWSYACAKQLIERLIYAEGA----ENGLEFTIVRPFNWIGPRMDFIP 221 (386)
T ss_pred CCCCcccccccccccccccccccccccCCCCccccchHHHHHHHHHHHHHHHh----hcCCceEEecccceeCCCCCccc
Confidence 0123699999999999877654 4579999999999997643210
Q ss_pred ------CChHHH----HHhhhhhhc---------ccCCCCHHHHHHHHHHhccC
Q 025672 212 ------LAPEEI----RSKATDYMA---------AYKFGEKWDIAMAALYLASD 246 (249)
Q Consensus 212 ------~~~~~~----~~~~~~~~~---------~~~~~~~~dva~~v~~l~s~ 246 (249)
.....+ ...+....+ .+-+...+|++++++.+++.
T Consensus 222 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~g~g~~~r~~i~V~Dva~ai~~al~~ 275 (386)
T PLN02427 222 GIDGPSEGVPRVLACFSNNLLRREPLKLVDGGQSQRTFVYIKDAIEAVLLMIEN 275 (386)
T ss_pred cccccccccchHHHHHHHHHhcCCCeEEECCCCceECcEeHHHHHHHHHHHHhC
Confidence 000111 122211111 11356799999999988764
|
|
| >TIGR01179 galE UDP-glucose-4-epimerase | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.3e-16 Score=134.65 Aligned_cols=168 Identities=19% Similarity=0.109 Sum_probs=124.3
Q ss_pred EEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCccEE
Q 025672 14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDIL 93 (249)
Q Consensus 14 ~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~v 93 (249)
++|||||+|+||+.++++|.++|++|++++|...........+...+ ++.++.+|+++.++++++++. .++|+|
T Consensus 1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~-----~~~d~v 74 (328)
T TIGR01179 1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGERIT-RVTFVEGDLRDRELLDRLFEE-----HKIDAV 74 (328)
T ss_pred CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhcccc-ceEEEECCCCCHHHHHHHHHh-----CCCcEE
Confidence 47999999999999999999999999988765433222222222212 577899999999999988874 479999
Q ss_pred EEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC----------
Q 025672 94 VNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT---------- 163 (249)
Q Consensus 94 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~---------- 163 (249)
||+||.....+ ..++....++.|+.++..+++++.. .+. .++|++||...+...
T Consensus 75 v~~ag~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~--------~~~v~~ss~~~~g~~~~~~~~e~~~ 138 (328)
T TIGR01179 75 IHFAGLIAVGE----SVQDPLKYYRNNVVNTLNLLEAMQQ----TGV--------KKFIFSSSAAVYGEPSSIPISEDSP 138 (328)
T ss_pred EECccccCcch----hhcCchhhhhhhHHHHHHHHHHHHh----cCC--------CEEEEecchhhcCCCCCCCccccCC
Confidence 99999753221 2234456788999999999887643 221 569999886443211
Q ss_pred -ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccc
Q 025672 164 -WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDT 206 (249)
Q Consensus 164 -~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~ 206 (249)
.+...|+.+|++.+.+++.++++. .++++..+.|+.+..+
T Consensus 139 ~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~ilR~~~v~g~ 179 (328)
T TIGR01179 139 LGPINPYGRSKLMSERILRDLSKAD---PGLSYVILRYFNVAGA 179 (328)
T ss_pred CCCCCchHHHHHHHHHHHHHHHHhc---cCCCEEEEecCcccCC
Confidence 134679999999999999998652 4799999999888765
|
This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately. |
| >PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.9e-16 Score=127.65 Aligned_cols=203 Identities=20% Similarity=0.162 Sum_probs=149.2
Q ss_pred EEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCccEEE
Q 025672 15 ALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILV 94 (249)
Q Consensus 15 ~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi 94 (249)
||||||+|.||.+++++|.++|+.|+.+.|+.........+. ++.++.+|+.|.+.++.+++.. .+|.||
T Consensus 1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~-----~~~~~~~dl~~~~~~~~~~~~~-----~~d~vi 70 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKKL-----NVEFVIGDLTDKEQLEKLLEKA-----NIDVVI 70 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHHT-----TEEEEESETTSHHHHHHHHHHH-----TESEEE
T ss_pred EEEEccCCHHHHHHHHHHHHcCCccccccccccccccccccc-----eEEEEEeecccccccccccccc-----CceEEE
Confidence 699999999999999999999999888887766544333222 7899999999999999999876 799999
Q ss_pred EcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC-----------
Q 025672 95 NAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT----------- 163 (249)
Q Consensus 95 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~----------- 163 (249)
|+|+.... ..+.+.....++.|+.+..++++++...-. .++|++||...+...
T Consensus 71 ~~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~------------~~~i~~sS~~~y~~~~~~~~~e~~~~ 134 (236)
T PF01370_consen 71 HLAAFSSN----PESFEDPEEIIEANVQGTRNLLEAAREAGV------------KRFIFLSSASVYGDPDGEPIDEDSPI 134 (236)
T ss_dssp EEBSSSSH----HHHHHSHHHHHHHHHHHHHHHHHHHHHHTT------------SEEEEEEEGGGGTSSSSSSBETTSGC
T ss_pred Eeeccccc----cccccccccccccccccccccccccccccc------------cccccccccccccccccccccccccc
Confidence 99996431 112345678888999999998888874421 469999996443222
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccccc---ccCCCChHHHHHhhhhhhc--c-------cCCC
Q 025672 164 WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTA---GVSKLAPEEIRSKATDYMA--A-------YKFG 231 (249)
Q Consensus 164 ~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~---~~~~~~~~~~~~~~~~~~~--~-------~~~~ 231 (249)
.+...|+.+|...+.+.+.+.++. ++++..+.|+.+..+. .........+........+ . ..+.
T Consensus 135 ~~~~~Y~~~K~~~e~~~~~~~~~~----~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 210 (236)
T PF01370_consen 135 NPLSPYGASKRAAEELLRDYAKKY----GLRVTILRPPNVYGPGNPNNNSSSFLPSLIRQALKGKPIKIPGDGSQVRDFI 210 (236)
T ss_dssp CHSSHHHHHHHHHHHHHHHHHHHH----TSEEEEEEESEEESTTSSSSSTSSHHHHHHHHHHTTSSEEEESTSSCEEEEE
T ss_pred cccccccccccccccccccccccc----ccccccccccccccccccccccccccchhhHHhhcCCcccccCCCCCccceE
Confidence 234569999999999999988764 6999999999999776 1222222344443333221 1 1235
Q ss_pred CHHHHHHHHHHhccCC
Q 025672 232 EKWDIAMAALYLASDA 247 (249)
Q Consensus 232 ~~~dva~~v~~l~s~~ 247 (249)
..+|++++++++++..
T Consensus 211 ~v~D~a~~~~~~~~~~ 226 (236)
T PF01370_consen 211 HVDDLAEAIVAALENP 226 (236)
T ss_dssp EHHHHHHHHHHHHHHS
T ss_pred EHHHHHHHHHHHHhCC
Confidence 6899999999988643
|
The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B .... |
| >TIGR01746 Thioester-redct thioester reductase domain | Back alignment and domain information |
|---|
Probab=99.74 E-value=3.4e-16 Score=134.11 Aligned_cols=202 Identities=17% Similarity=0.113 Sum_probs=135.8
Q ss_pred EEEEecCCCchhHHHHHHHHHcC--CeEEEEeCCcchH---HHHHHHHHhcC--------CCeeEEEccCCCHH------
Q 025672 14 VALLTGGGSGIGFEISLQLGKHG--AAIAIMGRRKTVL---RSAVAALHSLG--------IPAIGLEGDVRKRE------ 74 (249)
Q Consensus 14 ~~lItGa~~giG~~~a~~l~~~G--~~v~l~~r~~~~~---~~~~~~~~~~~--------~~~~~~~~Dl~~~~------ 74 (249)
+++||||+|+||++++++|+++| ++|+++.|+.+.. +++.+.+.... .++.++.+|++++.
T Consensus 1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~ 80 (367)
T TIGR01746 1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA 80 (367)
T ss_pred CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence 58999999999999999999999 6799999986632 23333332211 47899999998753
Q ss_pred HHHHHHHHHHHHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEe
Q 025672 75 DAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINI 154 (249)
Q Consensus 75 ~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~i 154 (249)
....+. ..+|+|||||+..... ..+....++|+.++.++++.+... . ..+++++
T Consensus 81 ~~~~~~-------~~~d~vih~a~~~~~~-------~~~~~~~~~nv~g~~~ll~~a~~~----~--------~~~~v~i 134 (367)
T TIGR01746 81 EWERLA-------ENVDTIVHNGALVNWV-------YPYSELRAANVLGTREVLRLAASG----R--------AKPLHYV 134 (367)
T ss_pred HHHHHH-------hhCCEEEeCCcEeccC-------CcHHHHhhhhhHHHHHHHHHHhhC----C--------CceEEEE
Confidence 332222 4699999999964321 234667789999999998877532 1 1449999
Q ss_pred ccccccccC----------------ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHH
Q 025672 155 SATLHYTAT----------------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIR 218 (249)
Q Consensus 155 ss~~~~~~~----------------~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~ 218 (249)
||....... .....|+.+|.+.+.+++.++ +.|++++.+.||.+.++.........++.
T Consensus 135 SS~~v~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-----~~g~~~~i~Rpg~v~G~~~~g~~~~~~~~ 209 (367)
T TIGR01746 135 STISVLAAIDLSTVTEDDAIVTPPPGLAGGYAQSKWVAELLVREAS-----DRGLPVTIVRPGRILGNSYTGAINSSDIL 209 (367)
T ss_pred ccccccCCcCCCCccccccccccccccCCChHHHHHHHHHHHHHHH-----hcCCCEEEECCCceeecCCCCCCCchhHH
Confidence 998655331 112469999999998887654 33899999999999865322222222221
Q ss_pred H-hhh-----hhhcc-----cCCCCHHHHHHHHHHhccC
Q 025672 219 S-KAT-----DYMAA-----YKFGEKWDIAMAALYLASD 246 (249)
Q Consensus 219 ~-~~~-----~~~~~-----~~~~~~~dva~~v~~l~s~ 246 (249)
. .+. ...|. .-+...+|+++++++++..
T Consensus 210 ~~~~~~~~~~~~~p~~~~~~~~~~~vddva~ai~~~~~~ 248 (367)
T TIGR01746 210 WRMVKGCLALGAYPDSPELTEDLTPVDYVARAIVALSSQ 248 (367)
T ss_pred HHHHHHHHHhCCCCCCCccccCcccHHHHHHHHHHHHhC
Confidence 1 111 11221 1156789999999998754
|
It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold. |
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=99.71 E-value=1.2e-15 Score=140.87 Aligned_cols=212 Identities=13% Similarity=0.053 Sum_probs=144.1
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHc--CCeEEEEeCCc--chHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHH
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKH--GAAIAIMGRRK--TVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTI 84 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~--G~~v~l~~r~~--~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 84 (249)
.+++|+||||||+|.||++++++|+++ |++|+.++|.. .....+... ....++.++.+|++|.+.++.++..
T Consensus 3 ~~~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~~--~~~~~v~~~~~Dl~d~~~~~~~~~~-- 78 (668)
T PLN02260 3 TYEPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNPS--KSSPNFKFVKGDIASADLVNYLLIT-- 78 (668)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhhc--ccCCCeEEEECCCCChHHHHHHHhh--
Confidence 356799999999999999999999998 57888888742 222222111 1134688999999999888776542
Q ss_pred HHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc--
Q 025672 85 NHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA-- 162 (249)
Q Consensus 85 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~-- 162 (249)
..+|+|||+|+..... ....+....+++|+.++.++++++...- . -.++|++||...+..
T Consensus 79 ---~~~D~ViHlAa~~~~~----~~~~~~~~~~~~Nv~gt~~ll~a~~~~~---~--------vkr~I~~SS~~vyg~~~ 140 (668)
T PLN02260 79 ---EGIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKVTG---Q--------IRRFIHVSTDEVYGETD 140 (668)
T ss_pred ---cCCCEEEECCCccCch----hhhhCHHHHHHHHHHHHHHHHHHHHhcC---C--------CcEEEEEcchHHhCCCc
Confidence 3699999999975422 1122335677899999999988875321 1 156999999643321
Q ss_pred ------------CccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhh--hcc-
Q 025672 163 ------------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDY--MAA- 227 (249)
Q Consensus 163 ------------~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~--~~~- 227 (249)
..+...|+.+|.+.+.+++.+..++ ++++..+.|+.|..+..........+....... ++.
T Consensus 141 ~~~~~~~~E~~~~~p~~~Y~~sK~~aE~~v~~~~~~~----~l~~vilR~~~VyGp~~~~~~~i~~~~~~a~~g~~i~i~ 216 (668)
T PLN02260 141 EDADVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY----GLPVITTRGNNVYGPNQFPEKLIPKFILLAMQGKPLPIH 216 (668)
T ss_pred cccccCccccCCCCCCCCcHHHHHHHHHHHHHHHHHc----CCCEEEECcccccCcCCCcccHHHHHHHHHhCCCCeEEe
Confidence 1134579999999999998877653 689999999999876543221122222222211 111
Q ss_pred ------cCCCCHHHHHHHHHHhccC
Q 025672 228 ------YKFGEKWDIAMAALYLASD 246 (249)
Q Consensus 228 ------~~~~~~~dva~~v~~l~s~ 246 (249)
.-+...+|+++++..++..
T Consensus 217 g~g~~~r~~ihV~Dva~a~~~~l~~ 241 (668)
T PLN02260 217 GDGSNVRSYLYCEDVAEAFEVVLHK 241 (668)
T ss_pred cCCCceEeeEEHHHHHHHHHHHHhc
Confidence 1246799999999988753
|
|
| >PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones | Back alignment and domain information |
|---|
Probab=99.71 E-value=6.7e-16 Score=127.80 Aligned_cols=199 Identities=17% Similarity=0.124 Sum_probs=138.1
Q ss_pred EEecCCCchhHHHHHHHHHcC--CeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCccEE
Q 025672 16 LLTGGGSGIGFEISLQLGKHG--AAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDIL 93 (249)
Q Consensus 16 lItGa~~giG~~~a~~l~~~G--~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~v 93 (249)
|||||+|.||++++++|+++| ++|.+++++..... ...+... ....++++|++|++++.++++ ..|+|
T Consensus 1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~--~~~~~~~-~~~~~~~~Di~d~~~l~~a~~-------g~d~V 70 (280)
T PF01073_consen 1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKF--LKDLQKS-GVKEYIQGDITDPESLEEALE-------GVDVV 70 (280)
T ss_pred CEEcCCcHHHHHHHHHHHHCCCceEEEEccccccccc--chhhhcc-cceeEEEeccccHHHHHHHhc-------CCceE
Confidence 699999999999999999999 68988888765322 1122111 223499999999999999887 57999
Q ss_pred EEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc---C-------
Q 025672 94 VNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA---T------- 163 (249)
Q Consensus 94 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~---~------- 163 (249)
||+|+...... ....+..+++|+.|+-++++++... +- .++|++||.....+ .
T Consensus 71 ~H~Aa~~~~~~-----~~~~~~~~~vNV~GT~nvl~aa~~~----~V--------krlVytSS~~vv~~~~~~~~~~~~d 133 (280)
T PF01073_consen 71 FHTAAPVPPWG-----DYPPEEYYKVNVDGTRNVLEAARKA----GV--------KRLVYTSSISVVFDNYKGDPIINGD 133 (280)
T ss_pred EEeCccccccC-----cccHHHHHHHHHHHHHHHHHHHHHc----CC--------CEEEEEcCcceeEeccCCCCcccCC
Confidence 99999754322 2345778999999999999988743 21 56999999876543 1
Q ss_pred -------ccchhhHHHHHHHHHHHHHHHH-HhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhh---hhcc-----
Q 025672 164 -------WYQIHVSAAKAAVDSITRSLAL-EWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATD---YMAA----- 227 (249)
Q Consensus 164 -------~~~~~y~~sK~a~~~l~~~la~-e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~---~~~~----- 227 (249)
.....|+.||+..+.++..... ++.....++..+|.|..|..+...... + .+.+.... ....
T Consensus 134 E~~~~~~~~~~~Y~~SK~~AE~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~d~~~~-~-~~~~~~~~g~~~~~~g~~~~ 211 (280)
T PF01073_consen 134 EDTPYPSSPLDPYAESKALAEKAVLEANGSELKNGGRLRTCALRPAGIYGPGDQRLV-P-RLVKMVRSGLFLFQIGDGNN 211 (280)
T ss_pred cCCcccccccCchHHHHHHHHHHHHhhcccccccccceeEEEEeccEEeCccccccc-c-hhhHHHHhcccceeecCCCc
Confidence 1334799999999999877654 222123599999999999866432221 1 11111111 1111
Q ss_pred -cCCCCHHHHHHHHHHh
Q 025672 228 -YKFGEKWDIAMAALYL 243 (249)
Q Consensus 228 -~~~~~~~dva~~v~~l 243 (249)
.-+...+++|++.+..
T Consensus 212 ~~~~vyV~NvA~ahvlA 228 (280)
T PF01073_consen 212 LFDFVYVENVAHAHVLA 228 (280)
T ss_pred eECcEeHHHHHHHHHHH
Confidence 1255689999988764
|
3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process |
| >PLN02695 GDP-D-mannose-3',5'-epimerase | Back alignment and domain information |
|---|
Probab=99.70 E-value=3.1e-15 Score=128.86 Aligned_cols=204 Identities=18% Similarity=0.075 Sum_probs=139.8
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCc
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 90 (249)
+++++|||||+|.||++++++|.++|++|++++|+.... +........++.+|++|.+.+..++. .+
T Consensus 20 ~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~------~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~ 86 (370)
T PLN02695 20 EKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEH------MSEDMFCHEFHLVDLRVMENCLKVTK-------GV 86 (370)
T ss_pred CCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEeccccc------cccccccceEEECCCCCHHHHHHHHh-------CC
Confidence 679999999999999999999999999999999864321 11111125678899999888766653 48
Q ss_pred cEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc---------
Q 025672 91 DILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT--------- 161 (249)
Q Consensus 91 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~--------- 161 (249)
|+|||+|+.......... +....+..|+.++.++++++... +. .++|++||...+.
T Consensus 87 D~Vih~Aa~~~~~~~~~~---~~~~~~~~N~~~t~nll~aa~~~----~v--------k~~V~~SS~~vYg~~~~~~~~~ 151 (370)
T PLN02695 87 DHVFNLAADMGGMGFIQS---NHSVIMYNNTMISFNMLEAARIN----GV--------KRFFYASSACIYPEFKQLETNV 151 (370)
T ss_pred CEEEEcccccCCcccccc---CchhhHHHHHHHHHHHHHHHHHh----CC--------CEEEEeCchhhcCCccccCcCC
Confidence 999999986432222111 12345678999999999887532 11 4699999864221
Q ss_pred --------cCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccC----CCChHHHHHhhhh---hhc
Q 025672 162 --------ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVS----KLAPEEIRSKATD---YMA 226 (249)
Q Consensus 162 --------~~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~----~~~~~~~~~~~~~---~~~ 226 (249)
+..+...|+.+|.+.+.+++.++.. .|+++..+.|+.+..+.... ...+..+...... .++
T Consensus 152 ~~~E~~~~p~~p~s~Yg~sK~~~E~~~~~~~~~----~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~i~ 227 (370)
T PLN02695 152 SLKESDAWPAEPQDAYGLEKLATEELCKHYTKD----FGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDEFE 227 (370)
T ss_pred CcCcccCCCCCCCCHHHHHHHHHHHHHHHHHHH----hCCCEEEEEECCccCCCCCccccccccHHHHHHHHHcCCCCeE
Confidence 1224558999999999999887654 36999999999999764321 1113333332221 121
Q ss_pred c-------cCCCCHHHHHHHHHHhccC
Q 025672 227 A-------YKFGEKWDIAMAALYLASD 246 (249)
Q Consensus 227 ~-------~~~~~~~dva~~v~~l~s~ 246 (249)
+ ..+...+|+++++.+++..
T Consensus 228 ~~g~g~~~r~~i~v~D~a~ai~~~~~~ 254 (370)
T PLN02695 228 MWGDGKQTRSFTFIDECVEGVLRLTKS 254 (370)
T ss_pred EeCCCCeEEeEEeHHHHHHHHHHHHhc
Confidence 1 2256789999999988754
|
|
| >PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=3e-15 Score=125.85 Aligned_cols=199 Identities=14% Similarity=0.082 Sum_probs=130.5
Q ss_pred EEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHH--HhCCccE
Q 025672 15 ALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN--HFGKLDI 92 (249)
Q Consensus 15 ~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~--~~~~id~ 92 (249)
+|||||+|.||++++++|+++|++++++.|+....... ..+.++|++|..+.+.+++.+.+ .++++|+
T Consensus 2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~~----------~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~ 71 (308)
T PRK11150 2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKF----------VNLVDLDIADYMDKEDFLAQIMAGDDFGDIEA 71 (308)
T ss_pred EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcchHH----------HhhhhhhhhhhhhHHHHHHHHhcccccCCccE
Confidence 79999999999999999999999766655554322111 01234677777666666655542 3457999
Q ss_pred EEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc----------
Q 025672 93 LVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA---------- 162 (249)
Q Consensus 93 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~---------- 162 (249)
|||+|+...... .+. ...++.|+.++.++++++... + .++|++||...+..
T Consensus 72 Vih~A~~~~~~~---~~~---~~~~~~n~~~t~~ll~~~~~~----~---------~~~i~~SS~~vyg~~~~~~~~E~~ 132 (308)
T PRK11150 72 IFHEGACSSTTE---WDG---KYMMDNNYQYSKELLHYCLER----E---------IPFLYASSAATYGGRTDDFIEERE 132 (308)
T ss_pred EEECceecCCcC---CCh---HHHHHHHHHHHHHHHHHHHHc----C---------CcEEEEcchHHhCcCCCCCCccCC
Confidence 999998543221 122 346899999999998887532 1 34999999754321
Q ss_pred -CccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCC-h---HHHHHhhh-hhhc---------c
Q 025672 163 -TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA-P---EEIRSKAT-DYMA---------A 227 (249)
Q Consensus 163 -~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~-~---~~~~~~~~-~~~~---------~ 227 (249)
..+...|+.+|.+.+.+.+.+..+ .++.+..+.|+.+..+....... . ..+.+.+. ...+ .
T Consensus 133 ~~~p~~~Y~~sK~~~E~~~~~~~~~----~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~ 208 (308)
T PRK11150 133 YEKPLNVYGYSKFLFDEYVRQILPE----ANSQICGFRYFNVYGPREGHKGSMASVAFHLNNQLNNGENPKLFEGSENFK 208 (308)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHH----cCCCEEEEeeeeecCCCCCCCCccchhHHHHHHHHhcCCCCEEecCCCcee
Confidence 123457999999999998877654 36899999999998654322111 1 11112121 1111 1
Q ss_pred cCCCCHHHHHHHHHHhccC
Q 025672 228 YKFGEKWDIAMAALYLASD 246 (249)
Q Consensus 228 ~~~~~~~dva~~v~~l~s~ 246 (249)
+-+...+|+++++..++..
T Consensus 209 r~~i~v~D~a~a~~~~~~~ 227 (308)
T PRK11150 209 RDFVYVGDVAAVNLWFWEN 227 (308)
T ss_pred eeeeeHHHHHHHHHHHHhc
Confidence 2246899999998887754
|
|
| >COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.68 E-value=3.9e-15 Score=125.08 Aligned_cols=201 Identities=16% Similarity=0.094 Sum_probs=140.9
Q ss_pred EEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCccEEE
Q 025672 15 ALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILV 94 (249)
Q Consensus 15 ~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi 94 (249)
+|||||+|.||++++.+|.++|++|+.++|......... ..+.++.+|+++.+.+..+++.. .|.||
T Consensus 3 ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-------~~~~~~~~d~~~~~~~~~~~~~~------~d~vi 69 (314)
T COG0451 3 ILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL-------SGVEFVVLDLTDRDLVDELAKGV------PDAVI 69 (314)
T ss_pred EEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc-------cccceeeecccchHHHHHHHhcC------CCEEE
Confidence 899999999999999999999999999999766543322 35788999999996666555532 19999
Q ss_pred EcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC-----------
Q 025672 95 NAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT----------- 163 (249)
Q Consensus 95 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~----------- 163 (249)
|+|+........ .. .....+++|+.++.++++++.. .. ..++|+.||.....+.
T Consensus 70 h~aa~~~~~~~~--~~-~~~~~~~~nv~gt~~ll~aa~~----~~--------~~~~v~~ss~~~~~~~~~~~~~~E~~~ 134 (314)
T COG0451 70 HLAAQSSVPDSN--AS-DPAEFLDVNVDGTLNLLEAARA----AG--------VKRFVFASSVSVVYGDPPPLPIDEDLG 134 (314)
T ss_pred EccccCchhhhh--hh-CHHHHHHHHHHHHHHHHHHHHH----cC--------CCeEEEeCCCceECCCCCCCCcccccC
Confidence 999976532211 11 3456889999999999999886 11 1558887775533321
Q ss_pred ccc--hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCC---CChHHHHHhhhhhhc---cc-------
Q 025672 164 WYQ--IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK---LAPEEIRSKATDYMA---AY------- 228 (249)
Q Consensus 164 ~~~--~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~---~~~~~~~~~~~~~~~---~~------- 228 (249)
+.. ..|+.+|...+.+++....+ +|+.+..+.|+.+..+..... .....+........+ ..
T Consensus 135 ~~~p~~~Yg~sK~~~E~~~~~~~~~----~~~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (314)
T COG0451 135 PPRPLNPYGVSKLAAEQLLRAYARL----YGLPVVILRPFNVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTR 210 (314)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHH----hCCCeEEEeeeeeeCCCCCCCCCcCcHHHHHHHHHhCCCcceEeCCCceeE
Confidence 111 14999999999999988872 369999999998886654443 122222221222221 11
Q ss_pred CCCCHHHHHHHHHHhccCC
Q 025672 229 KFGEKWDIAMAALYLASDA 247 (249)
Q Consensus 229 ~~~~~~dva~~v~~l~s~~ 247 (249)
-+...+|+++++.+++...
T Consensus 211 ~~i~v~D~a~~~~~~~~~~ 229 (314)
T COG0451 211 DFVYVDDVADALLLALENP 229 (314)
T ss_pred eeEeHHHHHHHHHHHHhCC
Confidence 2456899999999998743
|
|
| >PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=5.8e-15 Score=126.17 Aligned_cols=201 Identities=17% Similarity=0.092 Sum_probs=135.4
Q ss_pred cEEEEecCCCchhHHHHHHHHHc-CCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCC-CHHHHHHHHHHHHHHhCCc
Q 025672 13 KVALLTGGGSGIGFEISLQLGKH-GAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVR-KREDAVRVVESTINHFGKL 90 (249)
Q Consensus 13 k~~lItGa~~giG~~~a~~l~~~-G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~-~~~~~~~~~~~~~~~~~~i 90 (249)
+++|||||+|.||++++++|+++ |++|++++|+.+.... +.. ...+.++.+|++ +.+.+..+++ .+
T Consensus 2 ~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~----~~~-~~~~~~~~~Dl~~~~~~~~~~~~-------~~ 69 (347)
T PRK11908 2 KKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGD----LVN-HPRMHFFEGDITINKEWIEYHVK-------KC 69 (347)
T ss_pred cEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHH----hcc-CCCeEEEeCCCCCCHHHHHHHHc-------CC
Confidence 46999999999999999999986 6999999986543222 111 235889999998 6666655543 58
Q ss_pred cEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC-------
Q 025672 91 DILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT------- 163 (249)
Q Consensus 91 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~------- 163 (249)
|+|||+|+...... ..++.+..+++|+.+..++++++... +.++|++||...+...
T Consensus 70 d~ViH~aa~~~~~~----~~~~p~~~~~~n~~~~~~ll~aa~~~-------------~~~~v~~SS~~vyg~~~~~~~~e 132 (347)
T PRK11908 70 DVILPLVAIATPAT----YVKQPLRVFELDFEANLPIVRSAVKY-------------GKHLVFPSTSEVYGMCPDEEFDP 132 (347)
T ss_pred CEEEECcccCChHH----hhcCcHHHHHHHHHHHHHHHHHHHhc-------------CCeEEEEecceeeccCCCcCcCc
Confidence 99999998643221 11233566799999999998887632 1359999986433210
Q ss_pred -----------ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCC--------ChHHHHHhhhhh
Q 025672 164 -----------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL--------APEEIRSKATDY 224 (249)
Q Consensus 164 -----------~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~--------~~~~~~~~~~~~ 224 (249)
.+...|+.+|.+.+.+.+.++.+ +|+.+..+.|+.+..+...... ....+...+...
T Consensus 133 e~~~~~~~~~~~p~~~Y~~sK~~~e~~~~~~~~~----~~~~~~ilR~~~v~Gp~~~~~~~~~~~~~~~i~~~~~~~~~~ 208 (347)
T PRK11908 133 EASPLVYGPINKPRWIYACSKQLMDRVIWAYGME----EGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRG 208 (347)
T ss_pred cccccccCcCCCccchHHHHHHHHHHHHHHHHHH----cCCCeEEEeeeeeeCCCccCCCccccCCcchHHHHHHHHhCC
Confidence 11236999999999999887754 3688888999888765422110 011222222111
Q ss_pred h---------cccCCCCHHHHHHHHHHhccC
Q 025672 225 M---------AAYKFGEKWDIAMAALYLASD 246 (249)
Q Consensus 225 ~---------~~~~~~~~~dva~~v~~l~s~ 246 (249)
. ..+-+...+|+++++..++..
T Consensus 209 ~~~~~~~~g~~~r~~i~v~D~a~a~~~~~~~ 239 (347)
T PRK11908 209 EPISLVDGGSQKRAFTDIDDGIDALMKIIEN 239 (347)
T ss_pred CceEEecCCceeeccccHHHHHHHHHHHHhC
Confidence 1 122367899999999998864
|
|
| >PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated | Back alignment and domain information |
|---|
Probab=99.67 E-value=5e-15 Score=136.41 Aligned_cols=204 Identities=15% Similarity=0.059 Sum_probs=139.3
Q ss_pred CCCcEEEEecCCCchhHHHHHHHHHc-CCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHH-HHHHHHHHHHHh
Q 025672 10 LKGKVALLTGGGSGIGFEISLQLGKH-GAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKRED-AVRVVESTINHF 87 (249)
Q Consensus 10 l~~k~~lItGa~~giG~~~a~~l~~~-G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~-~~~~~~~~~~~~ 87 (249)
.+++++|||||+|.||++++++|+++ |++|+.++|+....... . . ..++.++.+|++|.++ ++++++
T Consensus 313 ~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~~---~-~-~~~~~~~~gDl~d~~~~l~~~l~------ 381 (660)
T PRK08125 313 KRRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISRF---L-G-HPRFHFVEGDISIHSEWIEYHIK------ 381 (660)
T ss_pred hcCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhhh---c-C-CCceEEEeccccCcHHHHHHHhc------
Confidence 46789999999999999999999986 79999999876432221 1 1 2368899999999665 344332
Q ss_pred CCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC----
Q 025672 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT---- 163 (249)
Q Consensus 88 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~---- 163 (249)
.+|+|||+|+....... .++.+..+++|+.+..++++++...- .++|++||...+...
T Consensus 382 -~~D~ViHlAa~~~~~~~----~~~~~~~~~~Nv~~t~~ll~a~~~~~-------------~~~V~~SS~~vyg~~~~~~ 443 (660)
T PRK08125 382 -KCDVVLPLVAIATPIEY----TRNPLRVFELDFEENLKIIRYCVKYN-------------KRIIFPSTSEVYGMCTDKY 443 (660)
T ss_pred -CCCEEEECccccCchhh----ccCHHHHHHhhHHHHHHHHHHHHhcC-------------CeEEEEcchhhcCCCCCCC
Confidence 58999999996543211 12234578899999999999887431 349999996433210
Q ss_pred --------------ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCC--------CChHHHHHhh
Q 025672 164 --------------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK--------LAPEEIRSKA 221 (249)
Q Consensus 164 --------------~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~--------~~~~~~~~~~ 221 (249)
.+...|+.+|.+.+.+++.++++ +|+++..+.|+.+..+..... .....+...+
T Consensus 444 ~~E~~~~~~~~p~~~p~s~Yg~sK~~~E~~~~~~~~~----~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~i~~~i~~~ 519 (660)
T PRK08125 444 FDEDTSNLIVGPINKQRWIYSVSKQLLDRVIWAYGEK----EGLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNL 519 (660)
T ss_pred cCccccccccCCCCCCccchHHHHHHHHHHHHHHHHh----cCCceEEEEEceeeCCCccccccccccccchHHHHHHHh
Confidence 11236999999999999888754 369999999999986642210 0111222222
Q ss_pred hhhhc---------ccCCCCHHHHHHHHHHhccC
Q 025672 222 TDYMA---------AYKFGEKWDIAMAALYLASD 246 (249)
Q Consensus 222 ~~~~~---------~~~~~~~~dva~~v~~l~s~ 246 (249)
....+ .+-+...+|++++++.+++.
T Consensus 520 ~~~~~i~~~g~g~~~rd~i~v~Dva~a~~~~l~~ 553 (660)
T PRK08125 520 VEGSPIKLVDGGKQKRCFTDIRDGIEALFRIIEN 553 (660)
T ss_pred cCCCCeEEeCCCceeeceeeHHHHHHHHHHHHhc
Confidence 21111 12256799999999888753
|
|
| >COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.67 E-value=3.9e-15 Score=120.06 Aligned_cols=157 Identities=23% Similarity=0.145 Sum_probs=119.5
Q ss_pred cEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCccE
Q 025672 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI 92 (249)
Q Consensus 13 k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ 92 (249)
+++|||||+|-||++.+.+|++.|++|+++|.-........... ...|++.|+.|.+-++++|++. +||.
T Consensus 1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~-----~~~f~~gDi~D~~~L~~vf~~~-----~ida 70 (329)
T COG1087 1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKL-----QFKFYEGDLLDRALLTAVFEEN-----KIDA 70 (329)
T ss_pred CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhc-----cCceEEeccccHHHHHHHHHhc-----CCCE
Confidence 47899999999999999999999999999997655433322221 1679999999999999999875 7999
Q ss_pred EEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc-----------
Q 025672 93 LVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT----------- 161 (249)
Q Consensus 93 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~----------- 161 (249)
|||.||....+ -+.+...+.++.|+.|++.|++++...-. -+|||-||.+-+.
T Consensus 71 ViHFAa~~~Vg----ESv~~Pl~Yy~NNv~gTl~Ll~am~~~gv------------~~~vFSStAavYG~p~~~PI~E~~ 134 (329)
T COG1087 71 VVHFAASISVG----ESVQNPLKYYDNNVVGTLNLIEAMLQTGV------------KKFIFSSTAAVYGEPTTSPISETS 134 (329)
T ss_pred EEECccccccc----hhhhCHHHHHhhchHhHHHHHHHHHHhCC------------CEEEEecchhhcCCCCCcccCCCC
Confidence 99999964422 24566688999999999999888775532 2377666654321
Q ss_pred cCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEe
Q 025672 162 ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIA 199 (249)
Q Consensus 162 ~~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~ 199 (249)
+..+..+|+.||...+.+.+.+++.. +.++..+.
T Consensus 135 ~~~p~NPYG~sKlm~E~iL~d~~~a~----~~~~v~LR 168 (329)
T COG1087 135 PLAPINPYGRSKLMSEEILRDAAKAN----PFKVVILR 168 (329)
T ss_pred CCCCCCcchhHHHHHHHHHHHHHHhC----CCcEEEEE
Confidence 12345679999999999999999753 46666654
|
|
| >TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase | Back alignment and domain information |
|---|
Probab=99.65 E-value=1.4e-14 Score=121.82 Aligned_cols=201 Identities=15% Similarity=0.108 Sum_probs=133.2
Q ss_pred EEEecCCCchhHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCccEE
Q 025672 15 ALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDIL 93 (249)
Q Consensus 15 ~lItGa~~giG~~~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~v 93 (249)
+|||||+|.||.++++.|.++|+ +|++++|..... ... ++ . ...+..|+.+.+.++.+.+. .+..+|+|
T Consensus 1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~-~~~-~~---~--~~~~~~d~~~~~~~~~~~~~---~~~~~D~v 70 (314)
T TIGR02197 1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGH-KFL-NL---A--DLVIADYIDKEDFLDRLEKG---AFGKIEAI 70 (314)
T ss_pred CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCch-hhh-hh---h--heeeeccCcchhHHHHHHhh---ccCCCCEE
Confidence 58999999999999999999998 688887654321 111 11 1 13466788887777666543 34679999
Q ss_pred EEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc-----------
Q 025672 94 VNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA----------- 162 (249)
Q Consensus 94 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~----------- 162 (249)
||+|+.... ..++....+++|+.++.++++++... +.++|++||...+..
T Consensus 71 vh~A~~~~~------~~~~~~~~~~~n~~~~~~ll~~~~~~-------------~~~~v~~SS~~vy~~~~~~~~e~~~~ 131 (314)
T TIGR02197 71 FHQGACSDT------TETDGEYMMENNYQYSKRLLDWCAEK-------------GIPFIYASSAATYGDGEAGFREGREL 131 (314)
T ss_pred EECccccCc------cccchHHHHHHHHHHHHHHHHHHHHh-------------CCcEEEEccHHhcCCCCCCcccccCc
Confidence 999996321 22345678899999999999887642 145999999653321
Q ss_pred CccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCC----hHHHHHhhhhh--hcc---------
Q 025672 163 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA----PEEIRSKATDY--MAA--------- 227 (249)
Q Consensus 163 ~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~----~~~~~~~~~~~--~~~--------- 227 (249)
..+...|+.+|.+.+.+++....+. ..++++..+.|+.+..+....... ...+...+... +..
T Consensus 132 ~~p~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (314)
T TIGR02197 132 ERPLNVYGYSKFLFDQYVRRRVLPE--ALSAQVVGLRYFNVYGPREYHKGKMASVAFHLFNQIKAGGNVKLFKSSEGFKD 209 (314)
T ss_pred CCCCCHHHHHHHHHHHHHHHHhHhh--ccCCceEEEEEeeccCCCCCCCCCcccHHHHHHHHHhcCCCeEEecCccccCC
Confidence 1245679999999999998643322 235788889998888654321111 11222222211 111
Q ss_pred ----cCCCCHHHHHHHHHHhccC
Q 025672 228 ----YKFGEKWDIAMAALYLASD 246 (249)
Q Consensus 228 ----~~~~~~~dva~~v~~l~s~ 246 (249)
+-+...+|+++++..++..
T Consensus 210 g~~~~~~i~v~D~a~~i~~~~~~ 232 (314)
T TIGR02197 210 GEQLRDFVYVKDVVDVNLWLLEN 232 (314)
T ss_pred CCceeeeEEHHHHHHHHHHHHhc
Confidence 2356789999999998764
|
This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370). |
| >PLN02206 UDP-glucuronate decarboxylase | Back alignment and domain information |
|---|
Probab=99.65 E-value=1.2e-14 Score=127.55 Aligned_cols=201 Identities=15% Similarity=0.064 Sum_probs=135.1
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchH-HHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCC
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVL-RSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK 89 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 89 (249)
+++++|||||+|.||++++++|+++|++|++++|..... +.....+ ...++.++..|+.++. + ..
T Consensus 118 ~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~~~~~~~--~~~~~~~i~~D~~~~~-----l-------~~ 183 (442)
T PLN02206 118 KGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKENVMHHF--SNPNFELIRHDVVEPI-----L-------LE 183 (442)
T ss_pred CCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchhhhhhhc--cCCceEEEECCccChh-----h-------cC
Confidence 578999999999999999999999999999988753322 2221111 1346788899987652 1 25
Q ss_pred ccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc-------
Q 025672 90 LDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA------- 162 (249)
Q Consensus 90 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~------- 162 (249)
+|+|||+|+....... ..+....+++|+.++.++++++... +.++|++||...+..
T Consensus 184 ~D~ViHlAa~~~~~~~----~~~p~~~~~~Nv~gt~nLleaa~~~-------------g~r~V~~SS~~VYg~~~~~p~~ 246 (442)
T PLN02206 184 VDQIYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLAKRV-------------GARFLLTSTSEVYGDPLQHPQV 246 (442)
T ss_pred CCEEEEeeeecchhhh----hcCHHHHHHHHHHHHHHHHHHHHHh-------------CCEEEEECChHHhCCCCCCCCC
Confidence 8999999986432211 1123577899999999999988643 135999999754321
Q ss_pred ---------CccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCC--CChHHHHHhhhhh--hcc--
Q 025672 163 ---------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK--LAPEEIRSKATDY--MAA-- 227 (249)
Q Consensus 163 ---------~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~--~~~~~~~~~~~~~--~~~-- 227 (249)
..+...|+.+|.+.+.+++.+.+. +|+++..+.|+.+..+..... .....+....... +..
T Consensus 247 E~~~~~~~P~~~~s~Y~~SK~~aE~~~~~y~~~----~g~~~~ilR~~~vyGp~~~~~~~~~v~~~i~~~l~~~~i~i~g 322 (442)
T PLN02206 247 ETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRG----ANVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYG 322 (442)
T ss_pred ccccccCCCCCccchHHHHHHHHHHHHHHHHHH----hCCCeEEEEeccccCCCCCccccchHHHHHHHHHcCCCcEEeC
Confidence 112457999999999988877554 368999999988886542211 1112222222211 111
Q ss_pred -----cCCCCHHHHHHHHHHhccC
Q 025672 228 -----YKFGEKWDIAMAALYLASD 246 (249)
Q Consensus 228 -----~~~~~~~dva~~v~~l~s~ 246 (249)
+-+...+|+++++..++..
T Consensus 323 ~G~~~rdfi~V~Dva~ai~~a~e~ 346 (442)
T PLN02206 323 DGKQTRSFQFVSDLVEGLMRLMEG 346 (442)
T ss_pred CCCEEEeEEeHHHHHHHHHHHHhc
Confidence 1256789999999988753
|
|
| >TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase | Back alignment and domain information |
|---|
Probab=99.65 E-value=1.6e-14 Score=120.10 Aligned_cols=181 Identities=16% Similarity=0.122 Sum_probs=127.1
Q ss_pred EEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCccEE
Q 025672 14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDIL 93 (249)
Q Consensus 14 ~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~v 93 (249)
++|||||+|.||.+++++|.++|++|++++|+ .+|+.|.++++++++.. .+|+|
T Consensus 1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~---------------------~~d~~~~~~~~~~~~~~-----~~d~v 54 (287)
T TIGR01214 1 RILITGANGQLGRELVQQLSPEGRVVVALTSS---------------------QLDLTDPEALERLLRAI-----RPDAV 54 (287)
T ss_pred CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc---------------------ccCCCCHHHHHHHHHhC-----CCCEE
Confidence 37999999999999999999999999999885 36999999999888753 58999
Q ss_pred EEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc-----------
Q 025672 94 VNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA----------- 162 (249)
Q Consensus 94 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~----------- 162 (249)
||+++...... ........+++|+.++.++++++... +.++|++||...+.+
T Consensus 55 i~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~-------------~~~~v~~Ss~~vy~~~~~~~~~E~~~ 117 (287)
T TIGR01214 55 VNTAAYTDVDG----AESDPEKAFAVNALAPQNLARAAARH-------------GARLVHISTDYVFDGEGKRPYREDDA 117 (287)
T ss_pred EECCccccccc----cccCHHHHHHHHHHHHHHHHHHHHHc-------------CCeEEEEeeeeeecCCCCCCCCCCCC
Confidence 99998643211 12234567899999999999887532 145999998643321
Q ss_pred CccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhc-------ccCCCCHHH
Q 025672 163 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMA-------AYKFGEKWD 235 (249)
Q Consensus 163 ~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~d 235 (249)
..+...|+.+|.+.+.+++.+ +.++..+.|+.+..+...... ...+........+ ..-+...+|
T Consensus 118 ~~~~~~Y~~~K~~~E~~~~~~--------~~~~~ilR~~~v~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~v~D 188 (287)
T TIGR01214 118 TNPLNVYGQSKLAGEQAIRAA--------GPNALIVRTSWLYGGGGGRNF-VRTMLRLAGRGEELRVVDDQIGSPTYAKD 188 (287)
T ss_pred CCCcchhhHHHHHHHHHHHHh--------CCCeEEEEeeecccCCCCCCH-HHHHHHHhhcCCCceEecCCCcCCcCHHH
Confidence 113457999999988877654 346889999999865421111 1222222221111 122456799
Q ss_pred HHHHHHHhccC
Q 025672 236 IAMAALYLASD 246 (249)
Q Consensus 236 va~~v~~l~s~ 246 (249)
+++++..++..
T Consensus 189 va~a~~~~~~~ 199 (287)
T TIGR01214 189 LARVIAALLQR 199 (287)
T ss_pred HHHHHHHHHhh
Confidence 99999998854
|
This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc. |
| >PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase | Back alignment and domain information |
|---|
Probab=99.65 E-value=4.9e-15 Score=128.32 Aligned_cols=166 Identities=17% Similarity=0.106 Sum_probs=120.2
Q ss_pred CCCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHH--HHHHHHhcCCCeeEEEccCCCHHHHHHHHHHH
Q 025672 6 KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRS--AVAALHSLGIPAIGLEGDVRKREDAVRVVEST 83 (249)
Q Consensus 6 ~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~--~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 83 (249)
+....++++++||||+|+||++++++|+++|++|++++|+....+. ..+++......+.++.+|++|.++++.+++..
T Consensus 54 ~~~~~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~ 133 (390)
T PLN02657 54 RSKEPKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSE 133 (390)
T ss_pred cccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHh
Confidence 3445678899999999999999999999999999999998764321 11222222346889999999999999988753
Q ss_pred HHHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC
Q 025672 84 INHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT 163 (249)
Q Consensus 84 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~ 163 (249)
.+++|+||||++..... . ...+++|+.+..++++++. +.+. .++|++||.....
T Consensus 134 ---~~~~D~Vi~~aa~~~~~-----~----~~~~~vn~~~~~~ll~aa~----~~gv--------~r~V~iSS~~v~~-- 187 (390)
T PLN02657 134 ---GDPVDVVVSCLASRTGG-----V----KDSWKIDYQATKNSLDAGR----EVGA--------KHFVLLSAICVQK-- 187 (390)
T ss_pred ---CCCCcEEEECCccCCCC-----C----ccchhhHHHHHHHHHHHHH----HcCC--------CEEEEEeeccccC--
Confidence 12699999998842211 1 1235678888888877764 2222 6799999986543
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccc
Q 025672 164 WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK 204 (249)
Q Consensus 164 ~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~ 204 (249)
+...|..+|...+...+. . ..+++...|.|+.+.
T Consensus 188 -p~~~~~~sK~~~E~~l~~-----~-~~gl~~tIlRp~~~~ 221 (390)
T PLN02657 188 -PLLEFQRAKLKFEAELQA-----L-DSDFTYSIVRPTAFF 221 (390)
T ss_pred -cchHHHHHHHHHHHHHHh-----c-cCCCCEEEEccHHHh
Confidence 345688888888776543 2 458999999998876
|
|
| >PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase | Back alignment and domain information |
|---|
Probab=99.62 E-value=1.8e-14 Score=120.84 Aligned_cols=187 Identities=15% Similarity=0.069 Sum_probs=127.8
Q ss_pred EEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCccEEEE
Q 025672 16 LLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVN 95 (249)
Q Consensus 16 lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~ 95 (249)
|||||+|.||.++++.|++.|++|+++.++. .+|++|.++++++++.. .+|+|||
T Consensus 1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~~--------------------~~Dl~~~~~l~~~~~~~-----~~d~Vih 55 (306)
T PLN02725 1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTHK--------------------ELDLTRQADVEAFFAKE-----KPTYVIL 55 (306)
T ss_pred CcccCCCcccHHHHHHHHhCCCcEEEeeccc--------------------cCCCCCHHHHHHHHhcc-----CCCEEEE
Confidence 6999999999999999999999877664321 37999999999887753 5899999
Q ss_pred cCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC------------
Q 025672 96 AAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT------------ 163 (249)
Q Consensus 96 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~------------ 163 (249)
+|+....... ..+.....+++|+.++.++++++... +. .++|++||..-+.+.
T Consensus 56 ~A~~~~~~~~---~~~~~~~~~~~n~~~~~~ll~~~~~~----~~--------~~~i~~SS~~vyg~~~~~~~~E~~~~~ 120 (306)
T PLN02725 56 AAAKVGGIHA---NMTYPADFIRENLQIQTNVIDAAYRH----GV--------KKLLFLGSSCIYPKFAPQPIPETALLT 120 (306)
T ss_pred eeeeecccch---hhhCcHHHHHHHhHHHHHHHHHHHHc----CC--------CeEEEeCceeecCCCCCCCCCHHHhcc
Confidence 9986431110 11123456889999999998888643 11 569999986432211
Q ss_pred -c--c-chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCC----CChHHHHHhh----hh--------
Q 025672 164 -W--Y-QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK----LAPEEIRSKA----TD-------- 223 (249)
Q Consensus 164 -~--~-~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~----~~~~~~~~~~----~~-------- 223 (249)
+ + ...|+.+|.+.+.+.+.+.++ +++++..+.|+.+..+..... .....+...+ ..
T Consensus 121 ~~~~p~~~~Y~~sK~~~e~~~~~~~~~----~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 196 (306)
T PLN02725 121 GPPEPTNEWYAIAKIAGIKMCQAYRIQ----YGWDAISGMPTNLYGPHDNFHPENSHVIPALIRRFHEAKANGAPEVVVW 196 (306)
T ss_pred CCCCCCcchHHHHHHHHHHHHHHHHHH----hCCCEEEEEecceeCCCCCCCCCCCcccHHHHHHHHHHhhcCCCeEEEc
Confidence 1 1 224999999999888887654 368999999999986642110 0011222111 11
Q ss_pred --hhcccCCCCHHHHHHHHHHhccC
Q 025672 224 --YMAAYKFGEKWDIAMAALYLASD 246 (249)
Q Consensus 224 --~~~~~~~~~~~dva~~v~~l~s~ 246 (249)
..+...+...+|++++++++++.
T Consensus 197 ~~g~~~~~~i~v~Dv~~~~~~~~~~ 221 (306)
T PLN02725 197 GSGSPLREFLHVDDLADAVVFLMRR 221 (306)
T ss_pred CCCCeeeccccHHHHHHHHHHHHhc
Confidence 11123467899999999998864
|
|
| >PLN02166 dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.62 E-value=4.8e-14 Score=123.60 Aligned_cols=202 Identities=13% Similarity=0.037 Sum_probs=134.6
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCc
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 90 (249)
+.++++||||+|.||++++++|+++|++|++++|...........+. ...++.++..|+.+.. + ..+
T Consensus 119 ~~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~~~~-~~~~~~~~~~Di~~~~-----~-------~~~ 185 (436)
T PLN02166 119 KRLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHLF-GNPRFELIRHDVVEPI-----L-------LEV 185 (436)
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhhhhc-cCCceEEEECcccccc-----c-------cCC
Confidence 35789999999999999999999999999999986432121111111 1236788889987642 1 258
Q ss_pred cEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc---------
Q 025672 91 DILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT--------- 161 (249)
Q Consensus 91 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~--------- 161 (249)
|+|||+|+....... . .+-...+++|+.++.++++++... +.++|++||...+.
T Consensus 186 D~ViHlAa~~~~~~~-~---~~p~~~~~~Nv~gT~nLleaa~~~-------------g~r~V~~SS~~VYg~~~~~p~~E 248 (436)
T PLN02166 186 DQIYHLACPASPVHY-K---YNPVKTIKTNVMGTLNMLGLAKRV-------------GARFLLTSTSEVYGDPLEHPQKE 248 (436)
T ss_pred CEEEECceeccchhh-c---cCHHHHHHHHHHHHHHHHHHHHHh-------------CCEEEEECcHHHhCCCCCCCCCc
Confidence 999999986432211 1 123577899999999999888643 13599998875332
Q ss_pred -------cCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCC--CChHHHHHhhhhhhc------
Q 025672 162 -------ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK--LAPEEIRSKATDYMA------ 226 (249)
Q Consensus 162 -------~~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~--~~~~~~~~~~~~~~~------ 226 (249)
+..+...|+.+|.+.+.+++...+. .++.+..+.|+.+..+..... .....+...+....+
T Consensus 249 ~~~~~~~p~~p~s~Yg~SK~~aE~~~~~y~~~----~~l~~~ilR~~~vYGp~~~~~~~~~i~~~i~~~l~~~~i~v~g~ 324 (436)
T PLN02166 249 TYWGNVNPIGERSCYDEGKRTAETLAMDYHRG----AGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQTIRKQPMTVYGD 324 (436)
T ss_pred cccccCCCCCCCCchHHHHHHHHHHHHHHHHH----hCCCeEEEEEccccCCCCCCCccchHHHHHHHHhcCCCcEEeCC
Confidence 1112456999999999999887654 368899999998886643211 111222222222111
Q ss_pred ---ccCCCCHHHHHHHHHHhccC
Q 025672 227 ---AYKFGEKWDIAMAALYLASD 246 (249)
Q Consensus 227 ---~~~~~~~~dva~~v~~l~s~ 246 (249)
.+-+...+|+++++..++..
T Consensus 325 g~~~rdfi~V~Dva~ai~~~~~~ 347 (436)
T PLN02166 325 GKQTRSFQYVSDLVDGLVALMEG 347 (436)
T ss_pred CCeEEeeEEHHHHHHHHHHHHhc
Confidence 12256789999999988753
|
|
| >PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B | Back alignment and domain information |
|---|
Probab=99.59 E-value=8.7e-14 Score=108.07 Aligned_cols=173 Identities=15% Similarity=0.117 Sum_probs=121.7
Q ss_pred EEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCccEEE
Q 025672 15 ALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILV 94 (249)
Q Consensus 15 ~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi 94 (249)
|+|+||+|.+|+.++++|+++|++|+++.|++++.+. ..+++++.+|+.|++++.++++ ..|.||
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~--------~~~~~~~~~d~~d~~~~~~al~-------~~d~vi 65 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED--------SPGVEIIQGDLFDPDSVKAALK-------GADAVI 65 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH--------CTTEEEEESCTTCHHHHHHHHT-------TSSEEE
T ss_pred eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc--------ccccccceeeehhhhhhhhhhh-------hcchhh
Confidence 6899999999999999999999999999999987665 4689999999999988887765 689999
Q ss_pred EcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCcc---------
Q 025672 95 NAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY--------- 165 (249)
Q Consensus 95 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~--------- 165 (249)
+++|.... + ...++.++..+++.+. .++|++|+.......+.
T Consensus 66 ~~~~~~~~---------~------------~~~~~~~~~a~~~~~~--------~~~v~~s~~~~~~~~~~~~~~~~~~~ 116 (183)
T PF13460_consen 66 HAAGPPPK---------D------------VDAAKNIIEAAKKAGV--------KRVVYLSSAGVYRDPPGLFSDEDKPI 116 (183)
T ss_dssp ECCHSTTT---------H------------HHHHHHHHHHHHHTTS--------SEEEEEEETTGTTTCTSEEEGGTCGG
T ss_pred hhhhhhcc---------c------------cccccccccccccccc--------ccceeeeccccCCCCCcccccccccc
Confidence 99974321 1 4445566666666543 67999998876554332
Q ss_pred chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhcc
Q 025672 166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245 (249)
Q Consensus 166 ~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s 245 (249)
...|...|...+.+. . ..+++...+.||++..+...... +... .........+.+|+|++++.++.
T Consensus 117 ~~~~~~~~~~~e~~~-------~-~~~~~~~ivrp~~~~~~~~~~~~----~~~~--~~~~~~~~i~~~DvA~~~~~~l~ 182 (183)
T PF13460_consen 117 FPEYARDKREAEEAL-------R-ESGLNWTIVRPGWIYGNPSRSYR----LIKE--GGPQGVNFISREDVAKAIVEALE 182 (183)
T ss_dssp GHHHHHHHHHHHHHH-------H-HSTSEEEEEEESEEEBTTSSSEE----EESS--TSTTSHCEEEHHHHHHHHHHHHH
T ss_pred hhhhHHHHHHHHHHH-------H-hcCCCEEEEECcEeEeCCCccee----EEec--cCCCCcCcCCHHHHHHHHHHHhC
Confidence 124555554443333 2 34899999999999865322110 0000 11111245678999999998875
|
... |
| >CHL00194 ycf39 Ycf39; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=7.1e-14 Score=118.02 Aligned_cols=188 Identities=15% Similarity=0.056 Sum_probs=121.9
Q ss_pred EEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCccEE
Q 025672 14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDIL 93 (249)
Q Consensus 14 ~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~v 93 (249)
+++||||+|.||++++++|+++|++|++++|+.+.... +.. ..+.++.+|++|++++..+++ .+|+|
T Consensus 2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~----l~~--~~v~~v~~Dl~d~~~l~~al~-------g~d~V 68 (317)
T CHL00194 2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASF----LKE--WGAELVYGDLSLPETLPPSFK-------GVTAI 68 (317)
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhh----Hhh--cCCEEEECCCCCHHHHHHHHC-------CCCEE
Confidence 69999999999999999999999999999998654322 111 258899999999999877765 58999
Q ss_pred EEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhhHHHH
Q 025672 94 VNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAK 173 (249)
Q Consensus 94 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~~sK 173 (249)
||+++.... +.....++|+.++.++++++... +. .++|++||..... . +...|..+|
T Consensus 69 i~~~~~~~~---------~~~~~~~~~~~~~~~l~~aa~~~----gv--------kr~I~~Ss~~~~~-~-~~~~~~~~K 125 (317)
T CHL00194 69 IDASTSRPS---------DLYNAKQIDWDGKLALIEAAKAA----KI--------KRFIFFSILNAEQ-Y-PYIPLMKLK 125 (317)
T ss_pred EECCCCCCC---------CccchhhhhHHHHHHHHHHHHHc----CC--------CEEEEeccccccc-c-CCChHHHHH
Confidence 998763211 12335668888888888777532 21 4699999854321 1 234577788
Q ss_pred HHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHh---hhhhhcccCCCCHHHHHHHHHHhccC
Q 025672 174 AAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSK---ATDYMAAYKFGEKWDIAMAALYLASD 246 (249)
Q Consensus 174 ~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~dva~~v~~l~s~ 246 (249)
...+.+.+ ..|+....+.|+.+... .......+-+... .........+.+.+|+|+++..++..
T Consensus 126 ~~~e~~l~--------~~~l~~tilRp~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~ 192 (317)
T CHL00194 126 SDIEQKLK--------KSGIPYTIFRLAGFFQG-LISQYAIPILEKQPIWITNESTPISYIDTQDAAKFCLKSLSL 192 (317)
T ss_pred HHHHHHHH--------HcCCCeEEEeecHHhhh-hhhhhhhhhccCCceEecCCCCccCccCHHHHHHHHHHHhcC
Confidence 77665542 34688888999876521 1110000000000 00000011245679999999888753
|
|
| >KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.55 E-value=9e-14 Score=113.28 Aligned_cols=155 Identities=23% Similarity=0.207 Sum_probs=118.2
Q ss_pred CcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcch-HHHH--HHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhC
Q 025672 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTV-LRSA--VAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (249)
Q Consensus 12 ~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~-~~~~--~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 88 (249)
+++||||||+|-||.+.+.+|.++|+.|+++|.-... ++.+ .+++...+.++.+++.|+.|.+.++++|+..
T Consensus 2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~----- 76 (343)
T KOG1371|consen 2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEV----- 76 (343)
T ss_pred CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhc-----
Confidence 6899999999999999999999999999998853222 2222 2222222578999999999999999999876
Q ss_pred CccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc------
Q 025672 89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA------ 162 (249)
Q Consensus 89 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~------ 162 (249)
.+|.|+|-|+....+ .+.+......+.|+.|+++++..+..+-. ..+|+.||..-+..
T Consensus 77 ~fd~V~Hfa~~~~vg----eS~~~p~~Y~~nNi~gtlnlLe~~~~~~~------------~~~V~sssatvYG~p~~ip~ 140 (343)
T KOG1371|consen 77 KFDAVMHFAALAAVG----ESMENPLSYYHNNIAGTLNLLEVMKAHNV------------KALVFSSSATVYGLPTKVPI 140 (343)
T ss_pred CCceEEeehhhhccc----hhhhCchhheehhhhhHHHHHHHHHHcCC------------ceEEEecceeeecCcceeec
Confidence 599999999865432 23344478899999999999887765531 44888888764321
Q ss_pred -----C-ccchhhHHHHHHHHHHHHHHHHHh
Q 025672 163 -----T-WYQIHVSAAKAAVDSITRSLALEW 187 (249)
Q Consensus 163 -----~-~~~~~y~~sK~a~~~l~~~la~e~ 187 (249)
. .+...|+.+|.+++.+.+....-+
T Consensus 141 te~~~t~~p~~pyg~tK~~iE~i~~d~~~~~ 171 (343)
T KOG1371|consen 141 TEEDPTDQPTNPYGKTKKAIEEIIHDYNKAY 171 (343)
T ss_pred cCcCCCCCCCCcchhhhHHHHHHHHhhhccc
Confidence 1 256679999999999998888753
|
|
| >PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=1.3e-13 Score=115.40 Aligned_cols=145 Identities=17% Similarity=0.162 Sum_probs=106.6
Q ss_pred EEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCccEE
Q 025672 14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDIL 93 (249)
Q Consensus 14 ~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~v 93 (249)
++|||||+|.||++++++|.++| +|+.++|... .+..|++|.+.+.++++.. ++|+|
T Consensus 2 ~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~-----------------~~~~Dl~d~~~~~~~~~~~-----~~D~V 58 (299)
T PRK09987 2 NILLFGKTGQVGWELQRALAPLG-NLIALDVHST-----------------DYCGDFSNPEGVAETVRKI-----RPDVI 58 (299)
T ss_pred eEEEECCCCHHHHHHHHHhhccC-CEEEeccccc-----------------cccCCCCCHHHHHHHHHhc-----CCCEE
Confidence 69999999999999999999999 7888887532 2457999999998888753 58999
Q ss_pred EEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc-----------c
Q 025672 94 VNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT-----------A 162 (249)
Q Consensus 94 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~-----------~ 162 (249)
||+|+...... ..++-+..+++|+.++.++++++... +.++|++||..-+. +
T Consensus 59 ih~Aa~~~~~~----~~~~~~~~~~~N~~~~~~l~~aa~~~-------------g~~~v~~Ss~~Vy~~~~~~p~~E~~~ 121 (299)
T PRK09987 59 VNAAAHTAVDK----AESEPEFAQLLNATSVEAIAKAANEV-------------GAWVVHYSTDYVFPGTGDIPWQETDA 121 (299)
T ss_pred EECCccCCcch----hhcCHHHHHHHHHHHHHHHHHHHHHc-------------CCeEEEEccceEECCCCCCCcCCCCC
Confidence 99999654221 12223566789999999999888643 13589998854321 1
Q ss_pred CccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccc
Q 025672 163 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDT 206 (249)
Q Consensus 163 ~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~ 206 (249)
..+...|+.+|.+.+.+++... . ....+.|+++..+
T Consensus 122 ~~P~~~Yg~sK~~~E~~~~~~~-----~---~~~ilR~~~vyGp 157 (299)
T PRK09987 122 TAPLNVYGETKLAGEKALQEHC-----A---KHLIFRTSWVYAG 157 (299)
T ss_pred CCCCCHHHHHHHHHHHHHHHhC-----C---CEEEEecceecCC
Confidence 1234579999999988886542 2 2367778888754
|
|
| >PF08643 DUF1776: Fungal family of unknown function (DUF1776); InterPro: IPR013952 This is a fungal protein of unknown function | Back alignment and domain information |
|---|
Probab=99.51 E-value=2.5e-12 Score=105.56 Aligned_cols=185 Identities=14% Similarity=0.115 Sum_probs=150.2
Q ss_pred CcEEEEecC-CCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhC--
Q 025672 12 GKVALLTGG-GSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG-- 88 (249)
Q Consensus 12 ~k~~lItGa-~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~-- 88 (249)
..+|+|.|. +.-|++.+|..|-++|+-|+++..+.++.+.+.++- ...+.....|..++.++...+.++.+.+.
T Consensus 3 ~evVvI~Gs~~~PltR~la~DLeRRGFIV~v~~~~~ed~~~ve~e~---~~dI~~L~ld~~~~~~~~~~l~~f~~~L~~p 79 (299)
T PF08643_consen 3 KEVVVIAGSPHDPLTRSLALDLERRGFIVYVTVSSAEDEKYVESED---RPDIRPLWLDDSDPSSIHASLSRFASLLSRP 79 (299)
T ss_pred eeEEEEECCCCCccHHHHHHHHhhCCeEEEEEeCCHHHHHHHHhcc---CCCCCCcccCCCCCcchHHHHHHHHHHhcCC
Confidence 468899996 789999999999999999999998877655554443 23477777899888888888888776554
Q ss_pred ------------CccEEEEcCCCCC-CCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEec
Q 025672 89 ------------KLDILVNAAAGNF-LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINIS 155 (249)
Q Consensus 89 ------------~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~is 155 (249)
.+..||..+.... .+|++.++.++|.+.++.|+..++..++.++|.++.+... ..+||.++
T Consensus 80 ~~p~~~~~~h~l~L~svi~~Psl~yp~gPie~i~~s~~~~~ln~~ll~~~~~~q~lLPlL~~~~~~------~~~iil~~ 153 (299)
T PF08643_consen 80 HVPFPGAPPHHLQLKSVIFIPSLSYPTGPIETISPSSWADELNTRLLTPILTIQGLLPLLRSRSNQ------KSKIILFN 153 (299)
T ss_pred CCCCCCCCCceeEEEEEEEecCCCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC------CceEEEEe
Confidence 3566777666543 5789999999999999999999999999999999873311 25566554
Q ss_pred -cccccccCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccc
Q 025672 156 -ATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDT 206 (249)
Q Consensus 156 -s~~~~~~~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~ 206 (249)
|...-...|+.+.-.+..+++.+|++.|++|+. +.||.|..|..|.++-.
T Consensus 154 Psi~ssl~~PfhspE~~~~~al~~~~~~LrrEl~-~~~I~V~~i~LG~l~i~ 204 (299)
T PF08643_consen 154 PSISSSLNPPFHSPESIVSSALSSFFTSLRRELR-PHNIDVTQIKLGNLDIG 204 (299)
T ss_pred CchhhccCCCccCHHHHHHHHHHHHHHHHHHHhh-hcCCceEEEEeeeeccc
Confidence 566666778888899999999999999999998 89999999999998744
|
One of the proteins P32792 from SWISSPROT has been localised to the mitochondria []. |
| >PLN02996 fatty acyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.50 E-value=3.1e-12 Score=113.86 Aligned_cols=205 Identities=13% Similarity=0.097 Sum_probs=132.5
Q ss_pred CCCcEEEEecCCCchhHHHHHHHHHcCC---eEEEEeCCcch---HHHHHHHHH---------h-c--------CCCeeE
Q 025672 10 LKGKVALLTGGGSGIGFEISLQLGKHGA---AIAIMGRRKTV---LRSAVAALH---------S-L--------GIPAIG 65 (249)
Q Consensus 10 l~~k~~lItGa~~giG~~~a~~l~~~G~---~v~l~~r~~~~---~~~~~~~~~---------~-~--------~~~~~~ 65 (249)
+++|+++||||+|.||+.+++.|++.+. +|+++.|.... .+.+..++. . . ..++.+
T Consensus 9 ~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~ 88 (491)
T PLN02996 9 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTP 88 (491)
T ss_pred hCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEE
Confidence 7899999999999999999999998653 67888886542 122221210 0 0 157899
Q ss_pred EEccCCCH-------HHHHHHHHHHHHHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc
Q 025672 66 LEGDVRKR-------EDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKG 138 (249)
Q Consensus 66 ~~~Dl~~~-------~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 138 (249)
+.+|++++ +.++.+++ .+|+|||+|+..... ++....+++|+.|+.++++++...-
T Consensus 89 i~GDl~~~~LGLs~~~~~~~l~~-------~vD~ViH~AA~v~~~-------~~~~~~~~~Nv~gt~~ll~~a~~~~--- 151 (491)
T PLN02996 89 VPGDISYDDLGVKDSNLREEMWK-------EIDIVVNLAATTNFD-------ERYDVALGINTLGALNVLNFAKKCV--- 151 (491)
T ss_pred EecccCCcCCCCChHHHHHHHHh-------CCCEEEECccccCCc-------CCHHHHHHHHHHHHHHHHHHHHhcC---
Confidence 99999843 33444443 589999999965421 2457788999999999998876421
Q ss_pred CCCCCCCCCCceEEEeccccccccCc------------------------------------------------------
Q 025672 139 GRGQASSSSGGIIINISATLHYTATW------------------------------------------------------ 164 (249)
Q Consensus 139 ~~~~~~~~~~g~iv~iss~~~~~~~~------------------------------------------------------ 164 (249)
.. .++|++||...+....
T Consensus 152 ~~--------k~~V~vST~~vyG~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (491)
T PLN02996 152 KV--------KMLLHVSTAYVCGEKSGLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLG 223 (491)
T ss_pred CC--------CeEEEEeeeEEecCCCceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhc
Confidence 11 4588888865432100
Q ss_pred --------cchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCC-------ChHHHHHhhhhhhc---
Q 025672 165 --------YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL-------APEEIRSKATDYMA--- 226 (249)
Q Consensus 165 --------~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~-------~~~~~~~~~~~~~~--- 226 (249)
....|+.||+..+.+++.. . . ++.+..+.|+.|..+...... .+..+.........
T Consensus 224 ~~~~~~~~~pn~Y~~TK~~aE~lv~~~----~-~-~lpv~i~RP~~V~G~~~~p~~gwi~~~~~~~~i~~~~~~g~~~~~ 297 (491)
T PLN02996 224 MERAKLHGWPNTYVFTKAMGEMLLGNF----K-E-NLPLVIIRPTMITSTYKEPFPGWIEGLRTIDSVIVGYGKGKLTCF 297 (491)
T ss_pred hhHHHhCCCCCchHhhHHHHHHHHHHh----c-C-CCCEEEECCCEeccCCcCCCCCcccchhhHHHHHHHhccceEeEE
Confidence 1124999999999888543 2 3 799999999999765321110 01122111111111
Q ss_pred ------ccCCCCHHHHHHHHHHhcc
Q 025672 227 ------AYKFGEKWDIAMAALYLAS 245 (249)
Q Consensus 227 ------~~~~~~~~dva~~v~~l~s 245 (249)
..-+...+|++++++.++.
T Consensus 298 ~gdg~~~~D~v~Vddvv~a~l~a~~ 322 (491)
T PLN02996 298 LADPNSVLDVIPADMVVNAMIVAMA 322 (491)
T ss_pred ecCCCeecceecccHHHHHHHHHHH
Confidence 1224567999999887764
|
|
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=3.6e-12 Score=117.80 Aligned_cols=162 Identities=17% Similarity=0.130 Sum_probs=112.2
Q ss_pred EEEEecCCCchhHHHHHHHH--HcCCeEEEEeCCcchHHHHHHHHHhcC-CCeeEEEccCCCHHHH--HHHHHHHHHHhC
Q 025672 14 VALLTGGGSGIGFEISLQLG--KHGAAIAIMGRRKTVLRSAVAALHSLG-IPAIGLEGDVRKREDA--VRVVESTINHFG 88 (249)
Q Consensus 14 ~~lItGa~~giG~~~a~~l~--~~G~~v~l~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~--~~~~~~~~~~~~ 88 (249)
++|||||+|.||++++++|+ ..|++|++++|+... +.........+ .++.++.+|++|++.. ...++++ .
T Consensus 2 ~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~-~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l----~ 76 (657)
T PRK07201 2 RYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSL-SRLEALAAYWGADRVVPLVGDLTEPGLGLSEADIAEL----G 76 (657)
T ss_pred eEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchH-HHHHHHHHhcCCCcEEEEecccCCccCCcCHHHHHHh----c
Confidence 69999999999999999999 589999999996532 22222222222 5689999999995310 1111222 4
Q ss_pred CccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC-----
Q 025672 89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT----- 163 (249)
Q Consensus 89 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~----- 163 (249)
.+|+|||+|+..... . ......++|+.++.++++++... +. .++|++||...+...
T Consensus 77 ~~D~Vih~Aa~~~~~----~---~~~~~~~~nv~gt~~ll~~a~~~----~~--------~~~v~~SS~~v~g~~~~~~~ 137 (657)
T PRK07201 77 DIDHVVHLAAIYDLT----A---DEEAQRAANVDGTRNVVELAERL----QA--------ATFHHVSSIAVAGDYEGVFR 137 (657)
T ss_pred CCCEEEECceeecCC----C---CHHHHHHHHhHHHHHHHHHHHhc----CC--------CeEEEEeccccccCccCccc
Confidence 699999999964321 1 23456789999999998876532 11 569999987543211
Q ss_pred --------ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccc
Q 025672 164 --------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDT 206 (249)
Q Consensus 164 --------~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~ 206 (249)
.....|+.+|...+.+++. ..|+++..+.|+.+..+
T Consensus 138 e~~~~~~~~~~~~Y~~sK~~~E~~~~~-------~~g~~~~ilRp~~v~G~ 181 (657)
T PRK07201 138 EDDFDEGQGLPTPYHRTKFEAEKLVRE-------ECGLPWRVYRPAVVVGD 181 (657)
T ss_pred cccchhhcCCCCchHHHHHHHHHHHHH-------cCCCcEEEEcCCeeeec
Confidence 1234699999999988752 23799999999999854
|
|
| >KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.48 E-value=1.8e-11 Score=90.25 Aligned_cols=186 Identities=18% Similarity=0.102 Sum_probs=135.3
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhC--
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG-- 88 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~-- 88 (249)
+.++|+|-||-+.+|.++..+|..+++-|.-++..+.+ + .+.-.++..|-+=.+.-+.+++++.+.++
T Consensus 2 sagrVivYGGkGALGSacv~~FkannywV~siDl~eNe---------~-Ad~sI~V~~~~swtEQe~~v~~~vg~sL~ge 71 (236)
T KOG4022|consen 2 SAGRVIVYGGKGALGSACVEFFKANNYWVLSIDLSENE---------Q-ADSSILVDGNKSWTEQEQSVLEQVGSSLQGE 71 (236)
T ss_pred CCceEEEEcCcchHhHHHHHHHHhcCeEEEEEeecccc---------c-ccceEEecCCcchhHHHHHHHHHHHHhhccc
Confidence 45778999999999999999999999988887765542 1 12234555666656777788888877653
Q ss_pred CccEEEEcCCCCCCCCCCCCCH-HHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch
Q 025672 89 KLDILVNAAAGNFLVPAEDLSP-NGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 167 (249)
Q Consensus 89 ~id~vi~~ag~~~~~~~~~~~~-~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~ 167 (249)
++|.|++-||.+.-+.-...+. ..-+-+++..++....-.+.....++. +|.+...+...+..+.|+..
T Consensus 72 kvDav~CVAGGWAGGnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HLK~----------GGLL~LtGAkaAl~gTPgMI 141 (236)
T KOG4022|consen 72 KVDAVFCVAGGWAGGNAKSKDLVKNADLMWKQSVWTSAISAKLATTHLKP----------GGLLQLTGAKAALGGTPGMI 141 (236)
T ss_pred ccceEEEeeccccCCCcchhhhhhchhhHHHHHHHHHHHHHHHHHhccCC----------CceeeecccccccCCCCccc
Confidence 7999999998765433221111 233445556666655555555555443 36677778888889999999
Q ss_pred hhHHHHHHHHHHHHHHHHHhc-CCCCeEEEEEecCccccccccCCCChHH
Q 025672 168 HVSAAKAAVDSITRSLALEWG-TDYAIRVNGIAPGPIKDTAGVSKLAPEE 216 (249)
Q Consensus 168 ~y~~sK~a~~~l~~~la~e~~-~~~gi~v~~v~pG~v~t~~~~~~~~~~~ 216 (249)
.|+++|+|+++|+++|+.+-. -+.|--+.+|.|=..+|||.+++++..+
T Consensus 142 GYGMAKaAVHqLt~SLaak~SGlP~gsaa~~ilPVTLDTPMNRKwMP~AD 191 (236)
T KOG4022|consen 142 GYGMAKAAVHQLTSSLAAKDSGLPDGSAALTILPVTLDTPMNRKWMPNAD 191 (236)
T ss_pred chhHHHHHHHHHHHHhcccccCCCCCceeEEEeeeeccCccccccCCCCc
Confidence 999999999999999998733 2457788899999999999888876543
|
|
| >PLN02778 3,5-epimerase/4-reductase | Back alignment and domain information |
|---|
Probab=99.47 E-value=3.7e-12 Score=106.58 Aligned_cols=188 Identities=15% Similarity=0.103 Sum_probs=114.6
Q ss_pred CCCCCCCCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHH
Q 025672 1 MESPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVV 80 (249)
Q Consensus 1 ~~~~~~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~ 80 (249)
|+++..... +++|||||+|.||++++++|.++|++|+... .|+.|.+.+...+
T Consensus 1 ~~~~~~~~~---~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~------------------------~~~~~~~~v~~~l 53 (298)
T PLN02778 1 SNGTAGSAT---LKFLIYGKTGWIGGLLGKLCQEQGIDFHYGS------------------------GRLENRASLEADI 53 (298)
T ss_pred CCCCCCCCC---CeEEEECCCCHHHHHHHHHHHhCCCEEEEec------------------------CccCCHHHHHHHH
Confidence 444444433 6799999999999999999999999987532 2455555555555
Q ss_pred HHHHHHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccc--
Q 025672 81 ESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL-- 158 (249)
Q Consensus 81 ~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~-- 158 (249)
+.. ++|+|||+||....... +...++....+++|+.++.++++++...- -+.+++||..
T Consensus 54 ~~~-----~~D~ViH~Aa~~~~~~~-~~~~~~p~~~~~~Nv~gt~~ll~aa~~~g-------------v~~v~~sS~~vy 114 (298)
T PLN02778 54 DAV-----KPTHVFNAAGVTGRPNV-DWCESHKVETIRANVVGTLTLADVCRERG-------------LVLTNYATGCIF 114 (298)
T ss_pred Hhc-----CCCEEEECCcccCCCCc-hhhhhCHHHHHHHHHHHHHHHHHHHHHhC-------------CCEEEEecceEe
Confidence 432 68999999997643211 11223456789999999999999986431 1244444321
Q ss_pred ccc----------------cCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhh
Q 025672 159 HYT----------------ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKAT 222 (249)
Q Consensus 159 ~~~----------------~~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~ 222 (249)
+.. +.+....|+.+|.+.+.+++..+. ..++|+ ++...+.. .....+...+.
T Consensus 115 ~~~~~~p~~~~~~~~Ee~~p~~~~s~Yg~sK~~~E~~~~~y~~----~~~lr~-----~~~~~~~~---~~~~~fi~~~~ 182 (298)
T PLN02778 115 EYDDAHPLGSGIGFKEEDTPNFTGSFYSKTKAMVEELLKNYEN----VCTLRV-----RMPISSDL---SNPRNFITKIT 182 (298)
T ss_pred CCCCCCCcccCCCCCcCCCCCCCCCchHHHHHHHHHHHHHhhc----cEEeee-----cccCCccc---ccHHHHHHHHH
Confidence 110 111235799999999999987653 234555 22111100 01112333332
Q ss_pred hhh---cccC-CCCHHHHHHHHHHhccC
Q 025672 223 DYM---AAYK-FGEKWDIAMAALYLASD 246 (249)
Q Consensus 223 ~~~---~~~~-~~~~~dva~~v~~l~s~ 246 (249)
... ...+ +...+|++++++.++..
T Consensus 183 ~~~~~~~~~~s~~yv~D~v~al~~~l~~ 210 (298)
T PLN02778 183 RYEKVVNIPNSMTILDELLPISIEMAKR 210 (298)
T ss_pred cCCCeeEcCCCCEEHHHHHHHHHHHHhC
Confidence 221 1222 56789999999988753
|
|
| >PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1 | Back alignment and domain information |
|---|
Probab=99.47 E-value=1.3e-12 Score=108.77 Aligned_cols=180 Identities=15% Similarity=0.091 Sum_probs=119.9
Q ss_pred cEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCccE
Q 025672 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI 92 (249)
Q Consensus 13 k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ 92 (249)
.++||||++|-||.++.+.|.++|++|+.++|+ .+|++|.+++.+++++. ++|+
T Consensus 1 MriLI~GasG~lG~~l~~~l~~~~~~v~~~~r~---------------------~~dl~d~~~~~~~~~~~-----~pd~ 54 (286)
T PF04321_consen 1 MRILITGASGFLGSALARALKERGYEVIATSRS---------------------DLDLTDPEAVAKLLEAF-----KPDV 54 (286)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTTSEEEEEESTT---------------------CS-TTSHHHHHHHHHHH-------SE
T ss_pred CEEEEECCCCHHHHHHHHHHhhCCCEEEEeCch---------------------hcCCCCHHHHHHHHHHh-----CCCe
Confidence 368999999999999999999999999999876 46999999999999876 6999
Q ss_pred EEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC---------
Q 025672 93 LVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT--------- 163 (249)
Q Consensus 93 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~--------- 163 (249)
|||+|+..... .-.++-+..+.+|+.++.++++.+... +.++|++||..-+.+.
T Consensus 55 Vin~aa~~~~~----~ce~~p~~a~~iN~~~~~~la~~~~~~-------------~~~li~~STd~VFdG~~~~~y~E~d 117 (286)
T PF04321_consen 55 VINCAAYTNVD----ACEKNPEEAYAINVDATKNLAEACKER-------------GARLIHISTDYVFDGDKGGPYTEDD 117 (286)
T ss_dssp EEE------HH----HHHHSHHHHHHHHTHHHHHHHHHHHHC-------------T-EEEEEEEGGGS-SSTSSSB-TTS
T ss_pred EeccceeecHH----hhhhChhhhHHHhhHHHHHHHHHHHHc-------------CCcEEEeeccEEEcCCcccccccCC
Confidence 99999964211 112345678899999999999888632 3679999997543322
Q ss_pred --ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcc-------cCCCCHH
Q 025672 164 --WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAA-------YKFGEKW 234 (249)
Q Consensus 164 --~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~ 234 (249)
.+...|+.+|...+..++... + ....+.++++..+ ........+.+.+....++ ......+
T Consensus 118 ~~~P~~~YG~~K~~~E~~v~~~~-----~---~~~IlR~~~~~g~--~~~~~~~~~~~~~~~~~~i~~~~d~~~~p~~~~ 187 (286)
T PF04321_consen 118 PPNPLNVYGRSKLEGEQAVRAAC-----P---NALILRTSWVYGP--SGRNFLRWLLRRLRQGEPIKLFDDQYRSPTYVD 187 (286)
T ss_dssp ----SSHHHHHHHHHHHHHHHH------S---SEEEEEE-SEESS--SSSSHHHHHHHHHHCTSEEEEESSCEE--EEHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHhc-----C---CEEEEecceeccc--CCCchhhhHHHHHhcCCeeEeeCCceeCCEEHH
Confidence 235679999999888887622 2 5567788888754 1122233344433332211 1234678
Q ss_pred HHHHHHHHhcc
Q 025672 235 DIAMAALYLAS 245 (249)
Q Consensus 235 dva~~v~~l~s 245 (249)
|+|+.+..|+.
T Consensus 188 dlA~~i~~l~~ 198 (286)
T PF04321_consen 188 DLARVILELIE 198 (286)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999998874
|
1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. |
| >PRK05865 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.47 E-value=2.1e-12 Score=120.07 Aligned_cols=163 Identities=14% Similarity=0.076 Sum_probs=117.3
Q ss_pred EEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCccEE
Q 025672 14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDIL 93 (249)
Q Consensus 14 ~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~v 93 (249)
+++||||+|+||++++++|+++|++|++++|+.... . ...+.++.+|++|.+++.++++ .+|+|
T Consensus 2 kILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~------~---~~~v~~v~gDL~D~~~l~~al~-------~vD~V 65 (854)
T PRK05865 2 RIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDS------W---PSSADFIAADIRDATAVESAMT-------GADVV 65 (854)
T ss_pred EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhh------c---ccCceEEEeeCCCHHHHHHHHh-------CCCEE
Confidence 689999999999999999999999999999875321 1 1257889999999999888775 48999
Q ss_pred EEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhhHHHH
Q 025672 94 VNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAK 173 (249)
Q Consensus 94 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~~sK 173 (249)
||+|+.... .+++|+.++.++++++. +.+. ++||++||.. |
T Consensus 66 VHlAa~~~~-------------~~~vNv~GT~nLLeAa~----~~gv--------kr~V~iSS~~--------------K 106 (854)
T PRK05865 66 AHCAWVRGR-------------NDHINIDGTANVLKAMA----ETGT--------GRIVFTSSGH--------------Q 106 (854)
T ss_pred EECCCcccc-------------hHHHHHHHHHHHHHHHH----HcCC--------CeEEEECCcH--------------H
Confidence 999975321 35789999888876654 3322 5799999953 6
Q ss_pred HHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhh--hhccc------CCCCHHHHHHHHHHhcc
Q 025672 174 AAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATD--YMAAY------KFGEKWDIAMAALYLAS 245 (249)
Q Consensus 174 ~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~--~~~~~------~~~~~~dva~~v~~l~s 245 (249)
.+.+.+.+ .+|+.+..+.|+.+..+.. ..+...+.. ..+.+ .+...+|+++++..++.
T Consensus 107 ~aaE~ll~--------~~gl~~vILRp~~VYGP~~------~~~i~~ll~~~v~~~G~~~~~~dfIhVdDVA~Ai~~aL~ 172 (854)
T PRK05865 107 PRVEQMLA--------DCGLEWVAVRCALIFGRNV------DNWVQRLFALPVLPAGYADRVVQVVHSDDAQRLLVRALL 172 (854)
T ss_pred HHHHHHHH--------HcCCCEEEEEeceEeCCCh------HHHHHHHhcCceeccCCCCceEeeeeHHHHHHHHHHHHh
Confidence 66665442 3479999999999986531 111211111 11111 25678999999998874
|
|
| >COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.45 E-value=6.1e-12 Score=102.39 Aligned_cols=179 Identities=17% Similarity=0.144 Sum_probs=128.3
Q ss_pred EEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCccEEE
Q 025672 15 ALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILV 94 (249)
Q Consensus 15 ~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi 94 (249)
+||||++|-+|.++++.|. .+++|+.++|.. +|++|.+.+.+++.+. ++|+||
T Consensus 3 iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~---------------------~Ditd~~~v~~~i~~~-----~PDvVI 55 (281)
T COG1091 3 ILITGANGQLGTELRRALP-GEFEVIATDRAE---------------------LDITDPDAVLEVIRET-----RPDVVI 55 (281)
T ss_pred EEEEcCCChHHHHHHHHhC-CCceEEeccCcc---------------------ccccChHHHHHHHHhh-----CCCEEE
Confidence 8999999999999999999 778899988765 6999999999999986 799999
Q ss_pred EcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC-----------
Q 025672 95 NAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT----------- 163 (249)
Q Consensus 95 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~----------- 163 (249)
|+|++.-... -+.+-+..+.+|..++.++++++... +..+|++|+-.-+.+.
T Consensus 56 n~AAyt~vD~----aE~~~e~A~~vNa~~~~~lA~aa~~~-------------ga~lVhiSTDyVFDG~~~~~Y~E~D~~ 118 (281)
T COG1091 56 NAAAYTAVDK----AESEPELAFAVNATGAENLARAAAEV-------------GARLVHISTDYVFDGEKGGPYKETDTP 118 (281)
T ss_pred ECcccccccc----ccCCHHHHHHhHHHHHHHHHHHHHHh-------------CCeEEEeecceEecCCCCCCCCCCCCC
Confidence 9999754321 22335788999999999999999754 3669999986543322
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhh-------cccCCCCHHHH
Q 025672 164 WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYM-------AAYKFGEKWDI 236 (249)
Q Consensus 164 ~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~dv 236 (249)
.+...|+.||.+.+..++... + +...|..+|+..... ......+.+...+.. ..+.....+|+
T Consensus 119 ~P~nvYG~sKl~GE~~v~~~~-----~---~~~I~Rtswv~g~~g--~nFv~tml~la~~~~~l~vv~Dq~gsPt~~~dl 188 (281)
T COG1091 119 NPLNVYGRSKLAGEEAVRAAG-----P---RHLILRTSWVYGEYG--NNFVKTMLRLAKEGKELKVVDDQYGSPTYTEDL 188 (281)
T ss_pred CChhhhhHHHHHHHHHHHHhC-----C---CEEEEEeeeeecCCC--CCHHHHHHHHhhcCCceEEECCeeeCCccHHHH
Confidence 345689999999988886654 2 233445555653322 112223333332221 23345678999
Q ss_pred HHHHHHhccCC
Q 025672 237 AMAALYLASDA 247 (249)
Q Consensus 237 a~~v~~l~s~~ 247 (249)
|+++..|+...
T Consensus 189 A~~i~~ll~~~ 199 (281)
T COG1091 189 ADAILELLEKE 199 (281)
T ss_pred HHHHHHHHhcc
Confidence 99999877543
|
|
| >PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila | Back alignment and domain information |
|---|
Probab=99.45 E-value=2.8e-12 Score=104.60 Aligned_cols=159 Identities=19% Similarity=0.166 Sum_probs=99.6
Q ss_pred EecCCCchhHHHHHHHHHcCC--eEEEEeCCcch---HHHHHHHHHh----------cCCCeeEEEccCCCHH------H
Q 025672 17 LTGGGSGIGFEISLQLGKHGA--AIAIMGRRKTV---LRSAVAALHS----------LGIPAIGLEGDVRKRE------D 75 (249)
Q Consensus 17 ItGa~~giG~~~a~~l~~~G~--~v~l~~r~~~~---~~~~~~~~~~----------~~~~~~~~~~Dl~~~~------~ 75 (249)
||||||.||..+..+|++++. +|+++.|..+. .+++.+.+.. ...+++++.+|++++. +
T Consensus 1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~ 80 (249)
T PF07993_consen 1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED 80 (249)
T ss_dssp EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence 799999999999999999987 89999997643 2333222211 2578999999999864 3
Q ss_pred HHHHHHHHHHHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEec
Q 025672 76 AVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINIS 155 (249)
Q Consensus 76 ~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~is 155 (249)
.+.+.+ .+|+|||||+...... .+....++|+.|+.++++.+... . ..+++++|
T Consensus 81 ~~~L~~-------~v~~IiH~Aa~v~~~~-------~~~~~~~~NV~gt~~ll~la~~~----~--------~~~~~~iS 134 (249)
T PF07993_consen 81 YQELAE-------EVDVIIHCAASVNFNA-------PYSELRAVNVDGTRNLLRLAAQG----K--------RKRFHYIS 134 (249)
T ss_dssp HHHHHH-------H--EEEE--SS-SBS--------S--EEHHHHHHHHHHHHHHHTSS----S-----------EEEEE
T ss_pred hhcccc-------ccceeeecchhhhhcc-------cchhhhhhHHHHHHHHHHHHHhc----c--------CcceEEec
Confidence 444433 4899999999654221 34557789999999999888621 1 13599999
Q ss_pred ccccc--cc------------------CccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccc
Q 025672 156 ATLHY--TA------------------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKD 205 (249)
Q Consensus 156 s~~~~--~~------------------~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t 205 (249)
|.... .. ......|..||..-+.+++..+.+. |+.+..+.||.|-.
T Consensus 135 Ta~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gY~~SK~~aE~~l~~a~~~~----g~p~~I~Rp~~i~g 200 (249)
T PF07993_consen 135 TAYVAGSRPGTIEEKVYPEEEDDLDPPQGFPNGYEQSKWVAERLLREAAQRH----GLPVTIYRPGIIVG 200 (249)
T ss_dssp EGGGTTS-TTT--SSS-HHH--EEE--TTSEE-HHHHHHHHHHHHHHHHHHH-------EEEEEE-EEE-
T ss_pred cccccCCCCCcccccccccccccchhhccCCccHHHHHHHHHHHHHHHHhcC----CceEEEEecCcccc
Confidence 93211 00 0123479999999999999888653 58999999999975
|
A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A. |
| >COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.42 E-value=1.4e-12 Score=104.33 Aligned_cols=215 Identities=20% Similarity=0.149 Sum_probs=148.7
Q ss_pred CcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchH--HHH--HHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVL--RSA--VAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 12 ~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~--~~~--~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
+|++||||-+|--|.-+|+.|+++|+.|..+.|+.... ... .+.-...+.+++++.+|++|..++-++++.+
T Consensus 2 ~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v---- 77 (345)
T COG1089 2 GKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEV---- 77 (345)
T ss_pred CceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhc----
Confidence 69999999999999999999999999999998874422 211 1111122456899999999999999999987
Q ss_pred CCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccc-------
Q 025672 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY------- 160 (249)
Q Consensus 88 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~------- 160 (249)
.+|-|+|-++..+.+ .+.++.+.+.+++.+|+++|+.++.-+-.+. -++..-||..-+
T Consensus 78 -~PdEIYNLaAQS~V~----vSFe~P~~T~~~~~iGtlrlLEaiR~~~~~~----------~rfYQAStSE~fG~v~~~p 142 (345)
T COG1089 78 -QPDEIYNLAAQSHVG----VSFEQPEYTADVDAIGTLRLLEAIRILGEKK----------TRFYQASTSELYGLVQEIP 142 (345)
T ss_pred -Cchhheecccccccc----ccccCcceeeeechhHHHHHHHHHHHhCCcc----------cEEEecccHHhhcCcccCc
Confidence 799999999876543 4555667889999999999999886543211 446666654322
Q ss_pred ----ccCccchhhHHHHHHHHHHHHHHHHHhc--CCCCeEEEEEecCccccccccCCCChH---HHHHh------hhhhh
Q 025672 161 ----TATWYQIHVSAAKAAVDSITRSLALEWG--TDYAIRVNGIAPGPIKDTAGVSKLAPE---EIRSK------ATDYM 225 (249)
Q Consensus 161 ----~~~~~~~~y~~sK~a~~~l~~~la~e~~--~~~gi~v~~v~pG~v~t~~~~~~~~~~---~~~~~------~~~~~ 225 (249)
.|..+.++|+++|....+++...+..|+ --.||-+|.=+|.-= +.+....... ..... +.+.-
T Consensus 143 q~E~TPFyPrSPYAvAKlYa~W~tvNYResYgl~AcnGILFNHESP~Rg--e~FVTRKIt~ava~Ik~G~q~~l~lGNld 220 (345)
T COG1089 143 QKETTPFYPRSPYAVAKLYAYWITVNYRESYGLFACNGILFNHESPLRG--ETFVTRKITRAVARIKLGLQDKLYLGNLD 220 (345)
T ss_pred cccCCCCCCCCHHHHHHHHHHheeeehHhhcCceeecceeecCCCCCCc--cceehHHHHHHHHHHHccccceEEecccc
Confidence 2445778999999999999988887654 134666665555322 2221111111 11111 12223
Q ss_pred cccCCCCHHHHHHHHHHhccCC
Q 025672 226 AAYKFGEKWDIAMAALYLASDA 247 (249)
Q Consensus 226 ~~~~~~~~~dva~~v~~l~s~~ 247 (249)
..+-|+.+.|.+++.+.+++.+
T Consensus 221 AkRDWG~A~DYVe~mwlmLQq~ 242 (345)
T COG1089 221 AKRDWGHAKDYVEAMWLMLQQE 242 (345)
T ss_pred ccccccchHHHHHHHHHHHccC
Confidence 3455889999999999888653
|
|
| >KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.37 E-value=1.1e-11 Score=104.37 Aligned_cols=168 Identities=14% Similarity=0.083 Sum_probs=123.6
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcC--CeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhC
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHG--AAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G--~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 88 (249)
++.+++||||+|.+|++++.+|.+++ .++.++|.....-.-..++......++.++++|+.|..++.+++.
T Consensus 3 ~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~~~~~v~~~~~D~~~~~~i~~a~~------- 75 (361)
T KOG1430|consen 3 KKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGFRSGRVTVILGDLLDANSISNAFQ------- 75 (361)
T ss_pred cCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcccCCceeEEecchhhhhhhhhhcc-------
Confidence 67899999999999999999999999 689999887642222222222135678999999999999888876
Q ss_pred CccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc-------
Q 025672 89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT------- 161 (249)
Q Consensus 89 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~------- 161 (249)
.. .|||+|+...+ +.-..+-+..+++|+.|+.+++.++...-. .++|++||..-..
T Consensus 76 ~~-~Vvh~aa~~~~----~~~~~~~~~~~~vNV~gT~nvi~~c~~~~v------------~~lIYtSs~~Vvf~g~~~~n 138 (361)
T KOG1430|consen 76 GA-VVVHCAASPVP----DFVENDRDLAMRVNVNGTLNVIEACKELGV------------KRLIYTSSAYVVFGGEPIIN 138 (361)
T ss_pred Cc-eEEEeccccCc----cccccchhhheeecchhHHHHHHHHHHhCC------------CEEEEecCceEEeCCeeccc
Confidence 35 77777764332 222334677889999999999888875533 4488888875332
Q ss_pred -----cCc--cchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccc
Q 025672 162 -----ATW--YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDT 206 (249)
Q Consensus 162 -----~~~--~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~ 206 (249)
+.| ....|+.||+-.+.+++.... ..+....++.|-.|..|
T Consensus 139 ~~E~~p~p~~~~d~Y~~sKa~aE~~Vl~an~----~~~l~T~aLR~~~IYGp 186 (361)
T KOG1430|consen 139 GDESLPYPLKHIDPYGESKALAEKLVLEANG----SDDLYTCALRPPGIYGP 186 (361)
T ss_pred CCCCCCCccccccccchHHHHHHHHHHHhcC----CCCeeEEEEccccccCC
Confidence 222 235899999999888876662 45688999999999855
|
|
| >PRK08309 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.36 E-value=1.3e-10 Score=89.57 Aligned_cols=85 Identities=24% Similarity=0.282 Sum_probs=73.1
Q ss_pred cEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCccE
Q 025672 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI 92 (249)
Q Consensus 13 k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ 92 (249)
++++||||+ |+|.++++.|+++|++|++++|+.+..+.+...+.. ..++.++.+|++|++++.++++.+.+.++++|+
T Consensus 1 m~vlVtGGt-G~gg~la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~-~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id~ 78 (177)
T PRK08309 1 MHALVIGGT-GMLKRVSLWLCEKGFHVSVIARREVKLENVKRESTT-PESITPLPLDYHDDDALKLAIKSTIEKNGPFDL 78 (177)
T ss_pred CEEEEECcC-HHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHhhc-CCcEEEEEccCCCHHHHHHHHHHHHHHcCCCeE
Confidence 368999998 677789999999999999999998877776665543 457889999999999999999999998999999
Q ss_pred EEEcCCC
Q 025672 93 LVNAAAG 99 (249)
Q Consensus 93 vi~~ag~ 99 (249)
+|+....
T Consensus 79 lv~~vh~ 85 (177)
T PRK08309 79 AVAWIHS 85 (177)
T ss_pred EEEeccc
Confidence 9987763
|
|
| >TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=99.34 E-value=1.2e-10 Score=116.01 Aligned_cols=203 Identities=13% Similarity=0.080 Sum_probs=132.4
Q ss_pred CcEEEEecCCCchhHHHHHHHHHcC----CeEEEEeCCcchHH---HHHHHHHhc-------CCCeeEEEccCCCH----
Q 025672 12 GKVALLTGGGSGIGFEISLQLGKHG----AAIAIMGRRKTVLR---SAVAALHSL-------GIPAIGLEGDVRKR---- 73 (249)
Q Consensus 12 ~k~~lItGa~~giG~~~a~~l~~~G----~~v~l~~r~~~~~~---~~~~~~~~~-------~~~~~~~~~Dl~~~---- 73 (249)
.++++|||++|.||.+++.+|+++| .+|+.+.|+..... .+.+.+..+ ..++.++.+|++++
T Consensus 971 ~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lgl 1050 (1389)
T TIGR03443 971 PITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFGL 1050 (1389)
T ss_pred CceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCCc
Confidence 5899999999999999999999987 68888888754322 222222221 13688999999865
Q ss_pred --HHHHHHHHHHHHHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceE
Q 025672 74 --EDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGII 151 (249)
Q Consensus 74 --~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~i 151 (249)
+..+.+. ..+|+|||+|+..... .. +......|+.|+.++++.+... + ..++
T Consensus 1051 ~~~~~~~l~-------~~~d~iiH~Aa~~~~~----~~---~~~~~~~nv~gt~~ll~~a~~~----~--------~~~~ 1104 (1389)
T TIGR03443 1051 SDEKWSDLT-------NEVDVIIHNGALVHWV----YP---YSKLRDANVIGTINVLNLCAEG----K--------AKQF 1104 (1389)
T ss_pred CHHHHHHHH-------hcCCEEEECCcEecCc----cC---HHHHHHhHHHHHHHHHHHHHhC----C--------CceE
Confidence 2222222 3689999999965311 12 3344568999999999877532 1 1459
Q ss_pred EEecccccccc-----------------C-----------ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcc
Q 025672 152 INISATLHYTA-----------------T-----------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPI 203 (249)
Q Consensus 152 v~iss~~~~~~-----------------~-----------~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v 203 (249)
+++||...+.. . .....|+.||.+.+.+++..+ ..|++++.+.||.|
T Consensus 1105 v~vSS~~v~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~-----~~g~~~~i~Rpg~v 1179 (1389)
T TIGR03443 1105 SFVSSTSALDTEYYVNLSDELVQAGGAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAG-----KRGLRGCIVRPGYV 1179 (1389)
T ss_pred EEEeCeeecCcccccchhhhhhhccCCCCCcccccccccccCCCChHHHHHHHHHHHHHHH-----hCCCCEEEECCCcc
Confidence 99999644311 0 012359999999998887643 34899999999999
Q ss_pred ccccccCCCChHHHHHhhh-hh-----hcc----cCCCCHHHHHHHHHHhcc
Q 025672 204 KDTAGVSKLAPEEIRSKAT-DY-----MAA----YKFGEKWDIAMAALYLAS 245 (249)
Q Consensus 204 ~t~~~~~~~~~~~~~~~~~-~~-----~~~----~~~~~~~dva~~v~~l~s 245 (249)
..+.........++...+. .. .|. .-+...++++++++.++.
T Consensus 1180 ~G~~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~Vddva~ai~~~~~ 1231 (1389)
T TIGR03443 1180 TGDSKTGATNTDDFLLRMLKGCIQLGLIPNINNTVNMVPVDHVARVVVAAAL 1231 (1389)
T ss_pred ccCCCcCCCCchhHHHHHHHHHHHhCCcCCCCCccccccHHHHHHHHHHHHh
Confidence 7553332222222222221 11 121 224568999999988874
|
Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal. |
| >COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.33 E-value=6.7e-11 Score=98.84 Aligned_cols=164 Identities=17% Similarity=0.130 Sum_probs=117.6
Q ss_pred cEEEEecCCCchhHHHHHHHHHcC-CeEEEEeCCcc---hHHHHHHHHH-------hcCCCeeEEEccCCCH------HH
Q 025672 13 KVALLTGGGSGIGFEISLQLGKHG-AAIAIMGRRKT---VLRSAVAALH-------SLGIPAIGLEGDVRKR------ED 75 (249)
Q Consensus 13 k~~lItGa~~giG~~~a~~l~~~G-~~v~l~~r~~~---~~~~~~~~~~-------~~~~~~~~~~~Dl~~~------~~ 75 (249)
+++++|||||.+|..+..+|+.+- ++|+..-|-.+ ..+++.+.+. ....++..+..|++.+ ..
T Consensus 1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~ 80 (382)
T COG3320 1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERT 80 (382)
T ss_pred CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHH
Confidence 579999999999999999988765 48998887544 2344444443 2356899999999944 44
Q ss_pred HHHHHHHHHHHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEec
Q 025672 76 AVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINIS 155 (249)
Q Consensus 76 ~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~is 155 (249)
.+.+.+ .+|.||||++.... ...+.+....|+.|+..+++.+.-- |. -.+.++|
T Consensus 81 ~~~La~-------~vD~I~H~gA~Vn~-------v~pYs~L~~~NVlGT~evlrLa~~g--k~----------Kp~~yVS 134 (382)
T COG3320 81 WQELAE-------NVDLIIHNAALVNH-------VFPYSELRGANVLGTAEVLRLAATG--KP----------KPLHYVS 134 (382)
T ss_pred HHHHhh-------hcceEEecchhhcc-------cCcHHHhcCcchHhHHHHHHHHhcC--CC----------ceeEEEe
Confidence 555544 58999999996542 1124666789999999999887621 21 2288999
Q ss_pred cccccccC--------------------ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccccc
Q 025672 156 ATLHYTAT--------------------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTA 207 (249)
Q Consensus 156 s~~~~~~~--------------------~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~ 207 (249)
|++-.... .....|+-||.+.+-+++... +.|+++..+.||+|-.+.
T Consensus 135 sisv~~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~~SKwvaE~Lvr~A~-----~rGLpv~I~Rpg~I~gds 201 (382)
T COG3320 135 SISVGETEYYSNFTVDFDEISPTRNVGQGLAGGYGRSKWVAEKLVREAG-----DRGLPVTIFRPGYITGDS 201 (382)
T ss_pred eeeeccccccCCCccccccccccccccCccCCCcchhHHHHHHHHHHHh-----hcCCCeEEEecCeeeccC
Confidence 87643221 223579999999888887655 458999999999996443
|
|
| >TIGR01777 yfcH conserved hypothetical protein TIGR01777 | Back alignment and domain information |
|---|
Probab=99.32 E-value=1.1e-10 Score=97.14 Aligned_cols=194 Identities=14% Similarity=0.075 Sum_probs=110.0
Q ss_pred EEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCccEEE
Q 025672 15 ALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILV 94 (249)
Q Consensus 15 ~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi 94 (249)
+|||||+|.||.+++++|+++|++|++++|+........ . ..+ .|+.. .. ..+.+..+|+||
T Consensus 1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~----~~~--~~~~~-~~-------~~~~~~~~D~Vv 62 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTK----W----EGY--KPWAP-LA-------ESEALEGADAVI 62 (292)
T ss_pred CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCccc----c----eee--ecccc-cc-------hhhhcCCCCEEE
Confidence 589999999999999999999999999999876533211 0 011 12221 11 123345799999
Q ss_pred EcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC----------c
Q 025672 95 NAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT----------W 164 (249)
Q Consensus 95 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~----------~ 164 (249)
|+||..... ...+.+.....+++|+.+..++++++...-.+ ...+++.|+...+... +
T Consensus 63 h~a~~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~----------~~~~i~~S~~~~yg~~~~~~~~E~~~~ 130 (292)
T TIGR01777 63 NLAGEPIAD--KRWTEERKQEIRDSRIDTTRALVEAIAAAEQK----------PKVFISASAVGYYGTSEDRVFTEEDSP 130 (292)
T ss_pred ECCCCCccc--ccCCHHHHHHHHhcccHHHHHHHHHHHhcCCC----------ceEEEEeeeEEEeCCCCCCCcCcccCC
Confidence 999964321 11233455677889999988888887633110 0234444443211110 0
Q ss_pred -cchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHH---Hhhh-----hhhcccCCCCHHH
Q 025672 165 -YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIR---SKAT-----DYMAAYKFGEKWD 235 (249)
Q Consensus 165 -~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~---~~~~-----~~~~~~~~~~~~d 235 (249)
+...|+..+...+...+ .+. +.++.+..+.|+.+..+.. . .. ..+. .... ......-+...+|
T Consensus 131 ~~~~~~~~~~~~~e~~~~----~~~-~~~~~~~ilR~~~v~G~~~-~-~~-~~~~~~~~~~~~~~~g~~~~~~~~i~v~D 202 (292)
T TIGR01777 131 AGDDFLAELCRDWEEAAQ----AAE-DLGTRVVLLRTGIVLGPKG-G-AL-AKMLPPFRLGLGGPLGSGRQWFSWIHIED 202 (292)
T ss_pred CCCChHHHHHHHHHHHhh----hch-hcCCceEEEeeeeEECCCc-c-hh-HHHHHHHhcCcccccCCCCcccccEeHHH
Confidence 11122322322222222 222 4579999999999986531 1 11 1111 1111 0111123567899
Q ss_pred HHHHHHHhccC
Q 025672 236 IAMAALYLASD 246 (249)
Q Consensus 236 va~~v~~l~s~ 246 (249)
+++++.+++..
T Consensus 203 va~~i~~~l~~ 213 (292)
T TIGR01777 203 LVQLILFALEN 213 (292)
T ss_pred HHHHHHHHhcC
Confidence 99999999864
|
This model represents a clade of proteins of unknown function including the E. coli yfcH protein. |
| >KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.28 E-value=4.7e-11 Score=95.61 Aligned_cols=210 Identities=14% Similarity=0.079 Sum_probs=145.8
Q ss_pred CCCcEEEEecCCCchhHHHHHHHHHc--CCeEEEEeC---CcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHH
Q 025672 10 LKGKVALLTGGGSGIGFEISLQLGKH--GAAIAIMGR---RKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTI 84 (249)
Q Consensus 10 l~~k~~lItGa~~giG~~~a~~l~~~--G~~v~l~~r---~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 84 (249)
.+.|.++||||.|.||...+..+... .++.+.++. ... ....++.. -..+.++++.|+.+...+..++..
T Consensus 4 ~~~~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~--~~~l~~~~-n~p~ykfv~~di~~~~~~~~~~~~-- 78 (331)
T KOG0747|consen 4 YKEKNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSN--LKNLEPVR-NSPNYKFVEGDIADADLVLYLFET-- 78 (331)
T ss_pred CccceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccc--cchhhhhc-cCCCceEeeccccchHHHHhhhcc--
Confidence 34599999999999999999999875 345554432 111 22222222 135789999999999998888764
Q ss_pred HHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc--
Q 025672 85 NHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA-- 162 (249)
Q Consensus 85 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~-- 162 (249)
..+|.|+|-|+..+... +.-+-....+.|+++...|++........ .++|.+|+-.-+..
T Consensus 79 ---~~id~vihfaa~t~vd~----s~~~~~~~~~nnil~t~~Lle~~~~sg~i-----------~~fvhvSTdeVYGds~ 140 (331)
T KOG0747|consen 79 ---EEIDTVIHFAAQTHVDR----SFGDSFEFTKNNILSTHVLLEAVRVSGNI-----------RRFVHVSTDEVYGDSD 140 (331)
T ss_pred ---CchhhhhhhHhhhhhhh----hcCchHHHhcCCchhhhhHHHHHHhccCe-----------eEEEEecccceecCcc
Confidence 58999999998655321 22223456789999999999998866522 45899988643221
Q ss_pred ----------CccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhh--------
Q 025672 163 ----------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDY-------- 224 (249)
Q Consensus 163 ----------~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~-------- 224 (249)
..+...|+++|+|.+++++++.+.| |+.++.+.-+.|+.|........+.+.+.....
T Consensus 141 ~~~~~~E~s~~nPtnpyAasKaAaE~~v~Sy~~sy----~lpvv~~R~nnVYGP~q~~~klipkFi~l~~~~~~~~i~g~ 216 (331)
T KOG0747|consen 141 EDAVVGEASLLNPTNPYAASKAAAEMLVRSYGRSY----GLPVVTTRMNNVYGPNQYPEKLIPKFIKLAMRGKEYPIHGD 216 (331)
T ss_pred ccccccccccCCCCCchHHHHHHHHHHHHHHhhcc----CCcEEEEeccCccCCCcChHHHhHHHHHHHHhCCCcceecC
Confidence 1234579999999999999999765 599999999999987665544444444322111
Q ss_pred -hcccCCCCHHHHHHHHHHhccC
Q 025672 225 -MAAYKFGEKWDIAMAALYLASD 246 (249)
Q Consensus 225 -~~~~~~~~~~dva~~v~~l~s~ 246 (249)
...+.+...||+++++.-.+..
T Consensus 217 g~~~rs~l~veD~~ea~~~v~~K 239 (331)
T KOG0747|consen 217 GLQTRSYLYVEDVSEAFKAVLEK 239 (331)
T ss_pred cccceeeEeHHHHHHHHHHHHhc
Confidence 2223356789999998776644
|
|
| >COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.26 E-value=6.2e-11 Score=94.90 Aligned_cols=200 Identities=16% Similarity=0.219 Sum_probs=112.8
Q ss_pred EEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCccEEE
Q 025672 15 ALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILV 94 (249)
Q Consensus 15 ~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi 94 (249)
++||||||.||++++.+|.+.|++|+++.|+..+.+... .. .+...+.+....+ .++|+||
T Consensus 1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~----------~~---~v~~~~~~~~~~~------~~~DavI 61 (297)
T COG1090 1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNL----------HP---NVTLWEGLADALT------LGIDAVI 61 (297)
T ss_pred CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhc----------Cc---cccccchhhhccc------CCCCEEE
Confidence 589999999999999999999999999999987544311 11 1112222222221 1699999
Q ss_pred EcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhhHHHHH
Q 025672 95 NAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKA 174 (249)
Q Consensus 95 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~~sK~ 174 (249)
|-||-.-... ..+.+.=+.. ..+-+..++.+.....+... ..++..=+|..++++......|.-...
T Consensus 62 NLAG~~I~~r--rWt~~~K~~i----~~SRi~~T~~L~e~I~~~~~-------~P~~~isaSAvGyYG~~~~~~~tE~~~ 128 (297)
T COG1090 62 NLAGEPIAER--RWTEKQKEEI----RQSRINTTEKLVELIAASET-------KPKVLISASAVGYYGHSGDRVVTEESP 128 (297)
T ss_pred ECCCCccccc--cCCHHHHHHH----HHHHhHHHHHHHHHHHhccC-------CCcEEEecceEEEecCCCceeeecCCC
Confidence 9999643221 0222222333 34455555555555543222 244555566677776544333322222
Q ss_pred HHHHHHHHHHHHhc------CCCCeEEEEEecCccccccc--cCCCChHHHHHhhhhhhc----ccCCCCHHHHHHHHHH
Q 025672 175 AVDSITRSLALEWG------TDYAIRVNGIAPGPIKDTAG--VSKLAPEEIRSKATDYMA----AYKFGEKWDIAMAALY 242 (249)
Q Consensus 175 a~~~l~~~la~e~~------~~~gi~v~~v~pG~v~t~~~--~~~~~~~~~~~~~~~~~~----~~~~~~~~dva~~v~~ 242 (249)
.-..|...+.++|. +..|+||+.+.-|.|-.+.. ...+.+. +.-.+....- ...|...||.++++.|
T Consensus 129 ~g~~Fla~lc~~WE~~a~~a~~~gtRvvllRtGvVLs~~GGaL~~m~~~-fk~glGG~~GsGrQ~~SWIhieD~v~~I~f 207 (297)
T COG1090 129 PGDDFLAQLCQDWEEEALQAQQLGTRVVLLRTGVVLSPDGGALGKMLPL-FKLGLGGKLGSGRQWFSWIHIEDLVNAILF 207 (297)
T ss_pred CCCChHHHHHHHHHHHHhhhhhcCceEEEEEEEEEecCCCcchhhhcch-hhhccCCccCCCCceeeeeeHHHHHHHHHH
Confidence 22233333333221 25689999999999986432 1111111 1111111111 2236678999999999
Q ss_pred hccCC
Q 025672 243 LASDA 247 (249)
Q Consensus 243 l~s~~ 247 (249)
++.++
T Consensus 208 ll~~~ 212 (297)
T COG1090 208 LLENE 212 (297)
T ss_pred HHhCc
Confidence 99874
|
|
| >TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family | Back alignment and domain information |
|---|
Probab=99.24 E-value=3e-10 Score=94.43 Aligned_cols=180 Identities=15% Similarity=0.066 Sum_probs=109.6
Q ss_pred EEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCC-ccE
Q 025672 14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK-LDI 92 (249)
Q Consensus 14 ~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~-id~ 92 (249)
+++||||+|.||+.++++|+++|++|.++.|+.+... ...+..+.+|+.|++++..+++.. +.+.. +|.
T Consensus 1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~---------~~~~~~~~~d~~d~~~l~~a~~~~-~~~~g~~d~ 70 (285)
T TIGR03649 1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSA---------GPNEKHVKFDWLDEDTWDNPFSSD-DGMEPEISA 70 (285)
T ss_pred CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCcccc---------CCCCccccccCCCHHHHHHHHhcc-cCcCCceeE
Confidence 3799999999999999999999999999999976432 124567789999999999988643 22334 899
Q ss_pred EEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhhHHH
Q 025672 93 LVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAA 172 (249)
Q Consensus 93 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~~s 172 (249)
++++++... +. .. ..+.++....+.+. .+||++||.....+.+ .
T Consensus 71 v~~~~~~~~-------~~--~~------------~~~~~i~aa~~~gv--------~~~V~~Ss~~~~~~~~-------~ 114 (285)
T TIGR03649 71 VYLVAPPIP-------DL--AP------------PMIKFIDFARSKGV--------RRFVLLSASIIEKGGP-------A 114 (285)
T ss_pred EEEeCCCCC-------Ch--hH------------HHHHHHHHHHHcCC--------CEEEEeeccccCCCCc-------h
Confidence 999876321 10 00 11233344444432 5799999864432211 1
Q ss_pred HHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHh--hhhh--hcccCCCCHHHHHHHHHHhccCC
Q 025672 173 KAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSK--ATDY--MAAYKFGEKWDIAMAALYLASDA 247 (249)
Q Consensus 173 K~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~--~~~~--~~~~~~~~~~dva~~v~~l~s~~ 247 (249)
+...+.+ +....|+....+.|+++... +..........+. +... .....+.+++|+|+++..++.+.
T Consensus 115 ~~~~~~~-------l~~~~gi~~tilRp~~f~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~Dva~~~~~~l~~~ 185 (285)
T TIGR03649 115 MGQVHAH-------LDSLGGVEYTVLRPTWFMEN-FSEEFHVEAIRKENKIYSATGDGKIPFVSADDIARVAYRALTDK 185 (285)
T ss_pred HHHHHHH-------HHhccCCCEEEEeccHHhhh-hcccccccccccCCeEEecCCCCccCcccHHHHHHHHHHHhcCC
Confidence 2222211 11023899999999988732 2111100111100 0000 01123678999999999888653
|
This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi. |
| >PLN02503 fatty acyl-CoA reductase 2 | Back alignment and domain information |
|---|
Probab=99.23 E-value=6.2e-10 Score=100.55 Aligned_cols=124 Identities=18% Similarity=0.240 Sum_probs=87.1
Q ss_pred CCCcEEEEecCCCchhHHHHHHHHHcCC---eEEEEeCCcch---HHHHHHHHH---------h-c--------CCCeeE
Q 025672 10 LKGKVALLTGGGSGIGFEISLQLGKHGA---AIAIMGRRKTV---LRSAVAALH---------S-L--------GIPAIG 65 (249)
Q Consensus 10 l~~k~~lItGa~~giG~~~a~~l~~~G~---~v~l~~r~~~~---~~~~~~~~~---------~-~--------~~~~~~ 65 (249)
+++|+++||||+|.||+.+++.|++.+. +|+++.|.... .+.+.+++. + . ..++..
T Consensus 117 ~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~ 196 (605)
T PLN02503 117 LRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVP 196 (605)
T ss_pred hcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEE
Confidence 6799999999999999999999998764 68888886432 222322221 1 1 246889
Q ss_pred EEccCCCHH------HHHHHHHHHHHHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC
Q 025672 66 LEGDVRKRE------DAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGG 139 (249)
Q Consensus 66 ~~~Dl~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~ 139 (249)
+..|++++. ..+.+.+ .+|+|||+|+.... .++++..+++|+.++.++++.+...-.
T Consensus 197 v~GDl~d~~LGLs~~~~~~L~~-------~vDiVIH~AA~v~f-------~~~~~~a~~vNV~GT~nLLelA~~~~~--- 259 (605)
T PLN02503 197 VVGNVCESNLGLEPDLADEIAK-------EVDVIINSAANTTF-------DERYDVAIDINTRGPCHLMSFAKKCKK--- 259 (605)
T ss_pred EEeeCCCcccCCCHHHHHHHHh-------cCCEEEECcccccc-------ccCHHHHHHHHHHHHHHHHHHHHHcCC---
Confidence 999999973 3333322 59999999996531 134677899999999999988764311
Q ss_pred CCCCCCCCCceEEEecccc
Q 025672 140 RGQASSSSGGIIINISATL 158 (249)
Q Consensus 140 ~~~~~~~~~g~iv~iss~~ 158 (249)
-.++|++||..
T Consensus 260 --------lk~fV~vSTay 270 (605)
T PLN02503 260 --------LKLFLQVSTAY 270 (605)
T ss_pred --------CCeEEEccCce
Confidence 13477777754
|
|
| >TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal | Back alignment and domain information |
|---|
Probab=99.21 E-value=6.4e-11 Score=94.95 Aligned_cols=102 Identities=14% Similarity=0.138 Sum_probs=78.9
Q ss_pred cEEEEecC-CCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCcc
Q 025672 13 KVALLTGG-GSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD 91 (249)
Q Consensus 13 k~~lItGa-~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 91 (249)
.+=.||.. +||||+++|++|+++|++|+++++... +... ....+|+++.++++++++.+.+.++++|
T Consensus 15 ~VR~itN~SSGgIG~AIA~~la~~Ga~Vvlv~~~~~--------l~~~----~~~~~Dv~d~~s~~~l~~~v~~~~g~iD 82 (227)
T TIGR02114 15 SVRSITNHSTGHLGKIITETFLSAGHEVTLVTTKRA--------LKPE----PHPNLSIREIETTKDLLITLKELVQEHD 82 (227)
T ss_pred CceeecCCcccHHHHHHHHHHHHCCCEEEEEcChhh--------cccc----cCCcceeecHHHHHHHHHHHHHHcCCCC
Confidence 34456665 578999999999999999999886311 1110 1245899999999999999999999999
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHH
Q 025672 92 ILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129 (249)
Q Consensus 92 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~ 129 (249)
++|||||+....++.+.+.++|++++. .+.+.+.+
T Consensus 83 iLVnnAgv~d~~~~~~~s~e~~~~~~~---~~~~~~~~ 117 (227)
T TIGR02114 83 ILIHSMAVSDYTPVYMTDLEQVQASDN---LNEFLSKQ 117 (227)
T ss_pred EEEECCEeccccchhhCCHHHHhhhcc---hhhhhccc
Confidence 999999987777888899999987744 34445444
|
In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity. |
| >PRK12320 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.21 E-value=1.5e-09 Score=99.33 Aligned_cols=172 Identities=10% Similarity=-0.006 Sum_probs=110.6
Q ss_pred EEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCccEE
Q 025672 14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDIL 93 (249)
Q Consensus 14 ~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~v 93 (249)
++|||||+|.||++++++|.++|++|++++|+.... ....+.++++|++|.. +..++ ..+|+|
T Consensus 2 kILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~---------~~~~ve~v~~Dl~d~~-l~~al-------~~~D~V 64 (699)
T PRK12320 2 QILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHDA---------LDPRVDYVCASLRNPV-LQELA-------GEADAV 64 (699)
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhhc---------ccCCceEEEccCCCHH-HHHHh-------cCCCEE
Confidence 589999999999999999999999999999864321 1235789999999973 43332 358999
Q ss_pred EEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhhHHHH
Q 025672 94 VNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAK 173 (249)
Q Consensus 94 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~~sK 173 (249)
||+++.... . ..++|+.++.++++++.. . +.++|++||..+. + ..|..
T Consensus 65 IHLAa~~~~------~------~~~vNv~Gt~nLleAA~~----~---------GvRiV~~SS~~G~---~--~~~~~-- 112 (699)
T PRK12320 65 IHLAPVDTS------A------PGGVGITGLAHVANAAAR----A---------GARLLFVSQAAGR---P--ELYRQ-- 112 (699)
T ss_pred EEcCccCcc------c------hhhHHHHHHHHHHHHHHH----c---------CCeEEEEECCCCC---C--ccccH--
Confidence 999985321 1 124799999999887742 2 2469999986421 1 11221
Q ss_pred HHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccC---CCCHHHHHHHHHHhccC
Q 025672 174 AAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK---FGEKWDIAMAALYLASD 246 (249)
Q Consensus 174 ~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~dva~~v~~l~s~ 246 (249)
.+.+ .. ..++.+..+.|+.+..+..... ...+...+......+. ....+|++++++.+++.
T Consensus 113 --aE~l----l~----~~~~p~~ILR~~nVYGp~~~~~--~~r~I~~~l~~~~~~~pI~vIyVdDvv~alv~al~~ 176 (699)
T PRK12320 113 --AETL----VS----TGWAPSLVIRIAPPVGRQLDWM--VCRTVATLLRSKVSARPIRVLHLDDLVRFLVLALNT 176 (699)
T ss_pred --HHHH----HH----hcCCCEEEEeCceecCCCCccc--HhHHHHHHHHHHHcCCceEEEEHHHHHHHHHHHHhC
Confidence 1222 11 2357888899999986532211 1112222221111122 24889999999888753
|
|
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=99.20 E-value=6.8e-10 Score=102.90 Aligned_cols=142 Identities=19% Similarity=0.169 Sum_probs=99.6
Q ss_pred CcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCcc
Q 025672 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD 91 (249)
Q Consensus 12 ~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 91 (249)
.+++|||||+|.||+++++.|.++|++|.. ...|++|.+.+..++... ++|
T Consensus 380 ~mkiLVtGa~G~iG~~l~~~L~~~g~~v~~------------------------~~~~l~d~~~v~~~i~~~-----~pd 430 (668)
T PLN02260 380 SLKFLIYGRTGWIGGLLGKLCEKQGIAYEY------------------------GKGRLEDRSSLLADIRNV-----KPT 430 (668)
T ss_pred CceEEEECCCchHHHHHHHHHHhCCCeEEe------------------------eccccccHHHHHHHHHhh-----CCC
Confidence 467999999999999999999999988731 113688888888777654 689
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc----------
Q 025672 92 ILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT---------- 161 (249)
Q Consensus 92 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~---------- 161 (249)
+|||+|+....... +...++....+++|+.++.++++++... + .+++++||...+.
T Consensus 431 ~Vih~Aa~~~~~~~-~~~~~~~~~~~~~N~~gt~~l~~a~~~~----g---------~~~v~~Ss~~v~~~~~~~~~~~~ 496 (668)
T PLN02260 431 HVFNAAGVTGRPNV-DWCESHKVETIRANVVGTLTLADVCREN----G---------LLMMNFATGCIFEYDAKHPEGSG 496 (668)
T ss_pred EEEECCcccCCCCC-ChHHhCHHHHHHHHhHHHHHHHHHHHHc----C---------CeEEEEcccceecCCcccccccC
Confidence 99999997542111 1223445788899999999999998743 1 2355565532110
Q ss_pred -c-------CccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEec
Q 025672 162 -A-------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP 200 (249)
Q Consensus 162 -~-------~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~p 200 (249)
+ .+....|+.+|.+.+.+++.... -..+|+..+..
T Consensus 497 ~p~~E~~~~~~~~~~Yg~sK~~~E~~~~~~~~----~~~~r~~~~~~ 539 (668)
T PLN02260 497 IGFKEEDKPNFTGSFYSKTKAMVEELLREYDN----VCTLRVRMPIS 539 (668)
T ss_pred CCCCcCCCCCCCCChhhHHHHHHHHHHHhhhh----heEEEEEEecc
Confidence 1 12236799999999999987642 23577666653
|
|
| >PLN00016 RNA-binding protein; Provisional | Back alignment and domain information |
|---|
Probab=99.19 E-value=1.3e-09 Score=94.39 Aligned_cols=185 Identities=16% Similarity=0.133 Sum_probs=112.3
Q ss_pred CCCcEEEEe----cCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHH-------HHHHhcCCCeeEEEccCCCHHHHHH
Q 025672 10 LKGKVALLT----GGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAV-------AALHSLGIPAIGLEGDVRKREDAVR 78 (249)
Q Consensus 10 l~~k~~lIt----Ga~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~-------~~~~~~~~~~~~~~~Dl~~~~~~~~ 78 (249)
...+++||| ||+|.||..++++|+++|++|++++|+......+. .++.. ..+.++.+|+.| +..
T Consensus 50 ~~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~--~~v~~v~~D~~d---~~~ 124 (378)
T PLN00016 50 VEKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSS--AGVKTVWGDPAD---VKS 124 (378)
T ss_pred cccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhhh--cCceEEEecHHH---HHh
Confidence 345789999 99999999999999999999999999876432221 12221 247888899876 333
Q ss_pred HHHHHHHHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccc
Q 025672 79 VVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL 158 (249)
Q Consensus 79 ~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~ 158 (249)
++. ...+|+|||+++. + ..+...++++ ..+.+. .++|++||..
T Consensus 125 ~~~-----~~~~d~Vi~~~~~---------~-----------~~~~~~ll~a----a~~~gv--------kr~V~~SS~~ 167 (378)
T PLN00016 125 KVA-----GAGFDVVYDNNGK---------D-----------LDEVEPVADW----AKSPGL--------KQFLFCSSAG 167 (378)
T ss_pred hhc-----cCCccEEEeCCCC---------C-----------HHHHHHHHHH----HHHcCC--------CEEEEEccHh
Confidence 332 1368999998762 1 1122233333 333322 5799999975
Q ss_pred ccccCcc--------chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhh--hcc-
Q 025672 159 HYTATWY--------QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDY--MAA- 227 (249)
Q Consensus 159 ~~~~~~~--------~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~--~~~- 227 (249)
.+..... ...+. +|...+.+.+ ..++.+..+.|+.+..+..... ....+...+... ++.
T Consensus 168 vyg~~~~~p~~E~~~~~p~~-sK~~~E~~l~--------~~~l~~~ilRp~~vyG~~~~~~-~~~~~~~~~~~~~~i~~~ 237 (378)
T PLN00016 168 VYKKSDEPPHVEGDAVKPKA-GHLEVEAYLQ--------KLGVNWTSFRPQYIYGPGNNKD-CEEWFFDRLVRGRPVPIP 237 (378)
T ss_pred hcCCCCCCCCCCCCcCCCcc-hHHHHHHHHH--------HcCCCeEEEeceeEECCCCCCc-hHHHHHHHHHcCCceeec
Confidence 4432110 00112 6766665432 3478999999999986543221 112222222221 111
Q ss_pred ------cCCCCHHHHHHHHHHhccC
Q 025672 228 ------YKFGEKWDIAMAALYLASD 246 (249)
Q Consensus 228 ------~~~~~~~dva~~v~~l~s~ 246 (249)
.-+...+|+++++..++..
T Consensus 238 g~g~~~~~~i~v~Dva~ai~~~l~~ 262 (378)
T PLN00016 238 GSGIQLTQLGHVKDLASMFALVVGN 262 (378)
T ss_pred CCCCeeeceecHHHHHHHHHHHhcC
Confidence 1245789999999988864
|
|
| >COG4982 3-oxoacyl-[acyl-carrier protein] | Back alignment and domain information |
|---|
Probab=99.19 E-value=2.2e-09 Score=94.21 Aligned_cols=229 Identities=16% Similarity=0.092 Sum_probs=149.8
Q ss_pred CCCCCCCcEEEEecCC-CchhHHHHHHHHHcCCeEEEEeCCcch-HHHHHHHH----HhcCCCeeEEEccCCCHHHHHHH
Q 025672 6 KGDILKGKVALLTGGG-SGIGFEISLQLGKHGAAIAIMGRRKTV-LRSAVAAL----HSLGIPAIGLEGDVRKREDAVRV 79 (249)
Q Consensus 6 ~~~~l~~k~~lItGa~-~giG~~~a~~l~~~G~~v~l~~r~~~~-~~~~~~~~----~~~~~~~~~~~~Dl~~~~~~~~~ 79 (249)
+...++++++||||++ +.||-+++..|+..|++||++..+-++ -.+..+.+ ..+|..+.++..++....+++++
T Consensus 390 ~~~~y~d~valVTGA~~gSIaa~Vv~~LL~gGAtVI~TTS~~s~~r~efyr~LYa~~a~~ga~LwvVpaN~~SysDVdAl 469 (866)
T COG4982 390 NGGTYGDKVALVTGASKGSIAAAVVARLLAGGATVIATTSRLSEERTEFYRSLYARHARYGAALWVVPANMGSYSDVDAL 469 (866)
T ss_pred CCCCcccceEEEecCCCcchHHHHHHHHHhCCcEEEEEcccccHHHHHHHHHHHHhhCCCCceEEEEeccccchhhHHHH
Confidence 4456789999999999 789999999999999999998765443 22333333 34477899999999999999999
Q ss_pred HHHHHHHhC--------------CccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCC
Q 025672 80 VESTINHFG--------------KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASS 145 (249)
Q Consensus 80 ~~~~~~~~~--------------~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ 145 (249)
++.+..... .+|.+|=-|.....+.+.+.++.. +..+++-++....++-.+.+.-..++. .
T Consensus 470 IewIg~eq~~t~g~~s~~~k~a~~ptll~PFAAp~v~G~l~~agsra-E~~~rilLw~V~Rliggl~~~~s~r~v----~ 544 (866)
T COG4982 470 IEWIGDEQTETVGPQSIHIKLAWTPTLLFPFAAPRVSGELADAGSRA-EFAMRILLWNVLRLIGGLKKQGSSRGV----D 544 (866)
T ss_pred HHHhccccccccCCcceecccccCcceeeecccCCccCccccCCchH-HHHHHHHHHHHHHHHHHhhhhccccCc----c
Confidence 999965322 256777666665556666665532 444555555555555554443322221 1
Q ss_pred CCCceEEEeccccccccCccchhhHHHHHHHHHHHHHHHHH--hcCCCCeEEEEEecCccccccccCCCChHHHHHhhhh
Q 025672 146 SSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALE--WGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATD 223 (249)
Q Consensus 146 ~~~g~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~e--~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~ 223 (249)
.+-++|.-.|.. ..-+.+...|+-+|.+++.++-.+..| |+ ..+.+..-..||+..+..... .+.+-...+
T Consensus 545 -~R~hVVLPgSPN-rG~FGgDGaYgEsK~aldav~~RW~sEs~Wa--~~vsl~~A~IGWtrGTGLMg~---Ndiiv~aiE 617 (866)
T COG4982 545 -TRLHVVLPGSPN-RGMFGGDGAYGESKLALDAVVNRWHSESSWA--ARVSLAHALIGWTRGTGLMGH---NDIIVAAIE 617 (866)
T ss_pred -cceEEEecCCCC-CCccCCCcchhhHHHHHHHHHHHhhccchhh--HHHHHhhhheeeeccccccCC---cchhHHHHH
Confidence 125566666642 112345678999999999999888776 32 135555667899986543322 222222222
Q ss_pred hhcccCCCCHHHHHHHHHHhccCC
Q 025672 224 YMAAYKFGEKWDIAMAALYLASDA 247 (249)
Q Consensus 224 ~~~~~~~~~~~dva~~v~~l~s~~ 247 (249)
+.- -|.-+++|++..++-||+.+
T Consensus 618 k~G-V~tyS~~EmA~~LLgL~sae 640 (866)
T COG4982 618 KAG-VRTYSTDEMAFNLLGLASAE 640 (866)
T ss_pred HhC-ceecCHHHHHHHHHhhccHH
Confidence 211 23457899999999998865
|
|
| >KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.11 E-value=5.3e-09 Score=84.05 Aligned_cols=203 Identities=14% Similarity=0.020 Sum_probs=134.6
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhC
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 88 (249)
..++++++||||.|+||++++..|..+|..|+.+|.-........+.+.. ...+..+.-|+..+ ++.
T Consensus 24 p~~~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~~~~~~-~~~fel~~hdv~~p-----l~~------- 90 (350)
T KOG1429|consen 24 PSQNLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKENLEHWIG-HPNFELIRHDVVEP-----LLK------- 90 (350)
T ss_pred CCCCcEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccchhhcchhcc-CcceeEEEeechhH-----HHH-------
Confidence 46789999999999999999999999999999998755443333333321 23566677777665 333
Q ss_pred CccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc-------
Q 025672 89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT------- 161 (249)
Q Consensus 89 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~------- 161 (249)
.+|.|+|.|....+..+. ..-.+++..|++++++.+..+.... .+++..|+..-+.
T Consensus 91 evD~IyhLAapasp~~y~----~npvktIktN~igtln~lglakrv~-------------aR~l~aSTseVYgdp~~hpq 153 (350)
T KOG1429|consen 91 EVDQIYHLAAPASPPHYK----YNPVKTIKTNVIGTLNMLGLAKRVG-------------ARFLLASTSEVYGDPLVHPQ 153 (350)
T ss_pred HhhhhhhhccCCCCcccc----cCccceeeecchhhHHHHHHHHHhC-------------ceEEEeecccccCCcccCCC
Confidence 378899988865543221 1225678899999999888776442 4477776654321
Q ss_pred ---------cCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCC--hHHHHHhhhhhhcc---
Q 025672 162 ---------ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA--PEEIRSKATDYMAA--- 227 (249)
Q Consensus 162 ---------~~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~--~~~~~~~~~~~~~~--- 227 (249)
+...++.|...|-..+.|+....+ ..||.+....+-.+..|.+.-... ...+.......-|+
T Consensus 154 ~e~ywg~vnpigpr~cydegKr~aE~L~~~y~k----~~giE~rIaRifNtyGPrm~~~dgrvvsnf~~q~lr~epltv~ 229 (350)
T KOG1429|consen 154 VETYWGNVNPIGPRSCYDEGKRVAETLCYAYHK----QEGIEVRIARIFNTYGPRMHMDDGRVVSNFIAQALRGEPLTVY 229 (350)
T ss_pred ccccccccCcCCchhhhhHHHHHHHHHHHHhhc----ccCcEEEEEeeecccCCccccCCChhhHHHHHHHhcCCCeEEE
Confidence 223577899999988888877765 457888888777777665533221 12333333332222
Q ss_pred ------cCCCCHHHHHHHHHHhcc
Q 025672 228 ------YKFGEKWDIAMAALYLAS 245 (249)
Q Consensus 228 ------~~~~~~~dva~~v~~l~s 245 (249)
+.+....|..+.++.|+.
T Consensus 230 g~G~qtRSF~yvsD~Vegll~Lm~ 253 (350)
T KOG1429|consen 230 GDGKQTRSFQYVSDLVEGLLRLME 253 (350)
T ss_pred cCCcceEEEEeHHHHHHHHHHHhc
Confidence 234457788888888874
|
|
| >PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.09 E-value=2.2e-09 Score=94.95 Aligned_cols=123 Identities=19% Similarity=0.214 Sum_probs=84.8
Q ss_pred EecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCccEEEEc
Q 025672 17 LTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNA 96 (249)
Q Consensus 17 ItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ 96 (249)
|+||++|+|.+++..|...|++|+.+.+...+.. . ....+++.+++.
T Consensus 43 l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~~~~-------------------~--------------~~~~~~~~~~~d 89 (450)
T PRK08261 43 LVGGAGRLAEALAALLAGLGYDVVANNDGGLTWA-------------------A--------------GWGDRFGALVFD 89 (450)
T ss_pred EEccCchhHHHHHHHHhhCCCeeeecCccccccc-------------------c--------------CcCCcccEEEEE
Confidence 8888999999999999999999998765443100 0 001234444432
Q ss_pred CCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhhHHHHHHH
Q 025672 97 AAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAV 176 (249)
Q Consensus 97 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~~sK~a~ 176 (249)
+... .+.++ +.+.+.+++..++.|.+ +|+||+++|..... ....|+++|+++
T Consensus 90 ~~~~-------~~~~~--------l~~~~~~~~~~l~~l~~----------~griv~i~s~~~~~---~~~~~~~akaal 141 (450)
T PRK08261 90 ATGI-------TDPAD--------LKALYEFFHPVLRSLAP----------CGRVVVLGRPPEAA---ADPAAAAAQRAL 141 (450)
T ss_pred CCCC-------CCHHH--------HHHHHHHHHHHHHhccC----------CCEEEEEccccccC---CchHHHHHHHHH
Confidence 2210 11222 22444566677777643 38899999976653 345699999999
Q ss_pred HHHHHHHHHHhcCCCCeEEEEEecCc
Q 025672 177 DSITRSLALEWGTDYAIRVNGIAPGP 202 (249)
Q Consensus 177 ~~l~~~la~e~~~~~gi~v~~v~pG~ 202 (249)
.+++|++++|+ ++||+++.|.|++
T Consensus 142 ~gl~rsla~E~--~~gi~v~~i~~~~ 165 (450)
T PRK08261 142 EGFTRSLGKEL--RRGATAQLVYVAP 165 (450)
T ss_pred HHHHHHHHHHh--hcCCEEEEEecCC
Confidence 99999999999 4599999998875
|
|
| >KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.02 E-value=1.3e-09 Score=101.43 Aligned_cols=178 Identities=20% Similarity=0.195 Sum_probs=143.1
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCCe-EEEEeCCcchH--H-HHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHH
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGAA-IAIMGRRKTVL--R-SAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~~-v~l~~r~~~~~--~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 86 (249)
..|+++|+||-||.|.+++.+|..+|++ +++++|+--+. + ......+..|.++.+-..|++..+..+.++++. .+
T Consensus 1767 peksYii~GGLGGFGLELaqWLi~RGar~lVLtSRsGirtGYQa~~vrrWr~~GVqV~vsT~nitt~~ga~~Li~~s-~k 1845 (2376)
T KOG1202|consen 1767 PEKSYIIVGGLGGFGLELAQWLIQRGARKLVLTSRSGIRTGYQALMVRRWRRRGVQVQVSTSNITTAEGARGLIEES-NK 1845 (2376)
T ss_pred ccceEEEeccccchhHHHHHHHHhcCceEEEEeccccchhhHHHHHHHHHHhcCeEEEEecccchhhhhHHHHHHHh-hh
Confidence 4799999999999999999999999995 89999874442 3 234555677888888888999999999998875 45
Q ss_pred hCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccc
Q 025672 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ 166 (249)
Q Consensus 87 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~ 166 (249)
++++.+++|-|.+..+.-+++.+++.+.+.-+..+.++.+|-+.-...-..- -.+|..||..+-.+..++
T Consensus 1846 l~~vGGiFnLA~VLRD~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C~~L----------dyFv~FSSvscGRGN~GQ 1915 (2376)
T KOG1202|consen 1846 LGPVGGIFNLAAVLRDGLIENQTPKNFKDVAKPKYSGTINLDRVSREICPEL----------DYFVVFSSVSCGRGNAGQ 1915 (2376)
T ss_pred cccccchhhHHHHHHhhhhcccChhHHHhhhccceeeeeehhhhhhhhCccc----------ceEEEEEeecccCCCCcc
Confidence 6899999999998888889999999999999999999999866554332222 338889999988899999
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccc
Q 025672 167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK 204 (249)
Q Consensus 167 ~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~ 204 (249)
..|+-+.++++.+...-..+ |..-.+|..|.+-
T Consensus 1916 tNYG~aNS~MERiceqRr~~-----GfPG~AiQWGAIG 1948 (2376)
T KOG1202|consen 1916 TNYGLANSAMERICEQRRHE-----GFPGTAIQWGAIG 1948 (2376)
T ss_pred cccchhhHHHHHHHHHhhhc-----CCCcceeeeeccc
Confidence 99999999999998765543 4444566665553
|
|
| >PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated | Back alignment and domain information |
|---|
Probab=98.95 E-value=5.8e-09 Score=90.12 Aligned_cols=83 Identities=23% Similarity=0.290 Sum_probs=64.8
Q ss_pred CCCCCcEEEEecC----------------CCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCC
Q 025672 8 DILKGKVALLTGG----------------GSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVR 71 (249)
Q Consensus 8 ~~l~~k~~lItGa----------------~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~ 71 (249)
.+++||++||||| +|++|+++|++|+++|++|++++++.. ++ . .. .+..+|++
T Consensus 184 ~~l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~-~~-----~---~~--~~~~~dv~ 252 (399)
T PRK05579 184 KDLAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVN-LP-----T---PA--GVKRIDVE 252 (399)
T ss_pred cccCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcc-cc-----C---CC--CcEEEccC
Confidence 4689999999999 455999999999999999999998753 11 0 11 13467999
Q ss_pred CHHHHHHHHHHHHHHhCCccEEEEcCCCCCCCC
Q 025672 72 KREDAVRVVESTINHFGKLDILVNAAAGNFLVP 104 (249)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~ 104 (249)
+.+++.+.+. +.++++|++|||||+....+
T Consensus 253 ~~~~~~~~v~---~~~~~~DilI~~Aav~d~~~ 282 (399)
T PRK05579 253 SAQEMLDAVL---AALPQADIFIMAAAVADYRP 282 (399)
T ss_pred CHHHHHHHHH---HhcCCCCEEEEccccccccc
Confidence 9888877765 45789999999999865443
|
|
| >PRK12548 shikimate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.92 E-value=7e-09 Score=86.34 Aligned_cols=84 Identities=24% Similarity=0.222 Sum_probs=67.9
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCCe-EEEEeCCc---chHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHH
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAA-IAIMGRRK---TVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTI 84 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~-v~l~~r~~---~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 84 (249)
.+++|+++|+|+ ||+|++++..|++.|++ |++++|+. ++.+++.+++...+..+.+..+|+++.++++..++
T Consensus 123 ~~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~--- 198 (289)
T PRK12548 123 DVKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIA--- 198 (289)
T ss_pred CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhc---
Confidence 467899999999 69999999999999996 99999997 67778888776555556677789988777766544
Q ss_pred HHhCCccEEEEcCCCC
Q 025672 85 NHFGKLDILVNAAAGN 100 (249)
Q Consensus 85 ~~~~~id~vi~~ag~~ 100 (249)
..|+||||....
T Consensus 199 ----~~DilINaTp~G 210 (289)
T PRK12548 199 ----SSDILVNATLVG 210 (289)
T ss_pred ----cCCEEEEeCCCC
Confidence 469999987643
|
|
| >cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase | Back alignment and domain information |
|---|
Probab=98.82 E-value=4.9e-08 Score=76.61 Aligned_cols=84 Identities=21% Similarity=0.284 Sum_probs=68.3
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
.++++++++|+||+|++|+.+++.|++.|++|++++|+.++++.+.+++.... ...+..+|..+.+++.+++.
T Consensus 24 ~~l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~~~~~~~------ 96 (194)
T cd01078 24 KDLKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARF-GEGVGAVETSDDAARAAAIK------ 96 (194)
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhc-CCcEEEeeCCCHHHHHHHHh------
Confidence 46789999999999999999999999999999999999988888888775321 23455678888888777664
Q ss_pred CCccEEEEcCCC
Q 025672 88 GKLDILVNAAAG 99 (249)
Q Consensus 88 ~~id~vi~~ag~ 99 (249)
..|+||++...
T Consensus 97 -~~diVi~at~~ 107 (194)
T cd01078 97 -GADVVFAAGAA 107 (194)
T ss_pred -cCCEEEECCCC
Confidence 46888886653
|
Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo |
| >PRK06732 phosphopantothenate--cysteine ligase; Validated | Back alignment and domain information |
|---|
Probab=98.76 E-value=5e-08 Score=78.39 Aligned_cols=99 Identities=13% Similarity=0.093 Sum_probs=68.6
Q ss_pred cEEEEecCCCc-hhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCcc
Q 025672 13 KVALLTGGGSG-IGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD 91 (249)
Q Consensus 13 k~~lItGa~~g-iG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 91 (249)
.+-.||+.++| +|+++|++|+++|++|++++|+..... .....+.++.++ +.+...+.+.+.++.+|
T Consensus 16 ~VR~itN~SSG~iG~aLA~~L~~~G~~V~li~r~~~~~~-------~~~~~v~~i~v~-----s~~~m~~~l~~~~~~~D 83 (229)
T PRK06732 16 SVRGITNHSTGQLGKIIAETFLAAGHEVTLVTTKTAVKP-------EPHPNLSIIEIE-----NVDDLLETLEPLVKDHD 83 (229)
T ss_pred CceeecCccchHHHHHHHHHHHhCCCEEEEEECcccccC-------CCCCCeEEEEEe-----cHHHHHHHHHHHhcCCC
Confidence 45677777765 999999999999999999987642100 011245565542 33333444444556799
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHH
Q 025672 92 ILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVG 123 (249)
Q Consensus 92 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~ 123 (249)
+||||||.....+....+.+++..++++|...
T Consensus 84 ivIh~AAvsd~~~~~~~~~~~~~~~~~v~~~~ 115 (229)
T PRK06732 84 VLIHSMAVSDYTPVYMTDLEEVSASDNLNEFL 115 (229)
T ss_pred EEEeCCccCCceehhhhhhhhhhhhhhhhhhh
Confidence 99999998766666667788888888887553
|
|
| >PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA | Back alignment and domain information |
|---|
Probab=98.73 E-value=1.4e-06 Score=70.24 Aligned_cols=183 Identities=17% Similarity=0.122 Sum_probs=106.5
Q ss_pred EEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCccEEE
Q 025672 15 ALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILV 94 (249)
Q Consensus 15 ~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi 94 (249)
++|+||+|.+|+.+++.|++.|++|.++.|+.. ....+++...| ++++.+|+.|.+++.++++ .+|.|+
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~--~~~~~~l~~~g--~~vv~~d~~~~~~l~~al~-------g~d~v~ 69 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPS--SDRAQQLQALG--AEVVEADYDDPESLVAALK-------GVDAVF 69 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSH--HHHHHHHHHTT--TEEEES-TT-HHHHHHHHT-------TCSEEE
T ss_pred CEEECCccHHHHHHHHHHHhCCCCcEEEEeccc--hhhhhhhhccc--ceEeecccCCHHHHHHHHc-------CCceEE
Confidence 689999999999999999999999999999873 33344454444 5677999999999888876 689999
Q ss_pred EcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCc----cchhhH
Q 025672 95 NAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW----YQIHVS 170 (249)
Q Consensus 95 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~----~~~~y~ 170 (249)
++.+... . .-.....++++++...-. -++| .||........ +...+-
T Consensus 70 ~~~~~~~--------~--------~~~~~~~~li~Aa~~agV------------k~~v-~ss~~~~~~~~~~~~p~~~~~ 120 (233)
T PF05368_consen 70 SVTPPSH--------P--------SELEQQKNLIDAAKAAGV------------KHFV-PSSFGADYDESSGSEPEIPHF 120 (233)
T ss_dssp EESSCSC--------C--------CHHHHHHHHHHHHHHHT-------------SEEE-ESEESSGTTTTTTSTTHHHHH
T ss_pred eecCcch--------h--------hhhhhhhhHHHhhhcccc------------ceEE-EEEecccccccccccccchhh
Confidence 9887533 1 112223345555554322 2355 56654443211 111222
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChH-HHHH------hhhhhhcccCC-CCHHHHHHHHHH
Q 025672 171 AAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPE-EIRS------KATDYMAAYKF-GEKWDIAMAALY 242 (249)
Q Consensus 171 ~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~-~~~~------~~~~~~~~~~~-~~~~dva~~v~~ 242 (249)
..|..++.+. + ..++..+.|.||+.. ++........ .... ..........+ .+.+|+++.+.-
T Consensus 121 ~~k~~ie~~l----~----~~~i~~t~i~~g~f~-e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvg~~va~ 191 (233)
T PF05368_consen 121 DQKAEIEEYL----R----ESGIPYTIIRPGFFM-ENLLPPFAPVVDIKKSKDVVTLPGPGNQKAVPVTDTRDVGRAVAA 191 (233)
T ss_dssp HHHHHHHHHH----H----HCTSEBEEEEE-EEH-HHHHTTTHHTTCSCCTSSEEEEETTSTSEEEEEEHHHHHHHHHHH
T ss_pred hhhhhhhhhh----h----hccccceeccccchh-hhhhhhhcccccccccceEEEEccCCCccccccccHHHHHHHHHH
Confidence 3454444333 2 337899999999886 4332211110 0000 00000000122 377999999988
Q ss_pred hccC
Q 025672 243 LASD 246 (249)
Q Consensus 243 l~s~ 246 (249)
++.+
T Consensus 192 il~~ 195 (233)
T PF05368_consen 192 ILLD 195 (233)
T ss_dssp HHHS
T ss_pred HHcC
Confidence 7765
|
NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B .... |
| >TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic | Back alignment and domain information |
|---|
Probab=98.72 E-value=6.5e-08 Score=83.36 Aligned_cols=111 Identities=21% Similarity=0.210 Sum_probs=75.6
Q ss_pred CCCCCcEEEEecC---------------CCc-hhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCC
Q 025672 8 DILKGKVALLTGG---------------GSG-IGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVR 71 (249)
Q Consensus 8 ~~l~~k~~lItGa---------------~~g-iG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~ 71 (249)
.+++||++||||| |+| +|.++|++|..+|++|++++++.... ... ....+|++
T Consensus 181 ~~~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~---------~~~--~~~~~~v~ 249 (390)
T TIGR00521 181 EDLEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLL---------TPP--GVKSIKVS 249 (390)
T ss_pred cccCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccC---------CCC--CcEEEEec
Confidence 3588999999999 667 99999999999999999988765421 111 22557999
Q ss_pred CHHHH-HHHHHHHHHHhCCccEEEEcCCCCCCCCCCCCC--HHHHHHHHhhhhHHHHHHHHHHH
Q 025672 72 KREDA-VRVVESTINHFGKLDILVNAAAGNFLVPAEDLS--PNGFRTVIEIDSVGTFIMCHEAL 132 (249)
Q Consensus 72 ~~~~~-~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~--~~~~~~~~~~n~~~~~~l~~~~~ 132 (249)
+.+++ ++++++. ++.+|++|+|||+....+....+ .......+..|+.-.--+++.+.
T Consensus 250 ~~~~~~~~~~~~~---~~~~D~~i~~Aavsd~~~~~~~~~Ki~~~~~~~~l~L~~~pdil~~l~ 310 (390)
T TIGR00521 250 TAEEMLEAALNEL---AKDFDIFISAAAVADFKPKTVFEGKIKKQGEELSLKLVKNPDIIAEVR 310 (390)
T ss_pred cHHHHHHHHHHhh---cccCCEEEEccccccccccccccccccccCCceeEEEEeCcHHHHHHH
Confidence 99998 6666443 47899999999987655432211 11112234556655555555544
|
This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity. |
| >KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=98.70 E-value=2.9e-07 Score=71.86 Aligned_cols=188 Identities=18% Similarity=0.139 Sum_probs=114.3
Q ss_pred cEEEEecCCCchhHHHHHHHHHcCC---eEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCC
Q 025672 13 KVALLTGGGSGIGFEISLQLGKHGA---AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK 89 (249)
Q Consensus 13 k~~lItGa~~giG~~~a~~l~~~G~---~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 89 (249)
++++|||++|=+|++|.+.+.++|. +.++.+.. .+|+++.++.+++|++. +
T Consensus 2 ~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~sk---------------------d~DLt~~a~t~~lF~~e-----k 55 (315)
T KOG1431|consen 2 KKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIGSK---------------------DADLTNLADTRALFESE-----K 55 (315)
T ss_pred ceEEEecCCchHHHHHHHHHHhcCCCCcceEEeccc---------------------cccccchHHHHHHHhcc-----C
Confidence 6899999999999999999999987 45555432 25999999999999875 6
Q ss_pred ccEEEEcCCCCC--CCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc------
Q 025672 90 LDILVNAAAGNF--LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT------ 161 (249)
Q Consensus 90 id~vi~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~------ 161 (249)
+-.|||.|+-.. ... .....+=|.+.+++| -+.++.+...-.+ ++++..|.+-+-
T Consensus 56 PthVIhlAAmVGGlf~N-~~ynldF~r~Nl~in----dNVlhsa~e~gv~------------K~vsclStCIfPdkt~yP 118 (315)
T KOG1431|consen 56 PTHVIHLAAMVGGLFHN-NTYNLDFIRKNLQIN----DNVLHSAHEHGVK------------KVVSCLSTCIFPDKTSYP 118 (315)
T ss_pred CceeeehHhhhcchhhc-CCCchHHHhhcceec----hhHHHHHHHhchh------------hhhhhcceeecCCCCCCC
Confidence 778888776332 111 112233344444443 3344444333222 145444433210
Q ss_pred ----------cCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCC-----ChHHHHHh------
Q 025672 162 ----------ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL-----APEEIRSK------ 220 (249)
Q Consensus 162 ----------~~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~-----~~~~~~~~------ 220 (249)
+-+....|+-+|.-+.-..+..+.+++ -...++.|-.+..|.....+ .|.-+.+.
T Consensus 119 IdEtmvh~gpphpsN~gYsyAKr~idv~n~aY~~qhg----~~~tsviPtNvfGphDNfnpe~sHVlPali~r~h~ak~~ 194 (315)
T KOG1431|consen 119 IDETMVHNGPPHPSNFGYSYAKRMIDVQNQAYRQQHG----RDYTSVIPTNVFGPHDNFNPENSHVLPALIHRFHEAKRN 194 (315)
T ss_pred CCHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHhC----CceeeeccccccCCCCCCCcccccchHHHHHHHHHHHhc
Confidence 113455689999777666677776654 45667777666654332222 22222221
Q ss_pred -------hhhhhcccCCCCHHHHHHHHHHhccCC
Q 025672 221 -------ATDYMAAYKFGEKWDIAMAALYLASDA 247 (249)
Q Consensus 221 -------~~~~~~~~~~~~~~dva~~v~~l~s~~ 247 (249)
+....|++.+...+|.|+++.|++.+-
T Consensus 195 gtd~~~VwGsG~PlRqFiys~DLA~l~i~vlr~Y 228 (315)
T KOG1431|consen 195 GTDELTVWGSGSPLRQFIYSDDLADLFIWVLREY 228 (315)
T ss_pred CCceEEEecCCChHHHHhhHhHHHHHHHHHHHhh
Confidence 112256666778899999999998653
|
|
| >KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=98.65 E-value=8.8e-07 Score=71.59 Aligned_cols=202 Identities=16% Similarity=0.116 Sum_probs=126.8
Q ss_pred CCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHH
Q 025672 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (249)
Q Consensus 7 ~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 86 (249)
..+++|-++-|.||+|.+|+-++.+|++.|..|++=.|-.+-.-.-.+-+.+. .++.+...|+.|+++++++++.
T Consensus 56 RsS~sGiVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~~r~lkvmGdL-GQvl~~~fd~~DedSIr~vvk~---- 130 (391)
T KOG2865|consen 56 RSSVSGIVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDPRHLKVMGDL-GQVLFMKFDLRDEDSIRAVVKH---- 130 (391)
T ss_pred cccccceEEEEecccccccHHHHHHHhhcCCeEEEeccCCccchhheeecccc-cceeeeccCCCCHHHHHHHHHh----
Confidence 34578999999999999999999999999999999887544222211122222 3689999999999999999984
Q ss_pred hCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccc
Q 025672 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ 166 (249)
Q Consensus 87 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~ 166 (249)
-++|||..|.-.+.. ..+. -++|+.++-.+++.+-..-.+ ++|.+|+..+- ....
T Consensus 131 ---sNVVINLIGrd~eTk--nf~f------~Dvn~~~aerlAricke~GVe------------rfIhvS~Lgan--v~s~ 185 (391)
T KOG2865|consen 131 ---SNVVINLIGRDYETK--NFSF------EDVNVHIAERLARICKEAGVE------------RFIHVSCLGAN--VKSP 185 (391)
T ss_pred ---CcEEEEeeccccccC--Cccc------ccccchHHHHHHHHHHhhChh------------heeehhhcccc--ccCh
Confidence 589999999654321 1222 247888888887777654333 38888887633 3334
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCC--------CHHHHHH
Q 025672 167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFG--------EKWDIAM 238 (249)
Q Consensus 167 ~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~dva~ 238 (249)
+-|--+|++-+--++. ++ + ....|.|.-+..+....-..-..+++. ...+|+..-+ ..-|||.
T Consensus 186 Sr~LrsK~~gE~aVrd---af--P---eAtIirPa~iyG~eDrfln~ya~~~rk-~~~~pL~~~GekT~K~PVyV~DVaa 256 (391)
T KOG2865|consen 186 SRMLRSKAAGEEAVRD---AF--P---EATIIRPADIYGTEDRFLNYYASFWRK-FGFLPLIGKGEKTVKQPVYVVDVAA 256 (391)
T ss_pred HHHHHhhhhhHHHHHh---hC--C---cceeechhhhcccchhHHHHHHHHHHh-cCceeeecCCcceeeccEEEehHHH
Confidence 4566667665544432 22 1 234567766664321111111112222 2334443322 3458998
Q ss_pred HHHHhccCC
Q 025672 239 AALYLASDA 247 (249)
Q Consensus 239 ~v~~l~s~~ 247 (249)
+|.-.+.|.
T Consensus 257 ~IvnAvkDp 265 (391)
T KOG2865|consen 257 AIVNAVKDP 265 (391)
T ss_pred HHHHhccCc
Confidence 888777654
|
|
| >KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.65 E-value=6.6e-07 Score=76.64 Aligned_cols=177 Identities=15% Similarity=0.098 Sum_probs=110.0
Q ss_pred CCCCCCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHH
Q 025672 3 SPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVES 82 (249)
Q Consensus 3 ~~~~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~ 82 (249)
++.+....+..+|+|+||+|++|+-+++.|.++|+.|..+-|+.++.+.... +.........+..|.....++..-+..
T Consensus 70 ~~~~~~~~~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~-~~~~d~~~~~v~~~~~~~~d~~~~~~~ 148 (411)
T KOG1203|consen 70 SPPNNNSKKPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLG-VFFVDLGLQNVEADVVTAIDILKKLVE 148 (411)
T ss_pred ccCCCCCCCCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhc-ccccccccceeeeccccccchhhhhhh
Confidence 3566677788999999999999999999999999999999999887776655 111122344555566655443333222
Q ss_pred HHHHhC-CccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc
Q 025672 83 TINHFG-KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT 161 (249)
Q Consensus 83 ~~~~~~-~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~ 161 (249)
. .+ ...+++-++|..+... +...-..+...|..++++++...-. -+++.+||+.+-.
T Consensus 149 ~---~~~~~~~v~~~~ggrp~~e-------d~~~p~~VD~~g~knlvdA~~~aGv------------k~~vlv~si~~~~ 206 (411)
T KOG1203|consen 149 A---VPKGVVIVIKGAGGRPEEE-------DIVTPEKVDYEGTKNLVDACKKAGV------------KRVVLVGSIGGTK 206 (411)
T ss_pred h---ccccceeEEecccCCCCcc-------cCCCcceecHHHHHHHHHHHHHhCC------------ceEEEEEeecCcc
Confidence 1 11 3456777777544221 1222335667888888888844333 3489998876654
Q ss_pred cCccchhhHHHHHHHHHHH-HHHHHHhcCCCCeEEEEEecCcccc
Q 025672 162 ATWYQIHVSAAKAAVDSIT-RSLALEWGTDYAIRVNGIAPGPIKD 205 (249)
Q Consensus 162 ~~~~~~~y~~sK~a~~~l~-~~la~e~~~~~gi~v~~v~pG~v~t 205 (249)
.......+.. .....-. ++...++. ..|+.-..|.||..+.
T Consensus 207 ~~~~~~~~~~--~~~~~~~k~~~e~~~~-~Sgl~ytiIR~g~~~~ 248 (411)
T KOG1203|consen 207 FNQPPNILLL--NGLVLKAKLKAEKFLQ-DSGLPYTIIRPGGLEQ 248 (411)
T ss_pred cCCCchhhhh--hhhhhHHHHhHHHHHH-hcCCCcEEEecccccc
Confidence 4332222221 1111111 22333444 7789999999988874
|
|
| >KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.59 E-value=7.1e-07 Score=77.67 Aligned_cols=125 Identities=18% Similarity=0.227 Sum_probs=87.7
Q ss_pred CCCcEEEEecCCCchhHHHHHHHHHcCC---eEEEEeCCcch---HHHH--------HHHHHhc----CCCeeEEEccCC
Q 025672 10 LKGKVALLTGGGSGIGFEISLQLGKHGA---AIAIMGRRKTV---LRSA--------VAALHSL----GIPAIGLEGDVR 71 (249)
Q Consensus 10 l~~k~~lItGa~~giG~~~a~~l~~~G~---~v~l~~r~~~~---~~~~--------~~~~~~~----~~~~~~~~~Dl~ 71 (249)
+++|+++||||+|++|+-+.+.|++.-- +++++-|.+.. .+++ .+.+... -.++..+.+|++
T Consensus 10 ~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi~ 89 (467)
T KOG1221|consen 10 YKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDIS 89 (467)
T ss_pred hCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceecccccc
Confidence 7899999999999999999999997642 68887774321 1222 2222221 246788999999
Q ss_pred CHH------HHHHHHHHHHHHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCC
Q 025672 72 KRE------DAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASS 145 (249)
Q Consensus 72 ~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ 145 (249)
+++ +.+.+. ..+|+|||+|+...+ .|.++..+.+|..|+.++++.+.....-.
T Consensus 90 ~~~LGis~~D~~~l~-------~eV~ivih~AAtvrF-------de~l~~al~iNt~Gt~~~l~lak~~~~l~------- 148 (467)
T KOG1221|consen 90 EPDLGISESDLRTLA-------DEVNIVIHSAATVRF-------DEPLDVALGINTRGTRNVLQLAKEMVKLK------- 148 (467)
T ss_pred CcccCCChHHHHHHH-------hcCCEEEEeeeeecc-------chhhhhhhhhhhHhHHHHHHHHHHhhhhh-------
Confidence 875 233222 369999999996432 24467788999999999999887665432
Q ss_pred CCCceEEEeccccc
Q 025672 146 SSGGIIINISATLH 159 (249)
Q Consensus 146 ~~~g~iv~iss~~~ 159 (249)
.++.+|....
T Consensus 149 ----~~vhVSTAy~ 158 (467)
T KOG1221|consen 149 ----ALVHVSTAYS 158 (467)
T ss_pred ----eEEEeehhhe
Confidence 2777777654
|
|
| >KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.54 E-value=3.1e-07 Score=72.69 Aligned_cols=216 Identities=18% Similarity=0.110 Sum_probs=138.9
Q ss_pred CcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHH-HHHHH-----HhcCCCeeEEEccCCCHHHHHHHHHHHHH
Q 025672 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRS-AVAAL-----HSLGIPAIGLEGDVRKREDAVRVVESTIN 85 (249)
Q Consensus 12 ~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~-~~~~~-----~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 85 (249)
.|++||||-+|-=|.-+++.|+.+|++|-.+-|+...... -.+.+ ...+......-.|++|...+.+++..+
T Consensus 28 rkvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~i-- 105 (376)
T KOG1372|consen 28 RKVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLISTI-- 105 (376)
T ss_pred ceEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhcc--
Confidence 4699999999999999999999999999988776554322 12222 123556778889999999999999877
Q ss_pred HhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccc--cc----
Q 025672 86 HFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISAT--LH---- 159 (249)
Q Consensus 86 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~--~~---- 159 (249)
.++-|.|.|+..+.+ .+.+--+.+-++...|++.|+.++...-...+ -++-.-|+. .+
T Consensus 106 ---kPtEiYnLaAQSHVk----vSFdlpeYTAeVdavGtLRlLdAi~~c~l~~~---------VrfYQAstSElyGkv~e 169 (376)
T KOG1372|consen 106 ---KPTEVYNLAAQSHVK----VSFDLPEYTAEVDAVGTLRLLDAIRACRLTEK---------VRFYQASTSELYGKVQE 169 (376)
T ss_pred ---CchhhhhhhhhcceE----EEeecccceeeccchhhhhHHHHHHhcCcccc---------eeEEecccHhhcccccC
Confidence 688899988877643 11122245567889999999888865433221 222222222 11
Q ss_pred -----cccCccchhhHHHHHHHHHHHHHHHHHhc--CCCCeEEEEEecCccccccccCCCChHHHHH---------hhhh
Q 025672 160 -----YTATWYQIHVSAAKAAVDSITRSLALEWG--TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRS---------KATD 223 (249)
Q Consensus 160 -----~~~~~~~~~y~~sK~a~~~l~~~la~e~~--~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~---------~~~~ 223 (249)
..|+-+.++|+++|-+..+++-..+..|. .-.||-+|.=+|--=+ .+..........+ .+.+
T Consensus 170 ~PQsE~TPFyPRSPYa~aKmy~~WivvNyREAYnmfAcNGILFNHESPRRGe--nFVTRKItRsvakI~~gqqe~~~LGN 247 (376)
T KOG1372|consen 170 IPQSETTPFYPRSPYAAAKMYGYWIVVNYREAYNMFACNGILFNHESPRRGE--NFVTRKITRSVAKISLGQQEKIELGN 247 (376)
T ss_pred CCcccCCCCCCCChhHHhhhhheEEEEEhHHhhcceeeccEeecCCCCcccc--chhhHHHHHHHHHhhhcceeeEEecc
Confidence 23445678899999888877766555432 1457777766663221 1111111111111 1223
Q ss_pred hhcccCCCCHHHHHHHHHHhccCC
Q 025672 224 YMAAYKFGEKWDIAMAALYLASDA 247 (249)
Q Consensus 224 ~~~~~~~~~~~dva~~v~~l~s~~ 247 (249)
....+-|+.+.|-+++.+..++.+
T Consensus 248 L~a~RDWGhA~dYVEAMW~mLQ~d 271 (376)
T KOG1372|consen 248 LSALRDWGHAGDYVEAMWLMLQQD 271 (376)
T ss_pred hhhhcccchhHHHHHHHHHHHhcC
Confidence 344556888999999999888765
|
|
| >COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.53 E-value=1.7e-06 Score=71.19 Aligned_cols=134 Identities=16% Similarity=0.056 Sum_probs=91.8
Q ss_pred cEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCccE
Q 025672 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI 92 (249)
Q Consensus 13 k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ 92 (249)
+.+|||||||.+|++++++|.++|++|....|+.+...... ..+.+...|+.+++++...+. .+|.
T Consensus 1 ~~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~-------~~v~~~~~d~~~~~~l~~a~~-------G~~~ 66 (275)
T COG0702 1 MKILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA-------GGVEVVLGDLRDPKSLVAGAK-------GVDG 66 (275)
T ss_pred CeEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc-------CCcEEEEeccCCHhHHHHHhc-------cccE
Confidence 36899999999999999999999999999999988776654 468899999999999988876 5788
Q ss_pred EEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhhHHH
Q 025672 93 LVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAA 172 (249)
Q Consensus 93 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~~s 172 (249)
+++..+... .... .............+... .. ..+++.+|+..+.. .....|..+
T Consensus 67 ~~~i~~~~~-~~~~---------~~~~~~~~~~~~a~~a~-----~~--------~~~~~~~s~~~~~~--~~~~~~~~~ 121 (275)
T COG0702 67 VLLISGLLD-GSDA---------FRAVQVTAVVRAAEAAG-----AG--------VKHGVSLSVLGADA--ASPSALARA 121 (275)
T ss_pred EEEEecccc-cccc---------hhHHHHHHHHHHHHHhc-----CC--------ceEEEEeccCCCCC--CCccHHHHH
Confidence 888777543 1110 11122222222222222 11 13466666665443 235678888
Q ss_pred HHHHHHHHHHHHH
Q 025672 173 KAAVDSITRSLAL 185 (249)
Q Consensus 173 K~a~~~l~~~la~ 185 (249)
|...+...++...
T Consensus 122 ~~~~e~~l~~sg~ 134 (275)
T COG0702 122 KAAVEAALRSSGI 134 (275)
T ss_pred HHHHHHHHHhcCC
Confidence 8888877755443
|
|
| >COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.45 E-value=9.7e-07 Score=75.48 Aligned_cols=76 Identities=21% Similarity=0.347 Sum_probs=66.2
Q ss_pred cEEEEecCCCchhHHHHHHHHHcC-CeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCcc
Q 025672 13 KVALLTGGGSGIGFEISLQLGKHG-AAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD 91 (249)
Q Consensus 13 k~~lItGa~~giG~~~a~~l~~~G-~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 91 (249)
+.+||.|+ |+||+.+|.-|+++| .+|++.+|+.++..++.+... .++...++|+.|.+.+.+++++ .|
T Consensus 2 ~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~---~~v~~~~vD~~d~~al~~li~~-------~d 70 (389)
T COG1748 2 MKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIG---GKVEALQVDAADVDALVALIKD-------FD 70 (389)
T ss_pred CcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhcc---ccceeEEecccChHHHHHHHhc-------CC
Confidence 57899999 999999999999999 799999999988877766543 3899999999999999999874 49
Q ss_pred EEEEcCCC
Q 025672 92 ILVNAAAG 99 (249)
Q Consensus 92 ~vi~~ag~ 99 (249)
+|||++..
T Consensus 71 ~VIn~~p~ 78 (389)
T COG1748 71 LVINAAPP 78 (389)
T ss_pred EEEEeCCc
Confidence 99999874
|
|
| >PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase | Back alignment and domain information |
|---|
Probab=98.42 E-value=1.1e-06 Score=76.22 Aligned_cols=76 Identities=21% Similarity=0.332 Sum_probs=60.8
Q ss_pred EEEecCCCchhHHHHHHHHHcCC--eEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCccE
Q 025672 15 ALLTGGGSGIGFEISLQLGKHGA--AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI 92 (249)
Q Consensus 15 ~lItGa~~giG~~~a~~l~~~G~--~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ 92 (249)
|+|.|+ |.+|+.+++.|++++- +|++.+|+.++++++.+++ .+.++.++++|+.|.++++++++ ..|+
T Consensus 1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~--~~~~~~~~~~d~~~~~~l~~~~~-------~~dv 70 (386)
T PF03435_consen 1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKL--LGDRVEAVQVDVNDPESLAELLR-------GCDV 70 (386)
T ss_dssp EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT----TTTTEEEEE--TTTHHHHHHHHT-------TSSE
T ss_pred CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhc--cccceeEEEEecCCHHHHHHHHh-------cCCE
Confidence 689999 9999999999999875 7999999999988888776 45689999999999999988876 3599
Q ss_pred EEEcCCCC
Q 025672 93 LVNAAAGN 100 (249)
Q Consensus 93 vi~~ag~~ 100 (249)
|||++|..
T Consensus 71 Vin~~gp~ 78 (386)
T PF03435_consen 71 VINCAGPF 78 (386)
T ss_dssp EEE-SSGG
T ss_pred EEECCccc
Confidence 99999853
|
Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A. |
| >PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases | Back alignment and domain information |
|---|
Probab=98.40 E-value=2.1e-06 Score=63.23 Aligned_cols=78 Identities=23% Similarity=0.364 Sum_probs=59.8
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCCe-EEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAA-IAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~-v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
++++++++|.|+ ||.|++++..|.+.|++ |+++.|+.++.+++.+++. +..+.++ ++.+ +....
T Consensus 9 ~l~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~--~~~~~~~--~~~~---~~~~~------- 73 (135)
T PF01488_consen 9 DLKGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEFG--GVNIEAI--PLED---LEEAL------- 73 (135)
T ss_dssp TGTTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHT--GCSEEEE--EGGG---HCHHH-------
T ss_pred CcCCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcC--cccccee--eHHH---HHHHH-------
Confidence 689999999997 89999999999999996 9999999999999999882 2234444 3332 22222
Q ss_pred CCccEEEEcCCCCC
Q 025672 88 GKLDILVNAAAGNF 101 (249)
Q Consensus 88 ~~id~vi~~ag~~~ 101 (249)
...|+||++.+...
T Consensus 74 ~~~DivI~aT~~~~ 87 (135)
T PF01488_consen 74 QEADIVINATPSGM 87 (135)
T ss_dssp HTESEEEE-SSTTS
T ss_pred hhCCeEEEecCCCC
Confidence 35899999987543
|
Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C .... |
| >PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=98.39 E-value=2e-06 Score=76.27 Aligned_cols=78 Identities=26% Similarity=0.405 Sum_probs=60.4
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCc-chHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK-TVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
++++|+++|+|+++ +|.++|+.|+++|++|++++++. +.+++..+++...+ +.++..|..+ +..
T Consensus 2 ~~~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~~~--~~~~~~~~~~------------~~~ 66 (450)
T PRK14106 2 ELKGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGELG--IELVLGEYPE------------EFL 66 (450)
T ss_pred CcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcC--CEEEeCCcch------------hHh
Confidence 57899999999887 99999999999999999999975 34455455554433 5577778776 123
Q ss_pred CCccEEEEcCCCCC
Q 025672 88 GKLDILVNAAAGNF 101 (249)
Q Consensus 88 ~~id~vi~~ag~~~ 101 (249)
+.+|+||+++|..+
T Consensus 67 ~~~d~vv~~~g~~~ 80 (450)
T PRK14106 67 EGVDLVVVSPGVPL 80 (450)
T ss_pred hcCCEEEECCCCCC
Confidence 57899999999644
|
|
| >PRK09620 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.38 E-value=5.4e-07 Score=72.28 Aligned_cols=85 Identities=27% Similarity=0.357 Sum_probs=52.6
Q ss_pred CCCcEEEEecCC----------------CchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCH
Q 025672 10 LKGKVALLTGGG----------------SGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKR 73 (249)
Q Consensus 10 l~~k~~lItGa~----------------~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~ 73 (249)
|+||++|||+|. |.+|.++|++|+++|++|+++++....... .. ..+..+..+..|....
T Consensus 1 l~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~---~~-~~~~~~~~V~s~~d~~ 76 (229)
T PRK09620 1 MKGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKPN---DI-NNQLELHPFEGIIDLQ 76 (229)
T ss_pred CCCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCc---cc-CCceeEEEEecHHHHH
Confidence 579999999886 999999999999999999988753221110 00 0012233333322222
Q ss_pred HHHHHHHHHHHHHhCCccEEEEcCCCCCCC
Q 025672 74 EDAVRVVESTINHFGKLDILVNAAAGNFLV 103 (249)
Q Consensus 74 ~~~~~~~~~~~~~~~~id~vi~~ag~~~~~ 103 (249)
+.+.++++ . ..+|+|||+|+...+.
T Consensus 77 ~~l~~~~~----~-~~~D~VIH~AAvsD~~ 101 (229)
T PRK09620 77 DKMKSIIT----H-EKVDAVIMAAAGSDWV 101 (229)
T ss_pred HHHHHHhc----c-cCCCEEEECcccccee
Confidence 23332221 1 2589999999986543
|
|
| >PLN00106 malate dehydrogenase | Back alignment and domain information |
|---|
Probab=98.37 E-value=5.4e-06 Score=69.84 Aligned_cols=151 Identities=13% Similarity=0.086 Sum_probs=95.5
Q ss_pred CCCcEEEEecCCCchhHHHHHHHHHcCC--eEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 10 LKGKVALLTGGGSGIGFEISLQLGKHGA--AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 10 l~~k~~lItGa~~giG~~~a~~l~~~G~--~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
-..++++|||++|.||..++..|+.++. +++++|.++ .+....++.+...... ..++++.+++...+
T Consensus 16 ~~~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~--~~g~a~Dl~~~~~~~~--i~~~~~~~d~~~~l------- 84 (323)
T PLN00106 16 APGFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIAN--TPGVAADVSHINTPAQ--VRGFLGDDQLGDAL------- 84 (323)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCC--CCeeEchhhhCCcCce--EEEEeCCCCHHHHc-------
Confidence 3457899999999999999999998775 799999987 2222223433222222 22444443433333
Q ss_pred CCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccc----c---
Q 025672 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH----Y--- 160 (249)
Q Consensus 88 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~----~--- 160 (249)
...|+||+.||.... ...+++..+..|+.....+.+.+.++ .. .+.|+++|.... .
T Consensus 85 ~~aDiVVitAG~~~~------~g~~R~dll~~N~~i~~~i~~~i~~~----~p-------~aivivvSNPvD~~~~i~t~ 147 (323)
T PLN00106 85 KGADLVIIPAGVPRK------PGMTRDDLFNINAGIVKTLCEAVAKH----CP-------NALVNIISNPVNSTVPIAAE 147 (323)
T ss_pred CCCCEEEEeCCCCCC------CCCCHHHHHHHHHHHHHHHHHHHHHH----CC-------CeEEEEeCCCccccHHHHHH
Confidence 468999999997432 12346777888887766665555433 32 244444554442 1
Q ss_pred -----ccCccchhhHHHHHHHHHHHHHHHHHhc
Q 025672 161 -----TATWYQIHVSAAKAAVDSITRSLALEWG 188 (249)
Q Consensus 161 -----~~~~~~~~y~~sK~a~~~l~~~la~e~~ 188 (249)
.+.+..-.|+.++.-...|-..++.++.
T Consensus 148 ~~~~~s~~p~~~viG~~~LDs~Rl~~~lA~~lg 180 (323)
T PLN00106 148 VLKKAGVYDPKKLFGVTTLDVVRANTFVAEKKG 180 (323)
T ss_pred HHHHcCCCCcceEEEEecchHHHHHHHHHHHhC
Confidence 2344556788887667778888888875
|
|
| >PTZ00325 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.31 E-value=5.4e-06 Score=69.79 Aligned_cols=154 Identities=13% Similarity=0.047 Sum_probs=91.2
Q ss_pred CCCCCCCcEEEEecCCCchhHHHHHHHHHcC--CeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHH
Q 025672 6 KGDILKGKVALLTGGGSGIGFEISLQLGKHG--AAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVEST 83 (249)
Q Consensus 6 ~~~~l~~k~~lItGa~~giG~~~a~~l~~~G--~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 83 (249)
++..++.+++.|||++|.||..++..|+.++ .+++++|++ ..+....++.+.... +...+.+|+.+..+.+
T Consensus 2 ~~~~~~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~--~~~g~a~Dl~~~~~~--~~v~~~td~~~~~~~l--- 74 (321)
T PTZ00325 2 RPSALKMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIV--GAPGVAADLSHIDTP--AKVTGYADGELWEKAL--- 74 (321)
T ss_pred CCcCCCCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecC--CCcccccchhhcCcC--ceEEEecCCCchHHHh---
Confidence 3455667799999999999999999999766 479999993 233323344333322 2334566654433332
Q ss_pred HHHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccc----
Q 025672 84 INHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH---- 159 (249)
Q Consensus 84 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~---- 159 (249)
...|+||+++|.... ..+++...+..|+...-.+++.+ .+.+. -++|+++|.-.
T Consensus 75 ----~gaDvVVitaG~~~~------~~~tR~dll~~N~~i~~~i~~~i----~~~~~--------~~iviv~SNPvdv~~ 132 (321)
T PTZ00325 75 ----RGADLVLICAGVPRK------PGMTRDDLFNTNAPIVRDLVAAV----ASSAP--------KAIVGIVSNPVNSTV 132 (321)
T ss_pred ----CCCCEEEECCCCCCC------CCCCHHHHHHHHHHHHHHHHHHH----HHHCC--------CeEEEEecCcHHHHH
Confidence 368999999996321 12345667888887665555544 44433 33666665421
Q ss_pred ---------cccCccchhhHHHHHHHHHHHHHHHHHhc
Q 025672 160 ---------YTATWYQIHVSAAKAAVDSITRSLALEWG 188 (249)
Q Consensus 160 ---------~~~~~~~~~y~~sK~a~~~l~~~la~e~~ 188 (249)
..+.+..-.|+.+-.--..|-..++..+.
T Consensus 133 ~~~~~~~~~~sg~p~~~viG~g~LDs~R~r~~la~~l~ 170 (321)
T PTZ00325 133 PIAAETLKKAGVYDPRKLFGVTTLDVVRARKFVAEALG 170 (321)
T ss_pred HHHHhhhhhccCCChhheeechhHHHHHHHHHHHHHhC
Confidence 12234455677752222245556666553
|
|
| >PRK14982 acyl-ACP reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.29 E-value=4.6e-06 Score=70.47 Aligned_cols=74 Identities=22% Similarity=0.263 Sum_probs=56.4
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHc-C-CeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHH
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKH-G-AAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~-G-~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 86 (249)
++++|+++||||+|.||+.++++|+++ | .++++++|+.++++.+.+++.. .|+. +++ +.
T Consensus 152 ~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~---------~~i~---~l~-------~~ 212 (340)
T PRK14982 152 DLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGG---------GKIL---SLE-------EA 212 (340)
T ss_pred CcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhcc---------ccHH---hHH-------HH
Confidence 688999999999999999999999865 5 4899999998888877766531 1222 222 23
Q ss_pred hCCccEEEEcCCCCC
Q 025672 87 FGKLDILVNAAAGNF 101 (249)
Q Consensus 87 ~~~id~vi~~ag~~~ 101 (249)
+...|+||+.++...
T Consensus 213 l~~aDiVv~~ts~~~ 227 (340)
T PRK14982 213 LPEADIVVWVASMPK 227 (340)
T ss_pred HccCCEEEECCcCCc
Confidence 356899999998643
|
|
| >COG2910 Putative NADH-flavin reductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.26 E-value=8.8e-05 Score=56.45 Aligned_cols=149 Identities=13% Similarity=0.070 Sum_probs=96.8
Q ss_pred EEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCccEE
Q 025672 14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDIL 93 (249)
Q Consensus 14 ~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~v 93 (249)
.+.|+||+|-+|..++++..++|+.|+.+.||..++... ..+.+++.|+.|.+++...+. ..|+|
T Consensus 2 KIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~--------~~~~i~q~Difd~~~~a~~l~-------g~DaV 66 (211)
T COG2910 2 KIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAAR--------QGVTILQKDIFDLTSLASDLA-------GHDAV 66 (211)
T ss_pred eEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcccc--------ccceeecccccChhhhHhhhc-------CCceE
Confidence 578999999999999999999999999999998865432 356788999999999866654 68999
Q ss_pred EEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC--------c-
Q 025672 94 VNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT--------W- 164 (249)
Q Consensus 94 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~--------~- 164 (249)
|...|..... .+. .+.+ -.++++..++.... .|++.++...+.+-. |
T Consensus 67 IsA~~~~~~~------~~~--~~~k--------~~~~li~~l~~agv--------~RllVVGGAGSL~id~g~rLvD~p~ 122 (211)
T COG2910 67 ISAFGAGASD------NDE--LHSK--------SIEALIEALKGAGV--------PRLLVVGGAGSLEIDEGTRLVDTPD 122 (211)
T ss_pred EEeccCCCCC------hhH--HHHH--------HHHHHHHHHhhcCC--------eeEEEEcCccceEEcCCceeecCCC
Confidence 9988854321 111 1111 13444545544332 668877766554321 1
Q ss_pred -cchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccc
Q 025672 165 -YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDT 206 (249)
Q Consensus 165 -~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~ 206 (249)
+...|..+++.- -+...|..+ .++.-+-|+|...-.|
T Consensus 123 fP~ey~~~A~~~a-e~L~~Lr~~----~~l~WTfvSPaa~f~P 160 (211)
T COG2910 123 FPAEYKPEALAQA-EFLDSLRAE----KSLDWTFVSPAAFFEP 160 (211)
T ss_pred CchhHHHHHHHHH-HHHHHHhhc----cCcceEEeCcHHhcCC
Confidence 223345444333 334455543 3478888888666533
|
|
| >KOG2733 consensus Uncharacterized membrane protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.15 E-value=1e-05 Score=67.43 Aligned_cols=79 Identities=15% Similarity=0.203 Sum_probs=68.3
Q ss_pred EEEEecCCCchhHHHHHHHHH----cCCeEEEEeCCcchHHHHHHHHHhcC----CCeeEEEccCCCHHHHHHHHHHHHH
Q 025672 14 VALLTGGGSGIGFEISLQLGK----HGAAIAIMGRRKTVLRSAVAALHSLG----IPAIGLEGDVRKREDAVRVVESTIN 85 (249)
Q Consensus 14 ~~lItGa~~giG~~~a~~l~~----~G~~v~l~~r~~~~~~~~~~~~~~~~----~~~~~~~~Dl~~~~~~~~~~~~~~~ 85 (249)
-++|-||+|.-|.-+.+++.+ .|..+.+.+||++++++..+.+.... ....++.||.+|++++.+++.++
T Consensus 7 DvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~emak~~-- 84 (423)
T KOG2733|consen 7 DVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSANEASLDEMAKQA-- 84 (423)
T ss_pred eEEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccceEEEecCCCHHHHHHHHhhh--
Confidence 478999999999999999998 77889999999999999999986553 22338899999999999998864
Q ss_pred HhCCccEEEEcCCC
Q 025672 86 HFGKLDILVNAAAG 99 (249)
Q Consensus 86 ~~~~id~vi~~ag~ 99 (249)
.+|+||+|.
T Consensus 85 -----~vivN~vGP 93 (423)
T KOG2733|consen 85 -----RVIVNCVGP 93 (423)
T ss_pred -----EEEEecccc
Confidence 699999994
|
|
| >PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=98.00 E-value=1.7e-05 Score=70.23 Aligned_cols=82 Identities=17% Similarity=0.231 Sum_probs=56.6
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
|++++|+++|||+++ +|.++|+.|++.|++|++.+++........+++...+.+ +...+ +..++ ..
T Consensus 1 ~~~~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~~~g~~--~~~~~--~~~~~---~~------ 66 (447)
T PRK02472 1 TEYQNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPEAQELLEEGIK--VICGS--HPLEL---LD------ 66 (447)
T ss_pred CCcCCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHHhcCCE--EEeCC--CCHHH---hc------
Confidence 346899999999986 999999999999999999998765544445556554432 22111 11221 11
Q ss_pred CCccEEEEcCCCCCCC
Q 025672 88 GKLDILVNAAAGNFLV 103 (249)
Q Consensus 88 ~~id~vi~~ag~~~~~ 103 (249)
..+|+||+++|+....
T Consensus 67 ~~~d~vV~s~gi~~~~ 82 (447)
T PRK02472 67 EDFDLMVKNPGIPYTN 82 (447)
T ss_pred CcCCEEEECCCCCCCC
Confidence 1489999999976543
|
|
| >cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.99 E-value=4.2e-05 Score=57.53 Aligned_cols=76 Identities=24% Similarity=0.372 Sum_probs=57.0
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcC-CeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHG-AAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G-~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
.+++++++|+|+ |++|.++++.|.+.| .+|++++|+.++.++..+++.... +..+..+.++. .
T Consensus 16 ~~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~-----~~~~~~~~~~~----------~ 79 (155)
T cd01065 16 ELKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELG-----IAIAYLDLEEL----------L 79 (155)
T ss_pred CCCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcc-----cceeecchhhc----------c
Confidence 467899999998 899999999999996 689999999888888777764321 22344443332 2
Q ss_pred CCccEEEEcCCCC
Q 025672 88 GKLDILVNAAAGN 100 (249)
Q Consensus 88 ~~id~vi~~ag~~ 100 (249)
...|+||++....
T Consensus 80 ~~~Dvvi~~~~~~ 92 (155)
T cd01065 80 AEADLIINTTPVG 92 (155)
T ss_pred ccCCEEEeCcCCC
Confidence 4689999998754
|
Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann |
| >TIGR00507 aroE shikimate 5-dehydrogenase | Back alignment and domain information |
|---|
Probab=97.91 E-value=0.00011 Score=60.76 Aligned_cols=75 Identities=17% Similarity=0.310 Sum_probs=56.7
Q ss_pred CCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCC
Q 025672 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK 89 (249)
Q Consensus 10 l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 89 (249)
.++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++.+++...+. +.....| + . ....
T Consensus 115 ~~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~~~-~~~~~~~-----~---~------~~~~ 178 (270)
T TIGR00507 115 RPNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRYGE-IQAFSMD-----E---L------PLHR 178 (270)
T ss_pred ccCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhcCc-eEEechh-----h---h------cccC
Confidence 46899999998 6999999999999999999999999888888888754332 2222111 1 0 1235
Q ss_pred ccEEEEcCCCC
Q 025672 90 LDILVNAAAGN 100 (249)
Q Consensus 90 id~vi~~ag~~ 100 (249)
.|+||++.+..
T Consensus 179 ~DivInatp~g 189 (270)
T TIGR00507 179 VDLIINATSAG 189 (270)
T ss_pred ccEEEECCCCC
Confidence 89999998864
|
This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain. |
| >PRK00258 aroE shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.91 E-value=5.5e-05 Score=62.76 Aligned_cols=77 Identities=27% Similarity=0.373 Sum_probs=56.8
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcC-CeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHH
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHG-AAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G-~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 86 (249)
..+++|+++|+|+ ||+|++++..|...| .+|++++|+.++.+++++++.... .+.+ ++ +.. +.
T Consensus 119 ~~~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~-~~~~---~~----~~~-------~~ 182 (278)
T PRK00258 119 VDLKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALG-KAEL---DL----ELQ-------EE 182 (278)
T ss_pred CCCCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhcc-ceee---cc----cch-------hc
Confidence 3578999999997 899999999999999 689999999998888888775321 1111 11 111 12
Q ss_pred hCCccEEEEcCCCC
Q 025672 87 FGKLDILVNAAAGN 100 (249)
Q Consensus 87 ~~~id~vi~~ag~~ 100 (249)
....|+|||+....
T Consensus 183 ~~~~DivInaTp~g 196 (278)
T PRK00258 183 LADFDLIINATSAG 196 (278)
T ss_pred cccCCEEEECCcCC
Confidence 24689999987654
|
|
| >cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases | Back alignment and domain information |
|---|
Probab=97.88 E-value=5.3e-05 Score=64.17 Aligned_cols=119 Identities=14% Similarity=0.197 Sum_probs=68.3
Q ss_pred cEEEEecCCCchhHHHHHHHHHcC-------CeEEEEeCCcch--HHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHH
Q 025672 13 KVALLTGGGSGIGFEISLQLGKHG-------AAIAIMGRRKTV--LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVEST 83 (249)
Q Consensus 13 k~~lItGa~~giG~~~a~~l~~~G-------~~v~l~~r~~~~--~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 83 (249)
-+++|||++|.||..++..|+.++ .+|+++++++.. ++....++.+.. .....|++...++
T Consensus 3 ~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~d~~---~~~~~~~~~~~~~------- 72 (325)
T cd01336 3 IRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQDCA---FPLLKSVVATTDP------- 72 (325)
T ss_pred eEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehhhcc---ccccCCceecCCH-------
Confidence 358999999999999999999855 589999996531 222111111100 0011133322222
Q ss_pred HHHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccc
Q 025672 84 INHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISAT 157 (249)
Q Consensus 84 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~ 157 (249)
.+.+...|+|||+||..... ..+. .+.++.|+. +++.+.+.+.+... +.+.++.+|..
T Consensus 73 ~~~l~~aDiVI~tAG~~~~~---~~~R---~~l~~~N~~----i~~~i~~~i~~~~~------~~~iiivvsNP 130 (325)
T cd01336 73 EEAFKDVDVAILVGAMPRKE---GMER---KDLLKANVK----IFKEQGEALDKYAK------KNVKVLVVGNP 130 (325)
T ss_pred HHHhCCCCEEEEeCCcCCCC---CCCH---HHHHHHHHH----HHHHHHHHHHHhCC------CCeEEEEecCc
Confidence 23334789999999974321 1222 455666754 45555555555421 13667777763
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA | Back alignment and domain information |
|---|
Probab=97.82 E-value=0.0004 Score=72.59 Aligned_cols=179 Identities=13% Similarity=0.088 Sum_probs=112.0
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhC
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 88 (249)
.+.++.++|++..++++.+++..|.++|+.|+++..... .. ......+..+..+.+.-.|.++++.++..+.+..+
T Consensus 1752 ~~~~~~~~v~~d~~~~~~~L~~~L~~~G~~v~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1827 (2582)
T TIGR02813 1752 KQSGANALVIDDDGHNAGVLAEKLIAAGWQVAVVRSPWV-VS---HSASPLASAIASVTLGTIDDTSIEAVIKDIEEKTA 1827 (2582)
T ss_pred cccCceeEEEcCCcchHHHHHHHHHhCCCeEEEeecccc-cc---ccccccccccccccccccchHHHHHHHHhhhcccc
Confidence 456888999988999999999999999999887642211 10 11011122233445666777888999888888778
Q ss_pred CccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchh
Q 025672 89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH 168 (249)
Q Consensus 89 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~ 168 (249)
+++.+||..+..... ....+...+...-...+...|.+.|.+.+.+.... ++.++.++...|-.++.....
T Consensus 1828 ~~~g~i~l~~~~~~~-~~~~~~~~~~~~~~~~l~~~f~~ak~~~~~l~~~~--------~~~~~~vsr~~G~~g~~~~~~ 1898 (2582)
T TIGR02813 1828 QIDGFIHLQPQHKSV-ADKVDAIELPEAAKQSLMLAFLFAKLLNVKLATNA--------RASFVTVSRIDGGFGYSNGDA 1898 (2582)
T ss_pred ccceEEEeccccccc-cccccccccchhhHHHHHHHHHHHHhhchhhccCC--------CeEEEEEEecCCccccCCccc
Confidence 999999977643210 00000001111112334445667777655544322 367888888776655432221
Q ss_pred h--------HHHHHHHHHHHHHHHHHhcCCCCeEEEEEecC
Q 025672 169 V--------SAAKAAVDSITRSLALEWGTDYAIRVNGIAPG 201 (249)
Q Consensus 169 y--------~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG 201 (249)
. ....+++.+|+|++++||- .-.+|...+.|.
T Consensus 1899 ~~~~~~~~~~~~~a~l~Gl~Ktl~~E~P-~~~~r~vDl~~~ 1938 (2582)
T TIGR02813 1899 DSGTQQVKAELNQAALAGLTKTLNHEWN-AVFCRALDLAPK 1938 (2582)
T ss_pred cccccccccchhhhhHHHHHHhHHHHCC-CCeEEEEeCCCC
Confidence 1 3458899999999999996 656666666664
|
Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD. |
| >PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism | Back alignment and domain information |
|---|
Probab=97.82 E-value=0.00012 Score=56.77 Aligned_cols=80 Identities=24% Similarity=0.334 Sum_probs=50.1
Q ss_pred CCCcEEEEecCC----------------CchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCH
Q 025672 10 LKGKVALLTGGG----------------SGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKR 73 (249)
Q Consensus 10 l~~k~~lItGa~----------------~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~ 73 (249)
|+||++|||+|. |..|.++|+++..+|++|+++..... +.. ...+..+ ++...
T Consensus 1 l~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~~~-~~~--------p~~~~~i--~v~sa 69 (185)
T PF04127_consen 1 LKGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEVTLIHGPSS-LPP--------PPGVKVI--RVESA 69 (185)
T ss_dssp -TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-TTS-------------TTEEEE--E-SSH
T ss_pred CCCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEEEEEecCcc-ccc--------cccceEE--Eecch
Confidence 579999999875 78999999999999999999887642 111 2245454 45555
Q ss_pred HHHHHHHHHHHHHhCCccEEEEcCCCCCCC
Q 025672 74 EDAVRVVESTINHFGKLDILVNAAAGNFLV 103 (249)
Q Consensus 74 ~~~~~~~~~~~~~~~~id~vi~~ag~~~~~ 103 (249)
+++...+. +.+..-|++|++|++....
T Consensus 70 ~em~~~~~---~~~~~~Di~I~aAAVsDf~ 96 (185)
T PF04127_consen 70 EEMLEAVK---ELLPSADIIIMAAAVSDFR 96 (185)
T ss_dssp HHHHHHHH---HHGGGGSEEEE-SB--SEE
T ss_pred hhhhhhhc---cccCcceeEEEecchhhee
Confidence 55555544 4445569999999986543
|
These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A. |
| >cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR) | Back alignment and domain information |
|---|
Probab=97.78 E-value=0.00057 Score=57.17 Aligned_cols=79 Identities=18% Similarity=0.209 Sum_probs=55.8
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCc
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 90 (249)
++++++|+|+++++|.+++..+...|.+|++++++.++.+.+. ++ +.. ..+|..+.+..+.+.+.. . -..+
T Consensus 144 ~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~---g~~---~~~~~~~~~~~~~~~~~~-~-~~~~ 214 (325)
T cd08253 144 AGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELVR-QA---GAD---AVFNYRAEDLADRILAAT-A-GQGV 214 (325)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-Hc---CCC---EEEeCCCcCHHHHHHHHc-C-CCce
Confidence 5899999999999999999999999999999998876655542 22 322 123555554444443322 1 1369
Q ss_pred cEEEEcCC
Q 025672 91 DILVNAAA 98 (249)
Q Consensus 91 d~vi~~ag 98 (249)
|.+++++|
T Consensus 215 d~vi~~~~ 222 (325)
T cd08253 215 DVIIEVLA 222 (325)
T ss_pred EEEEECCc
Confidence 99999987
|
Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts |
| >PRK15116 sulfur acceptor protein CsdL; Provisional | Back alignment and domain information |
|---|
Probab=97.75 E-value=0.00074 Score=55.42 Aligned_cols=37 Identities=22% Similarity=0.365 Sum_probs=31.6
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCC-eEEEEeCCc
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRK 46 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~-~v~l~~r~~ 46 (249)
.|++..|+|.|+. |+|.++++.|++.|. +++++|.+.
T Consensus 27 kL~~s~VlVvG~G-GVGs~vae~Lar~GVg~itLiD~D~ 64 (268)
T PRK15116 27 LFADAHICVVGIG-GVGSWAAEALARTGIGAITLIDMDD 64 (268)
T ss_pred HhcCCCEEEECcC-HHHHHHHHHHHHcCCCEEEEEeCCE
Confidence 3678889999765 999999999999995 799998753
|
|
| >cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=97.71 E-value=0.002 Score=54.24 Aligned_cols=114 Identities=16% Similarity=0.232 Sum_probs=74.2
Q ss_pred cEEEEecCCCchhHHHHHHHHHcC--CeEEEEeCCcchHHHHHHHHHhc----CCCeeEEEccCCCHHHHHHHHHHHHHH
Q 025672 13 KVALLTGGGSGIGFEISLQLGKHG--AAIAIMGRRKTVLRSAVAALHSL----GIPAIGLEGDVRKREDAVRVVESTINH 86 (249)
Q Consensus 13 k~~lItGa~~giG~~~a~~l~~~G--~~v~l~~r~~~~~~~~~~~~~~~----~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 86 (249)
+.+.|.|+ |++|..++..|+.+| .+|++++++++..+....++.+. +....+. . .+.++
T Consensus 1 ~kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~-~--~~~~~----------- 65 (306)
T cd05291 1 RKVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIK-A--GDYSD----------- 65 (306)
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEE-c--CCHHH-----------
Confidence 36788996 899999999999999 47999999999888888877543 1222222 1 22221
Q ss_pred hCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccc
Q 025672 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL 158 (249)
Q Consensus 87 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~ 158 (249)
+..-|++|+++|.... + ..+. .+.++.|. .+++.+.+.+.+..+ .+.|+++|...
T Consensus 66 l~~aDIVIitag~~~~-~--g~~R---~dll~~N~----~i~~~~~~~i~~~~~-------~~~vivvsNP~ 120 (306)
T cd05291 66 CKDADIVVITAGAPQK-P--GETR---LDLLEKNA----KIMKSIVPKIKASGF-------DGIFLVASNPV 120 (306)
T ss_pred hCCCCEEEEccCCCCC-C--CCCH---HHHHHHHH----HHHHHHHHHHHHhCC-------CeEEEEecChH
Confidence 2468999999986432 1 1233 34455554 455666666665543 37777777644
|
L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine |
| >KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=97.70 E-value=0.00022 Score=54.01 Aligned_cols=153 Identities=13% Similarity=0.055 Sum_probs=94.5
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCC--eEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHH
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGA--AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN 85 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~--~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 85 (249)
.-++.+.++|.||+|-.|..+.+++.+.+. +|+++.|++.... +.+..+.....|.+..++....
T Consensus 14 f~mq~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d~-------at~k~v~q~~vDf~Kl~~~a~~------ 80 (238)
T KOG4039|consen 14 FRMQNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPDP-------ATDKVVAQVEVDFSKLSQLATN------ 80 (238)
T ss_pred HhhhccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCCc-------cccceeeeEEechHHHHHHHhh------
Confidence 347789999999999999999999999986 7999999853222 1233455666676655443322
Q ss_pred HhCCccEEEEcCCCCCCC----CCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc
Q 025672 86 HFGKLDILVNAAAGNFLV----PAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT 161 (249)
Q Consensus 86 ~~~~id~vi~~ag~~~~~----~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~ 161 (249)
+..+|+.+++-|...-+ .+...+.+ -.+.++++. +..+. -.++.+||..+..
T Consensus 81 -~qg~dV~FcaLgTTRgkaGadgfykvDhD-----------yvl~~A~~A----Ke~Gc--------k~fvLvSS~GAd~ 136 (238)
T KOG4039|consen 81 -EQGPDVLFCALGTTRGKAGADGFYKVDHD-----------YVLQLAQAA----KEKGC--------KTFVLVSSAGADP 136 (238)
T ss_pred -hcCCceEEEeecccccccccCceEeechH-----------HHHHHHHHH----HhCCC--------eEEEEEeccCCCc
Confidence 24689999987753221 12222221 112222222 22222 3488899986654
Q ss_pred cCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccc
Q 025672 162 ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDT 206 (249)
Q Consensus 162 ~~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~ 206 (249)
.. ..-|--.|+-++.=+..|.- =++..+.||++..+
T Consensus 137 sS--rFlY~k~KGEvE~~v~eL~F-------~~~~i~RPG~ll~~ 172 (238)
T KOG4039|consen 137 SS--RFLYMKMKGEVERDVIELDF-------KHIIILRPGPLLGE 172 (238)
T ss_pred cc--ceeeeeccchhhhhhhhccc-------cEEEEecCcceecc
Confidence 43 34477777766655533322 25677899999754
|
|
| >PRK05086 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.69 E-value=0.00064 Score=57.28 Aligned_cols=106 Identities=14% Similarity=0.186 Sum_probs=58.7
Q ss_pred cEEEEecCCCchhHHHHHHHHH-c--CCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCC
Q 025672 13 KVALLTGGGSGIGFEISLQLGK-H--GAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK 89 (249)
Q Consensus 13 k~~lItGa~~giG~~~a~~l~~-~--G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 89 (249)
+.++|+||+|+||.+++..|.. . +..++++++++. .+...-++.+.+ ....+.. .+.+++. +.+..
T Consensus 1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~-~~g~alDl~~~~-~~~~i~~--~~~~d~~-------~~l~~ 69 (312)
T PRK05086 1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPV-TPGVAVDLSHIP-TAVKIKG--FSGEDPT-------PALEG 69 (312)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCC-CcceehhhhcCC-CCceEEE--eCCCCHH-------HHcCC
Confidence 4689999999999999998855 3 346888898743 221111222211 1112222 1111221 22245
Q ss_pred ccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC
Q 025672 90 LDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGG 139 (249)
Q Consensus 90 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~ 139 (249)
.|+||.++|...... .+ -...+..|....-.+ .+.|.+..
T Consensus 70 ~DiVIitaG~~~~~~---~~---R~dll~~N~~i~~~i----i~~i~~~~ 109 (312)
T PRK05086 70 ADVVLISAGVARKPG---MD---RSDLFNVNAGIVKNL----VEKVAKTC 109 (312)
T ss_pred CCEEEEcCCCCCCCC---CC---HHHHHHHHHHHHHHH----HHHHHHhC
Confidence 899999999754221 12 345566776554444 55554443
|
|
| >cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases | Back alignment and domain information |
|---|
Probab=97.69 E-value=0.0016 Score=55.19 Aligned_cols=157 Identities=10% Similarity=0.073 Sum_probs=97.1
Q ss_pred CcEEEEecCCCchhHHHHHHHHHcCC-------eEEEEeCCcch--HHHHHHHHHhcC-CCeeEEEccCCCHHHHHHHHH
Q 025672 12 GKVALLTGGGSGIGFEISLQLGKHGA-------AIAIMGRRKTV--LRSAVAALHSLG-IPAIGLEGDVRKREDAVRVVE 81 (249)
Q Consensus 12 ~k~~lItGa~~giG~~~a~~l~~~G~-------~v~l~~r~~~~--~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~ 81 (249)
.+.+.|+|++|.||..++..|+.+|. +++|+|.++.. ++..+.++.+.. .-..-+...-.+
T Consensus 2 p~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~~~~--------- 72 (322)
T cd01338 2 PVRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIVITDDP--------- 72 (322)
T ss_pred CeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceEEecCc---------
Confidence 46789999999999999999998886 69999985443 454444444321 000001111111
Q ss_pred HHHHHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccc--
Q 025672 82 STINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH-- 159 (249)
Q Consensus 82 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~-- 159 (249)
.+.+..-|+||.+||... ++ ..+. .+.+..|+ .+++.+.+.+.+..+ +.+.++++|....
T Consensus 73 --~~~~~daDivvitaG~~~-k~--g~tR---~dll~~N~----~i~~~i~~~i~~~~~------~~~iiivvsNPvD~~ 134 (322)
T cd01338 73 --NVAFKDADWALLVGAKPR-GP--GMER---ADLLKANG----KIFTAQGKALNDVAS------RDVKVLVVGNPCNTN 134 (322)
T ss_pred --HHHhCCCCEEEEeCCCCC-CC--CCcH---HHHHHHHH----HHHHHHHHHHHhhCC------CCeEEEEecCcHHHH
Confidence 223356899999999642 22 2233 33456664 456666666665541 0377777775432
Q ss_pred ------cc-cCccchhhHHHHHHHHHHHHHHHHHhc-CCCCeEE
Q 025672 160 ------YT-ATWYQIHVSAAKAAVDSITRSLALEWG-TDYAIRV 195 (249)
Q Consensus 160 ------~~-~~~~~~~y~~sK~a~~~l~~~la~e~~-~~~gi~v 195 (249)
.. +.+....|+.++..-..|...+++.++ ....|+.
T Consensus 135 t~~~~k~sg~~p~~~ViG~t~LDs~Rl~~~la~~lgv~~~~v~~ 178 (322)
T cd01338 135 ALIAMKNAPDIPPDNFTAMTRLDHNRAKSQLAKKAGVPVTDVKN 178 (322)
T ss_pred HHHHHHHcCCCChHheEEehHHHHHHHHHHHHHHhCcChhHeEE
Confidence 12 255566788899888899999998875 2334553
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase | Back alignment and domain information |
|---|
Probab=97.68 E-value=8e-05 Score=58.63 Aligned_cols=49 Identities=22% Similarity=0.417 Sum_probs=42.6
Q ss_pred CCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHH
Q 025672 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAAL 56 (249)
Q Consensus 7 ~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~ 56 (249)
..+++||+++|+|.. .+|+.+++.|.+.|++|++++++.+.++...+++
T Consensus 23 ~~~l~gk~v~I~G~G-~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~~ 71 (200)
T cd01075 23 TDSLEGKTVAVQGLG-KVGYKLAEHLLEEGAKLIVADINEEAVARAAELF 71 (200)
T ss_pred CCCCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHc
Confidence 457899999999985 8999999999999999999999987777766543
|
Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc |
| >PRK12549 shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.68 E-value=0.00034 Score=58.17 Aligned_cols=77 Identities=18% Similarity=0.145 Sum_probs=56.5
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
.+++|+++|.|+ ||.|++++..|++.|+ +|++++|+.++.+.+.+++........+... +++.. ..
T Consensus 124 ~~~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~~~-----~~~~~-------~~ 190 (284)
T PRK12549 124 DASLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARFPAARATAG-----SDLAA-------AL 190 (284)
T ss_pred CccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhCCCeEEEec-----cchHh-------hh
Confidence 467899999997 5899999999999998 7999999999999998888643332332211 11111 12
Q ss_pred CCccEEEEcCC
Q 025672 88 GKLDILVNAAA 98 (249)
Q Consensus 88 ~~id~vi~~ag 98 (249)
...|+|||+..
T Consensus 191 ~~aDiVInaTp 201 (284)
T PRK12549 191 AAADGLVHATP 201 (284)
T ss_pred CCCCEEEECCc
Confidence 45899999853
|
|
| >cd00704 MDH Malate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.66 E-value=0.00086 Score=56.75 Aligned_cols=113 Identities=12% Similarity=0.188 Sum_probs=70.1
Q ss_pred EEEEecCCCchhHHHHHHHHHcCC-------eEEEEeCCc--chHHHHHHHHHhcCCCeeEEEccCCCHHHH--H--HHH
Q 025672 14 VALLTGGGSGIGFEISLQLGKHGA-------AIAIMGRRK--TVLRSAVAALHSLGIPAIGLEGDVRKREDA--V--RVV 80 (249)
Q Consensus 14 ~~lItGa~~giG~~~a~~l~~~G~-------~v~l~~r~~--~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~--~--~~~ 80 (249)
.+.|||++|.||..++..|+.+|. .++|+|+++ +.++ ....|+.|.... . .+.
T Consensus 2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~~--------------g~~~Dl~d~~~~~~~~~~i~ 67 (323)
T cd00704 2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKALE--------------GVVMELQDCAFPLLKGVVIT 67 (323)
T ss_pred EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCccc--------------eeeeehhhhcccccCCcEEe
Confidence 579999999999999999998764 499999987 4322 333444443200 0 001
Q ss_pred HHHHHHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CCCCCCCCCceEEEeccc
Q 025672 81 ESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGG-RGQASSSSGGIIINISAT 157 (249)
Q Consensus 81 ~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~~~~~~g~iv~iss~ 157 (249)
....+.+...|+||+.||... ++ ..+ -.+.++.|+ .+++.+.+.+.+.. + .+.++++|..
T Consensus 68 ~~~~~~~~~aDiVVitAG~~~-~~--g~t---R~dll~~N~----~i~~~i~~~i~~~~~~-------~~iiivvsNP 128 (323)
T cd00704 68 TDPEEAFKDVDVAILVGAFPR-KP--GME---RADLLRKNA----KIFKEQGEALNKVAKP-------TVKVLVVGNP 128 (323)
T ss_pred cChHHHhCCCCEEEEeCCCCC-Cc--CCc---HHHHHHHhH----HHHHHHHHHHHHhCCC-------CeEEEEeCCc
Confidence 123344567999999999642 21 123 344555664 45666677776652 3 3677777653
|
Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis [] | Back alignment and domain information |
|---|
Probab=97.64 E-value=0.0012 Score=48.92 Aligned_cols=113 Identities=19% Similarity=0.259 Sum_probs=72.9
Q ss_pred EEEEecCCCchhHHHHHHHHHcCC--eEEEEeCCcchHHHHHHHHHhcC--C--CeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 14 VALLTGGGSGIGFEISLQLGKHGA--AIAIMGRRKTVLRSAVAALHSLG--I--PAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 14 ~~lItGa~~giG~~~a~~l~~~G~--~v~l~~r~~~~~~~~~~~~~~~~--~--~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
.+.|+|++|.+|..++..|...+. +++++|++++.++....++.+.. . ...+.. .+.++ +
T Consensus 2 KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~---~~~~~-----------~ 67 (141)
T PF00056_consen 2 KVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITS---GDYEA-----------L 67 (141)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEE---SSGGG-----------G
T ss_pred EEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhccccccccc---ccccc-----------c
Confidence 578999999999999999999986 79999999888887777775431 1 122222 32222 3
Q ss_pred CCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccc
Q 025672 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISAT 157 (249)
Q Consensus 88 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~ 157 (249)
..-|+||..+|.... + ..+ -.+.++.|.. +++.+.+.+.+..+ .+.++.++..
T Consensus 68 ~~aDivvitag~~~~-~--g~s---R~~ll~~N~~----i~~~~~~~i~~~~p-------~~~vivvtNP 120 (141)
T PF00056_consen 68 KDADIVVITAGVPRK-P--GMS---RLDLLEANAK----IVKEIAKKIAKYAP-------DAIVIVVTNP 120 (141)
T ss_dssp TTESEEEETTSTSSS-T--TSS---HHHHHHHHHH----HHHHHHHHHHHHST-------TSEEEE-SSS
T ss_pred ccccEEEEecccccc-c--ccc---HHHHHHHhHh----HHHHHHHHHHHhCC-------ccEEEEeCCc
Confidence 458999999996431 1 123 3444566654 44555555554433 3667777653
|
L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C .... |
| >cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.0016 Score=52.35 Aligned_cols=37 Identities=19% Similarity=0.321 Sum_probs=31.7
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCC-eEEEEeCCc
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRK 46 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~-~v~l~~r~~ 46 (249)
.+++++++|.|.. |+|.++++.|++.|. +++++|.+.
T Consensus 8 ~L~~~~VlVvG~G-GvGs~va~~Lar~GVg~i~LvD~D~ 45 (231)
T cd00755 8 KLRNAHVAVVGLG-GVGSWAAEALARSGVGKLTLIDFDV 45 (231)
T ss_pred HHhCCCEEEECCC-HHHHHHHHHHHHcCCCEEEEECCCE
Confidence 3678889999865 999999999999998 799998754
|
coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown. |
| >PRK00066 ldh L-lactate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.0061 Score=51.51 Aligned_cols=116 Identities=16% Similarity=0.195 Sum_probs=76.5
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCC--eEEEEeCCcchHHHHHHHHHhcC---CCeeEEEccCCCHHHHHHHHHHHHH
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGA--AIAIMGRRKTVLRSAVAALHSLG---IPAIGLEGDVRKREDAVRVVESTIN 85 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~--~v~l~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dl~~~~~~~~~~~~~~~ 85 (249)
+++.+.|+|+ |.+|..++..|+.+|. +++++|++++.++....++.+.. .++.+. . .+. +
T Consensus 5 ~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~-~--~~~-----------~ 69 (315)
T PRK00066 5 QHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIY-A--GDY-----------S 69 (315)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEE-e--CCH-----------H
Confidence 5679999998 9999999999999997 79999999998888877776532 122222 1 121 1
Q ss_pred HhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccc
Q 025672 86 HFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL 158 (249)
Q Consensus 86 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~ 158 (249)
.+..-|+||..+|... ++ ..+. ...++.|.. +++.+.+.+.+... .+.++++|...
T Consensus 70 ~~~~adivIitag~~~-k~--g~~R---~dll~~N~~----i~~~i~~~i~~~~~-------~~~vivvsNP~ 125 (315)
T PRK00066 70 DCKDADLVVITAGAPQ-KP--GETR---LDLVEKNLK----IFKSIVGEVMASGF-------DGIFLVASNPV 125 (315)
T ss_pred HhCCCCEEEEecCCCC-CC--CCCH---HHHHHHHHH----HHHHHHHHHHHhCC-------CeEEEEccCcH
Confidence 2346899999999643 21 1233 344555644 44555656655443 36777777543
|
|
| >TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type | Back alignment and domain information |
|---|
Probab=97.56 E-value=0.00046 Score=57.32 Aligned_cols=79 Identities=18% Similarity=0.229 Sum_probs=56.4
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
++++|+++|.|+ ||.|++++..|++.|+ +|+++.|+.++.+++++++.... .+ .. +...+++.. ..
T Consensus 122 ~~~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~-~~--~~--~~~~~~~~~-------~~ 188 (282)
T TIGR01809 122 PLAGFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVG-VI--TR--LEGDSGGLA-------IE 188 (282)
T ss_pred ccCCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcC-cc--ee--ccchhhhhh-------cc
Confidence 467899999986 7999999999999998 69999999999999888775321 11 11 111122211 12
Q ss_pred CCccEEEEcCCCC
Q 025672 88 GKLDILVNAAAGN 100 (249)
Q Consensus 88 ~~id~vi~~ag~~ 100 (249)
...|+|||+....
T Consensus 189 ~~~DiVInaTp~g 201 (282)
T TIGR01809 189 KAAEVLVSTVPAD 201 (282)
T ss_pred cCCCEEEECCCCC
Confidence 4689999987753
|
This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway. |
| >cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=97.55 E-value=0.0022 Score=54.07 Aligned_cols=80 Identities=26% Similarity=0.293 Sum_probs=58.1
Q ss_pred CCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCC
Q 025672 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK 89 (249)
Q Consensus 10 l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 89 (249)
..+++++|+|+++++|.+++..+...|++|++++++.++.+.+. + .+.. ...|..+.+..+.+...... .+
T Consensus 165 ~~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~---~~~~---~~~~~~~~~~~~~~~~~~~~--~~ 235 (342)
T cd08266 165 RPGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERAK-E---LGAD---YVIDYRKEDFVREVRELTGK--RG 235 (342)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-H---cCCC---eEEecCChHHHHHHHHHhCC--CC
Confidence 35789999999999999999999999999999998877655442 2 2222 12366666655555443321 36
Q ss_pred ccEEEEcCC
Q 025672 90 LDILVNAAA 98 (249)
Q Consensus 90 id~vi~~ag 98 (249)
+|++++++|
T Consensus 236 ~d~~i~~~g 244 (342)
T cd08266 236 VDVVVEHVG 244 (342)
T ss_pred CcEEEECCc
Confidence 999999988
|
This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone |
| >TIGR00518 alaDH alanine dehydrogenase | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.0012 Score=57.12 Aligned_cols=76 Identities=17% Similarity=0.179 Sum_probs=56.0
Q ss_pred CCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCC
Q 025672 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK 89 (249)
Q Consensus 10 l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 89 (249)
+++++++|+|+ |.+|+.+++.+...|++|++++|+.++++.+...+. .. +..+..+.+++.+.+ ..
T Consensus 165 l~~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~g---~~---v~~~~~~~~~l~~~l-------~~ 230 (370)
T TIGR00518 165 VEPGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLDAEFG---GR---IHTRYSNAYEIEDAV-------KR 230 (370)
T ss_pred CCCceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhcC---ce---eEeccCCHHHHHHHH-------cc
Confidence 56788999987 799999999999999999999999877666554432 21 223555666554443 35
Q ss_pred ccEEEEcCCC
Q 025672 90 LDILVNAAAG 99 (249)
Q Consensus 90 id~vi~~ag~ 99 (249)
.|+||++++.
T Consensus 231 aDvVI~a~~~ 240 (370)
T TIGR00518 231 ADLLIGAVLI 240 (370)
T ss_pred CCEEEEcccc
Confidence 7999998865
|
The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP. |
| >PRK13940 glutamyl-tRNA reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.53 E-value=0.00046 Score=60.35 Aligned_cols=75 Identities=16% Similarity=0.166 Sum_probs=56.4
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
++++|+++|.|+ ||+|+.++..|...|. +++++.|+.++.+.+.+++.. .. ....+++..+ +
T Consensus 178 ~l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~----~~-----~~~~~~l~~~-------l 240 (414)
T PRK13940 178 NISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRN----AS-----AHYLSELPQL-------I 240 (414)
T ss_pred CccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcC----Ce-----EecHHHHHHH-------h
Confidence 578999999998 8999999999999996 699999998888888877631 11 1122233222 3
Q ss_pred CCccEEEEcCCCC
Q 025672 88 GKLDILVNAAAGN 100 (249)
Q Consensus 88 ~~id~vi~~ag~~ 100 (249)
...|+||++.+..
T Consensus 241 ~~aDiVI~aT~a~ 253 (414)
T PRK13940 241 KKADIIIAAVNVL 253 (414)
T ss_pred ccCCEEEECcCCC
Confidence 4689999998854
|
|
| >PRK14027 quinate/shikimate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.53 E-value=0.00071 Score=56.16 Aligned_cols=81 Identities=16% Similarity=0.165 Sum_probs=56.4
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
.+++|+++|.|+ ||-+++++..|++.|+ ++++++|+.++.+++.+.+............+ ..++....
T Consensus 124 ~~~~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~~~~~~~~~~~~---~~~~~~~~------- 192 (283)
T PRK14027 124 NAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVD---ARGIEDVI------- 192 (283)
T ss_pred CcCCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhccCcceEEecC---HhHHHHHH-------
Confidence 467899999997 7999999999999998 69999999999999888875321111111122 22222111
Q ss_pred CCccEEEEcCCCC
Q 025672 88 GKLDILVNAAAGN 100 (249)
Q Consensus 88 ~~id~vi~~ag~~ 100 (249)
...|+|||+....
T Consensus 193 ~~~divINaTp~G 205 (283)
T PRK14027 193 AAADGVVNATPMG 205 (283)
T ss_pred hhcCEEEEcCCCC
Confidence 2479999987643
|
|
| >PRK06849 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.49 E-value=0.0012 Score=57.53 Aligned_cols=83 Identities=14% Similarity=0.195 Sum_probs=54.6
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCc
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 90 (249)
+.|+|||||++..+|..+++.|.+.|++|++++.+..........+ .....+...-.+.+...+.+.++.++. ++
T Consensus 3 ~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~~~~~~s~~~----d~~~~~p~p~~d~~~~~~~L~~i~~~~-~i 77 (389)
T PRK06849 3 TKKTVLITGARAPAALELARLFHNAGHTVILADSLKYPLSRFSRAV----DGFYTIPSPRWDPDAYIQALLSIVQRE-NI 77 (389)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHhh----hheEEeCCCCCCHHHHHHHHHHHHHHc-CC
Confidence 3589999999999999999999999999999998865443222222 122222223344444444444444443 48
Q ss_pred cEEEEcCC
Q 025672 91 DILVNAAA 98 (249)
Q Consensus 91 d~vi~~ag 98 (249)
|+||-...
T Consensus 78 d~vIP~~e 85 (389)
T PRK06849 78 DLLIPTCE 85 (389)
T ss_pred CEEEECCh
Confidence 99987654
|
|
| >PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.00028 Score=63.76 Aligned_cols=48 Identities=23% Similarity=0.369 Sum_probs=43.1
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHH
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAAL 56 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~ 56 (249)
..+++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+.+.+++
T Consensus 375 ~~~~~k~vlIlGa-GGagrAia~~L~~~G~~V~i~nR~~e~a~~la~~l 422 (529)
T PLN02520 375 SPLAGKLFVVIGA-GGAGKALAYGAKEKGARVVIANRTYERAKELADAV 422 (529)
T ss_pred cCCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh
Confidence 4578999999999 69999999999999999999999988888877765
|
|
| >PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional | Back alignment and domain information |
|---|
Probab=97.44 E-value=0.0012 Score=56.18 Aligned_cols=81 Identities=20% Similarity=0.307 Sum_probs=55.3
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCC-eEEEEeCCc---------------------chHHHHHHHHHhcCC--Cee
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRK---------------------TVLRSAVAALHSLGI--PAI 64 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~-~v~l~~r~~---------------------~~~~~~~~~~~~~~~--~~~ 64 (249)
.+++++|+|.|+ ||+|..+++.|++.|. +++++|++. .+.+.+++.+...+. ++.
T Consensus 21 ~L~~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~i~ 99 (338)
T PRK12475 21 KIREKHVLIVGA-GALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVEIV 99 (338)
T ss_pred hhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcEEE
Confidence 467899999997 6899999999999998 799999864 234455566655544 345
Q ss_pred EEEccCCCHHHHHHHHHHHHHHhCCccEEEEcCC
Q 025672 65 GLEGDVRKREDAVRVVESTINHFGKLDILVNAAA 98 (249)
Q Consensus 65 ~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag 98 (249)
.+..|++. +.++.++ ...|+||.+..
T Consensus 100 ~~~~~~~~-~~~~~~~-------~~~DlVid~~D 125 (338)
T PRK12475 100 PVVTDVTV-EELEELV-------KEVDLIIDATD 125 (338)
T ss_pred EEeccCCH-HHHHHHh-------cCCCEEEEcCC
Confidence 56666652 3444433 24677776553
|
|
| >KOG2774 consensus NAD dependent epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.00018 Score=56.90 Aligned_cols=160 Identities=15% Similarity=0.151 Sum_probs=104.0
Q ss_pred CCCcEEEEecCCCchhHHHHHHHHHc-CC-eEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 10 LKGKVALLTGGGSGIGFEISLQLGKH-GA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 10 l~~k~~lItGa~~giG~~~a~~l~~~-G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
-+..++||||+-|-+|.++|..|-.+ |. .|++.+-.+.... ..+.| -++-.|+-|..++++++-.
T Consensus 42 ~~~PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp~~-----V~~~G---PyIy~DILD~K~L~eIVVn----- 108 (366)
T KOG2774|consen 42 QKAPRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPPAN-----VTDVG---PYIYLDILDQKSLEEIVVN----- 108 (366)
T ss_pred CCCCeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCchh-----hcccC---CchhhhhhccccHHHhhcc-----
Confidence 34678999999999999999988764 66 4777665443211 11112 2566799999888888643
Q ss_pred CCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC----
Q 025672 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT---- 163 (249)
Q Consensus 88 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~---- 163 (249)
.+||-+||-.+... ...+....-..++|+.|..++++....+- -++..-|.+.++.+.
T Consensus 109 ~RIdWL~HfSALLS-----AvGE~NVpLA~~VNI~GvHNil~vAa~~k-------------L~iFVPSTIGAFGPtSPRN 170 (366)
T KOG2774|consen 109 KRIDWLVHFSALLS-----AVGETNVPLALQVNIRGVHNILQVAAKHK-------------LKVFVPSTIGAFGPTSPRN 170 (366)
T ss_pred cccceeeeHHHHHH-----HhcccCCceeeeecchhhhHHHHHHHHcC-------------eeEeecccccccCCCCCCC
Confidence 48999999655321 12222334456899999999998887542 224444555544432
Q ss_pred --------ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEE-ecCccc
Q 025672 164 --------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGI-APGPIK 204 (249)
Q Consensus 164 --------~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v-~pG~v~ 204 (249)
.+..-|+.||.-.+-+.+.+...+ |+.+-++ .||.+.
T Consensus 171 PTPdltIQRPRTIYGVSKVHAEL~GEy~~hrF----g~dfr~~rfPg~is 216 (366)
T KOG2774|consen 171 PTPDLTIQRPRTIYGVSKVHAELLGEYFNHRF----GVDFRSMRFPGIIS 216 (366)
T ss_pred CCCCeeeecCceeechhHHHHHHHHHHHHhhc----CccceecccCcccc
Confidence 234569999988888777776544 4655555 466554
|
|
| >TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.0013 Score=55.60 Aligned_cols=115 Identities=12% Similarity=0.137 Sum_probs=71.3
Q ss_pred EEEEecCCCchhHHHHHHHHHcCC-------eEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHH--HHH--HH
Q 025672 14 VALLTGGGSGIGFEISLQLGKHGA-------AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAV--RVV--ES 82 (249)
Q Consensus 14 ~~lItGa~~giG~~~a~~l~~~G~-------~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~--~~~--~~ 82 (249)
++.|+|++|.+|..++..|+.+|. .++|+|+++... .......|+.|..... ... ..
T Consensus 1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~------------~a~g~~~Dl~d~~~~~~~~~~~~~~ 68 (324)
T TIGR01758 1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMK------------VLEGVVMELMDCAFPLLDGVVPTHD 68 (324)
T ss_pred CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCccc------------ccceeEeehhcccchhcCceeccCC
Confidence 378999999999999999998664 499999865420 1223444555544110 000 02
Q ss_pred HHHHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CCCCCCCCCceEEEeccc
Q 025672 83 TINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGG-RGQASSSSGGIIINISAT 157 (249)
Q Consensus 83 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~~~~~~g~iv~iss~ 157 (249)
..+.+...|+||+.||.... ..+++.+.++.|+. +++.+.+.+.+.. + .+.|+++|..
T Consensus 69 ~~~~~~~aDiVVitAG~~~~------~~~tr~~ll~~N~~----i~k~i~~~i~~~~~~-------~~iiivvsNP 127 (324)
T TIGR01758 69 PAVAFTDVDVAILVGAFPRK------EGMERRDLLSKNVK----IFKEQGRALDKLAKK-------DCKVLVVGNP 127 (324)
T ss_pred hHHHhCCCCEEEEcCCCCCC------CCCcHHHHHHHHHH----HHHHHHHHHHhhCCC-------CeEEEEeCCc
Confidence 23445679999999996422 12235666777754 5566666665552 2 3667777753
|
This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography |
| >TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E | Back alignment and domain information |
|---|
Probab=97.37 E-value=0.0022 Score=50.58 Aligned_cols=81 Identities=21% Similarity=0.336 Sum_probs=53.1
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCC-eEEEEeCCc-------------------chHHHHHHHHHhcCCCe--eEE
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRK-------------------TVLRSAVAALHSLGIPA--IGL 66 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~-~v~l~~r~~-------------------~~~~~~~~~~~~~~~~~--~~~ 66 (249)
.+++++++|.| .||+|..+++.|+..|. +++++|.+. .+.+.+++.+...+..+ ..+
T Consensus 18 kl~~~~VlviG-~GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~ 96 (202)
T TIGR02356 18 RLLNSHVLIIG-AGGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQVTAL 96 (202)
T ss_pred HhcCCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCCEEEEe
Confidence 47789999998 56999999999999998 799999863 33444555555544433 333
Q ss_pred EccCCCHHHHHHHHHHHHHHhCCccEEEEcCC
Q 025672 67 EGDVRKREDAVRVVESTINHFGKLDILVNAAA 98 (249)
Q Consensus 67 ~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag 98 (249)
..++.+ +.+.++ +...|+||.+..
T Consensus 97 ~~~i~~-~~~~~~-------~~~~D~Vi~~~d 120 (202)
T TIGR02356 97 KERVTA-ENLELL-------INNVDLVLDCTD 120 (202)
T ss_pred hhcCCH-HHHHHH-------HhCCCEEEECCC
Confidence 333332 233322 235788877654
|
coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli. |
| >PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.0008 Score=60.07 Aligned_cols=48 Identities=21% Similarity=0.292 Sum_probs=41.6
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHH
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAAL 56 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~ 56 (249)
..+++|+++|+|+ ||+|++++..|.+.|++|++++|+.++.+.+.+++
T Consensus 328 ~~~~~k~vlIiGa-GgiG~aia~~L~~~G~~V~i~~R~~~~~~~la~~~ 375 (477)
T PRK09310 328 IPLNNQHVAIVGA-GGAAKAIATTLARAGAELLIFNRTKAHAEALASRC 375 (477)
T ss_pred CCcCCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh
Confidence 3567899999996 79999999999999999999999988777776654
|
|
| >COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.0013 Score=54.36 Aligned_cols=80 Identities=23% Similarity=0.359 Sum_probs=59.4
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHH
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 86 (249)
.+.++++++|.|+. |-+++++..|++.|+ +++++.|+.++.+++++.+...+..+.. .+..+.+..+
T Consensus 122 ~~~~~~~vlilGAG-GAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~~~~~--~~~~~~~~~~--------- 189 (283)
T COG0169 122 VDVTGKRVLILGAG-GAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGAAVEA--AALADLEGLE--------- 189 (283)
T ss_pred cccCCCEEEEECCc-HHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccccccc--cccccccccc---------
Confidence 35578999999875 899999999999996 7999999999999999999765542222 2222222211
Q ss_pred hCCccEEEEcCCCCC
Q 025672 87 FGKLDILVNAAAGNF 101 (249)
Q Consensus 87 ~~~id~vi~~ag~~~ 101 (249)
..|++||+.....
T Consensus 190 --~~dliINaTp~Gm 202 (283)
T COG0169 190 --EADLLINATPVGM 202 (283)
T ss_pred --ccCEEEECCCCCC
Confidence 3799999877543
|
|
| >cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase | Back alignment and domain information |
|---|
Probab=97.31 E-value=0.0013 Score=55.90 Aligned_cols=80 Identities=11% Similarity=0.187 Sum_probs=54.9
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCc
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 90 (249)
.|.+++|+|++|++|..++..+...|++|+.+.++.++.+.+.+.+ |.. .++ |-.+.+++.+.+.+... +.+
T Consensus 151 ~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~l---Ga~-~vi--~~~~~~~~~~~i~~~~~--~gv 222 (338)
T cd08295 151 KGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKL---GFD-DAF--NYKEEPDLDAALKRYFP--NGI 222 (338)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCc-eeE--EcCCcccHHHHHHHhCC--CCc
Confidence 5789999999999999999888889999999898877766655434 322 122 32222233333333321 469
Q ss_pred cEEEEcCC
Q 025672 91 DILVNAAA 98 (249)
Q Consensus 91 d~vi~~ag 98 (249)
|+++.+.|
T Consensus 223 d~v~d~~g 230 (338)
T cd08295 223 DIYFDNVG 230 (338)
T ss_pred EEEEECCC
Confidence 99999877
|
This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in |
| >PRK12749 quinate/shikimate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.31 E-value=0.0017 Score=54.03 Aligned_cols=82 Identities=21% Similarity=0.219 Sum_probs=53.9
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCC-eEEEEeCCc---chHHHHHHHHHhcC-CCeeEEEccCCCHHHHHHHHHH
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRK---TVLRSAVAALHSLG-IPAIGLEGDVRKREDAVRVVES 82 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~-~v~l~~r~~---~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~ 82 (249)
.++++|+++|.|+ ||-+++++..|+..|. +|+++.|+. ++.+++++.+.... ..+.+. ++.+.+.+.
T Consensus 120 ~~~~~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~~~~~~~~~~--~~~~~~~l~----- 191 (288)
T PRK12749 120 FDIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVT--DLADQQAFA----- 191 (288)
T ss_pred CCcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhhccCceEEEe--chhhhhhhh-----
Confidence 3568899999997 5779999999999997 799999985 46777777664321 112222 221111111
Q ss_pred HHHHhCCccEEEEcCCC
Q 025672 83 TINHFGKLDILVNAAAG 99 (249)
Q Consensus 83 ~~~~~~~id~vi~~ag~ 99 (249)
+.....|+|||+...
T Consensus 192 --~~~~~aDivINaTp~ 206 (288)
T PRK12749 192 --EALASADILTNGTKV 206 (288)
T ss_pred --hhcccCCEEEECCCC
Confidence 122468999997653
|
|
| >COG3268 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.31 E-value=0.00074 Score=56.12 Aligned_cols=77 Identities=16% Similarity=0.156 Sum_probs=61.1
Q ss_pred CcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCcc
Q 025672 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD 91 (249)
Q Consensus 12 ~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 91 (249)
....+|-||+|..|.-+|++|+++|.+..|.+||..++..+...+. .....+ ++-++..+++..+ +.+
T Consensus 6 e~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~LG---~~~~~~--p~~~p~~~~~~~~-------~~~ 73 (382)
T COG3268 6 EYDIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRASLG---PEAAVF--PLGVPAALEAMAS-------RTQ 73 (382)
T ss_pred ceeEEEEccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHHhcC---cccccc--CCCCHHHHHHHHh-------cce
Confidence 4678999999999999999999999999999999999999888873 333333 3444555555544 578
Q ss_pred EEEEcCCCC
Q 025672 92 ILVNAAAGN 100 (249)
Q Consensus 92 ~vi~~ag~~ 100 (249)
+|+||+|..
T Consensus 74 VVlncvGPy 82 (382)
T COG3268 74 VVLNCVGPY 82 (382)
T ss_pred EEEeccccc
Confidence 999999943
|
|
| >PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional | Back alignment and domain information |
|---|
Probab=97.27 E-value=0.0018 Score=57.25 Aligned_cols=81 Identities=22% Similarity=0.229 Sum_probs=56.3
Q ss_pred CCCCCcEEEEecCC----------------CchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCC
Q 025672 8 DILKGKVALLTGGG----------------SGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVR 71 (249)
Q Consensus 8 ~~l~~k~~lItGa~----------------~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~ 71 (249)
.+|+||.+|||+|. |-.|.++|+++..+|++|+++.-... + .....+.++. +.
T Consensus 252 ~~l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp~~-~--------~~p~~v~~i~--V~ 320 (475)
T PRK13982 252 KPLAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGPVD-L--------ADPQGVKVIH--VE 320 (475)
T ss_pred cccCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCCcC-C--------CCCCCceEEE--ec
Confidence 46899999999984 68999999999999999998874322 1 1122355553 33
Q ss_pred CHHHHHHHHHHHHHHhCCccEEEEcCCCCCCC
Q 025672 72 KREDAVRVVESTINHFGKLDILVNAAAGNFLV 103 (249)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~ 103 (249)
+.+++.+.+.+.++ .|++|++|++..+.
T Consensus 321 ---ta~eM~~av~~~~~-~Di~I~aAAVaDyr 348 (475)
T PRK13982 321 ---SARQMLAAVEAALP-ADIAIFAAAVADWR 348 (475)
T ss_pred ---CHHHHHHHHHhhCC-CCEEEEecccccee
Confidence 34444444444454 69999999986544
|
|
| >PRK14968 putative methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.26 E-value=0.0054 Score=47.39 Aligned_cols=78 Identities=19% Similarity=0.189 Sum_probs=56.0
Q ss_pred CCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCC---eeEEEccCCCHHHHHHHHHHHHHH
Q 025672 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIP---AIGLEGDVRKREDAVRVVESTINH 86 (249)
Q Consensus 10 l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~---~~~~~~Dl~~~~~~~~~~~~~~~~ 86 (249)
.+++++|-.|+..|. ++..+++++.+|+.++++++.++...+.+...+.+ +.++.+|+.+.. .+
T Consensus 22 ~~~~~vLd~G~G~G~---~~~~l~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~---------~~- 88 (188)
T PRK14968 22 KKGDRVLEVGTGSGI---VAIVAAKNGKKVVGVDINPYAVECAKCNAKLNNIRNNGVEVIRSDLFEPF---------RG- 88 (188)
T ss_pred cCCCEEEEEccccCH---HHHHHHhhcceEEEEECCHHHHHHHHHHHHHcCCCCcceEEEeccccccc---------cc-
Confidence 367889999988776 56666667899999999988777776666543322 788888875421 11
Q ss_pred hCCccEEEEcCCCCC
Q 025672 87 FGKLDILVNAAAGNF 101 (249)
Q Consensus 87 ~~~id~vi~~ag~~~ 101 (249)
..+|.|+.|..+..
T Consensus 89 -~~~d~vi~n~p~~~ 102 (188)
T PRK14968 89 -DKFDVILFNPPYLP 102 (188)
T ss_pred -cCceEEEECCCcCC
Confidence 26899999987654
|
|
| >PLN03154 putative allyl alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.25 E-value=0.0017 Score=55.56 Aligned_cols=80 Identities=13% Similarity=0.200 Sum_probs=54.4
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCc
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 90 (249)
.|.++||+|++|++|..++..+...|++|+.++++.++.+.+.+++ |... ++ |-.+.+++.+.+.+.. -+.+
T Consensus 158 ~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~l---Ga~~-vi--~~~~~~~~~~~i~~~~--~~gv 229 (348)
T PLN03154 158 KGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL---GFDE-AF--NYKEEPDLDAALKRYF--PEGI 229 (348)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhc---CCCE-EE--ECCCcccHHHHHHHHC--CCCc
Confidence 5889999999999999999888889999999888877665554344 3321 22 3332223333333321 1369
Q ss_pred cEEEEcCC
Q 025672 91 DILVNAAA 98 (249)
Q Consensus 91 d~vi~~ag 98 (249)
|+++.+.|
T Consensus 230 D~v~d~vG 237 (348)
T PLN03154 230 DIYFDNVG 237 (348)
T ss_pred EEEEECCC
Confidence 99999887
|
|
| >COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only] | Back alignment and domain information |
|---|
Probab=97.23 E-value=0.0018 Score=55.03 Aligned_cols=77 Identities=21% Similarity=0.368 Sum_probs=52.7
Q ss_pred CcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh-C-C
Q 025672 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF-G-K 89 (249)
Q Consensus 12 ~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~-~ 89 (249)
|.++||+||+||+|..........|++++++..+.++.+ .+.++ |....+ |..+.+ +.+++++.. + .
T Consensus 143 g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~-~~~~l---GAd~vi---~y~~~~----~~~~v~~~t~g~g 211 (326)
T COG0604 143 GETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLE-LLKEL---GADHVI---NYREED----FVEQVRELTGGKG 211 (326)
T ss_pred CCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHH-HHHhc---CCCEEE---cCCccc----HHHHHHHHcCCCC
Confidence 899999999999999999988899987777666665555 44433 433222 333333 444444433 3 5
Q ss_pred ccEEEEcCCC
Q 025672 90 LDILVNAAAG 99 (249)
Q Consensus 90 id~vi~~ag~ 99 (249)
+|+++...|.
T Consensus 212 vDvv~D~vG~ 221 (326)
T COG0604 212 VDVVLDTVGG 221 (326)
T ss_pred ceEEEECCCH
Confidence 9999999883
|
|
| >PLN02602 lactate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.01 Score=50.76 Aligned_cols=115 Identities=13% Similarity=0.185 Sum_probs=73.6
Q ss_pred cEEEEecCCCchhHHHHHHHHHcCC--eEEEEeCCcchHHHHHHHHHhcCC---CeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 13 KVALLTGGGSGIGFEISLQLGKHGA--AIAIMGRRKTVLRSAVAALHSLGI---PAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 13 k~~lItGa~~giG~~~a~~l~~~G~--~v~l~~r~~~~~~~~~~~~~~~~~---~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
+.+.|+|+ |.||..+|..|+.+|. +++|+|.+++.++....++.+... .. -+..+ .+.+ .+
T Consensus 38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~-~i~~~-~dy~-----------~~ 103 (350)
T PLN02602 38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRT-KILAS-TDYA-----------VT 103 (350)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCC-EEEeC-CCHH-----------Hh
Confidence 68999996 8999999999998886 699999999888777777754321 12 22111 1211 22
Q ss_pred CCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccc
Q 025672 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL 158 (249)
Q Consensus 88 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~ 158 (249)
..-|+||..||... ++ ..+. .+.+..|+ .+++.+.+.+.+..+ .+.+++++...
T Consensus 104 ~daDiVVitAG~~~-k~--g~tR---~dll~~N~----~I~~~i~~~I~~~~p-------~~ivivvtNPv 157 (350)
T PLN02602 104 AGSDLCIVTAGARQ-IP--GESR---LNLLQRNV----ALFRKIIPELAKYSP-------DTILLIVSNPV 157 (350)
T ss_pred CCCCEEEECCCCCC-Cc--CCCH---HHHHHHHH----HHHHHHHHHHHHHCC-------CeEEEEecCch
Confidence 46799999999643 21 2233 33344554 455666666655433 37777777543
|
|
| >TIGR00715 precor6x_red precorrin-6x reductase | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.0014 Score=53.51 Aligned_cols=74 Identities=19% Similarity=0.177 Sum_probs=55.4
Q ss_pred cEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCccE
Q 025672 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI 92 (249)
Q Consensus 13 k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ 92 (249)
+++||+|||+- |+.++++|.++|++|+.+.++....+.+.. .+ ...+..+..|.+++.+++.+ ..+|+
T Consensus 1 m~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~~----~g--~~~v~~g~l~~~~l~~~l~~-----~~i~~ 68 (256)
T TIGR00715 1 MTVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYPI----HQ--ALTVHTGALDPQELREFLKR-----HSIDI 68 (256)
T ss_pred CeEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCccccccc----cC--CceEEECCCCHHHHHHHHHh-----cCCCE
Confidence 36899999998 999999999999999998888764333221 11 22355677788887777754 37999
Q ss_pred EEEcCC
Q 025672 93 LVNAAA 98 (249)
Q Consensus 93 vi~~ag 98 (249)
||+.+.
T Consensus 69 VIDAtH 74 (256)
T TIGR00715 69 LVDATH 74 (256)
T ss_pred EEEcCC
Confidence 999876
|
This enzyme was found to be a monomer by gel filtration. |
| >PRK08762 molybdopterin biosynthesis protein MoeB; Validated | Back alignment and domain information |
|---|
Probab=97.20 E-value=0.0032 Score=54.58 Aligned_cols=81 Identities=22% Similarity=0.355 Sum_probs=53.3
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCC-eEEEEeCC-------------------cchHHHHHHHHHhcCCCe--eEE
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRR-------------------KTVLRSAVAALHSLGIPA--IGL 66 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~-~v~l~~r~-------------------~~~~~~~~~~~~~~~~~~--~~~ 66 (249)
.+++++|+|.|+ ||+|..++..|+..|. +++++|++ ..+.+.+++.+.+.+..+ ..+
T Consensus 132 ~l~~~~VlvvG~-GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~ 210 (376)
T PRK08762 132 RLLEARVLLIGA-GGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDVQVEAV 210 (376)
T ss_pred HHhcCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCCEEEEE
Confidence 367888999966 7999999999999998 69999987 344555666665544433 333
Q ss_pred EccCCCHHHHHHHHHHHHHHhCCccEEEEcCC
Q 025672 67 EGDVRKREDAVRVVESTINHFGKLDILVNAAA 98 (249)
Q Consensus 67 ~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag 98 (249)
...+++ +.+..++ ...|+||++..
T Consensus 211 ~~~~~~-~~~~~~~-------~~~D~Vv~~~d 234 (376)
T PRK08762 211 QERVTS-DNVEALL-------QDVDVVVDGAD 234 (376)
T ss_pred eccCCh-HHHHHHH-------hCCCEEEECCC
Confidence 333332 2333332 24678777664
|
|
| >TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit | Back alignment and domain information |
|---|
Probab=97.17 E-value=0.005 Score=55.05 Aligned_cols=84 Identities=20% Similarity=0.181 Sum_probs=58.2
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCC-------------HHH
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK-------------RED 75 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-------------~~~ 75 (249)
.+.+.+++|.|+ |.+|...+..+...|++|++++++.++++...+ + | ..++..|..+ .+.
T Consensus 161 ~vp~akVlViGa-G~iGl~Aa~~ak~lGA~V~v~d~~~~rle~a~~-l---G--a~~v~v~~~e~g~~~~gYa~~~s~~~ 233 (511)
T TIGR00561 161 KVPPAKVLVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQS-M---G--AEFLELDFKEEGGSGDGYAKVMSEEF 233 (511)
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-c---C--CeEEeccccccccccccceeecCHHH
Confidence 345789999996 799999999999999999999998886554332 3 3 3344555422 233
Q ss_pred HHHHHHHHHHHhCCccEEEEcCCC
Q 025672 76 AVRVVESTINHFGKLDILVNAAAG 99 (249)
Q Consensus 76 ~~~~~~~~~~~~~~id~vi~~ag~ 99 (249)
.+...+.+.+.....|++|+++-+
T Consensus 234 ~~~~~~~~~e~~~~~DIVI~Tali 257 (511)
T TIGR00561 234 IAAEMELFAAQAKEVDIIITTALI 257 (511)
T ss_pred HHHHHHHHHHHhCCCCEEEECccc
Confidence 333344444556789999999844
|
In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff. |
| >cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=97.16 E-value=0.0015 Score=54.99 Aligned_cols=75 Identities=24% Similarity=0.383 Sum_probs=51.4
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCc
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 90 (249)
.+.+++|+|+++++|.++++.+...|.+|+.+.++.++.+.+ ...+.. .++ |. +++...+ .....+
T Consensus 162 ~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~----~~~~~~-~~~--~~---~~~~~~~----~~~~~~ 227 (332)
T cd08259 162 KGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKIL----KELGAD-YVI--DG---SKFSEDV----KKLGGA 227 (332)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHH----HHcCCc-EEE--ec---HHHHHHH----HhccCC
Confidence 478999999999999999999999999999998877655443 222321 122 22 1222222 223479
Q ss_pred cEEEEcCCC
Q 025672 91 DILVNAAAG 99 (249)
Q Consensus 91 d~vi~~ag~ 99 (249)
|++++++|.
T Consensus 228 d~v~~~~g~ 236 (332)
T cd08259 228 DVVIELVGS 236 (332)
T ss_pred CEEEECCCh
Confidence 999999873
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. |
| >PRK05690 molybdopterin biosynthesis protein MoeB; Provisional | Back alignment and domain information |
|---|
Probab=97.15 E-value=0.0054 Score=49.88 Aligned_cols=37 Identities=24% Similarity=0.363 Sum_probs=32.5
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCC-eEEEEeCCc
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRK 46 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~-~v~l~~r~~ 46 (249)
.+++++|+|.|+ ||+|..+++.|+..|. ++.++|.+.
T Consensus 29 ~L~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~ 66 (245)
T PRK05690 29 KLKAARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFDT 66 (245)
T ss_pred HhcCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCE
Confidence 467899999998 8999999999999998 788888753
|
|
| >cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family | Back alignment and domain information |
|---|
Probab=97.15 E-value=0.0032 Score=51.78 Aligned_cols=117 Identities=15% Similarity=0.206 Sum_probs=70.0
Q ss_pred EEEecCCCchhHHHHHHHHHcC----CeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCc
Q 025672 15 ALLTGGGSGIGFEISLQLGKHG----AAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (249)
Q Consensus 15 ~lItGa~~giG~~~a~~l~~~G----~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 90 (249)
+.|+|++|.+|..++..|+..| .+|+++|.++++++....++.+.-... ....++-.++.... +..-
T Consensus 1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~--~~~~i~~~~d~~~~-------~~~a 71 (263)
T cd00650 1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPL--ADIKVSITDDPYEA-------FKDA 71 (263)
T ss_pred CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhc--cCcEEEECCchHHH-------hCCC
Confidence 4689998899999999999999 689999999988888777775432211 01111111122222 3468
Q ss_pred cEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccc
Q 025672 91 DILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISAT 157 (249)
Q Consensus 91 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~ 157 (249)
|+||..+|..... ..+. ...+..| .-+.+.+.+.+.+..+ .+.++++|..
T Consensus 72 DiVv~t~~~~~~~---g~~r---~~~~~~n----~~i~~~i~~~i~~~~p-------~a~~i~~tNP 121 (263)
T cd00650 72 DVVIITAGVGRKP---GMGR---LDLLKRN----VPIVKEIGDNIEKYSP-------DAWIIVVSNP 121 (263)
T ss_pred CEEEECCCCCCCc---CCCH---HHHHHHH----HHHHHHHHHHHHHHCC-------CeEEEEecCc
Confidence 9999999864321 1122 2222333 3445555555554433 3566666543
|
Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains |
| >PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.01 Score=53.18 Aligned_cols=86 Identities=19% Similarity=0.218 Sum_probs=56.7
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHH------------HH
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKRE------------DA 76 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~------------~~ 76 (249)
...+.+|+|+|+. .+|...+..+...|++|+++|++.++++...+ + |.+ ++..|..+.+ +.
T Consensus 162 ~~pg~kVlViGaG-~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~aes-l---GA~--~v~i~~~e~~~~~~gya~~~s~~~ 234 (509)
T PRK09424 162 KVPPAKVLVIGAG-VAGLAAIGAAGSLGAIVRAFDTRPEVAEQVES-M---GAE--FLELDFEEEGGSGDGYAKVMSEEF 234 (509)
T ss_pred CcCCCEEEEECCc-HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-c---CCe--EEEeccccccccccchhhhcchhH
Confidence 3568999999875 99999999999999999999999887665443 3 443 2323433211 11
Q ss_pred HHH-HHHHHHHhCCccEEEEcCCCCC
Q 025672 77 VRV-VESTINHFGKLDILVNAAAGNF 101 (249)
Q Consensus 77 ~~~-~~~~~~~~~~id~vi~~ag~~~ 101 (249)
.+. .+.+.+..+..|++|.++|...
T Consensus 235 ~~~~~~~~~~~~~gaDVVIetag~pg 260 (509)
T PRK09424 235 IKAEMALFAEQAKEVDIIITTALIPG 260 (509)
T ss_pred HHHHHHHHHhccCCCCEEEECCCCCc
Confidence 111 2222222356999999999643
|
|
| >TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.0026 Score=53.77 Aligned_cols=79 Identities=8% Similarity=0.142 Sum_probs=53.9
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCc
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 90 (249)
.|.++||+|++|++|..++..+...|++|+.+.++.++.+.+ .++ |... ++ |-.+.+.+.+.+.... -+.+
T Consensus 138 ~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~-~~l---Ga~~-vi--~~~~~~~~~~~~~~~~--~~gv 208 (325)
T TIGR02825 138 GGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYL-KKL---GFDV-AF--NYKTVKSLEETLKKAS--PDGY 208 (325)
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHc---CCCE-EE--eccccccHHHHHHHhC--CCCe
Confidence 578999999999999999888888999999998887765554 233 4322 22 3333333444443332 1369
Q ss_pred cEEEEcCC
Q 025672 91 DILVNAAA 98 (249)
Q Consensus 91 d~vi~~ag 98 (249)
|+++.+.|
T Consensus 209 dvv~d~~G 216 (325)
T TIGR02825 209 DCYFDNVG 216 (325)
T ss_pred EEEEECCC
Confidence 99999887
|
Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase. |
| >TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.0025 Score=53.07 Aligned_cols=43 Identities=19% Similarity=0.252 Sum_probs=37.5
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHH
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRS 51 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~ 51 (249)
..+++|+++|+|. |++|+.+++.|...|++|++++|+.++.+.
T Consensus 147 ~~l~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~~ 189 (287)
T TIGR02853 147 FTIHGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLAR 189 (287)
T ss_pred CCCCCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence 4678999999998 679999999999999999999998765443
|
This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA. |
| >PRK00045 hemA glutamyl-tRNA reductase; Reviewed | Back alignment and domain information |
|---|
Probab=97.13 E-value=0.0024 Score=56.24 Aligned_cols=73 Identities=16% Similarity=0.279 Sum_probs=53.4
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
++.+++++|.|+ |.+|..+++.|...|+ +|++++|+.++.+.+++++. . +..+.+++...+
T Consensus 179 ~~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g---~-------~~~~~~~~~~~l------- 240 (423)
T PRK00045 179 DLSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEEFG---G-------EAIPLDELPEAL------- 240 (423)
T ss_pred CccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcC---C-------cEeeHHHHHHHh-------
Confidence 478899999987 8999999999999998 79999999888777776652 1 111223332222
Q ss_pred CCccEEEEcCCC
Q 025672 88 GKLDILVNAAAG 99 (249)
Q Consensus 88 ~~id~vi~~ag~ 99 (249)
...|+||.+.+.
T Consensus 241 ~~aDvVI~aT~s 252 (423)
T PRK00045 241 AEADIVISSTGA 252 (423)
T ss_pred ccCCEEEECCCC
Confidence 357899988764
|
|
| >PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins | Back alignment and domain information |
|---|
Probab=97.12 E-value=0.0018 Score=47.00 Aligned_cols=96 Identities=16% Similarity=0.101 Sum_probs=53.3
Q ss_pred CCCCCCCCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEE-eCCcchHHHHHHHHHhc--------CCCeeEEEccCC
Q 025672 1 MESPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIM-GRRKTVLRSAVAALHSL--------GIPAIGLEGDVR 71 (249)
Q Consensus 1 ~~~~~~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~-~r~~~~~~~~~~~~~~~--------~~~~~~~~~Dl~ 71 (249)
|+.|.... ..-++-|+|+ |.+|.++++.|.+.|++|..+ +|+.+..+++...+... -....++-+-+.
T Consensus 1 ~~~~~~~~--~~l~I~iIGa-GrVG~~La~aL~~ag~~v~~v~srs~~sa~~a~~~~~~~~~~~~~~~~~~aDlv~iavp 77 (127)
T PF10727_consen 1 MNTPATQA--ARLKIGIIGA-GRVGTALARALARAGHEVVGVYSRSPASAERAAAFIGAGAILDLEEILRDADLVFIAVP 77 (127)
T ss_dssp -------------EEEEECT-SCCCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC--TT-----TTGGGCC-SEEEE-S-
T ss_pred CCccccCC--CccEEEEECC-CHHHHHHHHHHHHCCCeEEEEEeCCcccccccccccccccccccccccccCCEEEEEec
Confidence 66664433 2567889988 799999999999999998765 56665566665554211 112334444555
Q ss_pred CHHHHHHHHHHHHHH--hCCccEEEEcCCCC
Q 025672 72 KREDAVRVVESTINH--FGKLDILVNAAAGN 100 (249)
Q Consensus 72 ~~~~~~~~~~~~~~~--~~~id~vi~~ag~~ 100 (249)
|. .+..+.+++... ..+=.+|+|+.|..
T Consensus 78 Dd-aI~~va~~La~~~~~~~g~iVvHtSGa~ 107 (127)
T PF10727_consen 78 DD-AIAEVAEQLAQYGAWRPGQIVVHTSGAL 107 (127)
T ss_dssp CC-HHHHHHHHHHCC--S-TT-EEEES-SS-
T ss_pred hH-HHHHHHHHHHHhccCCCCcEEEECCCCC
Confidence 54 788888887654 33346899999954
|
This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A. |
| >cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=97.11 E-value=0.0079 Score=48.88 Aligned_cols=79 Identities=22% Similarity=0.322 Sum_probs=53.8
Q ss_pred CCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCC
Q 025672 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK 89 (249)
Q Consensus 10 l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 89 (249)
.++.+++|+|+++ +|..++..+...|.+|+++++++++.+.+ .++ +.. .+ .|..+.+..+.+. ....+.
T Consensus 133 ~~~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~---g~~-~~--~~~~~~~~~~~~~---~~~~~~ 201 (271)
T cd05188 133 KPGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLELA-KEL---GAD-HV--IDYKEEDLEEELR---LTGGGG 201 (271)
T ss_pred CCCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHHHH-HHh---CCc-ee--ccCCcCCHHHHHH---HhcCCC
Confidence 3578999999998 99999999999999999999887655443 222 221 12 2444443433333 222357
Q ss_pred ccEEEEcCCC
Q 025672 90 LDILVNAAAG 99 (249)
Q Consensus 90 id~vi~~ag~ 99 (249)
+|+++++++.
T Consensus 202 ~d~vi~~~~~ 211 (271)
T cd05188 202 ADVVIDAVGG 211 (271)
T ss_pred CCEEEECCCC
Confidence 9999999873
|
The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro |
| >COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=97.10 E-value=0.0049 Score=53.43 Aligned_cols=74 Identities=20% Similarity=0.346 Sum_probs=57.6
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
+++++++||.|++ -+|.-+|++|.++|. +|+++.|+.++.+++++++. .+....+++...+
T Consensus 175 ~L~~~~vlvIGAG-em~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~----------~~~~~l~el~~~l------- 236 (414)
T COG0373 175 SLKDKKVLVIGAG-EMGELVAKHLAEKGVKKITIANRTLERAEELAKKLG----------AEAVALEELLEAL------- 236 (414)
T ss_pred ccccCeEEEEccc-HHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhC----------CeeecHHHHHHhh-------
Confidence 3789999999975 899999999999995 79999999999999999885 1333334444443
Q ss_pred CCccEEEEcCCCC
Q 025672 88 GKLDILVNAAAGN 100 (249)
Q Consensus 88 ~~id~vi~~ag~~ 100 (249)
...|+||.+.|..
T Consensus 237 ~~~DvVissTsa~ 249 (414)
T COG0373 237 AEADVVISSTSAP 249 (414)
T ss_pred hhCCEEEEecCCC
Confidence 3578998887743
|
|
| >COG2130 Putative NADP-dependent oxidoreductases [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.08 E-value=0.0036 Score=51.57 Aligned_cols=79 Identities=10% Similarity=0.131 Sum_probs=56.1
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh-CC
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF-GK 89 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~~ 89 (249)
.|.|++|++|+|.+|.-+..--.-+|++|+.+.-.+++..-+.+++.- . .-.|-..+ ++.+ .+.+.. ..
T Consensus 150 ~GetvvVSaAaGaVGsvvgQiAKlkG~rVVGiaGg~eK~~~l~~~lGf---D---~~idyk~~-d~~~---~L~~a~P~G 219 (340)
T COG2130 150 AGETVVVSAAAGAVGSVVGQIAKLKGCRVVGIAGGAEKCDFLTEELGF---D---AGIDYKAE-DFAQ---ALKEACPKG 219 (340)
T ss_pred CCCEEEEEecccccchHHHHHHHhhCCeEEEecCCHHHHHHHHHhcCC---c---eeeecCcc-cHHH---HHHHHCCCC
Confidence 589999999999999877665557899999999888877777766631 1 11244444 3333 333333 47
Q ss_pred ccEEEEcCCC
Q 025672 90 LDILVNAAAG 99 (249)
Q Consensus 90 id~vi~~ag~ 99 (249)
||+.+-|.|.
T Consensus 220 IDvyfeNVGg 229 (340)
T COG2130 220 IDVYFENVGG 229 (340)
T ss_pred eEEEEEcCCc
Confidence 9999999994
|
|
| >PTZ00117 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.07 E-value=0.006 Score=51.62 Aligned_cols=119 Identities=16% Similarity=0.230 Sum_probs=71.8
Q ss_pred CCCcEEEEecCCCchhHHHHHHHHHcC-CeEEEEeCCcchHHHHHHHHHhcCC---CeeEEEccCCCHHHHHHHHHHHHH
Q 025672 10 LKGKVALLTGGGSGIGFEISLQLGKHG-AAIAIMGRRKTVLRSAVAALHSLGI---PAIGLEGDVRKREDAVRVVESTIN 85 (249)
Q Consensus 10 l~~k~~lItGa~~giG~~~a~~l~~~G-~~v~l~~r~~~~~~~~~~~~~~~~~---~~~~~~~Dl~~~~~~~~~~~~~~~ 85 (249)
.+.+.+.|+|+ |.+|..++..++..| .+++++|.+++.++...-++..... ....+.. -+| .+
T Consensus 3 ~~~~KI~IIGa-G~vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~lDl~~~~~~~~~~~~i~~-~~d---~~-------- 69 (319)
T PTZ00117 3 VKRKKISMIGA-GQIGSTVALLILQKNLGDVVLYDVIKGVPQGKALDLKHFSTLVGSNINILG-TNN---YE-------- 69 (319)
T ss_pred CCCcEEEEECC-CHHHHHHHHHHHHCCCCeEEEEECCCccchhHHHHHhhhccccCCCeEEEe-CCC---HH--------
Confidence 35678999997 889999999999999 6899999998765543333322111 0011111 112 22
Q ss_pred HhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccc
Q 025672 86 HFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL 158 (249)
Q Consensus 86 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~ 158 (249)
.+..-|+||.++|..... ..+. ...+..|. .+.+.+.+.+.+..+ .+.++++|...
T Consensus 70 ~l~~ADiVVitag~~~~~---g~~r---~dll~~n~----~i~~~i~~~i~~~~p-------~a~vivvsNP~ 125 (319)
T PTZ00117 70 DIKDSDVVVITAGVQRKE---EMTR---EDLLTING----KIMKSVAESVKKYCP-------NAFVICVTNPL 125 (319)
T ss_pred HhCCCCEEEECCCCCCCC---CCCH---HHHHHHHH----HHHHHHHHHHHHHCC-------CeEEEEecChH
Confidence 123569999999864321 1222 44555666 456666666665543 36577776544
|
|
| >cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=97.07 E-value=0.0032 Score=53.14 Aligned_cols=72 Identities=21% Similarity=0.325 Sum_probs=53.9
Q ss_pred CCCcEEEEecCCCchhHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhC
Q 025672 10 LKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (249)
Q Consensus 10 l~~k~~lItGa~~giG~~~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 88 (249)
+.+++++|.|+ |.+|..+++.|...|. +|++++|+.++.+.+++++. . ..+ +.+++...+ .
T Consensus 176 l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~g---~--~~~-----~~~~~~~~l-------~ 237 (311)
T cd05213 176 LKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEELAKELG---G--NAV-----PLDELLELL-------N 237 (311)
T ss_pred ccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcC---C--eEE-----eHHHHHHHH-------h
Confidence 68999999987 8999999999999775 69999999888887777763 2 122 223333333 2
Q ss_pred CccEEEEcCCC
Q 025672 89 KLDILVNAAAG 99 (249)
Q Consensus 89 ~id~vi~~ag~ 99 (249)
..|+||.+.+.
T Consensus 238 ~aDvVi~at~~ 248 (311)
T cd05213 238 EADVVISATGA 248 (311)
T ss_pred cCCEEEECCCC
Confidence 47999999884
|
Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, |
| >cd05293 LDH_1 A subgroup of L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=97.07 E-value=0.016 Score=48.94 Aligned_cols=116 Identities=9% Similarity=0.106 Sum_probs=74.1
Q ss_pred CcEEEEecCCCchhHHHHHHHHHcCC--eEEEEeCCcchHHHHHHHHHhcCC---CeeEEEccCCCHHHHHHHHHHHHHH
Q 025672 12 GKVALLTGGGSGIGFEISLQLGKHGA--AIAIMGRRKTVLRSAVAALHSLGI---PAIGLEGDVRKREDAVRVVESTINH 86 (249)
Q Consensus 12 ~k~~lItGa~~giG~~~a~~l~~~G~--~v~l~~r~~~~~~~~~~~~~~~~~---~~~~~~~Dl~~~~~~~~~~~~~~~~ 86 (249)
...+.|+|+ |.+|..+|..|+..|. +++|+|.+++.++....++.+... ...+... .|.+ .
T Consensus 3 ~~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~~--~dy~-----------~ 68 (312)
T cd05293 3 RNKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEAD--KDYS-----------V 68 (312)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEEC--CCHH-----------H
Confidence 357899996 9999999999998886 699999998877777777754321 1122211 1221 1
Q ss_pred hCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccc
Q 025672 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL 158 (249)
Q Consensus 87 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~ 158 (249)
+..-|+||.++|.... + ..+. ...++.|.- +++.+.+.+.+..+ .+.++++|...
T Consensus 69 ~~~adivvitaG~~~k-~--g~~R---~dll~~N~~----i~~~~~~~i~~~~p-------~~~vivvsNP~ 123 (312)
T cd05293 69 TANSKVVIVTAGARQN-E--GESR---LDLVQRNVD----IFKGIIPKLVKYSP-------NAILLVVSNPV 123 (312)
T ss_pred hCCCCEEEECCCCCCC-C--CCCH---HHHHHHHHH----HHHHHHHHHHHhCC-------CcEEEEccChH
Confidence 2467999999996432 2 2333 334555543 45555666655543 37788887654
|
L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >TIGR01035 hemA glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.0031 Score=55.45 Aligned_cols=73 Identities=26% Similarity=0.331 Sum_probs=53.2
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcC-CeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHG-AAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G-~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
++.+++++|.|+ |.+|..+++.|...| .+|++++|+.++.+.+++++. .. .+. .+++..++
T Consensus 177 ~l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g---~~--~i~-----~~~l~~~l------- 238 (417)
T TIGR01035 177 SLKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKELG---GE--AVK-----FEDLEEYL------- 238 (417)
T ss_pred CccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcC---Ce--Eee-----HHHHHHHH-------
Confidence 478899999997 999999999999999 589999999887776666542 11 221 12333333
Q ss_pred CCccEEEEcCCC
Q 025672 88 GKLDILVNAAAG 99 (249)
Q Consensus 88 ~~id~vi~~ag~ 99 (249)
...|+||.+.+.
T Consensus 239 ~~aDvVi~aT~s 250 (417)
T TIGR01035 239 AEADIVISSTGA 250 (417)
T ss_pred hhCCEEEECCCC
Confidence 257999998764
|
This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA. |
| >PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.0059 Score=52.08 Aligned_cols=37 Identities=24% Similarity=0.376 Sum_probs=33.0
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCC-eEEEEeCCc
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRK 46 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~-~v~l~~r~~ 46 (249)
.|+.++|+|.|+ ||+|..+++.|++.|. ++.++|.+.
T Consensus 21 ~L~~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D~ 58 (339)
T PRK07688 21 KLREKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRDY 58 (339)
T ss_pred HhcCCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCc
Confidence 467889999998 6999999999999999 799999863
|
|
| >PLN00203 glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=97.02 E-value=0.0038 Score=56.12 Aligned_cols=76 Identities=11% Similarity=0.224 Sum_probs=55.6
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
++.+++++|.|+ |++|..+++.|...|+ +|+++.|+.++.+.+.+++. +..+.+ ...++...++
T Consensus 263 ~l~~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~--g~~i~~-----~~~~dl~~al------- 327 (519)
T PLN00203 263 SHASARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFP--DVEIIY-----KPLDEMLACA------- 327 (519)
T ss_pred CCCCCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhC--CCceEe-----ecHhhHHHHH-------
Confidence 478999999999 9999999999999997 69999999988888877663 112222 1222333332
Q ss_pred CCccEEEEcCCC
Q 025672 88 GKLDILVNAAAG 99 (249)
Q Consensus 88 ~~id~vi~~ag~ 99 (249)
...|+||.+.+.
T Consensus 328 ~~aDVVIsAT~s 339 (519)
T PLN00203 328 AEADVVFTSTSS 339 (519)
T ss_pred hcCCEEEEccCC
Confidence 357999988764
|
|
| >COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.0028 Score=50.84 Aligned_cols=74 Identities=16% Similarity=0.265 Sum_probs=56.0
Q ss_pred cEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHH-HHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCcc
Q 025672 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVA-ALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD 91 (249)
Q Consensus 13 k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~-~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 91 (249)
+.++|.|+ |-+|+.+|+.|.++|++|++++++++..++... ++ .++.+.+|-++++.++++=- ...|
T Consensus 1 m~iiIiG~-G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~~~-----~~~~v~gd~t~~~~L~~agi------~~aD 68 (225)
T COG0569 1 MKIIIIGA-GRVGRSVARELSEEGHNVVLIDRDEERVEEFLADEL-----DTHVVIGDATDEDVLEEAGI------DDAD 68 (225)
T ss_pred CEEEEECC-cHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhhhc-----ceEEEEecCCCHHHHHhcCC------CcCC
Confidence 35666665 589999999999999999999999988766332 33 46788889999888777611 2567
Q ss_pred EEEEcCC
Q 025672 92 ILVNAAA 98 (249)
Q Consensus 92 ~vi~~ag 98 (249)
++|-..|
T Consensus 69 ~vva~t~ 75 (225)
T COG0569 69 AVVAATG 75 (225)
T ss_pred EEEEeeC
Confidence 7777666
|
|
| >cd08293 PTGR2 Prostaglandin reductase | Back alignment and domain information |
|---|
Probab=97.00 E-value=0.0042 Score=52.89 Aligned_cols=77 Identities=9% Similarity=0.148 Sum_probs=52.8
Q ss_pred cEEEEecCCCchhHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCcc
Q 025672 13 KVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD 91 (249)
Q Consensus 13 k~~lItGa~~giG~~~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 91 (249)
.++||+|++|++|..++..+...|+ +|+.+++++++.+.+.+++ |... ++ |..+ +++.+.+.+... +.+|
T Consensus 156 ~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~l---Ga~~-vi--~~~~-~~~~~~i~~~~~--~gvd 226 (345)
T cd08293 156 QTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSEL---GFDA-AI--NYKT-DNVAERLRELCP--EGVD 226 (345)
T ss_pred CEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhc---CCcE-EE--ECCC-CCHHHHHHHHCC--CCce
Confidence 8999999999999999888888898 7999988877766665544 3322 22 3222 223333333221 4699
Q ss_pred EEEEcCC
Q 025672 92 ILVNAAA 98 (249)
Q Consensus 92 ~vi~~ag 98 (249)
+++.+.|
T Consensus 227 ~vid~~g 233 (345)
T cd08293 227 VYFDNVG 233 (345)
T ss_pred EEEECCC
Confidence 9999887
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid |
| >cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase | Back alignment and domain information |
|---|
Probab=96.99 E-value=0.0048 Score=51.43 Aligned_cols=79 Identities=24% Similarity=0.337 Sum_probs=54.6
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCc
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 90 (249)
++++++|+|+++++|..++..+...|++|++++++.++.+.+ .++ +.. ...|..+.+..+.+.... . .+++
T Consensus 139 ~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~---g~~---~~~~~~~~~~~~~~~~~~-~-~~~~ 209 (323)
T cd05276 139 AGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLEAC-RAL---GAD---VAINYRTEDFAEEVKEAT-G-GRGV 209 (323)
T ss_pred CCCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHc---CCC---EEEeCCchhHHHHHHHHh-C-CCCe
Confidence 578999999999999999999999999999999887665544 222 322 123444433333333221 1 1469
Q ss_pred cEEEEcCC
Q 025672 91 DILVNAAA 98 (249)
Q Consensus 91 d~vi~~ag 98 (249)
|.++++.|
T Consensus 210 d~vi~~~g 217 (323)
T cd05276 210 DVILDMVG 217 (323)
T ss_pred EEEEECCc
Confidence 99999988
|
PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding |
| >PRK08644 thiamine biosynthesis protein ThiF; Provisional | Back alignment and domain information |
|---|
Probab=96.95 E-value=0.0073 Score=47.99 Aligned_cols=37 Identities=22% Similarity=0.401 Sum_probs=32.2
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCC-eEEEEeCCc
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRK 46 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~-~v~l~~r~~ 46 (249)
.++.++++|.|+ ||+|..+++.|++.|. +++++|.+.
T Consensus 25 ~L~~~~V~ViG~-GglGs~ia~~La~~Gvg~i~lvD~D~ 62 (212)
T PRK08644 25 KLKKAKVGIAGA-GGLGSNIAVALARSGVGNLKLVDFDV 62 (212)
T ss_pred HHhCCCEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence 367889999996 6999999999999998 599999873
|
|
| >KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only] | Back alignment and domain information |
|---|
Probab=96.92 E-value=0.008 Score=51.40 Aligned_cols=80 Identities=23% Similarity=0.265 Sum_probs=53.0
Q ss_pred CCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCC
Q 025672 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK 89 (249)
Q Consensus 10 l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 89 (249)
-+|+.+||.||++|+|.+.+.-....|+..+++.++.+. .++.+++ |.. ...|..+++-++..-... .++
T Consensus 156 ~~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~-~~l~k~l---GAd---~vvdy~~~~~~e~~kk~~---~~~ 225 (347)
T KOG1198|consen 156 SKGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEK-LELVKKL---GAD---EVVDYKDENVVELIKKYT---GKG 225 (347)
T ss_pred CCCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccch-HHHHHHc---CCc---EeecCCCHHHHHHHHhhc---CCC
Confidence 358899999999999999998888889544444445443 3444444 322 223777743333332221 568
Q ss_pred ccEEEEcCCC
Q 025672 90 LDILVNAAAG 99 (249)
Q Consensus 90 id~vi~~ag~ 99 (249)
+|+|+-|.|.
T Consensus 226 ~DvVlD~vg~ 235 (347)
T KOG1198|consen 226 VDVVLDCVGG 235 (347)
T ss_pred ccEEEECCCC
Confidence 9999999995
|
|
| >cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase | Back alignment and domain information |
|---|
Probab=96.90 E-value=0.0028 Score=48.34 Aligned_cols=39 Identities=18% Similarity=0.247 Sum_probs=34.8
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCc
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK 46 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~ 46 (249)
.++++|+++|+|++.-+|..+++.|.++|++|+++.|+.
T Consensus 40 ~~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~ 78 (168)
T cd01080 40 IDLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKT 78 (168)
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCc
Confidence 468999999999966679999999999999999999874
|
NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a |
| >PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus | Back alignment and domain information |
|---|
Probab=96.90 E-value=0.0042 Score=44.09 Aligned_cols=71 Identities=24% Similarity=0.264 Sum_probs=53.0
Q ss_pred EEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCccEEE
Q 025672 15 ALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILV 94 (249)
Q Consensus 15 ~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi 94 (249)
++|.|. +.+|+.+++.|.+.+.+|++++++++..+.+. ..+ +.++.+|.++++.++++- ....+.+|
T Consensus 1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~----~~~--~~~i~gd~~~~~~l~~a~------i~~a~~vv 67 (116)
T PF02254_consen 1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRDPERVEELR----EEG--VEVIYGDATDPEVLERAG------IEKADAVV 67 (116)
T ss_dssp EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHHHHHHH----HTT--SEEEES-TTSHHHHHHTT------GGCESEEE
T ss_pred eEEEcC-CHHHHHHHHHHHhCCCEEEEEECCcHHHHHHH----hcc--cccccccchhhhHHhhcC------ccccCEEE
Confidence 467776 47999999999997779999999987655443 223 778999999999988762 13677777
Q ss_pred EcCC
Q 025672 95 NAAA 98 (249)
Q Consensus 95 ~~ag 98 (249)
....
T Consensus 68 ~~~~ 71 (116)
T PF02254_consen 68 ILTD 71 (116)
T ss_dssp EESS
T ss_pred EccC
Confidence 7665
|
The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A .... |
| >PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.89 E-value=0.004 Score=51.66 Aligned_cols=39 Identities=26% Similarity=0.324 Sum_probs=35.2
Q ss_pred CCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCC
Q 025672 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR 45 (249)
Q Consensus 7 ~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~ 45 (249)
...++||.++|.|+++-+|+.++..|.++|++|+++.|+
T Consensus 154 ~i~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~ 192 (283)
T PRK14192 154 NIELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSR 192 (283)
T ss_pred CCCCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCC
Confidence 356899999999999889999999999999999998874
|
|
| >PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ] | Back alignment and domain information |
|---|
Probab=96.88 E-value=0.011 Score=42.78 Aligned_cols=76 Identities=12% Similarity=0.189 Sum_probs=54.9
Q ss_pred EEEEecCCCchhHHHHHHHHH-cCCeEE-EEeCCc----------------------chHHHHHHHHHhcCCCeeEEEcc
Q 025672 14 VALLTGGGSGIGFEISLQLGK-HGAAIA-IMGRRK----------------------TVLRSAVAALHSLGIPAIGLEGD 69 (249)
Q Consensus 14 ~~lItGa~~giG~~~a~~l~~-~G~~v~-l~~r~~----------------------~~~~~~~~~~~~~~~~~~~~~~D 69 (249)
++.|.|++|.+|+.+++.+.+ .|.+++ .++|+. +.++++.++ .. +-.|
T Consensus 2 rV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v~~~l~~~~~~-----~D---VvID 73 (124)
T PF01113_consen 2 RVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPVTDDLEELLEE-----AD---VVID 73 (124)
T ss_dssp EEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBEBS-HHHHTTH------S---EEEE
T ss_pred EEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCcccccchhHHHhccc-----CC---EEEE
Confidence 589999999999999999999 677755 466665 223333222 12 5569
Q ss_pred CCCHHHHHHHHHHHHHHhCCccEEEEcCCC
Q 025672 70 VRKREDAVRVVESTINHFGKLDILVNAAAG 99 (249)
Q Consensus 70 l~~~~~~~~~~~~~~~~~~~id~vi~~ag~ 99 (249)
+|.++.+...++.+.+. ++.+|+-..|+
T Consensus 74 fT~p~~~~~~~~~~~~~--g~~~ViGTTG~ 101 (124)
T PF01113_consen 74 FTNPDAVYDNLEYALKH--GVPLVIGTTGF 101 (124)
T ss_dssp ES-HHHHHHHHHHHHHH--T-EEEEE-SSS
T ss_pred cCChHHhHHHHHHHHhC--CCCEEEECCCC
Confidence 99999999999988777 68899988884
|
In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A .... |
| >PRK09496 trkA potassium transporter peripheral membrane component; Reviewed | Back alignment and domain information |
|---|
Probab=96.88 E-value=0.0045 Score=54.94 Aligned_cols=59 Identities=12% Similarity=0.249 Sum_probs=43.8
Q ss_pred EEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHH
Q 025672 14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVR 78 (249)
Q Consensus 14 ~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~ 78 (249)
.++|.|+ |.+|+.+++.|.++|+.|++++++.+..+.+.+.. .+.++.+|.++.+.+++
T Consensus 2 ~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~~~~-----~~~~~~gd~~~~~~l~~ 60 (453)
T PRK09496 2 KIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEERLRRLQDRL-----DVRTVVGNGSSPDVLRE 60 (453)
T ss_pred EEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhhc-----CEEEEEeCCCCHHHHHH
Confidence 5788887 89999999999999999999999988766654321 24455556665554433
|
|
| >PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP | Back alignment and domain information |
|---|
Probab=96.87 E-value=0.013 Score=42.88 Aligned_cols=78 Identities=21% Similarity=0.453 Sum_probs=52.1
Q ss_pred CcEEEEecCCCchhHHHHHHHHHcCC-eEEEEeCC-------------------cchHHHHHHHHHhcC--CCeeEEEcc
Q 025672 12 GKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRR-------------------KTVLRSAVAALHSLG--IPAIGLEGD 69 (249)
Q Consensus 12 ~k~~lItGa~~giG~~~a~~l~~~G~-~v~l~~r~-------------------~~~~~~~~~~~~~~~--~~~~~~~~D 69 (249)
+++++|.|++ ++|..+++.|+..|. ++.++|.+ ..+.+.+++.+...+ .++..+..+
T Consensus 2 ~~~v~iiG~G-~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~ 80 (135)
T PF00899_consen 2 NKRVLIIGAG-GVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEK 80 (135)
T ss_dssp T-EEEEESTS-HHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESH
T ss_pred CCEEEEECcC-HHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeecc
Confidence 5788888865 999999999999999 69998863 224455566665543 345566666
Q ss_pred CCCHHHHHHHHHHHHHHhCCccEEEEcCC
Q 025672 70 VRKREDAVRVVESTINHFGKLDILVNAAA 98 (249)
Q Consensus 70 l~~~~~~~~~~~~~~~~~~~id~vi~~ag 98 (249)
+ +.+....+++ ..|+||.+..
T Consensus 81 ~-~~~~~~~~~~-------~~d~vi~~~d 101 (135)
T PF00899_consen 81 I-DEENIEELLK-------DYDIVIDCVD 101 (135)
T ss_dssp C-SHHHHHHHHH-------TSSEEEEESS
T ss_pred c-cccccccccc-------CCCEEEEecC
Confidence 6 3344555542 4688887654
|
Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A .... |
| >PRK05597 molybdopterin biosynthesis protein MoeB; Validated | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.013 Score=50.47 Aligned_cols=37 Identities=24% Similarity=0.324 Sum_probs=32.2
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCC-eEEEEeCCc
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRK 46 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~-~v~l~~r~~ 46 (249)
.+++++|+|.|+ ||+|..+++.|+..|. ++.++|.+.
T Consensus 25 ~L~~~~VlivG~-GGlGs~~a~~La~~Gvg~i~lvD~D~ 62 (355)
T PRK05597 25 SLFDAKVAVIGA-GGLGSPALLYLAGAGVGHITIIDDDT 62 (355)
T ss_pred HHhCCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence 367899999988 6999999999999998 699988753
|
|
| >cd00300 LDH_like L-lactate dehydrogenase-like enzymes | Back alignment and domain information |
|---|
Probab=96.83 E-value=0.032 Score=46.81 Aligned_cols=116 Identities=16% Similarity=0.166 Sum_probs=71.6
Q ss_pred EEEecCCCchhHHHHHHHHHcC--CeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCccE
Q 025672 15 ALLTGGGSGIGFEISLQLGKHG--AAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI 92 (249)
Q Consensus 15 ~lItGa~~giG~~~a~~l~~~G--~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ 92 (249)
+.|.|+ |++|..++..|+.+| .+++++|++++.++....++.+............++. . +.+..-|+
T Consensus 1 i~iiGa-G~VG~~~a~~l~~~~~~~el~l~D~~~~~~~g~~~DL~~~~~~~~~~~i~~~~~--~--------~~l~~aDi 69 (300)
T cd00300 1 ITIIGA-GNVGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHASAFLATGTIVRGGD--Y--------ADAADADI 69 (300)
T ss_pred CEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHhHHHhccccCCCeEEECCC--H--------HHhCCCCE
Confidence 357887 679999999999999 5799999999988888877765422111111111111 1 12246799
Q ss_pred EEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccc
Q 025672 93 LVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL 158 (249)
Q Consensus 93 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~ 158 (249)
+|.++|.... + ..+. ...+..|+ .+++.+.+.+.+..+ .+.++++|...
T Consensus 70 VIitag~p~~-~--~~~R---~~l~~~n~----~i~~~~~~~i~~~~p-------~~~viv~sNP~ 118 (300)
T cd00300 70 VVITAGAPRK-P--GETR---LDLINRNA----PILRSVITNLKKYGP-------DAIILVVSNPV 118 (300)
T ss_pred EEEcCCCCCC-C--CCCH---HHHHHHHH----HHHHHHHHHHHHhCC-------CeEEEEccChH
Confidence 9999996432 1 1232 33344444 455566666655443 37788877644
|
Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot |
| >PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=96.82 E-value=0.0098 Score=52.74 Aligned_cols=78 Identities=22% Similarity=0.237 Sum_probs=52.1
Q ss_pred CCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCC
Q 025672 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK 89 (249)
Q Consensus 10 l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 89 (249)
+++|+++|+|.+ ++|.++|+.|+++|++|++.+.+... ...+++......+.+...... .. . +..
T Consensus 3 ~~~~~~~v~G~g-~~G~~~a~~l~~~g~~v~~~d~~~~~--~~~~~l~~~~~gi~~~~g~~~-~~----~-------~~~ 67 (445)
T PRK04308 3 FQNKKILVAGLG-GTGISMIAYLRKNGAEVAAYDAELKP--ERVAQIGKMFDGLVFYTGRLK-DA----L-------DNG 67 (445)
T ss_pred CCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCCCc--hhHHHHhhccCCcEEEeCCCC-HH----H-------HhC
Confidence 678999999986 99999999999999999999876543 112234332123444333222 11 1 135
Q ss_pred ccEEEEcCCCCCC
Q 025672 90 LDILVNAAAGNFL 102 (249)
Q Consensus 90 id~vi~~ag~~~~ 102 (249)
.|.||..+|+.+.
T Consensus 68 ~d~vv~spgi~~~ 80 (445)
T PRK04308 68 FDILALSPGISER 80 (445)
T ss_pred CCEEEECCCCCCC
Confidence 7999999998653
|
|
| >TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent | Back alignment and domain information |
|---|
Probab=96.81 E-value=0.018 Score=48.46 Aligned_cols=118 Identities=15% Similarity=0.177 Sum_probs=70.2
Q ss_pred EEEEecCCCchhHHHHHHHHHcCC--eEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCcc
Q 025672 14 VALLTGGGSGIGFEISLQLGKHGA--AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD 91 (249)
Q Consensus 14 ~~lItGa~~giG~~~a~~l~~~G~--~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 91 (249)
++.|+|++|.||..+|..|+.+|. +++|+|+++ .+....++.+......+..+. +.++ ..+.+..-|
T Consensus 1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~--a~g~a~DL~~~~~~~~i~~~~--~~~~-------~~~~~~daD 69 (312)
T TIGR01772 1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAG--AAGVAADLSHIPTAASVKGFS--GEEG-------LENALKGAD 69 (312)
T ss_pred CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCC--CcEEEchhhcCCcCceEEEec--CCCc-------hHHHcCCCC
Confidence 368999999999999999999886 699999877 222222232211111111101 0011 123345789
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccc
Q 025672 92 ILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH 159 (249)
Q Consensus 92 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~ 159 (249)
+||.++|... .+ ..+ -.+.+..|+. +++.+.+.+.+..+ .+.|+++|....
T Consensus 70 ivvitaG~~~-~~--g~~---R~dll~~N~~----I~~~i~~~i~~~~p-------~~iiivvsNPvD 120 (312)
T TIGR01772 70 VVVIPAGVPR-KP--GMT---RDDLFNVNAG----IVKDLVAAVAESCP-------KAMILVITNPVN 120 (312)
T ss_pred EEEEeCCCCC-CC--Ccc---HHHHHHHhHH----HHHHHHHHHHHhCC-------CeEEEEecCchh
Confidence 9999999642 21 122 3445666665 56666666665543 377888877653
|
Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases. |
| >cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA | Back alignment and domain information |
|---|
Probab=96.81 E-value=0.015 Score=46.76 Aligned_cols=81 Identities=16% Similarity=0.287 Sum_probs=52.9
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCC-eEEEEeCCc-------------------chHHHHHHHHHhcCC--CeeEE
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRK-------------------TVLRSAVAALHSLGI--PAIGL 66 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~-~v~l~~r~~-------------------~~~~~~~~~~~~~~~--~~~~~ 66 (249)
.+++++++|.| .||+|.++++.|+..|. +++++|.+. .+.+.+++.+...+. ++..+
T Consensus 18 ~L~~~~VlivG-~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~~ 96 (228)
T cd00757 18 KLKNARVLVVG-AGGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIEAY 96 (228)
T ss_pred HHhCCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEEEEe
Confidence 46788999998 45999999999999998 688886532 234445555555544 34445
Q ss_pred EccCCCHHHHHHHHHHHHHHhCCccEEEEcCC
Q 025672 67 EGDVRKREDAVRVVESTINHFGKLDILVNAAA 98 (249)
Q Consensus 67 ~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag 98 (249)
..+++ .+++..++ ...|+||.+..
T Consensus 97 ~~~i~-~~~~~~~~-------~~~DvVi~~~d 120 (228)
T cd00757 97 NERLD-AENAEELI-------AGYDLVLDCTD 120 (228)
T ss_pred cceeC-HHHHHHHH-------hCCCEEEEcCC
Confidence 44443 23333333 35788887765
|
Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1). |
| >PRK04148 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.80 E-value=0.0039 Score=45.50 Aligned_cols=56 Identities=16% Similarity=0.212 Sum_probs=44.8
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHH
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKRE 74 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~ 74 (249)
+++.+++.|.+ -|.++|..|.+.|++|+.+|.++...+...+. .+.++..|+.+++
T Consensus 16 ~~~kileIG~G--fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~~~------~~~~v~dDlf~p~ 71 (134)
T PRK04148 16 KNKKIVELGIG--FYFKVAKKLKESGFDVIVIDINEKAVEKAKKL------GLNAFVDDLFNPN 71 (134)
T ss_pred cCCEEEEEEec--CCHHHHHHHHHCCCEEEEEECCHHHHHHHHHh------CCeEEECcCCCCC
Confidence 46789999987 78889999999999999999998865544332 3678888888765
|
|
| >cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins | Back alignment and domain information |
|---|
Probab=96.79 E-value=0.016 Score=42.96 Aligned_cols=31 Identities=35% Similarity=0.593 Sum_probs=27.1
Q ss_pred EEEEecCCCchhHHHHHHHHHcCC-eEEEEeCC
Q 025672 14 VALLTGGGSGIGFEISLQLGKHGA-AIAIMGRR 45 (249)
Q Consensus 14 ~~lItGa~~giG~~~a~~l~~~G~-~v~l~~r~ 45 (249)
+++|.|+ ||+|.++++.|++.|. ++.++|.+
T Consensus 1 ~VliiG~-GglGs~ia~~L~~~Gv~~i~ivD~d 32 (143)
T cd01483 1 RVLLVGL-GGLGSEIALNLARSGVGKITLIDFD 32 (143)
T ss_pred CEEEECC-CHHHHHHHHHHHHCCCCEEEEEcCC
Confidence 3688887 7999999999999998 69998865
|
This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. |
| >PRK06718 precorrin-2 dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.76 E-value=0.0096 Score=46.94 Aligned_cols=38 Identities=24% Similarity=0.281 Sum_probs=34.1
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCc
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK 46 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~ 46 (249)
.++++|.+||.|| |.+|...++.|.+.|++|+++++..
T Consensus 6 l~l~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~ 43 (202)
T PRK06718 6 IDLSNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPEL 43 (202)
T ss_pred EEcCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 3589999999998 7999999999999999999998754
|
|
| >PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.0073 Score=58.38 Aligned_cols=77 Identities=14% Similarity=0.194 Sum_probs=61.1
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcC-Ce-------------EEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHH
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHG-AA-------------IAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDA 76 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G-~~-------------v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~ 76 (249)
+.|.++|.|+ |.||+..++.|++.. +. |++++++.+..+++.+.. .++..+++|++|.+++
T Consensus 568 ~~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~----~~~~~v~lDv~D~e~L 642 (1042)
T PLN02819 568 KSQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGI----ENAEAVQLDVSDSESL 642 (1042)
T ss_pred cCCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhc----CCCceEEeecCCHHHH
Confidence 4678999997 899999999999763 23 888899887777766654 2467889999999888
Q ss_pred HHHHHHHHHHhCCccEEEEcCCC
Q 025672 77 VRVVESTINHFGKLDILVNAAAG 99 (249)
Q Consensus 77 ~~~~~~~~~~~~~id~vi~~ag~ 99 (249)
.++++ .+|+||++...
T Consensus 643 ~~~v~-------~~DaVIsalP~ 658 (1042)
T PLN02819 643 LKYVS-------QVDVVISLLPA 658 (1042)
T ss_pred HHhhc-------CCCEEEECCCc
Confidence 77765 48999998763
|
|
| >cd05290 LDH_3 A subgroup of L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.089 Score=44.30 Aligned_cols=114 Identities=15% Similarity=0.173 Sum_probs=74.1
Q ss_pred EEEecCCCchhHHHHHHHHHcCC--eEEEEeCCcchHHHHHHHHHhcC-----CCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 15 ALLTGGGSGIGFEISLQLGKHGA--AIAIMGRRKTVLRSAVAALHSLG-----IPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 15 ~lItGa~~giG~~~a~~l~~~G~--~v~l~~r~~~~~~~~~~~~~~~~-----~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
+.|.|+ |.||..+|..|+.+|. +++|+|.+++..+....++.+.. ..+.+.. .+. +.+
T Consensus 2 i~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~~---~~y-----------~~~ 66 (307)
T cd05290 2 LVVIGA-GHVGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRA---GDY-----------DDC 66 (307)
T ss_pred EEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEEE---CCH-----------HHh
Confidence 578898 8999999999999886 69999999888777777775431 1233332 221 223
Q ss_pred CCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccc
Q 025672 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL 158 (249)
Q Consensus 88 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~ 158 (249)
..-|+||..||... ++ ..+.+ -.+.++.|. .+++.+.+.+.+..+ .+.++.+|...
T Consensus 67 ~~aDivvitaG~~~-kp--g~tr~-R~dll~~N~----~I~~~i~~~i~~~~p-------~~i~ivvsNPv 122 (307)
T cd05290 67 ADADIIVITAGPSI-DP--GNTDD-RLDLAQTNA----KIIREIMGNITKVTK-------EAVIILITNPL 122 (307)
T ss_pred CCCCEEEECCCCCC-CC--CCCch-HHHHHHHHH----HHHHHHHHHHHHhCC-------CeEEEEecCcH
Confidence 46799999999642 22 12210 234455554 467777777776654 36677777654
|
L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=96.74 E-value=0.018 Score=47.94 Aligned_cols=74 Identities=15% Similarity=0.206 Sum_probs=53.2
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCC-CHHHHHHHHHHHHHHhCC
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVR-KREDAVRVVESTINHFGK 89 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~-~~~~~~~~~~~~~~~~~~ 89 (249)
.|+++-|+|+.| +|.--.+.-...|++|+.+++...+-++..+.+ |+...+ |.+ |++-++++...
T Consensus 181 pG~~vgI~GlGG-LGh~aVq~AKAMG~rV~vis~~~~kkeea~~~L---GAd~fv---~~~~d~d~~~~~~~~------- 246 (360)
T KOG0023|consen 181 PGKWVGIVGLGG-LGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSL---GADVFV---DSTEDPDIMKAIMKT------- 246 (360)
T ss_pred CCcEEEEecCcc-cchHHHHHHHHhCcEEEEEeCCchhHHHHHHhc---CcceeE---EecCCHHHHHHHHHh-------
Confidence 699999999987 998777666678999999999886667666665 433333 667 66666666653
Q ss_pred ccEEEEcCC
Q 025672 90 LDILVNAAA 98 (249)
Q Consensus 90 id~vi~~ag 98 (249)
.|.+++++-
T Consensus 247 ~dg~~~~v~ 255 (360)
T KOG0023|consen 247 TDGGIDTVS 255 (360)
T ss_pred hcCcceeee
Confidence 455555443
|
|
| >PTZ00082 L-lactate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.71 E-value=0.14 Score=43.35 Aligned_cols=124 Identities=15% Similarity=0.164 Sum_probs=72.4
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhc----CCCeeEEEccCCCHHHHHHHHHHH
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSL----GIPAIGLEGDVRKREDAVRVVEST 83 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~----~~~~~~~~~Dl~~~~~~~~~~~~~ 83 (249)
+++.+.+.|+|+ |.+|..++..++..|. +|+++|.+++..+....++... +....+.. .+|.+
T Consensus 3 ~~~~~KI~IIGa-G~vG~~ia~~la~~gl~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~I~~--~~d~~--------- 70 (321)
T PTZ00082 3 MIKRRKISLIGS-GNIGGVMAYLIVLKNLGDVVLFDIVKNIPQGKALDISHSNVIAGSNSKVIG--TNNYE--------- 70 (321)
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCCchhhHHHHHHHhhhhccCCCeEEEE--CCCHH---------
Confidence 345578999994 7899999999999995 8999999988653222222111 11122211 12221
Q ss_pred HHHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccc
Q 025672 84 INHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL 158 (249)
Q Consensus 84 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~ 158 (249)
.+..-|+||.++|........+.+.+. .+.+..|+ .+.+.+.+.+.+..+ .+.++++|...
T Consensus 71 --~l~~aDiVI~tag~~~~~~~~~~~~~r-~~~l~~n~----~i~~~i~~~i~~~~p-------~a~~iv~sNP~ 131 (321)
T PTZ00082 71 --DIAGSDVVIVTAGLTKRPGKSDKEWNR-DDLLPLNA----KIMDEVAEGIKKYCP-------NAFVIVITNPL 131 (321)
T ss_pred --HhCCCCEEEECCCCCCCCCCCcCCCCH-HHHHHHHH----HHHHHHHHHHHHHCC-------CeEEEEecCcH
Confidence 124579999999875422212222222 34455553 456667777766543 35677776544
|
|
| >TIGR02355 moeB molybdopterin synthase sulfurylase MoeB | Back alignment and domain information |
|---|
Probab=96.68 E-value=0.022 Score=46.15 Aligned_cols=38 Identities=26% Similarity=0.434 Sum_probs=32.0
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCC-eEEEEeCCcc
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKT 47 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~-~v~l~~r~~~ 47 (249)
.+++++|+|.|+. |+|..+++.|++.|. +++++|.+.-
T Consensus 21 ~L~~~~VlvvG~G-glGs~va~~La~~Gvg~i~lvD~D~v 59 (240)
T TIGR02355 21 ALKASRVLIVGLG-GLGCAASQYLAAAGVGNLTLLDFDTV 59 (240)
T ss_pred HHhCCcEEEECcC-HHHHHHHHHHHHcCCCEEEEEeCCcc
Confidence 4678899999865 999999999999998 6889887543
|
This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899). |
| >PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=96.67 E-value=0.016 Score=43.93 Aligned_cols=85 Identities=13% Similarity=0.076 Sum_probs=58.9
Q ss_pred cEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHH-------hcCCCeeEEEccCCCHHHHHHHHHH--H
Q 025672 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALH-------SLGIPAIGLEGDVRKREDAVRVVES--T 83 (249)
Q Consensus 13 k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~-------~~~~~~~~~~~Dl~~~~~~~~~~~~--~ 83 (249)
+++-+.|- |-+|..++++|+++|++|.+.+|+.++.+++.++-. +.-....++-.-+.+.+.+++++.. +
T Consensus 2 ~~Ig~IGl-G~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~g~~~~~s~~e~~~~~dvvi~~v~~~~~v~~v~~~~~i 80 (163)
T PF03446_consen 2 MKIGFIGL-GNMGSAMARNLAKAGYEVTVYDRSPEKAEALAEAGAEVADSPAEAAEQADVVILCVPDDDAVEAVLFGENI 80 (163)
T ss_dssp BEEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHHTTEEEESSHHHHHHHBSEEEE-SSSHHHHHHHHHCTTH
T ss_pred CEEEEEch-HHHHHHHHHHHHhcCCeEEeeccchhhhhhhHHhhhhhhhhhhhHhhcccceEeecccchhhhhhhhhhHH
Confidence 45677776 799999999999999999999999888777664310 0001235666678999999999887 6
Q ss_pred HHHhCCccEEEEcCC
Q 025672 84 INHFGKLDILVNAAA 98 (249)
Q Consensus 84 ~~~~~~id~vi~~ag 98 (249)
.....+=.++|.+..
T Consensus 81 ~~~l~~g~iiid~sT 95 (163)
T PF03446_consen 81 LAGLRPGKIIIDMST 95 (163)
T ss_dssp GGGS-TTEEEEE-SS
T ss_pred hhccccceEEEecCC
Confidence 665555566666555
|
1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A .... |
| >PLN00112 malate dehydrogenase (NADP); Provisional | Back alignment and domain information |
|---|
Probab=96.66 E-value=0.05 Score=47.95 Aligned_cols=116 Identities=14% Similarity=0.070 Sum_probs=76.3
Q ss_pred CcEEEEecCCCchhHHHHHHHHHc-------CC--eEEEEeCCcchHHHHHHHHHhcC----CCeeEEEccCCCHHHHHH
Q 025672 12 GKVALLTGGGSGIGFEISLQLGKH-------GA--AIAIMGRRKTVLRSAVAALHSLG----IPAIGLEGDVRKREDAVR 78 (249)
Q Consensus 12 ~k~~lItGa~~giG~~~a~~l~~~-------G~--~v~l~~r~~~~~~~~~~~~~~~~----~~~~~~~~Dl~~~~~~~~ 78 (249)
--.+.|+|++|.+|.+++-.|+.. |. ++++++++++.++...-++.+.- ..+.+ .. .+
T Consensus 100 ~~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v~i-~~--~~------ 170 (444)
T PLN00112 100 LINVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREVSI-GI--DP------ 170 (444)
T ss_pred CeEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCceEE-ec--CC------
Confidence 357899999999999999999988 65 79999999999888877776432 11111 11 12
Q ss_pred HHHHHHHHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHh-cCCCCCCCCCCceEEEeccc
Q 025672 79 VVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKK-GGRGQASSSSGGIIINISAT 157 (249)
Q Consensus 79 ~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~~~~~~~~~g~iv~iss~ 157 (249)
.+.+..-|++|..+|... ++ ..+ -.+.++.|+. +++.+.+.+.+ ..+ .+.||.+|..
T Consensus 171 -----ye~~kdaDiVVitAG~pr-kp--G~t---R~dLl~~N~~----I~k~i~~~I~~~a~p-------~~ivIVVsNP 228 (444)
T PLN00112 171 -----YEVFQDAEWALLIGAKPR-GP--GME---RADLLDINGQ----IFAEQGKALNEVASR-------NVKVIVVGNP 228 (444)
T ss_pred -----HHHhCcCCEEEECCCCCC-CC--CCC---HHHHHHHHHH----HHHHHHHHHHHhcCC-------CeEEEEcCCc
Confidence 123356899999999632 22 223 3445666654 55555666655 232 3777777754
Q ss_pred c
Q 025672 158 L 158 (249)
Q Consensus 158 ~ 158 (249)
.
T Consensus 229 v 229 (444)
T PLN00112 229 C 229 (444)
T ss_pred H
Confidence 3
|
|
| >PRK09880 L-idonate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.66 E-value=0.013 Score=50.06 Aligned_cols=76 Identities=21% Similarity=0.222 Sum_probs=51.6
Q ss_pred CCCcEEEEecCCCchhHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhC
Q 025672 10 LKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (249)
Q Consensus 10 l~~k~~lItGa~~giG~~~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 88 (249)
..+++++|+|+ |++|...+..+...|+ +|+++++++++++.+. ++ |... + .|..+. ++.++. +..+
T Consensus 168 ~~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~-~l---Ga~~-v--i~~~~~-~~~~~~----~~~g 234 (343)
T PRK09880 168 LQGKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAR-EM---GADK-L--VNPQND-DLDHYK----AEKG 234 (343)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHH-Hc---CCcE-E--ecCCcc-cHHHHh----ccCC
Confidence 35899999986 8999999988888998 5888998887765433 33 4332 2 243332 233222 2235
Q ss_pred CccEEEEcCC
Q 025672 89 KLDILVNAAA 98 (249)
Q Consensus 89 ~id~vi~~ag 98 (249)
.+|++|.+.|
T Consensus 235 ~~D~vid~~G 244 (343)
T PRK09880 235 YFDVSFEVSG 244 (343)
T ss_pred CCCEEEECCC
Confidence 6999999988
|
|
| >PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A | Back alignment and domain information |
|---|
Probab=96.64 E-value=0.0027 Score=41.03 Aligned_cols=35 Identities=29% Similarity=0.446 Sum_probs=23.2
Q ss_pred CC-cEEEEecCCCchhHH--HHHHHHHcCCeEEEEeCCc
Q 025672 11 KG-KVALLTGGGSGIGFE--ISLQLGKHGAAIAIMGRRK 46 (249)
Q Consensus 11 ~~-k~~lItGa~~giG~~--~a~~l~~~G~~v~l~~r~~ 46 (249)
+| |++||+|+|+|.|.+ ++..| ..|++.+.+....
T Consensus 37 ~GpK~VLViGaStGyGLAsRIa~aF-g~gA~TiGV~fEk 74 (78)
T PF12242_consen 37 NGPKKVLVIGASTGYGLASRIAAAF-GAGADTIGVSFEK 74 (78)
T ss_dssp TS-SEEEEES-SSHHHHHHHHHHHH-CC--EEEEEE---
T ss_pred CCCceEEEEecCCcccHHHHHHHHh-cCCCCEEEEeecc
Confidence 44 999999999999998 55555 6678888777644
|
|
| >cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity | Back alignment and domain information |
|---|
Probab=96.64 E-value=0.0073 Score=50.89 Aligned_cols=116 Identities=17% Similarity=0.182 Sum_probs=67.5
Q ss_pred cEEEEecCCCchhHHHHHHHHHcCC--eEEEEeCCc--chHHHHHHHHHhc----CCCeeEEEccCCCHHHHHHHHHHHH
Q 025672 13 KVALLTGGGSGIGFEISLQLGKHGA--AIAIMGRRK--TVLRSAVAALHSL----GIPAIGLEGDVRKREDAVRVVESTI 84 (249)
Q Consensus 13 k~~lItGa~~giG~~~a~~l~~~G~--~v~l~~r~~--~~~~~~~~~~~~~----~~~~~~~~~Dl~~~~~~~~~~~~~~ 84 (249)
+++.|+|++|.+|..++..|+..|. .|+++++++ +.++....++.+. +... .+..+. +.+.
T Consensus 1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~~---~i~~~~--d~~~------ 69 (309)
T cd05294 1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGIDA---EIKISS--DLSD------ 69 (309)
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchhhhchhccCCCc---EEEECC--CHHH------
Confidence 3689999999999999999999987 499999965 4444433333221 1111 111111 1111
Q ss_pred HHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccc
Q 025672 85 NHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL 158 (249)
Q Consensus 85 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~ 158 (249)
+..-|++|.++|.... + +.+. .+.++.|+.-. +.+.+.+.+..+ .+.||++++..
T Consensus 70 --l~~aDiViitag~p~~-~--~~~r---~dl~~~n~~i~----~~~~~~i~~~~~-------~~~viv~~npv 124 (309)
T cd05294 70 --VAGSDIVIITAGVPRK-E--GMSR---LDLAKKNAKIV----KKYAKQIAEFAP-------DTKILVVTNPV 124 (309)
T ss_pred --hCCCCEEEEecCCCCC-C--CCCH---HHHHHHHHHHH----HHHHHHHHHHCC-------CeEEEEeCCch
Confidence 2468999999986421 1 1222 34455565444 444444444322 37788888754
|
The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox |
| >TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2 | Back alignment and domain information |
|---|
Probab=96.63 E-value=0.02 Score=45.11 Aligned_cols=36 Identities=17% Similarity=0.391 Sum_probs=32.5
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCC-eEEEEeCC
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRR 45 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~-~v~l~~r~ 45 (249)
.|+.++++|.|+ ||+|..++..|++.|. +++++|++
T Consensus 18 ~L~~~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D 54 (200)
T TIGR02354 18 KLEQATVAICGL-GGLGSNVAINLARAGIGKLILVDFD 54 (200)
T ss_pred HHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence 367889999998 6899999999999999 69999987
|
Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter. |
| >PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=96.63 E-value=0.01 Score=53.14 Aligned_cols=80 Identities=19% Similarity=0.157 Sum_probs=54.6
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcc-hHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHH
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT-VLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~-~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 86 (249)
..+++|+++|.|+ |++|.++|+.|.++|++|++++++.. ......+.+...|. .++..+-.. .
T Consensus 12 ~~~~~~~v~viG~-G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~~gv--~~~~~~~~~------~------- 75 (480)
T PRK01438 12 SDWQGLRVVVAGL-GVSGFAAADALLELGARVTVVDDGDDERHRALAAILEALGA--TVRLGPGPT------L------- 75 (480)
T ss_pred cCcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHHcCC--EEEECCCcc------c-------
Confidence 3467899999997 67999999999999999999986643 33344555655543 332222111 0
Q ss_pred hCCccEEEEcCCCCCCC
Q 025672 87 FGKLDILVNAAAGNFLV 103 (249)
Q Consensus 87 ~~~id~vi~~ag~~~~~ 103 (249)
....|.||..+|+.+..
T Consensus 76 ~~~~D~Vv~s~Gi~~~~ 92 (480)
T PRK01438 76 PEDTDLVVTSPGWRPDA 92 (480)
T ss_pred cCCCCEEEECCCcCCCC
Confidence 13579999999976543
|
|
| >PRK08306 dipicolinate synthase subunit A; Reviewed | Back alignment and domain information |
|---|
Probab=96.63 E-value=0.02 Score=47.97 Aligned_cols=41 Identities=22% Similarity=0.337 Sum_probs=36.1
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchH
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVL 49 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~ 49 (249)
..+.+++++|.|. |++|+.++..|...|++|++++|+.+..
T Consensus 148 ~~l~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~~ 188 (296)
T PRK08306 148 ITIHGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAHL 188 (296)
T ss_pred CCCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHH
Confidence 4567999999997 6799999999999999999999986643
|
|
| >TIGR01759 MalateDH-SF1 malate dehydrogenase | Back alignment and domain information |
|---|
Probab=96.59 E-value=0.024 Score=48.06 Aligned_cols=119 Identities=15% Similarity=0.203 Sum_probs=70.8
Q ss_pred cEEEEecCCCchhHHHHHHHHHcCC-------eEEEEeCCc--chHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHH
Q 025672 13 KVALLTGGGSGIGFEISLQLGKHGA-------AIAIMGRRK--TVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVEST 83 (249)
Q Consensus 13 k~~lItGa~~giG~~~a~~l~~~G~-------~v~l~~r~~--~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 83 (249)
-.+.|+|++|.+|..++..|+.+|. +++|+|.++ +.++....++.+.... +.. +.. +. ...
T Consensus 4 ~KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~--~~~-~~~----i~---~~~ 73 (323)
T TIGR01759 4 VRVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFP--LLA-GVV----AT---TDP 73 (323)
T ss_pred eEEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhcccc--ccC-CcE----Ee---cCh
Confidence 4689999999999999999998884 699999965 3356555555432200 000 110 00 111
Q ss_pred HHHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccc
Q 025672 84 INHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISAT 157 (249)
Q Consensus 84 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~ 157 (249)
.+.+..-|+||..||... ++ ..+ -.+.++.|+. +++.+.+.+.+..++ .+.++++|..
T Consensus 74 ~~~~~daDvVVitAG~~~-k~--g~t---R~dll~~Na~----i~~~i~~~i~~~~~~------~~iiivvsNP 131 (323)
T TIGR01759 74 EEAFKDVDAALLVGAFPR-KP--GME---RADLLSKNGK----IFKEQGKALNKVAKK------DVKVLVVGNP 131 (323)
T ss_pred HHHhCCCCEEEEeCCCCC-CC--CCc---HHHHHHHHHH----HHHHHHHHHHhhCCC------CeEEEEeCCc
Confidence 233356799999999642 22 223 3445666654 455555555554321 2667777753
|
This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms. |
| >cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity | Back alignment and domain information |
|---|
Probab=96.58 E-value=0.014 Score=49.12 Aligned_cols=78 Identities=9% Similarity=0.153 Sum_probs=52.4
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCc
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 90 (249)
.|.++||+|+++++|..++......|++|+.+.++.++.+.+.+ + |.. .++ |-.+++ +...+.+.. . +.+
T Consensus 143 ~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~~-~---Ga~-~vi--~~~~~~-~~~~v~~~~-~-~gv 212 (329)
T cd08294 143 AGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWLKE-L---GFD-AVF--NYKTVS-LEEALKEAA-P-DGI 212 (329)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-c---CCC-EEE--eCCCcc-HHHHHHHHC-C-CCc
Confidence 57899999999999999988888899999999888776555433 3 332 222 333322 222222221 1 469
Q ss_pred cEEEEcCC
Q 025672 91 DILVNAAA 98 (249)
Q Consensus 91 d~vi~~ag 98 (249)
|+++.+.|
T Consensus 213 d~vld~~g 220 (329)
T cd08294 213 DCYFDNVG 220 (329)
T ss_pred EEEEECCC
Confidence 99998877
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac |
| >cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1 | Back alignment and domain information |
|---|
Probab=96.58 E-value=0.017 Score=45.33 Aligned_cols=35 Identities=34% Similarity=0.521 Sum_probs=30.0
Q ss_pred CCCcEEEEecCCCchhHHHHHHHHHcCC-eEEEEeCC
Q 025672 10 LKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRR 45 (249)
Q Consensus 10 l~~k~~lItGa~~giG~~~a~~l~~~G~-~v~l~~r~ 45 (249)
+++++++|.|+ +|+|.++++.|+..|. ++.++|.+
T Consensus 19 L~~s~VlIiG~-gglG~evak~La~~GVg~i~lvD~d 54 (197)
T cd01492 19 LRSARILLIGL-KGLGAEIAKNLVLSGIGSLTILDDR 54 (197)
T ss_pred HHhCcEEEEcC-CHHHHHHHHHHHHcCCCEEEEEECC
Confidence 56788999975 5699999999999998 58898864
|
Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain. |
| >COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.52 E-value=0.017 Score=48.94 Aligned_cols=73 Identities=22% Similarity=0.304 Sum_probs=53.0
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCc
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 90 (249)
.|++++|+|.. |+|...++.....|++|+.++|++++++... ++ |....+ |-+|.+..+.+-+ ..
T Consensus 166 pG~~V~I~G~G-GlGh~avQ~Aka~ga~Via~~~~~~K~e~a~-~l---GAd~~i---~~~~~~~~~~~~~-------~~ 230 (339)
T COG1064 166 PGKWVAVVGAG-GLGHMAVQYAKAMGAEVIAITRSEEKLELAK-KL---GADHVI---NSSDSDALEAVKE-------IA 230 (339)
T ss_pred CCCEEEEECCc-HHHHHHHHHHHHcCCeEEEEeCChHHHHHHH-Hh---CCcEEE---EcCCchhhHHhHh-------hC
Confidence 48999999999 9999888877779999999999988765443 33 332222 4445555555443 28
Q ss_pred cEEEEcCC
Q 025672 91 DILVNAAA 98 (249)
Q Consensus 91 d~vi~~ag 98 (249)
|++|.+++
T Consensus 231 d~ii~tv~ 238 (339)
T COG1064 231 DAIIDTVG 238 (339)
T ss_pred cEEEECCC
Confidence 99999887
|
|
| >PF12076 Wax2_C: WAX2 C-terminal domain; InterPro: IPR021940 This presumed domain is functionally uncharacterised | Back alignment and domain information |
|---|
Probab=96.51 E-value=0.0053 Score=45.56 Aligned_cols=41 Identities=24% Similarity=0.364 Sum_probs=36.1
Q ss_pred EEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHH
Q 025672 15 ALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALH 57 (249)
Q Consensus 15 ~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~ 57 (249)
|+++|+++-+|+++|..|+++|.+|+++ ++++.+.+..++.
T Consensus 1 V~L~G~~sKvaraiA~~LC~rgv~V~m~--~~~~y~~lk~~~~ 41 (164)
T PF12076_consen 1 VFLTGNTSKVARAIALALCRRGVQVVML--SKERYESLKSEAP 41 (164)
T ss_pred CeecccccHHHHHHHHHHHhcCCEEEEe--cHHHHHHHHHHcC
Confidence 5889999999999999999999999998 6677788877774
|
This domain is found in eukaryotes. This domain is about 170 amino acids in length. This domain is found associated with PF04116 from PFAM. This domain has a conserved LEGW sequence motif. This region has similarity to short chain dehydrogenases []. |
| >cd05288 PGDH Prostaglandin dehydrogenases | Back alignment and domain information |
|---|
Probab=96.50 E-value=0.022 Score=48.04 Aligned_cols=79 Identities=13% Similarity=0.210 Sum_probs=53.5
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCc
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 90 (249)
++.+++|.|+++++|..++..+...|++|+.+.++.++.+.+.+.+ +.. .++ |..+.+..+.+. +.. . +.+
T Consensus 145 ~~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~~---g~~-~~~--~~~~~~~~~~v~-~~~-~-~~~ 215 (329)
T cd05288 145 PGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWLVEEL---GFD-AAI--NYKTPDLAEALK-EAA-P-DGI 215 (329)
T ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhhc---CCc-eEE--ecCChhHHHHHH-Hhc-c-CCc
Confidence 5789999999999999999999999999999988877655544323 221 222 333333222222 222 1 469
Q ss_pred cEEEEcCC
Q 025672 91 DILVNAAA 98 (249)
Q Consensus 91 d~vi~~ag 98 (249)
|+++.+.|
T Consensus 216 d~vi~~~g 223 (329)
T cd05288 216 DVYFDNVG 223 (329)
T ss_pred eEEEEcch
Confidence 99999887
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino |
| >TIGR01724 hmd_rel H2-forming N(5),N(10)-methenyltetrahydromethanopterin dehydrogenase-related protein | Back alignment and domain information |
|---|
Probab=96.47 E-value=0.086 Score=44.22 Aligned_cols=121 Identities=11% Similarity=0.152 Sum_probs=70.2
Q ss_pred hhHHHHHHHHHcCCeEEEEeCCcchHH-HHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCccEEEEcCCCCCC
Q 025672 24 IGFEISLQLGKHGAAIAIMGRRKTVLR-SAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL 102 (249)
Q Consensus 24 iG~~~a~~l~~~G~~v~l~~r~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~ 102 (249)
=|..+|++|++.|+.|++.+|+.+..+ ...+.+.+.|... . ++..++++ .-|+||.+-.
T Consensus 31 gGspMArnLlkAGheV~V~Drnrsa~e~e~~e~LaeaGA~~-------A--aS~aEAAa-------~ADVVIL~LP---- 90 (341)
T TIGR01724 31 GGSRMAIEFAMAGHDVVLAEPNREFMSDDLWKKVEDAGVKV-------V--SDDKEAAK-------HGEIHVLFTP---- 90 (341)
T ss_pred CHHHHHHHHHHCCCEEEEEeCChhhhhhhhhHHHHHCCCee-------c--CCHHHHHh-------CCCEEEEecC----
Confidence 478999999999999999999877653 3344454444321 1 13334433 4689988775
Q ss_pred CCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEE-EeccccccccCccchhhHHHHHHHHHHHH
Q 025672 103 VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIII-NISATLHYTATWYQIHVSAAKAAVDSITR 181 (249)
Q Consensus 103 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv-~iss~~~~~~~~~~~~y~~sK~a~~~l~~ 181 (249)
+.+..+..+ .-+++.+.. |++| .+|+.. . ..+.+
T Consensus 91 ------d~aaV~eVl-----------~GLaa~L~~-----------GaIVID~STIs-P----------------~t~~~ 125 (341)
T TIGR01724 91 ------FGKGTFSIA-----------RTIIEHVPE-----------NAVICNTCTVS-P----------------VVLYY 125 (341)
T ss_pred ------CHHHHHHHH-----------HHHHhcCCC-----------CCEEEECCCCC-H----------------HHHHH
Confidence 222222221 123333222 4444 455442 1 23444
Q ss_pred HHHHHhc-CCCCeEEEEEecCcccccccc
Q 025672 182 SLALEWG-TDYAIRVNGIAPGPIKDTAGV 209 (249)
Q Consensus 182 ~la~e~~-~~~gi~v~~v~pG~v~t~~~~ 209 (249)
.|-.+++ .+..+-|.+.||+.|......
T Consensus 126 ~~e~~l~~~r~d~~v~s~HP~~vP~~~~~ 154 (341)
T TIGR01724 126 SLEKILRLKRTDVGISSMHPAAVPGTPQH 154 (341)
T ss_pred HHHHHhhcCccccCeeccCCCCCCCCCCC
Confidence 4545443 367899999999999754443
|
This model represents a sister clade to the authenticated coenzyme F420-dependent N(5),N(10)-methenyltetrahydromethanopterin reductase (HMD) of TIGR01723. Two members, designated HmdII and HmdIII, are found. Members are restricted to methanogens, but the function is unknown. |
| >PRK08223 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=96.47 E-value=0.022 Score=47.19 Aligned_cols=38 Identities=24% Similarity=0.267 Sum_probs=32.4
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCC-eEEEEeCCcc
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKT 47 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~-~v~l~~r~~~ 47 (249)
.|++.+|+|.|+. |+|..++..|+..|. ++.++|.+.-
T Consensus 24 kL~~s~VlIvG~G-GLGs~va~~LA~aGVG~i~lvD~D~V 62 (287)
T PRK08223 24 RLRNSRVAIAGLG-GVGGIHLLTLARLGIGKFTIADFDVF 62 (287)
T ss_pred HHhcCCEEEECCC-HHHHHHHHHHHHhCCCeEEEEeCCCc
Confidence 3678899999875 999999999999998 6999987644
|
|
| >cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases | Back alignment and domain information |
|---|
Probab=96.44 E-value=0.052 Score=45.69 Aligned_cols=117 Identities=19% Similarity=0.171 Sum_probs=69.5
Q ss_pred EEEEecCCCchhHHHHHHHHHcCC--eEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCcc
Q 025672 14 VALLTGGGSGIGFEISLQLGKHGA--AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD 91 (249)
Q Consensus 14 ~~lItGa~~giG~~~a~~l~~~G~--~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 91 (249)
.+.|+|++|.+|.++|..|+.+|. +++|+|.+ .++...-++.+......+..+. ..++ ..+.+..-|
T Consensus 2 KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~--~a~g~alDL~~~~~~~~i~~~~--~~~~-------~y~~~~daD 70 (310)
T cd01337 2 KVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIV--NTPGVAADLSHINTPAKVTGYL--GPEE-------LKKALKGAD 70 (310)
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecC--ccceeehHhHhCCCcceEEEec--CCCc-------hHHhcCCCC
Confidence 578999999999999999999885 79999988 4443334443321111111110 1111 122335689
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccc
Q 025672 92 ILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL 158 (249)
Q Consensus 92 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~ 158 (249)
++|.+||... ++ ..+ -.+.++.|..- ++.+.+.+.+..+ .+.|+++|...
T Consensus 71 ivvitaG~~~-k~--g~t---R~dll~~N~~i----~~~i~~~i~~~~p-------~a~vivvtNPv 120 (310)
T cd01337 71 VVVIPAGVPR-KP--GMT---RDDLFNINAGI----VRDLATAVAKACP-------KALILIISNPV 120 (310)
T ss_pred EEEEeCCCCC-CC--CCC---HHHHHHHHHHH----HHHHHHHHHHhCC-------CeEEEEccCch
Confidence 9999999642 21 122 34556677654 4444444444432 37788887765
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >cd01487 E1_ThiF_like E1_ThiF_like | Back alignment and domain information |
|---|
Probab=96.44 E-value=0.029 Score=43.09 Aligned_cols=32 Identities=19% Similarity=0.412 Sum_probs=28.0
Q ss_pred EEEEecCCCchhHHHHHHHHHcCC-eEEEEeCCc
Q 025672 14 VALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRK 46 (249)
Q Consensus 14 ~~lItGa~~giG~~~a~~l~~~G~-~v~l~~r~~ 46 (249)
+++|.|+ ||+|..+++.|++.|. +++++|.+.
T Consensus 1 ~VlViG~-GglGs~ia~~La~~Gvg~i~lvD~D~ 33 (174)
T cd01487 1 KVGIAGA-GGLGSNIAVLLARSGVGNLKLVDFDV 33 (174)
T ss_pred CEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence 3678885 7999999999999999 599999876
|
Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown. |
| >PRK12480 D-lactate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.44 E-value=0.051 Score=46.27 Aligned_cols=88 Identities=16% Similarity=0.175 Sum_probs=54.8
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHH---HHHh--cCCCeeEEEccCCCHHHHHHHH-H
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVA---ALHS--LGIPAIGLEGDVRKREDAVRVV-E 81 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~---~~~~--~~~~~~~~~~Dl~~~~~~~~~~-~ 81 (249)
..++|+++.|.|. |.||+++|+.|...|++|+..+|+......... .+.. ....+.++.+-.+. +...++ +
T Consensus 142 ~~l~g~~VgIIG~-G~IG~~vA~~L~~~G~~V~~~d~~~~~~~~~~~~~~~l~ell~~aDiVil~lP~t~--~t~~li~~ 218 (330)
T PRK12480 142 KPVKNMTVAIIGT-GRIGAATAKIYAGFGATITAYDAYPNKDLDFLTYKDSVKEAIKDADIISLHVPANK--ESYHLFDK 218 (330)
T ss_pred cccCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCChhHhhhhhhccCCHHHHHhcCCEEEEeCCCcH--HHHHHHhH
Confidence 4689999999986 679999999999999999999988654322111 1111 13455566555554 333333 3
Q ss_pred HHHHHhCCccEEEEcCCC
Q 025672 82 STINHFGKLDILVNAAAG 99 (249)
Q Consensus 82 ~~~~~~~~id~vi~~ag~ 99 (249)
+..+.+ +.+.++-|.+.
T Consensus 219 ~~l~~m-k~gavlIN~aR 235 (330)
T PRK12480 219 AMFDHV-KKGAILVNAAR 235 (330)
T ss_pred HHHhcC-CCCcEEEEcCC
Confidence 333333 34556555653
|
|
| >cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase | Back alignment and domain information |
|---|
Probab=96.42 E-value=0.012 Score=43.54 Aligned_cols=41 Identities=24% Similarity=0.352 Sum_probs=36.9
Q ss_pred CCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcc
Q 025672 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT 47 (249)
Q Consensus 7 ~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~ 47 (249)
..+++||.++|.|.+.-+|+.++..|.++|++|.+++++..
T Consensus 23 ~~~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~ 63 (140)
T cd05212 23 GVRLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTI 63 (140)
T ss_pred CCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCc
Confidence 34789999999999999999999999999999999987653
|
NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional |
| >PLN03139 formate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.42 E-value=0.041 Score=47.73 Aligned_cols=39 Identities=23% Similarity=0.200 Sum_probs=34.7
Q ss_pred CCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCc
Q 025672 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK 46 (249)
Q Consensus 7 ~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~ 46 (249)
...++||++.|.| .|.||+.+++.|...|++|+..+|+.
T Consensus 194 ~~~L~gktVGIVG-~G~IG~~vA~~L~afG~~V~~~d~~~ 232 (386)
T PLN03139 194 AYDLEGKTVGTVG-AGRIGRLLLQRLKPFNCNLLYHDRLK 232 (386)
T ss_pred CcCCCCCEEEEEe-ecHHHHHHHHHHHHCCCEEEEECCCC
Confidence 3568999999999 57899999999999999999988764
|
|
| >cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like | Back alignment and domain information |
|---|
Probab=96.42 E-value=0.036 Score=43.56 Aligned_cols=37 Identities=32% Similarity=0.505 Sum_probs=31.1
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCC-eEEEEeCCc
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRK 46 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~-~v~l~~r~~ 46 (249)
.+++.+++|.|++ |+|.++++.|+..|. +++++|.+.
T Consensus 16 ~L~~s~VlviG~g-glGsevak~L~~~GVg~i~lvD~d~ 53 (198)
T cd01485 16 KLRSAKVLIIGAG-ALGAEIAKNLVLAGIDSITIVDHRL 53 (198)
T ss_pred HHhhCcEEEECCC-HHHHHHHHHHHHcCCCEEEEEECCc
Confidence 3567889999876 599999999999998 588998753
|
E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol |
| >PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B | Back alignment and domain information |
|---|
Probab=96.39 E-value=0.0032 Score=43.93 Aligned_cols=37 Identities=27% Similarity=0.377 Sum_probs=32.1
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCc
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK 46 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~ 46 (249)
++++|.+||+|+ |.+|..-++.|++.|++|++++...
T Consensus 4 ~l~~~~vlVvGg-G~va~~k~~~Ll~~gA~v~vis~~~ 40 (103)
T PF13241_consen 4 DLKGKRVLVVGG-GPVAARKARLLLEAGAKVTVISPEI 40 (103)
T ss_dssp --TT-EEEEEEE-SHHHHHHHHHHCCCTBEEEEEESSE
T ss_pred EcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCch
Confidence 588999999998 7999999999999999999999875
|
|
| >PRK09496 trkA potassium transporter peripheral membrane component; Reviewed | Back alignment and domain information |
|---|
Probab=96.38 E-value=0.016 Score=51.50 Aligned_cols=78 Identities=19% Similarity=0.271 Sum_probs=59.7
Q ss_pred CCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCC
Q 025672 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK 89 (249)
Q Consensus 10 l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 89 (249)
...+.++|.|+ |.+|+.+++.|.++|.+|++++++++..+.+.++. ..+.++..|.++++.++++- ...
T Consensus 229 ~~~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~~~~~~~~~----~~~~~i~gd~~~~~~L~~~~------~~~ 297 (453)
T PRK09496 229 KPVKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPERAEELAEEL----PNTLVLHGDGTDQELLEEEG------IDE 297 (453)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHC----CCCeEEECCCCCHHHHHhcC------Ccc
Confidence 45788999998 89999999999999999999999987766655432 34667888999887765542 135
Q ss_pred ccEEEEcCC
Q 025672 90 LDILVNAAA 98 (249)
Q Consensus 90 id~vi~~ag 98 (249)
.|.+|....
T Consensus 298 a~~vi~~~~ 306 (453)
T PRK09496 298 ADAFIALTN 306 (453)
T ss_pred CCEEEECCC
Confidence 677776544
|
|
| >PRK06719 precorrin-2 dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.37 E-value=0.019 Score=43.32 Aligned_cols=83 Identities=20% Similarity=0.284 Sum_probs=52.1
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHH----------hcCCCeeEEEccCCCHHHHH
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALH----------SLGIPAIGLEGDVRKREDAV 77 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~----------~~~~~~~~~~~Dl~~~~~~~ 77 (249)
.+++||.++|.||+ .+|...++.|++.|++|++++.. ..+++.+ +. ..+-.-..+-+-.++.+++.
T Consensus 9 l~l~~~~vlVvGGG-~va~rka~~Ll~~ga~V~VIsp~--~~~~l~~-l~~i~~~~~~~~~~dl~~a~lViaaT~d~e~N 84 (157)
T PRK06719 9 FNLHNKVVVIIGGG-KIAYRKASGLKDTGAFVTVVSPE--ICKEMKE-LPYITWKQKTFSNDDIKDAHLIYAATNQHAVN 84 (157)
T ss_pred EEcCCCEEEEECCC-HHHHHHHHHHHhCCCEEEEEcCc--cCHHHHh-ccCcEEEecccChhcCCCceEEEECCCCHHHH
Confidence 45899999999976 89999999999999999988643 2233322 11 00111112223356777777
Q ss_pred HHHHHHHHHhCCccEEEEcCC
Q 025672 78 RVVESTINHFGKLDILVNAAA 98 (249)
Q Consensus 78 ~~~~~~~~~~~~id~vi~~ag 98 (249)
..+.+..+.. .++|++.
T Consensus 85 ~~i~~~a~~~----~~vn~~d 101 (157)
T PRK06719 85 MMVKQAAHDF----QWVNVVS 101 (157)
T ss_pred HHHHHHHHHC----CcEEECC
Confidence 7776655442 3566554
|
|
| >TIGR01915 npdG NADPH-dependent F420 reductase | Back alignment and domain information |
|---|
Probab=96.37 E-value=0.0099 Score=47.47 Aligned_cols=43 Identities=28% Similarity=0.308 Sum_probs=37.6
Q ss_pred EEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHH
Q 025672 14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAAL 56 (249)
Q Consensus 14 ~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~ 56 (249)
++.|+||+|.+|.+++..|++.|++|++.+|++++.+.+.++.
T Consensus 2 kI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~~~~l~~~~ 44 (219)
T TIGR01915 2 KIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKAEEAAAKA 44 (219)
T ss_pred EEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHHHHHHHHHH
Confidence 4889999999999999999999999999999988877665543
|
This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase. |
| >PRK05442 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.36 E-value=0.025 Score=47.97 Aligned_cols=116 Identities=12% Similarity=0.176 Sum_probs=70.3
Q ss_pred CcEEEEecCCCchhHHHHHHHHHcCC-------eEEEEeCCcc--hHHHHHHHHHhcC----CCeeEEEccCCCHHHHHH
Q 025672 12 GKVALLTGGGSGIGFEISLQLGKHGA-------AIAIMGRRKT--VLRSAVAALHSLG----IPAIGLEGDVRKREDAVR 78 (249)
Q Consensus 12 ~k~~lItGa~~giG~~~a~~l~~~G~-------~v~l~~r~~~--~~~~~~~~~~~~~----~~~~~~~~Dl~~~~~~~~ 78 (249)
.+.+.|+|++|.+|..++..|+..|. .++|+|.++. .++....++.+.. ..+.+ +
T Consensus 4 ~~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~~~~~i-----~------- 71 (326)
T PRK05442 4 PVRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFPLLAGVVI-----T------- 71 (326)
T ss_pred CcEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhhhhhcCCcEE-----e-------
Confidence 45789999999999999999998764 6999998543 3444444443221 11111 1
Q ss_pred HHHHHHHHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccc
Q 025672 79 VVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISAT 157 (249)
Q Consensus 79 ~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~ 157 (249)
....+.+..-|+||.+||... ++ ..+ -.+.++.|+ .+++.+.+.+.+.... .+.++.+|..
T Consensus 72 --~~~y~~~~daDiVVitaG~~~-k~--g~t---R~dll~~Na----~i~~~i~~~i~~~~~~------~~iiivvsNP 132 (326)
T PRK05442 72 --DDPNVAFKDADVALLVGARPR-GP--GME---RKDLLEANG----AIFTAQGKALNEVAAR------DVKVLVVGNP 132 (326)
T ss_pred --cChHHHhCCCCEEEEeCCCCC-CC--CCc---HHHHHHHHH----HHHHHHHHHHHHhCCC------CeEEEEeCCc
Confidence 111233457899999999632 22 123 344566665 4566666666663211 3777777754
|
|
| >TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family | Back alignment and domain information |
|---|
Probab=96.34 E-value=0.019 Score=47.90 Aligned_cols=79 Identities=22% Similarity=0.271 Sum_probs=52.7
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCc
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 90 (249)
++++++|+|+++++|..++..+...|++|+++.+++++.+.+ .++ +... + .+..+.+..+.+.... . ..++
T Consensus 139 ~~~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~---g~~~-~--~~~~~~~~~~~~~~~~-~-~~~~ 209 (325)
T TIGR02824 139 AGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKCAAC-EAL---GADI-A--INYREEDFVEVVKAET-G-GKGV 209 (325)
T ss_pred CCCEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHc---CCcE-E--EecCchhHHHHHHHHc-C-CCCe
Confidence 578999999999999999999999999999998887665433 332 3221 1 2333333333322211 1 1359
Q ss_pred cEEEEcCC
Q 025672 91 DILVNAAA 98 (249)
Q Consensus 91 d~vi~~ag 98 (249)
|.+|+++|
T Consensus 210 d~~i~~~~ 217 (325)
T TIGR02824 210 DVILDIVG 217 (325)
T ss_pred EEEEECCc
Confidence 99999887
|
Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized. |
| >cd05292 LDH_2 A subgroup of L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=96.31 E-value=0.064 Score=45.21 Aligned_cols=112 Identities=13% Similarity=0.118 Sum_probs=68.1
Q ss_pred EEEEecCCCchhHHHHHHHHHcC--CeEEEEeCCcchHHHHHHHHHhcC---CCeeEEEccCCCHHHHHHHHHHHHHHhC
Q 025672 14 VALLTGGGSGIGFEISLQLGKHG--AAIAIMGRRKTVLRSAVAALHSLG---IPAIGLEGDVRKREDAVRVVESTINHFG 88 (249)
Q Consensus 14 ~~lItGa~~giG~~~a~~l~~~G--~~v~l~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 88 (249)
.+.|.|+ |.+|..++..|+.+| .+|++++++++..+....++.+.. ....+.. .+. +.+.
T Consensus 2 kI~IIGa-G~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~~~i~~---~d~-----------~~l~ 66 (308)
T cd05292 2 KVAIVGA-GFVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTPFVKPVRIYA---GDY-----------ADCK 66 (308)
T ss_pred EEEEECC-CHHHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHccccccCCeEEee---CCH-----------HHhC
Confidence 4789998 799999999999999 479999999887765444454321 1111111 121 1234
Q ss_pred CccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccc
Q 025672 89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISAT 157 (249)
Q Consensus 89 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~ 157 (249)
.-|++|.++|..... .++..+.+..|+. +++.+.+.+.+... .|.++.++..
T Consensus 67 ~aDiViita~~~~~~------~~~r~dl~~~n~~----i~~~~~~~l~~~~~-------~giiiv~tNP 118 (308)
T cd05292 67 GADVVVITAGANQKP------GETRLDLLKRNVA----IFKEIIPQILKYAP-------DAILLVVTNP 118 (308)
T ss_pred CCCEEEEccCCCCCC------CCCHHHHHHHHHH----HHHHHHHHHHHHCC-------CeEEEEecCc
Confidence 689999999964321 1122344555543 45555555544332 3777777653
|
L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.31 E-value=0.04 Score=45.46 Aligned_cols=80 Identities=13% Similarity=0.159 Sum_probs=57.4
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhC-C
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG-K 89 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~-~ 89 (249)
+|+|++|.||+|.+|.-+-.--.-.|++|+...-+.++..-+..++.- . ...|-.++.++++++.+. ++ .
T Consensus 153 ~geTv~VSaAsGAvGql~GQ~Ak~~Gc~VVGsaGS~EKv~ll~~~~G~---d---~afNYK~e~~~~~aL~r~---~P~G 223 (343)
T KOG1196|consen 153 KGETVFVSAASGAVGQLVGQFAKLMGCYVVGSAGSKEKVDLLKTKFGF---D---DAFNYKEESDLSAALKRC---FPEG 223 (343)
T ss_pred CCCEEEEeeccchhHHHHHHHHHhcCCEEEEecCChhhhhhhHhccCC---c---cceeccCccCHHHHHHHh---CCCc
Confidence 579999999999999866555555799999988888776666665521 1 112455555666666553 43 7
Q ss_pred ccEEEEcCCC
Q 025672 90 LDILVNAAAG 99 (249)
Q Consensus 90 id~vi~~ag~ 99 (249)
||+.+-|.|.
T Consensus 224 IDiYfeNVGG 233 (343)
T KOG1196|consen 224 IDIYFENVGG 233 (343)
T ss_pred ceEEEeccCc
Confidence 9999999995
|
|
| >cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins | Back alignment and domain information |
|---|
Probab=96.29 E-value=0.025 Score=37.96 Aligned_cols=36 Identities=28% Similarity=0.491 Sum_probs=31.8
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHc-CCeEEEEeC
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKH-GAAIAIMGR 44 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~-G~~v~l~~r 44 (249)
.++++|+++|.|+ |++|+.++..|.+. +.+|.+++|
T Consensus 19 ~~~~~~~v~i~G~-G~~g~~~a~~l~~~~~~~v~v~~r 55 (86)
T cd05191 19 KSLKGKTVVVLGA-GEVGKGIAKLLADEGGKKVVLCDR 55 (86)
T ss_pred CCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcC
Confidence 4578999999999 99999999999998 567888877
|
Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al |
| >PRK13243 glyoxylate reductase; Reviewed | Back alignment and domain information |
|---|
Probab=96.29 E-value=0.042 Score=46.85 Aligned_cols=39 Identities=21% Similarity=0.204 Sum_probs=35.3
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcc
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT 47 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~ 47 (249)
..++||++.|.|- |.||+.+|+.|...|++|+..+|+..
T Consensus 146 ~~L~gktvgIiG~-G~IG~~vA~~l~~~G~~V~~~d~~~~ 184 (333)
T PRK13243 146 YDVYGKTIGIIGF-GRIGQAVARRAKGFGMRILYYSRTRK 184 (333)
T ss_pred cCCCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCC
Confidence 4689999999997 79999999999999999999998754
|
|
| >PRK05600 thiamine biosynthesis protein ThiF; Validated | Back alignment and domain information |
|---|
Probab=96.28 E-value=0.042 Score=47.51 Aligned_cols=36 Identities=25% Similarity=0.471 Sum_probs=31.3
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCC-eEEEEeCC
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRR 45 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~-~v~l~~r~ 45 (249)
.+++++|+|.|++ |+|..+++.|+..|. +++++|.+
T Consensus 38 ~l~~~~VliiG~G-glG~~v~~~La~~Gvg~i~ivD~D 74 (370)
T PRK05600 38 RLHNARVLVIGAG-GLGCPAMQSLASAGVGTITLIDDD 74 (370)
T ss_pred HhcCCcEEEECCC-HHHHHHHHHHHHcCCCEEEEEeCC
Confidence 3678889999875 999999999999998 79999875
|
|
| >PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=96.27 E-value=0.013 Score=45.27 Aligned_cols=43 Identities=16% Similarity=0.297 Sum_probs=35.7
Q ss_pred EEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHH
Q 025672 14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALH 57 (249)
Q Consensus 14 ~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~ 57 (249)
++.|.|+ |-+|+.+|..++..|++|++.+++++.++...+.+.
T Consensus 1 ~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~~~~i~ 43 (180)
T PF02737_consen 1 KVAVIGA-GTMGRGIAALFARAGYEVTLYDRSPEALERARKRIE 43 (180)
T ss_dssp EEEEES--SHHHHHHHHHHHHTTSEEEEE-SSHHHHHHHHHHHH
T ss_pred CEEEEcC-CHHHHHHHHHHHhCCCcEEEEECChHHHHhhhhHHH
Confidence 4678888 899999999999999999999999998877666654
|
1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B .... |
| >PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF) | Back alignment and domain information |
|---|
Probab=96.25 E-value=0.011 Score=44.56 Aligned_cols=45 Identities=24% Similarity=0.383 Sum_probs=34.8
Q ss_pred CCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHH
Q 025672 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRS 51 (249)
Q Consensus 7 ~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~ 51 (249)
..+++||.++|.|.+.-+|+-++..|.++|+.|.++..+...+++
T Consensus 31 ~~~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T~~l~~ 75 (160)
T PF02882_consen 31 GIDLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKTKNLQE 75 (160)
T ss_dssp T-STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTSSSHHH
T ss_pred CCCCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCCCcccc
Confidence 346899999999999999999999999999999998877654443
|
Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A .... |
| >cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2 | Back alignment and domain information |
|---|
Probab=96.25 E-value=0.011 Score=47.49 Aligned_cols=37 Identities=19% Similarity=0.335 Sum_probs=33.6
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCe---EEEEeCC
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAA---IAIMGRR 45 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~---v~l~~r~ 45 (249)
.++++++++|.|+ |+.|++++..|.+.|.+ +++++|+
T Consensus 21 ~~l~~~rvlvlGA-GgAg~aiA~~L~~~G~~~~~i~ivdr~ 60 (226)
T cd05311 21 KKIEEVKIVINGA-GAAGIAIARLLLAAGAKPENIVVVDSK 60 (226)
T ss_pred CCccCCEEEEECc-hHHHHHHHHHHHHcCcCcceEEEEeCC
Confidence 3588999999998 79999999999999974 9999998
|
Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph |
| >cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=96.24 E-value=0.029 Score=46.85 Aligned_cols=79 Identities=19% Similarity=0.214 Sum_probs=52.4
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCc
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 90 (249)
++++++|+|+++++|..++..+...|++++.++++.++.+.+ .++ +.. .++ |.... ++...+.+... ...+
T Consensus 144 ~~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~---g~~-~~~--~~~~~-~~~~~~~~~~~-~~~~ 214 (328)
T cd08268 144 PGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRDAL-LAL---GAA-HVI--VTDEE-DLVAEVLRITG-GKGV 214 (328)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHc---CCC-EEE--ecCCc-cHHHHHHHHhC-CCCc
Confidence 578999999999999999999999999999999887665544 222 321 222 22222 22222222211 1259
Q ss_pred cEEEEcCC
Q 025672 91 DILVNAAA 98 (249)
Q Consensus 91 d~vi~~ag 98 (249)
|.++++.|
T Consensus 215 d~vi~~~~ 222 (328)
T cd08268 215 DVVFDPVG 222 (328)
T ss_pred eEEEECCc
Confidence 99999887
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.24 E-value=0.014 Score=48.34 Aligned_cols=40 Identities=28% Similarity=0.331 Sum_probs=36.3
Q ss_pred CCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCc
Q 025672 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK 46 (249)
Q Consensus 7 ~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~ 46 (249)
...++||.++|+|.+.-+|+.++..|..+|++|+++.++.
T Consensus 153 ~i~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t 192 (286)
T PRK14175 153 DIDLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRS 192 (286)
T ss_pred CCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc
Confidence 3468999999999999999999999999999999998754
|
|
| >PLN02740 Alcohol dehydrogenase-like | Back alignment and domain information |
|---|
Probab=96.22 E-value=0.034 Score=48.21 Aligned_cols=78 Identities=14% Similarity=0.222 Sum_probs=52.9
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCH-HHHHHHHHHHHHHhC
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKR-EDAVRVVESTINHFG 88 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~~~ 88 (249)
.|.+++|.|+ |+||..++..+...|+ +|+.+++++++++.+. ++ |... ++ |..+. +++.+.+.+... +
T Consensus 198 ~g~~VlV~G~-G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a~-~~---Ga~~-~i--~~~~~~~~~~~~v~~~~~--~ 267 (381)
T PLN02740 198 AGSSVAIFGL-GAVGLAVAEGARARGASKIIGVDINPEKFEKGK-EM---GITD-FI--NPKDSDKPVHERIREMTG--G 267 (381)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCCcEEEEcCChHHHHHHH-Hc---CCcE-EE--ecccccchHHHHHHHHhC--C
Confidence 5889999985 8999999998889999 6999998887766553 33 3322 22 44332 233333333322 2
Q ss_pred CccEEEEcCC
Q 025672 89 KLDILVNAAA 98 (249)
Q Consensus 89 ~id~vi~~ag 98 (249)
.+|++|.+.|
T Consensus 268 g~dvvid~~G 277 (381)
T PLN02740 268 GVDYSFECAG 277 (381)
T ss_pred CCCEEEECCC
Confidence 6999999998
|
|
| >cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2 | Back alignment and domain information |
|---|
Probab=96.22 E-value=0.034 Score=46.74 Aligned_cols=33 Identities=30% Similarity=0.409 Sum_probs=27.8
Q ss_pred EEEEecCCCchhHHHHHHHHHcCC-eEEEEeCCcc
Q 025672 14 VALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKT 47 (249)
Q Consensus 14 ~~lItGa~~giG~~~a~~l~~~G~-~v~l~~r~~~ 47 (249)
+|+|.|+ ||+|.++++.|+..|. ++.++|.+.-
T Consensus 1 kVlIVGa-GGlG~EiaKnLal~Gvg~ItIvD~D~V 34 (312)
T cd01489 1 KVLVVGA-GGIGCELLKNLVLTGFGEIHIIDLDTI 34 (312)
T ss_pred CEEEECC-CHHHHHHHHHHHHhcCCeEEEEcCCCc
Confidence 3688886 7999999999999998 6999887543
|
UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2. |
| >KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion] | Back alignment and domain information |
|---|
Probab=96.21 E-value=0.028 Score=46.11 Aligned_cols=84 Identities=20% Similarity=0.279 Sum_probs=66.3
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCc
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 90 (249)
+|-+++--||++++|+++.......|.+-+-+-|+.++.+++.+++...|+.-.+-+-.+.+++- ......++++
T Consensus 160 ~GD~vIQNganS~VG~~ViQlaka~GiktinvVRdR~~ieel~~~Lk~lGA~~ViTeeel~~~~~-----~k~~~~~~~p 234 (354)
T KOG0025|consen 160 KGDSVIQNGANSGVGQAVIQLAKALGIKTINVVRDRPNIEELKKQLKSLGATEVITEEELRDRKM-----KKFKGDNPRP 234 (354)
T ss_pred CCCeeeecCcccHHHHHHHHHHHHhCcceEEEeecCccHHHHHHHHHHcCCceEecHHHhcchhh-----hhhhccCCCc
Confidence 36788889999999999998888899999999999999999999999988765554444444332 2222356789
Q ss_pred cEEEEcCCC
Q 025672 91 DILVNAAAG 99 (249)
Q Consensus 91 d~vi~~ag~ 99 (249)
..-+||.|.
T Consensus 235 rLalNcVGG 243 (354)
T KOG0025|consen 235 RLALNCVGG 243 (354)
T ss_pred eEEEeccCc
Confidence 999999995
|
|
| >cd08300 alcohol_DH_class_III class III alcohol dehydrogenases | Back alignment and domain information |
|---|
Probab=96.19 E-value=0.041 Score=47.45 Aligned_cols=78 Identities=14% Similarity=0.189 Sum_probs=53.9
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCH-HHHHHHHHHHHHHhC
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKR-EDAVRVVESTINHFG 88 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~~~ 88 (249)
.+.++||.|+ +++|..++..+...|+ +|+.+++++++++.+ .++ |... + .|..+. +++.+.+.+... +
T Consensus 186 ~g~~VlV~G~-G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~-~~l---Ga~~-~--i~~~~~~~~~~~~v~~~~~--~ 255 (368)
T cd08300 186 PGSTVAVFGL-GAVGLAVIQGAKAAGASRIIGIDINPDKFELA-KKF---GATD-C--VNPKDHDKPIQQVLVEMTD--G 255 (368)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH-HHc---CCCE-E--EcccccchHHHHHHHHHhC--C
Confidence 4899999975 8999999999989999 699999988876644 333 3322 2 244433 234444444322 3
Q ss_pred CccEEEEcCC
Q 025672 89 KLDILVNAAA 98 (249)
Q Consensus 89 ~id~vi~~ag 98 (249)
.+|+++.+.|
T Consensus 256 g~d~vid~~g 265 (368)
T cd08300 256 GVDYTFECIG 265 (368)
T ss_pred CCcEEEECCC
Confidence 6999999888
|
Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim |
| >TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain | Back alignment and domain information |
|---|
Probab=96.17 E-value=0.056 Score=42.71 Aligned_cols=57 Identities=23% Similarity=0.306 Sum_probs=42.1
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcc-hHHHHHHHHHhcCCCeeEEEccCC
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT-VLRSAVAALHSLGIPAIGLEGDVR 71 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~-~~~~~~~~~~~~~~~~~~~~~Dl~ 71 (249)
+++||.+||.||+ .+|..-++.|++.|++|++++.+.. .++.+ ...+ ++.++.-+..
T Consensus 6 ~l~gk~vlVvGgG-~va~rk~~~Ll~~ga~VtVvsp~~~~~l~~l----~~~~-~i~~~~~~~~ 63 (205)
T TIGR01470 6 NLEGRAVLVVGGG-DVALRKARLLLKAGAQLRVIAEELESELTLL----AEQG-GITWLARCFD 63 (205)
T ss_pred EcCCCeEEEECcC-HHHHHHHHHHHHCCCEEEEEcCCCCHHHHHH----HHcC-CEEEEeCCCC
Confidence 4889999999975 8899999999999999999987654 22222 2222 5667666654
|
This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms. |
| >TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=96.17 E-value=0.045 Score=47.25 Aligned_cols=78 Identities=17% Similarity=0.202 Sum_probs=52.2
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCC-HHHHHHHHHHHHHHhC
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK-REDAVRVVESTINHFG 88 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~ 88 (249)
.+.++||+|+ ++||...+..+...|+ +|+.++++.++++.+ +++ |... + .|..+ .+++...+.++.. +
T Consensus 185 ~g~~VlV~G~-G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a-~~~---Ga~~-~--i~~~~~~~~~~~~v~~~~~--~ 254 (368)
T TIGR02818 185 EGDTVAVFGL-GGIGLSVIQGARMAKASRIIAIDINPAKFELA-KKL---GATD-C--VNPNDYDKPIQEVIVEITD--G 254 (368)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHh---CCCe-E--EcccccchhHHHHHHHHhC--C
Confidence 4789999985 8999999888888998 799999888776654 333 3321 2 24333 2233333333322 3
Q ss_pred CccEEEEcCC
Q 025672 89 KLDILVNAAA 98 (249)
Q Consensus 89 ~id~vi~~ag 98 (249)
.+|++|.+.|
T Consensus 255 g~d~vid~~G 264 (368)
T TIGR02818 255 GVDYSFECIG 264 (368)
T ss_pred CCCEEEECCC
Confidence 6999999988
|
The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols. |
| >PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.12 E-value=0.015 Score=48.37 Aligned_cols=44 Identities=20% Similarity=0.258 Sum_probs=38.5
Q ss_pred CCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHH
Q 025672 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLR 50 (249)
Q Consensus 7 ~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~ 50 (249)
..+++||.+.|.|.++-+|+.++..|.++|++|+++.++...++
T Consensus 154 ~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~~l~ 197 (301)
T PRK14194 154 CGDLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRSTDAK 197 (301)
T ss_pred CCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCCCHH
Confidence 34789999999999999999999999999999999987765333
|
|
| >COG3007 Uncharacterized paraquat-inducible protein B [Function unknown] | Back alignment and domain information |
|---|
Probab=96.11 E-value=0.053 Score=44.53 Aligned_cols=87 Identities=28% Similarity=0.329 Sum_probs=58.2
Q ss_pred CCcEEEEecCCCchhHH--HHHHHHHcCCeEEEEeC-------Ccc-----hHHHHHHHHHhcCCCeeEEEccCCCHHHH
Q 025672 11 KGKVALLTGGGSGIGFE--ISLQLGKHGAAIAIMGR-------RKT-----VLRSAVAALHSLGIPAIGLEGDVRKREDA 76 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~--~a~~l~~~G~~v~l~~r-------~~~-----~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~ 76 (249)
-.|.|||.|+|+|-|.+ ++..|- .|++.+.+.. +.. .-....+.....|--..-+..|.-+.+--
T Consensus 40 gPKkVLviGaSsGyGLa~RIsaaFG-~gAdTiGVffE~pgte~~~gtagwyn~~~f~~~A~~kGlyAksingDaFS~e~k 118 (398)
T COG3007 40 GPKKVLVIGASSGYGLAARISAAFG-PGADTIGVFFERPGTERKPGTAGWYNNAAFKKFAKQKGLYAKSINGDAFSDEMK 118 (398)
T ss_pred CCceEEEEecCCcccHHHHHHHHhC-CCCceeeEEeecCCccCCCcchhhhHHHHHHHHHHhcCceeeecccchhhHHHH
Confidence 36999999999998875 344444 5666555422 111 01122222334454455677898888888
Q ss_pred HHHHHHHHHHhCCccEEEEcCC
Q 025672 77 VRVVESTINHFGKLDILVNAAA 98 (249)
Q Consensus 77 ~~~~~~~~~~~~~id~vi~~ag 98 (249)
+..++.+++.||.+|.||+.-+
T Consensus 119 ~kvIe~Ik~~~g~vDlvvYSlA 140 (398)
T COG3007 119 QKVIEAIKQDFGKVDLVVYSLA 140 (398)
T ss_pred HHHHHHHHHhhccccEEEEecc
Confidence 8999999999999999998644
|
|
| >cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like | Back alignment and domain information |
|---|
Probab=96.09 E-value=0.042 Score=46.65 Aligned_cols=77 Identities=16% Similarity=0.180 Sum_probs=51.6
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCCe-EEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCC
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGAA-IAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK 89 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~~-v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 89 (249)
.+.+++|+|+ |++|..++..+...|++ |+++++++++.+.+ .++ |.. .+ .|..+.+ .+.+.+ ... ...
T Consensus 163 ~g~~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~-~~~---ga~-~~--i~~~~~~-~~~~~~-~~~-~~~ 231 (339)
T cd08239 163 GRDTVLVVGA-GPVGLGALMLARALGAEDVIGVDPSPERLELA-KAL---GAD-FV--INSGQDD-VQEIRE-LTS-GAG 231 (339)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHh---CCC-EE--EcCCcch-HHHHHH-HhC-CCC
Confidence 4889999986 89999999999899998 99998887765543 334 322 12 2444433 333222 111 126
Q ss_pred ccEEEEcCC
Q 025672 90 LDILVNAAA 98 (249)
Q Consensus 90 id~vi~~ag 98 (249)
+|++|.+.|
T Consensus 232 ~d~vid~~g 240 (339)
T cd08239 232 ADVAIECSG 240 (339)
T ss_pred CCEEEECCC
Confidence 999999988
|
MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at |
| >TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent | Back alignment and domain information |
|---|
Probab=96.05 E-value=0.067 Score=46.37 Aligned_cols=117 Identities=14% Similarity=0.089 Sum_probs=72.7
Q ss_pred CcEEEEecCCCchhHHHHHHHHHcCC-e----EEE----EeCCcchHHHHHHHHHhcC-C---CeeEEEccCCCHHHHHH
Q 025672 12 GKVALLTGGGSGIGFEISLQLGKHGA-A----IAI----MGRRKTVLRSAVAALHSLG-I---PAIGLEGDVRKREDAVR 78 (249)
Q Consensus 12 ~k~~lItGa~~giG~~~a~~l~~~G~-~----v~l----~~r~~~~~~~~~~~~~~~~-~---~~~~~~~Dl~~~~~~~~ 78 (249)
.-.+.|+|++|.+|.++|-.|+.+|. . |.| ++++++.++...-++.+.- . .+.+ .. .+
T Consensus 44 p~KV~IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~~~~~~v~i-~~--~~------ 114 (387)
T TIGR01757 44 TVNVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSERSKEALEGVAMELEDSLYPLLREVSI-GI--DP------ 114 (387)
T ss_pred CeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEeccCccchhhhHHHHHHHHhhhhhcCceEE-ec--CC------
Confidence 35789999999999999999998875 3 444 4888888887777775432 1 1111 11 11
Q ss_pred HHHHHHHHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccc
Q 025672 79 VVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL 158 (249)
Q Consensus 79 ~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~ 158 (249)
.+.+..-|++|..||... ++ ..+ -.+.++.|+. +++.+.+.+.+... +.+.||.+|...
T Consensus 115 -----y~~~kdaDIVVitAG~pr-kp--g~t---R~dll~~N~~----I~k~i~~~I~~~a~------~~~iviVVsNPv 173 (387)
T TIGR01757 115 -----YEVFEDADWALLIGAKPR-GP--GME---RADLLDINGQ----IFADQGKALNAVAS------KNCKVLVVGNPC 173 (387)
T ss_pred -----HHHhCCCCEEEECCCCCC-CC--CCC---HHHHHHHHHH----HHHHHHHHHHHhCC------CCeEEEEcCCcH
Confidence 123356899999999632 22 123 3445666654 55566666655321 137777777543
|
This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized. |
| >COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=96.04 E-value=0.062 Score=45.05 Aligned_cols=116 Identities=15% Similarity=0.247 Sum_probs=71.5
Q ss_pred cEEEEecCCCchhHHHHHHHHHcCC--eEEEEeCCcchHHHHHHHHHhcCC---CeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 13 KVALLTGGGSGIGFEISLQLGKHGA--AIAIMGRRKTVLRSAVAALHSLGI---PAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 13 k~~lItGa~~giG~~~a~~l~~~G~--~v~l~~r~~~~~~~~~~~~~~~~~---~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
+.+.|+|+ |+||.+++..|+.++. +++|+|.+++..+....++.+... .-..+..| .+.+ .+
T Consensus 1 ~KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~~~i~~~-~~y~-----------~~ 67 (313)
T COG0039 1 MKVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAAPLGSDVKITGD-GDYE-----------DL 67 (313)
T ss_pred CeEEEECC-ChHHHHHHHHHhcccccceEEEEEcccccccchhcchhhcchhccCceEEecC-CChh-----------hh
Confidence 35789999 9999999999988875 799999997777766666654311 11222222 2211 22
Q ss_pred CCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccc
Q 025672 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL 158 (249)
Q Consensus 88 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~ 158 (249)
..-|++|..||... +| ..+. .+.++.|.. +.+.+.+.+.+..+ .+.++.++...
T Consensus 68 ~~aDiVvitAG~pr-Kp--GmtR---~DLl~~Na~----I~~~i~~~i~~~~~-------d~ivlVvtNPv 121 (313)
T COG0039 68 KGADIVVITAGVPR-KP--GMTR---LDLLEKNAK----IVKDIAKAIAKYAP-------DAIVLVVTNPV 121 (313)
T ss_pred cCCCEEEEeCCCCC-CC--CCCH---HHHHHhhHH----HHHHHHHHHHhhCC-------CeEEEEecCcH
Confidence 46799999998643 22 1333 444666654 44444555544433 36666666644
|
|
| >TIGR01771 L-LDH-NAD L-lactate dehydrogenase | Back alignment and domain information |
|---|
Probab=96.03 E-value=0.26 Score=41.34 Aligned_cols=111 Identities=14% Similarity=0.207 Sum_probs=70.4
Q ss_pred EecCCCchhHHHHHHHHHcCC--eEEEEeCCcchHHHHHHHHHhcC----CCeeEEEccCCCHHHHHHHHHHHHHHhCCc
Q 025672 17 LTGGGSGIGFEISLQLGKHGA--AIAIMGRRKTVLRSAVAALHSLG----IPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (249)
Q Consensus 17 ItGa~~giG~~~a~~l~~~G~--~v~l~~r~~~~~~~~~~~~~~~~----~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 90 (249)
|+|+ |.||..+|..|+.++. +++|+|.+++.++....++.+.. ..+.+. . .+. +.+..-
T Consensus 1 iIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~i~-~--~~~-----------~~~~da 65 (299)
T TIGR01771 1 IIGA-GNVGSSTAFALLNQGIADEIVLIDINKDKAEGEAMDLQHAASFLPTPKKIR-S--GDY-----------SDCKDA 65 (299)
T ss_pred CCCc-CHHHHHHHHHHHhcCCCCEEEEEeCCCChhhHHHHHHHHhhcccCCCeEEe-c--CCH-----------HHHCCC
Confidence 3554 8999999999998886 69999999888887777776532 122222 1 222 223467
Q ss_pred cEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccc
Q 025672 91 DILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH 159 (249)
Q Consensus 91 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~ 159 (249)
|+||..||... ++ ..+. ...++.|+. +++.+.+.+.+..+ .+.++++|....
T Consensus 66 DivVitag~~r-k~--g~~R---~dll~~N~~----i~~~~~~~i~~~~p-------~~~vivvsNP~d 117 (299)
T TIGR01771 66 DLVVITAGAPQ-KP--GETR---LELVGRNVR----IMKSIVPEVVKSGF-------DGIFLVATNPVD 117 (299)
T ss_pred CEEEECCCCCC-CC--CCCH---HHHHHHHHH----HHHHHHHHHHHhCC-------CeEEEEeCCHHH
Confidence 99999999642 22 2233 344566654 45555555554433 377888886543
|
This model represents the NAD-dependent L-lactate dehydrogenases from bacteria and eukaryotes. This enzyme function as as the final step in anaerobic glycolysis. Although lactate dehydrogenases have in some cases been mistaken for malate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of malate dehydrogenases. |
| >PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.02 E-value=0.037 Score=48.51 Aligned_cols=40 Identities=20% Similarity=0.326 Sum_probs=36.0
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchH
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVL 49 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~ 49 (249)
.+.||+++|+|. |.||+.++..|...|++|+++++++.+.
T Consensus 209 ~l~Gk~VlViG~-G~IG~~vA~~lr~~Ga~ViV~d~dp~ra 248 (425)
T PRK05476 209 LIAGKVVVVAGY-GDVGKGCAQRLRGLGARVIVTEVDPICA 248 (425)
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCchhh
Confidence 478999999997 6899999999999999999999987654
|
|
| >PRK14851 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.02 E-value=0.055 Score=50.41 Aligned_cols=36 Identities=17% Similarity=0.173 Sum_probs=31.2
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCC-eEEEEeCC
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRR 45 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~-~v~l~~r~ 45 (249)
.+++++|+|.| .||+|..+++.|+..|. +++++|.+
T Consensus 40 kL~~~~VlIvG-~GGlGs~va~~Lar~GVG~l~LvD~D 76 (679)
T PRK14851 40 RLAEAKVAIPG-MGGVGGVHLITMVRTGIGRFHIADFD 76 (679)
T ss_pred HHhcCeEEEEC-cCHHHHHHHHHHHHhCCCeEEEEcCC
Confidence 46789999998 56999999999999998 68888763
|
|
| >COG2085 Predicted dinucleotide-binding enzymes [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.00 E-value=0.2 Score=39.41 Aligned_cols=71 Identities=27% Similarity=0.292 Sum_probs=47.7
Q ss_pred EEEecCCCchhHHHHHHHHHcCCeEEEEeCCcch-HHHHHHHHHhc-----------CCCeeEEEccCCCHHHHHHHHHH
Q 025672 15 ALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTV-LRSAVAALHSL-----------GIPAIGLEGDVRKREDAVRVVES 82 (249)
Q Consensus 15 ~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~-~~~~~~~~~~~-----------~~~~~~~~~Dl~~~~~~~~~~~~ 82 (249)
....||+|.||.+++++|++.|++|++..|+.++ .+...+.+... .+.+.++.+-. +.+..++++
T Consensus 3 ~~~i~GtGniG~alA~~~a~ag~eV~igs~r~~~~~~a~a~~l~~~i~~~~~~dA~~~aDVVvLAVP~---~a~~~v~~~ 79 (211)
T COG2085 3 IIAIIGTGNIGSALALRLAKAGHEVIIGSSRGPKALAAAAAALGPLITGGSNEDAAALADVVVLAVPF---EAIPDVLAE 79 (211)
T ss_pred EEEEeccChHHHHHHHHHHhCCCeEEEecCCChhHHHHHHHhhccccccCChHHHHhcCCEEEEeccH---HHHHhHHHH
Confidence 3556778899999999999999999998666554 55555555321 23455554443 356666666
Q ss_pred HHHHhC
Q 025672 83 TINHFG 88 (249)
Q Consensus 83 ~~~~~~ 88 (249)
+.+.++
T Consensus 80 l~~~~~ 85 (211)
T COG2085 80 LRDALG 85 (211)
T ss_pred HHHHhC
Confidence 766664
|
|
| >PRK07411 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=95.98 E-value=0.068 Score=46.59 Aligned_cols=36 Identities=33% Similarity=0.454 Sum_probs=31.0
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCC-eEEEEeCC
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRR 45 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~-~v~l~~r~ 45 (249)
.|+..+|+|.|++ |+|..+++.|+..|. +++++|.+
T Consensus 35 ~L~~~~VlivG~G-GlG~~va~~La~~Gvg~l~lvD~D 71 (390)
T PRK07411 35 RLKAASVLCIGTG-GLGSPLLLYLAAAGIGRIGIVDFD 71 (390)
T ss_pred HHhcCcEEEECCC-HHHHHHHHHHHHcCCCEEEEECCC
Confidence 4678899999875 999999999999998 68888763
|
|
| >PRK12550 shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=95.98 E-value=0.017 Score=47.77 Aligned_cols=44 Identities=18% Similarity=0.251 Sum_probs=38.5
Q ss_pred CcEEEEecCCCchhHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHH
Q 025672 12 GKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAAL 56 (249)
Q Consensus 12 ~k~~lItGa~~giG~~~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~ 56 (249)
+++++|.|+ ||.+++++..|.+.|+ +|++++|+.++.+.+++.+
T Consensus 122 ~~~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~ 166 (272)
T PRK12550 122 DLVVALRGS-GGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELY 166 (272)
T ss_pred CCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHh
Confidence 578999986 7999999999999998 5999999998888877655
|
|
| >cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase | Back alignment and domain information |
|---|
Probab=95.96 E-value=0.047 Score=47.85 Aligned_cols=85 Identities=12% Similarity=0.051 Sum_probs=52.8
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCC---eEEEEeCCcchHHHHHHHHHhc----CCCeeEEEccCCCHHHHHHHHHHH
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGA---AIAIMGRRKTVLRSAVAALHSL----GIPAIGLEGDVRKREDAVRVVEST 83 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~---~v~l~~r~~~~~~~~~~~~~~~----~~~~~~~~~Dl~~~~~~~~~~~~~ 83 (249)
.+.+++|.|++|++|...+..+...|+ +|+.++++.++++.+.+.+... |....++ |..+.+++.+.+.+.
T Consensus 175 ~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a~~~~~~~~~~~Ga~~~~i--~~~~~~~~~~~v~~~ 252 (410)
T cd08238 175 PGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARAQRLFPPEAASRGIELLYV--NPATIDDLHATLMEL 252 (410)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHHHHhccccccccCceEEEE--CCCccccHHHHHHHH
Confidence 468999999999999998877766654 7999999988877655432211 2222222 433323333333322
Q ss_pred HHHhCCccEEEEcCC
Q 025672 84 INHFGKLDILVNAAA 98 (249)
Q Consensus 84 ~~~~~~id~vi~~ag 98 (249)
.. ...+|.+|.+.|
T Consensus 253 t~-g~g~D~vid~~g 266 (410)
T cd08238 253 TG-GQGFDDVFVFVP 266 (410)
T ss_pred hC-CCCCCEEEEcCC
Confidence 11 125899998876
|
L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found |
| >cd08244 MDR_enoyl_red Possible enoyl reductase | Back alignment and domain information |
|---|
Probab=95.96 E-value=0.051 Score=45.57 Aligned_cols=79 Identities=19% Similarity=0.253 Sum_probs=53.5
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCc
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 90 (249)
.+.+++|+|+++++|..++..+...|++|+.++++.++.+.+ .++ +.. .++ |..+.+..+.+.+.. ....+
T Consensus 142 ~~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~~~-~~~---g~~-~~~--~~~~~~~~~~~~~~~--~~~~~ 212 (324)
T cd08244 142 PGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTALV-RAL---GAD-VAV--DYTRPDWPDQVREAL--GGGGV 212 (324)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHc---CCC-EEE--ecCCccHHHHHHHHc--CCCCc
Confidence 478999999999999999999999999999999887765544 333 322 122 444433333332211 11259
Q ss_pred cEEEEcCC
Q 025672 91 DILVNAAA 98 (249)
Q Consensus 91 d~vi~~ag 98 (249)
|+++++.|
T Consensus 213 d~vl~~~g 220 (324)
T cd08244 213 TVVLDGVG 220 (324)
T ss_pred eEEEECCC
Confidence 99999877
|
Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr |
| >TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=95.91 E-value=0.072 Score=45.54 Aligned_cols=41 Identities=22% Similarity=0.340 Sum_probs=36.1
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHH
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSA 52 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~ 52 (249)
.+.+++|.|+ |++|..++..+...|++|+++++++++++.+
T Consensus 166 ~g~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~~~~~~~~~~ 206 (349)
T TIGR03201 166 KGDLVIVIGA-GGVGGYMVQTAKAMGAAVVAIDIDPEKLEMM 206 (349)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEcCCHHHHHHH
Confidence 4889999999 9999999998889999999999988876654
|
Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA. |
| >PTZ00075 Adenosylhomocysteinase; Provisional | Back alignment and domain information |
|---|
Probab=95.91 E-value=0.048 Score=48.32 Aligned_cols=41 Identities=20% Similarity=0.311 Sum_probs=36.0
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchH
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVL 49 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~ 49 (249)
..+.||+++|.|.+ .||+.+|+.|...|++|+++++++...
T Consensus 250 ~~LaGKtVgVIG~G-~IGr~vA~rL~a~Ga~ViV~e~dp~~a 290 (476)
T PTZ00075 250 VMIAGKTVVVCGYG-DVGKGCAQALRGFGARVVVTEIDPICA 290 (476)
T ss_pred CCcCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCchhH
Confidence 46899999999977 599999999999999999998876543
|
|
| >cd08290 ETR 2-enoyl thioester reductase (ETR) | Back alignment and domain information |
|---|
Probab=95.91 E-value=0.055 Score=45.90 Aligned_cols=83 Identities=18% Similarity=0.199 Sum_probs=51.5
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCH--HHHHHHHHHHHHHhC
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKR--EDAVRVVESTINHFG 88 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~--~~~~~~~~~~~~~~~ 88 (249)
.+++++|.|+++++|..++..+...|.+++.+.++.+..++..+.+...+... ++ +-.+. .+....+..... +
T Consensus 146 ~g~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~~~g~~~-~~--~~~~~~~~~~~~~i~~~~~--~ 220 (341)
T cd08290 146 PGDWVIQNGANSAVGQAVIQLAKLLGIKTINVVRDRPDLEELKERLKALGADH-VL--TEEELRSLLATELLKSAPG--G 220 (341)
T ss_pred CCCEEEEccchhHHHHHHHHHHHHcCCeEEEEEcCCCcchhHHHHHHhcCCCE-EE--eCcccccccHHHHHHHHcC--C
Confidence 58999999999999999999999999998888776543223333333334332 22 11111 123333322211 2
Q ss_pred CccEEEEcCC
Q 025672 89 KLDILVNAAA 98 (249)
Q Consensus 89 ~id~vi~~ag 98 (249)
.+|.++.+.|
T Consensus 221 ~~d~vld~~g 230 (341)
T cd08290 221 RPKLALNCVG 230 (341)
T ss_pred CceEEEECcC
Confidence 5899999887
|
2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f |
| >PRK08328 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=95.88 E-value=0.042 Score=44.28 Aligned_cols=39 Identities=23% Similarity=0.390 Sum_probs=32.9
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCC-eEEEEeCCcch
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTV 48 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~-~v~l~~r~~~~ 48 (249)
.+++++|+|.|+. |+|.++++.|+..|. +++++|.+.-+
T Consensus 24 ~L~~~~VlIiG~G-GlGs~ia~~La~~Gvg~i~lvD~D~ve 63 (231)
T PRK08328 24 KLKKAKVAVVGVG-GLGSPVAYYLAAAGVGRILLIDEQTPE 63 (231)
T ss_pred HHhCCcEEEECCC-HHHHHHHHHHHHcCCCEEEEEcCCccC
Confidence 3667889999865 999999999999998 69999876554
|
|
| >PRK07877 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=95.88 E-value=0.053 Score=50.74 Aligned_cols=79 Identities=16% Similarity=0.201 Sum_probs=51.5
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCC--eEEEEeCCcc------------------hHHHHHHHHHhcCC--CeeEE
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGA--AIAIMGRRKT------------------VLRSAVAALHSLGI--PAIGL 66 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~--~v~l~~r~~~------------------~~~~~~~~~~~~~~--~~~~~ 66 (249)
.|++++|+|.|+ | +|..++..|+..|. +++++|.+.- +.+.+++.+...+. ++..+
T Consensus 104 ~L~~~~V~IvG~-G-lGs~~a~~LaraGvvG~l~lvD~D~ve~sNLnRq~~~~~diG~~Kv~~a~~~l~~inp~i~v~~~ 181 (722)
T PRK07877 104 RLGRLRIGVVGL-S-VGHAIAHTLAAEGLCGELRLADFDTLELSNLNRVPAGVFDLGVNKAVVAARRIAELDPYLPVEVF 181 (722)
T ss_pred HHhcCCEEEEEe-c-HHHHHHHHHHHccCCCeEEEEcCCEEcccccccccCChhhcccHHHHHHHHHHHHHCCCCEEEEE
Confidence 367899999999 4 99999999999994 8999987422 33334444544433 45555
Q ss_pred EccCCCHHHHHHHHHHHHHHhCCccEEEEcC
Q 025672 67 EGDVRKREDAVRVVESTINHFGKLDILVNAA 97 (249)
Q Consensus 67 ~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~a 97 (249)
...++ .+.++++++ ..|+||.|.
T Consensus 182 ~~~i~-~~n~~~~l~-------~~DlVvD~~ 204 (722)
T PRK07877 182 TDGLT-EDNVDAFLD-------GLDVVVEEC 204 (722)
T ss_pred eccCC-HHHHHHHhc-------CCCEEEECC
Confidence 55555 344555443 356666553
|
|
| >PRK07574 formate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.86 E-value=0.093 Score=45.56 Aligned_cols=38 Identities=18% Similarity=0.287 Sum_probs=34.3
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCc
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK 46 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~ 46 (249)
..++||++.|.|. |.||+.+|+.|...|++|+..+|..
T Consensus 188 ~~L~gktVGIvG~-G~IG~~vA~~l~~fG~~V~~~dr~~ 225 (385)
T PRK07574 188 YDLEGMTVGIVGA-GRIGLAVLRRLKPFDVKLHYTDRHR 225 (385)
T ss_pred eecCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCCC
Confidence 4589999999987 5799999999999999999999875
|
|
| >PLN02586 probable cinnamyl alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=95.86 E-value=0.069 Score=45.98 Aligned_cols=74 Identities=18% Similarity=0.240 Sum_probs=49.1
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCc
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 90 (249)
.+++++|.|+ |+||..++..+...|++|++++.+.++.....+++ |... ++ |..+.+.+.+ ..+.+
T Consensus 183 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~~~~---Ga~~-vi--~~~~~~~~~~-------~~~~~ 248 (360)
T PLN02586 183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISSSSNKEDEAINRL---GADS-FL--VSTDPEKMKA-------AIGTM 248 (360)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCcchhhhHHHhC---CCcE-EE--cCCCHHHHHh-------hcCCC
Confidence 5889999775 89999999988889999888887766554444433 3321 22 3333322222 22468
Q ss_pred cEEEEcCC
Q 025672 91 DILVNAAA 98 (249)
Q Consensus 91 d~vi~~ag 98 (249)
|++|.+.|
T Consensus 249 D~vid~~g 256 (360)
T PLN02586 249 DYIIDTVS 256 (360)
T ss_pred CEEEECCC
Confidence 99999887
|
|
| >PRK08655 prephenate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.84 E-value=0.074 Score=47.10 Aligned_cols=41 Identities=20% Similarity=0.300 Sum_probs=35.4
Q ss_pred EEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHH
Q 025672 14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVA 54 (249)
Q Consensus 14 ~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~ 54 (249)
++.|+||.|++|.++++.|.+.|++|++++|+.+..++.+.
T Consensus 2 kI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a~ 42 (437)
T PRK08655 2 KISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVAK 42 (437)
T ss_pred EEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHHH
Confidence 58999999999999999999999999999998776544443
|
|
| >PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related | Back alignment and domain information |
|---|
Probab=95.84 E-value=0.029 Score=43.26 Aligned_cols=45 Identities=24% Similarity=0.316 Sum_probs=37.0
Q ss_pred CCCCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHH
Q 025672 5 FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLR 50 (249)
Q Consensus 5 ~~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~ 50 (249)
.....++||++.|.|. |.||+++|+.|...|++|+..+|.....+
T Consensus 29 ~~~~~l~g~tvgIiG~-G~IG~~vA~~l~~fG~~V~~~d~~~~~~~ 73 (178)
T PF02826_consen 29 FPGRELRGKTVGIIGY-GRIGRAVARRLKAFGMRVIGYDRSPKPEE 73 (178)
T ss_dssp TTBS-STTSEEEEEST-SHHHHHHHHHHHHTT-EEEEEESSCHHHH
T ss_pred CCccccCCCEEEEEEE-cCCcCeEeeeeecCCceeEEecccCChhh
Confidence 3455689999999976 79999999999999999999999876443
|
All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A .... |
| >PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1 | Back alignment and domain information |
|---|
Probab=95.78 E-value=0.049 Score=41.56 Aligned_cols=44 Identities=18% Similarity=0.195 Sum_probs=33.8
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHH
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSA 52 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~ 52 (249)
..++..+++|+| +|-+|...++.|...|++++..+.+....++.
T Consensus 16 ~~~~p~~vvv~G-~G~vg~gA~~~~~~lGa~v~~~d~~~~~~~~~ 59 (168)
T PF01262_consen 16 GGVPPAKVVVTG-AGRVGQGAAEIAKGLGAEVVVPDERPERLRQL 59 (168)
T ss_dssp TEE-T-EEEEES-TSHHHHHHHHHHHHTT-EEEEEESSHHHHHHH
T ss_pred CCCCCeEEEEEC-CCHHHHHHHHHHhHCCCEEEeccCCHHHHHhh
Confidence 346678899998 56899999999999999999999887655543
|
4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A .... |
| >PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional | Back alignment and domain information |
|---|
Probab=95.77 E-value=0.095 Score=44.23 Aligned_cols=102 Identities=9% Similarity=0.061 Sum_probs=61.0
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHH---------HHHHHHHhcCCCeeEEEccCCCHHHHHH
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLR---------SAVAALHSLGIPAIGLEGDVRKREDAVR 78 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~---------~~~~~~~~~~~~~~~~~~Dl~~~~~~~~ 78 (249)
..+++|++.|.|- |.||+.+|+.|...|++|+..++.....+ .+.+.+. .+.+..+.+-++ ++.+.
T Consensus 132 ~~l~g~tvgIvG~-G~IG~~vA~~l~afG~~V~~~~~~~~~~~~~~~~~~~~~l~e~l~--~aDvvv~~lPlt--~~T~~ 206 (312)
T PRK15469 132 YHREDFTIGILGA-GVLGSKVAQSLQTWGFPLRCWSRSRKSWPGVQSFAGREELSAFLS--QTRVLINLLPNT--PETVG 206 (312)
T ss_pred CCcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCCCCCceeecccccHHHHHh--cCCEEEECCCCC--HHHHH
Confidence 4578999999974 58999999999999999999987654311 1111111 234444444444 45666
Q ss_pred HHH-HHHHHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhh
Q 025672 79 VVE-STINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID 120 (249)
Q Consensus 79 ~~~-~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n 120 (249)
++. +..+.+ +.+.++-|.|... -.+.+++.+.++.+
T Consensus 207 li~~~~l~~m-k~ga~lIN~aRG~-----vVde~aL~~aL~~g 243 (312)
T PRK15469 207 IINQQLLEQL-PDGAYLLNLARGV-----HVVEDDLLAALDSG 243 (312)
T ss_pred HhHHHHHhcC-CCCcEEEECCCcc-----ccCHHHHHHHHhcC
Confidence 664 233333 3455655666432 14555555544443
|
|
| >cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases | Back alignment and domain information |
|---|
Probab=95.77 E-value=0.055 Score=45.49 Aligned_cols=76 Identities=14% Similarity=0.066 Sum_probs=50.6
Q ss_pred CcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCcc
Q 025672 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD 91 (249)
Q Consensus 12 ~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 91 (249)
+.+++|.|+++++|..++......|++|+.+.+++++.+.+ .++ |.. .+ .|..+. . ...+.... .+.+|
T Consensus 147 ~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~---g~~-~v--~~~~~~-~-~~~~~~~~--~~~~d 215 (326)
T cd08289 147 QGPVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAADYL-KKL---GAK-EV--IPREEL-Q-EESIKPLE--KQRWA 215 (326)
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHHHHH-HHc---CCC-EE--EcchhH-H-HHHHHhhc--cCCcC
Confidence 67999999999999999999999999999999887765554 333 321 12 222222 1 12222221 13589
Q ss_pred EEEEcCC
Q 025672 92 ILVNAAA 98 (249)
Q Consensus 92 ~vi~~ag 98 (249)
+++.+.|
T Consensus 216 ~vld~~g 222 (326)
T cd08289 216 GAVDPVG 222 (326)
T ss_pred EEEECCc
Confidence 9988876
|
yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH |
| >PRK13403 ketol-acid reductoisomerase; Provisional | Back alignment and domain information |
|---|
Probab=95.75 E-value=0.11 Score=43.68 Aligned_cols=93 Identities=15% Similarity=0.146 Sum_probs=56.4
Q ss_pred CCCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHH------HHHhcCCCeeEEEccCCCHHHHHHH
Q 025672 6 KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVA------ALHSLGIPAIGLEGDVRKREDAVRV 79 (249)
Q Consensus 6 ~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~------~~~~~~~~~~~~~~Dl~~~~~~~~~ 79 (249)
....|++|++.|+|- |.+|+++|+.|...|++|++..|.....+.... .+.+.-....++.+=+.+++. ..+
T Consensus 10 ~~~~LkgKtVGIIG~-GsIG~amA~nL~d~G~~ViV~~r~~~s~~~A~~~G~~v~sl~Eaak~ADVV~llLPd~~t-~~V 87 (335)
T PRK13403 10 NVELLQGKTVAVIGY-GSQGHAQAQNLRDSGVEVVVGVRPGKSFEVAKADGFEVMSVSEAVRTAQVVQMLLPDEQQ-AHV 87 (335)
T ss_pred ChhhhCcCEEEEEeE-cHHHHHHHHHHHHCcCEEEEEECcchhhHHHHHcCCEECCHHHHHhcCCEEEEeCCChHH-HHH
Confidence 345589999999986 689999999999999999988765332221111 111111122333334445444 455
Q ss_pred H-HHHHHHhCCccEEEEcCCCC
Q 025672 80 V-ESTINHFGKLDILVNAAAGN 100 (249)
Q Consensus 80 ~-~~~~~~~~~id~vi~~ag~~ 100 (249)
+ +++...+.+=.++++.-|+.
T Consensus 88 ~~~eil~~MK~GaiL~f~hgfn 109 (335)
T PRK13403 88 YKAEVEENLREGQMLLFSHGFN 109 (335)
T ss_pred HHHHHHhcCCCCCEEEECCCcc
Confidence 5 34555555445777777753
|
|
| >PRK14967 putative methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=95.74 E-value=0.31 Score=38.92 Aligned_cols=77 Identities=23% Similarity=0.285 Sum_probs=52.4
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCC
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK 89 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 89 (249)
.+.++|-.|+..|. ++..+++.|. +|+.++.++..++...+.+...+.++.++..|+.+. +. -+.
T Consensus 36 ~~~~vLDlGcG~G~---~~~~la~~~~~~v~~vD~s~~~l~~a~~n~~~~~~~~~~~~~d~~~~------~~-----~~~ 101 (223)
T PRK14967 36 PGRRVLDLCTGSGA---LAVAAAAAGAGSVTAVDISRRAVRSARLNALLAGVDVDVRRGDWARA------VE-----FRP 101 (223)
T ss_pred CCCeEEEecCCHHH---HHHHHHHcCCCeEEEEECCHHHHHHHHHHHHHhCCeeEEEECchhhh------cc-----CCC
Confidence 35788999887654 3445556676 899999998877766666654455577777776531 11 147
Q ss_pred ccEEEEcCCCCC
Q 025672 90 LDILVNAAAGNF 101 (249)
Q Consensus 90 id~vi~~ag~~~ 101 (249)
.|.||.|+.+..
T Consensus 102 fD~Vi~npPy~~ 113 (223)
T PRK14967 102 FDVVVSNPPYVP 113 (223)
T ss_pred eeEEEECCCCCC
Confidence 999999987543
|
|
| >cd08301 alcohol_DH_plants Plant alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=95.73 E-value=0.091 Score=45.26 Aligned_cols=78 Identities=15% Similarity=0.251 Sum_probs=52.5
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCH-HHHHHHHHHHHHHhC
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKR-EDAVRVVESTINHFG 88 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~~~ 88 (249)
.+.+++|.|+ +++|..++..+...|+ +|+.++++.++.+.+ +++ |.. .++ |..+. +++.+.+.+... +
T Consensus 187 ~g~~VlV~G~-g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~-~~~---Ga~-~~i--~~~~~~~~~~~~v~~~~~--~ 256 (369)
T cd08301 187 KGSTVAIFGL-GAVGLAVAEGARIRGASRIIGVDLNPSKFEQA-KKF---GVT-EFV--NPKDHDKPVQEVIAEMTG--G 256 (369)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHc---CCc-eEE--cccccchhHHHHHHHHhC--C
Confidence 5889999985 8999999888888998 799999887766544 333 332 222 33332 234444443322 3
Q ss_pred CccEEEEcCC
Q 025672 89 KLDILVNAAA 98 (249)
Q Consensus 89 ~id~vi~~ag 98 (249)
.+|+++.+.|
T Consensus 257 ~~d~vid~~G 266 (369)
T cd08301 257 GVDYSFECTG 266 (369)
T ss_pred CCCEEEECCC
Confidence 6999999887
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the |
| >PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.72 E-value=0.034 Score=46.02 Aligned_cols=40 Identities=18% Similarity=0.277 Sum_probs=35.5
Q ss_pred CCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCc
Q 025672 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK 46 (249)
Q Consensus 7 ~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~ 46 (249)
..+++||.++|.|.+.-+|+-++..|.++|++|.++....
T Consensus 152 ~i~l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs~t 191 (285)
T PRK14191 152 HIEIKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCHILT 191 (285)
T ss_pred CCCCCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEeCCc
Confidence 3468999999999999999999999999999999886543
|
|
| >PLN02928 oxidoreductase family protein | Back alignment and domain information |
|---|
Probab=95.71 E-value=0.075 Score=45.57 Aligned_cols=38 Identities=29% Similarity=0.431 Sum_probs=34.4
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCc
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK 46 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~ 46 (249)
..+.||++.|.|- |.||+.+|+.|...|++|+.++|+.
T Consensus 155 ~~l~gktvGIiG~-G~IG~~vA~~l~afG~~V~~~dr~~ 192 (347)
T PLN02928 155 DTLFGKTVFILGY-GAIGIELAKRLRPFGVKLLATRRSW 192 (347)
T ss_pred cCCCCCEEEEECC-CHHHHHHHHHHhhCCCEEEEECCCC
Confidence 4688999999987 7999999999999999999999863
|
|
| >PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase | Back alignment and domain information |
|---|
Probab=95.68 E-value=0.054 Score=46.98 Aligned_cols=76 Identities=16% Similarity=0.184 Sum_probs=47.8
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHc-CCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCC
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKH-GAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK 89 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~-G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 89 (249)
+.+++.|.||+|-+|.++.+.|.++ ..+|..+.++....+.+.+.. ......|+.+.++++.. .+..
T Consensus 37 ~~~kVaIvGATG~vG~eLlrlL~~hP~~el~~l~s~~saG~~i~~~~------~~l~~~~~~~~~~~~~~------~~~~ 104 (381)
T PLN02968 37 EKKRIFVLGASGYTGAEVRRLLANHPDFEITVMTADRKAGQSFGSVF------PHLITQDLPNLVAVKDA------DFSD 104 (381)
T ss_pred cccEEEEECCCChHHHHHHHHHHhCCCCeEEEEEChhhcCCCchhhC------ccccCccccceecCCHH------HhcC
Confidence 4568999999999999999999998 568888877644332222111 11222344333333321 1235
Q ss_pred ccEEEEcCC
Q 025672 90 LDILVNAAA 98 (249)
Q Consensus 90 id~vi~~ag 98 (249)
+|+|+.+.+
T Consensus 105 ~DvVf~Alp 113 (381)
T PLN02968 105 VDAVFCCLP 113 (381)
T ss_pred CCEEEEcCC
Confidence 899999776
|
|
| >cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase) | Back alignment and domain information |
|---|
Probab=95.68 E-value=0.087 Score=45.47 Aligned_cols=77 Identities=19% Similarity=0.229 Sum_probs=50.4
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCC
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK 89 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 89 (249)
.+.+++|.|+ +++|..++..+...|+ +|+.+++++++++.+ +++ |.. .+ .|..+++-.+.+ .+.. .+.
T Consensus 191 ~g~~VlV~G~-G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a-~~~---Ga~-~~--i~~~~~~~~~~i-~~~~--~~g 259 (371)
T cd08281 191 PGQSVAVVGL-GGVGLSALLGAVAAGASQVVAVDLNEDKLALA-REL---GAT-AT--VNAGDPNAVEQV-RELT--GGG 259 (371)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHH-HHc---CCc-eE--eCCCchhHHHHH-HHHh--CCC
Confidence 4789999985 8999998888888999 698899888776544 333 332 12 243333222222 2221 136
Q ss_pred ccEEEEcCC
Q 025672 90 LDILVNAAA 98 (249)
Q Consensus 90 id~vi~~ag 98 (249)
+|++|.+.|
T Consensus 260 ~d~vid~~G 268 (371)
T cd08281 260 VDYAFEMAG 268 (371)
T ss_pred CCEEEECCC
Confidence 999999987
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd |
| >cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like | Back alignment and domain information |
|---|
Probab=95.67 E-value=0.098 Score=42.21 Aligned_cols=32 Identities=31% Similarity=0.485 Sum_probs=27.1
Q ss_pred EEEecCCCchhHHHHHHHHHcCC-eEEEEeCCcc
Q 025672 15 ALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKT 47 (249)
Q Consensus 15 ~lItGa~~giG~~~a~~l~~~G~-~v~l~~r~~~ 47 (249)
++|.| .||+|.++++.|+..|. ++.++|.+.-
T Consensus 2 VlvvG-~GGlG~eilk~La~~Gvg~i~ivD~D~V 34 (234)
T cd01484 2 VLLVG-AGGIGCELLKNLALMGFGQIHVIDMDTI 34 (234)
T ss_pred EEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCEE
Confidence 67777 56999999999999998 6999987644
|
E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou |
| >PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated | Back alignment and domain information |
|---|
Probab=95.63 E-value=0.11 Score=45.28 Aligned_cols=35 Identities=31% Similarity=0.493 Sum_probs=30.4
Q ss_pred CCCcEEEEecCCCchhHHHHHHHHHcCC-eEEEEeCC
Q 025672 10 LKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRR 45 (249)
Q Consensus 10 l~~k~~lItGa~~giG~~~a~~l~~~G~-~v~l~~r~ 45 (249)
|++.+|+|.|+. |+|..+++.|+..|. ++.++|.+
T Consensus 40 L~~~~VlviG~G-GlGs~va~~La~~Gvg~i~lvD~D 75 (392)
T PRK07878 40 LKNARVLVIGAG-GLGSPTLLYLAAAGVGTLGIVEFD 75 (392)
T ss_pred HhcCCEEEECCC-HHHHHHHHHHHHcCCCeEEEECCC
Confidence 568889999865 999999999999998 68888863
|
|
| >cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR) | Back alignment and domain information |
|---|
Probab=95.62 E-value=0.084 Score=44.04 Aligned_cols=76 Identities=18% Similarity=0.244 Sum_probs=51.1
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCc
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 90 (249)
++.+++|.|+++++|..++......|++|+.+.++.++.+.+ .++ +... ++. + +. ++..-+.+. -.++
T Consensus 142 ~g~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~---g~~~-~~~-~--~~-~~~~~i~~~---~~~~ 209 (320)
T cd08243 142 PGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPERAALL-KEL---GADE-VVI-D--DG-AIAEQLRAA---PGGF 209 (320)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-Hhc---CCcE-EEe-c--Cc-cHHHHHHHh---CCCc
Confidence 578999999999999999999999999999888887655444 322 3321 221 1 21 222222222 2469
Q ss_pred cEEEEcCC
Q 025672 91 DILVNAAA 98 (249)
Q Consensus 91 d~vi~~ag 98 (249)
|.++.+.|
T Consensus 210 d~vl~~~~ 217 (320)
T cd08243 210 DKVLELVG 217 (320)
T ss_pred eEEEECCC
Confidence 99999887
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. |
| >cd01076 NAD_bind_1_Glu_DH NAD(P) binding domain of glutamate dehydrogenase, subgroup 1 | Back alignment and domain information |
|---|
Probab=95.62 E-value=0.04 Score=44.27 Aligned_cols=36 Identities=19% Similarity=0.211 Sum_probs=31.5
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEE-EEeC
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIA-IMGR 44 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~-l~~r 44 (249)
.++++++++|.| .|.+|+.+++.|.+.|++|+ +.+.
T Consensus 27 ~~l~~~~v~I~G-~G~VG~~~a~~L~~~g~~vv~v~D~ 63 (227)
T cd01076 27 IGLAGARVAIQG-FGNVGSHAARFLHEAGAKVVAVSDS 63 (227)
T ss_pred CCccCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEECC
Confidence 457899999997 69999999999999999988 5555
|
Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. Glutamate DH is a multidomain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids |
| >cd08241 QOR1 Quinone oxidoreductase (QOR) | Back alignment and domain information |
|---|
Probab=95.60 E-value=0.072 Score=44.30 Aligned_cols=79 Identities=22% Similarity=0.284 Sum_probs=51.3
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCc
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 90 (249)
++.+++|+|+++++|..++..+...|++|+.++++.++.+.+. + .+.. .++ +..+.+..+. +..... -..+
T Consensus 139 ~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~---~g~~-~~~--~~~~~~~~~~-i~~~~~-~~~~ 209 (323)
T cd08241 139 PGETVLVLGAAGGVGLAAVQLAKALGARVIAAASSEEKLALAR-A---LGAD-HVI--DYRDPDLRER-VKALTG-GRGV 209 (323)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHhCCEEEEEeCCHHHHHHHH-H---cCCc-eee--ecCCccHHHH-HHHHcC-CCCc
Confidence 5789999999999999999999999999999988876554442 2 2322 122 2222222222 222211 1359
Q ss_pred cEEEEcCC
Q 025672 91 DILVNAAA 98 (249)
Q Consensus 91 d~vi~~ag 98 (249)
|.++++.|
T Consensus 210 d~v~~~~g 217 (323)
T cd08241 210 DVVYDPVG 217 (323)
T ss_pred EEEEECcc
Confidence 99999887
|
QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic |
| >PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.58 E-value=0.035 Score=46.32 Aligned_cols=39 Identities=23% Similarity=0.271 Sum_probs=35.3
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEe-CCc
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMG-RRK 46 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~-r~~ 46 (249)
.+++||.++|.|-++-+|+.+|..|.++|+.|+++. |+.
T Consensus 154 i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~ 193 (296)
T PRK14188 154 GDLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTR 193 (296)
T ss_pred CCCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCC
Confidence 468999999999999999999999999999999995 543
|
|
| >cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members | Back alignment and domain information |
|---|
Probab=95.58 E-value=0.098 Score=44.06 Aligned_cols=79 Identities=15% Similarity=0.166 Sum_probs=52.3
Q ss_pred CCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCC
Q 025672 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK 89 (249)
Q Consensus 10 l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 89 (249)
.++.+++|.|+++++|..++......|.+|+.+.++.++.+.+ .++ +.. .++ |..+ .+....+.+... ..
T Consensus 138 ~~~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~---g~~-~v~--~~~~-~~~~~~~~~~~~--~~ 207 (329)
T cd08250 138 KSGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFL-KSL---GCD-RPI--NYKT-EDLGEVLKKEYP--KG 207 (329)
T ss_pred CCCCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHHHH-HHc---CCc-eEE--eCCC-ccHHHHHHHhcC--CC
Confidence 3578999999999999999998888999999988877665544 223 321 122 2222 223333332221 36
Q ss_pred ccEEEEcCC
Q 025672 90 LDILVNAAA 98 (249)
Q Consensus 90 id~vi~~ag 98 (249)
+|.++++.|
T Consensus 208 vd~v~~~~g 216 (329)
T cd08250 208 VDVVYESVG 216 (329)
T ss_pred CeEEEECCc
Confidence 899998877
|
Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. |
| >cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2 | Back alignment and domain information |
|---|
Probab=95.56 E-value=0.056 Score=45.37 Aligned_cols=79 Identities=14% Similarity=0.220 Sum_probs=52.3
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCc
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 90 (249)
.+.+++|.|+++++|..++......|++++.+.++.++.+.+.+ + +.. .++ +-.+. +....+.+.... .++
T Consensus 139 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~~~-~---g~~-~~~--~~~~~-~~~~~i~~~~~~-~~~ 209 (324)
T cd08292 139 PGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGVAELRA-L---GIG-PVV--STEQP-GWQDKVREAAGG-API 209 (324)
T ss_pred CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHHHHHHh-c---CCC-EEE--cCCCc-hHHHHHHHHhCC-CCC
Confidence 57899999999999999999999999999988877766555443 2 322 222 22332 222222222111 259
Q ss_pred cEEEEcCC
Q 025672 91 DILVNAAA 98 (249)
Q Consensus 91 d~vi~~ag 98 (249)
|+++.+.|
T Consensus 210 d~v~d~~g 217 (324)
T cd08292 210 SVALDSVG 217 (324)
T ss_pred cEEEECCC
Confidence 99999887
|
2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina |
| >COG2263 Predicted RNA methylase [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=95.55 E-value=0.26 Score=38.08 Aligned_cols=80 Identities=24% Similarity=0.211 Sum_probs=61.9
Q ss_pred CCCCCCCcEEEEecCCCchhHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHH
Q 025672 6 KGDILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTI 84 (249)
Q Consensus 6 ~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 84 (249)
...+++||+|+=.|+..|+ ++...+-.|+ +|+.++.+++.++-..+.....+.++.++.+|+++..
T Consensus 40 ~~g~l~g~~V~DlG~GTG~---La~ga~~lGa~~V~~vdiD~~a~ei~r~N~~~l~g~v~f~~~dv~~~~---------- 106 (198)
T COG2263 40 LRGDLEGKTVLDLGAGTGI---LAIGAALLGASRVLAVDIDPEALEIARANAEELLGDVEFVVADVSDFR---------- 106 (198)
T ss_pred HcCCcCCCEEEEcCCCcCH---HHHHHHhcCCcEEEEEecCHHHHHHHHHHHHhhCCceEEEEcchhhcC----------
Confidence 3457899999999988764 3344445675 6999999999888877777766778999999998754
Q ss_pred HHhCCccEEEEcCCCCC
Q 025672 85 NHFGKLDILVNAAAGNF 101 (249)
Q Consensus 85 ~~~~~id~vi~~ag~~~ 101 (249)
++.|.+|.|+-+..
T Consensus 107 ---~~~dtvimNPPFG~ 120 (198)
T COG2263 107 ---GKFDTVIMNPPFGS 120 (198)
T ss_pred ---CccceEEECCCCcc
Confidence 47889999987644
|
|
| >PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=95.54 E-value=0.18 Score=42.72 Aligned_cols=41 Identities=17% Similarity=0.059 Sum_probs=34.0
Q ss_pred cEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHH
Q 025672 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVA 54 (249)
Q Consensus 13 k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~ 54 (249)
|++.|.|+ |-+|..+|..|+..|++|++.+++++.++...+
T Consensus 8 ~~VaVIGa-G~MG~giA~~~a~aG~~V~l~D~~~~~~~~~~~ 48 (321)
T PRK07066 8 KTFAAIGS-GVIGSGWVARALAHGLDVVAWDPAPGAEAALRA 48 (321)
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHH
Confidence 56777775 689999999999999999999999876655443
|
|
| >TIGR00537 hemK_rel_arch HemK-related putative methylase | Back alignment and domain information |
|---|
Probab=95.53 E-value=0.62 Score=35.72 Aligned_cols=77 Identities=18% Similarity=0.183 Sum_probs=57.0
Q ss_pred CCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCC
Q 025672 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK 89 (249)
Q Consensus 10 l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 89 (249)
.+++++|=.|+..|. ++..+++.|.+|+.++.+++.++...+.+...+.++.++.+|+.+.. .+.
T Consensus 18 ~~~~~vLdlG~G~G~---~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~------------~~~ 82 (179)
T TIGR00537 18 LKPDDVLEIGAGTGL---VAIRLKGKGKCILTTDINPFAVKELRENAKLNNVGLDVVMTDLFKGV------------RGK 82 (179)
T ss_pred cCCCeEEEeCCChhH---HHHHHHhcCCEEEEEECCHHHHHHHHHHHHHcCCceEEEEccccccc------------CCc
Confidence 456778888887774 55666677778999999998888777777655667888888876521 146
Q ss_pred ccEEEEcCCCCC
Q 025672 90 LDILVNAAAGNF 101 (249)
Q Consensus 90 id~vi~~ag~~~ 101 (249)
.|.|+.|.-..+
T Consensus 83 fD~Vi~n~p~~~ 94 (179)
T TIGR00537 83 FDVILFNPPYLP 94 (179)
T ss_pred ccEEEECCCCCC
Confidence 899999876543
|
The gene hemK from E. coli was found to contribute to heme biosynthesis and originally suggested to be protoporphyrinogen oxidase (Medline 95189105). Functional analysis of the nearest homolog in Saccharomyces cerevisiae, YNL063w, finds it is not protoporphyrinogen oxidase and sequence analysis suggests that HemK homologs have S-adenosyl-methionine-dependent methyltransferase activity (Medline 99237242). Homologs are found, usually in a single copy, in nearly all completed genomes, but varying somewhat in apparent domain architecture. This model represents an archaeal and eukaryotic protein family that lacks an N-terminal domain found in HemK and its eubacterial homologs. It is found in a single copy in the first six completed archaeal and eukaryotic genomes. |
| >PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.53 E-value=0.04 Score=45.63 Aligned_cols=42 Identities=24% Similarity=0.354 Sum_probs=36.5
Q ss_pred CCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcch
Q 025672 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTV 48 (249)
Q Consensus 7 ~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~ 48 (249)
..+++||+++|.|.+.-+|+-++..|.++|++|+++.++...
T Consensus 153 ~i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~t~~ 194 (285)
T PRK14189 153 GIPLRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSKTRD 194 (285)
T ss_pred CCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEecCCCCC
Confidence 346899999999999999999999999999999987765443
|
|
| >TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating) | Back alignment and domain information |
|---|
Probab=95.51 E-value=0.24 Score=41.54 Aligned_cols=84 Identities=15% Similarity=0.058 Sum_probs=55.0
Q ss_pred EEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHH----------HhcCCCeeEEEccCCCHHHHHHHHHHH
Q 025672 14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAAL----------HSLGIPAIGLEGDVRKREDAVRVVEST 83 (249)
Q Consensus 14 ~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~----------~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 83 (249)
++.|.| .|-+|..+++.|++.|++|++.+|+.++.+.+.+.- ...-....++-+=+.+. .++.+++++
T Consensus 2 ~Ig~IG-lG~mG~~la~~L~~~g~~V~~~dr~~~~~~~l~~~g~~~~~s~~~~~~~~~~~dvIi~~vp~~-~~~~v~~~l 79 (298)
T TIGR00872 2 QLGLIG-LGRMGANIVRRLAKRGHDCVGYDHDQDAVKAMKEDRTTGVANLRELSQRLSAPRVVWVMVPHG-IVDAVLEEL 79 (298)
T ss_pred EEEEEc-chHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCcccCCHHHHHhhcCCCCEEEEEcCch-HHHHHHHHH
Confidence 467777 478999999999999999999999988776655421 11001112232334454 777777777
Q ss_pred HHHhCCccEEEEcCCC
Q 025672 84 INHFGKLDILVNAAAG 99 (249)
Q Consensus 84 ~~~~~~id~vi~~ag~ 99 (249)
.....+=++||++...
T Consensus 80 ~~~l~~g~ivid~st~ 95 (298)
T TIGR00872 80 APTLEKGDIVIDGGNS 95 (298)
T ss_pred HhhCCCCCEEEECCCC
Confidence 6655444677776553
|
This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle. |
| >cd05282 ETR_like 2-enoyl thioester reductase-like | Back alignment and domain information |
|---|
Probab=95.51 E-value=0.11 Score=43.58 Aligned_cols=80 Identities=18% Similarity=0.140 Sum_probs=52.7
Q ss_pred CCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCC
Q 025672 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK 89 (249)
Q Consensus 10 l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 89 (249)
-.+.+++|.|+++++|..++..+...|++++.+.++.++.+.+ .++ +.. .++ |..+.+..+.+ .+... ..+
T Consensus 137 ~~~~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~---g~~-~~~--~~~~~~~~~~~-~~~~~-~~~ 207 (323)
T cd05282 137 PPGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQVEEL-KAL---GAD-EVI--DSSPEDLAQRV-KEATG-GAG 207 (323)
T ss_pred CCCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecChHHHHHH-Hhc---CCC-EEe--cccchhHHHHH-HHHhc-CCC
Confidence 3578999999999999999999999999999988887665544 333 321 121 33332222222 22211 136
Q ss_pred ccEEEEcCC
Q 025672 90 LDILVNAAA 98 (249)
Q Consensus 90 id~vi~~ag 98 (249)
+|.++.+.|
T Consensus 208 ~d~vl~~~g 216 (323)
T cd05282 208 ARLALDAVG 216 (323)
T ss_pred ceEEEECCC
Confidence 999999887
|
2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman |
| >cd08230 glucose_DH Glucose dehydrogenase | Back alignment and domain information |
|---|
Probab=95.50 E-value=0.093 Score=44.94 Aligned_cols=73 Identities=25% Similarity=0.408 Sum_probs=48.2
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCC---cchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR---KTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~---~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
.+++++|+|+ |++|...+..+...|++|++++|+ +++.+ ..++ .|.. .+ |..+. ++.. . +..
T Consensus 172 ~g~~vlI~G~-G~vG~~a~q~ak~~G~~vi~~~~~~~~~~~~~-~~~~---~Ga~--~v--~~~~~-~~~~-~----~~~ 236 (355)
T cd08230 172 NPRRALVLGA-GPIGLLAALLLRLRGFEVYVLNRRDPPDPKAD-IVEE---LGAT--YV--NSSKT-PVAE-V----KLV 236 (355)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEecCCCCHHHHH-HHHH---cCCE--Ee--cCCcc-chhh-h----hhc
Confidence 6889999986 999999998888899999999984 33333 2333 3433 22 43332 2222 1 112
Q ss_pred CCccEEEEcCC
Q 025672 88 GKLDILVNAAA 98 (249)
Q Consensus 88 ~~id~vi~~ag 98 (249)
+.+|++|.+.|
T Consensus 237 ~~~d~vid~~g 247 (355)
T cd08230 237 GEFDLIIEATG 247 (355)
T ss_pred CCCCEEEECcC
Confidence 57999999988
|
Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai |
| >cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1 | Back alignment and domain information |
|---|
Probab=95.50 E-value=0.095 Score=44.19 Aligned_cols=79 Identities=18% Similarity=0.171 Sum_probs=48.7
Q ss_pred CCcEEEE-ecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCC
Q 025672 11 KGKVALL-TGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK 89 (249)
Q Consensus 11 ~~k~~lI-tGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 89 (249)
.+..++| +||++++|..++......|++|+.++++.++.+.+.+ .|... ++ |..+.+-.+. +.+... -..
T Consensus 142 ~~~~vlv~~~g~g~vG~~a~q~a~~~G~~vi~~~~~~~~~~~~~~----~g~~~-~i--~~~~~~~~~~-v~~~~~-~~~ 212 (324)
T cd08291 142 EGAKAVVHTAAASALGRMLVRLCKADGIKVINIVRRKEQVDLLKK----IGAEY-VL--NSSDPDFLED-LKELIA-KLN 212 (324)
T ss_pred CCCcEEEEccCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH----cCCcE-EE--ECCCccHHHH-HHHHhC-CCC
Confidence 3444555 5999999999988777889999999888776555432 23322 22 3233222222 222211 125
Q ss_pred ccEEEEcCC
Q 025672 90 LDILVNAAA 98 (249)
Q Consensus 90 id~vi~~ag 98 (249)
+|+++.+.|
T Consensus 213 ~d~vid~~g 221 (324)
T cd08291 213 ATIFFDAVG 221 (324)
T ss_pred CcEEEECCC
Confidence 999999887
|
2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin |
| >PRK14852 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=95.50 E-value=0.1 Score=50.10 Aligned_cols=36 Identities=17% Similarity=0.189 Sum_probs=30.8
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCC-eEEEEeCC
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRR 45 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~-~v~l~~r~ 45 (249)
.|+..+|+|.| .||+|..+++.|+..|. ++.++|.+
T Consensus 329 kL~~srVlVvG-lGGlGs~ia~~LAraGVG~I~L~D~D 365 (989)
T PRK14852 329 RLLRSRVAIAG-LGGVGGIHLMTLARTGIGNFNLADFD 365 (989)
T ss_pred HHhcCcEEEEC-CcHHHHHHHHHHHHcCCCeEEEEcCC
Confidence 46788999998 55999999999999998 68888763
|
|
| >PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=95.49 E-value=0.093 Score=47.21 Aligned_cols=79 Identities=15% Similarity=0.193 Sum_probs=51.6
Q ss_pred CCCCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHH
Q 025672 5 FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTI 84 (249)
Q Consensus 5 ~~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 84 (249)
|....+.+++++|.|. |..|.+.++.|.++|++|++.|++....+ .+...| +.++..+- ..+ .+
T Consensus 5 ~~~~~~~~~~v~V~G~-G~sG~aa~~~L~~~G~~v~~~D~~~~~~~----~l~~~g--~~~~~~~~-~~~----~l---- 68 (488)
T PRK03369 5 MLDPLLPGAPVLVAGA-GVTGRAVLAALTRFGARPTVCDDDPDALR----PHAERG--VATVSTSD-AVQ----QI---- 68 (488)
T ss_pred ccccccCCCeEEEEcC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHH----HHHhCC--CEEEcCcc-hHh----Hh----
Confidence 3344567899999995 57999999999999999999997654332 233333 23332211 111 11
Q ss_pred HHhCCccEEEEcCCCCCC
Q 025672 85 NHFGKLDILVNAAAGNFL 102 (249)
Q Consensus 85 ~~~~~id~vi~~ag~~~~ 102 (249)
...|+||..+|+...
T Consensus 69 ---~~~D~VV~SpGi~~~ 83 (488)
T PRK03369 69 ---ADYALVVTSPGFRPT 83 (488)
T ss_pred ---hcCCEEEECCCCCCC
Confidence 246999999997654
|
|
| >PRK13771 putative alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.47 E-value=0.11 Score=43.97 Aligned_cols=42 Identities=24% Similarity=0.413 Sum_probs=37.2
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHH
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSA 52 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~ 52 (249)
.+.+++|.|+++.+|..++..+...|++++.++++.++.+.+
T Consensus 162 ~~~~vlI~g~~g~~g~~~~~la~~~g~~vi~~~~~~~~~~~~ 203 (334)
T PRK13771 162 KGETVLVTGAGGGVGIHAIQVAKALGAKVIAVTSSESKAKIV 203 (334)
T ss_pred CCCEEEEECCCccHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence 478999999999999999999999999999998887776555
|
|
| >PLN02178 cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=95.46 E-value=0.1 Score=45.22 Aligned_cols=74 Identities=19% Similarity=0.288 Sum_probs=48.6
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCc
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 90 (249)
.+.+++|.|+ +++|..++......|++|++++++.++..+..+++ |... ++ |..+.+.+ .+..+.+
T Consensus 178 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~Vi~~~~~~~~~~~~a~~l---Ga~~-~i--~~~~~~~v-------~~~~~~~ 243 (375)
T PLN02178 178 SGKRLGVNGL-GGLGHIAVKIGKAFGLRVTVISRSSEKEREAIDRL---GADS-FL--VTTDSQKM-------KEAVGTM 243 (375)
T ss_pred CCCEEEEEcc-cHHHHHHHHHHHHcCCeEEEEeCChHHhHHHHHhC---CCcE-EE--cCcCHHHH-------HHhhCCC
Confidence 5889999886 89999999988899999998887765433333333 3322 22 33332222 2222468
Q ss_pred cEEEEcCC
Q 025672 91 DILVNAAA 98 (249)
Q Consensus 91 d~vi~~ag 98 (249)
|+++.+.|
T Consensus 244 D~vid~~G 251 (375)
T PLN02178 244 DFIIDTVS 251 (375)
T ss_pred cEEEECCC
Confidence 99999887
|
|
| >COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=95.44 E-value=0.27 Score=39.52 Aligned_cols=35 Identities=23% Similarity=0.300 Sum_probs=29.7
Q ss_pred CCCcEEEEecCCCchhHHHHHHHHHcCC-eEEEEeCC
Q 025672 10 LKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRR 45 (249)
Q Consensus 10 l~~k~~lItGa~~giG~~~a~~l~~~G~-~v~l~~r~ 45 (249)
++.-.|+|.|. ||+|.++++.|++.|. ++.++|-+
T Consensus 28 l~~~~V~VvGi-GGVGSw~veALaRsGig~itlID~D 63 (263)
T COG1179 28 LKQAHVCVVGI-GGVGSWAVEALARSGIGRITLIDMD 63 (263)
T ss_pred HhhCcEEEEec-CchhHHHHHHHHHcCCCeEEEEecc
Confidence 56677888876 5999999999999998 78888864
|
|
| >cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1 | Back alignment and domain information |
|---|
Probab=95.44 E-value=0.17 Score=43.07 Aligned_cols=75 Identities=23% Similarity=0.307 Sum_probs=49.6
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCc
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 90 (249)
++.+++|+|+++++|..++......|++|+.+.++ ++ .+..+++ +.. .+ .|..+.+..+.+. . .+.+
T Consensus 162 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~-~~-~~~~~~~---g~~-~~--~~~~~~~~~~~l~----~-~~~v 228 (350)
T cd08248 162 AGKRVLILGGSGGVGTFAIQLLKAWGAHVTTTCST-DA-IPLVKSL---GAD-DV--IDYNNEDFEEELT----E-RGKF 228 (350)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCc-ch-HHHHHHh---CCc-eE--EECCChhHHHHHH----h-cCCC
Confidence 48999999999999999999999999998887754 22 2233333 322 12 2444433333222 1 2569
Q ss_pred cEEEEcCC
Q 025672 91 DILVNAAA 98 (249)
Q Consensus 91 d~vi~~ag 98 (249)
|.++.+.|
T Consensus 229 d~vi~~~g 236 (350)
T cd08248 229 DVILDTVG 236 (350)
T ss_pred CEEEECCC
Confidence 99999887
|
Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. |
| >PRK09288 purT phosphoribosylglycinamide formyltransferase 2; Validated | Back alignment and domain information |
|---|
Probab=95.43 E-value=0.15 Score=44.33 Aligned_cols=73 Identities=18% Similarity=0.238 Sum_probs=51.3
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCc
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 90 (249)
+.|+++|+|++ .+|+.+++.+.+.|++|++++.++...... .. . .++.+|..|.+.+.+++++ ..+
T Consensus 11 ~~~~ilIiG~g-~~~~~~~~a~~~~G~~v~~~~~~~~~~~~~---~a---d--~~~~~~~~d~~~l~~~~~~-----~~i 76 (395)
T PRK09288 11 SATRVMLLGSG-ELGKEVAIEAQRLGVEVIAVDRYANAPAMQ---VA---H--RSHVIDMLDGDALRAVIER-----EKP 76 (395)
T ss_pred CCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCCCCchHH---hh---h--heEECCCCCHHHHHHHHHH-----hCC
Confidence 45689999875 689999999999999999999876532111 10 1 2456788888777666653 258
Q ss_pred cEEEEcC
Q 025672 91 DILVNAA 97 (249)
Q Consensus 91 d~vi~~a 97 (249)
|+|+...
T Consensus 77 d~vi~~~ 83 (395)
T PRK09288 77 DYIVPEI 83 (395)
T ss_pred CEEEEee
Confidence 8887643
|
|
| >PTZ00354 alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.43 E-value=0.16 Score=42.77 Aligned_cols=80 Identities=20% Similarity=0.240 Sum_probs=51.9
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCc
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 90 (249)
.+.+++|.|+++++|..++..+...|++++++.++.++.+.+. + .+.. .++ |..+.+...+.+.+... -..+
T Consensus 140 ~~~~vlI~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~---~g~~-~~~--~~~~~~~~~~~~~~~~~-~~~~ 211 (334)
T PTZ00354 140 KGQSVLIHAGASGVGTAAAQLAEKYGAATIITTSSEEKVDFCK-K---LAAI-ILI--RYPDEEGFAPKVKKLTG-EKGV 211 (334)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-H---cCCc-EEE--ecCChhHHHHHHHHHhC-CCCc
Confidence 4789999999999999999999999999888888776655542 2 2332 122 33332212222222211 1258
Q ss_pred cEEEEcCC
Q 025672 91 DILVNAAA 98 (249)
Q Consensus 91 d~vi~~ag 98 (249)
|.++++.|
T Consensus 212 d~~i~~~~ 219 (334)
T PTZ00354 212 NLVLDCVG 219 (334)
T ss_pred eEEEECCc
Confidence 99999876
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 249 | ||||
| 4fc6_A | 277 | Studies On Dcr Shed New Light On Peroxisomal Beta-O | 3e-36 | ||
| 3imf_A | 257 | 1.99 Angstrom Resolution Crystal Structure Of A Sho | 5e-31 | ||
| 1yxm_A | 303 | Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa | 4e-24 | ||
| 1vl8_A | 267 | Crystal Structure Of Gluconate 5-dehydrogenase (tm0 | 3e-23 | ||
| 1rwb_A | 261 | Cooperative Effect Of Two Surface Amino Acid Mutati | 3e-22 | ||
| 1gee_A | 261 | Crystal Structure Of Glucose Dehydrogenase Mutant Q | 5e-22 | ||
| 1gco_A | 261 | Crystal Structure Of Glucose Dehydrogenase Complexe | 5e-22 | ||
| 1g6k_A | 261 | Crystal Structure Of Glucose Dehydrogenase Mutant E | 8e-22 | ||
| 3ay6_A | 269 | Crystal Structure Of Bacillus Megaterium Glucose De | 9e-22 | ||
| 3ay7_A | 269 | Crystal Structure Of Bacillus Megaterium Glucose De | 9e-22 | ||
| 3aus_A | 269 | Crystal Structure Of Bacillus Megaterium Glucose De | 1e-21 | ||
| 2uvd_A | 246 | The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier | 6e-19 | ||
| 1w6u_A | 302 | Structure Of Human Decr Ternary Complex Length = 30 | 3e-18 | ||
| 1w73_A | 302 | Binary Structure Of Human Decr Solved By Semet Sad. | 1e-17 | ||
| 1doh_A | 283 | Structure Of Trihydroxynaphthalene Reductase In Com | 1e-17 | ||
| 1ybv_A | 283 | Structure Of Trihydroxynaphthalene Reductase In Com | 1e-17 | ||
| 3cxr_A | 291 | Crystal Structure Of Gluconate 5-Dehydrogase From S | 3e-16 | ||
| 1ipe_A | 259 | Tropinone Reductase-Ii Complexed With Nadph Length | 6e-16 | ||
| 2ae2_A | 260 | Tropinone Reductase-Ii Complexed With Nadp+ And Pse | 6e-16 | ||
| 3ijr_A | 291 | 2.05 Angstrom Resolution Crystal Structure Of A Sho | 1e-15 | ||
| 3i3o_A | 291 | 2.06 Angstrom Resolution Crystal Structure Of A Sho | 1e-15 | ||
| 3gaf_A | 256 | 2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid De | 2e-15 | ||
| 3is3_A | 270 | Crystal Structure Of 17beta-Hydroxysteroid Dehydrog | 3e-15 | ||
| 1ahi_A | 255 | 7 Alpha-Hydroxysteroid Dehydrogenase Complexed With | 3e-15 | ||
| 3itd_A | 270 | Crystal Structure Of An Inactive 17beta-Hydroxyster | 4e-15 | ||
| 4fgs_A | 273 | Crystal Structure Of A Probable Dehydrogenase Prote | 1e-14 | ||
| 3v8b_A | 283 | Crystal Structure Of A 3-Ketoacyl-Acp Reductase Fro | 2e-14 | ||
| 2c07_A | 285 | Oxoacyl-Acp Reductase Of Plasmodium Falciparum Leng | 2e-14 | ||
| 1yde_A | 270 | Crystal Structure Of Human Retinal Short-Chain Dehy | 4e-14 | ||
| 3n74_A | 261 | Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote | 7e-14 | ||
| 4dqx_A | 277 | Crystal Structure Of A Short Chain Dehydrogenase Fr | 9e-14 | ||
| 2hq1_A | 247 | Crystal Structure Of Orf 1438 A Putative GlucoseRIB | 1e-13 | ||
| 1zem_A | 262 | Crystal Structure Of Nad+-Bound Xylitol Dehydrogena | 1e-13 | ||
| 3o4r_A | 261 | Crystal Structure Of Human DehydrogenaseREDUCTASE ( | 2e-13 | ||
| 3ak4_A | 263 | Crystal Structure Of Nadh-Dependent Quinuclidinone | 3e-13 | ||
| 3tzq_B | 271 | Crystal Structure Of A Short-Chain Type Dehydrogena | 4e-13 | ||
| 2ew8_A | 249 | Crystal Structure Of The (s)-specific 1-phenylethan | 8e-13 | ||
| 1iy8_A | 267 | Crystal Structure Of Levodione Reductase Length = 2 | 9e-13 | ||
| 2pnf_A | 248 | Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl- | 1e-12 | ||
| 1spx_A | 278 | Crystal Structure Of Glucose Dehydrogenase Of Caeno | 1e-12 | ||
| 4fn4_A | 254 | Short-chain Nad(h)-dependent Dehydrogenase/reductas | 3e-12 | ||
| 1ae1_A | 273 | Tropinone Reductase-I Complex With Nadp Length = 27 | 4e-12 | ||
| 4afn_A | 269 | Crystal Structure Of 3-ketoacyl-(acyl-carrier-prote | 5e-12 | ||
| 3o38_A | 266 | Crystal Structure Of A Short Chain Dehydrogenase Fr | 8e-12 | ||
| 3qiv_A | 253 | Crystal Structure Of A Putative Short-Chain Dehydro | 1e-11 | ||
| 1hxh_A | 253 | Comamonas Testosteroni 3beta17BETA HYDROXYSTEROID D | 1e-11 | ||
| 3ftp_A | 270 | Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote | 1e-11 | ||
| 3sj7_A | 252 | Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) F | 1e-11 | ||
| 3icc_A | 255 | Crystal Structure Of A Putative 3-Oxoacyl-(Acyl Car | 2e-11 | ||
| 2d1y_A | 256 | Crystal Structure Of Tt0321 From Thermus Thermophil | 2e-11 | ||
| 3osu_A | 246 | Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Pro | 4e-11 | ||
| 2rh4_A | 277 | Actinorhodin Ketoreductase, Actkr, With Nadph And I | 4e-11 | ||
| 4dc1_A | 281 | Crystal Structure Of Y202f Actinorhodin Polyketide | 5e-11 | ||
| 1x7g_A | 261 | Actinorhodin Polyketide Ketoreductase, Act Kr, With | 5e-11 | ||
| 1w4z_A | 281 | Structure Of Actinorhodin Polyketide (Actiii) Reduc | 5e-11 | ||
| 4dc0_A | 281 | Crystal Structure Of F189w Actinorhodin Polyketide | 5e-11 | ||
| 3r3s_A | 294 | Structure Of The Ygha Oxidoreductase From Salmonell | 6e-11 | ||
| 3gdf_A | 267 | Crystal Structure Of The Nadp-Dependent Mannitol De | 6e-11 | ||
| 4dbz_A | 281 | Crystal Structure Of V151l Actinorhodin Polyketide | 6e-11 | ||
| 1uls_A | 245 | Crystal Structure Of Tt0140 From Thermus Thermophil | 6e-11 | ||
| 2rhr_B | 277 | P94l Actinorhodin Ketordeuctase Mutant, With Nadph | 7e-11 | ||
| 3csd_B | 281 | Actinorhodin Polyketide Ketoreductase Mutant P94l B | 8e-11 | ||
| 1ja9_A | 274 | Crystal Structure Of 1,3,6,8-Tetrahydroxynaphthalen | 8e-11 | ||
| 2zat_A | 260 | Crystal Structure Of A Mammalian Reductase Length = | 2e-10 | ||
| 3pk0_A | 262 | Crystal Structure Of Short-Chain DehydrogenaseREDUC | 2e-10 | ||
| 1xkq_A | 280 | Crystal Structure Of Short-Chain DehydrogenaseREDUC | 2e-10 | ||
| 4g81_D | 255 | Crystal Structure Of A Hexonate Dehydrogenase Ortho | 4e-10 | ||
| 1xhl_A | 297 | Crystal Structure Of Putative Tropinone Reductase-I | 6e-10 | ||
| 1nxq_A | 251 | Crystal Structure Of R-Alcohol Dehydrogenase (Radh) | 6e-10 | ||
| 2y93_A | 281 | Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2 | 7e-10 | ||
| 3v2g_A | 271 | Crystal Structure Of A DehydrogenaseREDUCTASE FROM | 7e-10 | ||
| 1geg_A | 256 | Cryatal Structure Analysis Of Meso-2,3-Butanediol D | 1e-09 | ||
| 3awd_A | 260 | Crystal Structure Of Gox2181 Length = 260 | 1e-09 | ||
| 3uf0_A | 273 | Crystal Structure Of A Putative Nad(P) Dependent Gl | 1e-09 | ||
| 3e03_A | 274 | Crystal Structure Of A Putative Dehydrogenase From | 1e-09 | ||
| 4dyv_A | 272 | Crystal Structure Of A Short-Chain DehydrogenaseRED | 1e-09 | ||
| 1xq1_A | 266 | X-Ray Structure Of Putative Tropinone Reducatse Fro | 2e-09 | ||
| 3r1i_A | 276 | Crystal Structure Of A Short-Chain Type Dehydrogena | 2e-09 | ||
| 4iqg_C | 271 | Crystal Structure Of Bpro0239 Oxidoreductase From P | 2e-09 | ||
| 4b79_A | 242 | The Aeropath Project And Pseudomonas Aeruginosa Hig | 3e-09 | ||
| 1zjy_A | 251 | Structure Of R-Specific Alcohol Dehydrogenase (Muta | 3e-09 | ||
| 4e3z_A | 272 | Crystal Structure Of A Oxidoreductase From Rhizobiu | 4e-09 | ||
| 3f9i_A | 249 | Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote | 4e-09 | ||
| 3tsc_A | 277 | Crystal Structure Of Short Chain Dehydrogenase Map_ | 5e-09 | ||
| 3ctm_A | 279 | Crystal Structure Of A Carbonyl Reductase From Cand | 5e-09 | ||
| 3u5t_A | 267 | The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Pr | 7e-09 | ||
| 3oic_A | 258 | Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl | 7e-09 | ||
| 2ph3_A | 245 | Crystal Structure Of 3-oxoacyl-[acyl Carrier Protei | 8e-09 | ||
| 4ibo_A | 271 | Crystal Structure Of A Putative Gluconate Dehydroge | 9e-09 | ||
| 1x1e_A | 239 | Crystal Structure Of Tt0495 Protein From Thermus Th | 1e-08 | ||
| 4iin_A | 271 | Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Car | 1e-08 | ||
| 2ztm_A | 260 | T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase L | 1e-08 | ||
| 3kvo_A | 346 | Crystal Structure Of The Catalytic Domain Of Human | 1e-08 | ||
| 3g1t_A | 258 | Crystal Structure Of Short Chain Dehydrogenase From | 2e-08 | ||
| 3tox_A | 280 | Crystal Structure Of A Short Chain Dehydrogenase In | 2e-08 | ||
| 2pd6_A | 264 | Structure Of Human Hydroxysteroid Dehydrogenase Typ | 2e-08 | ||
| 1wmb_A | 260 | Crystal Structure Of Nad Dependent D-3-Hydroxybutyl | 2e-08 | ||
| 3tzk_A | 251 | Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote | 2e-08 | ||
| 2ztu_A | 260 | T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase C | 2e-08 | ||
| 3tzh_A | 251 | Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote | 2e-08 | ||
| 3tzc_A | 251 | Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote | 4e-08 | ||
| 3rsh_A | 251 | Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reduc | 4e-08 | ||
| 3tjr_A | 301 | Crystal Structure Of A Rv0851c Ortholog Short Chain | 5e-08 | ||
| 2cfc_A | 250 | Structural Basis For Stereo Selectivity In The (R)- | 6e-08 | ||
| 3u09_A | 251 | Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote | 7e-08 | ||
| 4e6p_A | 259 | Crystal Structure Of A Probable Sorbitol Dehydrogen | 7e-08 | ||
| 3un1_A | 260 | Crystal Structure Of An Oxidoreductase From Sinorhi | 7e-08 | ||
| 3rih_A | 293 | Crystal Structure Of A Putative Short Chain Dehydro | 8e-08 | ||
| 4dml_A | 269 | 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Syn | 8e-08 | ||
| 2gdz_A | 267 | Crystal Structure Of 15-Hydroxyprostaglandin Dehydr | 8e-08 | ||
| 2et6_A | 604 | (3r)-Hydroxyacyl-Coa Dehydrogenase Domain Of Candid | 9e-08 | ||
| 3ai3_A | 263 | The Crystal Structure Of L-Sorbose Reductase From G | 1e-07 | ||
| 1k2w_A | 256 | Crystal Structure Of Sorbitol Dehydrogenase From R. | 1e-07 | ||
| 2ehd_A | 234 | Crystal Structure Analysis Of Oxidoreductase Length | 1e-07 | ||
| 3nug_A | 247 | Crystal Structure Of Wild Type Tetrameric Pyridoxal | 1e-07 | ||
| 2yz7_A | 260 | X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase F | 1e-07 | ||
| 2jap_A | 247 | Clavulanic Acid Dehydrogenase: Structural And Bioch | 1e-07 | ||
| 1edo_A | 244 | The X-Ray Structure Of Beta-Keto Acyl Carrier Prote | 2e-07 | ||
| 3ai1_A | 263 | The Crystal Structure Of L-Sorbose Reductase From G | 2e-07 | ||
| 2b4q_A | 276 | Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex | 3e-07 | ||
| 3v2h_A | 281 | The Crystal Structure Of D-Beta-Hydroxybutyrate Deh | 3e-07 | ||
| 3ndr_A | 247 | Crystal Structure Of Tetrameric Pyridoxal 4-Dehydro | 4e-07 | ||
| 2qq5_A | 260 | Crystal Structure Of Human Sdr Family Member 1 Leng | 5e-07 | ||
| 1nff_A | 260 | Crystal Structure Of Rv2002 Gene Product From Mycob | 5e-07 | ||
| 1h5q_A | 265 | Mannitol Dehydrogenase From Agaricus Bisporus Lengt | 5e-07 | ||
| 2pd3_A | 275 | Crystal Structure Of The Helicobacter Pylori Enoyl- | 6e-07 | ||
| 3f5s_A | 255 | Crystal Structure Of Putatitve Short Chain Dehydrog | 7e-07 | ||
| 1q7c_A | 244 | The Structure Of Betaketoacyl-[acp] Reductase Y151f | 7e-07 | ||
| 1i01_A | 244 | Crystal Structure Of Beta-Ketoacyl [acyl Carrier Pr | 1e-06 | ||
| 3sc4_A | 285 | Crystal Structure Of A Short Chain Dehydrogenase (A | 1e-06 | ||
| 3iah_A | 256 | Crystal Structure Of Short Chain Dehydrogenase (yci | 1e-06 | ||
| 3ioy_A | 319 | Structure Of Putative Short-Chain Dehydrogenase (Sa | 2e-06 | ||
| 3f5q_A | 262 | Crystal Structure Of Putative Short Chain Dehydroge | 2e-06 | ||
| 3op4_A | 248 | Crystal Structure Of Putative 3-Ketoacyl-(Acyl-Carr | 2e-06 | ||
| 3i4f_A | 264 | Structure Of Putative 3-oxoacyl-reductase From Baci | 2e-06 | ||
| 2jah_A | 247 | Biochemical And Structural Analysis Of The Clavulan | 2e-06 | ||
| 2hsd_A | 253 | The Refined Three-Dimensional Structure Of 3alpha,2 | 2e-06 | ||
| 1uzl_A | 247 | Maba From Mycobacterium Tuberculosis Length = 247 | 3e-06 | ||
| 1pr9_A | 244 | Human L-Xylulose Reductase Holoenzyme Length = 244 | 3e-06 | ||
| 2wdz_A | 254 | Crystal Structure Of The Short Chain Dehydrogenase | 4e-06 | ||
| 3d3w_A | 244 | Structure Of L-Xylulose Reductase With Bound Coenzy | 4e-06 | ||
| 3lyl_A | 247 | Structure Of 3-Oxoacyl-Acylcarrier Protein Reductas | 4e-06 | ||
| 1nfr_A | 260 | Rv2002 Gene Product From Mycobacterium Tuberculosis | 4e-06 | ||
| 3enn_A | 249 | 2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGEN | 4e-06 | ||
| 3f1l_A | 252 | The 0.95 A Structure Of An Oxidoreductase, Ycik Fro | 4e-06 | ||
| 2cf2_E | 226 | Architecture Of Mammalian Fatty Acid Synthase Lengt | 5e-06 | ||
| 3o26_A | 311 | The Structure Of Salutaridine Reductase From Papave | 5e-06 | ||
| 3emk_A | 246 | 2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGEN | 5e-06 | ||
| 1xse_A | 295 | Crystal Structure Of Guinea Pig 11beta-Hydroxystero | 5e-06 | ||
| 3qlj_A | 322 | Crystal Structure Of A Short Chain Dehydrogenase Fr | 6e-06 | ||
| 3d3w_B | 245 | Structure Of L-Xylulose Reductase With Bound Coenzy | 6e-06 | ||
| 3t7c_A | 299 | Crystal Structure Of Carveol Dehydrogenase From Myc | 6e-06 | ||
| 3oec_A | 317 | Crystal Structure Of Carveol Dehydrogenase From Myc | 6e-06 | ||
| 3vtz_A | 269 | Structure Of Thermoplasma Volcanium Aldohexose Dehy | 7e-06 | ||
| 3svt_A | 281 | Structure Of A Short-Chain Type DehydrogenaseREDUCT | 8e-06 | ||
| 1bdb_A | 277 | Cis-Biphenyl-2,3-Dihydrodiol-2,3-Dehydrogenase From | 9e-06 | ||
| 2ntn_A | 267 | Crystal Structure Of Maba-c60v/g139a/s144l Length = | 9e-06 | ||
| 2z1n_A | 260 | Crystal Structure Of Ape0912 From Aeropyrum Pernix | 1e-05 | ||
| 3dwf_A | 276 | Crystal Structure Of The Guinea Pig 11beta-Hydroxys | 1e-05 | ||
| 3g49_A | 277 | N-(Pyridin-2-Yl) Arylsulfonamide Inhibitors Of 11b- | 1e-05 | ||
| 1uzm_A | 247 | Maba From Mycobacterium Tuberculosis Length = 247 | 1e-05 | ||
| 3tfo_A | 264 | Crystal Structure Of A Putative 3-Oxoacyl-(Acyl-Car | 1e-05 | ||
| 1hdc_A | 254 | Mechanism Of Inhibition Of 3alpha,20beta-Hydroxyste | 1e-05 | ||
| 3lz6_A | 263 | Guinea Pig 11beta Hydroxysteroid Dehydrogenase With | 1e-05 | ||
| 1cyd_A | 244 | Carbonyl Reductase Complexed With Nadph And 2-Propa | 1e-05 | ||
| 3pxx_A | 287 | Crystal Structure Of Carveol Dehydrogenase From Myc | 1e-05 | ||
| 3uve_A | 286 | Crystal Structure Of Carveol Dehydrogenase ((+)-Tra | 2e-05 | ||
| 4hp8_A | 247 | Crystal Structure Of A Putative 2-Deoxy-D-Gluconate | 2e-05 | ||
| 2bgk_A | 278 | X-Ray Structure Of Apo-Secoisolariciresinol Dehydro | 2e-05 | ||
| 3lf1_A | 265 | Apo Structure Of The Short Chain Oxidoreductase Q9h | 2e-05 | ||
| 3pgx_A | 280 | Crystal Structure Of A Putative Carveol Dehydrogena | 2e-05 | ||
| 3f4b_A | 323 | Crystal Structure Of Plasmodium Berghei Enoyl-Acyl- | 3e-05 | ||
| 1zbq_A | 327 | Crystal Structure Of Human 17-beta-hydroxysteroid D | 4e-05 | ||
| 3gk3_A | 269 | Crystal Structure Of Acetoacetyl-Coa Reductase From | 4e-05 | ||
| 3afm_A | 258 | Crystal Structure Of Aldose Reductase A1-R Responsi | 5e-05 | ||
| 3oml_A | 613 | Structure Of Full-Length Peroxisomal Multifunctiona | 7e-05 | ||
| 3edm_A | 259 | Crystal Structure Of A Short Chain Dehydrogenase Fr | 7e-05 | ||
| 3tl3_A | 257 | Structure Of A Short-Chain Type DehydrogenaseREDUCT | 8e-05 | ||
| 3i1j_A | 247 | Structure Of A Putative Short Chain Dehydrogenase F | 8e-05 | ||
| 4bb6_A | 292 | Free-Wilson And Structural Approaches To Co-Optimis | 1e-04 | ||
| 2q2q_A | 255 | Structure Of D-3-Hydroxybutyrate Dehydrogenase From | 1e-04 | ||
| 3grp_A | 266 | 2.1 Angstrom Crystal Structure Of 3-Ketoacyl-(Acyl- | 1e-04 | ||
| 3sju_A | 279 | Hedamycin Polyketide Ketoreductase Bound To Nadph L | 1e-04 | ||
| 2ptg_A | 319 | Crystal Structure Of Eimeria Tenella Enoyl Reductas | 1e-04 | ||
| 2o2s_A | 315 | The Structure Of T. Gondii Enoyl Acyl Carrier Prote | 1e-04 | ||
| 4eso_A | 255 | Crystal Structure Of A Putative Oxidoreductase Prot | 1e-04 | ||
| 3vc7_A | 254 | Crystal Structure Of A Putative Oxidoreductase From | 1e-04 | ||
| 3e9q_A | 273 | Crystal Structure Of The Short Chain Dehydrogenase | 1e-04 | ||
| 3d5q_A | 272 | Crystal Structure Of 11b-Hsd1 In Complex With Triaz | 1e-04 | ||
| 3pdj_A | 273 | Crystal Structure Of Human 11-Beta-Hydroxysteroid D | 1e-04 | ||
| 4bb5_A | 292 | Free-Wilson And Structural Approaches To Co-Optimis | 1e-04 | ||
| 1xu7_A | 286 | Crystal Structure Of The Interface Open Conformatio | 1e-04 | ||
| 4hfr_A | 272 | Human 11beta-Hydroxysteroid Dehydrogenase Type 1 In | 1e-04 | ||
| 2dtd_A | 264 | Structure Of Thermoplasma Acidophilum Aldohexose De | 1e-04 | ||
| 2ilt_A | 275 | Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) W | 1e-04 | ||
| 2irw_A | 264 | Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) W | 1e-04 | ||
| 2zk7_A | 257 | Structure Of A C-Terminal Deletion Mutant Of Thermo | 2e-04 | ||
| 2o50_A | 315 | The Crystal Structure Of Toxoplasma Gondii Enoyl Ac | 2e-04 | ||
| 2rbe_A | 275 | The Discovery Of 2-Anilinothiazolones As 11beta-Hsd | 2e-04 | ||
| 3ch6_A | 286 | Crystal Structure Of 11beta-Hsd1 Double Mutant (L26 | 2e-04 | ||
| 2bel_A | 283 | Structure Of Human 11-Beta-Hydroxysteroid Dehydroge | 2e-04 | ||
| 2o2y_A | 349 | The Crystal Structure Of P. Falciparum Enoyl Acyl C | 2e-04 | ||
| 3am3_A | 329 | A372m Mutant Of Enoyl-Acp Reductase From Plasmodium | 2e-04 | ||
| 1vrw_A | 336 | Crystal Structure Analysis Of Plasmodium Falciparum | 2e-04 | ||
| 1uh5_A | 329 | Crystal Structure Of Enoyl-Acp Reductase With Tricl | 2e-04 | ||
| 2foi_A | 269 | Synthesis, Biological Activity, And X-Ray Crystal S | 2e-04 | ||
| 2ol4_A | 338 | Crystal Structure Of Plasmodium Falciparum Enoyl Ac | 2e-04 | ||
| 2nm0_A | 253 | Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl | 3e-04 | ||
| 1nhg_A | 229 | Crystal Structure Analysis Of Plasmodium Falciparum | 3e-04 | ||
| 3gmd_A | 264 | Structure-Based Design Of 7-Azaindole-Pyrrolidines | 3e-04 | ||
| 3f1k_A | 252 | Crystal Structure Of Ycik From E. Coli, An Oxidored | 4e-04 | ||
| 3u9l_A | 324 | The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Pr | 4e-04 | ||
| 1y5m_A | 276 | The Crystal Structure Of Murine 11b-Hydroxysteroid | 4e-04 | ||
| 2ag5_A | 246 | Crystal Structure Of Human Dhrs6 Length = 246 | 5e-04 | ||
| 3sx2_A | 278 | Crystal Structure Of A Putative 3-Ketoacyl-(Acyl-Ca | 6e-04 | ||
| 3uwr_A | 286 | Crystal Structure Of Carveol Dehydrogenase From Myc | 6e-04 | ||
| 1iol_A | 327 | Estrogenic 17-beta Hydroxysteroid Dehydrogenase Com | 7e-04 | ||
| 3t4x_A | 267 | Short Chain DehydrogenaseREDUCTASE FAMILY OXIDOREDU | 7e-04 | ||
| 3s55_A | 281 | Crystal Structure Of A Putative Short-Chain Dehydro | 8e-04 | ||
| 1n5d_A | 288 | Crystal Structure Of Porcine Testicular Carbonyl Re | 8e-04 |
| >pdb|4FC6|A Chain A, Studies On Dcr Shed New Light On Peroxisomal Beta-Oxidation: Crystal Structure Of The Ternary Complex Of Pdcr Length = 277 | Back alignment and structure |
|
| >pdb|3IMF|A Chain A, 1.99 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' Length = 257 | Back alignment and structure |
|
| >pdb|1YXM|A Chain A, Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa Reductase Length = 303 | Back alignment and structure |
|
| >pdb|1VL8|A Chain A, Crystal Structure Of Gluconate 5-dehydrogenase (tm0441) From Thermotoga Maritima At 2.07 A Resolution Length = 267 | Back alignment and structure |
|
| >pdb|1RWB|A Chain A, Cooperative Effect Of Two Surface Amino Acid Mutations (Q252l And E170k) Of Glucose Dehydrogenase From Bacillus Megaterium Iwg3 For The Stabilization Of Oligomeric State Length = 261 | Back alignment and structure |
|
| >pdb|1GEE|A Chain A, Crystal Structure Of Glucose Dehydrogenase Mutant Q252l Complexed With Nad+ Length = 261 | Back alignment and structure |
|
| >pdb|1GCO|A Chain A, Crystal Structure Of Glucose Dehydrogenase Complexed With Nad+ Length = 261 | Back alignment and structure |
|
| >pdb|1G6K|A Chain A, Crystal Structure Of Glucose Dehydrogenase Mutant E96a Complexed With Nad+ Length = 261 | Back alignment and structure |
|
| >pdb|3AY6|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 A258f Mutant In Complex With Nadh And D-Glucose Length = 269 | Back alignment and structure |
|
| >pdb|3AY7|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 G259a Mutant Length = 269 | Back alignment and structure |
|
| >pdb|3AUS|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 In Ligand-Free Form Length = 269 | Back alignment and structure |
|
| >pdb|2UVD|A Chain A, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier Protein) Reductase From Bacillus Anthracis (Ba3989) Length = 246 | Back alignment and structure |
|
| >pdb|1W6U|A Chain A, Structure Of Human Decr Ternary Complex Length = 302 | Back alignment and structure |
|
| >pdb|1W73|A Chain A, Binary Structure Of Human Decr Solved By Semet Sad. Length = 302 | Back alignment and structure |
|
| >pdb|1DOH|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex With Nadph And 4-nitro-inden-1-one Length = 283 | Back alignment and structure |
|
| >pdb|1YBV|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex With Nadph And An Active Site Inhibitor Length = 283 | Back alignment and structure |
|
| >pdb|3CXR|A Chain A, Crystal Structure Of Gluconate 5-Dehydrogase From Streptococcus Suis Type 2 Length = 291 | Back alignment and structure |
|
| >pdb|1IPE|A Chain A, Tropinone Reductase-Ii Complexed With Nadph Length = 259 | Back alignment and structure |
|
| >pdb|2AE2|A Chain A, Tropinone Reductase-Ii Complexed With Nadp+ And Pseudotropine Length = 260 | Back alignment and structure |
|
| >pdb|3IJR|A Chain A, 2.05 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' In Complex With Nad+ Length = 291 | Back alignment and structure |
|
| >pdb|3I3O|A Chain A, 2.06 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' In Complex With Nad-acetone Length = 291 | Back alignment and structure |
|
| >pdb|3GAF|A Chain A, 2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid Dehydrogenase From Brucella Melitensis Length = 256 | Back alignment and structure |
|
| >pdb|3IS3|A Chain A, Crystal Structure Of 17beta-Hydroxysteroid Dehydrogenase (Apo Form) From Fungus Cochliobolus Lunatus Length = 270 | Back alignment and structure |
|
| >pdb|1AHI|A Chain A, 7 Alpha-Hydroxysteroid Dehydrogenase Complexed With Nadh And 7-Oxo Glycochenodeoxycholic Acid Length = 255 | Back alignment and structure |
|
| >pdb|3ITD|A Chain A, Crystal Structure Of An Inactive 17beta-Hydroxysteroid Dehydrogenase (Y167f Mutated Form) From Fungus Cochliobolus Lunatus Length = 270 | Back alignment and structure |
|
| >pdb|4FGS|A Chain A, Crystal Structure Of A Probable Dehydrogenase Protein Length = 273 | Back alignment and structure |
|
| >pdb|3V8B|A Chain A, Crystal Structure Of A 3-Ketoacyl-Acp Reductase From Sinorhizobium Meliloti 1021 Length = 283 | Back alignment and structure |
|
| >pdb|2C07|A Chain A, Oxoacyl-Acp Reductase Of Plasmodium Falciparum Length = 285 | Back alignment and structure |
|
| >pdb|1YDE|A Chain A, Crystal Structure Of Human Retinal Short-Chain DehydrogenaseREDUCTASE 3 Length = 270 | Back alignment and structure |
|
| >pdb|3N74|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reduc Brucella Melitensis Length = 261 | Back alignment and structure |
|
| >pdb|4DQX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Rhizobium Etli Cfn 42 Length = 277 | Back alignment and structure |
|
| >pdb|2HQ1|A Chain A, Crystal Structure Of Orf 1438 A Putative GlucoseRIBITOL Dehydrogenase From Clostridium Thermocellum Length = 247 | Back alignment and structure |
|
| >pdb|1ZEM|A Chain A, Crystal Structure Of Nad+-Bound Xylitol Dehydrogenase Length = 262 | Back alignment and structure |
|
| >pdb|3O4R|A Chain A, Crystal Structure Of Human DehydrogenaseREDUCTASE (SDR FAMILY) MEMBER 4 (Dhrs4) Length = 261 | Back alignment and structure |
|
| >pdb|3AK4|A Chain A, Crystal Structure Of Nadh-Dependent Quinuclidinone Reductase From Agrobacterium Tumefaciens Length = 263 | Back alignment and structure |
|
| >pdb|3TZQ|B Chain B, Crystal Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Marinum Length = 271 | Back alignment and structure |
|
| >pdb|2EW8|A Chain A, Crystal Structure Of The (s)-specific 1-phenylethanol Dehydrogenase Of The Denitrifying Bacterium Strain Ebn1 Length = 249 | Back alignment and structure |
|
| >pdb|1IY8|A Chain A, Crystal Structure Of Levodione Reductase Length = 267 | Back alignment and structure |
|
| >pdb|2PNF|A Chain A, Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-carrier Protein) Reductase Length = 248 | Back alignment and structure |
|
| >pdb|1SPX|A Chain A, Crystal Structure Of Glucose Dehydrogenase Of Caenorhabditis Elegans In The Apo-Form Length = 278 | Back alignment and structure |
|
| >pdb|4FN4|A Chain A, Short-chain Nad(h)-dependent Dehydrogenase/reductase From Sulfolobus Acidocaldarius Length = 254 | Back alignment and structure |
|
| >pdb|1AE1|A Chain A, Tropinone Reductase-I Complex With Nadp Length = 273 | Back alignment and structure |
|
| >pdb|4AFN|A Chain A, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein) Reductase (fabg) From Pseudomonas Aeruginosa At 2.3a Resolution Length = 269 | Back alignment and structure |
|
| >pdb|3O38|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Mycobacterium Smegmatis Length = 266 | Back alignment and structure |
|
| >pdb|3QIV|A Chain A, Crystal Structure Of A Putative Short-Chain Dehydrogenase Or 3- Oxoacyl-[acyl-Carrier-Protein] Reductase From Mycobacterium Paratuberculosis Atcc Baa-968 K-10 Length = 253 | Back alignment and structure |
|
| >pdb|1HXH|A Chain A, Comamonas Testosteroni 3beta17BETA HYDROXYSTEROID Dehydrogenase Length = 253 | Back alignment and structure |
|
| >pdb|3FTP|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Burkholderia Pseudomallei At 2.05 A Resolution Length = 270 | Back alignment and structure |
|
| >pdb|3SJ7|A Chain A, Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) From Staphylococcus Aureus Complex With Nadph Length = 252 | Back alignment and structure |
|
| >pdb|3ICC|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl Carrier Protein) Reductase From Bacillus Anthracis At 1.87 A Resolution Length = 255 | Back alignment and structure |
|
| >pdb|2D1Y|A Chain A, Crystal Structure Of Tt0321 From Thermus Thermophilus Hb8 Length = 256 | Back alignment and structure |
|
| >pdb|3OSU|A Chain A, Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Protein Reductase, Fabg, From Staphylococcus Aureus Length = 246 | Back alignment and structure |
|
| >pdb|2RH4|A Chain A, Actinorhodin Ketoreductase, Actkr, With Nadph And Inhibitor Emodin Length = 277 | Back alignment and structure |
|
| >pdb|4DC1|A Chain A, Crystal Structure Of Y202f Actinorhodin Polyketide Ketoreductase With Nadph Length = 281 | Back alignment and structure |
|
| >pdb|1X7G|A Chain A, Actinorhodin Polyketide Ketoreductase, Act Kr, With Nadp Bound Length = 261 | Back alignment and structure |
|
| >pdb|1W4Z|A Chain A, Structure Of Actinorhodin Polyketide (Actiii) Reductase Length = 281 | Back alignment and structure |
|
| >pdb|4DC0|A Chain A, Crystal Structure Of F189w Actinorhodin Polyketide Ketoreductase With Nadph Length = 281 | Back alignment and structure |
|
| >pdb|3R3S|A Chain A, Structure Of The Ygha Oxidoreductase From Salmonella Enterica Length = 294 | Back alignment and structure |
|
| >pdb|3GDF|A Chain A, Crystal Structure Of The Nadp-Dependent Mannitol Dehydrogenase From Cladosporium Herbarum. Length = 267 | Back alignment and structure |
|
| >pdb|4DBZ|A Chain A, Crystal Structure Of V151l Actinorhodin Polyketide Ketoreductase With Nadph Length = 281 | Back alignment and structure |
|
| >pdb|1ULS|A Chain A, Crystal Structure Of Tt0140 From Thermus Thermophilus Hb8 Length = 245 | Back alignment and structure |
|
| >pdb|2RHR|B Chain B, P94l Actinorhodin Ketordeuctase Mutant, With Nadph And Inhibitor Emodin Length = 277 | Back alignment and structure |
|
| >pdb|3CSD|B Chain B, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To Nadph And The Inhibitor Emodin Length = 281 | Back alignment and structure |
|
| >pdb|1JA9|A Chain A, Crystal Structure Of 1,3,6,8-Tetrahydroxynaphthalene Reductase In Complex With Nadph And Pyroquilon Length = 274 | Back alignment and structure |
|
| >pdb|2ZAT|A Chain A, Crystal Structure Of A Mammalian Reductase Length = 260 | Back alignment and structure |
|
| >pdb|3PK0|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE SDR FROM Mycobacterium Smegmatis Length = 262 | Back alignment and structure |
|
| >pdb|1XKQ|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE OF Unknown Function From Caenorhabditis Elegans With Cofactor Length = 280 | Back alignment and structure |
|
| >pdb|4G81|D Chain D, Crystal Structure Of A Hexonate Dehydrogenase Ortholog (Target Efi- 506402 From Salmonella Enterica, Unliganded Structure Length = 255 | Back alignment and structure |
|
| >pdb|1XHL|A Chain A, Crystal Structure Of Putative Tropinone Reductase-Ii From Caenorhabditis Elegans With Cofactor And Substrate Length = 297 | Back alignment and structure |
|
| >pdb|1NXQ|A Chain A, Crystal Structure Of R-Alcohol Dehydrogenase (Radh) (Apoenyzme) From Lactobacillus Brevis Length = 251 | Back alignment and structure |
|
| >pdb|2Y93|A Chain A, Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2,3- Dehydrogenase (Bphb)from Pandoraea Pnomenusa Strain B-356. Length = 281 | Back alignment and structure |
|
| >pdb|3V2G|A Chain A, Crystal Structure Of A DehydrogenaseREDUCTASE FROM SINORHIZOBIUM Meliloti 1021 Length = 271 | Back alignment and structure |
|
| >pdb|1GEG|A Chain A, Cryatal Structure Analysis Of Meso-2,3-Butanediol Dehydrogenase Length = 256 | Back alignment and structure |
|
| >pdb|3AWD|A Chain A, Crystal Structure Of Gox2181 Length = 260 | Back alignment and structure |
|
| >pdb|3UF0|A Chain A, Crystal Structure Of A Putative Nad(P) Dependent Gluconate 5- Dehydrogenase From Beutenbergia Cavernae(Efi Target Efi-502044) With Bound Nadp (Low Occupancy) Length = 273 | Back alignment and structure |
|
| >pdb|3E03|A Chain A, Crystal Structure Of A Putative Dehydrogenase From Xanthomonas Campestris Length = 274 | Back alignment and structure |
|
| >pdb|4DYV|A Chain A, Crystal Structure Of A Short-Chain DehydrogenaseREDUCTASE SDR FROM Xanthobacter Autotrophicus Py2 Length = 272 | Back alignment and structure |
|
| >pdb|1XQ1|A Chain A, X-Ray Structure Of Putative Tropinone Reducatse From Arabidopsis Thaliana Gene At1g07440 Length = 266 | Back alignment and structure |
|
| >pdb|3R1I|A Chain A, Crystal Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Marinum Length = 276 | Back alignment and structure |
|
| >pdb|4IQG|C Chain C, Crystal Structure Of Bpro0239 Oxidoreductase From Polaromonas Sp. Js666 In Nadp Bound Form Length = 271 | Back alignment and structure |
|
| >pdb|4B79|A Chain A, The Aeropath Project And Pseudomonas Aeruginosa High-throughput Crystallographic Studies For Assessment Of Potential Targets In Early Stage Drug Discovery. Length = 242 | Back alignment and structure |
|
| >pdb|1ZJY|A Chain A, Structure Of R-Specific Alcohol Dehydrogenase (Mutant G37d) From Lactobacillus Brevis In Complex With Phenylethanol And Nadh Length = 251 | Back alignment and structure |
|
| >pdb|4E3Z|A Chain A, Crystal Structure Of A Oxidoreductase From Rhizobium Etli Cfn 42 Length = 272 | Back alignment and structure |
|
| >pdb|3F9I|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase Rickettsia Prowazekii Length = 249 | Back alignment and structure |
|
| >pdb|3TSC|A Chain A, Crystal Structure Of Short Chain Dehydrogenase Map_2410 From Mycobacterium Paratuberculosis Bound To Nad Length = 277 | Back alignment and structure |
|
| >pdb|3CTM|A Chain A, Crystal Structure Of A Carbonyl Reductase From Candida Parapsilosis With Anti-Prelog Stereo-Specificity Length = 279 | Back alignment and structure |
|
| >pdb|3U5T|A Chain A, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Sinorhizobium Meliloti Length = 267 | Back alignment and structure |
|
| >pdb|3OIC|A Chain A, Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl) From B. Subtilis (Apo Form) Length = 258 | Back alignment and structure |
|
| >pdb|2PH3|A Chain A, Crystal Structure Of 3-oxoacyl-[acyl Carrier Protein] Reductase Ttha0415 From Thermus Thermophilus Length = 245 | Back alignment and structure |
|
| >pdb|4IBO|A Chain A, Crystal Structure Of A Putative Gluconate Dehydrogenase From Agrobacterium Tumefaciens (Target Efi-506446) Length = 271 | Back alignment and structure |
|
| >pdb|1X1E|A Chain A, Crystal Structure Of Tt0495 Protein From Thermus Thermophilus Hb8 Length = 239 | Back alignment and structure |
|
| >pdb|4IIN|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier Protein]reductase From Helicobacter Pylori 26695 Complexed With Nad+ Length = 271 | Back alignment and structure |
|
| >pdb|2ZTM|A Chain A, T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase Length = 260 | Back alignment and structure |
|
| >pdb|3KVO|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Hydroxysteroid Dehydrogenase Like 2 (Hsdl2) Length = 346 | Back alignment and structure |
|
| >pdb|3G1T|A Chain A, Crystal Structure Of Short Chain Dehydrogenase From Salmonella Enterica Subsp. Enterica Serovar Typhi Str. Ct18 Length = 258 | Back alignment and structure |
|
| >pdb|3TOX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase In Complex With Nad(P) From Sinorhizobium Meliloti 1021 Length = 280 | Back alignment and structure |
|
| >pdb|2PD6|A Chain A, Structure Of Human Hydroxysteroid Dehydrogenase Type 8, Hsd17b8 Length = 264 | Back alignment and structure |
|
| >pdb|1WMB|A Chain A, Crystal Structure Of Nad Dependent D-3-Hydroxybutylate Dehydrogenase Length = 260 | Back alignment and structure |
|
| >pdb|3TZK|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92a) From Vibrio Cholerae Length = 251 | Back alignment and structure |
|
| >pdb|2ZTU|A Chain A, T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase Complexed With Nad+ Length = 260 | Back alignment and structure |
|
| >pdb|3TZH|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(F187a) From Vibrio Cholerae Length = 251 | Back alignment and structure |
|
| >pdb|3TZC|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(Y155f) From Vibrio Cholerae Length = 251 | Back alignment and structure |
|
| >pdb|3RSH|A Chain A, Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reductase (Fabg) From Vibrio Cholerae O1 Complexed With Nadp+ (Space Group P62) Length = 251 | Back alignment and structure |
|
| >pdb|3TJR|A Chain A, Crystal Structure Of A Rv0851c Ortholog Short Chain Dehydrogenase From Mycobacterium Paratuberculosis Length = 301 | Back alignment and structure |
|
| >pdb|2CFC|A Chain A, Structural Basis For Stereo Selectivity In The (R)- And (S)- Hydroxypropylethane Thiosulfonate Dehydrogenases Length = 250 | Back alignment and structure |
|
| >pdb|3U09|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92d) From Vibrio Cholerae Length = 251 | Back alignment and structure |
|
| >pdb|4E6P|A Chain A, Crystal Structure Of A Probable Sorbitol Dehydrogenase (Target Psi- 012078) From Sinorhizobium Meliloti 1021 Length = 259 | Back alignment and structure |
|
| >pdb|3UN1|A Chain A, Crystal Structure Of An Oxidoreductase From Sinorhizobium Meliloti 1021 Length = 260 | Back alignment and structure |
|
| >pdb|3RIH|A Chain A, Crystal Structure Of A Putative Short Chain Dehydrogenase Or Reductase From Mycobacterium Abscessus Length = 293 | Back alignment and structure |
|
| >pdb|4DML|A Chain A, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Synechococcus Elongatus Pcc 7942 Length = 269 | Back alignment and structure |
|
| >pdb|2GDZ|A Chain A, Crystal Structure Of 15-Hydroxyprostaglandin Dehydrogenase Type1, Complexed With Nad+ Length = 267 | Back alignment and structure |
|
| >pdb|2ET6|A Chain A, (3r)-Hydroxyacyl-Coa Dehydrogenase Domain Of Candida Tropicalis Peroxisomal Multifunctional Enzyme Type 2 Length = 604 | Back alignment and structure |
|
| >pdb|3AI3|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Length = 263 | Back alignment and structure |
|
| >pdb|1K2W|A Chain A, Crystal Structure Of Sorbitol Dehydrogenase From R. Sphaeroides Length = 256 | Back alignment and structure |
|
| >pdb|2EHD|A Chain A, Crystal Structure Analysis Of Oxidoreductase Length = 234 | Back alignment and structure |
|
| >pdb|3NUG|A Chain A, Crystal Structure Of Wild Type Tetrameric Pyridoxal 4-Dehydrogenase From Mesorhizobium Loti Length = 247 | Back alignment and structure |
|
| >pdb|2YZ7|A Chain A, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From Alcaligenes Faecalis Length = 260 | Back alignment and structure |
|
| >pdb|2JAP|A Chain A, Clavulanic Acid Dehydrogenase: Structural And Biochemical Analysis Of The Final Step In The Biosynthesis Of The Beta- Lactamase Inhibitor Clavulanic Acid Length = 247 | Back alignment and structure |
|
| >pdb|1EDO|A Chain A, The X-Ray Structure Of Beta-Keto Acyl Carrier Protein Reductase From Brassica Napus Complexed With Nadp+ Length = 244 | Back alignment and structure |
|
| >pdb|3AI1|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Reveals The Structure Bases Of Its Catalytic Mechanism And High Substrate Selectivity Length = 263 | Back alignment and structure |
|
| >pdb|2B4Q|A Chain A, Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex Length = 276 | Back alignment and structure |
|
| >pdb|3V2H|A Chain A, The Crystal Structure Of D-Beta-Hydroxybutyrate Dehydrogenase From Sinorhizobium Meliloti Length = 281 | Back alignment and structure |
|
| >pdb|3NDR|A Chain A, Crystal Structure Of Tetrameric Pyridoxal 4-Dehydrogenase From Mesorhizobium Loti Length = 247 | Back alignment and structure |
|
| >pdb|2QQ5|A Chain A, Crystal Structure Of Human Sdr Family Member 1 Length = 260 | Back alignment and structure |
|
| >pdb|1NFF|A Chain A, Crystal Structure Of Rv2002 Gene Product From Mycobacterium Tuberculosis Length = 260 | Back alignment and structure |
|
| >pdb|1H5Q|A Chain A, Mannitol Dehydrogenase From Agaricus Bisporus Length = 265 | Back alignment and structure |
|
| >pdb|2PD3|A Chain A, Crystal Structure Of The Helicobacter Pylori Enoyl-Acyl Carrier Protein Reductase In Complex With Hydroxydiphenyl Ether Compounds, Triclosan And Diclosan Length = 275 | Back alignment and structure |
|
| >pdb|3F5S|A Chain A, Crystal Structure Of Putatitve Short Chain Dehydrogenase From Shigella Flexneri 2a Str. 301 Length = 255 | Back alignment and structure |
|
| >pdb|1Q7C|A Chain A, The Structure Of Betaketoacyl-[acp] Reductase Y151f Mutant In Complex With Nadph Fragment Length = 244 | Back alignment and structure |
|
| >pdb|1I01|A Chain A, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein] Reductase From E. Coli. Length = 244 | Back alignment and structure |
|
| >pdb|3SC4|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase (A0qtm2 Homolog) Mycobacterium Thermoresistibile Length = 285 | Back alignment and structure |
|
| >pdb|3IAH|A Chain A, Crystal Structure Of Short Chain Dehydrogenase (ycik) From Salmonella Enterica Subsp. Enterica Serovar Typhimurium Str. Lt2 In Complex With Nadp And Acetate. Length = 256 | Back alignment and structure |
|
| >pdb|3IOY|A Chain A, Structure Of Putative Short-Chain Dehydrogenase (Saro_0793) From Novosphingobium Aromaticivorans Length = 319 | Back alignment and structure |
|
| >pdb|3F5Q|A Chain A, Crystal Structure Of Putative Short Chain Dehydrogenase From Escherichia Coli Cft073 Length = 262 | Back alignment and structure |
|
| >pdb|3OP4|A Chain A, Crystal Structure Of Putative 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Vibrio Cholerae O1 Biovar Eltor Str. N16961 In Complex With Nadp+ Length = 248 | Back alignment and structure |
|
| >pdb|3I4F|A Chain A, Structure Of Putative 3-oxoacyl-reductase From Bacillus Thuringiensis Length = 264 | Back alignment and structure |
|
| >pdb|2JAH|A Chain A, Biochemical And Structural Analysis Of The Clavulanic Acid Dehydeogenase (Cad) From Streptomyces Clavuligerus Length = 247 | Back alignment and structure |
|
| >pdb|2HSD|A Chain A, The Refined Three-Dimensional Structure Of 3alpha,20beta- Hydroxysteroid Dehydrogenase And Possible Roles Of The Residues Conserved In Short-Chain Dehydrogenases Length = 253 | Back alignment and structure |
|
| >pdb|1UZL|A Chain A, Maba From Mycobacterium Tuberculosis Length = 247 | Back alignment and structure |
|
| >pdb|1PR9|A Chain A, Human L-Xylulose Reductase Holoenzyme Length = 244 | Back alignment and structure |
|
| >pdb|2WDZ|A Chain A, Crystal Structure Of The Short Chain Dehydrogenase Galactitol-Dehydrogenase (Gatdh) Of Rhodobacter Sphaeroides In Complex With Nad+ And 1,2-Pentandiol Length = 254 | Back alignment and structure |
|
| >pdb|3D3W|A Chain A, Structure Of L-Xylulose Reductase With Bound Coenzyme, Phosphate And Hydroxide Length = 244 | Back alignment and structure |
|
| >pdb|3LYL|A Chain A, Structure Of 3-Oxoacyl-Acylcarrier Protein Reductase, Fabg From Francisella Tularensis Length = 247 | Back alignment and structure |
|
| >pdb|1NFR|A Chain A, Rv2002 Gene Product From Mycobacterium Tuberculosis Length = 260 | Back alignment and structure |
|
| >pdb|3ENN|A Chain A, 2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE FROM BRUCELLA Melitensis (P43212) Length = 249 | Back alignment and structure |
|
| >pdb|3F1L|A Chain A, The 0.95 A Structure Of An Oxidoreductase, Ycik From E.Coli Length = 252 | Back alignment and structure |
|
| >pdb|2CF2|E Chain E, Architecture Of Mammalian Fatty Acid Synthase Length = 226 | Back alignment and structure |
|
| >pdb|3O26|A Chain A, The Structure Of Salutaridine Reductase From Papaver Somniferum Length = 311 | Back alignment and structure |
|
| >pdb|3EMK|A Chain A, 2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE From Brucella Melitensis Length = 246 | Back alignment and structure |
|
| >pdb|1XSE|A Chain A, Crystal Structure Of Guinea Pig 11beta-Hydroxysteroid Dehydrogenase Type 1 Length = 295 | Back alignment and structure |
|
| >pdb|3QLJ|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Mycobacterium Avium Length = 322 | Back alignment and structure |
|
| >pdb|3T7C|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Avium Bound To Nad Length = 299 | Back alignment and structure |
|
| >pdb|3OEC|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Thermoresistibile Length = 317 | Back alignment and structure |
|
| >pdb|3VTZ|A Chain A, Structure Of Thermoplasma Volcanium Aldohexose Dehydrogenase Length = 269 | Back alignment and structure |
|
| >pdb|3SVT|A Chain A, Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Ulcerans Length = 281 | Back alignment and structure |
|
| >pdb|1BDB|A Chain A, Cis-Biphenyl-2,3-Dihydrodiol-2,3-Dehydrogenase From Pseudomonas Sp. Lb400 Length = 277 | Back alignment and structure |
|
| >pdb|2NTN|A Chain A, Crystal Structure Of Maba-c60v/g139a/s144l Length = 267 | Back alignment and structure |
|
| >pdb|2Z1N|A Chain A, Crystal Structure Of Ape0912 From Aeropyrum Pernix K1 Length = 260 | Back alignment and structure |
|
| >pdb|3DWF|A Chain A, Crystal Structure Of The Guinea Pig 11beta-Hydroxysteroid Dehydrogenase Type 1 Mutant F278e Length = 276 | Back alignment and structure |
|
| >pdb|3G49|A Chain A, N-(Pyridin-2-Yl) Arylsulfonamide Inhibitors Of 11b-Hydroxysteroid Dehydrogenase Type 1: Discovery Of Pf-915275 Length = 277 | Back alignment and structure |
|
| >pdb|1UZM|A Chain A, Maba From Mycobacterium Tuberculosis Length = 247 | Back alignment and structure |
|
| >pdb|3TFO|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl-Carrier-Protein) Reductase From Sinorhizobium Meliloti Length = 264 | Back alignment and structure |
|
| >pdb|1HDC|A Chain A, Mechanism Of Inhibition Of 3alpha,20beta-Hydroxysteroid Dehydrogenase By A Licorice-Derived Steroidal Inhibitor Length = 254 | Back alignment and structure |
|
| >pdb|3LZ6|A Chain A, Guinea Pig 11beta Hydroxysteroid Dehydrogenase With Pf-877423 Length = 263 | Back alignment and structure |
|
| >pdb|1CYD|A Chain A, Carbonyl Reductase Complexed With Nadph And 2-Propanol Length = 244 | Back alignment and structure |
|
| >pdb|3PXX|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Avium Bound To Nicotinamide Adenine Dinucleotide Length = 287 | Back alignment and structure |
|
| >pdb|3UVE|A Chain A, Crystal Structure Of Carveol Dehydrogenase ((+)-Trans-Carveol Dehydrogenase) From Mycobacterium Avium Length = 286 | Back alignment and structure |
|
| >pdb|4HP8|A Chain A, Crystal Structure Of A Putative 2-Deoxy-D-Gluconate 3-Dehydrogenase From Agrobacterium Tumefaciens (Target Efi-506435) With Bound Nadp Length = 247 | Back alignment and structure |
|
| >pdb|2BGK|A Chain A, X-Ray Structure Of Apo-Secoisolariciresinol Dehydrogenase Length = 278 | Back alignment and structure |
|
| >pdb|3LF1|A Chain A, Apo Structure Of The Short Chain Oxidoreductase Q9hya2 From Pseudomonas Aeruginosa Pao1 Containing An Atypical Catalytic Center Length = 265 | Back alignment and structure |
|
| >pdb|3PGX|A Chain A, Crystal Structure Of A Putative Carveol Dehydrogenase From Mycobacterium Paratuberculosis Bound To Nicotinamide Adenine Dinucleotide Length = 280 | Back alignment and structure |
|
| >pdb|3F4B|A Chain A, Crystal Structure Of Plasmodium Berghei Enoyl-Acyl-Carrier- Protein Reductase With Triclosan Length = 323 | Back alignment and structure |
|
| >pdb|1ZBQ|A Chain A, Crystal Structure Of Human 17-beta-hydroxysteroid Dehydrogenase Type 4 In Complex With Nad Length = 327 | Back alignment and structure |
|
| >pdb|3GK3|A Chain A, Crystal Structure Of Acetoacetyl-Coa Reductase From Burkholderia Pseudomallei 1710b Length = 269 | Back alignment and structure |
|
| >pdb|3AFM|A Chain A, Crystal Structure Of Aldose Reductase A1-R Responsible For Alginate Metabolism Length = 258 | Back alignment and structure |
|
| >pdb|3OML|A Chain A, Structure Of Full-Length Peroxisomal Multifunctional Enzyme Type 2 From Drosophila Melanogaster Length = 613 | Back alignment and structure |
|
| >pdb|3EDM|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Agrobacterium Tumefaciens Length = 259 | Back alignment and structure |
|
| >pdb|3TL3|A Chain A, Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Ulcerans Length = 257 | Back alignment and structure |
|
| >pdb|3I1J|A Chain A, Structure Of A Putative Short Chain Dehydrogenase From Pseudomonas Syringae Length = 247 | Back alignment and structure |
|
| >pdb|4BB6|A Chain A, Free-Wilson And Structural Approaches To Co-Optimising Human And Rodent Isoform Potency For 11b-Hydroxysteroid Dehydrogenase Type 1 11b-Hsd1 Inhibitors Length = 292 | Back alignment and structure |
|
| >pdb|2Q2Q|A Chain A, Structure Of D-3-Hydroxybutyrate Dehydrogenase From Pseudomonas Putida Length = 255 | Back alignment and structure |
|
| >pdb|3GRP|A Chain A, 2.1 Angstrom Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Bartonella Henselae Length = 266 | Back alignment and structure |
|
| >pdb|3SJU|A Chain A, Hedamycin Polyketide Ketoreductase Bound To Nadph Length = 279 | Back alignment and structure |
|
| >pdb|2PTG|A Chain A, Crystal Structure Of Eimeria Tenella Enoyl Reductase Length = 319 | Back alignment and structure |
|
| >pdb|2O2S|A Chain A, The Structure Of T. Gondii Enoyl Acyl Carrier Protein Reductase In Complex With Nad And Triclosan Length = 315 | Back alignment and structure |
|
| >pdb|4ESO|A Chain A, Crystal Structure Of A Putative Oxidoreductase Protein From Sinorhizobium Meliloti 1021 In Complex With Nadp Length = 255 | Back alignment and structure |
|
| >pdb|3VC7|A Chain A, Crystal Structure Of A Putative Oxidoreductase From Sinorhizobium Meliloti 1021 Length = 254 | Back alignment and structure |
|
| >pdb|3E9Q|A Chain A, Crystal Structure Of The Short Chain Dehydrogenase From Shigella Flexneri Length = 273 | Back alignment and structure |
|
| >pdb|3D5Q|A Chain A, Crystal Structure Of 11b-Hsd1 In Complex With Triazole Inhibitor Length = 272 | Back alignment and structure |
|
| >pdb|3PDJ|A Chain A, Crystal Structure Of Human 11-Beta-Hydroxysteroid Dehydrogenase 1 (11b-Hsd1) In Complex With 4,4-Disubstituted Cyclohexylbenzamide Inhibitor Length = 273 | Back alignment and structure |
|
| >pdb|4BB5|A Chain A, Free-Wilson And Structural Approaches To Co-Optimising Human And Rodent Isoform Potency For 11b-Hydroxysteroid Dehydrogenase Type 1 11b-Hsd1 Inhibitors Length = 292 | Back alignment and structure |
|
| >pdb|1XU7|A Chain A, Crystal Structure Of The Interface Open Conformation Of Tetrameric 11b-hsd1 Length = 286 | Back alignment and structure |
|
| >pdb|4HFR|A Chain A, Human 11beta-Hydroxysteroid Dehydrogenase Type 1 In Complex With An Orally Bioavailable Acidic Inhibitor Azd4017. Length = 272 | Back alignment and structure |
|
| >pdb|2DTD|A Chain A, Structure Of Thermoplasma Acidophilum Aldohexose Dehydrogenase (aldt) In Ligand-free Form Length = 264 | Back alignment and structure |
|
| >pdb|2ILT|A Chain A, Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) With Nadp And Adamantane Sulfone Inhibitor Length = 275 | Back alignment and structure |
|
| >pdb|2IRW|A Chain A, Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) With Nadp And Adamantane Ether Inhibitor Length = 264 | Back alignment and structure |
|
| >pdb|2ZK7|A Chain A, Structure Of A C-Terminal Deletion Mutant Of Thermoplasma Acidophilum Aldohexose Dehydrogenase (Aldt) Length = 257 | Back alignment and structure |
|
| >pdb|2O50|A Chain A, The Crystal Structure Of Toxoplasma Gondii Enoyl Acyl Carrier Protein Reductase Length = 315 | Back alignment and structure |
|
| >pdb|2RBE|A Chain A, The Discovery Of 2-Anilinothiazolones As 11beta-Hsd1 Inhibitors Length = 275 | Back alignment and structure |
|
| >pdb|3CH6|A Chain A, Crystal Structure Of 11beta-Hsd1 Double Mutant (L262r, F278e) Complexed With (3,3-Dimethylpiperidin-1-Yl)(6-(3- Fluoro-4-Methylphenyl)pyridin-2-Yl)methanone Length = 286 | Back alignment and structure |
|
| >pdb|2BEL|A Chain A, Structure Of Human 11-Beta-Hydroxysteroid Dehydrogenase In Complex With Nadp And Carbenoxolone Length = 283 | Back alignment and structure |
|
| >pdb|2O2Y|A Chain A, The Crystal Structure Of P. Falciparum Enoyl Acyl Carrier Protein Reductase Length = 349 | Back alignment and structure |
|
| >pdb|3AM3|A Chain A, A372m Mutant Of Enoyl-Acp Reductase From Plasmodium Falciparum (Pfenr) In Complex With Triclosan Length = 329 | Back alignment and structure |
|
| >pdb|1VRW|A Chain A, Crystal Structure Analysis Of Plasmodium Falciparum Enoyl- Acyl-Carrier-Protein Reductase With Nadh Length = 336 | Back alignment and structure |
|
| >pdb|1UH5|A Chain A, Crystal Structure Of Enoyl-Acp Reductase With Triclosan At 2.2angstroms Length = 329 | Back alignment and structure |
|
| >pdb|2FOI|A Chain A, Synthesis, Biological Activity, And X-Ray Crystal Structural Analysis Of Diaryl Ether Inhibitors Of Malarial Enoyl Acp Reductase. Length = 269 | Back alignment and structure |
|
| >pdb|2OL4|A Chain A, Crystal Structure Of Plasmodium Falciparum Enoyl Acp Reductase With Triclosan Reductase Length = 338 | Back alignment and structure |
|
| >pdb|2NM0|A Chain A, Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl Carrier Protein Reductase From Streptomyces Coelicolor A3(2) Length = 253 | Back alignment and structure |
|
| >pdb|1NHG|A Chain A, Crystal Structure Analysis Of Plasmodium Falciparum Enoyl- Acyl-Carrier-Protein Reductase With Triclosan Length = 229 | Back alignment and structure |
|
| >pdb|3GMD|A Chain A, Structure-Based Design Of 7-Azaindole-Pyrrolidines As Inhibitors Of 11beta-Hydroxysteroid-Dehydrogenase Type I Length = 264 | Back alignment and structure |
|
| >pdb|3F1K|A Chain A, Crystal Structure Of Ycik From E. Coli, An Oxidoreductase, Complexed With Nadp+ At 2.6a Resolution Length = 252 | Back alignment and structure |
|
| >pdb|3U9L|A Chain A, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Reductase (Nadph) From Sinorhizobium Meliloti Length = 324 | Back alignment and structure |
|
| >pdb|1Y5M|A Chain A, The Crystal Structure Of Murine 11b-Hydroxysteroid Dehydrogenase: An Important Therapeutic Target For Diabetes Length = 276 | Back alignment and structure |
|
| >pdb|2AG5|A Chain A, Crystal Structure Of Human Dhrs6 Length = 246 | Back alignment and structure |
|
| >pdb|3SX2|A Chain A, Crystal Structure Of A Putative 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Mycobacterium Paratuberculosis In Complex With Nad Length = 278 | Back alignment and structure |
|
| >pdb|3UWR|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Avium Strain 104 Length = 286 | Back alignment and structure |
|
| >pdb|1IOL|A Chain A, Estrogenic 17-beta Hydroxysteroid Dehydrogenase Complexed 17-beta- Estradiol Length = 327 | Back alignment and structure |
|
| >pdb|3T4X|A Chain A, Short Chain DehydrogenaseREDUCTASE FAMILY OXIDOREDUCTASE FROM Bacillus Anthracis Str. Ames Ancestor Length = 267 | Back alignment and structure |
|
| >pdb|3S55|A Chain A, Crystal Structure Of A Putative Short-Chain DehydrogenaseREDUCTASE From Mycobacterium Abscessus Bound To Nad Length = 281 | Back alignment and structure |
|
| >pdb|1N5D|A Chain A, Crystal Structure Of Porcine Testicular Carbonyl Reductase 20beta-Hydroxysteroid Dehydrogenase Length = 288 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* Length = 302 | Back alignment and structure |
|---|
Score = 279 bits (715), Expect = 9e-95
Identities = 77/249 (30%), Positives = 124/249 (49%), Gaps = 10/249 (4%)
Query: 2 ESPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHS-LG 60
++ + +GKVA +TGGG+G+G ++ L GA I R+ VL++ + S G
Sbjct: 16 KAMLPPNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTG 75
Query: 61 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID 120
++ DVR + V I G +I++N AAGNF+ P E LSPN ++T+ +I
Sbjct: 76 NKVHAIQCDVRDPDMVQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIV 135
Query: 121 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSIT 180
GT + E K L K + G ++I+ T + + + ++AKA V++++
Sbjct: 136 LNGTAFVTLEIGKQLIKAQK-------GAAFLSITTIYAETGSGFVVPSASAKAGVEAMS 188
Query: 181 RSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP-EEIRSKATDYMAAYKFGEKWDIAMA 239
+SLA EWG Y +R N I PGPIK S+L P + + + G ++A
Sbjct: 189 KSLAAEWG-KYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPCGRLGTVEELANL 247
Query: 240 ALYLASDAG 248
A +L SD
Sbjct: 248 AAFLCSDYA 256
|
| >4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* Length = 277 | Back alignment and structure |
|---|
Score = 276 bits (709), Expect = 3e-94
Identities = 98/249 (39%), Positives = 135/249 (54%), Gaps = 11/249 (4%)
Query: 2 ESPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAAL-HSLG 60
F D+L+ KVA +TGGGSGIGF I+ +HG I R + +A L + G
Sbjct: 17 RHLFCPDLLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATG 76
Query: 61 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID 120
+ L DVR + V+ + FG++DIL+N AAGNFL PA LS N F+TV++ID
Sbjct: 77 RRCLPLSMDVRAPPAVMAAVDQALKEFGRIDILINCAAGNFLCPAGALSFNAFKTVMDID 136
Query: 121 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSIT 180
+ GTF + + + GG+I+NI+ATL Q+H +AKAAVD++T
Sbjct: 137 TSGTFNVSRVLYEKFFRDH--------GGVIVNITATLGNRGQALQVHAGSAKAAVDAMT 188
Query: 181 RSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP-EEIRSKATDYMAAYKFGEKWDIAMA 239
R LA+EWG IRVN +APGPI T G+ +L + S + G K +IA +
Sbjct: 189 RHLAVEWGP-QNIRVNSLAPGPISGTEGLRRLGGPQASLSTKVTASPLQRLGNKTEIAHS 247
Query: 240 ALYLASDAG 248
LYLAS
Sbjct: 248 VLYLASPLA 256
|
| >3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} Length = 257 | Back alignment and structure |
|---|
Score = 275 bits (705), Expect = 8e-94
Identities = 96/241 (39%), Positives = 134/241 (55%), Gaps = 8/241 (3%)
Query: 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLE 67
+ +K KV ++TGG SG+G ++ + K GA + I GR K L A + + ++
Sbjct: 2 NAMKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQ 61
Query: 68 GDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIM 127
DVR +D +++E FG++DIL+N AAGNF+ PAEDLS NG+ +VI I GTF
Sbjct: 62 MDVRNTDDIQKMIEQIDEKFGRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYC 121
Query: 128 CHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEW 187
KY + G G IIN+ AT + A IH +AAKA V ++T++LA+EW
Sbjct: 122 SQAIGKYWIEKGI-------KGNIINMVATYAWDAGPGVIHSAAAKAGVLAMTKTLAVEW 174
Query: 188 GTDYAIRVNGIAPGPIKDTAGVSKLAP-EEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246
G Y IRVN IAPGPI+ T G KL EE+ + + + G +IA A YL SD
Sbjct: 175 GRKYGIRVNAIAPGPIERTGGADKLWISEEMAKRTIQSVPLGRLGTPEEIAGLAYYLCSD 234
Query: 247 A 247
Sbjct: 235 E 235
|
| >1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 Length = 303 | Back alignment and structure |
|---|
Score = 229 bits (587), Expect = 2e-75
Identities = 78/253 (30%), Positives = 122/253 (48%), Gaps = 17/253 (6%)
Query: 2 ESPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAAL----- 56
S +L+G+VA++TGG +GIG I +L + G+ + I R+ L+SA L
Sbjct: 8 RSYLAPGLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLP 67
Query: 57 HSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTV 116
+ I ++ ++R E+ +V+ST++ FGK++ LVN G FL PAE +S G+ V
Sbjct: 68 PTKQARVIPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAV 127
Query: 117 IEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAV 176
+E + GTF MC K GG I+NI +H AA+A V
Sbjct: 128 LETNLTGTFYMCKAVYSSWMKEH--------GGSIVNIIVP-TKAGFPLAVHSGAARAGV 178
Query: 177 DSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP--EEIRSKATDYMAAYKFGEKW 234
++T+SLALEW IR+N +APG I V + + + A + G
Sbjct: 179 YNLTKSLALEWAC-SGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGVPE 237
Query: 235 DIAMAALYLASDA 247
+++ +L S A
Sbjct: 238 EVSSVVCFLLSPA 250
|
| >3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} Length = 264 | Back alignment and structure |
|---|
Score = 190 bits (485), Expect = 2e-60
Identities = 52/248 (20%), Positives = 107/248 (43%), Gaps = 20/248 (8%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L KV +++G G +G ++ + + GA + + R L + G A+ + D
Sbjct: 9 LTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTD 68
Query: 70 VRKREDAVRVVESTINHFGKLDILV-NAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
+ +V+ T+ +G++D+++ NA + P + + R IE+ G +
Sbjct: 69 ITDDAQVAHLVDETMKAYGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLI 128
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
L++ G ++N+++ + + AK+A+ +++++LA E G
Sbjct: 129 QGFTPALEES---------KGAVVNVNSMVVRHSQAKYGAYKMAKSALLAMSQTLATELG 179
Query: 189 TDYAIRVNGIAPGPIK---------DTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMA 239
+ IRVN + PG I AG + E+I + A + + ++A A
Sbjct: 180 -EKGIRVNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAAGSDLKRLPTEDEVASA 238
Query: 240 ALYLASDA 247
L++ASD
Sbjct: 239 ILFMASDL 246
|
| >2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* Length = 260 | Back alignment and structure |
|---|
Score = 185 bits (472), Expect = 2e-58
Identities = 69/252 (27%), Positives = 110/252 (43%), Gaps = 18/252 (7%)
Query: 1 MESPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG 60
M + L+G AL+TGG GIG+ I +L GA++ R + L + S G
Sbjct: 1 MAGRWN---LEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKG 57
Query: 61 IPAIGLEGDVRKREDAVRVVESTINHF-GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEI 119
D+ R + ++ + NHF GKL+ILVN A A+D + + ++ I
Sbjct: 58 FKVEASVCDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSI 117
Query: 120 DSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSI 179
+ + + A +LK G ++ IS+ A Y+ A K A+D +
Sbjct: 118 NFEAAYHLSVLAHPFLKASE--------RGNVVFISSVSGALAVPYEAVYGATKGAMDQL 169
Query: 180 TRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAY----KFGEKWD 235
TR LA EW D IRVNG+ PG I T+ V + + + + + + GE +
Sbjct: 170 TRCLAFEWAKD-NIRVNGVGPGVIA-TSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKE 227
Query: 236 IAMAALYLASDA 247
+A +L A
Sbjct: 228 LAAMVAFLCFPA 239
|
| >4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A Length = 255 | Back alignment and structure |
|---|
Score = 183 bits (468), Expect = 5e-58
Identities = 54/243 (22%), Positives = 98/243 (40%), Gaps = 18/243 (7%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
+GK A++ GG G+G +L + GA + + GR ++ + G L D
Sbjct: 6 YQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEF---GPRVHALRSD 62
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
+ + + + G +D+L A + L P + +S + +++ G F
Sbjct: 63 IADLNEIAVLGAAAGQTLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQ 122
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
+++GG I+ S+ SA+KAA+ S LA E
Sbjct: 123 RLTPLIREGGS----------IVFTSSVADEGGHPGMSVYSASKAALVSFASVLAAELL- 171
Query: 190 DYAIRVNGIAPGPIK----DTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245
IRVN ++PG I AG+++ E ++ + + G ++A A L+LA
Sbjct: 172 PRGIRVNSVSPGFIDTPTKGVAGITEAERAEFKTLGDNITPMKRNGTADEVARAVLFLAF 231
Query: 246 DAG 248
+A
Sbjct: 232 EAT 234
|
| >4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} Length = 273 | Back alignment and structure |
|---|
Score = 183 bits (468), Expect = 9e-58
Identities = 69/244 (28%), Positives = 117/244 (47%), Gaps = 21/244 (8%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L K+A++TG SGIG + + GA + I GRRK VL +A+A + G A+G++ D
Sbjct: 27 LNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEI---GGGAVGIQAD 83
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
+ R+ E G++D+L A G ++P +++ + + + G
Sbjct: 84 SANLAELDRLYEKVKAEAGRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQ 143
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
+AL L +G ++ +T T T +A+KAA+ S R+ L+
Sbjct: 144 KALPLLARGSS----------VVLTGSTAGSTGTPAFSVYAASKAALRSFARNWILDLK- 192
Query: 190 DYAIRVNGIAPGPIKDTAGVSKLA--PEEIRSKATDYMAAY----KFGEKWDIAMAALYL 243
D IR+N ++PGP +T G+ +LA + + +AA + G ++A AAL+L
Sbjct: 193 DRGIRINTLSPGPT-ETTGLVELAGKDPVQQQGLLNALAAQVPMGRVGRAEEVAAAALFL 251
Query: 244 ASDA 247
ASD
Sbjct: 252 ASDD 255
|
| >2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* Length = 260 | Back alignment and structure |
|---|
Score = 183 bits (466), Expect = 1e-57
Identities = 66/241 (27%), Positives = 109/241 (45%), Gaps = 12/241 (4%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L+ KVAL+T GIG I+ +L + GA + + R++ + VA L G+ G
Sbjct: 12 LENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCH 71
Query: 70 VRKREDAVRVVESTINHFGKLDILV-NAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
V K ED R+V +N G +DILV NAA F D + + ++ ++ T +M
Sbjct: 72 VGKAEDRERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMT 131
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
+ ++K G GG ++ +S+ Y + +K A+ +T++LA+E
Sbjct: 132 KAVVPEMEKRG--------GGSVLIVSSVGAYHPFPNLGPYNVSKTALLGLTKNLAVELA 183
Query: 189 TDYAIRVNGIAPGPIKDTAGVSKL-APEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247
IRVN +APG IK T L + + + + + G D A +L S+
Sbjct: 184 -PRNIRVNCLAPGLIK-TNFSQVLWMDKARKEYMKESLRIRRLGNPEDCAGIVSFLCSED 241
Query: 248 G 248
Sbjct: 242 A 242
|
| >1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* Length = 255 | Back alignment and structure |
|---|
Score = 183 bits (466), Expect = 1e-57
Identities = 70/238 (29%), Positives = 109/238 (45%), Gaps = 11/238 (4%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L GK A++TG G+GIG EI++ GA++ + V + LG A D
Sbjct: 9 LDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCD 68
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
+ ++ + + I+ GK+DILVN A G D+ FR E++ F +
Sbjct: 69 ITSEQELSALADFAISKLGKVDILVNNAGGGG-PKPFDMPMADFRRAYELNVFSFFHLSQ 127
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
++K G GG+I+ I++ +++KAA + R++A + G
Sbjct: 128 LVAPEMEKNG--------GGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLGE 179
Query: 190 DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247
IRVNGIAPG I T + + EI K + + G+ DIA AAL+L S A
Sbjct: 180 -KNIRVNGIAPGAI-LTDALKSVITPEIEQKMLQHTPIRRLGQPQDIANAALFLCSPA 235
|
| >1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 Length = 273 | Back alignment and structure |
|---|
Score = 183 bits (467), Expect = 1e-57
Identities = 63/243 (25%), Positives = 106/243 (43%), Gaps = 14/243 (5%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
LKG AL+TGG GIG+ I +L GA + R + L + G+ G D
Sbjct: 19 LKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCD 78
Query: 70 VRKREDAVRVVESTINHF-GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
+ R + +++++ + F GKL+ILVN A A+D + + ++ + + +
Sbjct: 79 LLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLS 138
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
A LK G +I +S+ ++A SA+K A++ +T+SLA EW
Sbjct: 139 QIAYPLLKASQ--------NGNVIFLSSIAGFSALPSVSLYSASKGAINQMTKSLACEWA 190
Query: 189 TDYAIRVNGIAPGPIK----DTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLA 244
IRVN +APG I +TA +E + G+ +++ +L
Sbjct: 191 -KDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQEVSALIAFLC 249
Query: 245 SDA 247
A
Sbjct: 250 FPA 252
|
| >4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} Length = 266 | Back alignment and structure |
|---|
Score = 181 bits (463), Expect = 5e-57
Identities = 60/240 (25%), Positives = 98/240 (40%), Gaps = 11/240 (4%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAAL-HSLGIPAIGLEG 68
L GK AL+TG GIG +I+ GA + + GR + L +A AL G +
Sbjct: 18 LDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAI 77
Query: 69 DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
D+ + + + FG LD+LVN A + P D P F I ++ ++
Sbjct: 78 DLAEPDAPAELARRAAEAFGGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLA 137
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
K + G GG II +++ +KA + T+ LA E G
Sbjct: 138 SAVGKAMVAAGE-------GGAIITVASAAALAPLPDHYAYCTSKAGLVMATKVLARELG 190
Query: 189 TDYAIRVNGIAPGPIKDTAGVSKL-APEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247
+ IR N + P + T ++ E + + +F +++ A ++LASDA
Sbjct: 191 -PHGIRANSVCPTVV-LTEMGQRVWGDEAKSAPMIARIPLGRFAVPHEVSDAVVWLASDA 248
|
| >3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} Length = 276 | Back alignment and structure |
|---|
Score = 181 bits (462), Expect = 7e-57
Identities = 60/240 (25%), Positives = 106/240 (44%), Gaps = 13/240 (5%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L GK AL+TG +GIG +++L + GA +A+ R L+ + +G A+ + D
Sbjct: 30 LSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCD 89
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
V + + +++ G +DI V A + D+ F+ + + + G F+
Sbjct: 90 VTQPDQVRGMLDQMTGELGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQ 149
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVS--AAKAAVDSITRSLALEW 187
A + + G GG II ++ + Q +KAAV +T+++A+E
Sbjct: 150 AAARAMVDQGL-------GGTIITTASMSGHIINIPQQVSHYCTSKAAVVHLTKAMAVEL 202
Query: 188 GTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247
+ IRVN ++PG I T V L + + + + G ++ LYLAS A
Sbjct: 203 A-PHQIRVNSVSPGYI-RTELVEPL--ADYHALWEPKIPLGRMGRPEELTGLYLYLASAA 258
|
| >3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} Length = 260 | Back alignment and structure |
|---|
Score = 181 bits (461), Expect = 8e-57
Identities = 64/242 (26%), Positives = 97/242 (40%), Gaps = 14/242 (5%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L +VA++TGG IG L + GA + I + + AV L G + D
Sbjct: 11 LDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMD 70
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFL-VPAEDLSPNGFRTVIEIDSVGTFIMC 128
V E V S G++DILV A V AED++ + ++I+ G F C
Sbjct: 71 VTNTESVQNAVRSVHEQEGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSC 130
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY--QIHVSAAKAAVDSITRSLALE 186
+ + + G+I+ I + Q +A+KA V RSLA E
Sbjct: 131 QAVGRIMLEQK--------QGVIVAIGSMSGLIVNRPQQQAAYNASKAGVHQYIRSLAAE 182
Query: 187 WGTDYAIRVNGIAPGPIKDTAGVSKL-APEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245
W + IR N +AP I +T E+ + G+ ++A +LAS
Sbjct: 183 WA-PHGIRANAVAPTYI-ETTLTRFGMEKPELYDAWIAGTPMGRVGQPDEVASVVQFLAS 240
Query: 246 DA 247
DA
Sbjct: 241 DA 242
|
| >4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} Length = 255 | Back alignment and structure |
|---|
Score = 180 bits (460), Expect = 8e-57
Identities = 65/248 (26%), Positives = 103/248 (41%), Gaps = 13/248 (5%)
Query: 1 MESPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG 60
M + F L GK AL+TG G+GF + L GA + + R T+L +V L G
Sbjct: 1 MTALFD---LTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKG 57
Query: 61 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID 120
A G+ DV +DIL+N A + P +L ++ VI+ +
Sbjct: 58 YDAHGVAFDVTDELAIEAAFSKLDAEGIHVDILINNAGIQYRKPMVELELENWQKVIDTN 117
Query: 121 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSIT 180
F++ A K + GG IINI + A +AAK + +T
Sbjct: 118 LTSAFLVSRSAAKRMIARNS-------GGKIINIGSLTSQAARPTVAPYTAAKGGIKMLT 170
Query: 181 RSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKA-TDYMAAYKFGEKWDIAMA 239
S+A EW + I+ N I PG I T + L ++ + ++G ++
Sbjct: 171 CSMAAEWA-QFNIQTNAIGPGYI-LTDMNTALIEDKQFDSWVKSSTPSQRWGRPEELIGT 228
Query: 240 ALYLASDA 247
A++L+S A
Sbjct: 229 AIFLSSKA 236
|
| >1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 280 | Back alignment and structure |
|---|
Score = 181 bits (462), Expect = 8e-57
Identities = 61/253 (24%), Positives = 111/253 (43%), Gaps = 27/253 (10%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIP---AIGL 66
K ++TG +GIG ++ + GA + I GR L + G+ +
Sbjct: 4 FSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSV 63
Query: 67 EGDVRKREDAVRVVESTINHFGKLDILVNAA----AGNFLVPAEDLSPNGFRTVIEIDSV 122
DV + +++ ST+ FGK+D+LVN A F D + + ++++
Sbjct: 64 VADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQ 123
Query: 123 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH-YTATWYQIHVSAAKAAVDSITR 181
M + +L G I+N+S+ + A ++ + AKAA+D TR
Sbjct: 124 AVIEMTKKVKPHLVAS---------KGEIVNVSSIVAGPQAQPDFLYYAIAKAALDQYTR 174
Query: 182 SLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA-PEEIRSKATDYMAAYK-------FGEK 233
S A++ + IRVN ++PG + +T + + P++ K ++MA++K G+
Sbjct: 175 STAIDLA-KFGIRVNSVSPGMV-ETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKP 232
Query: 234 WDIAMAALYLASD 246
IA L+LA
Sbjct: 233 EHIANIILFLADR 245
|
| >3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} Length = 281 | Back alignment and structure |
|---|
Score = 181 bits (461), Expect = 1e-56
Identities = 67/243 (27%), Positives = 110/243 (45%), Gaps = 15/243 (6%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG---IPAIGL 66
+ + L+TGGGSGIG ++ L GA++ I+GR L AV L +LG
Sbjct: 9 FQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYE 68
Query: 67 EGDVRKREDAVRVVESTINHFGKLDILVNAAAGN-FLVPAEDLSPNGFRTVIEIDSVGTF 125
D+ ++ R V++ G+L +V+ A G+ + P + +R ++++ GT
Sbjct: 69 PTDITNEDETARAVDAVTAWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTM 128
Query: 126 IMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLAL 185
+ A + + +GG GG + IS+ + K+AVD + + A
Sbjct: 129 YVLKHAAREMVRGG--------GGSFVGISSIAASNTHRWFGAYGVTKSAVDHLMQLAAD 180
Query: 186 EWGTDYAIRVNGIAPGPIKDTAGVSKL-APEEIRSKATDYMAAYKFGEKWDIAMAALYLA 244
E G +RVN I PG I T V+ + E+ S + GE D+A A++L
Sbjct: 181 ELG-ASWVRVNSIRPGLI-RTDLVAAITESAELSSDYAMCTPLPRQGEVEDVANMAMFLL 238
Query: 245 SDA 247
SDA
Sbjct: 239 SDA 241
|
| >1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A Length = 266 | Back alignment and structure |
|---|
Score = 180 bits (458), Expect = 2e-56
Identities = 63/239 (26%), Positives = 97/239 (40%), Gaps = 11/239 (4%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
LK K L+TGG GIG I + GA I R + L ++ G G D
Sbjct: 12 LKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCD 71
Query: 70 VRKREDAVRVVESTINHFG-KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
R + +++++ + FG KLDIL+N P D + F I + + +
Sbjct: 72 ASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLS 131
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
A LK G G II +S+ + SA K A++ + R+LA EW
Sbjct: 132 QLAHPLLKASG--------CGNIIFMSSIAGVVSASVGSIYSATKGALNQLARNLACEWA 183
Query: 189 TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247
+D IR N +AP I T + +E + +FGE +++ +L A
Sbjct: 184 SD-GIRANAVAPAVIA-TPLAEAVYDDEFKKVVISRKPLGRFGEPEEVSSLVAFLCMPA 240
|
| >1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A Length = 251 | Back alignment and structure |
|---|
Score = 177 bits (451), Expect = 2e-55
Identities = 66/239 (27%), Positives = 105/239 (43%), Gaps = 10/239 (4%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L GKVA++TGG GIG I+ + + GA + I GR V A ++ + + D
Sbjct: 4 LDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPD-QIQFFQHD 62
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
+ ++ ++T FG + LVN A E+ + +R ++ ++ G F
Sbjct: 63 SSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTR 122
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
++ +K G G IIN+S+ + +A+K AV +++S AL+
Sbjct: 123 LGIQRMKNKGL-------GASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCAL 175
Query: 190 -DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247
DY +RVN + PG I T V L E GE DIA +YLAS+
Sbjct: 176 KDYDVRVNTVHPGYI-KTPLVDDLPGAEEAMSQRTKTPMGHIGEPNDIAYICVYLASNE 233
|
| >1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 278 | Back alignment and structure |
|---|
Score = 177 bits (452), Expect = 2e-55
Identities = 69/253 (27%), Positives = 106/253 (41%), Gaps = 27/253 (10%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIP---AIGL 66
KVA++TG +GIG ++ + GA + I GR L + + G+ +
Sbjct: 4 FAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSV 63
Query: 67 EGDVRKREDAVRVVESTINHFGKLDILVNAA----AGNFLVPAEDLSPNGFRTVIEIDSV 122
DV ++ +T+ FGKLDILVN A + S + + ++
Sbjct: 64 VADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLR 123
Query: 123 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH-YTATWYQIHVSAAKAAVDSITR 181
+ +A+ +L G I+NIS+ AT + S AKAA+D TR
Sbjct: 124 SVIALTKKAVPHLSST---------KGEIVNISSIASGLHATPDFPYYSIAKAAIDQYTR 174
Query: 182 SLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA-PEEIRSKATDYMAAYK-------FGEK 233
+ A++ + IRVN I+PG + T S + PEE K MA K G+
Sbjct: 175 NTAIDLI-QHGIRVNSISPGLV-ATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQP 232
Query: 234 WDIAMAALYLASD 246
DIA +LA
Sbjct: 233 QDIAEVIAFLADR 245
|
| >3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} Length = 262 | Back alignment and structure |
|---|
Score = 176 bits (449), Expect = 4e-55
Identities = 51/242 (21%), Positives = 89/242 (36%), Gaps = 15/242 (6%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAI---MGRRKTVLRSAVAALHSLGIPAIGL 66
LK KV ++ GG +G + + + + L G
Sbjct: 9 LKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALY 68
Query: 67 EGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFI 126
+ D+ E+ ++ + FGK+DI +N P + S F + I++ +
Sbjct: 69 QSDLSNEEEVAKLFDFAEKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYF 128
Query: 127 MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALE 186
+A K++ G II I+ +L T + + KA V+ TR+ + E
Sbjct: 129 FIKQAAKHMNPNGH----------IITIATSLLAAYTGFYSTYAGNKAPVEHYTRAASKE 178
Query: 187 WGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246
I VN IAPGP+ DT+ +E + + + DIA +L +D
Sbjct: 179 LM-KQQISVNAIAPGPM-DTSFFYGQETKESTAFHKSQAMGNQLTKIEDIAPIIKFLTTD 236
Query: 247 AG 248
Sbjct: 237 GW 238
|
| >3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} Length = 279 | Back alignment and structure |
|---|
Score = 176 bits (450), Expect = 5e-55
Identities = 61/242 (25%), Positives = 103/242 (42%), Gaps = 16/242 (6%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
LKGKVA +TG GIG+ ++ + GA +AI A + G+ + + +
Sbjct: 32 LKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCN 91
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAA--AGNFLVPAEDLSPNGFRTVIEIDSVGTFIM 127
+ + + FG +D+ V A + + + + +I +D G +
Sbjct: 92 ISDPKSVEETISQQEKDFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYC 151
Query: 128 CHEALKYLKKGGRGQASSSSGGIIINIS--ATLHYTATWYQIHVSAAKAAVDSITRSLAL 185
H K KK G+G +I S + Q + AKAA + +SLA+
Sbjct: 152 SHNIGKIFKKNGKGS--------LIITSSISGKIVNIPQLQAPYNTAKAACTHLAKSLAI 203
Query: 186 EWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245
EW RVN I+PG I DT ++ A +++++K + G ++ LYLAS
Sbjct: 204 EWAPF--ARVNTISPGYI-DTD-ITDFASKDMKAKWWQLTPLGREGLTQELVGGYLYLAS 259
Query: 246 DA 247
+A
Sbjct: 260 NA 261
|
| >1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 297 | Back alignment and structure |
|---|
Score = 177 bits (450), Expect = 8e-55
Identities = 62/251 (24%), Positives = 108/251 (43%), Gaps = 25/251 (9%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPA---IGL 66
GK ++TG +GIG ++ K GA + I GR + L + G+PA +
Sbjct: 24 FSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAV 83
Query: 67 EGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF--LVPAEDLSPNGFRTVIEIDSVGT 124
DV + ++ +T+ FGK+DILVN A N D ++ +++
Sbjct: 84 VADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAV 143
Query: 125 FIMCHEALKYLKKGGRGQASSSSGGIIINI-SATLHYTATWYQIHVSAAKAAVDSITRSL 183
M + ++L K + G I+N+ S A + + AKAA+D TR
Sbjct: 144 IEMTQKTKEHLIK---------TKGEIVNVSSIVAGPQAHSGYPYYACAKAALDQYTRCT 194
Query: 184 ALEWGTDYAIRVNGIAPGPIKDTAGVSKLA-PEEIRSKATDYMAAYK-------FGEKWD 235
A++ + +RVN ++PG + T + + PE K ++ + K G+ +
Sbjct: 195 AIDLI-QHGVRVNSVSPGAV-ATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPEE 252
Query: 236 IAMAALYLASD 246
IA ++LA
Sbjct: 253 IANIIVFLADR 263
|
| >1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 Length = 267 | Back alignment and structure |
|---|
Score = 176 bits (448), Expect = 9e-55
Identities = 80/250 (32%), Positives = 122/250 (48%), Gaps = 16/250 (6%)
Query: 1 MESPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALH-SL 59
M+ F L+G+VAL+TGG G+GF I+ L + G ++ + R A L
Sbjct: 13 MKEVFD---LRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKY 69
Query: 60 GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEI 119
G+ + DV E+ +++E+ FGKLD +VNAA N PAE+ + FR VIE+
Sbjct: 70 GVETMAFRCDVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEV 129
Query: 120 DSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHV-SAAKAAVDS 178
+ GT+ +C EA L++ IINI + T I +A+K V S
Sbjct: 130 NLFGTYYVCREAFSLLRESDNPS--------IINIGSLTVEEVTMPNISAYAASKGGVAS 181
Query: 179 ITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKA-TDYMAAYKFGEKWDIA 237
+T++LA EWG Y IRVN IAPG + T + + + + + G D+
Sbjct: 182 LTKALAKEWGR-YGIRVNVIAPGWYR-TKMTEAVFSDPEKLDYMLKRIPLGRTGVPEDLK 239
Query: 238 MAALYLASDA 247
A++LAS+
Sbjct: 240 GVAVFLASEE 249
|
| >3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} Length = 274 | Back alignment and structure |
|---|
Score = 175 bits (446), Expect = 2e-54
Identities = 56/247 (22%), Positives = 104/247 (42%), Gaps = 28/247 (11%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT-------VLRSAVAALHSLGIP 62
L GK +TG GIG I+L+ + GA +AI + + SA AA+++ G
Sbjct: 4 LSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQ 63
Query: 63 AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV 122
+ L+ D+R+ + V +T++ FG +DILVN A+ +L D F + ++++
Sbjct: 64 GLALKCDIREEDQVRAAVAATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNAR 123
Query: 123 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHV--SAAKAAVDSIT 180
G+F+ L +L + I+ ++ W+ H + AK + +T
Sbjct: 124 GSFVCAQACLPHLLQAP--------NPHILTLAPPPSLNPAWWGAHTGYTLAKMGMSLVT 175
Query: 181 RSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAA 240
LA E+G + +N + P + T ++ L + +A AA
Sbjct: 176 LGLAAEFG-PQGVAINALWPRTVIATDAINMLPGVDAA----------ACRRPEIMADAA 224
Query: 241 LYLASDA 247
+ +
Sbjct: 225 HAVLTRE 231
|
| >3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* Length = 258 | Back alignment and structure |
|---|
Score = 175 bits (445), Expect = 2e-54
Identities = 61/242 (25%), Positives = 105/242 (43%), Gaps = 12/242 (4%)
Query: 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR-KTVLRSAVAALHSLGIPAIGLE 67
+ + K AL+TG G+G +++L ++G I I R K + LG+ + ++
Sbjct: 1 MEQNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVK 60
Query: 68 GDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIM 127
+V + + + FG+LD+ VN AA L P +L + + I++
Sbjct: 61 ANVGQPAKIKEMFQQIDETFGRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFC 120
Query: 128 CHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEW 187
EA K ++K G GG I++IS+ V +KAA++++TR LA+E
Sbjct: 121 AQEAAKLMEKNG--------GGHIVSISSLGSIRYLENYTTVGVSKAALEALTRYLAVEL 172
Query: 188 GTDYAIRVNGIAPGPIKDTAGVSKL-APEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246
I VN ++ G I DT + E++ A A + E D+ +L S
Sbjct: 173 S-PKQIIVNAVSGGAI-DTDALKHFPNREDLLEDARQNTPAGRMVEIKDMVDTVEFLVSS 230
Query: 247 AG 248
Sbjct: 231 KA 232
|
| >3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* Length = 244 | Back alignment and structure |
|---|
Score = 173 bits (442), Expect = 4e-54
Identities = 59/239 (24%), Positives = 93/239 (38%), Gaps = 18/239 (7%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L G+ L+TG G GIG L GA + + R + L S V + D
Sbjct: 5 LAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPG----IEPVCVD 60
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
+ E E + G +D+LVN AA L P +++ F E++ +
Sbjct: 61 LGDWEA----TERALGSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQ 116
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
+ L G G I+N+S+ A + K A+D +T+ +ALE G
Sbjct: 117 IVARGLIARGV-------PGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVMALELG- 168
Query: 190 DYAIRVNGIAPGPIKDTAGVSKL-APEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247
+ IRVN + P + T+ + + + KF E + A L+L SD
Sbjct: 169 PHKIRVNAVNPTVV-MTSMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNAILFLLSDR 226
|
| >3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} Length = 285 | Back alignment and structure |
|---|
Score = 174 bits (444), Expect = 5e-54
Identities = 53/247 (21%), Positives = 93/247 (37%), Gaps = 25/247 (10%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT-------VLRSAVAALHSLGIP 62
L+GK ++GG GIG I+ ++ GA +A++ + + +A + G
Sbjct: 7 LRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQ 66
Query: 63 AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV 122
A+ + GD+R + V T+ FG +DI VN A+ L E++ F + I
Sbjct: 67 ALPIVGDIRDGDAVAAAVAKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVR 126
Query: 123 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHV-SAAKAAVDSITR 181
GT+ + + ++K I+ +S + W + AK +
Sbjct: 127 GTYAVSQSCIPHMKGRD--------NPHILTLSPPIRLEPKWLRPTPYMMAKYGMTLCAL 178
Query: 182 SLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAAL 241
+A E D I N + P TA V L + A + + A AA
Sbjct: 179 GIAEELR-DAGIASNTLWPRTTVATAAVQNLLGGDE--------AMARSRKPEVYADAAY 229
Query: 242 YLASDAG 248
+ +
Sbjct: 230 VVLNKPS 236
|
| >4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} Length = 281 | Back alignment and structure |
|---|
Score = 174 bits (443), Expect = 6e-54
Identities = 61/239 (25%), Positives = 106/239 (44%), Gaps = 12/239 (5%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALH-SLGIPAIGLEG 68
+G++AL+TGGG+G+G I+ L G ++ I GRR VL +A + G +
Sbjct: 31 GEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVC 90
Query: 69 DVRKREDAVRVVESTINHFGKLDILV-NAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIM 127
DV + + + F +LD+LV NA + VP E+++ + ++ + G F+
Sbjct: 91 DVGDPDQVAALFAAVRAEFARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLC 150
Query: 128 CHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEW 187
A + +K GG IIN + T +A K A+ +T+S AL+
Sbjct: 151 TQHAFRMMKAQTPR------GGRIINNGSISAQTPRPNSAPYTATKHAITGLTKSTALDG 204
Query: 188 GTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246
+ I I G T ++++ +++ +AA IA A +Y+AS
Sbjct: 205 R-MHDIACGQIDIGNA-ATDMTARMSTGVLQANGE--VAAEPTIPIEHIAEAVVYMASL 259
|
| >3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} Length = 261 | Back alignment and structure |
|---|
Score = 173 bits (442), Expect = 6e-54
Identities = 71/242 (29%), Positives = 117/242 (48%), Gaps = 13/242 (5%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L+GKVAL+TG GSG G ++ + K GA + I+ R K +G A+ + D
Sbjct: 7 LEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGE---IGDAALAVAAD 63
Query: 70 VRKREDAVRVVESTINHFGKLDILV-NAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
+ K D VE+ ++ FGK+DILV NA G+ AE + P F ++ ++ G ++M
Sbjct: 64 ISKEADVDAAVEAALSKFGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMT 123
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
+ + + K+ G +I+N+++T +A K V S+T++LA+E
Sbjct: 124 SKLIPHFKENGAK----GQECVILNVASTGAGRPRPNLAWYNATKGWVVSVTKALAIELA 179
Query: 189 TDYAIRVNGIAPGPIKDTAGVSKLA---PEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245
IRV + P +T ++ EEIR K D + + + D+A AA +L S
Sbjct: 180 -PAKIRVVALNPVAG-ETPLLTTFMGEDSEEIRKKFRDSIPMGRLLKPDDLAEAAAFLCS 237
Query: 246 DA 247
Sbjct: 238 PQ 239
|
| >3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} Length = 256 | Back alignment and structure |
|---|
Score = 173 bits (440), Expect = 8e-54
Identities = 74/238 (31%), Positives = 117/238 (49%), Gaps = 11/238 (4%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L VA++TG +GIG I+ K GA++ + + + AA+ G AIGLE +
Sbjct: 10 LNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECN 69
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
V + V+++ ++ FGK+ +LVN A G P D+ + F +++ F +
Sbjct: 70 VTDEQHREAVIKAALDQFGKITVLVNNAGGGGPKPF-DMPMSDFEWAFKLNLFSLFRLSQ 128
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
A +++K G GG I+NIS+ ++KAAV+ +TR++A + G
Sbjct: 129 LAAPHMQKAG--------GGAILNISSMAGENTNVRMASYGSSKAAVNHLTRNIAFDVGP 180
Query: 190 DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247
IRVN IAPG I T ++ + EI + + GE DIA AAL+L S A
Sbjct: 181 -MGIRVNAIAPGAI-KTDALATVLTPEIERAMLKHTPLGRLGEAQDIANAALFLCSPA 236
|
| >3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} Length = 283 | Back alignment and structure |
|---|
Score = 173 bits (442), Expect = 1e-53
Identities = 74/249 (29%), Positives = 101/249 (40%), Gaps = 21/249 (8%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
VAL+TG GSGIG +L L G + +GR +T + + G AI LE D
Sbjct: 26 QPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEAD 85
Query: 70 VRKREDAVRVVESTINHFGKLDILV-NAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
V V + FG LDI+V NA P +DL P + I ++ GTF+
Sbjct: 86 VSDELQMRNAVRDLVLKFGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTL 145
Query: 129 HEALKYLKKGGRGQASSSSGGIIINIS--ATLHYTATWYQIHVSAAKAAVDSITRSLALE 186
H + YLK+ G GG I+ +S T +A KAA +I + LALE
Sbjct: 146 HLTVPYLKQRG--------GGAIVVVSSINGTRTFTTPGATAYTATKAAQVAIVQQLALE 197
Query: 187 WGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK--------FGEKWDIAM 238
G + IRVN + PG I +T A G D+A
Sbjct: 198 LG-KHHIRVNAVCPGAI-ETNISDNTKLRHEEETAIPVEWPKGQVPITDGQPGRSEDVAE 255
Query: 239 AALYLASDA 247
+L S+
Sbjct: 256 LIRFLVSER 264
|
| >1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 Length = 270 | Back alignment and structure |
|---|
Score = 173 bits (440), Expect = 1e-53
Identities = 75/244 (30%), Positives = 118/244 (48%), Gaps = 21/244 (8%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
GKV ++TGGG GIG I GA + I + ++ R+ L A+ + D
Sbjct: 7 YAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPG----AVFILCD 62
Query: 70 VRKREDAVRVVESTINHFGKLDILVN-AAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
V + +D +V TI FG+LD +VN A E+ S GFR ++E++ +GT+ +
Sbjct: 63 VTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLT 122
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
AL YL+K G +INIS+ + + A K AV ++T++LAL+
Sbjct: 123 KLALPYLRKS---------QGNVINISSLVGAIGQAQAVPYVATKGAVTAMTKALALDES 173
Query: 189 TDYAIRVNGIAPGPIKDTAGVSKLA-----PEEIRSKATDYMAAYKFGEKWDIAMAALYL 243
Y +RVN I+PG I T +LA P + + G+ ++ AA++L
Sbjct: 174 -PYGVRVNCISPGNI-WTPLWEELAALMPDPRASIREGMLAQPLGRMGQPAEVGAAAVFL 231
Query: 244 ASDA 247
AS+A
Sbjct: 232 ASEA 235
|
| >2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* Length = 254 | Back alignment and structure |
|---|
Score = 172 bits (439), Expect = 1e-53
Identities = 70/241 (29%), Positives = 98/241 (40%), Gaps = 16/241 (6%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L G A +TG GSGIG EI GA + ++ R L A L A + D
Sbjct: 9 LDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQEL--GAAVAARIVAD 66
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
V E + ILVN+A L A + +R V+ ++ G F
Sbjct: 67 VTDAEAMTAAAA-EAEAVAPVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASR 125
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVS--AAKAAVDSITRSLALEW 187
+ + G G I+N+ + Q S A+K AV +TR+LA EW
Sbjct: 126 AFGRAMVARGAGA--------IVNLGSMSGTIVNRPQFASSYMASKGAVHQLTRALAAEW 177
Query: 188 GTDYAIRVNGIAPGPIKDTAGVSKL-APEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246
+RVN +APG + T K+ E+ D + GE +IA AAL+LAS
Sbjct: 178 A-GRGVRVNALAPGYV-ATEMTLKMRERPELFETWLDMTPMGRCGEPSEIAAAALFLASP 235
Query: 247 A 247
A
Sbjct: 236 A 236
|
| >3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* Length = 265 | Back alignment and structure |
|---|
Score = 172 bits (439), Expect = 2e-53
Identities = 59/252 (23%), Positives = 95/252 (37%), Gaps = 25/252 (9%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAAL--HSLGIPAIGLE 67
L VA++TGG SGIG L + GAA+A R LR+A +AL G
Sbjct: 6 LSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASV 65
Query: 68 GDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIM 127
DV E+ G ILVN A + + + + +++
Sbjct: 66 CDVLDALQVRAFAEACERTLGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHP 125
Query: 128 CHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEW 187
L L+ I+ +++ L + + SAA+A V ++ RS+A E+
Sbjct: 126 VRAFLPQLESRA--------DAAIVCVNSLLASQPEPHMVATSAARAGVKNLVRSMAFEF 177
Query: 188 GTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK------------FGEKWD 235
+RVNGI G + ++ + E + D+ G+ +
Sbjct: 178 APK-GVRVNGILIGLV-ESGQWRRR-FEAREERELDWAQWTAQLARNKQIPLGRLGKPIE 234
Query: 236 IAMAALYLASDA 247
A A L+LAS
Sbjct: 235 AARAILFLASPL 246
|
| >3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} Length = 280 | Back alignment and structure |
|---|
Score = 173 bits (440), Expect = 2e-53
Identities = 70/243 (28%), Positives = 105/243 (43%), Gaps = 15/243 (6%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L+GK+A++TG SGIG +L + GA + + R L + G A L GD
Sbjct: 6 LEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGD 65
Query: 70 VRKREDAVRVVESTINHFGKLDILV-NAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
V +VE + FG LD NA A + LS G+R ++ + F+
Sbjct: 66 VGDEALHEALVELAVRRFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAA 125
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHV-SAAKAAVDSITRSLALEW 187
+ + G GG + S+ + +TA + + +A+KA + + ++LA+E
Sbjct: 126 KYQVPAIAALG--------GGSLTFTSSFVGHTAGFAGVAPYAASKAGLIGLVQALAVEL 177
Query: 188 GTDYAIRVNGIAPGPIKDTAGVSKL---APEEIRSKATDYMAAYKFGEKWDIAMAALYLA 244
G IRVN + PG DT A E R A + +IA AALYLA
Sbjct: 178 GAR-GIRVNALLPGGT-DTPANFANLPGAAPETRGFVEGLHALKRIARPEEIAEAALYLA 235
Query: 245 SDA 247
SD
Sbjct: 236 SDG 238
|
| >4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A Length = 259 | Back alignment and structure |
|---|
Score = 171 bits (437), Expect = 3e-53
Identities = 69/247 (27%), Positives = 106/247 (42%), Gaps = 20/247 (8%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L+GK AL+TG GIG + + GA +AI R A A + G A ++ D
Sbjct: 6 LEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEI---GPAAYAVQMD 62
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
V +++ + +T+ H G LDILVN AA L P +++ + + I+ GT
Sbjct: 63 VTRQDSIDAAIAATVEHAGGLDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQ 122
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
A + + GR GG IIN+++ A KAAV S+T+S L+
Sbjct: 123 AAARQMIAQGR-------GGKIINMASQAGRRGEALVAIYCATKAAVISLTQSAGLDLI- 174
Query: 190 DYAIRVNGIAPGPIK---------DTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAA 240
+ I VN IAPG + A E + + + + G D+ A
Sbjct: 175 KHRINVNAIAPGVVDGEHWDGVDALFARYENRPRGEKKRLVGEAVPFGRMGTAEDLTGMA 234
Query: 241 LYLASDA 247
++LAS
Sbjct: 235 IFLASAE 241
|
| >3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* Length = 263 | Back alignment and structure |
|---|
Score = 171 bits (437), Expect = 3e-53
Identities = 67/250 (26%), Positives = 106/250 (42%), Gaps = 22/250 (8%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHS-LGIPAIGLEG 68
+ GKVA++TG SGIG I+ K GA I ++ R+ L A +L G+ + +
Sbjct: 5 ISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAV 64
Query: 69 DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
DV E VVES + FG DILVN A + + ++ E+ + +
Sbjct: 65 DVATPEGVDAVVESVRSSFGGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLA 124
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
+ ++ G GG II+ ++ WY+ + KAA+ +++LA E
Sbjct: 125 RGLVPGMRARG--------GGAIIHNASICAVQPLWYEPIYNVTKAALMMFSKTLATEVI 176
Query: 189 TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK-----------FGEKWDIA 237
D IRVN I PG I T K A E + D+ + F ++A
Sbjct: 177 KD-NIRVNCINPGLI-LTPDWIKTAKELTKDNGGDWKGYLQSVADEHAPIKRFASPEELA 234
Query: 238 MAALYLASDA 247
++L S+
Sbjct: 235 NFFVFLCSER 244
|
| >3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} Length = 273 | Back alignment and structure |
|---|
Score = 171 bits (437), Expect = 4e-53
Identities = 69/248 (27%), Positives = 116/248 (46%), Gaps = 16/248 (6%)
Query: 1 MESPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG 60
M PF L G+ A++TG GSGIG I+ + GA + GR ++ + G
Sbjct: 23 MTGPFS---LAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDG-VKEVADEIADGG 78
Query: 61 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID 120
A + D+ E A V E + ++D+LVN A PAE++S +R V+ ++
Sbjct: 79 GSAEAVVADLADLEGAANVAE-ELAATRRVDVLVNNAGIIARAPAEEVSLGRWREVLTVN 137
Query: 121 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSIT 180
+++ + G G+ I+ I++ L + +A+K AV +T
Sbjct: 138 LDAAWVLSRSFGTAMLAHGSGR--------IVTIASMLSFQGGRNVAAYAASKHAVVGLT 189
Query: 181 RSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKA-TDYMAAYKFGEKWDIAMA 239
R+LA EW + VN +APG + TA + L ++ R+ T + A ++ D+
Sbjct: 190 RALASEWAG-RGVGVNALAPGYV-VTANTAALRADDERAAEITARIPAGRWATPEDMVGP 247
Query: 240 ALYLASDA 247
A++LASDA
Sbjct: 248 AVFLASDA 255
|
| >1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* Length = 261 | Back alignment and structure |
|---|
Score = 171 bits (436), Expect = 4e-53
Identities = 70/240 (29%), Positives = 120/240 (50%), Gaps = 11/240 (4%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR-KTVLRSAVAALHSLGIPAIGLEG 68
L+GKV ++TG +G+G ++++ A + + R + S + + +G AI ++G
Sbjct: 5 LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKG 64
Query: 69 DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
DV D + +V+S I FGKLD+++N A V + ++S + + VI+ + G F+
Sbjct: 65 DVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGS 124
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
EA+KY + G +IN+S+ +H +A+K + +T +LALE+
Sbjct: 125 REAIKYFVENDI-------KGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYA 177
Query: 189 TDYAIRVNGIAPGPIKDTAGVSKL-APEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247
IRVN I PG I +T ++ A E R+ + GE +IA A +LAS
Sbjct: 178 P-KGIRVNNIGPGAI-NTPINAEKFADPEQRADVESMIPMGYIGEPEEIAAVAAWLASSE 235
|
| >3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} Length = 271 | Back alignment and structure |
|---|
Score = 171 bits (436), Expect = 5e-53
Identities = 69/240 (28%), Positives = 116/240 (48%), Gaps = 15/240 (6%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L+ KVA++TG GIG E S L + GA + + +T L A A+ +G A+ D
Sbjct: 9 LENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAAS---VGRGAVHHVVD 65
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAA--AGNFLVPAEDLSPNGFRTVIEIDSVGTFIM 127
+ +++ TI+ FG+LDI+ N A + + ++ + + +++ GT +M
Sbjct: 66 LTNEVSVRALIDFTIDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLM 125
Query: 128 CHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEW 187
C A+ L G GG I+NIS+ + A + KAA++++TR +A ++
Sbjct: 126 CKYAIPRLISAG--------GGAIVNISSATAHAAYDMSTAYACTKAAIETLTRYVATQY 177
Query: 188 GTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247
G +R N IAPG + T + P+ I + A + GE +IA +LASD
Sbjct: 178 GRH-GVRCNAIAPGLV-RTPRLEVGLPQPIVDIFATHHLAGRIGEPHEIAELVCFLASDR 235
|
| >3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} Length = 259 | Back alignment and structure |
|---|
Score = 171 bits (435), Expect = 5e-53
Identities = 53/242 (21%), Positives = 97/242 (40%), Gaps = 16/242 (6%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR-KTVLRSAVAALHSLGIPAIGLEG 68
+ ++ G G IG +++ + GA + + +AVA + LG A+ ++
Sbjct: 6 FTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKA 65
Query: 69 DVRKREDAVRVVESTINHFGKLDILVN-AAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIM 127
D+ + + + + FG++ LV+ A ++ + V++++ F+
Sbjct: 66 DLTNAAEVEAAISAAADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLT 125
Query: 128 CHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY-QIHVSAAKAAVDSITRSLALE 186
AL + KGG I+ S+ + + +K AV + TR LA E
Sbjct: 126 AKTALPKMAKGGA----------IVTFSSQAGRDGGGPGALAYATSKGAVMTFTRGLAKE 175
Query: 187 WGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246
G IRVN + PG I T E+R + + + G D+A +LASD
Sbjct: 176 VGPK--IRVNAVCPGMI-STTFHDTFTKPEVRERVAGATSLKREGSSEDVAGLVAFLASD 232
Query: 247 AG 248
Sbjct: 233 DA 234
|
| >1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 Length = 244 | Back alignment and structure |
|---|
Score = 170 bits (434), Expect = 6e-53
Identities = 58/239 (24%), Positives = 98/239 (41%), Gaps = 18/239 (7%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
G AL+TG G GIG + L GA + + R + L S + D
Sbjct: 5 FSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPG----IEPVCVD 60
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
+ + E + G +D+LVN AA + P +++ F ++ F +
Sbjct: 61 LGDWDA----TEKALGGIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQ 116
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
+ + G G I+N+S+ + + I S+ K A+ +T+++A+E G
Sbjct: 117 MVARDMINRGV-------PGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKAMAMELG- 168
Query: 190 DYAIRVNGIAPGPIKDTAGVSKL-APEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247
+ IRVN + P + T K+ A E K + KF E D+ + L+L SD
Sbjct: 169 PHKIRVNSVNPTVV-LTDMGKKVSADPEFARKLKERHPLRKFAEVEDVVNSILFLLSDR 226
|
| >3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} Length = 266 | Back alignment and structure |
|---|
Score = 170 bits (433), Expect = 1e-52
Identities = 65/242 (26%), Positives = 109/242 (45%), Gaps = 11/242 (4%)
Query: 8 DILKGKVALLTGG-GSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIP-AIG 65
+LKGKV L+T G+GIG + + GA + I + L L LG+
Sbjct: 18 GLLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEA 77
Query: 66 LEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTF 125
+ DV E ++ T+ G+LD+LVN A P D++ + V+ +
Sbjct: 78 VVCDVTSTEAVDALITQTVEKAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVM 137
Query: 126 IMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLAL 185
AL+Y + GG+I+N ++ L + A Q H +AAKA V ++TR A+
Sbjct: 138 RATRAALRYFRGVDH-------GGVIVNNASVLGWRAQHSQSHYAAAKAGVMALTRCSAI 190
Query: 186 EWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245
E ++ +R+N ++P + K + E+ + A + E W++A +LAS
Sbjct: 191 EAV-EFGVRINAVSPSIA-RHKFLEKTSSSELLDRLASDEAFGRAAEPWEVAATIAFLAS 248
Query: 246 DA 247
D
Sbjct: 249 DY 250
|
| >4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} Length = 254 | Back alignment and structure |
|---|
Score = 169 bits (432), Expect = 1e-52
Identities = 61/241 (25%), Positives = 109/241 (45%), Gaps = 12/241 (4%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
LK KV ++TG GSGIG I+ + + + + + + L V L +G +G++ D
Sbjct: 5 LKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKAD 64
Query: 70 VRKREDAVRVVESTINHFGKLDILV-NAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
V K++D V T + ++D+L NA + + P ++S + V+ ++ F
Sbjct: 65 VSKKKDVEEFVRRTFETYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSS 124
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
+ + K G G+I+N ++ + + AK + +TRS+A +G
Sbjct: 125 RAVIPIMLKQG--------KGVIVNTASIAGIRGGFAGAPYTVAKHGLIGLTRSIAAHYG 176
Query: 189 TDYAIRVNGIAPGPIKD--TAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246
D IR + PG +K G SK + +R+ + + E DIA ++LASD
Sbjct: 177 -DQGIRAVAVLPGTVKTNIGLGSSKPSELGMRTLTKLMSLSSRLAEPEDIANVIVFLASD 235
Query: 247 A 247
Sbjct: 236 E 236
|
| >1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 Length = 265 | Back alignment and structure |
|---|
Score = 170 bits (433), Expect = 1e-52
Identities = 51/246 (20%), Positives = 99/246 (40%), Gaps = 18/246 (7%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHS-LGIPAIGLEG 68
K ++TGG GIG + + GA +A++ R + G+ +
Sbjct: 12 FVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQC 71
Query: 69 DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
DV + + ++ G + L+ A + + PA +L+ F V +++ G F C
Sbjct: 72 DVSNTDIVTKTIQQIDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTC 131
Query: 129 HEALKYLKKGGRGQASSSSGGIIINIS-------ATLHYTATWYQIHVSAAKAAVDSITR 181
K + + G I+ S + Q+ +++KAA ++ +
Sbjct: 132 RAVAKLWLQKQQ-------KGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVK 184
Query: 182 SLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAAL 241
LA EW IRVN ++PG + +T + + ++IR + +F + ++ A+
Sbjct: 185 GLAAEWA-SAGIRVNALSPGYV-NTDQTAHM-DKKIRDHQASNIPLNRFAQPEEMTGQAI 241
Query: 242 YLASDA 247
L SD
Sbjct: 242 LLLSDH 247
|
| >4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} Length = 277 | Back alignment and structure |
|---|
Score = 170 bits (433), Expect = 2e-52
Identities = 67/243 (27%), Positives = 115/243 (47%), Gaps = 18/243 (7%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L +V ++TGGGSGIG + K+GA + + + + G A G+ D
Sbjct: 25 LNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEI---GSKAFGVRVD 81
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
V +DA +VE T +G++D+LVN A + + ++ ++ G F+
Sbjct: 82 VSSAKDAESMVEKTTAKWGRVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSK 141
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
+ +++ G GG IIN ++ +A + A+K A+ S+TR++A++
Sbjct: 142 YVIPVMRRNG--------GGSIINTTSYTATSAIADRTAYVASKGAISSLTRAMAMDHAK 193
Query: 190 DYAIRVNGIAPGPIKDTAGVSKLA-----PEEIRSKATDYMAAYKFGEKWDIAMAALYLA 244
+ IRVN +APG I D+ +K+ P ++RS + G +IA A L+LA
Sbjct: 194 E-GIRVNAVAPGTI-DSPYFTKIFAEAKDPAKLRSDFNARAVMDRMGTAEEIAEAMLFLA 251
Query: 245 SDA 247
SD
Sbjct: 252 SDR 254
|
| >1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 Length = 253 | Back alignment and structure |
|---|
Score = 169 bits (431), Expect = 2e-52
Identities = 70/243 (28%), Positives = 108/243 (44%), Gaps = 18/243 (7%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L+GKVAL+TGG SG+G E+ L GA +A + + A L G ++ + D
Sbjct: 4 LQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL---GERSMFVRHD 60
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
V D V+ + G L++LVN A E F +++I++ FI C
Sbjct: 61 VSSEADWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQ 120
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
+ + +K+ GG IIN+++ + SA+KAAV ++TR+ AL
Sbjct: 121 QGIAAMKET---------GGSIINMASVSSWLPIEQYAGYSASKAAVSALTRAAALSCRK 171
Query: 190 D-YAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAY----KFGEKWDIAMAALYLA 244
YAIRVN I P I T + P+ + + + + IA L+LA
Sbjct: 172 QGYAIRVNSIHPDGI-YTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPERIAQLVLFLA 230
Query: 245 SDA 247
SD
Sbjct: 231 SDE 233
|
| >2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} Length = 276 | Back alignment and structure |
|---|
Score = 169 bits (431), Expect = 3e-52
Identities = 63/251 (25%), Positives = 107/251 (42%), Gaps = 14/251 (5%)
Query: 1 MESPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG 60
M F L G++AL+TGG GIG I+ L + GA + I R L + G
Sbjct: 21 MHPYFS---LAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYG 77
Query: 61 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID 120
+ D+ A R+ ++ +LDILVN A ++ E +G+ V++++
Sbjct: 78 -DCQAIPADLSSEAGARRLAQALGELSARLDILVNNAGTSWGAALESYPVSGWEKVMQLN 136
Query: 121 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHV-SAAKAAVDSI 179
F + L L++ + + +INI + +A Q + +KAA+ +
Sbjct: 137 VTSVFSCIQQLLPLLRRSASAE----NPARVINIGSVAGISAMGEQAYAYGPSKAALHQL 192
Query: 180 TRSLALEWGTDYAIRVNGIAPGPI--KDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIA 237
+R LA E I VN IAPG + T + + + + ++G ++A
Sbjct: 193 SRMLAKELV-GEHINVNVIAPGRFPSRMTRHI--ANDPQALEADSASIPMGRWGRPEEMA 249
Query: 238 MAALYLASDAG 248
A+ LA AG
Sbjct: 250 ALAISLAGTAG 260
|
| >1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 Length = 262 | Back alignment and structure |
|---|
Score = 168 bits (428), Expect = 6e-52
Identities = 60/254 (23%), Positives = 103/254 (40%), Gaps = 26/254 (10%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
GKV L+TG G IG +L+L + G AIA++ + L A A++ G+ A D
Sbjct: 5 FNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCD 64
Query: 70 VRKREDAVRVVESTINHFGKLDILV-NAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
V E + V+S + FGK+D L NA P +D + F V+ I+ G F +
Sbjct: 65 VTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVL 124
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
+ + G I+N ++ +K A+ ++T + AL+
Sbjct: 125 KAVSRQMITQN--------YGRIVNTASMAGVKGPPNMAAYGTSKGAIIALTETAALDLA 176
Query: 189 TDYAIRVNGIAPGPIKDTAGVSKLA---------------PEEIRSKATDYMAAYKFGEK 233
Y IRVN I+PG + + + P+ + + + ++G+
Sbjct: 177 -PYNIRVNAISPGYM-GPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDI 234
Query: 234 WDIAMAALYLASDA 247
+I +L D
Sbjct: 235 NEIPGVVAFLLGDD 248
|
| >3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} Length = 253 | Back alignment and structure |
|---|
Score = 168 bits (427), Expect = 8e-52
Identities = 66/241 (27%), Positives = 104/241 (43%), Gaps = 16/241 (6%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
+ KV ++TG G GIG + L + GAA+ + + + + G AI + D
Sbjct: 7 FENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVD 66
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLV---PAEDLSPNGFRTVIEIDSVGTFI 126
V E A + + T+ FG +D LVN AA + + P ++ + ++ G
Sbjct: 67 VSDPESAKAMADRTLAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALW 126
Query: 127 MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALE 186
K + K G GG I+N S+T A Y + AK ++ +T+ L+ E
Sbjct: 127 CTRAVYKKMTKRG--------GGAIVNQSST---AAWLYSNYYGLAKVGINGLTQQLSRE 175
Query: 187 WGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246
G IR+N IAPGPI DT P+E+ + + G D+ L+L SD
Sbjct: 176 LGG-RNIRINAIAPGPI-DTEANRTTTPKEMVDDIVKGLPLSRMGTPDDLVGMCLFLLSD 233
Query: 247 A 247
Sbjct: 234 E 234
|
| >4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} Length = 272 | Back alignment and structure |
|---|
Score = 168 bits (428), Expect = 9e-52
Identities = 61/238 (25%), Positives = 109/238 (45%), Gaps = 14/238 (5%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
K+A++TG GSG+G +++ L G +A+ GRR L+ A +G A+ + D
Sbjct: 26 TGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAE---IGDDALCVPTD 82
Query: 70 VRKREDAVRVVESTINHFGKLDILV-NAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
V + + +T+ FG++D+L NA G +P EDL+ ++ V++ + G F+
Sbjct: 83 VTDPDSVRALFTATVEKFGRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCT 142
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
EA + +K GG IIN + + Y +A K A+ +T+S +L+
Sbjct: 143 QEAFRVMKAQEPR------GGRIINNGSISATSPRPYSAPYTATKHAITGLTKSTSLDGR 196
Query: 189 TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246
+ I I G DT K+ ++ + + + +A A +Y+AS
Sbjct: 197 -VHDIACGQIDIGNA-DTPMAQKMKAGVPQADLSIKVE--PVMDVAHVASAVVYMASL 250
|
| >2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* Length = 249 | Back alignment and structure |
|---|
Score = 166 bits (423), Expect = 3e-51
Identities = 73/239 (30%), Positives = 113/239 (47%), Gaps = 13/239 (5%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
LK K+A++TGG +GIG I+ + GA IAI A AA+ +LG + ++ D
Sbjct: 5 LKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPA--PEAEAAIRNLGRRVLTVKCD 62
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
V + D + I+ FG+ DILVN A L+P ++L+ ++ EI+ F+M
Sbjct: 63 VSQPGDVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAK 122
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
+ +K+ G G IIN+++T ++ H + KAA TR+LA + G
Sbjct: 123 AFVPGMKRNG--------WGRIINLTSTTYWLKIEAYTHYISTKAANIGFTRALASDLGK 174
Query: 190 DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK-FGEKWDIAMAALYLASDA 247
I VN IAP + TA A + + + A D+ AA +LASD
Sbjct: 175 -DGITVNAIAPSLV-RTATTEASALSAMFDVLPNMLQAIPRLQVPLDLTGAAAFLASDD 231
|
| >3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* Length = 258 | Back alignment and structure |
|---|
Score = 166 bits (423), Expect = 3e-51
Identities = 54/241 (22%), Positives = 107/241 (44%), Gaps = 9/241 (3%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR-KTVLRSAVAALHSLGIPAIGLEG 68
LKGK L+TG GIG + + GA + + GR+ + +A++ + G A
Sbjct: 5 LKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAA 64
Query: 69 DVRKREDAVRVVESTINHFGKLDILV-NAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIM 127
D+ E ++V+ + FG +D+L+ NA P ++ + V++ + +
Sbjct: 65 DLATSEACQQLVDEFVAKFGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMT 124
Query: 128 CHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY-QIHVSAAKAAVDSITRSLALE 186
AL +L + S +I+ + +T AAKA + ++ ++
Sbjct: 125 TKFALPHLAAAAKA---SGQTSAVISTGSIAGHTGGGPGAGLYGAAKAFLHNVHKNWVDF 181
Query: 187 WGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246
D +R N ++PG + DTA + +++R + ++ + +FG ++A A L+ AS
Sbjct: 182 HTKD-GVRFNIVSPGTV-DTAFHADK-TQDVRDRISNGIPMGRFGTAEEMAPAFLFFASH 238
Query: 247 A 247
Sbjct: 239 L 239
|
| >3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} Length = 258 | Back alignment and structure |
|---|
Score = 166 bits (423), Expect = 4e-51
Identities = 51/247 (20%), Positives = 96/247 (38%), Gaps = 19/247 (7%)
Query: 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAI--MGRRKTVLRSAVAALHSLGIPAIGLEGD 69
KVA++TGG GIG IS +L G IA+ + +++ + + + A+ + D
Sbjct: 2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLD 61
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
V + + ++ G D+LVN A + P +++ + + ++ F
Sbjct: 62 VTDKANFDSAIDEAAEKLGGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQ 121
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
A + + G G IIN ++ S K AV +T++ A E
Sbjct: 122 AASRKFDELGV-------KGKIINAASIAAIQGFPILSAYSTTKFAVRGLTQAAAQELAP 174
Query: 190 DYAIRVNGIAPGPIK---------DTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAA 240
VN APG + + + ++ E + + +A + D+A
Sbjct: 175 -KGHTVNAYAPGIVGTGMWEQIDAELSKINGKPIGENFKEYSSSIALGRPSVPEDVAGLV 233
Query: 241 LYLASDA 247
+LAS+
Sbjct: 234 SFLASEN 240
|
| >3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} Length = 267 | Back alignment and structure |
|---|
Score = 165 bits (421), Expect = 8e-51
Identities = 67/240 (27%), Positives = 100/240 (41%), Gaps = 13/240 (5%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIM-GRRKTVLRSAVAALHSLGIPAIGLEG 68
KVA++TG GIG I+ +L G + I + + + G A+ +
Sbjct: 25 ETNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQA 84
Query: 69 DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
DV R+ + FG +D+LVN A L + F VI ++ GTF
Sbjct: 85 DVSDPAAVRRLFATAEEAFGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTL 144
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
EA + L+ GGR IIN+S + +AAKA V+++T L+ E
Sbjct: 145 REAAQRLRVGGR----------IINMSTSQVGLLHPSYGIYAAAKAGVEAMTHVLSKELR 194
Query: 189 TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAG 248
I VN +APGP T + +E+R + + G DIA A +LA G
Sbjct: 195 G-RDITVNAVAPGPT-ATDLFLEGKSDEVRDRFAKLAPLERLGTPQDIAGAVAFLAGPDG 252
|
| >2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 Length = 256 | Back alignment and structure |
|---|
Score = 165 bits (420), Expect = 1e-50
Identities = 71/243 (29%), Positives = 109/243 (44%), Gaps = 21/243 (8%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
GK L+TGG GIG I+ + GA +A+ R VA I + D
Sbjct: 4 FAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGK--EVAE----AIGGAFFQVD 57
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
+ + VR VE G++D+LVN AA A + +R V+E++ +
Sbjct: 58 LEDERERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSA 117
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
A + ++K G GG I+N+++ A +A+K + ++TRSLAL+
Sbjct: 118 LAAREMRKVG--------GGAIVNVASVQGLFAEQENAAYNASKGGLVNLTRSLALDLA- 168
Query: 190 DYAIRVNGIAPGPIKDTAGVSKLA-----PEEIRSKATDYMAAYKFGEKWDIAMAALYLA 244
IRVN +APG I T V + PE R D A + G+ ++A A L+LA
Sbjct: 169 PLRIRVNAVAPGAI-ATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFLA 227
Query: 245 SDA 247
S+
Sbjct: 228 SEK 230
|
| >2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} Length = 250 | Back alignment and structure |
|---|
Score = 164 bits (419), Expect = 1e-50
Identities = 55/241 (22%), Positives = 100/241 (41%), Gaps = 15/241 (6%)
Query: 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAAL-HSLGIPAIGLEGDV 70
+VA++TG SG G I+ + G +A + L H+ + + DV
Sbjct: 2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADV 61
Query: 71 RKREDAVRVVESTINHFGKLDILVNAA---AGNFLVPAEDLSPNGFRTVIEIDSVGTFIM 127
D + +T+ FG +D+LVN A + F V+ ++ G F+
Sbjct: 62 ADEGDVNAAIAATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLG 121
Query: 128 CHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEW 187
C L ++ G G+I+NI++ A + + +K AV +T+S+A+++
Sbjct: 122 CRAVLPHMLLQG--------AGVIVNIASVASLVAFPGRSAYTTSKGAVLQLTKSVAVDY 173
Query: 188 GTDYAIRVNGIAPGPIKDTAGVSKL-APEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246
IR N + PG I +T E+R + + + G +A A ++LA +
Sbjct: 174 AGS-GIRCNAVCPGMI-ETPMTQWRLDQPELRDQVLARIPQKEIGTAAQVADAVMFLAGE 231
Query: 247 A 247
Sbjct: 232 D 232
|
| >3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} Length = 263 | Back alignment and structure |
|---|
Score = 165 bits (419), Expect = 1e-50
Identities = 67/247 (27%), Positives = 110/247 (44%), Gaps = 20/247 (8%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L G+ A++TGG GIG I+ L K GA +AI ++ VA L +E D
Sbjct: 10 LSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAG---LENGGFAVEVD 66
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
V KR ++ I+ G D+L A + + PA D++ + ++++ G F+
Sbjct: 67 VTKRASVDAAMQKAIDALGGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQ 126
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
A ++ + G+I+N ++ H SA+K AV T++LA E
Sbjct: 127 IACRHFLASN-------TKGVIVNTASLAAKVGAPLLAHYSASKFAVFGWTQALAREMAP 179
Query: 190 DYAIRVNGIAPGPIK---------DTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAA 240
IRVN + PG +K A + + PE +R++ + E D+A
Sbjct: 180 -KNIRVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVSLTPLGRIEEPEDVADVV 238
Query: 241 LYLASDA 247
++LASDA
Sbjct: 239 VFLASDA 245
|
| >3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* Length = 281 | Back alignment and structure |
|---|
Score = 164 bits (418), Expect = 3e-50
Identities = 57/251 (22%), Positives = 95/251 (37%), Gaps = 27/251 (10%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L G+VAL+TGG SG+G + + GA +A++ + LR A G A+G+ GD
Sbjct: 3 LTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVA---HGGNAVGVVGD 59
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAA-----AGNFLVPAEDLSPNGFRTVIEIDSVGT 124
VR +D R E + FGK+D L+ A + ED F + ++ G
Sbjct: 60 VRSLQDQKRAAERCLAAFGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGY 119
Query: 125 FIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLA 184
L L G ++ + + +A K AV + R +A
Sbjct: 120 IHAVKACLPALVSS---------RGSVVFTISNAGFYPNGGGPLYTATKHAVVGLVRQMA 170
Query: 185 LEWGTDYAIRVNGIAPGPIK----DTAGVSKLAPEEIRSKATDYMAAY----KFGEKWDI 236
E +RVNG+APG + + + D + + + +
Sbjct: 171 FELAPH--VRVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKSVLPIGRMPALEEY 228
Query: 237 AMAALYLASDA 247
A ++ A+
Sbjct: 229 TGAYVFFATRG 239
|
| >1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 Length = 256 | Back alignment and structure |
|---|
Score = 163 bits (416), Expect = 4e-50
Identities = 65/244 (26%), Positives = 101/244 (41%), Gaps = 17/244 (6%)
Query: 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK 72
KVAL+TG G GIG I+L+L K G A+AI ++ + ++ G A+ ++ DV
Sbjct: 3 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSD 62
Query: 73 REDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEAL 132
R+ VE G D++VN A P E ++P V I+ G A+
Sbjct: 63 RDQVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAV 122
Query: 133 KYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYA 192
+ KK G GG IIN + + S++K AV +T++ A +
Sbjct: 123 EAFKKEGH-------GGKIINACSQAGHVGNPELAVYSSSKFAVRGLTQTAARDLAP-LG 174
Query: 193 IRVNGIAPGPIK---------DTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYL 243
I VNG PG +K + + ++ + + E D+A YL
Sbjct: 175 ITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVSYL 234
Query: 244 ASDA 247
AS
Sbjct: 235 ASPD 238
|
| >3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} Length = 247 | Back alignment and structure |
|---|
Score = 163 bits (414), Expect = 5e-50
Identities = 59/244 (24%), Positives = 95/244 (38%), Gaps = 22/244 (9%)
Query: 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPA---I 64
++LKG+V L+TG GIG + HGA++ ++GR + L + S G P I
Sbjct: 10 ELLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLII 69
Query: 65 GLEGDVRKREDAVRVVESTINHFGKLDILV-NAAAGNFLVPAEDLSPNGFRTVIEIDSVG 123
L + + + + FG+LD L+ NA+ P E L F V+ ++
Sbjct: 70 ALNLENATAQQYRELAARVEHEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNA 129
Query: 124 TFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSL 183
TF++ L LK+ I S+++ +K A + + ++L
Sbjct: 130 TFMLTRALLPLLKRSE--------DASIAFTSSSVGRKGRANWGAYGVSKFATEGLMQTL 181
Query: 184 ALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYL 243
A E A+R N I PG T ++ P+E DI LYL
Sbjct: 182 ADELEGVTAVRANSINPGAT-RTGMRAQAYPDEN---------PLNNPAPEDIMPVYLYL 231
Query: 244 ASDA 247
Sbjct: 232 MGPD 235
|
| >3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} Length = 266 | Back alignment and structure |
|---|
Score = 163 bits (414), Expect = 1e-49
Identities = 57/243 (23%), Positives = 100/243 (41%), Gaps = 25/243 (10%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
+GKVAL+TG GIG + L GA +A+ R + +AA + L GD
Sbjct: 26 FEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRA----VAGIAA-------DLHLPGD 74
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
+R+ A + + G+LDI+VN A + + + + ++ F +C
Sbjct: 75 LREAAYADGLPGAVAAGLGRLDIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICR 134
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
A+ + G GG I+N+++ KAA+ S+T+ + ++
Sbjct: 135 AAIPLMAAAG--------GGAIVNVASCWGLRPGPGHALYCLTKAALASLTQCMGMDHAP 186
Query: 190 DYAIRVNGIAPGPI-----KDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLA 244
IR+N + P + + P+ ++ + + E DIA L+LA
Sbjct: 187 Q-GIRINAVCPNEVNTPMLRTGFAKRGFDPDRAVAELGRTVPLGRIAEPEDIADVVLFLA 245
Query: 245 SDA 247
SDA
Sbjct: 246 SDA 248
|
| >3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} PDB: 3gdf_A Length = 267 | Back alignment and structure |
|---|
Score = 162 bits (412), Expect = 2e-49
Identities = 70/244 (28%), Positives = 106/244 (43%), Gaps = 18/244 (7%)
Query: 10 LKGKVALLTG--GGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAA--LHSLGIPAIG 65
LKGKV ++TG G G+G E + + GAA+AI + + GI A
Sbjct: 18 LKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKA 77
Query: 66 LEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTF 125
+ V E ++V+ + FG++D + A D S + V+++D GTF
Sbjct: 78 YKCQVDSYESCEKLVKDVVADFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTF 137
Query: 126 IMCHEALKYLKKGGRGQ--ASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSL 183
+ K+ G G ++S G I N Q + AKA + RSL
Sbjct: 138 HCAKAVGHHFKERGTGSLVITASMSGHIANFPQ--------EQTSYNVAKAGCIHMARSL 189
Query: 184 ALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYL 243
A EW D+ RVN I+PG I DT +S P+E + + + G ++ A +Y
Sbjct: 190 ANEWR-DF-ARVNSISPGYI-DTG-LSDFVPKETQQLWHSMIPMGRDGLAKELKGAYVYF 245
Query: 244 ASDA 247
ASDA
Sbjct: 246 ASDA 249
|
| >3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} Length = 277 | Back alignment and structure |
|---|
Score = 162 bits (413), Expect = 2e-49
Identities = 55/244 (22%), Positives = 92/244 (37%), Gaps = 19/244 (7%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L GKVA++TG G+GIG ++ +L G + +A + G A D
Sbjct: 27 LAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKI---GCGAAACRVD 83
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
V + + +V++ + FG +D LV A L D + F VI I+ G ++
Sbjct: 84 VSDEQQIIAMVDACVAAFGGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTK 143
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
A + + G GG I+N+S+ A +KA + ++R A E
Sbjct: 144 HAAPRMIERG--------GGAIVNLSSLAGQVAVGGTGAYGMSKAGIIQLSRITAAELR- 194
Query: 190 DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK------FGEKWDIAMAALYL 243
IR N + P + DT + + ++A ++L
Sbjct: 195 SSGIRSNTLLPAFV-DTPMQQTAMAMFDGALGAGGARSMIARLQGRMAAPEEMAGIVVFL 253
Query: 244 ASDA 247
SD
Sbjct: 254 LSDD 257
|
| >1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 Length = 267 | Back alignment and structure |
|---|
Score = 161 bits (409), Expect = 5e-49
Identities = 64/248 (25%), Positives = 105/248 (42%), Gaps = 20/248 (8%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIP--AIGLE 67
+V L+TGGGSG+G +++L GA ++++ L ++ AA+ +
Sbjct: 11 FTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTV 70
Query: 68 GDVRKREDAVRVVESTINHFGKLDILV-NAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFI 126
DV V +T FG++D NA P E + F V+ I+ G F+
Sbjct: 71 ADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFL 130
Query: 127 MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALE 186
+ LK +++ G G+++N ++ Q +AAK V +TR+ A+E
Sbjct: 131 GLEKVLKIMREQG--------SGMVVNTASVGGIRGIGNQSGYAAAKHGVVGLTRNSAVE 182
Query: 187 WGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK-------FGEKWDIAMA 239
+G Y IR+N IAPG I T V + + +GE +IA
Sbjct: 183 YG-RYGIRINAIAPGAI-WTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAPEIAAV 240
Query: 240 ALYLASDA 247
+L SD
Sbjct: 241 VAFLLSDD 248
|
| >3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} Length = 346 | Back alignment and structure |
|---|
Score = 163 bits (414), Expect = 5e-49
Identities = 64/248 (25%), Positives = 97/248 (39%), Gaps = 30/248 (12%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT-------VLRSAVAALHSLGIP 62
L G +TG GIG I+L+ K GA I I + + +A + ++G
Sbjct: 43 LAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGK 102
Query: 63 AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV 122
A+ DVR + VE I FG +DILVN A+ L D ++ +++
Sbjct: 103 ALPCIVDVRDEQQISAAVEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTR 162
Query: 123 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHV--SAAKAAVDSIT 180
GT++ + YLKK I+NIS L+ W++ H + AK +
Sbjct: 163 GTYLASKACIPYLKKSK--------VAHILNISPPLNLNPVWFKQHCAYTIAKYGMSMYV 214
Query: 181 RSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDI-AMA 239
+A E+ + I VN + P TA + L I K DI A A
Sbjct: 215 LGMAEEFKGE--IAVNALWPKTAIHTAAMDMLGGPGIE----------SQCRKVDIIADA 262
Query: 240 ALYLASDA 247
A +
Sbjct: 263 AYSIFQKP 270
|
| >1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} Length = 244 | Back alignment and structure |
|---|
Score = 159 bits (405), Expect = 1e-48
Identities = 40/242 (16%), Positives = 77/242 (31%), Gaps = 23/242 (9%)
Query: 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK 72
+AL+T G L + G + G
Sbjct: 2 VIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFE----SENPG--TIALA 55
Query: 73 REDAVRVVESTINHFGKLDILVNAAA---GNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
+ R+V++T+ H +D +V+ +P E S R + E S+ ++
Sbjct: 56 EQKPERLVDATLQHGEAIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQ 115
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
A+ L+ G G +I I++++ Y A+AA ++ S A
Sbjct: 116 SAIAPLRAAG--------GASVIFITSSVGKKPLAYNPLYGPARAATVALVESAAKTLSR 167
Query: 190 DYAIRVNGIAPGPIKDTAGVSKLA----PEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245
I + I P + + E+R + + + G ++ +LAS
Sbjct: 168 -DGILLYAIGPNFF-NNPTYFPTSDWENNPELRERVDRDVPLGRLGRPDEMGALITFLAS 225
Query: 246 DA 247
Sbjct: 226 RR 227
|
| >3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A Length = 252 | Back alignment and structure |
|---|
Score = 159 bits (406), Expect = 1e-48
Identities = 55/251 (21%), Positives = 105/251 (41%), Gaps = 24/251 (9%)
Query: 1 MESPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG 60
M K D+L ++ L+TG GIG E ++ ++GA + ++GR + LR + ++
Sbjct: 1 MHYQPKQDLLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEET 60
Query: 61 IPA---IGLEGDVRKREDAVRVVESTINHFGKLDILV-NAAAGNFLVPAEDLSPNGFRTV 116
L+ E+ ++ + ++ +LD ++ NA + P + +P ++ V
Sbjct: 61 GRQPQWFILDLLTCTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDV 120
Query: 117 IEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAV 176
++++ TF++ L L K G ++ S+++ +A+K A
Sbjct: 121 MQVNVNATFMLTQALLPLLLKSD--------AGSLVFTSSSVGRQGRANWGAYAASKFAT 172
Query: 177 DSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDI 236
+ + + LA E+ +RVN I PG TA + P E K DI
Sbjct: 173 EGMMQVLADEYQQR--LRVNCINPGGT-RTAMRASAFPTED---------PQKLKTPADI 220
Query: 237 AMAALYLASDA 247
L+L D
Sbjct: 221 MPLYLWLMGDD 231
|
| >1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 Length = 274 | Back alignment and structure |
|---|
Score = 160 bits (406), Expect = 2e-48
Identities = 66/252 (26%), Positives = 111/252 (44%), Gaps = 24/252 (9%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAI-MGRRKTVLRSAVAALHSLGIPAIGLEG 68
L GKVAL TG G GIG I+++LG+ GA++ + G VA L LG + ++
Sbjct: 19 LAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQA 78
Query: 69 DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
D+ K + V + + ++HFG LD +++ + +++ F V +++ G F +
Sbjct: 79 DISKPSEVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVA 138
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATL-HYTATWYQIHVSAAKAAVDSITRSLALEW 187
+ LK+ ++GGR II S+ T + +KAAV+ R+ A++
Sbjct: 139 QQGLKHCRRGGR----------IILTSSIAAVMTGIPNHALYAGSKAAVEGFCRAFAVDC 188
Query: 188 GTDYAIRVNGIAPGPIK-----------DTAGVSKLAPEEIRSKATDYMAAYKFGEKWDI 236
G + VN IAPG +K G + E+I + + G DI
Sbjct: 189 G-AKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPADI 247
Query: 237 AMAALYLASDAG 248
A L +
Sbjct: 248 GRAVSALCQEES 259
|
| >3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} Length = 269 | Back alignment and structure |
|---|
Score = 160 bits (406), Expect = 2e-48
Identities = 63/248 (25%), Positives = 101/248 (40%), Gaps = 31/248 (12%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
KVA++TGG SGIG + L ++GA + + + + D
Sbjct: 12 FTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDVNVSDHFK----------ID 61
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
V E+ VE T +G++DILVN A P +R +I+++ G+++M
Sbjct: 62 VTNEEEVKEAVEKTTKKYGRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAK 121
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
+ + G G IINI++ Y AT +K A+ +TRS+A+++
Sbjct: 122 YTIPVMLAIG--------HGSIINIASVQSYAATKNAAAYVTSKHALLGLTRSVAIDYAP 173
Query: 190 DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK----------FGEKWDIAMA 239
IR N + PG I T V K A E+ + G ++A
Sbjct: 174 K--IRCNAVCPGTI-MTPMVIKAAKMEVGEDENAVERKIEEWGRQHPMGRIGRPEEVAEV 230
Query: 240 ALYLASDA 247
+LASD
Sbjct: 231 VAFLASDR 238
|
| >4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} Length = 272 | Back alignment and structure |
|---|
Score = 160 bits (406), Expect = 2e-48
Identities = 65/243 (26%), Positives = 112/243 (46%), Gaps = 12/243 (4%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAI-MGRRKTVLRSAVAALHSLGIPAIGLEG 68
V L+TGG GIG + + G + + + + VAA+ G A+ + G
Sbjct: 24 SDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPG 83
Query: 69 DVRKREDAVRVVESTINHFGKLDILVN-AAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIM 127
DV D + + FG+LD LVN A ++ +++S ++ ++ G+ +
Sbjct: 84 DVGNAADIAAMFSAVDRQFGRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILC 143
Query: 128 CHEALKYLKKGGRGQASSSSGGIIINIS--ATLHYTATWYQIHVSAAKAAVDSITRSLAL 185
EA++ + + GQ GG I+N+S A + +AT Y + +A+KAA+D+ T LA
Sbjct: 144 AAEAVRRMSRLYSGQ-----GGAIVNVSSMAAILGSATQY-VDYAASKAAIDTFTIGLAR 197
Query: 186 EWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245
E IRVN + PG I +T + + + + + G ++A A LYL S
Sbjct: 198 EVA-AEGIRVNAVRPGII-ETDLHASGGLPDRAREMAPSVPMQRAGMPEEVADAILYLLS 255
Query: 246 DAG 248
+
Sbjct: 256 PSA 258
|
| >3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A Length = 270 | Back alignment and structure |
|---|
Score = 159 bits (405), Expect = 2e-48
Identities = 67/251 (26%), Positives = 112/251 (44%), Gaps = 23/251 (9%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIM-GRRKTVLRSAVAALHSLGIPAIGLEG 68
L GKVAL+TG G GIG +++ LG+ GA + + V+ + +LG AI ++
Sbjct: 16 LDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKA 75
Query: 69 DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
D+R+ + V++ + + HFG LDI V+ + +D++ F V +++ G F +
Sbjct: 76 DIRQVPEIVKLFDQAVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVA 135
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATW-YQIHVSAAKAAVDSITRSLALEW 187
EA ++L +GGR I+ S+ + S +K AVDS R + +
Sbjct: 136 REAYRHLTEGGR----------IVLTSSNTSKDFSVPKHSLYSGSKGAVDSFVRIFSKDC 185
Query: 188 GTDYAIRVNGIAPGPIK----------DTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIA 237
G D I VN +APG + E+ + A ++ G D+A
Sbjct: 186 G-DKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASPLHRNGWPQDVA 244
Query: 238 MAALYLASDAG 248
+L S G
Sbjct: 245 NVVGFLVSKEG 255
|
| >1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* Length = 283 | Back alignment and structure |
|---|
Score = 159 bits (405), Expect = 4e-48
Identities = 76/252 (30%), Positives = 117/252 (46%), Gaps = 24/252 (9%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAI-MGRRKTVLRSAVAALHSLGIPAIGLEG 68
L+GKVAL+TG G GIG E++++LG+ G + + VAA+ G A ++
Sbjct: 27 LEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKA 86
Query: 69 DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
+V ED VR+ E + FGKLDI+ + + +D++P F V I++ G F +
Sbjct: 87 NVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVA 146
Query: 129 HEALKYLKKGGRGQASSSSGGIIINI-SATLHYTATWYQIHVSAAKAAVDSITRSLALEW 187
EA K+L+ GGR +I + S T A S +K A+++ R +A++
Sbjct: 147 REAYKHLEIGGR----------LILMGSITGQAKAVPKHAVYSGSKGAIETFARCMAIDM 196
Query: 188 GTDYAIRVNGIAPGPIK-----------DTAGVSKLAPEEIRSKATDYMAAYKFGEKWDI 236
D I VN +APG IK G + E A + + G DI
Sbjct: 197 A-DKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDI 255
Query: 237 AMAALYLASDAG 248
A +LAS+ G
Sbjct: 256 ARVVCFLASNDG 267
|
| >1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* Length = 260 | Back alignment and structure |
|---|
Score = 158 bits (401), Expect = 6e-48
Identities = 64/238 (26%), Positives = 103/238 (43%), Gaps = 19/238 (7%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L GKVAL++GG G+G + GA + ++ A L A + D
Sbjct: 5 LTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAEL---ADAARYVHLD 61
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
V + V++ + FG L +LVN A + ED + ++ +++++ G F+
Sbjct: 62 VTQPAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIR 121
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
+K +K+ G G IINIS+ T +A K AV +T+S ALE G
Sbjct: 122 AVVKPMKEAG--------RGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELG- 172
Query: 190 DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247
IRVN I PG + T + + + A + E +++ +YLASD
Sbjct: 173 PSGIRVNSIHPGLV-KTPMTDWVPEDIFQ------TALGRAAEPVEVSNLVVYLASDE 223
|
| >1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* Length = 254 | Back alignment and structure |
|---|
Score = 158 bits (401), Expect = 7e-48
Identities = 67/239 (28%), Positives = 95/239 (39%), Gaps = 15/239 (6%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L GK ++TGG G+G E + Q GA + + + L G A D
Sbjct: 3 LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL---GDAARYQHLD 59
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
V ED RVV FG +D LVN A + + E S FR V+EI+ G FI
Sbjct: 60 VTIEEDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMK 119
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
+ +K G GG I+NIS+ A+K V +++ A+E G
Sbjct: 120 TVIPAMKDAG--------GGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELG- 170
Query: 190 DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEK-WDIAMAALYLASDA 247
IRVN + PG T ++ + G + +IA A + L SD
Sbjct: 171 TDRIRVNSVHPGMT-YTPMTAET-GIRQGEGNYPNTPMGRVGNEPGEIAGAVVKLLSDT 227
|
| >3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} Length = 271 | Back alignment and structure |
|---|
Score = 158 bits (401), Expect = 9e-48
Identities = 71/241 (29%), Positives = 106/241 (43%), Gaps = 16/241 (6%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIM-GRRKTVLRSAVAALHSLGIPAIGLEG 68
L GK A +TGG GIG I+ +L GAA+A+ ++ V+ + G A+ +
Sbjct: 29 LAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRA 88
Query: 69 DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
D R E + + T+ G LDILVN+A P E+ + F V+ ++ F+
Sbjct: 89 DNRDAEAIEQAIRETVEALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAI 148
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATW-YQIHVSAAKAAVDSITRSLALEW 187
A ++L GGR II I + L W SA+KAA+ +T+ LA +
Sbjct: 149 RSASRHLGDGGR----------IITIGSNLAELVPWPGISLYSASKAALAGLTKGLARDL 198
Query: 188 GTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247
G I VN + PG DT + + +A +GE DIA +LA
Sbjct: 199 GP-RGITVNIVHPGST-DTDMNPAD--GDHAEAQRERIATGSYGEPQDIAGLVAWLAGPQ 254
Query: 248 G 248
G
Sbjct: 255 G 255
|
| >3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} Length = 294 | Back alignment and structure |
|---|
Score = 158 bits (402), Expect = 1e-47
Identities = 68/243 (27%), Positives = 109/243 (44%), Gaps = 16/243 (6%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAI--MGRRKTVLRSAVAALHSLGIPAIGLE 67
LK + AL+TGG SGIG ++ + GA +AI + + + A + G A+ L
Sbjct: 47 LKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLP 106
Query: 68 GDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPA-EDLSPNGFRTVIEIDSVGTFI 126
GD+ A +V G LDIL A +P +DL+ F+ ++ F
Sbjct: 107 GDLSDESFARSLVHKAREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFW 166
Query: 127 MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALE 186
+ EA+ L KG II S+ Y + + + +A KAA+ + +R LA +
Sbjct: 167 ITQEAIPLLPKGAS----------IITTSSIQAYQPSPHLLDYAATKAAILNYSRGLAKQ 216
Query: 187 WGTDYAIRVNGIAPGPIKDTAG-VSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245
+ IRVN +APGPI TA +S ++ + + G+ ++A +YLAS
Sbjct: 217 VA-EKGIRVNIVAPGPI-WTALQISGGQTQDKIPQFGQQTPMKRAGQPAELAPVYVYLAS 274
Query: 246 DAG 248
Sbjct: 275 QES 277
|
| >4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} Length = 244 | Back alignment and structure |
|---|
Score = 155 bits (395), Expect = 4e-47
Identities = 43/247 (17%), Positives = 86/247 (34%), Gaps = 31/247 (12%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L+TGG GIG + L ++ I + + ++ D
Sbjct: 2 NAMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFSAENL---------KFIKAD 52
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
+ K++D V++ D + A D+ + V++++ +
Sbjct: 53 LTKQQDITNVLDII--KNVSFDGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIK 110
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
LK G I+ + + A + +K A+ +T+SLAL+
Sbjct: 111 GLENNLKVGAS----------IVFNGSDQCFIAKPNSFAYTLSKGAIAQMTKSLALDLA- 159
Query: 190 DYAIRVNGIAPGPI---------KDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAA 240
Y IRVN + PG + + A ++ +E + + + + +IA
Sbjct: 160 KYQIRVNTVCPGTVDTDLYRNLIQKYANNVGISFDEAQKQEEKEFPLNRIAQPQEIAELV 219
Query: 241 LYLASDA 247
++L SD
Sbjct: 220 IFLLSDK 226
|
| >2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 Length = 263 | Back alignment and structure |
|---|
Score = 156 bits (396), Expect = 5e-47
Identities = 61/238 (25%), Positives = 103/238 (43%), Gaps = 17/238 (7%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L GK L+TG SGIG + GA++ + R + +L AVAA L AI + D
Sbjct: 4 LSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAA---LEAEAIAVVAD 60
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
V + V + FG+L + + A + +L + V+ ++ G+F++
Sbjct: 61 VSDPKAVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVAR 120
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
+A + L++GG ++ + + H +A K V + R+LALE
Sbjct: 121 KAGEVLEEGGS----------LVLTGSVAG-LGAFGLAHYAAGKLGVVGLARTLALELAR 169
Query: 190 DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247
+RVN + PG I T + L P + + G ++A AAL+L S+
Sbjct: 170 -KGVRVNVLLPGLI-QTPMTAGL-PPWAWEQEVGASPLGRAGRPEEVAQAALFLLSEE 224
|
| >2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 Length = 267 | Back alignment and structure |
|---|
Score = 155 bits (394), Expect = 8e-47
Identities = 66/250 (26%), Positives = 104/250 (41%), Gaps = 28/250 (11%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL--GIPAIGLE 67
+ GKVAL+TG GIG + L GA +A++ AALH + ++
Sbjct: 5 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQ 64
Query: 68 GDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIM 127
DV ++ ++HFG+LDILVN A + ++ + ++I+ V
Sbjct: 65 CDVADQQQLRDTFRKVVDHFGRLDILVNNAG---VNNEKN-----WEKTLQINLVSVISG 116
Query: 128 CHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEW 187
+ L Y+ K G GGIIIN+S+ Q A+K + TRS AL
Sbjct: 117 TYLGLDYMSKQNGG-----EGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRSAALA- 170
Query: 188 GTDYA---IRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK-------FGEKWDIA 237
+ +R+N I PG + +TA + + EE + +Y K + IA
Sbjct: 171 -ANLMNSGVRLNAICPGFV-NTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIA 228
Query: 238 MAALYLASDA 247
+ L D
Sbjct: 229 NGLITLIEDD 238
|
| >3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} Length = 254 | Back alignment and structure |
|---|
Score = 155 bits (393), Expect = 9e-47
Identities = 49/248 (19%), Positives = 94/248 (37%), Gaps = 27/248 (10%)
Query: 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMG--RRKTVLRSAVAALHSLGIPAIGLEGD 69
GKV L+TG GIG I L + G R + L+ G + GD
Sbjct: 2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKY---GDRFFYVVGD 58
Query: 70 VRKREDAVRVVESTINHFGKLDILV-NAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
+ + ++V + + GK+D LV NA + ++ N ++ + +I+ +
Sbjct: 59 ITEDSVLKQLVNAAVKGHGKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLV 118
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
AL LKK + G ++ +S+ ++KAA++ +LA E
Sbjct: 119 GIALPELKK---------TNGNVVFVSSDACNMYFSSWGAYGSSKAALNHFAMTLANE-- 167
Query: 189 TDYAIRVNGIAPGPI--------KDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAA 240
+ ++ +APG + ++ G S ++ E+++ + + A
Sbjct: 168 -ERQVKAIAVAPGIVDTDMQVNIRENVGPSSMSAEQLK-MFRGLKENNQLLDSSVPATVY 225
Query: 241 LYLASDAG 248
LA
Sbjct: 226 AKLALHGI 233
|
| >2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A Length = 264 | Back alignment and structure |
|---|
Score = 155 bits (394), Expect = 1e-46
Identities = 54/248 (21%), Positives = 94/248 (37%), Gaps = 32/248 (12%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L+ KV ++TG GIG I+ + G+ + + +E D
Sbjct: 6 LRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHD-----------PGEAKYDHIECD 54
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
V + ++ +G + +LVN A E +S +R +I+++ G +
Sbjct: 55 VTNPDQVKASIDHIFKEYGSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASK 114
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
A+ Y+ + I+NIS+ T +K AV +T+S+AL++
Sbjct: 115 FAIPYMIRSR--------DPSIVNISSVQASIITKNASAYVTSKHAVIGLTKSIALDYAP 166
Query: 190 DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK----------FGEKWDIAMA 239
+R N + P I DT V K A E+ S G+ ++A A
Sbjct: 167 L--LRCNAVCPATI-DTPLVRKAAELEVGSDPMRIEKKISEWGHEHPMQRIGKPQEVASA 223
Query: 240 ALYLASDA 247
+LAS
Sbjct: 224 VAFLASRE 231
|
| >2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A Length = 239 | Back alignment and structure |
|---|
Score = 154 bits (391), Expect = 2e-46
Identities = 64/238 (26%), Positives = 105/238 (44%), Gaps = 22/238 (9%)
Query: 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK 72
+ AL+TGG GIG I+ L G +AI R ++ A+ L D+
Sbjct: 3 RKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEEAAQSLGAV--------PLPTDLE- 53
Query: 73 REDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEAL 132
++D +V+ + G L +LV+AAA N PA +LS +R V+ + F++ A
Sbjct: 54 KDDPKGLVKRALEALGGLHVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAA 113
Query: 133 KYLKKGGRGQASSSSGGIIINISATLHYTATWY--QIHVSAAKAAVDSITRSLALEWGTD 190
++ + G G+ ++ I + +TA + AK A+ +TR+LA EW
Sbjct: 114 PHMAEAGWGR--------VLFIGSVTTFTAGGPVPIPAYTTAKTALLGLTRALAKEWA-R 164
Query: 191 YAIRVNGIAPGPIKDTAGVSKL-APEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247
IRVN + PG + +T L E+ T + ++ +IA A L D
Sbjct: 165 LGIRVNLLCPGYV-ETEFTLPLRQNPELYEPITARIPMGRWARPEEIARVAAVLCGDE 221
|
| >2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A Length = 255 | Back alignment and structure |
|---|
Score = 154 bits (391), Expect = 2e-46
Identities = 61/247 (24%), Positives = 94/247 (38%), Gaps = 20/247 (8%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
LKGK AL+TG SGIG I+ L + GA I + G A+A + G+ A+ D
Sbjct: 2 LKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP--APALAEIARHGVKAVHHPAD 59
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
+ + FG +DILVN A + P E + +I ++ F
Sbjct: 60 LSDVAQIEALFALAEREFGGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTR 119
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
AL ++ G IINI++ + + AAK V +T+ + LE T
Sbjct: 120 LALPGMRARN--------WGRIINIASVHGLVGSTGKAAYVAAKHGVVGLTKVVGLETAT 171
Query: 190 DYAIRVNGIAPGPIK---------DTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAA 240
+ N I PG + D A + + + F +
Sbjct: 172 -SNVTCNAICPGWVLTPLVQKQIDDRAANGGDPLQAQHDLLAEKQPSLAFVTPEHLGELV 230
Query: 241 LYLASDA 247
L+L S+A
Sbjct: 231 LFLCSEA 237
|
| >3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} Length = 260 | Back alignment and structure |
|---|
Score = 154 bits (391), Expect = 2e-46
Identities = 47/236 (19%), Positives = 83/236 (35%), Gaps = 20/236 (8%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L L+TG +G +L+L +HG + I R + ++V L G A+ L GD
Sbjct: 25 LSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTE---HASVTELRQAG--AVALYGD 79
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
+ ++ L +V+ A +L + F + + + +++
Sbjct: 80 FSCETGIMAFIDLLKTQTSSLRAVVH-NASEWLAETPGEEADNFTRMFSVHMLAPYLINL 138
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
L I++IS + + I A KA ++S+T S A +
Sbjct: 139 HCEPLLTASE--------VADIVHISDDVTRKGSSKHIAYCATKAGLESLTLSFAARFAP 190
Query: 190 DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245
++VNGIAP + R+ A A I + YL
Sbjct: 191 L--VKVNGIAPALL-MFQP---KDDAAYRANALAKSALGIEPGAEVIYQSLRYLLD 240
|
| >3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} Length = 262 | Back alignment and structure |
|---|
Score = 154 bits (391), Expect = 2e-46
Identities = 58/239 (24%), Positives = 97/239 (40%), Gaps = 20/239 (8%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L G+VA++TG GIG I+ +LG GA + + R LR+ + + G A D
Sbjct: 27 LSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACD 86
Query: 70 VRKREDAVRVVESTINHFGKLDILV-NAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
+ + + G+ D+LV NA G F P + P + +I ++ +++
Sbjct: 87 LSHSDAIAAFATGVLAAHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLL 146
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
+ RG IINIS+ +A+K ++ + S A E
Sbjct: 147 RAFAPAMIAAKRGH--------IINISSLAGKNPVADGAAYTASKWGLNGLMTSAAEELR 198
Query: 189 TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247
+ +RV+ +APG + T L+ ++ A E DIA LA+ A
Sbjct: 199 Q-HQVRVSLVAPGSV-RTEFGVGLSAKKSALGA---------IEPDDIADVVALLATQA 246
|
| >2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* Length = 278 | Back alignment and structure |
|---|
Score = 154 bits (391), Expect = 3e-46
Identities = 62/245 (25%), Positives = 102/245 (41%), Gaps = 18/245 (7%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L+ KVA++TGG GIG + ++GA + I + + S + + D
Sbjct: 14 LQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDV-ISFVHCD 72
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAA--AGNFLVPAEDLSPNGFRTVIEIDSVGTFIM 127
V K ED +V++TI GKLDI+ + F+ V++I+ G F++
Sbjct: 73 VTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLV 132
Query: 128 CHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHV-SAAKAAVDSITRSLALE 186
A + + G I+ ++ +TA HV +A K AV +T SL E
Sbjct: 133 AKHAARVMIPAK--------KGSIVFTASISSFTAGEGVSHVYTATKHAVLGLTTSLCTE 184
Query: 187 WGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAY----KFGEKWDIAMAALY 242
G +Y IRVN ++P + + ++ + + A D+A A Y
Sbjct: 185 LG-EYGIRVNCVSPYIV-ASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVADAVAY 242
Query: 243 LASDA 247
LA D
Sbjct: 243 LAGDE 247
|
| >3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} Length = 277 | Back alignment and structure |
|---|
Score = 154 bits (391), Expect = 4e-46
Identities = 68/260 (26%), Positives = 106/260 (40%), Gaps = 29/260 (11%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIM-------------GRRKTVLRSAVAAL 56
L+G+VA +TG G G ++++ GA I + L V +
Sbjct: 9 LEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLV 68
Query: 57 HSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTV 116
+ + D R + +VV+ + G+LDI+V A +D++P FR V
Sbjct: 69 EAANRRIVAAVVDTRDFDRLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDV 128
Query: 117 IEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAV 176
++I+ GT+ + +GGR GG II IS+ + IH +A+K AV
Sbjct: 129 MDINVTGTWNTVMAGAPRIIEGGR-------GGSIILISSAAGMKMQPFMIHYTASKHAV 181
Query: 177 DSITRSLALEWGTDYAIRVNGIAPGPI--------KDTAGVSKLAPEEIRSKATDYMAAY 228
+ R+ A E G ++IRVN + PGP+ TA + S
Sbjct: 182 TGLARAFAAELGK-HSIRVNSVHPGPVNTPMGSGDMVTAVGQAMETNPQLSHVLTPFLPD 240
Query: 229 KFGEKWDIAMAALYLASDAG 248
E DIA +LASD
Sbjct: 241 WVAEPEDIADTVCWLASDES 260
|
| >3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} Length = 252 | Back alignment and structure |
|---|
Score = 153 bits (388), Expect = 5e-46
Identities = 42/237 (17%), Positives = 78/237 (32%), Gaps = 12/237 (5%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
+ + G G IG EI+ + G + R L VA + + G + D
Sbjct: 5 PRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLD 64
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
R ++ + + L++ + N P + + FR V E+ F+
Sbjct: 65 ARNEDEVTAFLN-AADAHAPLEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGR 123
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
E+ + + G+G+ I AT ++AK + ++ +S+A E
Sbjct: 124 ESARLMLAHGQGK--------IFFTGATASLRGGSGFAAFASAKFGLRAVAQSMARELMP 175
Query: 190 DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246
+ I + DTA V + + A +A A L
Sbjct: 176 KNIHVAHLIIDSGV-DTAWVRERREQMFGKDALANPD--LLMPPAAVAGAYWQLYQQ 229
|
| >4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} Length = 280 | Back alignment and structure |
|---|
Score = 153 bits (390), Expect = 5e-46
Identities = 60/241 (24%), Positives = 96/241 (39%), Gaps = 10/241 (4%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR-KTVLRSAVAALHSLGIPAIGLEG 68
VA++TGG GIG I+ L G IAI G + +A L LG I L
Sbjct: 27 KARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRA 86
Query: 69 DVRKREDAVRVVESTINHFGKLDILVNAA--AGNFLVPAEDLSPNGFRTVIEIDSVGTFI 126
D+ V++ + FG++D LVN A A DL P F T++ ++ GT
Sbjct: 87 DLADLSSHQATVDAVVAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVF 146
Query: 127 MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALE 186
LK + IINI++ + ++ +KA + + ++ LAL
Sbjct: 147 FTQAVLKAMLASDARA-----SRSIINITSVSAVMTSPERLDYCMSKAGLAAFSQGLALR 201
Query: 187 WGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246
I V + PG I + + ++ + + + ++GE DI LA
Sbjct: 202 LAE-TGIAVFEVRPGII-RSDMTAAVSGKYDGLIESGLVPMRRWGEPEDIGNIVAGLAGG 259
Query: 247 A 247
Sbjct: 260 Q 260
|
| >3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} Length = 251 | Back alignment and structure |
|---|
Score = 152 bits (387), Expect = 7e-46
Identities = 44/242 (18%), Positives = 69/242 (28%), Gaps = 37/242 (15%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
K L+ GG +G E+ + R+
Sbjct: 20 HMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNA------------DHSFTIK 67
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAG-NFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
E+ V+E + K+D V AA G + + D + +I+++ F
Sbjct: 68 DSGEEEIKSVIEKINSKSIKVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASA 127
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
H K L +GG + A+ T I A KAA I + LA E G
Sbjct: 128 HIGAKLLNQGGL----------FVLTGASAALNRTSGMIAYGATKAATHHIIKDLASENG 177
Query: 189 TD-YAIRVNGIAPGPIKDTAGVSKLAPEEIRSKAT--DYMAAYKFGEKWDIAMAALYLAS 245
GI P + DT K + T +A + +
Sbjct: 178 GLPAGSTSLGILPVTL-DTPTNRKYMSDANFDDWTPLSEVA----------EKLFEWSTN 226
Query: 246 DA 247
Sbjct: 227 SD 228
|
| >3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} PDB: 3uwr_A* Length = 286 | Back alignment and structure |
|---|
Score = 153 bits (389), Expect = 7e-46
Identities = 64/268 (23%), Positives = 102/268 (38%), Gaps = 38/268 (14%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIM----------------GRRKTVLRSAV 53
++GKVA +TG G G +++L + GA I + L
Sbjct: 9 VEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETA 68
Query: 54 AALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILV-NAAAGNFLVPAEDLSPNG 112
+ + E DVR + V+S + G+LDI+V NA GN + S
Sbjct: 69 DLVKGHNRRIVTAEVDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEED 128
Query: 113 FRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAA 172
+ +I+I+ G + + ++ GGR GG II S+ A + H AA
Sbjct: 129 WTEMIDINLAGVWKTVKAGVPHMIAGGR-------GGSIILTSSVGGLKAYPHTGHYVAA 181
Query: 173 KAAVDSITRSLALEWGTDYAIRVNGIAPGPI-----KDTAGVSKLAPEEIRSKATDYMAA 227
K V + R+ +E G + IRVN + P + + P+ D
Sbjct: 182 KHGVVGLMRAFGVELGQ-HMIRVNSVHPTHVKTPMLHNEGTFKMFRPDLENPGPDDMAPI 240
Query: 228 YK--------FGEKWDIAMAALYLASDA 247
+ + E DI+ A L+ ASD
Sbjct: 241 CQMFHTLPIPWVEPIDISNAVLFFASDE 268
|
| >3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} Length = 281 | Back alignment and structure |
|---|
Score = 152 bits (386), Expect = 2e-45
Identities = 66/251 (26%), Positives = 102/251 (40%), Gaps = 23/251 (9%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAAL--HSLGIPAIGLE 67
+ K A++TG SGIG I+ L K GA I + G V +
Sbjct: 23 MMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHP 82
Query: 68 GDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIM 127
D+ K + ++ + FG DILVN A F+ ED + +I ++ +F
Sbjct: 83 ADMTKPSEIADMMAMVADRFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHT 142
Query: 128 CHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEW 187
A+ +KK G G IINI++ A+ ++ AAK + +T+++ALE
Sbjct: 143 IRGAIPPMKKKG--------WGRIINIASAHGLVASPFKSAYVAAKHGIMGLTKTVALEV 194
Query: 188 GTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK-----------FGEKWDI 236
+ VN I PG + T V K P++ R++ F +
Sbjct: 195 AE-SGVTVNSICPGYV-LTPLVEKQIPDQARTRGITEEQVINEVMLKGQPTKKFITVEQV 252
Query: 237 AMAALYLASDA 247
A ALYLA D
Sbjct: 253 ASLALYLAGDD 263
|
| >3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* Length = 247 | Back alignment and structure |
|---|
Score = 151 bits (383), Expect = 3e-45
Identities = 65/242 (26%), Positives = 100/242 (41%), Gaps = 20/242 (8%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L GK AL+TG GIG I+ +L GA + + ++A A+ +G A + D
Sbjct: 4 LAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAAS---IGKKARAIAAD 60
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAG----NFLVPAEDLSPNGFRTVIEIDSVGTF 125
+ + G +DILVN A D+ + +R +I+++ GTF
Sbjct: 61 ISDPGSVKALFAEIQALTGGIDILVN-NASIVPFVAWD---DVDLDHWRKIIDVNLTGTF 116
Query: 126 IMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLAL 185
I+ ++ G+ G +I+I++ + T AAK V TR+LA
Sbjct: 117 IVTRAGTDQMRAAGK-------AGRVISIASNTFFAGTPNMAAYVAAKGGVIGFTRALAT 169
Query: 186 EWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245
E G Y I N + PG I ++ GV E A G+ IA +LAS
Sbjct: 170 ELGK-YNITANAVTPGLI-ESDGVKASPHNEAFGFVEMLQAMKGKGQPEHIADVVSFLAS 227
Query: 246 DA 247
D
Sbjct: 228 DD 229
|
| >1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* Length = 260 | Back alignment and structure |
|---|
Score = 151 bits (383), Expect = 3e-45
Identities = 68/251 (27%), Positives = 107/251 (42%), Gaps = 21/251 (8%)
Query: 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAA--LHSLGIPAIGL 66
+LKGKVA++TG SGIG I+ L GA I + G V A G+ +
Sbjct: 1 MLKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYD 60
Query: 67 EGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFI 126
D+ K E +V++ + G++DILVN A ED + ++ ++ F
Sbjct: 61 GADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFH 120
Query: 127 MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALE 186
AL ++KK G G+ IINI++ A+ + AAK V T+ ALE
Sbjct: 121 GTAAALPHMKKQGFGR--------IINIASAHGLVASANKSAYVAAKHGVVGFTKVTALE 172
Query: 187 WGTDYAIRVNGIAPGPIK---------DTAGVSKLAPEEIRSKA-TDYMAAYKFGEKWDI 236
I N I PG ++ A + + E + ++ + +F +
Sbjct: 173 TAG-QGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQL 231
Query: 237 AMAALYLASDA 247
A++LASDA
Sbjct: 232 GGTAVFLASDA 242
|
| >3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} Length = 280 | Back alignment and structure |
|---|
Score = 151 bits (385), Expect = 3e-45
Identities = 61/258 (23%), Positives = 101/258 (39%), Gaps = 28/258 (10%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIM-------------GRRKTVLRSAVAAL 56
L+G+VA +TG G G +++L GA I L +
Sbjct: 13 LQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLV 72
Query: 57 HSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTV 116
G A+ DVR +V + FG+LD++V A +L+ + TV
Sbjct: 73 EDQGRKALTRVLDVRDDAALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTV 132
Query: 117 IEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAV 176
I ++ GT+ + + + G GG I+ +S++ AT H SA+K +
Sbjct: 133 IGVNLTGTWRTLRATVPAMIEAGN-------GGSIVVVSSSAGLKATPGNGHYSASKHGL 185
Query: 177 DSITRSLALEWGTDYAIRVNGIAPGPIK-------DTAGVSKLAPEEIRSKATDYMAAYK 229
++T +LA+E G Y IRVN I P ++ + P + S +
Sbjct: 186 TALTNTLAIELGE-YGIRVNSIHPYSVETPMIEPEAMMEIFARHPSFVHSFPPMPVQPNG 244
Query: 230 FGEKWDIAMAALYLASDA 247
F ++A +LA D
Sbjct: 245 FMTADEVADVVAWLAGDG 262
|
| >3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} Length = 235 | Back alignment and structure |
|---|
Score = 150 bits (380), Expect = 5e-45
Identities = 45/236 (19%), Positives = 89/236 (37%), Gaps = 24/236 (10%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
+ ++TG GSG+G +++ L + G +++MGRR L+ L G IG+ D
Sbjct: 1 MSLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLL---GNAVIGIVAD 57
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
+ ED + + G +++++ A P + R V+E + V T ++
Sbjct: 58 LAHHEDVDVAFAAAVEWGGLPELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQ 117
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
+ ++ + + GG++ N+ ++ + A+K + SL E
Sbjct: 118 QTVRLIGER---------GGVLANVLSSAAQVGKANESLYCASKWGMRGFLESLRAELK- 167
Query: 190 DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245
D +R+ + P I + E + F D A L
Sbjct: 168 DSPLRLVNLYPSGI-RS---------EFWDNTDHVDPS-GFMTPEDAAAYMLDALE 212
|
| >3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} Length = 262 | Back alignment and structure |
|---|
Score = 150 bits (382), Expect = 6e-45
Identities = 65/243 (26%), Positives = 100/243 (41%), Gaps = 19/243 (7%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIP-AIGLEG 68
L+G+ ++TGG GIG I+ + GA +A+ GR + + VA L LG IG++
Sbjct: 8 LQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQT 67
Query: 69 DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
DV R + + FG +D++ A P ++P + ++ GTF
Sbjct: 68 DVSDRAQCDALAGRAVEEFGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAV 127
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY----QIHVSAAKAAVDSITRSLA 184
L L G G+ ++ S+ T H A KAA R+ A
Sbjct: 128 QACLDALIASGSGR--------VVLTSSI---TGPITGYPGWSHYGATKAAQLGFMRTAA 176
Query: 185 LEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLA 244
+E + I VN I PG I T G+ + EE + + A G DI A +LA
Sbjct: 177 IELAP-HKITVNAIMPGNI-MTEGLLEN-GEEYIASMARSIPAGALGTPEDIGHLAAFLA 233
Query: 245 SDA 247
+
Sbjct: 234 TKE 236
|
| >3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} Length = 287 | Back alignment and structure |
|---|
Score = 150 bits (381), Expect = 1e-44
Identities = 68/265 (25%), Positives = 96/265 (36%), Gaps = 29/265 (10%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIM------------GRRKTVLRSAVAALH 57
++ KV L+TGG G G +++L + GA I + L A +
Sbjct: 8 VQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVE 67
Query: 58 SLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVI 117
G A E DVR R R + + + FGKLD++V A L F
Sbjct: 68 KTGRKAYTAEVDVRDRAAVSRELANAVAEFGKLDVVVANAG--ICPLGAHLPVQAFADAF 125
Query: 118 EIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY-QIHVSAAKAAV 176
++D VG H AL YL G + S G+I S AK V
Sbjct: 126 DVDFVGVINTVHAALPYLTSGASIITTGSVAGLIAAAQPPGAGGPQGPGGAGYSYAKQLV 185
Query: 177 DSITRSLALEWGTDYAIRVNGIAPGPI-----KDTAGVSKLAPEEIRSKATDYMAAY--- 228
DS T LA + +IR N I P + + P+ D + A+
Sbjct: 186 DSYTLQLAAQLA-PQSIRANVIHPTNVNTDMLNSAPMYRQFRPDLEAPSRADALLAFPAM 244
Query: 229 -----KFGEKWDIAMAALYLASDAG 248
+ E DI+ A +LASD
Sbjct: 245 QAMPTPYVEASDISNAVCFLASDES 269
|
| >3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} Length = 279 | Back alignment and structure |
|---|
Score = 150 bits (380), Expect = 2e-44
Identities = 60/257 (23%), Positives = 102/257 (39%), Gaps = 24/257 (9%)
Query: 4 PFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPA 63
P + + + A +TG SGIG ++ L G A+ R + +AV L + G
Sbjct: 16 PRGSHMSRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDV 75
Query: 64 IGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVG 123
G DV ++ V + + FG + ILVN+A N DL + V++ + G
Sbjct: 76 DGSSCDVTSTDEVHAAVAAAVERFGPIGILVNSAGRNGGGETADLDDALWADVLDTNLTG 135
Query: 124 TFIMCHEALKYL----KKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSI 179
F + E L+ GR I+NI++T Y +A+K V
Sbjct: 136 VFRVTREVLRAGGMREAGWGR----------IVNIASTGGKQGVMYAAPYTASKHGVVGF 185
Query: 180 TRSLALEWGTDYAIRVNGIAPGPI---------KDTAGVSKLAPEEIRSKATDYMAAYKF 230
T+S+ E I VN + PG + + A + +E+ + + ++
Sbjct: 186 TKSVGFELAK-TGITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNAKIPLGRY 244
Query: 231 GEKWDIAMAALYLASDA 247
++A YL +DA
Sbjct: 245 STPEEVAGLVGYLVTDA 261
|
| >3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* Length = 291 | Back alignment and structure |
|---|
Score = 149 bits (379), Expect = 3e-44
Identities = 74/244 (30%), Positives = 110/244 (45%), Gaps = 24/244 (9%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVL------RSAVAALHSLGIPA 63
LKGK L+TGG SGIG +S+ K GA IAI L + G+
Sbjct: 45 LKGKNVLITGGDSGIGRAVSIAFAKEGANIAI-----AYLDEEGDANETKQYVEKEGVKC 99
Query: 64 IGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPA-EDLSPNGFRTVIEIDSV 122
+ L GD+ + +V+ T+ G L+ILVN A + E ++ I+
Sbjct: 100 VLLPGDLSDEQHCKDIVQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIF 159
Query: 123 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRS 182
F + AL +LK+G IIN ++ + Y I SA K A+ + TRS
Sbjct: 160 SYFHVTKAALSHLKQGDV----------IINTASIVAYEGNETLIDYSATKGAIVAFTRS 209
Query: 183 LALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALY 242
L+ IRVNG+APGPI T + E+ S+ + + G+ +++A A +Y
Sbjct: 210 LSQSLV-QKGIRVNGVAPGPI-WTPLIPSSFDEKKVSQFGSNVPMQRPGQPYELAPAYVY 267
Query: 243 LASD 246
LAS
Sbjct: 268 LASS 271
|
| >2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 Length = 246 | Back alignment and structure |
|---|
Score = 148 bits (375), Expect = 4e-44
Identities = 61/244 (25%), Positives = 97/244 (39%), Gaps = 25/244 (10%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L GKV +LT GIG +L + GA + ++ L+ GI L D
Sbjct: 4 LDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYP---GIQTRVL--D 58
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
V K++ ++ N +LD+L N A D + + ++ ++M
Sbjct: 59 VTKKKQ----IDQFANEVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIK 114
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWY-QIHVSAAKAAVDSITRSLALEWG 188
L + G IIN+S+ + S KAAV +T+S+A ++
Sbjct: 115 AFLPKMLAQK--------SGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSVAADFI 166
Query: 189 TDYAIRVNGIAPGPIKDTAGVSKLA-----PEEIRSKATDYMAAYKFGEKWDIAMAALYL 243
IR N + PG + DT + + PEE R+ +F +IAM +YL
Sbjct: 167 QQ-GIRCNCVCPGTV-DTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAMLCVYL 224
Query: 244 ASDA 247
ASD
Sbjct: 225 ASDE 228
|
| >3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} Length = 250 | Back alignment and structure |
|---|
Score = 147 bits (374), Expect = 6e-44
Identities = 48/240 (20%), Positives = 88/240 (36%), Gaps = 23/240 (9%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG---IPAIGL 66
+ +A++TG GIG I+ L G + ++ R K L + I L
Sbjct: 5 KQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVL 64
Query: 67 EGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFI 126
D+ A ++ +G +DILVN AA F+ + + FR ++EI+ + +
Sbjct: 65 PLDITDCTKADTEIKDIHQKYGAVDILVN-AAAMFMDGSLSEPVDNFRKIMEINVIAQYG 123
Query: 127 MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALE 186
+ + +K G I N+++ + K A+ + SL E
Sbjct: 124 ILKTVTEIMKVQKNGY--------IFNVASRAAKYGFADGGIYGSTKFALLGLAESLYRE 175
Query: 187 WGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246
IRV + PG + +T ++ KA + + D+ L +
Sbjct: 176 LA-PLGIRVTTLCPGWV-NT---------DMAKKAGTPFKDEEMIQPDDLLNTIRCLLNL 224
|
| >3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} Length = 299 | Back alignment and structure |
|---|
Score = 148 bits (377), Expect = 6e-44
Identities = 63/264 (23%), Positives = 107/264 (40%), Gaps = 34/264 (12%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIM------------GRRKTVLRSAVAALH 57
++GKVA +TG G G ++ L + GA I + L V +
Sbjct: 26 VEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVE 85
Query: 58 SLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILV-NAAAGNFLVPAEDLSPNGFRTV 116
+LG I + DVR + V+ + G+LDI++ NAA + + P +R +
Sbjct: 86 ALGRRIIASQVDVRDFDAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDM 145
Query: 117 IEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAV 176
I+++ G +I A+ ++ G R GG I+ S+ + A+K +
Sbjct: 146 IDVNLNGAWITARVAIPHIMAGKR-------GGSIVFTSSIGGLRGAENIGNYIASKHGL 198
Query: 177 DSITRSLALEWGTDYAIRVNGIAPGPI-----KDTAGVSKLAPEEIRSKATDYMAAYK-- 229
+ R++ALE G IRVN + P + + P+ D+ A +
Sbjct: 199 HGLMRTMALELGP-RNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENPTVEDFQVASRQM 257
Query: 230 ------FGEKWDIAMAALYLASDA 247
+ E DI+ A L+L SD
Sbjct: 258 HVLPIPYVEPADISNAILFLVSDD 281
|
| >3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} Length = 260 | Back alignment and structure |
|---|
Score = 147 bits (374), Expect = 7e-44
Identities = 59/238 (24%), Positives = 95/238 (39%), Gaps = 25/238 (10%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
+ KV ++TG GIG + + R +A + GD
Sbjct: 26 NQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSR-----SIKPSA----DPDIHTVAGD 76
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
+ K E A R+V I FG++D LVN A P +++ + + ++ G F +
Sbjct: 77 ISKPETADRIVREGIERFGRIDSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQ 136
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHV--SAAKAAVDSITRSLALEW 187
A + K G G I++I+ +L S K ++++TRSLA+E+
Sbjct: 137 RAAAEMLKQG--------SGHIVSITTSLVDQPMVGMPSALASLTKGGLNAVTRSLAMEF 188
Query: 188 GTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245
+RVN ++PG I T + P E S + GE D+ A LYL
Sbjct: 189 S-RSGVRVNAVSPGVI-KTP----MHPAETHSTLAGLHPVGRMGEIRDVVDAVLYLEH 240
|
| >1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... Length = 286 | Back alignment and structure |
|---|
Score = 148 bits (375), Expect = 9e-44
Identities = 48/206 (23%), Positives = 84/206 (40%), Gaps = 11/206 (5%)
Query: 1 MESPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG 60
+ F+ ++L+GK ++TG GIG E++ L K GA + + R K L+ V+ LG
Sbjct: 17 LNEEFRPEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELG 76
Query: 61 -IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEI 119
A + G + A + V G LD+L+ N + + R +E+
Sbjct: 77 AASAHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEV 136
Query: 120 DSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSI 179
+ + ++ AL LK+ G I+ +S+ A SA+K A+D
Sbjct: 137 NFLSYVVLTVAALPMLKQS---------NGSIVVVSSLAGKVAYPMVAAYSASKFALDGF 187
Query: 180 TRSLALEWGTD-YAIRVNGIAPGPIK 204
S+ E+ + + G I
Sbjct: 188 FSSIRKEYSVSRVNVSITLCVLGLID 213
|
| >2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} Length = 260 | Back alignment and structure |
|---|
Score = 147 bits (373), Expect = 1e-43
Identities = 55/252 (21%), Positives = 94/252 (37%), Gaps = 25/252 (9%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
+ G+V ++TG GIG I+LQL K GA + I GR LR SLG + + D
Sbjct: 3 MNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCD 62
Query: 70 VRKREDAVRVVEST-INHFGKLDILVNAAAGNFLV-------PAEDLSPNGFRTVIEIDS 121
+ + + E G+LD+LVN A + + + + +
Sbjct: 63 SSQESEVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGL 122
Query: 122 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINIS--ATLHYTATWYQIHVSAAKAAVDSI 179
G + + + G G+I+ IS +L Y + + KAA D +
Sbjct: 123 RGHYFCSVYGARLMVPAG--------QGLIVVISSPGSLQYM---FNVPYGVGKAACDKL 171
Query: 180 TRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKAT--DYMAAYKFGEK-WDI 236
A E + + + PG ++ +A EE+ + +A+ E
Sbjct: 172 AADCAHELR-RHGVSCVSLWPGIVQTELLKEHMAKEEVLQDPVLKQFKSAFSSAETTELS 230
Query: 237 AMAALYLASDAG 248
+ LA+D
Sbjct: 231 GKCVVALATDPN 242
|
| >3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} Length = 317 | Back alignment and structure |
|---|
Score = 148 bits (376), Expect = 1e-43
Identities = 63/264 (23%), Positives = 107/264 (40%), Gaps = 33/264 (12%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTV------------LRSAVAALH 57
L+GKVA +TG G G +++L + GA I + + L+ V +
Sbjct: 44 LQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVE 103
Query: 58 SLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVI 117
G I + DVR VV+ + FG +DILV+ + L+ + ++
Sbjct: 104 EQGRRIIARQADVRDLASLQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDIL 163
Query: 118 EIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVD 177
+ + +G + C L + + G+ GG +I +S+T+ Q H +A+K V
Sbjct: 164 QTNLIGAWHACRAVLPSMIERGQ-------GGSVIFVSSTVGLRGAPGQSHYAASKHGVQ 216
Query: 178 SITRSLALEWGTDYAIRVNGIAPGPI-----KDTAGVSKLAPEEIRSKATDYMAAYK--- 229
+ SLA E G + IRVN + PG + + + P D +
Sbjct: 217 GLMLSLANEVGR-HNIRVNSVNPGAVNTEMALNEKLLKMFLPHLENPTREDAAELFSQLT 275
Query: 230 -----FGEKWDIAMAALYLASDAG 248
+ E D++ A +LASD
Sbjct: 276 LLPIPWVEPEDVSNAVAWLASDEA 299
|
| >3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} Length = 267 | Back alignment and structure |
|---|
Score = 146 bits (371), Expect = 2e-43
Identities = 60/254 (23%), Positives = 99/254 (38%), Gaps = 30/254 (11%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAI--GLE 67
LKGK AL+TG +GIG I+ L GA + I GRR+ + + + + AI +
Sbjct: 8 LKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVV 67
Query: 68 GDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIM 127
D+ + V+E + K+DIL+N V D+ + + E++ + +
Sbjct: 68 ADLGTEQGCQDVIE----KYPKVDILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRL 123
Query: 128 CHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEW 187
LK + + G+ +I I++ + H SA K S++RSLA
Sbjct: 124 TRSYLKKMIERKEGR--------VIFIASEAAIMPSQEMAHYSATKTMQLSLSRSLAELT 175
Query: 188 GTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK--------------FGEK 233
+ VN I PG T GV + ++ A K
Sbjct: 176 TG-TNVTVNTIMPGST-LTEGVETMLNSLYPNEQLTIEEAEKRFMKENRPTSIIQRLIRP 233
Query: 234 WDIAMAALYLASDA 247
+IA +L+S
Sbjct: 234 EEIAHLVTFLSSPL 247
|
| >1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* Length = 254 | Back alignment and structure |
|---|
Score = 146 bits (370), Expect = 2e-43
Identities = 45/241 (18%), Positives = 78/241 (32%), Gaps = 18/241 (7%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHS-LGIPAIGLEG 68
L K + GIG + S +L K ++ R + +
Sbjct: 3 LTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTY 62
Query: 69 DV-RKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIM 127
DV ++ ++++ + +DIL+N A ++ I I+ G
Sbjct: 63 DVTVPVAESKKLLKKIFDQLKTVDILINGAG---ILDDHQ-----IERTIAINFTGLVNT 114
Query: 128 CHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEW 187
L + K G GGII NI + + A SA+KAAV S T SLA
Sbjct: 115 TTAILDFWDKRKGG-----PGGIIANICSVTGFNAIHQVPVYSASKAAVVSFTNSLAKLA 169
Query: 188 GTDYAIRVNGIAPGPIKDTAGVSKL-APEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246
+ I PG T V + ++ + + + ++ +
Sbjct: 170 PI-TGVTAYSINPGIT-RTPLVHTFNSWLDVEPRVAELLLSHPTQTSEQCGQNFVKAIEA 227
Query: 247 A 247
Sbjct: 228 N 228
|
| >2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* Length = 277 | Back alignment and structure |
|---|
Score = 147 bits (372), Expect = 3e-43
Identities = 65/254 (25%), Positives = 112/254 (44%), Gaps = 30/254 (11%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
+VAL+TG SGIG EI+ +LGK G + + R + LR+ + L G+ A G D
Sbjct: 20 QDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCD 79
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAA---AGNFLVPAEDLSPNGFRTVIEIDSVGTFI 126
VR + +V + + +G +D+LVN A G +L+ + V+E + G F
Sbjct: 80 VRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATA---ELADELWLDVVETNLTGVFR 136
Query: 127 MCHEALKYL----KKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRS 182
+ + LK + GR I+NI++T + SA+K V T++
Sbjct: 137 VTKQVLKAGGMLERGTGR----------IVNIASTGGKQGVVHAAPYSASKHGVVGFTKA 186
Query: 183 LALEWGTDYAIRVNGIAPGPI---------KDTAGVSKLAPEEIRSKATDYMAAYKFGEK 233
L LE I VN + PG + + + + +++ EE + T + ++ +
Sbjct: 187 LGLELAR-TGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQP 245
Query: 234 WDIAMAALYLASDA 247
++A YL
Sbjct: 246 SEVAEMVAYLIGPG 259
|
| >2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} Length = 260 | Back alignment and structure |
|---|
Score = 146 bits (370), Expect = 3e-43
Identities = 57/250 (22%), Positives = 102/250 (40%), Gaps = 23/250 (9%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL--GIPAIGLE 67
++GK+A++T G SG+GF +L+L ++GA + + R + L +A + + SL G +
Sbjct: 5 IQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVA 64
Query: 68 GDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIM 127
GD+R+ D R+ E G DILV + G +L + + + +
Sbjct: 65 GDIREPGDIDRLFE-KARDLGGADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWV 123
Query: 128 CHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEW 187
A + + + G G ++ I + + + V + R+LALE
Sbjct: 124 GRRAAEQMVEKG--------WGRMVYIGSVTLLRPWQDLALSNIMRLPVIGVVRTLALEL 175
Query: 188 GTDYAIRVNGIAPGPIKDTAGVSKLA----------PEEIRSKATDYMAAYKFGEKWDIA 237
+ VN + P I T V LA EE + + G+ ++A
Sbjct: 176 APH-GVTVNAVLPSLI-LTDRVRSLAEERARRSGITVEEALKSMASRIPMGRVGKPEELA 233
Query: 238 MAALYLASDA 247
+LAS+
Sbjct: 234 SVVAFLASEK 243
|
| >3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} Length = 264 | Back alignment and structure |
|---|
Score = 146 bits (370), Expect = 3e-43
Identities = 56/246 (22%), Positives = 99/246 (40%), Gaps = 22/246 (8%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR-KTVLRSAVAALHSLGIPAIGLEG 68
+ AL+T G G+G +++ +L G ++ + T + + + ++
Sbjct: 5 RFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQA 64
Query: 69 DVRKREDAVRVVESTINHFGKLDILVNAAAG-----NFLVPAEDLSPNGFRTVIEIDSVG 123
DV K+ED ++VE ++HFGK+D L+N A LV D + + +I+ +
Sbjct: 65 DVTKKEDLHKIVEEAMSHFGKIDFLINNAGPYVFERKKLV---DYEEDEWNEMIQGNLTA 121
Query: 124 TFIMCHEALKYLKKGGRGQASSSSGGIIINISAT--LHYTATWYQIHVSAAKAAVDSITR 181
F + + ++K G+ IIN Y+ +AAK + S+T+
Sbjct: 122 VFHLLKLVVPVMRKQNFGR--------IINYGFQGADSAPGWIYRSAFAAAKVGLVSLTK 173
Query: 182 SLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAAL 241
++A E Y I N + PG I +E R + G DIA
Sbjct: 174 TVAYEEAE-YGITANMVCPGDI-IGEMKEAT-IQEARQLKEHNTPIGRSGTGEDIARTIS 230
Query: 242 YLASDA 247
+L D
Sbjct: 231 FLCEDD 236
|
| >1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* Length = 254 | Back alignment and structure |
|---|
Score = 145 bits (367), Expect = 6e-43
Identities = 39/242 (16%), Positives = 83/242 (34%), Gaps = 22/242 (9%)
Query: 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK 72
A++T G +L+L + G +A A +
Sbjct: 2 STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFA------ETYPQLKPMS 55
Query: 73 REDAVRVVESTINHFGKLDILVNAAAGNF-LVPAEDLSPNGFRTVIEIDSVGTFIMCHEA 131
++ ++E+ + +G++D+LV+ P + + +R +E + F + +
Sbjct: 56 EQEPAELIEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAV 115
Query: 132 LKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDY 191
+KK G II I++ + ++A+A ++ +L+ E G Y
Sbjct: 116 ASQMKKRKSGH--------IIFITSATPFGPWKELSTYTSARAGACTLANALSKELGE-Y 166
Query: 192 AIRVNGIAPGPI------KDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245
I V I P + E + A + G + ++ +LAS
Sbjct: 167 NIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQRLGTQKELGELVAFLAS 226
Query: 246 DA 247
+
Sbjct: 227 GS 228
|
| >1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* Length = 241 | Back alignment and structure |
|---|
Score = 144 bits (366), Expect = 7e-43
Identities = 39/240 (16%), Positives = 68/240 (28%), Gaps = 30/240 (12%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
+ + L+ GG +G +A + + SA + +
Sbjct: 5 GEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEASASVI--------VKMTDS 56
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLV-PAEDLSPNGFRTVIEIDSVGTFIMC 128
++ D V + K+D ++ A G + + + I
Sbjct: 57 FTEQADQVTAEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISS 116
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEW- 187
H A K+LK+GG + A T I AK AV + +SLA +
Sbjct: 117 HLATKHLKEGGL----------LTLAGAKAALDGTPGMIGYGMAKGAVHQLCQSLAGKNS 166
Query: 188 GTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247
G + P + DT K PE S + + +
Sbjct: 167 GMPSGAAAIAVLPVTL-DTPMNRKSMPEADFS---------SWTPLEFLVETFHDWITGN 216
|
| >1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* Length = 276 | Back alignment and structure |
|---|
Score = 145 bits (368), Expect = 1e-42
Identities = 52/256 (20%), Positives = 96/256 (37%), Gaps = 24/256 (9%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR-KTVLRSAVAALHSL-GIPAIGLE 67
+ A++TGG IG I+++L + G + + R + + VA L++ A+ +
Sbjct: 9 SECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCK 68
Query: 68 GDVRKREDAV----RVVESTINHFGKLDILVNAA-----------AGNFLVPAEDLSPNG 112
GD+ + +++ + FG+ D+LVN A
Sbjct: 69 GDLSLSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQ 128
Query: 113 FRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAA 172
+ ++V + + +GG ++ + S ++N+ + + A
Sbjct: 129 VAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLS---VVNLCDAMTDLPLPGFCVYTMA 185
Query: 173 KAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGE 232
K A+ +TR+ ALE IRVN +APG + + EE R K
Sbjct: 186 KHALGGLTRAAALELA-PRHIRVNAVAPGLSLLPPAMPQETQEEYRRKV---PLGQSEAS 241
Query: 233 KWDIAMAALYLASDAG 248
IA A +L S
Sbjct: 242 AAQIADAIAFLVSKDA 257
|
| >3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} Length = 293 | Back alignment and structure |
|---|
Score = 145 bits (368), Expect = 1e-42
Identities = 66/247 (26%), Positives = 96/247 (38%), Gaps = 27/247 (10%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAAL-HSLGIPAIGLEG 68
L + L+TGG GIG I+ + GA +A+ R L S A L IG+
Sbjct: 39 LSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRL 98
Query: 69 DVRKREDAVRVVESTINHFGKLDILVNAAAG----NFLVPAEDLSPNGFRTVIEIDSVGT 124
DV + ++ FG LD++ AG L ++P V++++ GT
Sbjct: 99 DVSDPGSCADAARTVVDAFGALDVVCA-NAGIFPEARLD---TMTPEQLSEVLDVNVKGT 154
Query: 125 FIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY----QIHVSAAKAAVDSIT 180
L L GRG+ +I S+ T H A+KAA
Sbjct: 155 VYTVQACLAPLTASGRGR--------VILTSSI---TGPVTGYPGWSHYGASKAAQLGFM 203
Query: 181 RSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAA 240
R+ A+E + VN I PG I T G+ + EE S + G DI A
Sbjct: 204 RTAAIELAP-RGVTVNAILPGNI-LTEGLVDM-GEEYISGMARSIPMGMLGSPVDIGHLA 260
Query: 241 LYLASDA 247
+LA+D
Sbjct: 261 AFLATDE 267
|
| >3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} Length = 255 | Back alignment and structure |
|---|
Score = 143 bits (363), Expect = 3e-42
Identities = 73/246 (29%), Positives = 107/246 (43%), Gaps = 18/246 (7%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIM-GRRKTVLRSAVAALHSLGIPAIGLEG 68
LKGKVAL+TG GIG I+ +L GA +AI G RK V + S G A +
Sbjct: 5 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGA 64
Query: 69 DVRKREDAVRVVESTINHF------GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV 122
++ + S N K DIL+N A E+ + F ++ +++
Sbjct: 65 NLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAK 124
Query: 123 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRS 182
F + +AL L+ R IINIS+ + I S K A++++T +
Sbjct: 125 APFFIIQQALSRLRDNSR----------IINISSAATRISLPDFIAYSMTKGAINTMTFT 174
Query: 183 LALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALY 242
LA + G I VN I PG +K L+ ++ AT A + GE DIA A +
Sbjct: 175 LAKQLG-ARGITVNAILPGFVKTDMNAELLSDPMMKQYATTISAFNRLGEVEDIADTAAF 233
Query: 243 LASDAG 248
LAS
Sbjct: 234 LASPDS 239
|
| >3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} Length = 278 | Back alignment and structure |
|---|
Score = 143 bits (364), Expect = 3e-42
Identities = 62/262 (23%), Positives = 99/262 (37%), Gaps = 36/262 (13%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIM------------GRRKTVLRSAVAALH 57
L GKVA +TG G G +++L GA I + L + V +
Sbjct: 11 LTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVE 70
Query: 58 SLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVI 117
+G + + DVR RE +++ ++ G+LDI+V A + +G+ VI
Sbjct: 71 DIGSRIVARQADVRDRESLSAALQAGLDELGRLDIVVANAG----IAPMSAGDDGWHDVI 126
Query: 118 EIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL----HYTATWYQIHVSAAK 173
+++ G + A+ L K G GG I+ IS++ +A + AAK
Sbjct: 127 DVNLTGVYHTIKVAIPTLVKQGT-------GGSIVLISSSAGLAGVGSADPGSVGYVAAK 179
Query: 174 AAVDSITRSLALEWGTDYAIRVNGIAPGPI-----KDTAGVSKLAPEEIRSKATDYMAAY 228
V + R A IRVN I P + + LA + M
Sbjct: 180 HGVVGLMRVYANLLAG-QMIRVNSIHPSGVETPMINNEFTREWLAKMAAATDTPGAMGNA 238
Query: 229 ---KFGEKWDIAMAALYLASDA 247
+ D+A A +L SD
Sbjct: 239 MPVEVLAPEDVANAVAWLVSDQ 260
|
| >2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} Length = 250 | Back alignment and structure |
|---|
Score = 141 bits (359), Expect = 1e-41
Identities = 51/246 (20%), Positives = 90/246 (36%), Gaps = 27/246 (10%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
GK +TG G GIG+ +L + GA + + A P D
Sbjct: 5 FSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQ----------AFTQEQYPFATEVMD 54
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
V +V + + +LD LVNAA + + LS ++ ++ G F +
Sbjct: 55 VADAAQVAQVCQRLLAETERLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQ 114
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
+ + ++ GG I+ +++ +T A+KAA+ S+ S+ LE
Sbjct: 115 QTMNQFRRQR--------GGAIVTVASDAAHTPRIGMSAYGASKAALKSLALSVGLELAG 166
Query: 190 DYAIRVNGIAPGPIK--------DTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAAL 241
+R N ++PG + + + + K +IA L
Sbjct: 167 -SGVRCNVVSPGSTDTDMQRTLWVSDDAEEQRIRGFGEQFKLGIPLGKIARPQEIANTIL 225
Query: 242 YLASDA 247
+LASD
Sbjct: 226 FLASDL 231
|
| >2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... Length = 288 | Back alignment and structure |
|---|
Score = 142 bits (361), Expect = 1e-41
Identities = 53/259 (20%), Positives = 97/259 (37%), Gaps = 24/259 (9%)
Query: 6 KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAA--LHSLGIPA 63
+G ++ A++TG IG I+++L + G + I ++A A
Sbjct: 17 RGSHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTA 76
Query: 64 IGLEGDVRKRE----DAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLS---------- 109
+ + D+ ++ S FG+ D+LVN A+ + P
Sbjct: 77 VVCQADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTV 136
Query: 110 PNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHV 169
+I +++ F++ + K +SS I+N+ +
Sbjct: 137 ETQVAELIGTNAIAPFLLTMSFAQRQKG--TNPNCTSSNLSIVNLCDAMVDQPCMAFSLY 194
Query: 170 SAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK 229
+ K A+ +T+S ALE Y IRVNG+APG + EE + K + +
Sbjct: 195 NMGKHALVGLTQSAALELA-PYGIRVNGVAPGVSLLPVAM----GEEEKDKWRRKVPLGR 249
Query: 230 F-GEKWDIAMAALYLASDA 247
IA A ++L S +
Sbjct: 250 REASAEQIADAVIFLVSGS 268
|
| >2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 Length = 285 | Back alignment and structure |
|---|
Score = 140 bits (354), Expect = 1e-40
Identities = 73/244 (29%), Positives = 113/244 (46%), Gaps = 23/244 (9%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
+ KVAL+TG G GIG EI+ L K + + + R + S V + S G + G GD
Sbjct: 42 GENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGD 101
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAG----NFLVPAEDLSPNGFRTVIEIDSVGTF 125
V K+E+ V+ + +DILVN AG N + + + + V+ + F
Sbjct: 102 VSKKEEISEVINKILTEHKNVDILVN-NAGITRDNLFL---RMKNDEWEDVLRTNLNSLF 157
Query: 126 IMCHEALKYL--KKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSL 183
+ K + + GR IINIS+ + T Q + S++KA V T+SL
Sbjct: 158 YITQPISKRMINNRYGR----------IINISSIVGLTGNVGQANYSSSKAGVIGFTKSL 207
Query: 184 ALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYL 243
A E + I VN IAPG I + K+ E+I+ + A + G ++A A +L
Sbjct: 208 AKELAS-RNITVNAIAPGFI-SSDMTDKI-SEQIKKNIISNIPAGRMGTPEEVANLACFL 264
Query: 244 ASDA 247
+SD
Sbjct: 265 SSDK 268
|
| >3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} Length = 270 | Back alignment and structure |
|---|
Score = 138 bits (351), Expect = 2e-40
Identities = 72/245 (29%), Positives = 113/245 (46%), Gaps = 23/245 (9%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L +VA++TG GIG I+L+L + GA + + AA G+ G +
Sbjct: 26 LDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLN 85
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAG----NFLVPAEDLSPNGFRTVIEIDSVGTF 125
V +VEST+ FG L++LVN AG + + + + VI+ + F
Sbjct: 86 VNDATAVDALVESTLKEFGALNVLVN-NAGITQDQLAM---RMKDDEWDAVIDTNLKAVF 141
Query: 126 IMCHEALKYL--KKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSL 183
+ L+ + +GGR I+NI++ + Q++ +AAKA V +TR+L
Sbjct: 142 RLSRAVLRPMMKARGGR----------IVNITSVVGSAGNPGQVNYAAAKAGVAGMTRAL 191
Query: 184 ALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYL 243
A E G+ I VN +APG I DT L P+E ++ + + G DIA A +L
Sbjct: 192 AREIGS-RGITVNCVAPGFI-DTDMTKGL-PQEQQTALKTQIPLGRLGSPEDIAHAVAFL 248
Query: 244 ASDAG 248
AS
Sbjct: 249 ASPQA 253
|
| >3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} Length = 281 | Back alignment and structure |
|---|
Score = 138 bits (351), Expect = 3e-40
Identities = 60/264 (22%), Positives = 103/264 (39%), Gaps = 34/264 (12%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTV------------LRSAVAALH 57
+GK AL+TGG G+G ++ L + GA IAI R + L VA +
Sbjct: 8 FEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVE 67
Query: 58 SLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVI 117
G I + DV+ R V + G +DI + A + + ++ + VI
Sbjct: 68 KTGRRCISAKVDVKDRAALESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVI 127
Query: 118 EIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVD 177
+ GTF + K G I+ +S+ L ++A + Q ++K V
Sbjct: 128 GTNLTGTFNTIAAVAPGMIKRN--------YGRIVTVSSMLGHSANFAQASYVSSKWGVI 179
Query: 178 SITRSLALEWGTDYAIRVNGIAPGPI-----KDTAGVSKLAPEEIRSKATDYMAAY---- 228
+T+ A + Y I VN +APG I + + P+ + D + +
Sbjct: 180 GLTKCAAHDLVG-YGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLKDVESVFASLH 238
Query: 229 ----KFGEKWDIAMAALYLASDAG 248
F + ++ A L+L +A
Sbjct: 239 LQYAPFLKPEEVTRAVLFLVDEAS 262
|
| >2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 Length = 244 | Back alignment and structure |
|---|
Score = 137 bits (348), Expect = 3e-40
Identities = 42/241 (17%), Positives = 80/241 (33%), Gaps = 27/241 (11%)
Query: 13 KVALLTGGGSGIGFEISLQLGKHGA-------AIAIMGRRKTVLRSAVAALHSLGIPAIG 65
+ L+TG G GIG I+L+ + + + R L + G
Sbjct: 3 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDT 62
Query: 66 LEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTF 125
+ D+ D R+ + +G +D LVN A DL+ F + + GTF
Sbjct: 63 ITADISDMADVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTF 122
Query: 126 IMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLAL 185
+ +++ G I I++ A + +K + ++ L
Sbjct: 123 FLTQALFALMERQHSGH--------IFFITSVAATKAFRHSSIYCMSKFGQRGLVETMRL 174
Query: 186 EWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245
+R+ + PG + T K+ +E+++ DIA +
Sbjct: 175 YAR-KCNVRITDVQPGAV-YTPMWGKV-DDEMQALM---------MMPEDIAAPVVQAYL 222
Query: 246 D 246
Sbjct: 223 Q 223
|
| >2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} Length = 247 | Back alignment and structure |
|---|
Score = 137 bits (348), Expect = 4e-40
Identities = 68/246 (27%), Positives = 117/246 (47%), Gaps = 24/246 (9%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR-KTVLRSAVAALHSLGIPAIGLEG 68
LKGK A++TG G+G I+ +LG GA I + G T L + + GI + +G
Sbjct: 3 LKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKG 62
Query: 69 DVRKREDAVRVVESTINHFGKLDILVNAAAG----NFLVPAEDLSPNGFRTVIEIDSVGT 124
DV+ ED +V++ ++ FG++DILVN AG ++ +S + V+ +
Sbjct: 63 DVKNPEDVENMVKTAMDAFGRIDILVN-NAGITRDTLML---KMSEKDWDDVLNTNLKSA 118
Query: 125 FIMCHEALKYL--KKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRS 182
++ K + +K G+ IINI++ Q + +A+KA + T+S
Sbjct: 119 YLCTKAVSKIMLKQKSGK----------IINITSIAGIIGNAGQANYAASKAGLIGFTKS 168
Query: 183 LALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALY 242
+A E+ I N +APG I T L P++++ + + +FG ++A +
Sbjct: 169 IAKEFAA-KGIYCNAVAPGII-KTDMTDVL-PDKVKEMYLNNIPLKRFGTPEEVANVVGF 225
Query: 243 LASDAG 248
LASD
Sbjct: 226 LASDDS 231
|
| >3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} PDB: 3sj7_A* Length = 246 | Back alignment and structure |
|---|
Score = 136 bits (346), Expect = 9e-40
Identities = 66/247 (26%), Positives = 114/247 (46%), Gaps = 24/247 (9%)
Query: 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAI-MGRRKTVLRSAVAALHSLGIPAIGLE 67
+ K AL+TG GIG I+LQL + G +A+ K + V + + G+ + ++
Sbjct: 1 MKMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQ 60
Query: 68 GDVRKREDAVRVVESTINHFGKLDILVNAAAG----NFLVPAEDLSPNGFRTVIEIDSVG 123
+V ++ +++ ++ FG LD+LVN AG N L+ + + VI+ + G
Sbjct: 61 ANVADADEVKAMIKEVVSQFGSLDVLVN-NAGITRDNLLM---RMKEQEWDDVIDTNLKG 116
Query: 124 TFIMCHEALKYL--KKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITR 181
F +A + ++ G IIN+S+ + Q + A KA V +T+
Sbjct: 117 VFNCIQKATPQMLRQRSGA----------IINLSSVVGAVGNPGQANYVATKAGVIGLTK 166
Query: 182 SLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAAL 241
S A E + I VN +APG I + L +E++ + + +FG+ DIA
Sbjct: 167 SAARELAS-RGITVNAVAPGFI-VSDMTDAL-SDELKEQMLTQIPLARFGQDTDIANTVA 223
Query: 242 YLASDAG 248
+LASD
Sbjct: 224 FLASDKA 230
|
| >2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} Length = 246 | Back alignment and structure |
|---|
Score = 136 bits (345), Expect = 1e-39
Identities = 82/247 (33%), Positives = 122/247 (49%), Gaps = 24/247 (9%)
Query: 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAI-MGRRKTVLRSAVAALHSLGIPAIGLE 67
+LKGKVAL+TG GIG I++ L K GA + + + V + LG AI +
Sbjct: 1 MLKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVR 60
Query: 68 GDVRKREDAVRVVESTINHFGKLDILVNAAAG----NFLVPAEDLSPNGFRTVIEIDSVG 123
DV ED +V+ T++ FG++DILVN AG N L+ + + TVI + G
Sbjct: 61 ADVANAEDVTNMVKQTVDVFGQVDILVN-NAGVTKDNLLM---RMKEEEWDTVINTNLKG 116
Query: 124 TFIMCHEALKYL--KKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITR 181
F+ +++ ++ GR I+NI++ + T Q + AAKA V +T+
Sbjct: 117 VFLCTKAVSRFMMRQRHGR----------IVNIASVVGVTGNPGQANYVAAKAGVIGLTK 166
Query: 182 SLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAAL 241
+ A E + I VN IAPG I T L E I+++ + A +FGE DIA A
Sbjct: 167 TSAKELAS-RNITVNAIAPGFI-ATDMTDVL-DENIKAEMLKLIPAAQFGEAQDIANAVT 223
Query: 242 YLASDAG 248
+ ASD
Sbjct: 224 FFASDQS 230
|
| >3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} Length = 247 | Back alignment and structure |
|---|
Score = 135 bits (343), Expect = 2e-39
Identities = 71/244 (29%), Positives = 108/244 (44%), Gaps = 23/244 (9%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L KVAL+TG GIGFE++ L GA + + ++ G A GL +
Sbjct: 3 LNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLN 62
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAG----NFLVPAEDLSPNGFRTVIEIDSVGTF 125
+ E +DILVN AG N ++ +S + +++VI + F
Sbjct: 63 ISDIESIQNFFAEIKAENLAIDILVN-NAGITRDNLMM---RMSEDEWQSVINTNLSSIF 118
Query: 126 IMCHEALKYL--KKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSL 183
M E ++ + K+ GR II+I + + Q + AAKA V ++SL
Sbjct: 119 RMSKECVRGMMKKRWGR----------IISIGSVVGSAGNPGQTNYCAAKAGVIGFSKSL 168
Query: 184 ALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYL 243
A E + I VN +APG I T KL +E +S + + + GE DIA A +L
Sbjct: 169 AYEVAS-RNITVNVVAPGFI-ATDMTDKL-TDEQKSFIATKIPSGQIGEPKDIAAAVAFL 225
Query: 244 ASDA 247
AS+
Sbjct: 226 ASEE 229
|
| >2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} Length = 264 | Back alignment and structure |
|---|
Score = 135 bits (342), Expect = 5e-39
Identities = 69/250 (27%), Positives = 115/250 (46%), Gaps = 26/250 (10%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIP------- 62
L+ +AL+TG GSGIG +S++L GA +A + + V L G
Sbjct: 5 LRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGN 64
Query: 63 AIGLEGDVRKREDAVRVVESTINHFGK-LDILVNAAAG----NFLVPAEDLSPNGFRTVI 117
+ DV + A ++E F + ++V+ AG FL+ +S + + VI
Sbjct: 65 HAAFQADVSEARAARCLLEQVQACFSRPPSVVVS-CAGITQDEFLL---HMSEDDWDKVI 120
Query: 118 EIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVD 177
++ GTF++ A + L G G IINIS+ + Q + +A+KA V
Sbjct: 121 AVNLKGTFLVTQAAAQALVSNGC-------RGSIINISSIVGKVGNVGQTNYAASKAGVI 173
Query: 178 SITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIA 237
+T++ A E G + IR N + PG I T K+ P+++ K T+ + G+ D+A
Sbjct: 174 GLTQTAARELGR-HGIRCNSVLPGFI-ATPMTQKV-PQKVVDKITEMIPMGHLGDPEDVA 230
Query: 238 MAALYLASDA 247
+LAS+
Sbjct: 231 DVVAFLASED 240
|
| >2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* Length = 248 | Back alignment and structure |
|---|
Score = 134 bits (339), Expect = 9e-39
Identities = 69/245 (28%), Positives = 120/245 (48%), Gaps = 24/245 (9%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAAL-HSLGIPAIGLEG 68
L+GKV+L+TG GIG I+ +L G+ + I G ++ + + G+ A G+E
Sbjct: 5 LQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEM 64
Query: 69 DVRKREDAVRVVESTINHFGKLDILVNAAAG----NFLVPAEDLSPNGFRTVIEIDSVGT 124
++ E + E N +DILVN AG + +S + V++++ GT
Sbjct: 65 NLLSEESINKAFEEIYNLVDGIDILVN-NAGITRDKLFL---RMSLLDWEEVLKVNLTGT 120
Query: 125 FIMCHEALKYL--KKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRS 182
F++ +L+ + ++ GR I+NIS+ + +T Q++ S KA + T+S
Sbjct: 121 FLVTQNSLRKMIKQRWGR----------IVNISSVVGFTGNVGQVNYSTTKAGLIGFTKS 170
Query: 183 LALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALY 242
LA E + VN +APG I +T + L EEI+ K + + +FG ++A L+
Sbjct: 171 LAKELAP-RNVLVNAVAPGFI-ETDMTAVL-SEEIKQKYKEQIPLGRFGSPEEVANVVLF 227
Query: 243 LASDA 247
L S+
Sbjct: 228 LCSEL 232
|
| >1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* Length = 291 | Back alignment and structure |
|---|
Score = 135 bits (341), Expect = 1e-38
Identities = 42/273 (15%), Positives = 85/273 (31%), Gaps = 41/273 (15%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAI-------------------MGRRKTVLR 50
VAL+TG +G I+ L G A+ + ++
Sbjct: 7 PTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQ 66
Query: 51 SAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVN--------------A 96
+ ++ + + + V +V + H+G+ D+LVN
Sbjct: 67 ADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDE 126
Query: 97 AAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISA 156
V + + +++ + + + + IIN+
Sbjct: 127 DGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAG--TPAKHRGTNYSIINMVD 184
Query: 157 TLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEE 216
+ + AK A++ +TRS ALE IRVNG+ PG + P
Sbjct: 185 AMTNQPLLGYTIYTMAKGALEGLTRSAALELA-PLQIRVNGVGPGLSVLVDDM----PPA 239
Query: 217 IRSKATDYMAAYK-FGEKWDIAMAALYLASDAG 248
+ + Y+ +++ ++L S
Sbjct: 240 VWEGHRSKVPLYQRDSSAAEVSDVVIFLCSSKA 272
|
| >2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 Length = 328 | Back alignment and structure |
|---|
Score = 136 bits (343), Expect = 1e-38
Identities = 43/273 (15%), Positives = 86/273 (31%), Gaps = 41/273 (15%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAI-------------------MGRRKTVLR 50
VAL+TG +G I+ L G A+ + ++
Sbjct: 44 PTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQ 103
Query: 51 SAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAA------------- 97
+ ++ + + + V +V + H+G+ D+LVN A
Sbjct: 104 ADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDE 163
Query: 98 -AGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISA 156
V + + +++ + + + + IIN+
Sbjct: 164 DGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAG--TPAKHRGTNYSIINMVD 221
Query: 157 TLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEE 216
+ + AK A++ +TRS ALE IRVNG+ PG + P
Sbjct: 222 AMTNQPLLGYTIYTMAKGALEGLTRSAALELA-PLQIRVNGVGPGLSVLVDDM----PPA 276
Query: 217 IRSKATDYMAAYK-FGEKWDIAMAALYLASDAG 248
+ + Y+ +++ ++L S
Sbjct: 277 VWEGHRSKVPLYQRDSSAAEVSDVVIFLCSSKA 309
|
| >1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 245 | Back alignment and structure |
|---|
Score = 133 bits (337), Expect = 2e-38
Identities = 71/244 (29%), Positives = 113/244 (46%), Gaps = 29/244 (11%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
LK K L+TG GIG K GA + + LR A + A + D
Sbjct: 3 LKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAE-----AVGAHPVVMD 57
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAG----NFLV--PAEDLSPNGFRTVIEIDSVG 123
V R + H G+LD +V+ AG NF P ED + V+ ++ G
Sbjct: 58 VADPASVERGFAEALAHLGRLDGVVH-YAGITRDNFHWKMPLED-----WELVLRVNLTG 111
Query: 124 TFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSL 183
+F++ A + +++ G I+ ++ ++ Q + +A+ A V +TR+L
Sbjct: 112 SFLVAKAASEAMREKNPGS--------IVLTASRVY-LGNLGQANYAASMAGVVGLTRTL 162
Query: 184 ALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYL 243
ALE G + IRVN +APG I +T +K+ PE++R KA + G+ ++A AAL+L
Sbjct: 163 ALELGR-WGIRVNTLAPGFI-ETRMTAKV-PEKVREKAIAATPLGRAGKPLEVAYAALFL 219
Query: 244 ASDA 247
SD
Sbjct: 220 LSDE 223
|
| >3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} PDB: 3rsh_A* 3rro_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E Length = 248 | Back alignment and structure |
|---|
Score = 133 bits (336), Expect = 3e-38
Identities = 69/244 (28%), Positives = 113/244 (46%), Gaps = 26/244 (10%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L+GKVAL+TG GIG I+ L + GA + ++ ++ LG G+ +
Sbjct: 7 LEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDY---LGDNGKGMALN 63
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAG----NFLVPAEDLSPNGFRTVIEIDSVGTF 125
V E V+++ + FG +DILVN AG N L+ + + ++E + F
Sbjct: 64 VTNPESIEAVLKAITDEFGGVDILVN-NAGITRDNLLM---RMKEEEWSDIMETNLTSIF 119
Query: 126 IMCHEALKYL--KKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSL 183
+ L+ + K+ GR IIN+ + + Q + +AAKA V T+S+
Sbjct: 120 RLSKAVLRGMMKKRQGR----------IINVGSVVGTMGNAGQANYAAAKAGVIGFTKSM 169
Query: 184 ALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYL 243
A E + + VN +APG I +T L +E R+ + A + G+ +IA A +L
Sbjct: 170 AREVAS-RGVTVNTVAPGFI-ETDMTKAL-NDEQRTATLAQVPAGRLGDPREIASAVAFL 226
Query: 244 ASDA 247
AS
Sbjct: 227 ASPE 230
|
| >1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 236 | Back alignment and structure |
|---|
Score = 131 bits (331), Expect = 1e-37
Identities = 45/242 (18%), Positives = 74/242 (30%), Gaps = 34/242 (14%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
+ ++ GG +G I K+G + + + I ++G+
Sbjct: 1 MSSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSA----------NDQADSNILVDGN 50
Query: 70 VRKREDAVRVVESTIN--HFGKLDILVNAAAGNFLVPA-EDLSPNGFRTVIEIDSVGTFI 126
E ++E T + ++D + A G A +I+ + I
Sbjct: 51 KNWTEQEQSILEQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAI 110
Query: 127 MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALE 186
A +LK GG + A T I AKAAV +T SLA +
Sbjct: 111 AAKLATTHLKPGGL----------LQLTGAAAAMGPTPSMIGYGMAKAAVHHLTSSLAAK 160
Query: 187 W-GTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245
G V I P + DT K P S + I+ L +
Sbjct: 161 DSGLPDNSAVLTIMPVTL-DTPMNRKWMPNADHS---------SWTPLSFISEHLLKWTT 210
Query: 246 DA 247
+
Sbjct: 211 ET 212
|
| >4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* Length = 269 | Back alignment and structure |
|---|
Score = 131 bits (331), Expect = 2e-37
Identities = 70/246 (28%), Positives = 122/246 (49%), Gaps = 27/246 (10%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAI-MGRRKTVLRSAVAALHSLGIPAIGLEG 68
L ++AL+TG GIG I+L+L GA +A+ VAA+ + G A ++
Sbjct: 26 LTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKA 85
Query: 69 DVRKREDAVRVVESTINHFGKLDILVNAAAG----NFLVPAEDLSPNGFRTVIEIDSVGT 124
DV + + + + I +G+LD+LVN AG L+ + + +++V++++ G
Sbjct: 86 DVSQESEVEALFAAVIERWGRLDVLVN-NAGITRDTLLL---RMKRDDWQSVLDLNLGGV 141
Query: 125 FIMCHEALKYL--KKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRS 182
F+ A K + ++ GR IINI++ + Q + SAAKA V +T++
Sbjct: 142 FLCSRAAAKIMLKQRSGR----------IINIASVVGEMGNPGQANYSAAKAGVIGLTKT 191
Query: 183 LALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALY 242
+A E + I VN +APG I T S+LA E++ + ++GE ++A +
Sbjct: 192 VAKELAS-RGITVNAVAPGFI-ATDMTSELAAEKLLEV----IPLGRYGEAAEVAGVVRF 245
Query: 243 LASDAG 248
LA+D
Sbjct: 246 LAADPA 251
|
| >3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A Length = 266 | Back alignment and structure |
|---|
Score = 130 bits (330), Expect = 3e-37
Identities = 65/244 (26%), Positives = 104/244 (42%), Gaps = 26/244 (10%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L G+ AL+TG GIG I+ GA + + G R+ L+ A LG +
Sbjct: 25 LTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAAD---LGKDVFVFSAN 81
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAG----NFLVPAEDLSPNGFRTVIEIDSVGTF 125
+ R+ ++ E +DILVN AG V + + V+ ++
Sbjct: 82 LSDRKSIKQLAEVAEREMEGIDILVN-NAGITRDGLFV---RMQDQDWDDVLAVNLTAAS 137
Query: 126 IMCHEALKYL--KKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSL 183
+ E + + ++ GR IINI++ + Q + AAKA + +++L
Sbjct: 138 TLTRELIHSMMRRRYGR----------IINITSIVGVVGNPGQTNYCAAKAGLIGFSKAL 187
Query: 184 ALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYL 243
A E + I VN IAPG I +A KL E+ + + + G +IA A +YL
Sbjct: 188 AQEIAS-RNITVNCIAPGFI-KSAMTDKL-NEKQKEAIMAMIPMKRMGIGEEIAFATVYL 244
Query: 244 ASDA 247
ASD
Sbjct: 245 ASDE 248
|
| >3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} Length = 256 | Back alignment and structure |
|---|
Score = 130 bits (329), Expect = 4e-37
Identities = 58/244 (23%), Positives = 100/244 (40%), Gaps = 20/244 (8%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAI-MGRRKTVLRSAVAALHSLGIPAIGLEG 68
+ ++A +TGG GIG I +L K G + G + +LG EG
Sbjct: 11 MSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEG 70
Query: 69 DVRKREDAVRVVESTINHFGKLDILVNAAAG----NFLVPAEDLSPNGFRTVIEIDSVGT 124
+V + + + G++D+LVN AG ++ ++ VI+ +
Sbjct: 71 NVGDWDSTKQAFDKVKAEVGEIDVLVN-NAGITRDVVFR---KMTREDWQAVIDTNLTSL 126
Query: 125 FIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLA 184
F + + + + + G G+ IINIS+ + Q + S AKA + T SLA
Sbjct: 127 FNVTKQVIDGMVERGWGR--------IINISSVNGQKGQFGQTNYSTAKAGIHGFTMSLA 178
Query: 185 LEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLA 244
E T + VN ++PG I T V + ++ K + + G +I +LA
Sbjct: 179 QEVAT-KGVTVNTVSPGYI-GTDMVKAI-RPDVLEKIVATIPVRRLGSPDEIGSIVAWLA 235
Query: 245 SDAG 248
S+
Sbjct: 236 SEES 239
|
| >2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} Length = 255 | Back alignment and structure |
|---|
Score = 130 bits (328), Expect = 4e-37
Identities = 40/244 (16%), Positives = 76/244 (31%), Gaps = 23/244 (9%)
Query: 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK 72
V +TG SGIG + L + G + + R + A L + G + + +
Sbjct: 2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQA---DIEADLSTPGGRETAVAAVLDR 58
Query: 73 REDAVRVV-----ESTINHFGKLDILVNAAAGNFLVPA--EDLSPNGFRTVIEIDSVGTF 125
+ + L + VN + L+ E LS + + S+
Sbjct: 59 CGGVLDGLVCCAGVGVTAANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAAT 118
Query: 126 IMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLAL 185
L ++ G + + +K AV + R +
Sbjct: 119 QPGAAELPMVEAML--------AGDEARAIELAEQQG-QTHLAYAGSKYAVTCLARRNVV 169
Query: 186 EWGTDYAIRVNGIAPGPIKDTAGVSKLA--PEEIRSKATDYMAAYKFGEKWDIAMAALYL 243
+W +R+N +APG + +T + P S + E ++A A +L
Sbjct: 170 DWA-GRGVRLNVVAPGAV-ETPLLQASKADPRYGESTRRFVAPLGRGSEPREVAEAIAFL 227
Query: 244 ASDA 247
Sbjct: 228 LGPQ 231
|
| >1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* Length = 259 | Back alignment and structure |
|---|
Score = 129 bits (325), Expect = 1e-36
Identities = 46/254 (18%), Positives = 82/254 (32%), Gaps = 26/254 (10%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGK---HGAAIAIMGRRKTVLRSAVAALHSL--GIPAI 64
L V +LTG G G ++ QL + G+ + + R +++LR L + + +
Sbjct: 4 LGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVV 63
Query: 65 GLEGDVRKREDAVRVVESTIN----HFGKLDILVNAAA---GNFLVPAEDLSPNGFRTVI 117
D+ R++ + + +L+N AA
Sbjct: 64 LAAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYW 123
Query: 118 EIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVD 177
++ + L + ++NIS+ A KAA D
Sbjct: 124 ALNLTSMLCLTSGTLNAFQDSP------GLSKTVVNISSLCALQPYKGWGLYCAGKAARD 177
Query: 178 SITRSLALEWGTDYAIRVNGIAPGPIKDT----AGVSKLAPEEIRSKATDYMAAYKFGEK 233
+ + LA E + ++RV APGP+ D E+RSK + +
Sbjct: 178 MLYQVLAAE---EPSVRVLSYAPGPL-DNDMQQLARETSKDPELRSKLQKLKSDGALVDC 233
Query: 234 WDIAMAALYLASDA 247
A L L
Sbjct: 234 GTSAQKLLGLLQKD 247
|
| >3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} Length = 269 | Back alignment and structure |
|---|
Score = 128 bits (324), Expect = 3e-36
Identities = 59/247 (23%), Positives = 105/247 (42%), Gaps = 19/247 (7%)
Query: 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMG-RRKTVLRSAVAALHSLGIPAIG 65
G + +VA +TGG G+G IS +L G A+A+ R + + + G
Sbjct: 20 GSMQAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKA 79
Query: 66 LEGDVRKREDAVRVVESTINHFGKLDILVNAAAG----NFLVPAEDLSPNGFRTVIEIDS 121
DV E R E + FGK+D+L+N AG + ++ + V+ D
Sbjct: 80 YAVDVADFESCERCAEKVLADFGKVDVLIN-NAGITRDATFM---KMTKGDWDAVMRTDL 135
Query: 122 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITR 181
F + + + + + G+ I+NI + + Q + ++AKA + T+
Sbjct: 136 DAMFNVTKQFIAGMVERRFGR--------IVNIGSVNGSRGAFGQANYASAKAGIHGFTK 187
Query: 182 SLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAAL 241
+LALE I VN ++PG + TA V + + + +K + + G ++A
Sbjct: 188 TLALETAK-RGITVNTVSPGYL-ATAMVEAVPQDVLEAKILPQIPVGRLGRPDEVAALIA 245
Query: 242 YLASDAG 248
+L SD
Sbjct: 246 FLCSDDA 252
|
| >3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} Length = 301 | Back alignment and structure |
|---|
Score = 129 bits (325), Expect = 4e-36
Identities = 48/195 (24%), Positives = 81/195 (41%), Gaps = 8/195 (4%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
G+ A++TGG SGIG + + + GA + + + L AV L G A G+ D
Sbjct: 29 FDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCD 88
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
VR ++ VR+ + G +D++ + A P ++ + +R VI+ID G+
Sbjct: 89 VRHLDEMVRLADEAFRLLGGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVE 148
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
L L + G GG I ++ AK V + +LA E
Sbjct: 149 AFLPRLLEQGT-------GGHIAFTASFAGLVPNAGLGTYGVAKYGVVGLAETLAREVK- 200
Query: 190 DYAIRVNGIAPGPIK 204
I V+ + P ++
Sbjct: 201 PNGIGVSVLCPMVVE 215
|
| >1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 Length = 249 | Back alignment and structure |
|---|
Score = 127 bits (322), Expect = 4e-36
Identities = 49/238 (20%), Positives = 98/238 (41%), Gaps = 25/238 (10%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
++ K L+ GIG ++ L + GA + I R + +L+ + + D
Sbjct: 17 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGHRY---------VVCD 67
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
+RK ++ ++DILV A G ++L+ F+ I+ + +
Sbjct: 68 LRK------DLDLLFEKVKEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVR 121
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
L +K+ G G+ I+ I++ + ++A+ A+ ++L+ E
Sbjct: 122 NYLPAMKEKGWGR--------IVAITSFSVISPIENLYTSNSARMALTGFLKTLSFEVAP 173
Query: 190 DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247
Y I VN +APG +T V +L EE + + + + + +IA +L S+
Sbjct: 174 -YGITVNCVAPGWT-ETERVKELLSEEKKKQVESQIPMRRMAKPEEIASVVAFLCSEK 229
|
| >3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} Length = 235 | Back alignment and structure |
|---|
Score = 126 bits (320), Expect = 5e-36
Identities = 52/238 (21%), Positives = 87/238 (36%), Gaps = 29/238 (12%)
Query: 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAAL-HSLGIPAIGLEGDV 70
KVA++TG GIG I+ L + G A+A+ R L L G+ DV
Sbjct: 2 MKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDV 61
Query: 71 RKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHE 130
K E + + FG +D++V A + E+LS F +IE++ +G +
Sbjct: 62 SKAESVEEFSKKVLERFGDVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKA 121
Query: 131 ALKYLKKGGRGQASSSSGGIIINI-SATLHYTATW--YQIHVSAAKAAVDSITRSLALEW 187
L LK+ G G ++ + Y + K A ++ R+ +E
Sbjct: 122 FLDSLKRTG--------GLALVTTSDVSARLIPYGGGY----VSTKWAARALVRTFQIE- 168
Query: 188 GTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245
+ +R + PG + DT + + +IA A L
Sbjct: 169 --NPDVRFFELRPGAV-DT---------YFGGSKPGKPKEKGYLKPDEIAEAVRCLLK 214
|
| >3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} Length = 281 | Back alignment and structure |
|---|
Score = 127 bits (322), Expect = 6e-36
Identities = 49/242 (20%), Positives = 90/242 (37%), Gaps = 12/242 (4%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
+G A+++GG G+G +L G + I ++ LG A + +
Sbjct: 28 FEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADE---LGNRAEFVSTN 84
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAA--AGNFLVPAEDLSP---NGFRTVIEIDSVGT 124
V + + +E+ +V + D SP GF I++ GT
Sbjct: 85 VTSEDSVLAAIEAANQLGRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGT 144
Query: 125 FIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLA 184
+ + + + G ++ ++ Y Q +AAKA V +T + A
Sbjct: 145 YNVARLVAASIAA--AEPRENGERGALVLTASIAGYEGQIGQTAYAAAKAGVIGLTIAAA 202
Query: 185 LEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLA 244
+ IRVN IAPG + T + + E + A + + G + A AA +L
Sbjct: 203 RDLS-SAGIRVNTIAPGTM-KTPIMESVGEEALAKFAANIPFPKRLGTPDEFADAAAFLL 260
Query: 245 SD 246
++
Sbjct: 261 TN 262
|
| >2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} Length = 234 | Back alignment and structure |
|---|
Score = 126 bits (319), Expect = 7e-36
Identities = 53/218 (24%), Positives = 89/218 (40%), Gaps = 27/218 (12%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L+TG GIG + L G + +M R + L++ A L A+ L GD
Sbjct: 3 GMKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELEG----ALPLPGD 58
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
VR+ D R V + FG+L LVN A + P +L+ +R V++ + G F+
Sbjct: 59 VREEGDWARAVAAMEEAFGELSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIR 118
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATL-HYT---ATWYQIHVSAAKAAVDSITRSLAL 185
A+ L + G G I+N+ + Y +A+K + + + L
Sbjct: 119 HAVPALLRRGGGT--------IVNVGSLAGKNPFKGGAAY----NASKFGLLGLAGAAML 166
Query: 186 EWGTDYAIRVNGIAPGPI------KDTAGVSKLAPEEI 217
+ + +RV + PG + KL PE++
Sbjct: 167 DLR-EANVRVVNVLPGSVDTGFAGNTPGQAWKLKPEDV 203
|
| >1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G Length = 244 | Back alignment and structure |
|---|
Score = 125 bits (317), Expect = 1e-35
Identities = 66/244 (27%), Positives = 112/244 (45%), Gaps = 25/244 (10%)
Query: 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR-KTVLRSAVAALHSLGIPAIGLEGDVR 71
V ++TG GIG I+L LGK G + + R + + G AI GDV
Sbjct: 2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVS 61
Query: 72 KREDAVRVVESTINHFGKLDILVNAAAG----NFLVPAEDLSPNGFRTVIEIDSVGTFIM 127
K D ++++ I+ +G +D++VN AG L+ + + + VI+++ G F+
Sbjct: 62 KEADVEAMMKTAIDAWGTIDVVVN-NAGITRDTLLI---RMKKSQWDEVIDLNLTGVFLC 117
Query: 128 CHEALKYL--KKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLAL 185
A K + K+ GR IINI++ + Q + +AAKA V +++ A
Sbjct: 118 TQAATKIMMKKRKGR----------IINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAR 167
Query: 186 EWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLA- 244
E + I VN + PG I + +KL E++ K + + G+ ++A +LA
Sbjct: 168 EGAS-RNINVNVVCPGFI-ASDMTAKL-GEDMEKKILGTIPLGRTGQPENVAGLVEFLAL 224
Query: 245 SDAG 248
S A
Sbjct: 225 SPAA 228
|
| >2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} Length = 245 | Back alignment and structure |
|---|
Score = 125 bits (317), Expect = 2e-35
Identities = 68/243 (27%), Positives = 110/243 (45%), Gaps = 25/243 (10%)
Query: 13 KVALLTGGGSGIGFEISLQLGKHGAAIAI-MGRRKTVLRSAVAALHSLGIPAIG-LEGDV 70
+ AL+TG GIG I+L+L + G A+AI G+ + G P + L ++
Sbjct: 2 RKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANL 61
Query: 71 RKREDAVRVVESTINHFGKLDILVNAAAG----NFLVPAEDLSPNGFRTVIEIDSVGTFI 126
+ E A +V G LD LVN AG LV + + V+E + F
Sbjct: 62 LEAEAATALVHQAAEVLGGLDTLVN-NAGITRDTLLV---RMKDEDWEAVLEANLSAVFR 117
Query: 127 MCHEALKYL--KKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLA 184
EA+K + + GR I+NI++ + Q + A+KA + TR++A
Sbjct: 118 TTREAVKLMMKARFGR----------IVNITSVVGILGNPGQANYVASKAGLIGFTRAVA 167
Query: 185 LEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLA 244
E+ I VN +APG I +T +L P+E++ + A +FG ++A A +L
Sbjct: 168 KEYAQ-RGITVNAVAPGFI-ETEMTERL-PQEVKEAYLKQIPAGRFGRPEEVAEAVAFLV 224
Query: 245 SDA 247
S+
Sbjct: 225 SEK 227
|
| >3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} Length = 249 | Back alignment and structure |
|---|
Score = 124 bits (315), Expect = 3e-35
Identities = 73/244 (29%), Positives = 110/244 (45%), Gaps = 30/244 (12%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L GK +L+TG SGIG I+ L K G+ + I G + L+S A L +
Sbjct: 12 LTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNA---LKDNYTIEVCN 68
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAG----NFLVPAEDLSPNGFRTVIEIDSVGTF 125
+ +E+ + I+ LDILV AG + + F VI+I+ F
Sbjct: 69 LANKEE----CSNLISKTSNLDILVC-NAGITSDTLAI---RMKDQDFDKVIDINLKANF 120
Query: 126 IMCHEALKYL--KKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSL 183
I+ EA+K + K+ GR IINIS+ + Q + A+KA + +T+SL
Sbjct: 121 ILNREAIKKMIQKRYGR----------IINISSIVGIAGNPGQANYCASKAGLIGMTKSL 170
Query: 184 ALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYL 243
+ E T I VN +APG I + KL E+ R + +G D+A A +L
Sbjct: 171 SYEVAT-RGITVNAVAPGFI-KSDMTDKL-NEKQREAIVQKIPLGTYGIPEDVAYAVAFL 227
Query: 244 ASDA 247
AS+
Sbjct: 228 ASNN 231
|
| >3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} Length = 202 | Back alignment and structure |
|---|
Score = 122 bits (308), Expect = 1e-34
Identities = 33/193 (17%), Positives = 61/193 (31%), Gaps = 34/193 (17%)
Query: 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVR 71
LL G +G + +L K A + GR + + D+
Sbjct: 3 AMKILLIGASGTLGSAVKERLEK-KAEVITAGRH-----------------SGDVTVDIT 44
Query: 72 KREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEA 131
+ ++ E GK+D +V+A P +L+P I G +
Sbjct: 45 NIDSIKKMYE----QVGKVDAIVSATGSATFSPLTELTPEKNAVTISSKLGGQINLVLLG 100
Query: 132 LKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDY 191
+ L G + + + A AV + +S A+E
Sbjct: 101 IDSLNDKGS----------FTLTTGIMMEDPIVQGASAAMANGAVTAFAKSAAIEMPRG- 149
Query: 192 AIRVNGIAPGPIK 204
IR+N ++P ++
Sbjct: 150 -IRINTVSPNVLE 161
|
| >3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} Length = 319 | Back alignment and structure |
|---|
Score = 125 bits (316), Expect = 1e-34
Identities = 50/197 (25%), Positives = 87/197 (44%), Gaps = 5/197 (2%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL--GIPAIGLE 67
G+ A +TGG +G+G + QL G +AI R+ + A+A L + G +G++
Sbjct: 6 FAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQ 65
Query: 68 GDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIM 127
DV RE + FG + IL N A N P E+ S + + ++ ++ G
Sbjct: 66 LDVASREGFKMAADEVEARFGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNG 125
Query: 128 CHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEW 187
+ + + R +A GG ++N ++ + A + K AV ++ SL
Sbjct: 126 VTTFVPRMVE--RVKAGEQKGGHVVNTASMAAFLAAGSPGIYNTTKFAVRGLSESLHYSL 183
Query: 188 GTDYAIRVNGIAPGPIK 204
Y I V+ + PG +K
Sbjct: 184 L-KYEIGVSVLCPGLVK 199
|
| >3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} Length = 245 | Back alignment and structure |
|---|
Score = 123 bits (310), Expect = 1e-34
Identities = 48/236 (20%), Positives = 91/236 (38%), Gaps = 23/236 (9%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
LK K+A++TG G+G EI L + A+ GR L + I + D
Sbjct: 3 LKKKIAVVTGATGGMGIEIVKDLSRDHIVYAL-GRNPEHLAALAEIEGVEPIES-----D 56
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
+ K V+ + + +D LV+AAA E S + ++++ + +
Sbjct: 57 IVKEVLEEGGVD-KLKNLDHVDTLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSR 115
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
+ L L+ G +I I++ +A+K A+ + + E
Sbjct: 116 QLLPALRAA---------SGCVIYINSGAGNGPHPGNTIYAASKHALRGLADAFRKEEA- 165
Query: 190 DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245
+ IRV+ ++PGP +T + L + + + E +IA A ++
Sbjct: 166 NNGIRVSTVSPGPT-NTPMLQGLMDSQGTN-----FRPEIYIEPKEIANAIRFVID 215
|
| >3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} Length = 257 | Back alignment and structure |
|---|
Score = 123 bits (310), Expect = 2e-34
Identities = 53/241 (21%), Positives = 97/241 (40%), Gaps = 13/241 (5%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
LK +V ++TG SG+G ++ L + GA + + + A LG D
Sbjct: 5 LKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAE---LGAAVRFRNAD 61
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAA----AGNFLVPAEDLSPNGFRTVIEIDSVGTF 125
V DA + FG + LVN A L + + + F + ++ +GTF
Sbjct: 62 VTNEADATAALAFAKQEFGHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTF 121
Query: 126 IMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLAL 185
M A + + + + G+I+N ++ + Q +A+K V ++T A
Sbjct: 122 NMIRLAAEVMSQ--GEPDADGERGVIVNTASIAAFDGQIGQAAYAASKGGVAALTLPAAR 179
Query: 186 EWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK-FGEKWDIAMAALYLA 244
E + IRV IAPG DT ++ + P++++ + G + A ++
Sbjct: 180 ELA-RFGIRVVTIAPGIF-DTPMMAGM-PQDVQDALAASVPFPPRLGRAEEYAALVKHIC 236
Query: 245 S 245
Sbjct: 237 E 237
|
| >1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A Length = 247 | Back alignment and structure |
|---|
Score = 122 bits (309), Expect = 2e-34
Identities = 63/244 (25%), Positives = 100/244 (40%), Gaps = 34/244 (13%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
+ L+TGG GIG I+ +L G +A+ R S G+E D
Sbjct: 13 FVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHR-----GSGAPK------GLFGVEVD 61
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAG----NFLVPAEDLSPNGFRTVIEIDSVGTF 125
V + R + H G +++LV+ AG FL+ ++ F VI + G F
Sbjct: 62 VTDSDAVDRAFTAVEEHQGPVEVLVS-NAGLSADAFLM---RMTEEKFEKVINANLTGAF 117
Query: 126 IMCHEALKYL--KKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSL 183
+ A + + K GR +I I + Q + +A+KA V + RS+
Sbjct: 118 RVAQRASRSMQRNKFGR----------MIFIGSVSGLWGIGNQANYAASKAGVIGMARSI 167
Query: 184 ALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYL 243
A E + N +APG I DT L E I+ A ++ A + G ++A +L
Sbjct: 168 ARELSK-ANVTANVVAPGYI-DTDMTRAL-DERIQQGALQFIPAKRVGTPAEVAGVVSFL 224
Query: 244 ASDA 247
AS+
Sbjct: 225 ASED 228
|
| >2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} Length = 253 | Back alignment and structure |
|---|
Score = 120 bits (304), Expect = 2e-33
Identities = 58/244 (23%), Positives = 99/244 (40%), Gaps = 34/244 (13%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
+ L+TGG GIG I+ G +AI R + ++ D
Sbjct: 19 HMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPEGFL-----------AVKCD 67
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAG----NFLVPAEDLSPNGFRTVIEIDSVGTF 125
+ E + + G +++L+ AG L+ +S F +V+E + GTF
Sbjct: 68 ITDTEQVEQAYKEIEETHGPVEVLIA-NAGVTKDQLLM---RMSEEDFTSVVETNLTGTF 123
Query: 126 IMCHEALKYL--KKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSL 183
+ A + + K GR ++ IS+ + + Q + +A+KA + RSL
Sbjct: 124 RVVKRANRAMLRAKKGR----------VVLISSVVGLLGSAGQANYAASKAGLVGFARSL 173
Query: 184 ALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYL 243
A E G+ I N +APG + DT L +E R+ + ++ +IA +L
Sbjct: 174 ARELGS-RNITFNVVAPGFV-DTDMTKVL-TDEQRANIVSQVPLGRYARPEEIAATVRFL 230
Query: 244 ASDA 247
ASD
Sbjct: 231 ASDD 234
|
| >2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* Length = 247 | Back alignment and structure |
|---|
Score = 120 bits (303), Expect = 2e-33
Identities = 71/240 (29%), Positives = 103/240 (42%), Gaps = 19/240 (7%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L+GKVAL+TG SGIG + L GAA+AI RR LR+ L + G LE D
Sbjct: 5 LQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELD 64
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
V R+ V ST+ G LDILVN A L P ED + +I+ + +G M
Sbjct: 65 VADRQGVDAAVASTVEALGGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTR 124
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATL-HYT---ATWYQIHVSAAKAAVDSITRSLAL 185
AL +L + G ++ +S+ A Y A K V++ + +L
Sbjct: 125 AALPHLLRS---------KGTVVQMSSIAGRVNVRNAAVY----QATKFGVNAFSETLRQ 171
Query: 186 EWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245
E + +RV I PG DT + + ++ + + DIA A Y +
Sbjct: 172 EVT-ERGVRVVVIEPGTT-DTELRGHITHTATKEMYEQRISQIRKLQAQDIAEAVRYAVT 229
|
| >2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* Length = 265 | Back alignment and structure |
|---|
Score = 120 bits (303), Expect = 3e-33
Identities = 53/243 (21%), Positives = 99/243 (40%), Gaps = 15/243 (6%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
+KG VA++TGG SG+G + +L GA+ ++ + + LG + D
Sbjct: 10 VKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKK---LGNNCVFAPAD 66
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAA----AGNFLVPAED--LSPNGFRTVIEIDSVG 123
V +D + FG++D+ VN A A + + F+ V++++ +G
Sbjct: 67 VTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMG 126
Query: 124 TFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSL 183
TF + + + G+IIN ++ + Q SA+K + +T +
Sbjct: 127 TFNVIRLVAGEMGQ--NEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPI 184
Query: 184 ALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK-FGEKWDIAMAALY 242
A + IRV IAPG T ++ L PE++ + + G+ + A
Sbjct: 185 ARDLA-PIGIRVMTIAPGLF-GTPLLTSL-PEKVCNFLASQVPFPSRLGDPAEYAHLVQA 241
Query: 243 LAS 245
+
Sbjct: 242 IIE 244
|
| >1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 Length = 272 | Back alignment and structure |
|---|
Score = 118 bits (298), Expect = 2e-32
Identities = 35/197 (17%), Positives = 67/197 (34%), Gaps = 10/197 (5%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
+ G++ L+TG G GIG + + K + + + K L A LG D
Sbjct: 29 VTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVD 88
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
RED + G + ILVN A + E++ + F
Sbjct: 89 CSNREDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTK 148
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
L + K G I+ +++ + + + + ++K A ++L E
Sbjct: 149 AFLPAMTKNNHGH--------IVTVASAAGHVSVPFLLAYCSSKFAAVGFHKTLTDELAA 200
Query: 190 DYA--IRVNGIAPGPIK 204
++ + P +
Sbjct: 201 LQITGVKTTCLCPNFVN 217
|
| >1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 Length = 279 | Back alignment and structure |
|---|
Score = 117 bits (296), Expect = 4e-32
Identities = 58/241 (24%), Positives = 98/241 (40%), Gaps = 13/241 (5%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIP--AIGLE 67
+ ++AL+TG GIG ++ L + G + R + A S G P I
Sbjct: 30 WRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYR 89
Query: 68 GDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIM 127
D+ ED + + + + +DI +N A S +G++ + ++ + I
Sbjct: 90 CDLSNEEDILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSIC 149
Query: 128 CHEALKYLKKGGRGQASSSSGGIIINISATL-HYTATWYQIHV-SAAKAAVDSITRSLAL 185
EA + +K+ R G IINI++ H H SA K AV ++T L
Sbjct: 150 TREAYQSMKE--RNVDD----GHIININSMSGHRVLPLSVTHFYSATKYAVTALTEGLRQ 203
Query: 186 EWGT-DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLA 244
E IR I+PG + +T + ++ KA K + D+A A +Y+
Sbjct: 204 ELREAQTHIRATCISPGVV-ET-QFAFKLHDKDPEKAAATYEQMKCLKPEDVAEAVIYVL 261
Query: 245 S 245
S
Sbjct: 262 S 262
|
| >3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} Length = 264 | Back alignment and structure |
|---|
Score = 116 bits (294), Expect = 6e-32
Identities = 52/197 (26%), Positives = 84/197 (42%), Gaps = 19/197 (9%)
Query: 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEG 68
++ KV L+TG GIG I+ +LG GA I + RR+ + + + G A+
Sbjct: 1 MVMDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVL 60
Query: 69 DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
DV R ++ ++ +G++D+LVN A L P + + + +I+++ G
Sbjct: 61 DVTDRHSVAAFAQAAVDTWGRIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGI 120
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATL-HYT---ATWYQIHVSAAKAAVDSITRSLA 184
L ++ GQ IINI + A Y A K AV +I+ L
Sbjct: 121 GAVLPIMEAQRSGQ--------IINIGSIGALSVVPTAAVY----CATKFAVRAISDGLR 168
Query: 185 LEWGTDYAIRVNGIAPG 201
E IRV + PG
Sbjct: 169 QE---STNIRVTCVNPG 182
|
| >3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} Length = 257 | Back alignment and structure |
|---|
Score = 115 bits (291), Expect = 1e-31
Identities = 61/242 (25%), Positives = 103/242 (42%), Gaps = 15/242 (6%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
++ VA++TGG SG+G + +L GA + ++ R + LG A D
Sbjct: 7 IRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIR------GEDVVADLGDRARFAAAD 60
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAA----AGNFLVPAEDLSPNGFRTVIEIDSVGTF 125
V ++ G L I+VN A A L S FR +++I+ VG+F
Sbjct: 61 VTDEAAVASALD-LAETMGTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSF 119
Query: 126 IMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLAL 185
+ A + + K ++ G+IIN ++ + Q SA+K V +T +A
Sbjct: 120 NVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQIGQAAYSASKGGVVGMTLPIAR 179
Query: 186 EWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK-FGEKWDIAMAALYLA 244
+ + IRV IAPG DT ++ L PEE R+ + G + A+++
Sbjct: 180 DLA-SHRIRVMTIAPGLF-DTPLLASL-PEEARASLGKQVPHPSRLGNPDEYGALAVHII 236
Query: 245 SD 246
+
Sbjct: 237 EN 238
|
| >1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* Length = 257 | Back alignment and structure |
|---|
Score = 112 bits (282), Expect = 3e-30
Identities = 44/258 (17%), Positives = 79/258 (30%), Gaps = 49/258 (18%)
Query: 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK 72
+ +++G +GIG L G I + R + D+
Sbjct: 2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIR-----------------DAEVIADLST 44
Query: 73 REDAVRVVESTI-NHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEA 131
E + + + +D LV A L P + V+ ++ G +
Sbjct: 45 AEGRKQAIADVLAKCSKGMDGLVLCAG---LGPQTKV----LGNVVSVNYFGATELMDAF 97
Query: 132 LKYLKKGGRG--------------------QASSSSGGIIINISATLHYTATWYQIHVSA 171
L LKKG + + +G + H + +
Sbjct: 98 LPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGNLAYAG 157
Query: 172 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK-LAPEEIRSKATDYMAAYK- 229
+K A+ R A WG + +R+N IAPG +T + L ++
Sbjct: 158 SKNALTVAVRKRAAAWG-EAGVRLNTIAPGAT-ETPLLQAGLQDPRYGESIAKFVPPMGR 215
Query: 230 FGEKWDIAMAALYLASDA 247
E ++A +L S A
Sbjct: 216 RAEPSEMASVIAFLMSPA 233
|
| >3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} Length = 266 | Back alignment and structure |
|---|
Score = 108 bits (272), Expect = 9e-29
Identities = 51/244 (20%), Positives = 91/244 (37%), Gaps = 31/244 (12%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
K+ ++TG SGIG I+ + + G + ++ RR L+ A+ ++L D
Sbjct: 14 SMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLK-ALNLPNTLCAQV-----D 67
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
V + + +G D +VN A L + N ++ + +++ +G
Sbjct: 68 VTDKYTFDTAITRAEKIYGPADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQ 127
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATL-HYT---ATWYQIHVSAAKAAVDSITRSLAL 185
L +K G IINIS+ T Y K AV +I+ ++
Sbjct: 128 AVLAPMKARNCGT--------IINISSIAGKKTFPDHAAY----CGTKFAVHAISENVRE 175
Query: 186 EWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKW----DIAMAAL 241
E +RV IAP + T +S ++I+ + D+A A L
Sbjct: 176 EVA-ASNVRVMTIAPSAV-KTELLSHTTSQQIKDGYDAW---RVDMGGVLAADDVARAVL 230
Query: 242 YLAS 245
+
Sbjct: 231 FAYQ 234
|
| >3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} Length = 322 | Back alignment and structure |
|---|
Score = 108 bits (272), Expect = 2e-28
Identities = 62/256 (24%), Positives = 106/256 (41%), Gaps = 19/256 (7%)
Query: 2 ESPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAI-------AIMGRRKTVLRSA-- 52
+ P ++ G+V ++TG G GIG +L GA + + G + +A
Sbjct: 17 QGPGSMGVVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQS 76
Query: 53 -VAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPN 111
V + + G A+ +V + A ++++ + FG LD+LVN A + S
Sbjct: 77 VVDEITAAGGEAVADGSNVADWDQAAGLIQTAVETFGGLDVLVNNAGIVRDRMIANTSEE 136
Query: 112 GFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSA 171
F VI + G F A Y + G +A + G IIN S+ + Q + SA
Sbjct: 137 EFDAVIAVHLKGHFATMRHAAAYWR--GLSKAGKAVDGRIINTSSGAGLQGSVGQGNYSA 194
Query: 172 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFG 231
AKA + ++T A E G Y + VN IAP T + E + ++ +
Sbjct: 195 AKAGIATLTLVGAAEMGR-YGVTVNAIAPS--ARTRMTETVFAEMMATQD----QDFDAM 247
Query: 232 EKWDIAMAALYLASDA 247
+++ ++L S
Sbjct: 248 APENVSPLVVWLGSAE 263
|
| >1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 242 | Back alignment and structure |
|---|
Score = 105 bits (263), Expect = 1e-27
Identities = 60/240 (25%), Positives = 98/240 (40%), Gaps = 23/240 (9%)
Query: 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK 72
+ AL+TGG SG+G +L L G + + L G I +EGDV +
Sbjct: 3 RSALVTGGASGLGRAAALALKARGYRVVV------------LDLRREGEDLIYVEGDVTR 50
Query: 73 REDAVRVVESTINHFGKLDILVNAA----AGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
ED R V L +V+AA A L FR V+E++ +GTF +
Sbjct: 51 EEDVRRAVARAQE-EAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVL 109
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
A +++ G+I+N ++ + Q +A+K V ++T A E
Sbjct: 110 RLAAWAMRENPPDAEGQR--GVIVNTASVAAFEGQIGQAAYAASKGGVVALTLPAARELA 167
Query: 189 TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK-FGEKWDIAMAALYLASDA 247
+ IRV +APG DT + L PE+ ++ + G + A L++ +
Sbjct: 168 -GWGIRVVTVAPGLF-DTPLLQGL-PEKAKASLAAQVPFPPRLGRPEEYAALVLHILENP 224
|
| >1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* Length = 319 | Back alignment and structure |
|---|
Score = 105 bits (265), Expect = 2e-27
Identities = 51/247 (20%), Positives = 100/247 (40%), Gaps = 33/247 (13%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAI---------MGRRKTVLRSAVAALHSLG 60
G+V L+TG G G+G +L + GA + + +G+ + V + G
Sbjct: 7 FDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRG 66
Query: 61 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID 120
A+ V E ++V++ ++ FG++D++VN A +S + + +
Sbjct: 67 GKAVANYDSV---EAGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVH 123
Query: 121 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSIT 180
G+F + A ++KK G+ II ++ + Q + SAAK + +
Sbjct: 124 LRGSFQVTRAAWDHMKKQNYGR--------IIMTASASGIYGNFGQANYSAAKLGLLGLA 175
Query: 181 RSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAA 240
+L +E G I N IAP + + PE++ + + +A
Sbjct: 176 NTLVIE-GRKNNIHCNTIAPNAG--SRMTETVMPEDLV----EALKPE------YVAPLV 222
Query: 241 LYLASDA 247
L+L ++
Sbjct: 223 LWLCHES 229
|
| >2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} Length = 272 | Back alignment and structure |
|---|
Score = 104 bits (261), Expect = 5e-27
Identities = 44/206 (21%), Positives = 75/206 (36%), Gaps = 18/206 (8%)
Query: 1 MESPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG 60
+TG SG G + + + G ++ + GRR+ L+ A+A S
Sbjct: 10 SSGLVPRGSHMSSTLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQ-ALAGELSAK 68
Query: 61 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAG-NFLVPAEDLSPNGFRTVIEI 119
+ L DVR R V++ F L L+N A PA+ + + T+++
Sbjct: 69 TRVLPLTLDVRDRAAMSAAVDNLPEEFATLRGLINNAGLALGTDPAQSCDLDDWDTMVDT 128
Query: 120 DSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINIS---ATLHY-TATWYQIHVSAAKAA 175
+ G L L G +G I+N+ Y + Y KA
Sbjct: 129 NIKGLLYSTRLLLPRLIAHG-------AGASIVNLGSVAGKWPYPGSHVY----GGTKAF 177
Query: 176 VDSITRSLALEWGTDYAIRVNGIAPG 201
V+ + +L + +RV + PG
Sbjct: 178 VEQFSLNLRCDLQ-GTGVRVTNLEPG 202
|
| >3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3q6i_A* 3m1l_A Length = 454 | Back alignment and structure |
|---|
Score = 106 bits (268), Expect = 5e-27
Identities = 57/247 (23%), Positives = 94/247 (38%), Gaps = 31/247 (12%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L GKVA++TG GIG I+ + GA + + A + L D
Sbjct: 211 LDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVA---DKVGGTALTLD 267
Query: 70 VRKREDAVRVVESTINHFG-KLDILVNAAAG----NFLV--PAEDLSPNGFRTVIEIDSV 122
V + ++ H G K+DILVN AG L + + VI ++ +
Sbjct: 268 VTADDAVDKITAHVTEHHGGKVDILVN-NAGITRDKLLANMDEKR-----WDAVIAVNLL 321
Query: 123 GTFIMCHEALKY--LKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSIT 180
+ + + +GGR +I +S+ Q + + KA + +
Sbjct: 322 APQRLTEGLVGNGTIGEGGR----------VIGLSSMAGIAGNRGQTNYATTKAGMIGLA 371
Query: 181 RSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAA 240
+LA D I +N +APG I +T + P R + ++ G+ D+A
Sbjct: 372 EALAPVLA-DKGITINAVAPGFI-ETKMTEAI-PLATREVGRRLNSLFQGGQPVDVAELI 428
Query: 241 LYLASDA 247
Y AS A
Sbjct: 429 AYFASPA 435
|
| >3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* Length = 248 | Back alignment and structure |
|---|
Score = 103 bits (259), Expect = 6e-27
Identities = 51/198 (25%), Positives = 81/198 (40%), Gaps = 21/198 (10%)
Query: 14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKR 73
+ L+TG +G G I+ + + G + GRR+ L+ + LG + DVR R
Sbjct: 2 IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQ-ELKD--ELGDNLYIAQLDVRNR 58
Query: 74 EDAVRVVESTINHFGKLDILVNAAAGNF-LVPAEDLSPNGFRTVIEIDSVGTFIMCHEAL 132
++ S + +DILVN A + PA S + T+I+ ++ G M L
Sbjct: 59 AAIEEMLASLPAEWCNIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVL 118
Query: 133 KYLKKGGRGQASSSSGGIIINISATL-HYT---ATWYQIHVSAAKAAVDSITRSLALEWG 188
+ + G IINI +T + Y A KA V + +L +
Sbjct: 119 PGMVERNHGH--------IINIGSTAGSWPYAGGNVY----GATKAFVRQFSLNLRTDL- 165
Query: 189 TDYAIRVNGIAPGPIKDT 206
A+RV I PG + T
Sbjct: 166 HGTAVRVTDIEPGLVGGT 183
|
| >3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} Length = 230 | Back alignment and structure |
|---|
Score = 101 bits (255), Expect = 1e-26
Identities = 38/214 (17%), Positives = 77/214 (35%), Gaps = 25/214 (11%)
Query: 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK 72
+ ++TG SG+G E++ G A + GR ++ L V L D+
Sbjct: 2 SLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLS-TVTN--CLSNNVGYRARDLAS 58
Query: 73 REDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEAL 132
++ ++ E +V++A + ++ P +T+IE + + E +
Sbjct: 59 HQEVEQLFEQL---DSIPSTVVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELV 115
Query: 133 KYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYA 192
K K ++ I +T + A K AV + S+ LE
Sbjct: 116 KRYKDQPVN---------VVMIMSTAAQQPKAQESTYCAVKWAVKGLIESVRLELK-GKP 165
Query: 193 IRVNGIAPGPI---------KDTAGVSKLAPEEI 217
+++ + PG + K S ++ E+
Sbjct: 166 MKIIAVYPGGMATEFWETSGKSLDTSSFMSAEDA 199
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604 | Back alignment and structure |
|---|
Score = 105 bits (263), Expect = 5e-26
Identities = 56/247 (22%), Positives = 102/247 (41%), Gaps = 33/247 (13%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAI---------MGRRKTVLRSAVAALHSLG 60
K KV ++TG G G+G SL+ K GA + + G V + G
Sbjct: 6 FKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNG 65
Query: 61 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID 120
A+ +V D ++VE+ + +FG + +++N A + ++ ++ VI++
Sbjct: 66 GVAVADYNNV---LDGDKIVETAVKNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVH 122
Query: 121 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSIT 180
G F + A Y +K G+ I+N S+ + Q + ++AK+A+
Sbjct: 123 LNGAFAVTKAAWPYFQKQKYGR--------IVNTSSPAGLYGNFGQANYASAKSALLGFA 174
Query: 181 RSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAA 240
+LA E G Y I+ N IA P+ + + P + + + +A
Sbjct: 175 ETLAKE-GAKYNIKANAIA--PLARSRMTESIMPPPML----EKLGPE------KVAPLV 221
Query: 241 LYLASDA 247
LYL+S
Sbjct: 222 LYLSSAE 228
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604 | Back alignment and structure |
|---|
Score = 97.1 bits (242), Expect = 3e-23
Identities = 62/249 (24%), Positives = 112/249 (44%), Gaps = 29/249 (11%)
Query: 1 MESPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAI--MGRRKTVLRSAVAALHS 58
S LK KV L+TG G+G+G E + K+GA + + V + +
Sbjct: 311 DASGAPTVSLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKDATKT----VDEIKA 366
Query: 59 LGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIE 118
G A + DV +D+ ++++ I+ +G +DILVN A +S + +V +
Sbjct: 367 AGGEAWPDQHDVA--KDSEAIIKNVIDKYGTIDILVNNAGILRDRSFAKMSKQEWDSVQQ 424
Query: 119 IDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDS 178
+ +GTF + A Y + G IINI++T + Q + S++KA +
Sbjct: 425 VHLIGTFNLSRLAWPYFVEKQ--------FGRIINITSTSGIYGNFGQANYSSSKAGILG 476
Query: 179 ITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAM 238
+++++A+E G I+VN +AP +TA + E+ + + A +A
Sbjct: 477 LSKTMAIE-GAKNNIKVNIVAPH--AETAMTLSIMREQDK----NLYHAD------QVAP 523
Query: 239 AALYLASDA 247
+YL +D
Sbjct: 524 LLVYLGTDD 532
|
| >3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} Length = 287 | Back alignment and structure |
|---|
Score = 101 bits (253), Expect = 8e-26
Identities = 43/202 (21%), Positives = 70/202 (34%), Gaps = 23/202 (11%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIA---IMGRRKTVLRSAVAALHS--LGIPAI 64
L K L+TG +GIG +L+ + + RR L +
Sbjct: 31 LAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVH 90
Query: 65 GLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF-LVPAEDLSPNGFRTVIEIDSVG 123
+ D+ + E +E+ F +DILVN A ++ + V + +
Sbjct: 91 VAQLDITQAEKIKPFIENLPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTA 150
Query: 124 TFIMCHEALKYLKKGGRGQASSSSGGIIINISATL-HYT---ATWYQIHVSAAKAAVDSI 179
+ L + G I+N+ + + Y A+K AV +
Sbjct: 151 LINITQAVLPIFQAKNSGD--------IVNLGSIAGRDAYPTGSIY----CASKFAVGAF 198
Query: 180 TRSLALEWGTDYAIRVNGIAPG 201
T SL E + IRV IAPG
Sbjct: 199 TDSLRKEL-INTKIRVILIAPG 219
|
| >3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} Length = 613 | Back alignment and structure |
|---|
Score = 103 bits (259), Expect = 1e-25
Identities = 58/226 (25%), Positives = 94/226 (41%), Gaps = 32/226 (14%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAI---------MGRRKTVLRSAVAALHSLG 60
G+VA++TG G+G+G E +L + GA + + G + V + G
Sbjct: 17 YDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAG 76
Query: 61 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID 120
A+ V D +V+E+ I FG++DILVN A S + V ++
Sbjct: 77 GEAVADYNSV---IDGAKVIETAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVH 133
Query: 121 SVGTFIMCHEALKYLKK--GGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDS 178
G+F A Y+KK GR +SS+ GI N Q++ +AAK +
Sbjct: 134 LKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIYGNFG----------QVNYTAAKMGLIG 183
Query: 179 ITRSLALEWGTDYAIRVNGIAPG-------PIKDTAGVSKLAPEEI 217
+ ++A+E G + N I P I ++L P+ I
Sbjct: 184 LANTVAIE-GARNNVLCNVIVPTAASRMTEGILPDILFNELKPKLI 228
|
| >2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} Length = 207 | Back alignment and structure |
|---|
Score = 98.0 bits (245), Expect = 2e-25
Identities = 31/190 (16%), Positives = 63/190 (33%), Gaps = 24/190 (12%)
Query: 15 ALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKRE 74
L+TG G+G + L G + + GRR L + + +PA D+
Sbjct: 3 VLITGATGGLGGAFARAL--KGHDLLLSGRRAGALAELAREVGARALPA-----DLADEL 55
Query: 75 DAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKY 134
+A ++E G LD+LV+A + + ++ + LK+
Sbjct: 56 EAKALLE----EAGPLDLLVHAVGKAGRASVREAGRDLVEEMLAAHLLTAA----FVLKH 107
Query: 135 LKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIR 194
+ + + A Y +AAK A+++ + E +
Sbjct: 108 ARFQKGAR--------AVFFGAYPRYVQVPGFAAYAAAKGALEAYLEAARKELL-REGVH 158
Query: 195 VNGIAPGPIK 204
+ + +
Sbjct: 159 LVLVRLPAVA 168
|
| >3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} Length = 324 | Back alignment and structure |
|---|
Score = 99.4 bits (248), Expect = 7e-25
Identities = 53/234 (22%), Positives = 92/234 (39%), Gaps = 34/234 (14%)
Query: 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRS-------AVAALHSLGIPA 63
K+ L+TG SG G + L G + R + A + + +
Sbjct: 4 SKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRT 63
Query: 64 IGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVG 123
+ L DV+ + R ++ I G++D+L++ A PAE +P F + +I+ +
Sbjct: 64 LEL--DVQSQVSVDRAIDQIIGEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLS 121
Query: 124 TFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT-----WYQIHVSAAKAAVDS 178
T + AL ++++ G +I IS++ T Y AAKAA+D+
Sbjct: 122 TQRVNRAALPHMRRQKHGL--------LIWISSSSSAGGTPPYLAPY----FAAKAAMDA 169
Query: 179 ITRSLALE---WGTDYAIRVNGIAPGPIK-DTAGVSKLAPEEIRSKATDYMAAY 228
I A E WG I + I PG T + + ++ +Y A
Sbjct: 170 IAVQYARELSRWG----IETSIIVPGAFTSGTNHFAHSGVPDDHARQAEYEAGP 219
|
| >3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} Length = 281 | Back alignment and structure |
|---|
Score = 94.6 bits (236), Expect = 2e-23
Identities = 54/199 (27%), Positives = 83/199 (41%), Gaps = 26/199 (13%)
Query: 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK 72
KV L+TG SG G I+ G + RR L VAA + AI L DV
Sbjct: 6 KVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAA-YPDRAEAISL--DVTD 62
Query: 73 REDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEAL 132
E V + +G++D+LVN A + E+ + R + E+ G + L
Sbjct: 63 GERIDVVAADVLARYGRVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALL 122
Query: 133 KYLKKGGRGQASSSSGGIIINISATLHYTAT----WYQIHVSAAKAAVDSITRSLALE-- 186
+ R + S G ++NIS+ + Y SA KAA++ ++ LA E
Sbjct: 123 PQM----RERGS----GSVVNISSFGGQLSFAGFSAY----SATKAALEQLSEGLADEVA 170
Query: 187 -WGTDYAIRVNGIAPGPIK 204
+G I+V + PG +
Sbjct: 171 PFG----IKVLIVEPGAFR 185
|
| >1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* Length = 276 | Back alignment and structure |
|---|
Score = 92.0 bits (229), Expect = 2e-22
Identities = 46/207 (22%), Positives = 79/207 (38%), Gaps = 14/207 (6%)
Query: 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMG-RRKTVLRSAVAALHSLGIPAIGLEGD 69
VAL+TGG GIG I L + + ++ R T ++AV L + G+ + D
Sbjct: 3 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLD 62
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
+ + + + +G LD+LVN A F V ++ + GT +C
Sbjct: 63 IDDLQSIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCT 122
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSIT--RSLALEW 187
E L +K GR ++N+S+ + A K ++IT + L
Sbjct: 123 ELLPLIKPQGR----------VVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMN 172
Query: 188 GTDYAIRVNGIAPGPIKDTA-GVSKLA 213
+ +A GV+K+
Sbjct: 173 KFVEDTKKGVHQKEGWPSSAYGVTKIG 199
|
| >3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} Length = 311 | Back alignment and structure |
|---|
Score = 89.2 bits (221), Expect = 4e-21
Identities = 48/250 (19%), Positives = 77/250 (30%), Gaps = 45/250 (18%)
Query: 1 MESPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG 60
M + K + A++TGG GIGFEI QL +G + + R T AV L +
Sbjct: 1 MPETCPNTVTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSN 60
Query: 61 IP-AIGLEGDVRKREDAVR-VVESTINHFGKLDILVNAAAGNFLVPAED----------- 107
+ + DV + + + HFGKLDILVN A D
Sbjct: 61 HENVVFHQLDVTDPIATMSSLADFIKTHFGKLDILVNNAGVAGFSVDADRFKAMISDIGE 120
Query: 108 -------------------LSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSG 148
+ ++I+ G + + L+ S
Sbjct: 121 DSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQL--------SDS 172
Query: 149 GIIINISATLHYTATWYQIHVSAAKAAVDSIT----RSLALEWGTDYAIRVNGIAPGPIK 204
I+N+S++ D++T + D+ + P
Sbjct: 173 PRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSF 232
Query: 205 DTA-GVSKLA 213
A SK
Sbjct: 233 GAAYTTSKAC 242
|
| >1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 250 | Back alignment and structure |
|---|
Score = 87.4 bits (217), Expect = 5e-21
Identities = 38/203 (18%), Positives = 74/203 (36%), Gaps = 17/203 (8%)
Query: 13 KVALLTGGGSGIGFEISLQLGKHGAAIA-IMGRRKTVLRSAVAALHSLGIPAIGLEGDVR 71
++TG GIG + QL K I R + + ++ + + L V
Sbjct: 4 GSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPL--TVT 61
Query: 72 KREDAVRVVESTINHFG--KLDILV-NAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
+ V G L +L+ NA + + +++++ ++
Sbjct: 62 CDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLT 121
Query: 129 HEALKYLKKGG---RGQASSSSGGIIINISA-----TLHYTATWYQIHVS--AAKAAVDS 178
+ L LK G S S +I IS+ T + + + ++ +KAA++
Sbjct: 122 QKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYRMSKAAINM 181
Query: 179 ITRSLALEWGTDYAIRVNGIAPG 201
R+LA++ D + V PG
Sbjct: 182 FGRTLAVDLK-DDNVLVVNFCPG 203
|
| >1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 Length = 267 | Back alignment and structure |
|---|
Score = 83.2 bits (206), Expect = 3e-19
Identities = 37/202 (18%), Positives = 67/202 (33%), Gaps = 16/202 (7%)
Query: 13 KVALLTGGGSGIGFEISLQLGKHGAAIA--IMGRRKTVLRSAVAALHSLGIPAIGLEGDV 70
L+TG G+G + L R + L LE D+
Sbjct: 22 NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDL 81
Query: 71 RKREDAVRVVE--STINHFGKLDILV-NAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIM 127
R + ++V + L++L NA + ++ ++V ++
Sbjct: 82 RNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIML 141
Query: 128 CHEALKYLKKGG---RGQASSSSGGIIINISA-----TLHYTATWYQIHVSAAKAAVDSI 179
L LKK Q IIN+S+ + Y S K+A+++
Sbjct: 142 AKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNTDGGMYAYRTS--KSALNAA 199
Query: 180 TRSLALEWGTDYAIRVNGIAPG 201
T+SL+++ I + PG
Sbjct: 200 TKSLSVDLYPQ-RIMCVSLHPG 220
|
| >1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... Length = 327 | Back alignment and structure |
|---|
Score = 79.4 bits (196), Expect = 2e-17
Identities = 50/205 (24%), Positives = 84/205 (40%), Gaps = 31/205 (15%)
Query: 13 KVALLTGGGSGIGFEISLQLGKHGAA----IAIMGRRKTV--LRSAVAALHSLGIPAIGL 66
V L+TG SGIG ++++L + A + KT L A AL L
Sbjct: 3 TVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETL 62
Query: 67 EGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFI 126
+ DVR + E G++D+LV A L P E L + +V++++ VGT
Sbjct: 63 QLDVRDSKSVAAARERVT--EGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVR 120
Query: 127 MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT----WYQIHVSAAKAAVDSITRS 182
M L +K+ G G+ ++ + Y A+K A++ + S
Sbjct: 121 MLQAFLPDMKRRGSGR--------VLVTGSVGGLMGLPFNDVY----CASKFALEGLCES 168
Query: 183 LALE---WGTDYAIRVNGIAPGPIK 204
LA+ +G + ++ I GP+
Sbjct: 169 LAVLLLPFG----VHLSLIECGPVH 189
|
| >2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ... Length = 269 | Back alignment and structure |
|---|
Score = 77.6 bits (192), Expect = 3e-17
Identities = 56/272 (20%), Positives = 95/272 (34%), Gaps = 55/272 (20%)
Query: 8 DILKGKVALLTGGGSG--IGFEISLQLGKHGAAIAI--MGRRKTVLRSAVAALHSLGIPA 63
+L GK L++G + I F I+ + GA + + R + + R L A
Sbjct: 3 GLLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRIT----DRLPAKA 58
Query: 64 IGLEGDVRKREDAVRVVESTINHFG---KLDILVNAAAGNFLVPAEDLSPN--------G 112
LE DV+ E + G KLD +V++ F +P + N
Sbjct: 59 PLLELDVQNEEHLASLAGRVTEAIGAGNKLDGVVHSIG--F-MPQTGMGINPFFDAPYAD 115
Query: 113 FRTVIEIDSVGTFI-MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT----WYQI 167
I I S ++ M L + GG I+ + + + Y
Sbjct: 116 VSKGIHI-SAYSYASMAKALLPIMNPGG---------SIV-----GMDFDPSRAMPAYNW 160
Query: 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAA 227
++ AK+A++S+ R +A E G +R N +A GPI+ A + +
Sbjct: 161 -MTVAKSALESVNRFVAREAGKY-GVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLL 218
Query: 228 YKFGE-----KW------DIAMAALYLASDAG 248
+ + W +A L SD
Sbjct: 219 EEGWDQRAPIGWNMKDATPVAKTVCALLSDWL 250
|
| >3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 2jjy_A* Length = 280 | Back alignment and structure |
|---|
Score = 75.0 bits (185), Expect = 4e-16
Identities = 56/268 (20%), Positives = 98/268 (36%), Gaps = 61/268 (22%)
Query: 9 ILKGKVALLTGGGSG--IGFEISLQLGKHGAAIAI--MGRRKTVLRSAVAALHSLGIPAI 64
L GK L+TG S I + I+ + + GA +A +G+ K + A + A
Sbjct: 23 FLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQFKDRVEKLCAEFNP----AA 78
Query: 65 GLEGDVRKREDAVRVVESTINHFGKLDILVNAAA--------GNFLVPAEDLSPNGFRTV 116
L DV ++ + + LD +V++ A GNF+ + ++ GF
Sbjct: 79 VLPCDVISDQEIKDLFVELGKVWDGLDAIVHSIAFAPRDQLEGNFI---DCVTREGFSIA 135
Query: 117 IEIDSVGTFI-MCHEALKYLKKGGRGQASSSSGGIIINISATLHY-----TATWYQIHVS 170
+I S +F + E +K ++ L Y Y +
Sbjct: 136 HDI-SAYSFAALAKEGRSMMKNRN--------ASMV-----ALTYIGAEKAMPSYNT-MG 180
Query: 171 AAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKF 230
AKA++++ R AL G D I+VN ++ GPIK A S +++ +
Sbjct: 181 VAKASLEATVRYTALALGED-GIKVNAVSAGPIKTLAA----------SGISNFKKMLDY 229
Query: 231 GEKW----------DIAMAALYLASDAG 248
++ +L SD
Sbjct: 230 NAMVSPLKKNVDIMEVGNTVAFLCSDMA 257
|
| >4alk_A ENR, enoyl-[acyl-carrier-protein] reductase [NADPH]; oxidoreductase, short-chain dehydrogenase/reductase superfam fatty acid biosynthesis; HET: NAP E9P GLU; 1.90A {Staphylococcus aureus} PDB: 4alj_A* 4ali_A* 4alm_A 4aln_A 3gr6_A* 3gns_A* 3gnt_A 4all_A* Length = 282 | Back alignment and structure |
|---|
Score = 74.6 bits (184), Expect = 5e-16
Identities = 62/265 (23%), Positives = 102/265 (38%), Gaps = 54/265 (20%)
Query: 9 ILKGKVALLTGGGSG--IGFEISLQLGKHGAAIAI--MGRRKTVLRSAVAAL-HSLGIP- 62
L+ K ++ G + I F ++ L + GA + R R + L L P
Sbjct: 29 NLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKER---SRKELEKLLEQLNQPE 85
Query: 63 AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAA--------GNFLVPAEDLSPNGFR 114
A + DV+ E+ + E G +D + ++ A G F + S GF
Sbjct: 86 AHLYQIDVQSDEEVINGFEQIGKDVGNIDGVYHSIAFANMEDLRGRFS----ETSREGFL 141
Query: 115 TVIEIDSVGTFI-MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAK 173
+I S + + HEA K + +GG A++ GG A +Y + AK
Sbjct: 142 LAQDI-SSYSLTIVAHEAKKLMPEGGSIVATTYLGGE----FAVQNYNV------MGVAK 190
Query: 174 AAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEK 233
A++++ + LAL+ G D IRVN I+ GPI+ + + K E+
Sbjct: 191 ASLEANVKYLALDLGPD-NIRVNAISAGPIRTLSA----------KGVGGFNTILKEIEE 239
Query: 234 W----------DIAMAALYLASDAG 248
++ A YL SD
Sbjct: 240 RAPLKRNVDQVEVGKTAAYLLSDLS 264
|
| >2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A* Length = 315 | Back alignment and structure |
|---|
Score = 74.8 bits (184), Expect = 5e-16
Identities = 66/291 (22%), Positives = 105/291 (36%), Gaps = 71/291 (24%)
Query: 10 LKGKVALLTGGGS--GIGFEISLQLGKHGAAIAI------------------------MG 43
L+G+ A + G G G+ I+ L GA +A+ +
Sbjct: 7 LRGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDEDRKLP 66
Query: 44 RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN--------HFGKLDILVN 95
+ + V L + + D++ + V TI G +DILV+
Sbjct: 67 DGSLIEFAGVYPLDAAFDKPEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVH 126
Query: 96 AAA------GNFLVPAEDLSPNGFRTVIEIDSVGTFI-MCHEALKYLKKGGRGQASSSSG 148
+ A L + S G+ S +F+ + + +GG
Sbjct: 127 SLANGPEVTKPLL----ETSRKGYLAASSN-SAYSFVSLLQHFGPIMNEGG--------- 172
Query: 149 GIIINISATLHYTAT-----WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPI 203
+ TL Y A Y +S+AKAA++S TR+LA E G Y +RVN I+ GP+
Sbjct: 173 SAV-----TLSYLAAERVVPGYGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPL 227
Query: 204 KDTA--GVSKLAPEEIRSKATDYMAAYKFGEK----WDIAMAALYLASDAG 248
K A + K + A DY + D+ AAL+L S
Sbjct: 228 KSRAASAIGKSGEKSFIDYAIDYSYNNAPLRRDLHSDDVGGAALFLLSPLA 278
|
| >1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A* Length = 297 | Back alignment and structure |
|---|
Score = 74.4 bits (183), Expect = 6e-16
Identities = 61/295 (20%), Positives = 97/295 (32%), Gaps = 85/295 (28%)
Query: 10 LKGKVALLTGGGS--GIGFEISLQLGKHGAAIAI------------------------MG 43
L+GK A + G G G+ ++ L GA I + +
Sbjct: 6 LRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLP 65
Query: 44 RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN--------HFGKLDILVN 95
+ V L ++ + DV+ + T+ FG +DILV+
Sbjct: 66 DGSLMEIKKVYPLDAVFDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVH 125
Query: 96 AAA------GNFLVPAEDLSPNGFRTVIEIDSVGTFI-MCHEALKYLKKGGRGQASSSSG 148
+ A L + S G+ I S +F+ + L + GG
Sbjct: 126 SLANGPEVSKPLL----ETSRKGYLAAISA-SSYSFVSLLSHFLPIMNPGG--------- 171
Query: 149 GIIINISATLHYTAT-----WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPI 203
I +L Y A+ Y +S+AKAA++S TR LA E G IRVN I+ GP+
Sbjct: 172 ASI-----SLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPL 226
Query: 204 KDTAGVSKLAPEEIRSKATDYMAAYKFGEKW----------DIAMAALYLASDAG 248
A ++ ++ AA +L S
Sbjct: 227 GSRAA----------KAIGFIDTMIEYSYNNAPIQKTLTADEVGNAAAFLVSPLA 271
|
| >2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* Length = 261 | Back alignment and structure |
|---|
Score = 73.4 bits (181), Expect = 8e-16
Identities = 62/266 (23%), Positives = 105/266 (39%), Gaps = 58/266 (21%)
Query: 9 ILKGKVALLTGGGSG--IGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGL 66
L GK AL+ G + +GF I+ +L + GA +A+ + + + A +LG A+
Sbjct: 5 DLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALG-GALLF 63
Query: 67 EGDVRKREDAVRVVESTINHFGKLDILVNAAA--------GNFLVPAEDLSPNGFRTVIE 118
DV + E+ + FG LD LV+A A G ++ D + +E
Sbjct: 64 RADVTQDEELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYI----DTRRQDWLLALE 119
Query: 119 IDSVGTFI-MCHEALKYLKKGGRGQASSSSGGIIINISATLHY-----TATWYQIHVSAA 172
+ S + + + A L++GG GI+ TL Y Y + ++ A
Sbjct: 120 V-SAYSLVAVARRAEPLLREGG---------GIV-----TLTYYASEKVVPKYNV-MAIA 163
Query: 173 KAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGE 232
KAA+++ R LA E G +RVN I+ GP++ A + Y
Sbjct: 164 KAALEASVRYLAYELGPK-GVRVNAISAGPVRTVAA----------RSIPGFTKMYDRVA 212
Query: 233 KW----------DIAMAALYLASDAG 248
+ ++ L+L S
Sbjct: 213 QTAPLRRNITQEEVGNLGLFLLSPLA 238
|
| >3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* Length = 266 | Back alignment and structure |
|---|
Score = 73.4 bits (181), Expect = 9e-16
Identities = 55/265 (20%), Positives = 98/265 (36%), Gaps = 54/265 (20%)
Query: 9 ILKGKVALLTGGGSG--IGFEISLQLGKHGAAIAI--MGRRKTVLRSAVAAL-HSLGI-P 62
L+G+ ++ G + I + I+ L + GA + G R L +V L +L
Sbjct: 4 SLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGER---LEKSVHELAGTLDRND 60
Query: 63 AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAA--------GNFLVPAEDLSPNGFR 114
+I L DV + S G + + + A G +L + + +GF
Sbjct: 61 SIILPCDVTNDAEIETCFASIKEQVGVIHGIAHCIAFANKEELVGEYL----NTNRDGFL 116
Query: 115 TVIEIDSVGTFI-MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAK 173
I S + + A + +GG + GG +Y + AK
Sbjct: 117 LAHNI-SSYSLTAVVKAARPMMTEGGSIVTLTYLGGE----LVMPNYNV------MGVAK 165
Query: 174 AAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEK 233
A++D+ + LA + G + IRVN I+ GPI+ + +D+ + K E+
Sbjct: 166 ASLDASVKYLAADLGKE-NIRVNSISAGPIRTLSA----------KGISDFNSILKDIEE 214
Query: 234 W----------DIAMAALYLASDAG 248
++ A +L SD
Sbjct: 215 RAPLRRTTTPEEVGDTAAFLFSDMS 239
|
| >3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* Length = 293 | Back alignment and structure |
|---|
Score = 73.4 bits (181), Expect = 2e-15
Identities = 65/267 (24%), Positives = 98/267 (36%), Gaps = 54/267 (20%)
Query: 6 KGDILKGKVALLTGGGSG--IGFEISLQLGKHGAAIAI--MGRRKTVLRSAVAAL-HSLG 60
+ +L+GK L+ G + I + I+ + GA +A G L+ V L LG
Sbjct: 25 QSGLLQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDA---LKKRVEPLAEELG 81
Query: 61 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAA--------GNFLVPAEDLSPNG 112
DV V E+ +GKLD LV+A G ++ D S
Sbjct: 82 AFVA-GHCDVADAASIDAVFETLEKKWGKLDFLVHAIGFSDKDELTGRYI----DTSEAN 136
Query: 113 FRTVIEIDSVGTFI-MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSA 171
F + I SV + + A K + GG + G +Y +
Sbjct: 137 FTNTMLI-SVYSLTAVSRRAEKLMADGGSILTLTYYGAE----KVMPNYNV------MGV 185
Query: 172 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFG 231
AKAA+++ + LA++ G IRVN I+ GPIK A S D+ K+
Sbjct: 186 AKAALEASVKYLAVDLGPQ-NIRVNAISAGPIKTLAA----------SGIGDFRYILKWN 234
Query: 232 EKW----------DIAMAALYLASDAG 248
E ++ LY SD
Sbjct: 235 EYNAPLRRTVTIDEVGDVGLYFLSDLS 261
|
| >3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* Length = 296 | Back alignment and structure |
|---|
Score = 73.4 bits (181), Expect = 2e-15
Identities = 62/267 (23%), Positives = 105/267 (39%), Gaps = 54/267 (20%)
Query: 6 KGDILKGKVALLTGGGSG--IGFEISLQLGKHGAAIAI--MGRRKTVLRSAVAAL-HSLG 60
G +++GK ++ G + + + I+ + GA +A+ + + V L SLG
Sbjct: 24 TGMLMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSET---FKKRVDPLAESLG 80
Query: 61 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAA--------GNFLVPAEDLSPNG 112
+ + DV E + + +G LD +V+A A G ++ D S
Sbjct: 81 VKLT-VPCDVSDAESVDNMFKVLAEEWGSLDFVVHAVAFSDKNELKGRYV----DTSLGN 135
Query: 113 FRTVIEIDSVGTFI-MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSA 171
F T + I S +F + +A + GG S G HY +
Sbjct: 136 FLTSMHI-SCYSFTYIASKAEPLMTNGGSILTLSYYGAE----KVVPHYNV------MGV 184
Query: 172 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFG 231
KAA+++ + LA++ G IRVN I+ GP++ A S +D+ +
Sbjct: 185 CKAALEASVKYLAVDLGKQ-QIRVNAISAGPVRTLAS----------SGISDFHYILTWN 233
Query: 232 EKW----------DIAMAALYLASDAG 248
+ D+ AALYL SD G
Sbjct: 234 KYNSPLRRNTTLDDVGGAALYLLSDLG 260
|
| >2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A* Length = 275 | Back alignment and structure |
|---|
Score = 73.0 bits (180), Expect = 2e-15
Identities = 67/269 (24%), Positives = 102/269 (37%), Gaps = 64/269 (23%)
Query: 9 ILKGKVALLTGGGSG--IGFEISLQLGKHGAAIAI--MGRRKTVLRSAVAAL-HSLGIPA 63
LKGK L+ G + I + I+ GA +A + L V + L P
Sbjct: 3 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES---LEKRVRPIAQELNSPY 59
Query: 64 IGLEGDVRKREDAVRVVESTINHFGKLDILVNAAA--------GNFLVPAEDLSPNGFRT 115
+ E DV K E + S G LD +V++ A G+ L + S + F T
Sbjct: 60 V-YELDVSKEEHFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLL----ETSKSAFNT 114
Query: 116 VIEIDSVGTFI-MCHEALKYLKKGGRGQASSSSGGIIINISATLHY-----TATWYQIHV 169
+EI SV + I + + L G ++ TL Y Y + +
Sbjct: 115 AMEI-SVYSLIELTNTLKPLLNNGA---------SVL-----TLSYLGSTKYMAHYNV-M 158
Query: 170 SAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK 229
AKAA++S R LA++ G IRVN ++ GPI+ A S D+ K
Sbjct: 159 GLAKAALESAVRYLAVDLGKH-HIRVNALSAGPIRTLAS----------SGIADFRMILK 207
Query: 230 FGEKW----------DIAMAALYLASDAG 248
+ E ++ A +YL S
Sbjct: 208 WNEINAPLRKNVSLEEVGNAGMYLLSSLS 236
|
| >1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* Length = 265 | Back alignment and structure |
|---|
Score = 72.6 bits (179), Expect = 2e-15
Identities = 57/264 (21%), Positives = 96/264 (36%), Gaps = 53/264 (20%)
Query: 9 ILKGKVALLTGGGSG--IGFEISLQLGKHGAAIAI--MGRRKTVLRSAVAAL-HSLGIPA 63
L GK L+TG S I + I+ + + GA +A + L+ V LG
Sbjct: 6 FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDK---LKGRVEEFAAQLGSDI 62
Query: 64 IGLEGDVRKREDAVRVVESTINHFGKLDILVNAAA--------GNFLVPAEDLSPNGFRT 115
+ L+ DV + + + K D V++ G+++ ++ GF+
Sbjct: 63 V-LQCDVAEDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYV---NAVTREGFKI 118
Query: 116 VIEIDSVGTFI-MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKA 174
+I S +F+ M L G S G A +Y + AKA
Sbjct: 119 AHDI-SSYSFVAMAKACRSMLNPGSALLTLSYLGAE----RAIPNYNV------MGLAKA 167
Query: 175 AVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKW 234
++++ R +A G + +RVN I+ GPI+ A S D+ E
Sbjct: 168 SLEANVRYMANAMGPE-GVRVNAISAGPIRTLAA----------SGIKDFRKMLAHCEAV 216
Query: 235 ----------DIAMAALYLASDAG 248
D+ +A +L SD
Sbjct: 217 TPIRRTVTIEDVGNSAAFLCSDLS 240
|
| >3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} Length = 271 | Back alignment and structure |
|---|
Score = 72.2 bits (178), Expect = 3e-15
Identities = 64/271 (23%), Positives = 93/271 (34%), Gaps = 53/271 (19%)
Query: 2 ESPFKGDILKGKVALLTGGGSG--IGFEISLQLGKHGAAIAI--MGRRKTVLRSAVAAL- 56
L GK LLTG S I + I+ + GA +A +G R + +
Sbjct: 4 HHHHHMGFLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDR---FKDRITEFA 60
Query: 57 HSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAA--------GNFLVPAEDL 108
G + DV + S H+ LD LV++ G+FL + L
Sbjct: 61 AEFGSELV-FPCDVADDAQIDALFASLKTHWDSLDGLVHSIGFAPREAIAGDFL---DGL 116
Query: 109 SPNGFRTVIEIDSVGTFI-MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 167
+ FR +I S +F + AL L S G A +Y
Sbjct: 117 TRENFRIAHDI-SAYSFPALAKAALPMLSDDASLLTLSYLGAE----RAIPNYNT----- 166
Query: 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAA 227
+ AKAA+++ R LA+ G +RVN I+ GPIK A S +
Sbjct: 167 -MGLAKAALEASVRYLAVSLGAK-GVRVNAISAGPIKTLAA----------SGIKSFGKI 214
Query: 228 YKFGEKW----------DIAMAALYLASDAG 248
F E + A +L SD
Sbjct: 215 LDFVESNSPLKRNVTIEQVGNAGAFLLSDLA 245
|
| >2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella} Length = 319 | Back alignment and structure |
|---|
Score = 72.9 bits (179), Expect = 3e-15
Identities = 69/310 (22%), Positives = 110/310 (35%), Gaps = 85/310 (27%)
Query: 4 PFKGDILKGKVALLTGGGS--GIGFEISLQLGKHGAAIAI-------------------- 41
P D L+GK A + G G G+ I L GA + +
Sbjct: 2 PLPVD-LRGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFE 60
Query: 42 -----------------MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTI 84
+ ++ + L ++ + +V + V TI
Sbjct: 61 QDSFYAQEPSSKVAAEAAEKPVDLVFDKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTI 120
Query: 85 N--------HFGKLDILVNAAA------GNFLVPAEDLSPNGFRTVIEIDSVGTFI-MCH 129
+ G++DILV++ A L S G+ + S +F+ +
Sbjct: 121 SEVAEAVRADVGQIDILVHSLANGPEVTKPLL----QTSRKGYLAAVSS-SSYSFVSLLQ 175
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTAT-----WYQIHVSAAKAAVDSITRSLA 184
L +K+GG + L Y A+ Y +S+AKAA++S R+LA
Sbjct: 176 HFLPLMKEGG---------SAL-----ALSYIASEKVIPGYGGGMSSAKAALESDCRTLA 221
Query: 185 LEWGTDYAIRVNGIAPGPIKDTA--GVSKLAPEEIRSKATDYMAAYKFGEK----WDIAM 238
E G A+RVN I+ GP+K A + K + A DY A +K D+
Sbjct: 222 FEAGRARAVRVNCISAGPLKSRAASAIGKAGDKTFIDLAIDYSEANAPLQKELESDDVGR 281
Query: 239 AALYLASDAG 248
AAL+L S
Sbjct: 282 AALFLLSPLA 291
|
| >2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} Length = 285 | Back alignment and structure |
|---|
Score = 71.9 bits (177), Expect = 5e-15
Identities = 64/269 (23%), Positives = 106/269 (39%), Gaps = 63/269 (23%)
Query: 9 ILKGKVALLTGGGSG--IGFEISLQLGKHGAAIAI--MGRRKTVLRSAVAAL-HSLGIPA 63
+L+GK AL+TG + I + I+ + GA +A + L V + G
Sbjct: 18 LLEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPK---LEKRVREIAKGFGSDL 74
Query: 64 IGLEGDVRKREDAVRVVESTINHFGKLDILVNAAA--------GNFLVPAEDLSPNGFRT 115
+ ++ DV ED + + ++G LDI+V++ A G + D S GF+
Sbjct: 75 V-VKCDVSLDEDIKNLKKFLEENWGSLDIIVHSIAYAPKEEFKGGVI----DTSREGFKI 129
Query: 116 VIEIDSVGTFI-MCHEALKYLKKGGRGQASSSSGGIIINISATLHY-----TATWYQIHV 169
++I SV + I + E L ++ G I+ TL Y Y + +
Sbjct: 130 AMDI-SVYSLIALTRELLPLMEGRN--------GAIV-----TLSYYGAEKVVPHYNV-M 174
Query: 170 SAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK 229
AKAA++S R LA + R+N I+ GP+K A T + +
Sbjct: 175 GIAKAALESTVRYLAYDIAKH-GHRINAISAGPVKTLAA----------YSITGFHLLME 223
Query: 230 FGEKW----------DIAMAALYLASDAG 248
K D+ A++L SD
Sbjct: 224 HTTKVNPFGKPITIEDVGDTAVFLCSDWA 252
|
| >3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ... Length = 329 | Back alignment and structure |
|---|
Score = 64.5 bits (157), Expect = 2e-12
Identities = 49/243 (20%), Positives = 82/243 (33%), Gaps = 65/243 (26%)
Query: 12 GKVALLTGGGS--GIGFEISLQLGKHGAAIAI------MGRRKTVLR------------- 50
+ + G G G G+ I+ +L K I +
Sbjct: 2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKD 61
Query: 51 -------------SAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAA 97
S A ++ + V +GK+++LV++
Sbjct: 62 KKMNILDMLPFDASFDTANDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSL 121
Query: 98 A------GNFLVPAEDLSPNGFRTVIEIDSVGTFI-MCHEALKYLKKGGRGQASSSSGGI 150
A + L + S G+ + S + I +C + +K I
Sbjct: 122 ANAKEVQKDLL----NTSRKGYLDALSK-SSYSLISLCKYFVNIMKPQS---------SI 167
Query: 151 IINISATLHYTAT-----WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKD 205
I +L Y A+ Y +S+AKAA++S TR LA G +Y IR+N I+ GP+K
Sbjct: 168 I-----SLTYHASQKVVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKS 222
Query: 206 TAG 208
A
Sbjct: 223 RAA 225
|
| >1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* Length = 287 | Back alignment and structure |
|---|
Score = 56.4 bits (136), Expect = 1e-09
Identities = 17/103 (16%), Positives = 34/103 (33%), Gaps = 9/103 (8%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
+KGK A++ G +G + L GA + + GR+ ++A +++ +
Sbjct: 117 VKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRF-KVNVTAAE 175
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAA-AGNFLVPAEDLSPN 111
V+ + A G L+P
Sbjct: 176 TADDASRAEAVKGA-------HFVFTAGAIGLELLPQAAWQNE 211
|
| >3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} Length = 291 | Back alignment and structure |
|---|
Score = 48.0 bits (115), Expect = 7e-07
Identities = 26/110 (23%), Positives = 43/110 (39%), Gaps = 21/110 (19%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
+ ++TG SG+G + +L + GA + + R +A + G
Sbjct: 14 FAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAART----------MAGQ 63
Query: 70 VRKRE------DAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGF 113
V RE +VR + D+L+N AG VP L+ +GF
Sbjct: 64 VEVRELDLQDLSSVR---RFADGVSGADVLIN-NAGIMAVP-YALTVDGF 108
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 249 | |||
| 4g81_D | 255 | Putative hexonate dehydrogenase; enzyme function i | 100.0 | |
| 4fn4_A | 254 | Short chain dehydrogenase; NADH-binding, rossmann | 100.0 | |
| 4hp8_A | 247 | 2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi | 100.0 | |
| 4fgs_A | 273 | Probable dehydrogenase protein; PSI-biology, nysgr | 100.0 | |
| 4b79_A | 242 | PA4098, probable short-chain dehydrogenase; oxidor | 100.0 | |
| 4gkb_A | 258 | 3-oxoacyl-[acyl-carrier protein] reductase; putati | 100.0 | |
| 4fs3_A | 256 | Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; | 100.0 | |
| 3ged_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 100.0 | |
| 4h15_A | 261 | Short chain alcohol dehydrogenase-related dehydro; | 100.0 | |
| 3gaf_A | 256 | 7-alpha-hydroxysteroid dehydrogenase; seattle stru | 100.0 | |
| 3pk0_A | 262 | Short-chain dehydrogenase/reductase SDR; ssgcid, s | 100.0 | |
| 3lf2_A | 265 | Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross | 100.0 | |
| 3oid_A | 258 | Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa | 100.0 | |
| 4egf_A | 266 | L-xylulose reductase; structural genomics, ssgcid, | 100.0 | |
| 4ibo_A | 271 | Gluconate dehydrogenase; enzyme function initiativ | 100.0 | |
| 3v8b_A | 283 | Putative dehydrogenase, possibly 3-oxoacyl-[acyl- | 100.0 | |
| 3imf_A | 257 | Short chain dehydrogenase; structural genomics, in | 100.0 | |
| 3op4_A | 248 | 3-oxoacyl-[acyl-carrier protein] reductase; 3-keto | 100.0 | |
| 3ucx_A | 264 | Short chain dehydrogenase; ssgcid, seattle structu | 100.0 | |
| 3tox_A | 280 | Short chain dehydrogenase; structural genomics, PS | 100.0 | |
| 3rih_A | 293 | Short chain dehydrogenase or reductase; structural | 100.0 | |
| 3sju_A | 279 | Keto reductase; short-chain dehydrogenase, oxidore | 100.0 | |
| 3is3_A | 270 | 17BETA-hydroxysteroid dehydrogenase; short chain d | 100.0 | |
| 3ftp_A | 270 | 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid | 100.0 | |
| 3svt_A | 281 | Short-chain type dehydrogenase/reductase; ssgcid, | 100.0 | |
| 4dqx_A | 277 | Probable oxidoreductase protein; structural genomi | 100.0 | |
| 3grp_A | 266 | 3-oxoacyl-(acyl carrierprotein) reductase; structu | 100.0 | |
| 3osu_A | 246 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 100.0 | |
| 3r1i_A | 276 | Short-chain type dehydrogenase/reductase; structur | 100.0 | |
| 4fc7_A | 277 | Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman | 100.0 | |
| 3gvc_A | 277 | Oxidoreductase, probable short-chain type dehydrog | 100.0 | |
| 3s55_A | 281 | Putative short-chain dehydrogenase/reductase; stru | 100.0 | |
| 3uf0_A | 273 | Short-chain dehydrogenase/reductase SDR; gluconate | 100.0 | |
| 3uve_A | 286 | Carveol dehydrogenase ((+)-trans-carveol dehydrog; | 100.0 | |
| 3u5t_A | 267 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 100.0 | |
| 4dmm_A | 269 | 3-oxoacyl-[acyl-carrier-protein] reductase; rossma | 100.0 | |
| 3rwb_A | 247 | TPLDH, pyridoxal 4-dehydrogenase; short chain dehy | 100.0 | |
| 3tzq_B | 271 | Short-chain type dehydrogenase/reductase; ssgcid, | 100.0 | |
| 4eso_A | 255 | Putative oxidoreductase; NADP, structural genomics | 100.0 | |
| 4e6p_A | 259 | Probable sorbitol dehydrogenase (L-iditol 2-dehyd; | 100.0 | |
| 3h7a_A | 252 | Short chain dehydrogenase; oxidoreductase, PSI-2, | 100.0 | |
| 3tsc_A | 277 | Putative oxidoreductase; structural genomics, seat | 100.0 | |
| 1ae1_A | 273 | Tropinone reductase-I; oxidoreductase, tropane alk | 100.0 | |
| 3pgx_A | 280 | Carveol dehydrogenase; structural genomics, seattl | 100.0 | |
| 3t7c_A | 299 | Carveol dehydrogenase; structural genomics, seattl | 100.0 | |
| 4imr_A | 275 | 3-oxoacyl-(acyl-carrier-protein) reductase; oxidor | 100.0 | |
| 4da9_A | 280 | Short-chain dehydrogenase/reductase; structural ge | 100.0 | |
| 3v2h_A | 281 | D-beta-hydroxybutyrate dehydrogenase; structural g | 100.0 | |
| 3lyl_A | 247 | 3-oxoacyl-(acyl-carrier-protein) reductase; alpha | 100.0 | |
| 1zem_A | 262 | Xylitol dehydrogenase; rossmann fold, dinucleotide | 100.0 | |
| 3v2g_A | 271 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 100.0 | |
| 3r3s_A | 294 | Oxidoreductase; structural genomics, csgid, center | 100.0 | |
| 3cxt_A | 291 | Dehydrogenase with different specificities; rossma | 100.0 | |
| 3k31_A | 296 | Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI | 100.0 | |
| 1vl8_A | 267 | Gluconate 5-dehydrogenase; TM0441, structural geno | 100.0 | |
| 2ae2_A | 260 | Protein (tropinone reductase-II); oxidoreductase, | 100.0 | |
| 3edm_A | 259 | Short chain dehydrogenase; structural genomics, ox | 100.0 | |
| 3f1l_A | 252 | Uncharacterized oxidoreductase YCIK; E. coli, NADP | 100.0 | |
| 1iy8_A | 267 | Levodione reductase; oxidoreductase; HET: NAD; 1.6 | 100.0 | |
| 2jah_A | 247 | Clavulanic acid dehydrogenase; short-chain dehydro | 100.0 | |
| 2uvd_A | 246 | 3-oxoacyl-(acyl-carrier-protein) reductase; beta-k | 100.0 | |
| 3oec_A | 317 | Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; | 100.0 | |
| 3ai3_A | 263 | NADPH-sorbose reductase; rossmann-fold, NADPH-depe | 100.0 | |
| 3ezl_A | 256 | Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA | 100.0 | |
| 1x1t_A | 260 | D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S | 100.0 | |
| 3p19_A | 266 | BFPVVD8, putative blue fluorescent protein; rossma | 100.0 | |
| 3grk_A | 293 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 100.0 | |
| 1e7w_A | 291 | Pteridine reductase; dihydrofolate reductase, shor | 100.0 | |
| 3sx2_A | 278 | Putative 3-ketoacyl-(acyl-carrier-protein) reduct; | 100.0 | |
| 3nyw_A | 250 | Putative oxidoreductase; fatty acid synthesis,3-ox | 100.0 | |
| 2zat_A | 260 | Dehydrogenase/reductase SDR family member 4; alpha | 100.0 | |
| 3n74_A | 261 | 3-ketoacyl-(acyl-carrier-protein) reductase; seatt | 100.0 | |
| 4iin_A | 271 | 3-ketoacyl-acyl carrier protein reductase (FABG); | 100.0 | |
| 3o38_A | 266 | Short chain dehydrogenase; tuberculosis, ortholog | 100.0 | |
| 3sc4_A | 285 | Short chain dehydrogenase (A0QTM2 homolog); ssgcid | 100.0 | |
| 4dry_A | 281 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 100.0 | |
| 3ksu_A | 262 | 3-oxoacyl-acyl carrier protein reductase; structur | 100.0 | |
| 3a28_C | 258 | L-2.3-butanediol dehydrogenase; chiral substrate r | 100.0 | |
| 3tfo_A | 264 | Putative 3-oxoacyl-(acyl-carrier-protein) reducta; | 100.0 | |
| 3tpc_A | 257 | Short chain alcohol dehydrogenase-related dehydro; | 100.0 | |
| 3e03_A | 274 | Short chain dehydrogenase; structural genomics, PS | 100.0 | |
| 3gk3_A | 269 | Acetoacetyl-COA reductase; acetoacetyl-CO reductas | 100.0 | |
| 2ew8_A | 249 | (S)-1-phenylethanol dehydrogenase; transferase; 2. | 100.0 | |
| 3t4x_A | 267 | Oxidoreductase, short chain dehydrogenase/reducta; | 100.0 | |
| 1geg_A | 256 | Acetoin reductase; SDR family, oxidoreductase; HET | 100.0 | |
| 2b4q_A | 276 | Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier | 100.0 | |
| 4dyv_A | 272 | Short-chain dehydrogenase/reductase SDR; structura | 100.0 | |
| 3l6e_A | 235 | Oxidoreductase, short-chain dehydrogenase/reducta; | 100.0 | |
| 1uls_A | 245 | Putative 3-oxoacyl-acyl carrier protein reductase; | 100.0 | |
| 3ijr_A | 291 | Oxidoreductase, short chain dehydrogenase/reducta; | 100.0 | |
| 3vtz_A | 269 | Glucose 1-dehydrogenase; rossmann fold, oxidoreduc | 100.0 | |
| 2z1n_A | 260 | Dehydrogenase; reductase, SDR, oxidoreductase; 1.8 | 100.0 | |
| 2rhc_B | 277 | Actinorhodin polyketide ketoreductase; oxidoreduct | 100.0 | |
| 3qiv_A | 253 | Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR | 100.0 | |
| 3rku_A | 287 | Oxidoreductase YMR226C; substrate fingerprint, sho | 100.0 | |
| 3oig_A | 266 | Enoyl-[acyl-carrier-protein] reductase [NADH]; fat | 100.0 | |
| 3zv4_A | 281 | CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox | 100.0 | |
| 3pxx_A | 287 | Carveol dehydrogenase; structural genomics, seattl | 100.0 | |
| 3rkr_A | 262 | Short chain oxidoreductase; rossmann fold; HET: NA | 100.0 | |
| 2qhx_A | 328 | Pteridine reductase 1; oxidoreductase, short-chain | 100.0 | |
| 1xhl_A | 297 | Short-chain dehydrogenase/reductase family member | 100.0 | |
| 3ek2_A | 271 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 100.0 | |
| 2x9g_A | 288 | PTR1, pteridine reductase; short chain dehydrogena | 100.0 | |
| 3nrc_A | 280 | Enoyl-[acyl-carrier-protein] reductase (NADH); ros | 100.0 | |
| 2d1y_A | 256 | Hypothetical protein TT0321; strucrtural genomics, | 100.0 | |
| 1xkq_A | 280 | Short-chain reductase family member (5D234); parra | 100.0 | |
| 1mxh_A | 276 | Pteridine reductase 2; SDR topology, protein-subst | 100.0 | |
| 2q2v_A | 255 | Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore | 100.0 | |
| 4iiu_A | 267 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 100.0 | |
| 3i1j_A | 247 | Oxidoreductase, short chain dehydrogenase/reducta; | 100.0 | |
| 3gem_A | 260 | Short chain dehydrogenase; structural genomics, AP | 100.0 | |
| 3uxy_A | 266 | Short-chain dehydrogenase/reductase SDR; structura | 100.0 | |
| 3kzv_A | 254 | Uncharacterized oxidoreductase YIR035C; cytoplasmi | 100.0 | |
| 3gdg_A | 267 | Probable NADP-dependent mannitol dehydrogenase; ro | 100.0 | |
| 3icc_A | 255 | Putative 3-oxoacyl-(acyl carrier protein) reducta; | 100.0 | |
| 1hdc_A | 254 | 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi | 100.0 | |
| 1hxh_A | 253 | 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b | 100.0 | |
| 1g0o_A | 283 | Trihydroxynaphthalene reductase; protein-NADPH-act | 100.0 | |
| 2wyu_A | 261 | Enoyl-[acyl carrier protein] reductase; oxidoreduc | 100.0 | |
| 2a4k_A | 263 | 3-oxoacyl-[acyl carrier protein] reductase; reduct | 100.0 | |
| 3ak4_A | 263 | NADH-dependent quinuclidinone reductase; SDR, (R)- | 100.0 | |
| 1spx_A | 278 | Short-chain reductase family member (5L265); paral | 100.0 | |
| 2pd4_A | 275 | Enoyl-[acyl-carrier-protein] reductase [NADH]; ant | 100.0 | |
| 2nm0_A | 253 | Probable 3-oxacyl-(acyl-carrier-protein) reductas; | 100.0 | |
| 3tl3_A | 257 | Short-chain type dehydrogenase/reductase; ssgcid, | 100.0 | |
| 2p91_A | 285 | Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD | 100.0 | |
| 3kvo_A | 346 | Hydroxysteroid dehydrogenase-like protein 2; HSDL2 | 100.0 | |
| 2fwm_X | 250 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e | 100.0 | |
| 3dii_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 100.0 | |
| 3awd_A | 260 | GOX2181, putative polyol dehydrogenase; oxidoreduc | 100.0 | |
| 3i4f_A | 264 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 100.0 | |
| 1nff_A | 260 | Putative oxidoreductase RV2002; directed evolution | 100.0 | |
| 4e3z_A | 272 | Putative oxidoreductase protein; PSI-biology, stru | 100.0 | |
| 1qsg_A | 265 | Enoyl-[acyl-carrier-protein] reductase; enoyl redu | 100.0 | |
| 1yde_A | 270 | Retinal dehydrogenase/reductase 3; oxidoreductase, | 100.0 | |
| 3qlj_A | 322 | Short chain dehydrogenase; structural genomics, se | 100.0 | |
| 2dtx_A | 264 | Glucose 1-dehydrogenase related protein; rossmann | 100.0 | |
| 1xq1_A | 266 | Putative tropinone reducatse; structural genomics, | 100.0 | |
| 1uzm_A | 247 | 3-oxoacyl-[acyl-carrier protein] reductase; beta-k | 100.0 | |
| 3tjr_A | 301 | Short chain dehydrogenase; structural genomics, se | 100.0 | |
| 1gee_A | 261 | Glucose 1-dehydrogenase; short-chain dehydrogenase | 100.0 | |
| 2qq5_A | 260 | DHRS1, dehydrogenase/reductase SDR family member 1 | 100.0 | |
| 2ekp_A | 239 | 2-deoxy-D-gluconate 3-dehydrogenase; structural ge | 100.0 | |
| 3l77_A | 235 | Short-chain alcohol dehydrogenase; oxidoreductase; | 100.0 | |
| 1oaa_A | 259 | Sepiapterin reductase; tetrahydrobiopterin, oxidor | 100.0 | |
| 2cfc_A | 250 | 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor | 100.0 | |
| 3un1_A | 260 | Probable oxidoreductase; structural genomics, PSI- | 100.0 | |
| 3f9i_A | 249 | 3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto | 100.0 | |
| 2h7i_A | 269 | Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi | 100.0 | |
| 2c07_A | 285 | 3-oxoacyl-(acyl-carrier protein) reductase; oxidor | 100.0 | |
| 2nwq_A | 272 | Probable short-chain dehydrogenase; oxidoreductase | 100.0 | |
| 3ppi_A | 281 | 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de | 100.0 | |
| 2ag5_A | 246 | DHRS6, dehydrogenase/reductase (SDR family) member | 100.0 | |
| 3asu_A | 248 | Short-chain dehydrogenase/reductase SDR; SDR famil | 100.0 | |
| 2hq1_A | 247 | Glucose/ribitol dehydrogenase; CTH-1438, structura | 100.0 | |
| 2wsb_A | 254 | Galactitol dehydrogenase; oxidoreductase, SDR, ros | 100.0 | |
| 1fmc_A | 255 | 7 alpha-hydroxysteroid dehydrogenase; short-chain | 100.0 | |
| 3ctm_A | 279 | Carbonyl reductase; alcohol dehydrogenase, short-c | 100.0 | |
| 1h5q_A | 265 | NADP-dependent mannitol dehydrogenase; oxidoreduct | 100.0 | |
| 1w6u_A | 302 | 2,4-dienoyl-COA reductase, mitochondrial precursor | 100.0 | |
| 3m1a_A | 281 | Putative dehydrogenase; short, PSI, MCSG, structur | 100.0 | |
| 2pnf_A | 248 | 3-oxoacyl-[acyl-carrier-protein] reductase; short | 100.0 | |
| 2pd6_A | 264 | Estradiol 17-beta-dehydrogenase 8; short-chain deh | 100.0 | |
| 2o23_A | 265 | HADH2 protein; HSD17B10, schad, ERAB, type II HADH | 100.0 | |
| 4e4y_A | 244 | Short chain dehydrogenase family protein; structur | 100.0 | |
| 1edo_A | 244 | Beta-keto acyl carrier protein reductase; nucleoti | 100.0 | |
| 1zk4_A | 251 | R-specific alcohol dehydrogenase; short chain redu | 100.0 | |
| 1yxm_A | 303 | Pecra, peroxisomal trans 2-enoyl COA reductase; pe | 100.0 | |
| 1zmo_A | 244 | Halohydrin dehalogenase; haloalcohol dehalogenase, | 100.0 | |
| 3ioy_A | 319 | Short-chain dehydrogenase/reductase SDR; structura | 100.0 | |
| 1zmt_A | 254 | Haloalcohol dehalogenase HHEC; halohydrin dehaloge | 100.0 | |
| 3u9l_A | 324 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 100.0 | |
| 2bgk_A | 278 | Rhizome secoisolariciresinol dehydrogenase; oxidor | 100.0 | |
| 2bd0_A | 244 | Sepiapterin reductase; oxidoreductase; HET: NAP BI | 100.0 | |
| 3lt0_A | 329 | Enoyl-ACP reductase; triclosan, triclosan variant, | 100.0 | |
| 3s8m_A | 422 | Enoyl-ACP reductase; rossmann fold, oxidoreductase | 100.0 | |
| 3afn_B | 258 | Carbonyl reductase; alpha/beta/alpha, rossmann-fol | 100.0 | |
| 2ph3_A | 245 | 3-oxoacyl-[acyl carrier protein] reductase; TTHA04 | 100.0 | |
| 3d3w_A | 244 | L-xylulose reductase; uronate cycle, short-chain d | 100.0 | |
| 3zu3_A | 405 | Putative reductase YPO4104/Y4119/YP_4011; oxidored | 100.0 | |
| 1ja9_A | 274 | 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p | 100.0 | |
| 3guy_A | 230 | Short-chain dehydrogenase/reductase SDR; structura | 100.0 | |
| 1yb1_A | 272 | 17-beta-hydroxysteroid dehydrogenase type XI; shor | 100.0 | |
| 3u0b_A | 454 | Oxidoreductase, short chain dehydrogenase/reducta | 100.0 | |
| 1xg5_A | 279 | ARPG836; short chain dehydrogenase, human, SGC, st | 100.0 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 100.0 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 100.0 | |
| 1cyd_A | 244 | Carbonyl reductase; short-chain dehydrogenase, oxi | 100.0 | |
| 3uce_A | 223 | Dehydrogenase; rossmann fold, oxidoreductase; HET: | 100.0 | |
| 1o5i_A | 249 | 3-oxoacyl-(acyl carrier protein) reductase; TM1169 | 100.0 | |
| 2gdz_A | 267 | NAD+-dependent 15-hydroxyprostaglandin dehydrogen; | 100.0 | |
| 2o2s_A | 315 | Enoyl-acyl carrier reductase; enoyl reductase, tri | 100.0 | |
| 2ehd_A | 234 | Oxidoreductase, oxidoreductase, short-chain dehydr | 100.0 | |
| 1d7o_A | 297 | Enoyl-[acyl-carrier protein] reductase (NADH) PRE; | 100.0 | |
| 2ptg_A | 319 | Enoyl-acyl carrier reductase; apicomplexa, enoyl ( | 100.0 | |
| 1gz6_A | 319 | Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF | 100.0 | |
| 3e9n_A | 245 | Putative short-chain dehydrogenase/reductase; stru | 100.0 | |
| 3o26_A | 311 | Salutaridine reductase; short chain dehydrogenase/ | 100.0 | |
| 1jtv_A | 327 | 17 beta-hydroxysteroid dehydrogenase type 1; stero | 100.0 | |
| 3oml_A | 613 | GH14720P, peroxisomal multifunctional enzyme type | 100.0 | |
| 3orf_A | 251 | Dihydropteridine reductase; alpha-beta-alpha sandw | 100.0 | |
| 3rd5_A | 291 | Mypaa.01249.C; ssgcid, structural genomics, seattl | 100.0 | |
| 1dhr_A | 241 | Dihydropteridine reductase; oxidoreductase(acting | 100.0 | |
| 1yo6_A | 250 | Putative carbonyl reductase sniffer; tyrosine-depe | 100.0 | |
| 1xu9_A | 286 | Corticosteroid 11-beta-dehydrogenase, isozyme 1; h | 100.0 | |
| 1sby_A | 254 | Alcohol dehydrogenase; ternary complex, NAD, trifl | 100.0 | |
| 1ooe_A | 236 | Dihydropteridine reductase; structural genomics, P | 100.0 | |
| 4eue_A | 418 | Putative reductase CA_C0462; TER, biofuel, synthet | 100.0 | |
| 1uay_A | 242 | Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid | 100.0 | |
| 1sny_A | 267 | Sniffer CG10964-PA; alpha and beta protein, rossma | 100.0 | |
| 1wma_A | 276 | Carbonyl reductase [NADPH] 1; oxidoreductase; HET: | 100.0 | |
| 1fjh_A | 257 | 3alpha-hydroxysteroid dehydrogenase/carbonyl reduc | 100.0 | |
| 2yut_A | 207 | Putative short-chain oxidoreductase; alpha and bet | 100.0 | |
| 2uv8_A | 1887 | Fatty acid synthase subunit alpha (FAS2); fatty ac | 100.0 | |
| 2pff_A | 1688 | Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl | 100.0 | |
| 3qp9_A | 525 | Type I polyketide synthase pikaii; rossmann fold, | 100.0 | |
| 2uv9_A | 1878 | Fatty acid synthase alpha subunits; fungal, dehydr | 100.0 | |
| 3d7l_A | 202 | LIN1944 protein; APC89317, structural genomics, PS | 100.0 | |
| 2dkn_A | 255 | 3-alpha-hydroxysteroid dehydrogenase; oxidoreducta | 100.0 | |
| 3zen_D | 3089 | Fatty acid synthase; transferase, mycolic acid bio | 100.0 | |
| 3mje_A | 496 | AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1. | 100.0 | |
| 3slk_A | 795 | Polyketide synthase extender module 2; rossmann fo | 99.98 | |
| 2fr1_A | 486 | Erythromycin synthase, eryai; short chain dehydrog | 99.97 | |
| 2z5l_A | 511 | Tylkr1, tylactone synthase starter module and modu | 99.97 | |
| 3rft_A | 267 | Uronate dehydrogenase; apoenzyme, rossmann fold, N | 99.96 | |
| 3e8x_A | 236 | Putative NAD-dependent epimerase/dehydratase; stru | 99.95 | |
| 2bka_A | 242 | CC3, TAT-interacting protein TIP30; NADPH, PEG600, | 99.95 | |
| 2gn4_A | 344 | FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann | 99.94 | |
| 1y1p_A | 342 | ARII, aldehyde reductase II; rossmann fold, short | 99.94 | |
| 3r6d_A | 221 | NAD-dependent epimerase/dehydratase; structural ge | 99.94 | |
| 1orr_A | 347 | CDP-tyvelose-2-epimerase; rossmann fold, short-cha | 99.94 | |
| 2pk3_A | 321 | GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor | 99.93 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 99.93 | |
| 1rkx_A | 357 | CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; | 99.93 | |
| 3enk_A | 341 | UDP-glucose 4-epimerase; seattle structural genomi | 99.93 | |
| 2pzm_A | 330 | Putative nucleotide sugar epimerase/ dehydratase; | 99.93 | |
| 1i24_A | 404 | Sulfolipid biosynthesis protein SQD1; SDR, short-c | 99.92 | |
| 2c29_D | 337 | Dihydroflavonol 4-reductase; flavonoids, short deh | 99.92 | |
| 2hun_A | 336 | 336AA long hypothetical DTDP-glucose 4,6-dehydrat; | 99.92 | |
| 1kew_A | 361 | RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo | 99.92 | |
| 3dqp_A | 219 | Oxidoreductase YLBE; alpha-beta protein., structur | 99.92 | |
| 4ggo_A | 401 | Trans-2-enoyl-COA reductase; rossmann fold, oxidor | 99.92 | |
| 1xq6_A | 253 | Unknown protein; structural genomics, protein stru | 99.92 | |
| 1sb8_A | 352 | WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN | 99.92 | |
| 2z1m_A | 345 | GDP-D-mannose dehydratase; short-chain dehydrogena | 99.92 | |
| 3sxp_A | 362 | ADP-L-glycero-D-mannoheptose-6-epimerase; rossman | 99.92 | |
| 2x4g_A | 342 | Nucleoside-diphosphate-sugar epimerase; isomerase; | 99.91 | |
| 4id9_A | 347 | Short-chain dehydrogenase/reductase; putative dehy | 99.91 | |
| 3qvo_A | 236 | NMRA family protein; structural genomics, PSI-biol | 99.91 | |
| 3ruf_A | 351 | WBGU; rossmann fold, UDP-hexose 4-epimerase, isome | 99.91 | |
| 4egb_A | 346 | DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce | 99.91 | |
| 1n7h_A | 381 | GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, | 99.9 | |
| 3nzo_A | 399 | UDP-N-acetylglucosamine 4,6-dehydratase; structura | 99.9 | |
| 2q1s_A | 377 | Putative nucleotide sugar epimerase/ dehydratase; | 99.9 | |
| 3ay3_A | 267 | NAD-dependent epimerase/dehydratase; glucuronic ac | 99.9 | |
| 4f6c_A | 427 | AUSA reductase domain protein; thioester reductase | 99.9 | |
| 3ko8_A | 312 | NAD-dependent epimerase/dehydratase; isomerase, UD | 99.9 | |
| 2c5a_A | 379 | GDP-mannose-3', 5'-epimerase; short chain dehydrat | 99.9 | |
| 1gy8_A | 397 | UDP-galactose 4-epimerase; oxidoreductase; HET: NA | 99.9 | |
| 1oc2_A | 348 | DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos | 99.9 | |
| 1t2a_A | 375 | GDP-mannose 4,6 dehydratase; structural genomics c | 99.9 | |
| 1db3_A | 372 | GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya | 99.9 | |
| 2p4h_X | 322 | Vestitone reductase; NADPH-dependent reductase, is | 99.9 | |
| 3ehe_A | 313 | UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, | 99.9 | |
| 2q1w_A | 333 | Putative nucleotide sugar epimerase/ dehydratase; | 99.9 | |
| 2hrz_A | 342 | AGR_C_4963P, nucleoside-diphosphate-sugar epimeras | 99.9 | |
| 3dhn_A | 227 | NAD-dependent epimerase/dehydratase; reductase, PF | 99.9 | |
| 2rh8_A | 338 | Anthocyanidin reductase; flavonoids, rossmann fold | 99.89 | |
| 1hdo_A | 206 | Biliverdin IX beta reductase; foetal metabolism, H | 99.89 | |
| 1ek6_A | 348 | UDP-galactose 4-epimerase; short-chain dehydrogena | 99.89 | |
| 2p5y_A | 311 | UDP-glucose 4-epimerase; TTHA0591, structural geno | 99.89 | |
| 1r6d_A | 337 | TDP-glucose-4,6-dehydratase; rossmann fold, short- | 99.89 | |
| 1rpn_A | 335 | GDP-mannose 4,6-dehydratase; short-chain dehydroge | 99.89 | |
| 3h2s_A | 224 | Putative NADH-flavin reductase; Q03B84, NESG, LCR1 | 99.88 | |
| 2x6t_A | 357 | ADP-L-glycero-D-manno-heptose-6-epimerase; isomera | 99.88 | |
| 2ydy_A | 315 | Methionine adenosyltransferase 2 subunit beta; oxi | 99.87 | |
| 2c20_A | 330 | UDP-glucose 4-epimerase; carbohydrate metabolism, | 99.87 | |
| 1udb_A | 338 | Epimerase, UDP-galactose-4-epimerase; isomerase; H | 99.87 | |
| 3ew7_A | 221 | LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend | 99.87 | |
| 3m2p_A | 311 | UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J | 99.87 | |
| 1vl0_A | 292 | DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s | 99.87 | |
| 3slg_A | 372 | PBGP3 protein; structural genomics, seattle struct | 99.87 | |
| 2b69_A | 343 | UDP-glucuronate decarboxylase 1; UDP-glucoronic ac | 99.86 | |
| 2yy7_A | 312 | L-threonine dehydrogenase; thermolabIle, flavobact | 99.86 | |
| 2bll_A | 345 | Protein YFBG; decarboxylase, short chain dehydroge | 99.86 | |
| 2a35_A | 215 | Hypothetical protein PA4017; alpha-beta-alpha sand | 99.86 | |
| 4dqv_A | 478 | Probable peptide synthetase NRP (peptide synthase; | 99.85 | |
| 2ggs_A | 273 | 273AA long hypothetical DTDP-4-dehydrorhamnose red | 99.85 | |
| 1z45_A | 699 | GAL10 bifunctional protein; epimerase, mutarotase, | 99.84 | |
| 1e6u_A | 321 | GDP-fucose synthetase; epimerase/reductase, SDR, R | 99.84 | |
| 1z7e_A | 660 | Protein aRNA; rossmann fold, OB-like fold, hydrola | 99.84 | |
| 3ajr_A | 317 | NDP-sugar epimerase; L-threonine dehydrogenase, L- | 99.83 | |
| 1eq2_A | 310 | ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin | 99.83 | |
| 3sc6_A | 287 | DTDP-4-dehydrorhamnose reductase; RFBD, structural | 99.83 | |
| 1n2s_A | 299 | DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold | 99.82 | |
| 4f6l_B | 508 | AUSA reductase domain protein; thioester reductase | 99.82 | |
| 3vps_A | 321 | TUNA, NAD-dependent epimerase/dehydratase; tunicam | 99.81 | |
| 4b8w_A | 319 | GDP-L-fucose synthase; oxidoreductase; HET: NAP GD | 99.81 | |
| 2jl1_A | 287 | Triphenylmethane reductase; oxidoreductase, biorem | 99.8 | |
| 3gpi_A | 286 | NAD-dependent epimerase/dehydratase; structural ge | 99.79 | |
| 2zcu_A | 286 | Uncharacterized oxidoreductase YTFG; alpha-beta sa | 99.76 | |
| 2wm3_A | 299 | NMRA-like family domain containing protein 1; unkn | 99.74 | |
| 3i6i_A | 346 | Putative leucoanthocyanidin reductase 1; rossmann | 99.74 | |
| 2gas_A | 307 | Isoflavone reductase; NADPH-dependent reductase, o | 99.73 | |
| 1xgk_A | 352 | Nitrogen metabolite repression regulator NMRA; ros | 99.73 | |
| 3e48_A | 289 | Putative nucleoside-diphosphate-sugar epimerase; a | 99.73 | |
| 3st7_A | 369 | Capsular polysaccharide synthesis enzyme CAP5F; ro | 99.71 | |
| 2v6g_A | 364 | Progesterone 5-beta-reductase; tyrosine-dependent | 99.69 | |
| 3oh8_A | 516 | Nucleoside-diphosphate sugar epimerase (SULA FAMI; | 99.69 | |
| 3ius_A | 286 | Uncharacterized conserved protein; APC63810, silic | 99.69 | |
| 1qyd_A | 313 | Pinoresinol-lariciresinol reductase; NADPH-depende | 99.67 | |
| 2r6j_A | 318 | Eugenol synthase 1; phenylpropene, PIP reductase, | 99.67 | |
| 3c1o_A | 321 | Eugenol synthase; phenylpropene, PIP reductase, sh | 99.67 | |
| 1qyc_A | 308 | Phenylcoumaran benzylic ether reductase PT1; NADPH | 99.66 | |
| 1lu9_A | 287 | Methylene tetrahydromethanopterin dehydrogenase; a | 99.49 | |
| 4b4o_A | 298 | Epimerase family protein SDR39U1; isomerase; HET: | 99.45 | |
| 1y7t_A | 327 | Malate dehydrogenase; NAD-dependent-MDH-NADPH comp | 99.29 | |
| 1u7z_A | 226 | Coenzyme A biosynthesis bifunctional protein coabc | 99.2 | |
| 2gk4_A | 232 | Conserved hypothetical protein; alpha-beta-alpha s | 99.05 | |
| 3ic5_A | 118 | Putative saccharopine dehydrogenase; structural ge | 99.05 | |
| 3gxh_A | 157 | Putative phosphatase (DUF442); YP_001181608.1, str | 98.98 | |
| 4ina_A | 405 | Saccharopine dehydrogenase; structural genomics, P | 98.93 | |
| 2o7s_A | 523 | DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat | 98.75 | |
| 1ff9_A | 450 | Saccharopine reductase; lysine biosynthesis, alpha | 98.75 | |
| 1nvt_A | 287 | Shikimate 5'-dehydrogenase; structural genomics, P | 98.75 | |
| 1pqw_A | 198 | Polyketide synthase; rossmann fold, dimer, structu | 98.73 | |
| 1v3u_A | 333 | Leukotriene B4 12- hydroxydehydrogenase/prostaglan | 98.7 | |
| 2eez_A | 369 | Alanine dehydrogenase; TTHA0216, structural genomi | 98.7 | |
| 3ond_A | 488 | Adenosylhomocysteinase; plant protein, enzyme-subs | 98.66 | |
| 2axq_A | 467 | Saccharopine dehydrogenase; rossmann fold variant, | 98.62 | |
| 3tnl_A | 315 | Shikimate dehydrogenase; structural genomics, cent | 98.62 | |
| 1nyt_A | 271 | Shikimate 5-dehydrogenase; alpha/beta domains, WID | 98.59 | |
| 2hcy_A | 347 | Alcohol dehydrogenase 1; tetramer of asymmetric di | 98.53 | |
| 1b8p_A | 329 | Protein (malate dehydrogenase); oxidoreductase; 1. | 98.5 | |
| 3llv_A | 141 | Exopolyphosphatase-related protein; NAD(P)-binding | 98.48 | |
| 2j3h_A | 345 | NADP-dependent oxidoreductase P1; double bond redu | 98.46 | |
| 2hmt_A | 144 | YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane | 98.45 | |
| 1wly_A | 333 | CAAR, 2-haloacrylate reductase; NADPH-dependent ox | 98.43 | |
| 1qor_A | 327 | Quinone oxidoreductase; HET: NAP; 2.20A {Escherich | 98.43 | |
| 3jyo_A | 283 | Quinate/shikimate dehydrogenase; enzyme-cofactor c | 98.39 | |
| 2j8z_A | 354 | Quinone oxidoreductase; medium-chain dehydrogenase | 98.37 | |
| 2zb4_A | 357 | Prostaglandin reductase 2; rossmann fold, alternat | 98.37 | |
| 4b7c_A | 336 | Probable oxidoreductase; NADP cofactor, rossmann f | 98.36 | |
| 1p77_A | 272 | Shikimate 5-dehydrogenase; NADPH, oxidoreductase; | 98.32 | |
| 1yb5_A | 351 | Quinone oxidoreductase; medium-chain dehydrogenase | 98.31 | |
| 3t4e_A | 312 | Quinate/shikimate dehydrogenase; structural genomi | 98.27 | |
| 1smk_A | 326 | Malate dehydrogenase, glyoxysomal; tricarboxylic c | 98.26 | |
| 1jvb_A | 347 | NAD(H)-dependent alcohol dehydrogenase; archaeon, | 98.24 | |
| 1id1_A | 153 | Putative potassium channel protein; RCK domain, E. | 98.23 | |
| 4dup_A | 353 | Quinone oxidoreductase; PSI-biology, structural ge | 98.21 | |
| 2cdc_A | 366 | Glucose dehydrogenase glucose 1-dehydrogenase, DHG | 98.2 | |
| 1lss_A | 140 | TRK system potassium uptake protein TRKA homolog; | 98.18 | |
| 1hye_A | 313 | L-lactate/malate dehydrogenase; nucleotide binding | 98.15 | |
| 2eih_A | 343 | Alcohol dehydrogenase; zinc ION binding protein, s | 98.1 | |
| 4a0s_A | 447 | Octenoyl-COA reductase/carboxylase; oxidoreductase | 98.1 | |
| 2egg_A | 297 | AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff | 98.09 | |
| 3o8q_A | 281 | Shikimate 5-dehydrogenase I alpha; structural geno | 98.07 | |
| 1pjc_A | 361 | Protein (L-alanine dehydrogenase); oxidoreductase, | 98.05 | |
| 3jyn_A | 325 | Quinone oxidoreductase; rossmann fold, protein-NAD | 98.05 | |
| 3gms_A | 340 | Putative NADPH:quinone reductase; structural genom | 98.05 | |
| 3qwb_A | 334 | Probable quinone oxidoreductase; rossmann fold, qu | 98.05 | |
| 3abi_A | 365 | Putative uncharacterized protein PH1688; L-lysine | 98.01 | |
| 4eye_A | 342 | Probable oxidoreductase; structural genomics, niai | 97.98 | |
| 3pwz_A | 272 | Shikimate dehydrogenase 3; alpha-beta, oxidoreduct | 97.97 | |
| 3krt_A | 456 | Crotonyl COA reductase; structural genomics, prote | 97.94 | |
| 1yqd_A | 366 | Sinapyl alcohol dehydrogenase; lignin, monolignol, | 97.94 | |
| 2vhw_A | 377 | Alanine dehydrogenase; NAD, secreted, oxidoreducta | 97.94 | |
| 3pi7_A | 349 | NADH oxidoreductase; groes-like fold, NAD(P)-bindi | 97.93 | |
| 2c0c_A | 362 | Zinc binding alcohol dehydrogenase, domain contain | 97.92 | |
| 2g1u_A | 155 | Hypothetical protein TM1088A; structural genomics, | 97.9 | |
| 1rjw_A | 339 | ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD | 97.89 | |
| 3fwz_A | 140 | Inner membrane protein YBAL; TRKA-N domain, E.coli | 97.89 | |
| 1o6z_A | 303 | MDH, malate dehydrogenase; halophilic, ION-binding | 97.87 | |
| 1jw9_B | 249 | Molybdopterin biosynthesis MOEB protein; MOEB: mod | 97.87 | |
| 3fbg_A | 346 | Putative arginate lyase; structural genomics, unkn | 97.83 | |
| 3oj0_A | 144 | Glutr, glutamyl-tRNA reductase; structural genomic | 97.82 | |
| 2z2v_A | 365 | Hypothetical protein PH1688; L-lysine dehydrogenas | 97.82 | |
| 1iz0_A | 302 | Quinone oxidoreductase; APO-enzyme, riken structur | 97.81 | |
| 3c85_A | 183 | Putative glutathione-regulated potassium-efflux S | 97.8 | |
| 1p9o_A | 313 | Phosphopantothenoylcysteine synthetase; ligase; 2. | 97.76 | |
| 3l4b_C | 218 | TRKA K+ channel protien TM1088B; potassium channel | 97.76 | |
| 1gpj_A | 404 | Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro | 97.67 | |
| 2d8a_A | 348 | PH0655, probable L-threonine 3-dehydrogenase; pyro | 97.66 | |
| 3fi9_A | 343 | Malate dehydrogenase; structural genomics, oxidore | 97.66 | |
| 3gaz_A | 343 | Alcohol dehydrogenase superfamily protein; oxidore | 97.65 | |
| 3h8v_A | 292 | Ubiquitin-like modifier-activating enzyme 5; rossm | 97.65 | |
| 3phh_A | 269 | Shikimate dehydrogenase; shikimate pathway, helico | 97.63 | |
| 2dq4_A | 343 | L-threonine 3-dehydrogenase; NAD-dependent, oxidor | 97.61 | |
| 2vn8_A | 375 | Reticulon-4-interacting protein 1; mitochondrion, | 97.56 | |
| 1mld_A | 314 | Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D | 97.55 | |
| 3m6i_A | 363 | L-arabinitol 4-dehydrogenase; medium chain dehydro | 97.54 | |
| 5mdh_A | 333 | Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH | 97.54 | |
| 1zud_1 | 251 | Adenylyltransferase THIF; thiamin, thiazole, prote | 97.51 | |
| 3don_A | 277 | Shikimate dehydrogenase; alpha-beta structure, ros | 97.5 | |
| 3vku_A | 326 | L-LDH, L-lactate dehydrogenase; rossmann fold, NAD | 97.5 | |
| 1jay_A | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma | 97.49 | |
| 1gu7_A | 364 | Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s | 97.47 | |
| 3pqe_A | 326 | L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas | 97.46 | |
| 1x13_A | 401 | NAD(P) transhydrogenase subunit alpha; NAD(H)-bind | 97.42 | |
| 1xa0_A | 328 | Putative NADPH dependent oxidoreductases; structur | 97.41 | |
| 3uog_A | 363 | Alcohol dehydrogenase; structural genomics, protei | 97.4 | |
| 3s2e_A | 340 | Zinc-containing alcohol dehydrogenase superfamily; | 97.4 | |
| 4aj2_A | 331 | L-lactate dehydrogenase A chain; oxidoreductase-in | 97.35 | |
| 2aef_A | 234 | Calcium-gated potassium channel MTHK; rossmann fol | 97.33 | |
| 1cdo_A | 374 | Alcohol dehydrogenase; oxidoreductase, oxidoreduct | 97.32 | |
| 3tl2_A | 315 | Malate dehydrogenase; center for structural genomi | 97.31 | |
| 1e3j_A | 352 | NADP(H)-dependent ketose reductase; oxidoreductase | 97.31 | |
| 4dvj_A | 363 | Putative zinc-dependent alcohol dehydrogenase Pro; | 97.3 | |
| 1uuf_A | 369 | YAHK, zinc-type alcohol dehydrogenase-like protein | 97.29 | |
| 3p2y_A | 381 | Alanine dehydrogenase/pyridine nucleotide transhy; | 97.28 | |
| 1h2b_A | 359 | Alcohol dehydrogenase; oxidoreductase, archaea, hy | 97.26 | |
| 1piw_A | 360 | Hypothetical zinc-type alcohol dehydrogenase- like | 97.26 | |
| 3iup_A | 379 | Putative NADPH:quinone oxidoreductase; YP_296108.1 | 97.25 | |
| 2jhf_A | 374 | Alcohol dehydrogenase E chain; oxidoreductase, met | 97.24 | |
| 3rui_A | 340 | Ubiquitin-like modifier-activating enzyme ATG7; au | 97.22 | |
| 1e3i_A | 376 | Alcohol dehydrogenase, class II; HET: NAD; 2.08A { | 97.21 | |
| 1pl8_A | 356 | Human sorbitol dehydrogenase; NAD, oxidoreductase; | 97.19 | |
| 2cf5_A | 357 | Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign | 97.19 | |
| 4h7p_A | 345 | Malate dehydrogenase; ssgcid, structural G seattle | 97.19 | |
| 1vj0_A | 380 | Alcohol dehydrogenase, zinc-containing; TM0436, st | 97.18 | |
| 4e12_A | 283 | Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1 | 97.17 | |
| 3fbt_A | 282 | Chorismate mutase and shikimate 5-dehydrogenase fu | 97.17 | |
| 3two_A | 348 | Mannitol dehydrogenase; cinnamyl-alcohol dehydroge | 97.15 | |
| 3tum_A | 269 | Shikimate dehydrogenase family protein; rossmann-f | 97.13 | |
| 2fzw_A | 373 | Alcohol dehydrogenase class III CHI chain; S-nitro | 97.13 | |
| 2h6e_A | 344 | ADH-4, D-arabinose 1-dehydrogenase; rossman fold, | 97.12 | |
| 3u62_A | 253 | Shikimate dehydrogenase; shikimate pathway, oxidor | 97.11 | |
| 3gqv_A | 371 | Enoyl reductase; medium-chain reductase (MDR super | 97.11 | |
| 1l7d_A | 384 | Nicotinamide nucleotide transhydrogenase, subunit | 97.11 | |
| 1p0f_A | 373 | NADP-dependent alcohol dehydrogenase; ADH topology | 97.1 | |
| 3gvi_A | 324 | Malate dehydrogenase; NAD, oxidoreductase, tricarb | 97.1 | |
| 3uko_A | 378 | Alcohol dehydrogenase class-3; alcohol dehydrogena | 97.09 | |
| 4dio_A | 405 | NAD(P) transhydrogenase subunit alpha PART 1; stru | 97.07 | |
| 4ej6_A | 370 | Putative zinc-binding dehydrogenase; structural ge | 97.04 | |
| 1oju_A | 294 | MDH, malate dehydrogenase; hyperthermophilic, oxid | 97.03 | |
| 3ldh_A | 330 | Lactate dehydrogenase; oxidoreductase, CHOH donor, | 97.01 | |
| 3qha_A | 296 | Putative oxidoreductase; seattle structural genomi | 97.01 | |
| 2b5w_A | 357 | Glucose dehydrogenase; nucleotide binding motif, o | 96.99 | |
| 3tqh_A | 321 | Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella | 96.98 | |
| 3p7m_A | 321 | Malate dehydrogenase; putative dehydrogenase, enzy | 96.97 | |
| 1zsy_A | 357 | Mitochondrial 2-enoyl thioester reductase; medium- | 96.97 | |
| 4gsl_A | 615 | Ubiquitin-like modifier-activating enzyme ATG7; ub | 96.96 | |
| 1leh_A | 364 | Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi | 96.94 | |
| 3ip1_A | 404 | Alcohol dehydrogenase, zinc-containing; structural | 96.94 | |
| 3lk7_A | 451 | UDP-N-acetylmuramoylalanine--D-glutamate ligase; a | 96.88 | |
| 3h5n_A | 353 | MCCB protein; ubiquitin-activating enzyme, microci | 96.82 | |
| 4g65_A | 461 | TRK system potassium uptake protein TRKA; structur | 96.81 | |
| 2x0j_A | 294 | Malate dehydrogenase; oxidoreductase, hyperthermop | 96.8 | |
| 3l9w_A | 413 | Glutathione-regulated potassium-efflux system Pro | 96.79 | |
| 3hhp_A | 312 | Malate dehydrogenase; MDH, citric acid cycle, TCA | 96.78 | |
| 1pzg_A | 331 | LDH, lactate dehydrogenase; apicomplexa, APAD, tet | 96.78 | |
| 1edz_A | 320 | 5,10-methylenetetrahydrofolate dehydrogenase; nucl | 96.78 | |
| 3c24_A | 286 | Putative oxidoreductase; YP_511008.1, structural g | 96.76 | |
| 1ez4_A | 318 | Lactate dehydrogenase; rossmann fold, oxidoreducta | 96.75 | |
| 2dph_A | 398 | Formaldehyde dismutase; dismutation of aldehydes, | 96.68 | |
| 3tri_A | 280 | Pyrroline-5-carboxylate reductase; amino acid bios | 96.68 | |
| 3vh1_A | 598 | Ubiquitin-like modifier-activating enzyme ATG7; au | 96.67 | |
| 2zqz_A | 326 | L-LDH, L-lactate dehydrogenase; oxidoreductase, ro | 96.67 | |
| 3d1l_A | 266 | Putative NADP oxidoreductase BF3122; structural ge | 96.67 | |
| 3d0o_A | 317 | L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly | 96.66 | |
| 3p2o_A | 285 | Bifunctional protein fold; structural genomics, ce | 96.66 | |
| 1kol_A | 398 | Formaldehyde dehydrogenase; oxidoreductase; HET: N | 96.65 | |
| 3pef_A | 287 | 6-phosphogluconate dehydrogenase, NAD-binding; gam | 96.65 | |
| 1f8f_A | 371 | Benzyl alcohol dehydrogenase; rossmann fold, oxido | 96.64 | |
| 3aoe_E | 419 | Glutamate dehydrogenase; rossmann fold, NADH, oxid | 96.6 | |
| 3nep_X | 314 | Malate dehydrogenase; halophIle, molecular adpatat | 96.6 | |
| 2v6b_A | 304 | L-LDH, L-lactate dehydrogenase; oxidoreductase, ra | 96.59 | |
| 1y6j_A | 318 | L-lactate dehydrogenase; southeast collaboratory f | 96.58 | |
| 3fpc_A | 352 | NADP-dependent alcohol dehydrogenase; oxydoreducta | 96.54 | |
| 4dll_A | 320 | 2-hydroxy-3-oxopropionate reductase; structural ge | 96.53 | |
| 3ngx_A | 276 | Bifunctional protein fold; methylenetetrahydrofola | 96.52 | |
| 1p9l_A | 245 | Dihydrodipicolinate reductase; oxidoreductase, lys | 96.51 | |
| 1lnq_A | 336 | MTHK channels, potassium channel related protein; | 96.51 | |
| 2raf_A | 209 | Putative dinucleotide-binding oxidoreductase; NP_7 | 96.49 | |
| 1c1d_A | 355 | L-phenylalanine dehydrogenase; amino acid dehydrog | 96.49 | |
| 2xxj_A | 310 | L-LDH, L-lactate dehydrogenase; oxidoreductase, hy | 96.49 | |
| 4huj_A | 220 | Uncharacterized protein; PSI-biology, nysgrc, stru | 96.48 | |
| 3jv7_A | 345 | ADH-A; dehydrogenase, nucleotide binding, rossmann | 96.48 | |
| 2rir_A | 300 | Dipicolinate synthase, A chain; structural genomic | 96.48 | |
| 2hk9_A | 275 | Shikimate dehydrogenase; shikimate pathway, drug d | 96.47 | |
| 3goh_A | 315 | Alcohol dehydrogenase, zinc-containing; NP_718042. | 96.45 | |
| 1tt7_A | 330 | YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st | 96.42 | |
| 4a5o_A | 286 | Bifunctional protein fold; oxidoreductase, hydrola | 96.42 | |
| 1ur5_A | 309 | Malate dehydrogenase; oxidoreductase, tricarboxyli | 96.41 | |
| 1f0y_A | 302 | HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive | 96.4 | |
| 4e21_A | 358 | 6-phosphogluconate dehydrogenase (decarboxylating; | 96.39 | |
| 2d5c_A | 263 | AROE, shikimate 5-dehydrogenase; substrate, dimer, | 96.38 | |
| 3d4o_A | 293 | Dipicolinate synthase subunit A; NP_243269.1, stru | 96.36 | |
| 1a5z_A | 319 | L-lactate dehydrogenase; oxidoreductase, glycolysi | 96.34 | |
| 3nx4_A | 324 | Putative oxidoreductase; csgid, structural genomic | 96.32 | |
| 1ldn_A | 316 | L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA | 96.32 | |
| 2ewd_A | 317 | Lactate dehydrogenase,; protein-substrate_cofactor | 96.31 | |
| 4a26_A | 300 | Putative C-1-tetrahydrofolate synthase, cytoplasm; | 96.3 | |
| 1t2d_A | 322 | LDH-P, L-lactate dehydrogenase; ternary complex, o | 96.27 | |
| 3l07_A | 285 | Bifunctional protein fold; structural genomics, ID | 96.27 | |
| 4e4t_A | 419 | Phosphoribosylaminoimidazole carboxylase, ATPase; | 96.26 | |
| 2d4a_B | 308 | Malate dehydrogenase; archaea, hyperthermophIle, o | 96.26 | |
| 1b0a_A | 288 | Protein (fold bifunctional protein); folate, dehyd | 96.25 | |
| 1dih_A | 273 | Dihydrodipicolinate reductase; oxidoreductase; HET | 96.23 | |
| 3q2o_A | 389 | Phosphoribosylaminoimidazole carboxylase, ATPase; | 96.23 |
| >4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-59 Score=380.33 Aligned_cols=234 Identities=26% Similarity=0.365 Sum_probs=221.2
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
++|+||++|||||++|||+++|+.|+++|++|++++|+++.+++..+++.+.+.++.+++||++|+++++++++++.++|
T Consensus 5 f~L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 84 (255)
T 4g81_D 5 FDLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEG 84 (255)
T ss_dssp TCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTT
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHC
Confidence 58999999999999999999999999999999999999999999999999888899999999999999999999999999
Q ss_pred CCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch
Q 025672 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 167 (249)
Q Consensus 88 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~ 167 (249)
|+||++|||||+....++.+.++++|++.+++|+.|+++++|+++|.|.+++. +|+||++||..+..+.++..
T Consensus 85 G~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~-------~G~IVnisS~~~~~~~~~~~ 157 (255)
T 4g81_D 85 IHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNS-------GGKIINIGSLTSQAARPTVA 157 (255)
T ss_dssp CCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC-------CEEEEEECCGGGTSBCTTCH
T ss_pred CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccC-------CCEEEEEeehhhcCCCCCch
Confidence 99999999999998899999999999999999999999999999999976532 49999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhccCC
Q 025672 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247 (249)
Q Consensus 168 ~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~ 247 (249)
.|++||+|+.+|+|+||.||+ ++|||||+|+||+|+|++......+++..+.+.+.+|++|+++|||||++++||+||+
T Consensus 158 ~Y~asKaal~~ltr~lA~ela-~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~Pl~R~g~pediA~~v~fL~S~~ 236 (255)
T 4g81_D 158 PYTAAKGGIKMLTCSMAAEWA-QFNIQTNAIGPGYILTDMNTALIEDKQFDSWVKSSTPSQRWGRPEELIGTAIFLSSKA 236 (255)
T ss_dssp HHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCCGGGHHHHTCHHHHHHHHHHSTTCSCBCGGGGHHHHHHHHSGG
T ss_pred hHHHHHHHHHHHHHHHHHHhc-ccCeEEEEEeeCCCCCchhhcccCCHHHHHHHHhCCCCCCCcCHHHHHHHHHHHhCch
Confidence 999999999999999999999 9999999999999999876665566777788889999999999999999999999998
Q ss_pred CC
Q 025672 248 GQ 249 (249)
Q Consensus 248 a~ 249 (249)
++
T Consensus 237 a~ 238 (255)
T 4g81_D 237 SD 238 (255)
T ss_dssp GT
T ss_pred hC
Confidence 74
|
| >4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-58 Score=372.69 Aligned_cols=233 Identities=26% Similarity=0.435 Sum_probs=213.9
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
++|+||++|||||++|||+++|+.|+++|++|++++|++++++++.+++...+.++.++++|++|+++++++++++.++|
T Consensus 3 ~sL~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~ 82 (254)
T 4fn4_A 3 QSLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETY 82 (254)
T ss_dssp GGGTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 47899999999999999999999999999999999999999999999999889999999999999999999999999999
Q ss_pred CCccEEEEcCCCCC-CCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccc
Q 025672 88 GKLDILVNAAAGNF-LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ 166 (249)
Q Consensus 88 ~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~ 166 (249)
|+||++|||||+.. ..++.+.+.++|++.+++|+.++++++|+++|.|.+++. |+||++||..+..+.++.
T Consensus 83 G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~--------G~IVnisS~~g~~~~~~~ 154 (254)
T 4fn4_A 83 SRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGK--------GVIVNTASIAGIRGGFAG 154 (254)
T ss_dssp SCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--------EEEEEECCGGGTCSSSSC
T ss_pred CCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCC--------cEEEEEechhhcCCCCCC
Confidence 99999999999865 478899999999999999999999999999999988764 999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCCh-HH-HHHhhhhhhcccCCCCHHHHHHHHHHhc
Q 025672 167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP-EE-IRSKATDYMAAYKFGEKWDIAMAALYLA 244 (249)
Q Consensus 167 ~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~dva~~v~~l~ 244 (249)
..|++||+|+.+|+|+||.||+ ++|||||+|+||+|+|++......+ +. .........|++|+++|||||++++||+
T Consensus 155 ~~Y~asKaal~~ltr~lA~ela-~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~R~g~pediA~~v~fLa 233 (254)
T 4fn4_A 155 APYTVAKHGLIGLTRSIAAHYG-DQGIRAVAVLPGTVKTNIGLGSSKPSELGMRTLTKLMSLSSRLAEPEDIANVIVFLA 233 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCSSCTTSCSSCCHHHHHHHHHHHTTCCCCBCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHhh-hhCeEEEEEEeCCCCCcccccccCCcHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHh
Confidence 9999999999999999999999 9999999999999999876554433 22 2333444567899999999999999999
Q ss_pred cCCCC
Q 025672 245 SDAGQ 249 (249)
Q Consensus 245 s~~a~ 249 (249)
||+++
T Consensus 234 Sd~a~ 238 (254)
T 4fn4_A 234 SDEAS 238 (254)
T ss_dssp SGGGT
T ss_pred Cchhc
Confidence 99874
|
| >4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-57 Score=363.68 Aligned_cols=228 Identities=28% Similarity=0.335 Sum_probs=208.8
Q ss_pred CCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHH
Q 025672 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (249)
Q Consensus 7 ~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 86 (249)
+++|+||++|||||++|||+++|+.|+++|++|++++|+.. ++..+++.+.+.++.+++||++|+++++++++
T Consensus 4 ~f~L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~--~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~----- 76 (247)
T 4hp8_A 4 PFSLEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAP--DETLDIIAKDGGNASALLIDFADPLAAKDSFT----- 76 (247)
T ss_dssp TTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCC--HHHHHHHHHTTCCEEEEECCTTSTTTTTTSST-----
T ss_pred CcCCCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcH--HHHHHHHHHhCCcEEEEEccCCCHHHHHHHHH-----
Confidence 36899999999999999999999999999999999999865 56677787888899999999999999888764
Q ss_pred hCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccc
Q 025672 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ 166 (249)
Q Consensus 87 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~ 166 (249)
++++|++|||||+....++.+.+.++|++.+++|+.|+|+++|+++|.|.+++. +|+||++||..+..+.++.
T Consensus 77 ~g~iDiLVNNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~-------~G~IVnisS~~~~~g~~~~ 149 (247)
T 4hp8_A 77 DAGFDILVNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGR-------SGKVVNIASLLSFQGGIRV 149 (247)
T ss_dssp TTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC-------CEEEEEECCGGGTSCCSSC
T ss_pred hCCCCEEEECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCC-------CcEEEEEechhhCCCCCCC
Confidence 589999999999998899999999999999999999999999999999987642 4999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhccC
Q 025672 167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246 (249)
Q Consensus 167 ~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~ 246 (249)
..|++||+|+.+|+|++|.||+ ++|||||+|+||+|+|++......++...+.+.+.+|++|+++|||||.+++||+||
T Consensus 150 ~~Y~asKaav~~ltr~lA~Ela-~~gIrVNaV~PG~i~T~~~~~~~~~~~~~~~~~~~~PlgR~g~peeiA~~v~fLaSd 228 (247)
T 4hp8_A 150 PSYTAAKHGVAGLTKLLANEWA-AKGINVNAIAPGYIETNNTEALRADAARNKAILERIPAGRWGHSEDIAGAAVFLSSA 228 (247)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCSGGGHHHHTSHHHHHHHHTTCTTSSCBCTHHHHHHHHHHTSG
T ss_pred hHHHHHHHHHHHHHHHHHHHHh-hcCeEEEEEeeCCCCCcchhhcccCHHHHHHHHhCCCCCCCcCHHHHHHHHHHHhCc
Confidence 9999999999999999999999 999999999999999987655555566677788899999999999999999999999
Q ss_pred CCC
Q 025672 247 AGQ 249 (249)
Q Consensus 247 ~a~ 249 (249)
+++
T Consensus 229 ~a~ 231 (247)
T 4hp8_A 229 AAD 231 (247)
T ss_dssp GGT
T ss_pred hhc
Confidence 875
|
| >4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-56 Score=364.77 Aligned_cols=227 Identities=29% Similarity=0.436 Sum_probs=205.7
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhC
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 88 (249)
.|+||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++ +.++.++++|++|+++++++++++.++||
T Consensus 26 rL~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~---g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G 102 (273)
T 4fgs_A 26 RLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEI---GGGAVGIQADSANLAELDRLYEKVKAEAG 102 (273)
T ss_dssp TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CTTCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred hhCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc---CCCeEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 389999999999999999999999999999999999999888887776 56788999999999999999999999999
Q ss_pred CccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchh
Q 025672 89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH 168 (249)
Q Consensus 89 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~ 168 (249)
+||++|||||+....++.+.+.++|++.+++|+.|+++++|+++|.|++. |+||++||..+..+.++...
T Consensus 103 ~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~----------G~IInisS~~~~~~~~~~~~ 172 (273)
T 4fgs_A 103 RIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARG----------SSVVLTGSTAGSTGTPAFSV 172 (273)
T ss_dssp CEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEE----------EEEEEECCGGGGSCCTTCHH
T ss_pred CCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhC----------CeEEEEeehhhccCCCCchH
Confidence 99999999999888999999999999999999999999999999999653 88999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCC-----hHHHHHhhhhhhcccCCCCHHHHHHHHHHh
Q 025672 169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA-----PEEIRSKATDYMAAYKFGEKWDIAMAALYL 243 (249)
Q Consensus 169 y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~dva~~v~~l 243 (249)
|++||+|+.+|+|+||.||+ ++|||||+|+||+|+|++...... .++..+.+...+|++|+++|||||++++||
T Consensus 173 Y~asKaav~~ltr~lA~Ela-~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~peeiA~~v~FL 251 (273)
T 4fgs_A 173 YAASKAALRSFARNWILDLK-DRGIRINTLSPGPTETTGLVELAGKDPVQQQGLLNALAAQVPMGRVGRAEEVAAAALFL 251 (273)
T ss_dssp HHHHHHHHHHHHHHHHHHTT-TSCEEEEEEEECSBCC---------CHHHHHHHHHHHHHHSTTSSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhc-ccCeEEEEEeeCCCCChhHHHhhccCchhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence 99999999999999999999 999999999999999887654332 234556677889999999999999999999
Q ss_pred ccCCCC
Q 025672 244 ASDAGQ 249 (249)
Q Consensus 244 ~s~~a~ 249 (249)
+||+++
T Consensus 252 aSd~a~ 257 (273)
T 4fgs_A 252 ASDDSS 257 (273)
T ss_dssp HSGGGT
T ss_pred hCchhc
Confidence 999874
|
| >4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-55 Score=350.43 Aligned_cols=223 Identities=29% Similarity=0.388 Sum_probs=198.1
Q ss_pred CCCCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHH
Q 025672 5 FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTI 84 (249)
Q Consensus 5 ~~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 84 (249)
.....++||++|||||++|||+++|++|+++|++|++++|+.+.+++ ..+.++..+++|++|+++++++++
T Consensus 4 f~~dlf~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~------~~~~~~~~~~~Dv~~~~~v~~~~~--- 74 (242)
T 4b79_A 4 FQHDIYAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHA------PRHPRIRREELDITDSQRLQRLFE--- 74 (242)
T ss_dssp BCTTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTS------CCCTTEEEEECCTTCHHHHHHHHH---
T ss_pred CCCCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhh------hhcCCeEEEEecCCCHHHHHHHHH---
Confidence 34455799999999999999999999999999999999999876543 335679999999999999988875
Q ss_pred HHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCc
Q 025672 85 NHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW 164 (249)
Q Consensus 85 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~ 164 (249)
++|++|++|||||+.. ++.+.+.++|++.+++|+.++++++|+++|+|+++ +|+||++||..+..+.+
T Consensus 75 -~~g~iDiLVNNAGi~~--~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~---------~G~IVnisS~~~~~~~~ 142 (242)
T 4b79_A 75 -ALPRLDVLVNNAGISR--DREEYDLATFERVLRLNLSAAMLASQLARPLLAQR---------GGSILNIASMYSTFGSA 142 (242)
T ss_dssp -HCSCCSEEEECCCCCC--GGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHH---------CEEEEEECCGGGTSCCS
T ss_pred -hcCCCCEEEECCCCCC--CcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc---------CCeEEEEeeccccCCCC
Confidence 5799999999999754 56788999999999999999999999999999765 39999999999999999
Q ss_pred cchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhc
Q 025672 165 YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLA 244 (249)
Q Consensus 165 ~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~ 244 (249)
+...|++||+|+.+|+|+||.||+ ++|||||+|+||+|+|++......+++..+.+.+.+|++|+++|||||++++||+
T Consensus 143 ~~~~Y~asKaav~~ltr~lA~Ela-~~gIrVNaV~PG~i~T~m~~~~~~~~~~~~~~~~~~PlgR~g~peeiA~~v~fLa 221 (242)
T 4b79_A 143 DRPAYSASKGAIVQLTRSLACEYA-AERIRVNAIAPGWIDTPLGAGLKADVEATRRIMQRTPLARWGEAPEVASAAAFLC 221 (242)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCCC-----CCCHHHHHHHHHTCTTCSCBCHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhh-hcCeEEEEEEeCCCCChhhhcccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh
Confidence 999999999999999999999999 9999999999999999877666666677788889999999999999999999999
Q ss_pred cCCCC
Q 025672 245 SDAGQ 249 (249)
Q Consensus 245 s~~a~ 249 (249)
||+++
T Consensus 222 Sd~a~ 226 (242)
T 4b79_A 222 GPGAS 226 (242)
T ss_dssp SGGGT
T ss_pred Cchhc
Confidence 99875
|
| >4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-55 Score=353.83 Aligned_cols=230 Identities=27% Similarity=0.300 Sum_probs=203.5
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
++|+||++|||||++|||+++|++|+++|++|++++|+.+..+ ..+++...+.++.+++||++|+++++++++++.++|
T Consensus 3 ~~L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~-~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~ 81 (258)
T 4gkb_A 3 LNLQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGA-FLDALAQRQPRATYLPVELQDDAQCRDAVAQTIATF 81 (258)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHH-HHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHH-HHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHHHh
Confidence 6799999999999999999999999999999999999988754 445566667889999999999999999999999999
Q ss_pred CCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch
Q 025672 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 167 (249)
Q Consensus 88 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~ 167 (249)
|++|++|||||+....+ .+.+.++|++.+++|+.++++++|+++|+|+++ +|+||++||..+..+.++..
T Consensus 82 G~iDiLVNnAGi~~~~~-~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~---------~G~IVnisS~~~~~~~~~~~ 151 (258)
T 4gkb_A 82 GRLDGLVNNAGVNDGIG-LDAGRDAFVASLERNLIHYYAMAHYCVPHLKAT---------RGAIVNISSKTAVTGQGNTS 151 (258)
T ss_dssp SCCCEEEECCCCCCCCC-TTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH---------TCEEEEECCTHHHHCCSSCH
T ss_pred CCCCEEEECCCCCCCCC-ccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc---------CCeEEEEeehhhccCCCCch
Confidence 99999999999865444 478999999999999999999999999999765 38999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCC----hHHHHHhhhhhhccc-CCCCHHHHHHHHHH
Q 025672 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA----PEEIRSKATDYMAAY-KFGEKWDIAMAALY 242 (249)
Q Consensus 168 ~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~----~~~~~~~~~~~~~~~-~~~~~~dva~~v~~ 242 (249)
.|++||+|+.+|+|++|.||+ ++|||||+|+||+|+|++...... ++...+.+...+|++ |+++|||||++++|
T Consensus 152 ~Y~asKaav~~ltr~lA~ela-~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~plg~R~g~peeiA~~v~f 230 (258)
T 4gkb_A 152 GYCASKGAQLALTREWAVALR-EHGVRVNAVIPAEVMTPLYRNWIATFEDPEAKLAEIAAKVPLGRRFTTPDEIADTAVF 230 (258)
T ss_dssp HHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECSBCCSCC-----------CHHHHHHTTCTTTTSCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhc-ccCeEEEEEecCCCCChhHhhhhhcccChHHHHHHHHhcCCCCCCCcCHHHHHHHHHH
Confidence 999999999999999999999 999999999999999987654322 234455677788885 99999999999999
Q ss_pred hccCCCC
Q 025672 243 LASDAGQ 249 (249)
Q Consensus 243 l~s~~a~ 249 (249)
|+||+++
T Consensus 231 LaS~~a~ 237 (258)
T 4gkb_A 231 LLSPRAS 237 (258)
T ss_dssp HHSGGGT
T ss_pred HhCchhc
Confidence 9999874
|
| >4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-53 Score=344.73 Aligned_cols=231 Identities=23% Similarity=0.250 Sum_probs=211.9
Q ss_pred CCCCCcEEEEecCCC--chhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcC-CCeeEEEccCCCHHHHHHHHHHHH
Q 025672 8 DILKGKVALLTGGGS--GIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG-IPAIGLEGDVRKREDAVRVVESTI 84 (249)
Q Consensus 8 ~~l~~k~~lItGa~~--giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~ 84 (249)
++|+||++|||||+| |||+++|++|+++|++|++++|+++.++++.+++.+.+ .++.+++||++|+++++++++++.
T Consensus 2 ~~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 81 (256)
T 4fs3_A 2 LNLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIG 81 (256)
T ss_dssp CCCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHH
T ss_pred cCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHH
Confidence 579999999999875 99999999999999999999999999999999887654 478999999999999999999999
Q ss_pred HHhCCccEEEEcCCCCCC----CCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccc
Q 025672 85 NHFGKLDILVNAAAGNFL----VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY 160 (249)
Q Consensus 85 ~~~~~id~vi~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~ 160 (249)
+++|++|++|||||+... .++.+.+.++|...+++|+.+++.+++.+.+.+.+ +|+||++||..+.
T Consensus 82 ~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~----------~G~IVnisS~~~~ 151 (256)
T 4fs3_A 82 KDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPE----------GGSIVATTYLGGE 151 (256)
T ss_dssp HHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTT----------CEEEEEEECGGGT
T ss_pred HHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhcc----------CCEEEEEeccccc
Confidence 999999999999998643 45567888999999999999999999999887644 3999999999999
Q ss_pred ccCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHH
Q 025672 161 TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAA 240 (249)
Q Consensus 161 ~~~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v 240 (249)
.+.++...|++||+|+.+|+|+|+.||+ ++|||||+|+||+++|++.......++..+.+.+.+|++|+++|||||+++
T Consensus 152 ~~~~~~~~Y~asKaal~~ltr~lA~Ela-~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~Pl~R~g~peevA~~v 230 (256)
T 4fs3_A 152 FAVQNYNVMGVAKASLEANVKYLALDLG-PDNIRVNAISAGPIRTLSAKGVGGFNTILKEIKERAPLKRNVDQVEVGKTA 230 (256)
T ss_dssp SCCTTTHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECCCCSGGGTTCTTHHHHHHHHHHHSTTSSCCCHHHHHHHH
T ss_pred cCcccchhhHHHHHHHHHHHHHHHHHhC-ccCeEEEEEecCCCCChhhhhccCCHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence 9999999999999999999999999999 999999999999999987766666778888889999999999999999999
Q ss_pred HHhccCCCC
Q 025672 241 LYLASDAGQ 249 (249)
Q Consensus 241 ~~l~s~~a~ 249 (249)
+||+||+++
T Consensus 231 ~fL~Sd~a~ 239 (256)
T 4fs3_A 231 AYLLSDLSS 239 (256)
T ss_dssp HHHHSGGGT
T ss_pred HHHhCchhc
Confidence 999999874
|
| >3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-53 Score=340.05 Aligned_cols=213 Identities=24% Similarity=0.309 Sum_probs=194.3
Q ss_pred cEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCccE
Q 025672 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI 92 (249)
Q Consensus 13 k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ 92 (249)
|++|||||++|||+++|++|+++|++|++++|+++.++++.+ .+.++.+++||++|+++++++++++.++||+||+
T Consensus 3 K~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~----~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iDi 78 (247)
T 3ged_A 3 RGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAK----ERPNLFYFHGDVADPLTLKKFVEYAMEKLQRIDV 78 (247)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHT----TCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----hcCCEEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 999999999999999999999999999999999876665443 3567899999999999999999999999999999
Q ss_pred EEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhhHHH
Q 025672 93 LVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAA 172 (249)
Q Consensus 93 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~~s 172 (249)
+|||||.....++.+.+.++|++++++|+.++++++|+++|.|.++ +|+||++||..+..+.++...|++|
T Consensus 79 LVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~---------~G~IInisS~~~~~~~~~~~~Y~as 149 (247)
T 3ged_A 79 LVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKN---------KGRIINIASTRAFQSEPDSEAYASA 149 (247)
T ss_dssp EEECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT---------TCEEEEECCGGGTSCCTTCHHHHHH
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc---------CCcEEEEeecccccCCCCCHHHHHH
Confidence 9999999888899999999999999999999999999999999875 3899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhccC
Q 025672 173 KAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246 (249)
Q Consensus 173 K~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~ 246 (249)
|+|+.+|+|+||.||+ + |||||+|+||+|+|++.. ++.+.....+|++|+++|||||++++||+|+
T Consensus 150 Kaal~~ltk~lA~ela-~-~IrVN~I~PG~i~t~~~~------~~~~~~~~~~Pl~R~g~pediA~~v~fL~s~ 215 (247)
T 3ged_A 150 KGGIVALTHALAMSLG-P-DVLVNCIAPGWINVTEQQ------EFTQEDCAAIPAGKVGTPKDISNMVLFLCQQ 215 (247)
T ss_dssp HHHHHHHHHHHHHHHT-T-TSEEEEEEECSBCCCC---------CCHHHHHTSTTSSCBCHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHC-C-CCEEEEEecCcCCCCCcH------HHHHHHHhcCCCCCCcCHHHHHHHHHHHHhC
Confidence 9999999999999998 7 999999999999987532 2334455678999999999999999999985
|
| >4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-53 Score=344.05 Aligned_cols=226 Identities=20% Similarity=0.232 Sum_probs=198.3
Q ss_pred CCCCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHH
Q 025672 5 FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTI 84 (249)
Q Consensus 5 ~~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 84 (249)
+..++|+||++|||||++|||+++|++|+++|++|++++|+.++ ...+..++++|++|+++++++++++.
T Consensus 4 ~dl~~L~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~----------~~~~~~~~~~Dv~~~~~v~~~~~~~~ 73 (261)
T 4h15_A 4 IEFLNLRGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPE----------GLPEELFVEADLTTKEGCAIVAEATR 73 (261)
T ss_dssp CCCCCCTTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCT----------TSCTTTEEECCTTSHHHHHHHHHHHH
T ss_pred hhccCCCCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchh----------CCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence 45578999999999999999999999999999999999998652 12345688999999999999999999
Q ss_pred HHhCCccEEEEcCCCCC--CCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc
Q 025672 85 NHFGKLDILVNAAAGNF--LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 162 (249)
Q Consensus 85 ~~~~~id~vi~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~ 162 (249)
++||++|++|||||+.. ..++.+.+.++|++.+++|+.++++++|+++|.|.+++. |+||++||..+..+
T Consensus 74 ~~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~--------G~Iv~isS~~~~~~ 145 (261)
T 4h15_A 74 QRLGGVDVIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGS--------GVVVHVTSIQRVLP 145 (261)
T ss_dssp HHTSSCSEEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--------EEEEEECCGGGTSC
T ss_pred HHcCCCCEEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCC--------ceEEEEEehhhccC
Confidence 99999999999999754 357889999999999999999999999999999988764 99999999999988
Q ss_pred Cc-cchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCC---------CCh---HHHHHhhhhhhcccC
Q 025672 163 TW-YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK---------LAP---EEIRSKATDYMAAYK 229 (249)
Q Consensus 163 ~~-~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~---------~~~---~~~~~~~~~~~~~~~ 229 (249)
.+ +...|++||+|+.+|+|+|+.||+ ++|||||+|+||+|+|++.... ... ++..+.....+|++|
T Consensus 146 ~~~~~~~Y~asKaal~~lt~~lA~Ela-~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR 224 (261)
T 4h15_A 146 LPESTTAYAAAKAALSTYSKAMSKEVS-PKGVRVVRVSPGWIETEASVRLAERLAKQAGTDLEGGKKIIMDGLGGIPLGR 224 (261)
T ss_dssp CTTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECCBCCHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCCTTSS
T ss_pred CCCccHHHHHHHHHHHHHHHHHHHHhh-hhCeEEEEEeCCCcCCcchhhhhHHHHHhhccchhhHHHHHHHHhcCCCCCC
Confidence 76 578999999999999999999999 9999999999999998754321 111 233444566789999
Q ss_pred CCCHHHHHHHHHHhccCCCC
Q 025672 230 FGEKWDIAMAALYLASDAGQ 249 (249)
Q Consensus 230 ~~~~~dva~~v~~l~s~~a~ 249 (249)
+++|||||++++||+||+++
T Consensus 225 ~g~peevA~~v~fLaS~~a~ 244 (261)
T 4h15_A 225 PAKPEEVANLIAFLASDRAA 244 (261)
T ss_dssp CBCHHHHHHHHHHHHSGGGT
T ss_pred CcCHHHHHHHHHHHhCchhc
Confidence 99999999999999999874
|
| >3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-50 Score=327.42 Aligned_cols=233 Identities=32% Similarity=0.441 Sum_probs=214.0
Q ss_pred CCCCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHH
Q 025672 5 FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTI 84 (249)
Q Consensus 5 ~~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 84 (249)
...+++++|++|||||++|||++++++|+++|++|++++|+.+.++++.+++...+.++.++++|++|+++++++++++.
T Consensus 5 ~~~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 84 (256)
T 3gaf_A 5 ESPFHLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAAL 84 (256)
T ss_dssp -CTTCCTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred cCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHH
Confidence 34567899999999999999999999999999999999999999999999998888899999999999999999999999
Q ss_pred HHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCc
Q 025672 85 NHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW 164 (249)
Q Consensus 85 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~ 164 (249)
+.++++|++|||||.....++ +.+.++|+..+++|+.++++++++++|.|.+++. |+||++||..+..+.+
T Consensus 85 ~~~g~id~lv~nAg~~~~~~~-~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~--------g~iv~isS~~~~~~~~ 155 (256)
T 3gaf_A 85 DQFGKITVLVNNAGGGGPKPF-DMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGG--------GAILNISSMAGENTNV 155 (256)
T ss_dssp HHHSCCCEEEECCCCCCCCCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTC--------EEEEEECCGGGTCCCT
T ss_pred HHcCCCCEEEECCCCCCCCCC-CCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC--------cEEEEEcCHHHcCCCC
Confidence 999999999999999877777 8899999999999999999999999999987653 8999999999999999
Q ss_pred cchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhc
Q 025672 165 YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLA 244 (249)
Q Consensus 165 ~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~ 244 (249)
+...|++||+|+++|+++++.|++ ++||+||+|+||+++|++..... .++..+.+....|++|+++|+|+|++++||+
T Consensus 156 ~~~~Y~asKaa~~~~~~~la~e~~-~~gi~vn~v~PG~v~T~~~~~~~-~~~~~~~~~~~~p~~r~~~~~dva~~~~~L~ 233 (256)
T 3gaf_A 156 RMASYGSSKAAVNHLTRNIAFDVG-PMGIRVNAIAPGAIKTDALATVL-TPEIERAMLKHTPLGRLGEAQDIANAALFLC 233 (256)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECCBCCHHHHHHC-CHHHHHHHHTTCTTSSCBCHHHHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHHHHHHHHHh-hhCcEEEEEEEccccCchhhhcc-CHHHHHHHHhcCCCCCCCCHHHHHHHHHHHc
Confidence 999999999999999999999998 88999999999999987654333 3455666777889999999999999999999
Q ss_pred cCCC
Q 025672 245 SDAG 248 (249)
Q Consensus 245 s~~a 248 (249)
|+++
T Consensus 234 s~~~ 237 (256)
T 3gaf_A 234 SPAA 237 (256)
T ss_dssp SGGG
T ss_pred CCcc
Confidence 9875
|
| >3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-50 Score=327.21 Aligned_cols=234 Identities=27% Similarity=0.363 Sum_probs=214.3
Q ss_pred CCCCCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcC-CCeeEEEccCCCHHHHHHHHHH
Q 025672 4 PFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG-IPAIGLEGDVRKREDAVRVVES 82 (249)
Q Consensus 4 ~~~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~ 82 (249)
|.+.+++++|++|||||++|||++++++|+++|++|++++|+.++++++.+++...+ .++.++++|++|++++++++++
T Consensus 2 p~~m~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~ 81 (262)
T 3pk0_A 2 PGSMFDLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGR 81 (262)
T ss_dssp -CCTTCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHH
T ss_pred CCCccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHH
Confidence 556678999999999999999999999999999999999999999999999998766 6899999999999999999999
Q ss_pred HHHHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccc-c
Q 025672 83 TINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY-T 161 (249)
Q Consensus 83 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~-~ 161 (249)
+.++++++|++|||||.....++.+.+.++|++.+++|+.++++++++++|.|.+++. |+||++||..+. .
T Consensus 82 ~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~--------g~iv~isS~~~~~~ 153 (262)
T 3pk0_A 82 AVEEFGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGS--------GRVVLTSSITGPIT 153 (262)
T ss_dssp HHHHHSCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSS--------CEEEEECCSBTTTB
T ss_pred HHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC--------cEEEEEechhhccC
Confidence 9999999999999999988888999999999999999999999999999999987653 899999999886 7
Q ss_pred cCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHH
Q 025672 162 ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAAL 241 (249)
Q Consensus 162 ~~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~ 241 (249)
+.++...|++||+++++|+++++.|++ ++||+||+|+||+++|++.... .++..+.+....|.+|+++|+|+|+++.
T Consensus 154 ~~~~~~~Y~asK~a~~~l~~~la~e~~-~~gi~vn~v~PG~v~t~~~~~~--~~~~~~~~~~~~p~~r~~~p~dva~~v~ 230 (262)
T 3pk0_A 154 GYPGWSHYGATKAAQLGFMRTAAIELA-PHKITVNAIMPGNIMTEGLLEN--GEEYIASMARSIPAGALGTPEDIGHLAA 230 (262)
T ss_dssp CCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECSBCCHHHHTT--CHHHHHHHHTTSTTSSCBCHHHHHHHHH
T ss_pred CCCCChhhHHHHHHHHHHHHHHHHHHH-hhCcEEEEEEeCcCcCcccccc--CHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence 888899999999999999999999998 8899999999999998765432 3455667778889999999999999999
Q ss_pred HhccCCC
Q 025672 242 YLASDAG 248 (249)
Q Consensus 242 ~l~s~~a 248 (249)
||+|+++
T Consensus 231 ~L~s~~~ 237 (262)
T 3pk0_A 231 FLATKEA 237 (262)
T ss_dssp HHHSGGG
T ss_pred HHhCccc
Confidence 9999875
|
| >3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-50 Score=327.85 Aligned_cols=235 Identities=24% Similarity=0.275 Sum_probs=209.3
Q ss_pred CCCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHh-cCC-CeeEEEccCCCHHHHHHHHHHH
Q 025672 6 KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHS-LGI-PAIGLEGDVRKREDAVRVVEST 83 (249)
Q Consensus 6 ~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~-~~~-~~~~~~~Dl~~~~~~~~~~~~~ 83 (249)
.++++++|++|||||++|||++++++|+++|++|++++|+.++++++.+++.. .+. ++.++.+|++|+++++++++++
T Consensus 2 ~~~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 81 (265)
T 3lf2_A 2 KPYDLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEAC 81 (265)
T ss_dssp -CCCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CccCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHH
Confidence 45789999999999999999999999999999999999999999999888875 333 5899999999999999999999
Q ss_pred HHHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC
Q 025672 84 INHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT 163 (249)
Q Consensus 84 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~ 163 (249)
.+.++++|++|||||.....++.+.+.++|++.+++|+.++++++++++|.|.+++. |+||++||..+..+.
T Consensus 82 ~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~--------g~iv~isS~~~~~~~ 153 (265)
T 3lf2_A 82 ERTLGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRAD--------AAIVCVNSLLASQPE 153 (265)
T ss_dssp HHHHCSCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTT--------EEEEEEEEGGGTSCC
T ss_pred HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC--------eEEEEECCcccCCCC
Confidence 999999999999999988888999999999999999999999999999999987653 899999999999999
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCC--------ChHHHHHhhhhh--hcccCCCCH
Q 025672 164 WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL--------APEEIRSKATDY--MAAYKFGEK 233 (249)
Q Consensus 164 ~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~--------~~~~~~~~~~~~--~~~~~~~~~ 233 (249)
++...|++||+|+.+|+++++.|++ ++||+||+|+||+|+|++..... ..+...+..... .|++|+++|
T Consensus 154 ~~~~~Y~asKaa~~~l~~~la~e~~-~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p 232 (265)
T 3lf2_A 154 PHMVATSAARAGVKNLVRSMAFEFA-PKGVRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARNKQIPLGRLGKP 232 (265)
T ss_dssp TTBHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCCHHHHHHHTC------CHHHHHHHHHHHTTCTTCSCBCH
T ss_pred CCchhhHHHHHHHHHHHHHHHHHhc-ccCeEEEEEEeCcCcCchhhhhhhhhhhhccCHHHHHHHHhhccCCCcCCCcCH
Confidence 9999999999999999999999998 89999999999999987643321 222333333332 899999999
Q ss_pred HHHHHHHHHhccCCCC
Q 025672 234 WDIAMAALYLASDAGQ 249 (249)
Q Consensus 234 ~dva~~v~~l~s~~a~ 249 (249)
+|+|++++||+|++++
T Consensus 233 edvA~~v~fL~s~~~~ 248 (265)
T 3lf2_A 233 IEAARAILFLASPLSA 248 (265)
T ss_dssp HHHHHHHHHHHSGGGT
T ss_pred HHHHHHHHHHhCchhc
Confidence 9999999999998753
|
| >3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-49 Score=324.08 Aligned_cols=231 Identities=26% Similarity=0.352 Sum_probs=214.0
Q ss_pred CCCcEEEEecCCCchhHHHHHHHHHcCCeEEEE-eCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhC
Q 025672 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIM-GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (249)
Q Consensus 10 l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~-~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 88 (249)
.++|++|||||++|||++++++|+++|++|+++ +|+.+.++++.+++...+.++.++++|++|+++++++++++.+.++
T Consensus 2 ~~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 81 (258)
T 3oid_A 2 EQNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFG 81 (258)
T ss_dssp -CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 368999999999999999999999999999986 8998889999999988888999999999999999999999999999
Q ss_pred CccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchh
Q 025672 89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH 168 (249)
Q Consensus 89 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~ 168 (249)
++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|.+++. |+||++||..+..+.++...
T Consensus 82 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~--------g~iv~isS~~~~~~~~~~~~ 153 (258)
T 3oid_A 82 RLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGG--------GHIVSISSLGSIRYLENYTT 153 (258)
T ss_dssp CCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTC--------EEEEEEEEGGGTSBCTTCHH
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC--------cEEEEECchhhCCCCCCcHH
Confidence 9999999999887788889999999999999999999999999999988653 89999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhccCCC
Q 025672 169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAG 248 (249)
Q Consensus 169 y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~a 248 (249)
|++||+|+.+|+++++.|++ ++||+||+|+||+++|++.......++..+.+....|.+|+++|+|+|++++||+|+++
T Consensus 154 Y~asKaa~~~l~~~la~e~~-~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~~L~s~~~ 232 (258)
T 3oid_A 154 VGVSKAALEALTRYLAVELS-PKQIIVNAVSGGAIDTDALKHFPNREDLLEDARQNTPAGRMVEIKDMVDTVEFLVSSKA 232 (258)
T ss_dssp HHHHHHHHHHHHHHHHHHTG-GGTEEEEEEEECCBCSGGGGGCTTHHHHHHHHHHHCTTSSCBCHHHHHHHHHHHTSSTT
T ss_pred HHHHHHHHHHHHHHHHHHHh-hcCcEEEEEeeCCCcChhhhhcccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccc
Confidence 99999999999999999998 88999999999999988766555556667777888999999999999999999999876
Q ss_pred C
Q 025672 249 Q 249 (249)
Q Consensus 249 ~ 249 (249)
+
T Consensus 233 ~ 233 (258)
T 3oid_A 233 D 233 (258)
T ss_dssp T
T ss_pred C
Confidence 3
|
| >4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-50 Score=328.10 Aligned_cols=233 Identities=26% Similarity=0.353 Sum_probs=214.2
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHh-cCCCeeEEEccCCCHHHHHHHHHHHHHH
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHS-LGIPAIGLEGDVRKREDAVRVVESTINH 86 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 86 (249)
+.+++|++|||||++|||++++++|+++|++|++++|+.+++++..+++.. .+.++.++++|++|+++++++++++.+.
T Consensus 16 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 95 (266)
T 4egf_A 16 LRLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEA 95 (266)
T ss_dssp GCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHH
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 458999999999999999999999999999999999999999998888865 5778999999999999999999999999
Q ss_pred hCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccc
Q 025672 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ 166 (249)
Q Consensus 87 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~ 166 (249)
++++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|.+++. +|+||++||..+..+.++.
T Consensus 96 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~-------~g~iv~isS~~~~~~~~~~ 168 (266)
T 4egf_A 96 FGGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGE-------GGAIITVASAAALAPLPDH 168 (266)
T ss_dssp HTSCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTS-------CEEEEEECCGGGTSCCTTC
T ss_pred cCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC-------CeEEEEEcchhhccCCCCC
Confidence 999999999999988888889999999999999999999999999999987642 3899999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhccC
Q 025672 167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246 (249)
Q Consensus 167 ~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~ 246 (249)
..|++||+|+.+|+++++.|++ ++||+||+|+||+|+|++.......+.....+....|++|+++|+|+|++++||+|+
T Consensus 169 ~~Y~asK~a~~~l~~~la~e~~-~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~~L~s~ 247 (266)
T 4egf_A 169 YAYCTSKAGLVMATKVLARELG-PHGIRANSVCPTVVLTEMGQRVWGDEAKSAPMIARIPLGRFAVPHEVSDAVVWLASD 247 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEESCBCSHHHHHHTCSHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSG
T ss_pred hHHHHHHHHHHHHHHHHHHHHh-hhCeEEEEEEeCCCcCchhhhhccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCc
Confidence 9999999999999999999998 889999999999999887654444455666677888999999999999999999998
Q ss_pred CC
Q 025672 247 AG 248 (249)
Q Consensus 247 ~a 248 (249)
++
T Consensus 248 ~~ 249 (266)
T 4egf_A 248 AA 249 (266)
T ss_dssp GG
T ss_pred hh
Confidence 75
|
| >4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-50 Score=329.38 Aligned_cols=232 Identities=25% Similarity=0.366 Sum_probs=214.7
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
+++++|++|||||++|||+++|++|+++|++|++++|+.+.++++.+++...+.++.++++|++|+++++++++++.+.+
T Consensus 22 ~~l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 101 (271)
T 4ibo_A 22 FDLGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQG 101 (271)
T ss_dssp GCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHHT
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHC
Confidence 56889999999999999999999999999999999999999999999998888899999999999999999999999999
Q ss_pred CCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch
Q 025672 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 167 (249)
Q Consensus 88 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~ 167 (249)
+++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|.+++. |+||++||..+..+.++..
T Consensus 102 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~--------g~iV~isS~~~~~~~~~~~ 173 (271)
T 4ibo_A 102 IDVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGY--------GKIVNIGSLTSELARATVA 173 (271)
T ss_dssp CCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--------EEEEEECCGGGTSBCTTCH
T ss_pred CCCCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC--------cEEEEEccHHhCCCCCCch
Confidence 99999999999988888889999999999999999999999999999987653 8999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhccCC
Q 025672 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247 (249)
Q Consensus 168 ~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~ 247 (249)
.|++||+|+.+|+++++.|++ ++||+||+|+||+|+|++.......++..+.+....|.+|+++|+|+|++++||++++
T Consensus 174 ~Y~asKaa~~~l~~~la~e~~-~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~v~~L~s~~ 252 (271)
T 4ibo_A 174 PYTVAKGGIKMLTRAMAAEWA-QYGIQANAIGPGYMLTDMNQALIDNPEFDAWVKARTPAKRWGKPQELVGTAVFLSASA 252 (271)
T ss_dssp HHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCSGGGHHHHHCHHHHHHHHHHSTTCSCBCGGGGHHHHHHHHSGG
T ss_pred hHHHHHHHHHHHHHHHHHHHh-hhCeEEEEEEeccEeCcchhhcccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcc
Confidence 999999999999999999998 8999999999999998765433333455666778899999999999999999999987
Q ss_pred C
Q 025672 248 G 248 (249)
Q Consensus 248 a 248 (249)
+
T Consensus 253 ~ 253 (271)
T 4ibo_A 253 S 253 (271)
T ss_dssp G
T ss_pred c
Confidence 5
|
| >3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-49 Score=325.22 Aligned_cols=234 Identities=31% Similarity=0.400 Sum_probs=206.4
Q ss_pred CCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHH
Q 025672 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (249)
Q Consensus 7 ~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 86 (249)
.+.+++|++|||||++|||+++|++|+++|++|++++|+.+.++++.+++...+.++.++++|++|+++++++++++.+.
T Consensus 23 m~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 102 (283)
T 3v8b_A 23 MMNQPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLK 102 (283)
T ss_dssp ----CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred hcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 45688999999999999999999999999999999999999999999999887889999999999999999999999999
Q ss_pred hCCccEEEEcCCCCCC-CCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc--cC
Q 025672 87 FGKLDILVNAAAGNFL-VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT--AT 163 (249)
Q Consensus 87 ~~~id~vi~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~--~~ 163 (249)
+|++|++|||||+... .++.+.+.++|++.+++|+.++++++++++|.|.+++. |+||++||..+.. +.
T Consensus 103 ~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~--------g~Iv~isS~~~~~~~~~ 174 (283)
T 3v8b_A 103 FGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRGG--------GAIVVVSSINGTRTFTT 174 (283)
T ss_dssp HSCCCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--------EEEEEECCSBTTTBCCS
T ss_pred hCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCC--------ceEEEEcChhhccCCCC
Confidence 9999999999998654 78889999999999999999999999999999987653 8999999999877 77
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHH-----HHhhhhhhcc--cCCCCHHHH
Q 025672 164 WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEI-----RSKATDYMAA--YKFGEKWDI 236 (249)
Q Consensus 164 ~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~-----~~~~~~~~~~--~~~~~~~dv 236 (249)
++...|++||+|+.+|+++++.|++ ++||+||+|+||+|+|++.......... .+......|. +|+++|||+
T Consensus 175 ~~~~~Y~asKaa~~~l~~~la~e~~-~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~r~~~pedv 253 (283)
T 3v8b_A 175 PGATAYTATKAAQVAIVQQLALELG-KHHIRVNAVCPGAIETNISDNTKLRHEEETAIPVEWPKGQVPITDGQPGRSEDV 253 (283)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHTT-TTTEEEEEEEECSBSSCTTCCTTBCCHHHHSCCCBCTTCSCGGGTTCCBCHHHH
T ss_pred CCchHHHHHHHHHHHHHHHHHHHhC-ccCcEEEEEEeCCCcCCcccccccccchhhhhhhhhhhhcCccccCCCCCHHHH
Confidence 8899999999999999999999998 8999999999999998865443221111 2233455666 899999999
Q ss_pred HHHHHHhccCCCC
Q 025672 237 AMAALYLASDAGQ 249 (249)
Q Consensus 237 a~~v~~l~s~~a~ 249 (249)
|++++||+|++++
T Consensus 254 A~~v~fL~s~~a~ 266 (283)
T 3v8b_A 254 AELIRFLVSERAR 266 (283)
T ss_dssp HHHHHHHTSGGGT
T ss_pred HHHHHHHcCcccc
Confidence 9999999998763
|
| >3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-49 Score=323.19 Aligned_cols=234 Identities=41% Similarity=0.629 Sum_probs=208.8
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
..|++|++|||||++|||++++++|+++|++|++++|+.+.++++.+++...+.++.++++|++|+++++++++++.+.+
T Consensus 2 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 81 (257)
T 3imf_A 2 NAMKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKF 81 (257)
T ss_dssp CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 45789999999999999999999999999999999999999999999998778889999999999999999999999999
Q ss_pred CCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch
Q 025672 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 167 (249)
Q Consensus 88 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~ 167 (249)
+++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|.++.. .|+||++||..+..+.++..
T Consensus 82 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~-------~g~iv~isS~~~~~~~~~~~ 154 (257)
T 3imf_A 82 GRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGI-------KGNIINMVATYAWDAGPGVI 154 (257)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC-------CCEEEEECCGGGGSCCTTCH
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCC-------CcEEEEECchhhccCCCCcH
Confidence 99999999999888788889999999999999999999999999999955432 38999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCC-ChHHHHHhhhhhhcccCCCCHHHHHHHHHHhccC
Q 025672 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL-APEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246 (249)
Q Consensus 168 ~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~ 246 (249)
.|++||+|+.+|+++++.|+++++||+||+|+||+|+|++..... ..++..+.+....|++|+.+|||+|++++||+|+
T Consensus 155 ~Y~asKaa~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~ 234 (257)
T 3imf_A 155 HSAAAKAGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWISEEMAKRTIQSVPLGRLGTPEEIAGLAYYLCSD 234 (257)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCCCC-------CCSHHHHTTSTTCSCBCHHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHHHHHHHHHhccccCeEEEEEEECCCcCCcchhhcccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCc
Confidence 999999999999999999995245999999999999988654332 2233445566778999999999999999999998
Q ss_pred CC
Q 025672 247 AG 248 (249)
Q Consensus 247 ~a 248 (249)
++
T Consensus 235 ~~ 236 (257)
T 3imf_A 235 EA 236 (257)
T ss_dssp GG
T ss_pred hh
Confidence 75
|
| >3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E | Back alignment and structure |
|---|
Probab=100.00 E-value=9.8e-49 Score=318.25 Aligned_cols=228 Identities=28% Similarity=0.333 Sum_probs=207.7
Q ss_pred CCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHH
Q 025672 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (249)
Q Consensus 7 ~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 86 (249)
.+++++|++|||||++|||++++++|+++|++|++++|+.+.++++.+++.. +..++++|++|+++++++++++.+.
T Consensus 4 ~~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~Dv~d~~~v~~~~~~~~~~ 80 (248)
T 3op4_A 4 FMNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGD---NGKGMALNVTNPESIEAVLKAITDE 80 (248)
T ss_dssp TTCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGG---GEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcc---cceEEEEeCCCHHHHHHHHHHHHHH
Confidence 3568999999999999999999999999999999999999988888887753 5788999999999999999999999
Q ss_pred hCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccc
Q 025672 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ 166 (249)
Q Consensus 87 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~ 166 (249)
+|++|++|||||+....++.+.+.++|++.+++|+.++++++++++|.|.+++. |+||++||..+..+.++.
T Consensus 81 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~--------g~iv~isS~~~~~~~~~~ 152 (248)
T 3op4_A 81 FGGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQ--------GRIINVGSVVGTMGNAGQ 152 (248)
T ss_dssp HCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--------EEEEEECCHHHHHCCTTC
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCC--------CEEEEEcchhhcCCCCCC
Confidence 999999999999988888889999999999999999999999999999987653 899999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhccC
Q 025672 167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246 (249)
Q Consensus 167 ~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~ 246 (249)
..|++||+|+.+|+++++.|++ ++||+||+|+||+++|++... . .++.........|.+|+.+|+|+|+++.||+|+
T Consensus 153 ~~Y~asK~a~~~l~~~la~e~~-~~gi~vn~v~PG~v~T~~~~~-~-~~~~~~~~~~~~p~~r~~~p~dva~~v~~L~s~ 229 (248)
T 3op4_A 153 ANYAAAKAGVIGFTKSMAREVA-SRGVTVNTVAPGFIETDMTKA-L-NDEQRTATLAQVPAGRLGDPREIASAVAFLASP 229 (248)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBSSTTTTT-S-CHHHHHHHHHTCTTCSCBCHHHHHHHHHHHHSG
T ss_pred hHHHHHHHHHHHHHHHHHHHHH-HhCeEEEEEeeCCCCCchhhh-c-CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCC
Confidence 9999999999999999999998 889999999999999875433 3 234455566778999999999999999999998
Q ss_pred CC
Q 025672 247 AG 248 (249)
Q Consensus 247 ~a 248 (249)
++
T Consensus 230 ~~ 231 (248)
T 3op4_A 230 EA 231 (248)
T ss_dssp GG
T ss_pred cc
Confidence 75
|
| >3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=9.8e-49 Score=321.07 Aligned_cols=230 Identities=22% Similarity=0.344 Sum_probs=211.6
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhC
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 88 (249)
.+++|++|||||++|||++++++|+++|++|++++|+.++++++.+++...+.++.++++|++|+++++++++++.+.++
T Consensus 8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 87 (264)
T 3ucx_A 8 LLTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAYG 87 (264)
T ss_dssp TTTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred CcCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 47899999999999999999999999999999999999999999999988888999999999999999999999999999
Q ss_pred CccEEEEcCCCC-CCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch
Q 025672 89 KLDILVNAAAGN-FLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 167 (249)
Q Consensus 89 ~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~ 167 (249)
++|++|||||.. ...++.+.+.++|++.+++|+.++++++++++|.|.++. |+||++||..+..+.++..
T Consensus 88 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~---------g~iv~isS~~~~~~~~~~~ 158 (264)
T 3ucx_A 88 RVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESK---------GAVVNVNSMVVRHSQAKYG 158 (264)
T ss_dssp CCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHT---------CEEEEECCGGGGCCCTTCH
T ss_pred CCcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC---------CEEEEECcchhccCCCccH
Confidence 999999999985 457888999999999999999999999999999998753 8899999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCC---------CChHHHHHhhhhhhcccCCCCHHHHHH
Q 025672 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK---------LAPEEIRSKATDYMAAYKFGEKWDIAM 238 (249)
Q Consensus 168 ~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~dva~ 238 (249)
.|++||+|+++|+++++.|++ ++||+||+|+||+|+|++.... ...++..+.+....|++|+.+|+|+|+
T Consensus 159 ~Y~asKaa~~~~~~~la~e~~-~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~ 237 (264)
T 3ucx_A 159 AYKMAKSALLAMSQTLATELG-EKGIRVNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAAGSDLKRLPTEDEVAS 237 (264)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH-TTTCEEEEEEESSCBSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSSSSSCCBHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhC-ccCeEEEEEecCccccccHHHHHHhhhhhcCCCHHHHHHHHhccCCcccCCCHHHHHH
Confidence 999999999999999999998 8999999999999998764332 234556667778889999999999999
Q ss_pred HHHHhccCCC
Q 025672 239 AALYLASDAG 248 (249)
Q Consensus 239 ~v~~l~s~~a 248 (249)
+++||+|+++
T Consensus 238 ~v~~L~s~~~ 247 (264)
T 3ucx_A 238 AILFMASDLA 247 (264)
T ss_dssp HHHHHHSGGG
T ss_pred HHHHHcCccc
Confidence 9999999875
|
| >3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-48 Score=322.62 Aligned_cols=232 Identities=28% Similarity=0.372 Sum_probs=211.4
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
..+++|++|||||++|||++++++|+++|++|++++|+.+.++++.+++...+.++.++.+|++|+++++++++++.+.+
T Consensus 4 ~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 83 (280)
T 3tox_A 4 SRLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRF 83 (280)
T ss_dssp CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 45889999999999999999999999999999999999999999999998778899999999999999999999999999
Q ss_pred CCccEEEEcCCCCC-CCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccc-ccCcc
Q 025672 88 GKLDILVNAAAGNF-LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY-TATWY 165 (249)
Q Consensus 88 ~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~-~~~~~ 165 (249)
+++|+||||||+.. ..++.+.+.++|++.+++|+.|+++++++++|.|.+++. |+||++||..+. .+.++
T Consensus 84 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~--------g~iv~isS~~~~~~~~~~ 155 (280)
T 3tox_A 84 GGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGG--------GSLTFTSSFVGHTAGFAG 155 (280)
T ss_dssp SCCCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTC--------EEEEEECCSBTTTBCCTT
T ss_pred CCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCC--------CEEEEEcChhhCcCCCCC
Confidence 99999999999874 578888999999999999999999999999999988653 899999999888 67888
Q ss_pred chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCC--ChHHHHHhhhhhhcccCCCCHHHHHHHHHHh
Q 025672 166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL--APEEIRSKATDYMAAYKFGEKWDIAMAALYL 243 (249)
Q Consensus 166 ~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l 243 (249)
...|++||+|+.+|+++++.|++ ++||+||+|+||+|+|++..... ..++....+....|++|+++|+|+|++++||
T Consensus 156 ~~~Y~asKaa~~~l~~~la~e~~-~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L 234 (280)
T 3tox_A 156 VAPYAASKAGLIGLVQALAVELG-ARGIRVNALLPGGTDTPANFANLPGAAPETRGFVEGLHALKRIARPEEIAEAALYL 234 (280)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHH-TTTEEEEEEEECSBSSTTSGGGSTTCCTHHHHHHHTTSTTSSCBCHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHHHHHHhh-hcCeEEEEEEECCCCCchhhhhccccCHHHHHHHhccCccCCCcCHHHHHHHHHHH
Confidence 99999999999999999999998 89999999999999988755422 2344556677788999999999999999999
Q ss_pred ccCCC
Q 025672 244 ASDAG 248 (249)
Q Consensus 244 ~s~~a 248 (249)
+++++
T Consensus 235 ~s~~a 239 (280)
T 3tox_A 235 ASDGA 239 (280)
T ss_dssp HSGGG
T ss_pred hCccc
Confidence 99875
|
| >3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-48 Score=324.03 Aligned_cols=232 Identities=28% Similarity=0.336 Sum_probs=212.2
Q ss_pred CCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcC-CCeeEEEccCCCHHHHHHHHHHHHH
Q 025672 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG-IPAIGLEGDVRKREDAVRVVESTIN 85 (249)
Q Consensus 7 ~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~ 85 (249)
.+++++|++|||||++|||++++++|+++|++|++++|+.++++++.+++...+ .++.++++|++|+++++++++++.+
T Consensus 36 m~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 115 (293)
T 3rih_A 36 MFDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVD 115 (293)
T ss_dssp TTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHH
Confidence 456889999999999999999999999999999999999999999999998766 6899999999999999999999999
Q ss_pred HhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccc-ccCc
Q 025672 86 HFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY-TATW 164 (249)
Q Consensus 86 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~-~~~~ 164 (249)
.++++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|.+++. |+||++||..+. .+.+
T Consensus 116 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~--------g~iV~isS~~~~~~~~~ 187 (293)
T 3rih_A 116 AFGALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGR--------GRVILTSSITGPVTGYP 187 (293)
T ss_dssp HHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHSS--------CEEEEECCSBTTTBBCT
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCC--------CEEEEEeChhhccCCCC
Confidence 9999999999999988888899999999999999999999999999999987654 899999999886 7888
Q ss_pred cchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhc
Q 025672 165 YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLA 244 (249)
Q Consensus 165 ~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~ 244 (249)
+...|++||+++.+|+++++.|++ ++||+||+|+||+|+|++.... . ++..+.+....|++|+++|+|+|+++.||+
T Consensus 188 ~~~~Y~asKaa~~~l~~~la~e~~-~~gI~vn~v~PG~v~t~~~~~~-~-~~~~~~~~~~~p~~r~~~p~dvA~~v~fL~ 264 (293)
T 3rih_A 188 GWSHYGASKAAQLGFMRTAAIELA-PRGVTVNAILPGNILTEGLVDM-G-EEYISGMARSIPMGMLGSPVDIGHLAAFLA 264 (293)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECSBCCHHHHHT-C-HHHHHHHHTTSTTSSCBCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHh-hhCeEEEEEecCCCcCcchhhc-c-HHHHHHHHhcCCCCCCCCHHHHHHHHHHHh
Confidence 899999999999999999999998 8899999999999998754332 2 455666778889999999999999999999
Q ss_pred cCCCC
Q 025672 245 SDAGQ 249 (249)
Q Consensus 245 s~~a~ 249 (249)
|++++
T Consensus 265 s~~a~ 269 (293)
T 3rih_A 265 TDEAG 269 (293)
T ss_dssp SGGGT
T ss_pred Ccccc
Confidence 98753
|
| >3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-49 Score=324.54 Aligned_cols=235 Identities=25% Similarity=0.364 Sum_probs=209.4
Q ss_pred CCCCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHH
Q 025672 5 FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTI 84 (249)
Q Consensus 5 ~~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 84 (249)
....++++|++|||||++|||++++++|+++|++|++++|+.++++++.+++...+.++.++.+|++|+++++++++++.
T Consensus 17 ~~~~m~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 96 (279)
T 3sju_A 17 RGSHMSRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAV 96 (279)
T ss_dssp --------CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CcccccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHH
Confidence 34455789999999999999999999999999999999999999999999998888899999999999999999999999
Q ss_pred HHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHH--HHHhcCCCCCCCCCCceEEEecccccccc
Q 025672 85 NHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALK--YLKKGGRGQASSSSGGIIINISATLHYTA 162 (249)
Q Consensus 85 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~--~~~~~~~~~~~~~~~g~iv~iss~~~~~~ 162 (249)
+.++++|+||||||.....++.+.+.++|++.+++|+.++++++++++| .|.+++. |+||++||..+..+
T Consensus 97 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~--------g~iV~isS~~~~~~ 168 (279)
T 3sju_A 97 ERFGPIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGW--------GRIVNIASTGGKQG 168 (279)
T ss_dssp HHHCSCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTC--------EEEEEECCGGGTSC
T ss_pred HHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCC--------cEEEEECChhhccC
Confidence 9999999999999998888888999999999999999999999999999 4766543 89999999999999
Q ss_pred CccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCC---------CChHHHHHhhhhhhcccCCCCH
Q 025672 163 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK---------LAPEEIRSKATDYMAAYKFGEK 233 (249)
Q Consensus 163 ~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~ 233 (249)
.++...|++||+|+.+|+++++.|++ ++||+||+|+||+|+|++.... ...++..+.+....|++|+++|
T Consensus 169 ~~~~~~Y~asKaa~~~l~~~la~e~~-~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p 247 (279)
T 3sju_A 169 VMYAAPYTASKHGVVGFTKSVGFELA-KTGITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNAKIPLGRYSTP 247 (279)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHHHTG-GGTEEEEEEEESSBCSHHHHHHHHSCCSSSCCCHHHHHHHHHTTCTTSSCBCH
T ss_pred CCCChhHHHHHHHHHHHHHHHHHHHH-hhCcEEEEEeeCcccchHHHHHHhhhhhcccCChHHHHHHHHhcCCCCCCCCH
Confidence 99999999999999999999999998 8899999999999998754321 1345667778888999999999
Q ss_pred HHHHHHHHHhccCCC
Q 025672 234 WDIAMAALYLASDAG 248 (249)
Q Consensus 234 ~dva~~v~~l~s~~a 248 (249)
||+|++++||+|+++
T Consensus 248 edvA~~v~~L~s~~a 262 (279)
T 3sju_A 248 EEVAGLVGYLVTDAA 262 (279)
T ss_dssp HHHHHHHHHHTSSGG
T ss_pred HHHHHHHHHHhCccc
Confidence 999999999999875
|
| >3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-48 Score=321.37 Aligned_cols=235 Identities=28% Similarity=0.421 Sum_probs=210.3
Q ss_pred CCCCCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCC-cchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHH
Q 025672 4 PFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR-KTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVES 82 (249)
Q Consensus 4 ~~~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~-~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~ 82 (249)
++.+.++++|++|||||++|||++++++|+++|++|++++++ .+.++++.+++...+.++.++++|++|++++++++++
T Consensus 10 ~~~~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~ 89 (270)
T 3is3_A 10 TYIPGRLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQ 89 (270)
T ss_dssp -CCTTCCTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHH
T ss_pred ccCCCCcCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHH
Confidence 345567899999999999999999999999999999997765 5567888888888888999999999999999999999
Q ss_pred HHHHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccc-ccc
Q 025672 83 TINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL-HYT 161 (249)
Q Consensus 83 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~-~~~ 161 (249)
+.+.++++|++|||||.....++.+.+.++|++.+++|+.++++++++++|.|.+ +|+||++||.. +..
T Consensus 90 ~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~----------~g~iv~isS~~~~~~ 159 (270)
T 3is3_A 90 AVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTE----------GGRIVLTSSNTSKDF 159 (270)
T ss_dssp HHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCT----------TCEEEEECCTTTTTC
T ss_pred HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc----------CCeEEEEeCchhccC
Confidence 9999999999999999988888889999999999999999999999999999965 28899999987 566
Q ss_pred cCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccC----------CCChHHHHHhhhhhhcccCCC
Q 025672 162 ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVS----------KLAPEEIRSKATDYMAAYKFG 231 (249)
Q Consensus 162 ~~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~----------~~~~~~~~~~~~~~~~~~~~~ 231 (249)
+.++...|++||+|+.+|+++++.|++ ++||+||+|+||+++|++... ....++..+......|++|++
T Consensus 160 ~~~~~~~Y~asKaa~~~~~~~la~e~~-~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~ 238 (270)
T 3is3_A 160 SVPKHSLYSGSKGAVDSFVRIFSKDCG-DKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASPLHRNG 238 (270)
T ss_dssp CCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECSBCSTTHHHHGGGGSTTGGGSCHHHHHHHHHHHSTTCSCB
T ss_pred CCCCCchhHHHHHHHHHHHHHHHHHhc-ccCeEEEEEEeCCccChhhhhhhhhccccccccchHHHHHHHHhcCCCCCCC
Confidence 788899999999999999999999998 899999999999999876532 234456666777888999999
Q ss_pred CHHHHHHHHHHhccCCCC
Q 025672 232 EKWDIAMAALYLASDAGQ 249 (249)
Q Consensus 232 ~~~dva~~v~~l~s~~a~ 249 (249)
+|+|+|++++||+|++++
T Consensus 239 ~p~dvA~~v~~L~s~~~~ 256 (270)
T 3is3_A 239 WPQDVANVVGFLVSKEGE 256 (270)
T ss_dssp CHHHHHHHHHHHTSGGGT
T ss_pred CHHHHHHHHHHHcCCccC
Confidence 999999999999998753
|
| >3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.9e-49 Score=321.94 Aligned_cols=229 Identities=30% Similarity=0.391 Sum_probs=211.2
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhC
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 88 (249)
.+++|++|||||++|||+++|++|+++|++|++++|+.+.++++.+++...+.++.++.+|++|+++++++++++.+.++
T Consensus 25 ~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 104 (270)
T 3ftp_A 25 TLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKEFG 104 (270)
T ss_dssp TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHHcC
Confidence 47899999999999999999999999999999999999999999999987788899999999999999999999999999
Q ss_pred CccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchh
Q 025672 89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH 168 (249)
Q Consensus 89 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~ 168 (249)
++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|.+++. |+||++||..+..+.++...
T Consensus 105 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~--------g~iv~isS~~~~~~~~~~~~ 176 (270)
T 3ftp_A 105 ALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARG--------GRIVNITSVVGSAGNPGQVN 176 (270)
T ss_dssp CCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--------EEEEEECCHHHHHCCTTBHH
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCC--------CEEEEECchhhCCCCCCchh
Confidence 9999999999988888889999999999999999999999999999987653 99999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhccCCC
Q 025672 169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAG 248 (249)
Q Consensus 169 y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~a 248 (249)
|++||+|+.+|+++++.|++ ++||+||+|+||+|+|++... . .++....+....|++|+++|||+|++++||+|+++
T Consensus 177 Y~asKaa~~~l~~~la~e~~-~~gI~vn~v~PG~v~T~~~~~-~-~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~ 253 (270)
T 3ftp_A 177 YAAAKAGVAGMTRALAREIG-SRGITVNCVAPGFIDTDMTKG-L-PQEQQTALKTQIPLGRLGSPEDIAHAVAFLASPQA 253 (270)
T ss_dssp HHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCSHHHHH-S-CHHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHHHHHHHHHHHHHHHHHh-hhCeEEEEEEeCCCcCcchhh-c-CHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCCCc
Confidence 99999999999999999998 889999999999999875433 2 23445566778899999999999999999999875
|
| >3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-48 Score=323.35 Aligned_cols=232 Identities=28% Similarity=0.410 Sum_probs=211.4
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCC---CeeEEEccCCCHHHHHHHHHHHH
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGI---PAIGLEGDVRKREDAVRVVESTI 84 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~---~~~~~~~Dl~~~~~~~~~~~~~~ 84 (249)
+++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++...+. ++.++.+|++|+++++++++++.
T Consensus 7 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 86 (281)
T 3svt_A 7 LSFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVT 86 (281)
T ss_dssp -CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred cCcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHH
Confidence 468899999999999999999999999999999999999999999999987655 78999999999999999999999
Q ss_pred HHhCCccEEEEcCCC-CCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC
Q 025672 85 NHFGKLDILVNAAAG-NFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT 163 (249)
Q Consensus 85 ~~~~~id~vi~~ag~-~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~ 163 (249)
+.++++|++|||||. ....++.+.+.++|++.+++|+.++++++++++|.|.+++ +|+||++||..+..+.
T Consensus 87 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~--------~g~iv~isS~~~~~~~ 158 (281)
T 3svt_A 87 AWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGG--------GGSFVGISSIAASNTH 158 (281)
T ss_dssp HHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT--------CEEEEEECCHHHHSCC
T ss_pred HHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC--------CcEEEEEeCHHHcCCC
Confidence 999999999999997 4456788899999999999999999999999999998765 3899999999999999
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHh
Q 025672 164 WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYL 243 (249)
Q Consensus 164 ~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l 243 (249)
++...|++||+++++|+++++.|++ ++||+||+|+||+|+|++.......++..+.+....|++|+++|+|+|++++||
T Consensus 159 ~~~~~Y~asK~a~~~l~~~la~e~~-~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~~~~l 237 (281)
T 3svt_A 159 RWFGAYGVTKSAVDHLMQLAADELG-ASWVRVNSIRPGLIRTDLVAAITESAELSSDYAMCTPLPRQGEVEDVANMAMFL 237 (281)
T ss_dssp TTCTHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCSGGGHHHHTCHHHHHHHHHHCSSSSCBCHHHHHHHHHHH
T ss_pred CCChhHHHHHHHHHHHHHHHHHHhh-hcCeEEEEEEeCcCcCcchhhcccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHH
Confidence 9999999999999999999999998 889999999999999887654333455666777888999999999999999999
Q ss_pred ccCCC
Q 025672 244 ASDAG 248 (249)
Q Consensus 244 ~s~~a 248 (249)
+|+++
T Consensus 238 ~s~~~ 242 (281)
T 3svt_A 238 LSDAA 242 (281)
T ss_dssp HSGGG
T ss_pred hCccc
Confidence 99865
|
| >4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-48 Score=319.47 Aligned_cols=234 Identities=28% Similarity=0.423 Sum_probs=208.8
Q ss_pred CCCCCCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHH
Q 025672 3 SPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVES 82 (249)
Q Consensus 3 ~~~~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~ 82 (249)
..+..+++++|++|||||++|||++++++|+++|++|++++|+.+.++++.+++ +.++.++++|++|++++++++++
T Consensus 18 ~~~~~~~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~ 94 (277)
T 4dqx_A 18 LYFQSMDLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEI---GSKAFGVRVDVSSAKDAESMVEK 94 (277)
T ss_dssp ----CCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHH
T ss_pred cccccCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCceEEEEecCCCHHHHHHHHHH
Confidence 346677899999999999999999999999999999999999998888877765 56799999999999999999999
Q ss_pred HHHHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc
Q 025672 83 TINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 162 (249)
Q Consensus 83 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~ 162 (249)
+.+.++++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|.+++ +|+||++||..+..+
T Consensus 95 ~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~--------~g~iv~isS~~~~~~ 166 (277)
T 4dqx_A 95 TTAKWGRVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNG--------GGSIINTTSYTATSA 166 (277)
T ss_dssp HHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTT--------CEEEEEECCGGGTSC
T ss_pred HHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC--------CcEEEEECchhhCcC
Confidence 999999999999999998888889999999999999999999999999999998765 389999999999999
Q ss_pred CccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccC----CCChHHHHHhhhhhhcccCCCCHHHHHH
Q 025672 163 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVS----KLAPEEIRSKATDYMAAYKFGEKWDIAM 238 (249)
Q Consensus 163 ~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~dva~ 238 (249)
.++...|++||+|+.+|+++++.|++ ++||+||+|+||+|+|++... ..........+....|.+|+++|+|+|+
T Consensus 167 ~~~~~~Y~asKaa~~~l~~~la~e~~-~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~ 245 (277)
T 4dqx_A 167 IADRTAYVASKGAISSLTRAMAMDHA-KEGIRVNAVAPGTIDSPYFTKIFAEAKDPAKLRSDFNARAVMDRMGTAEEIAE 245 (277)
T ss_dssp CTTBHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCCHHHHHHHHTCSCHHHHHHHHHTTSTTCSCBCHHHHHH
T ss_pred CCCChhHHHHHHHHHHHHHHHHHHhh-hcCeEEEEEeeCcCcCchhhhhcccccchhHHHHHHHhcCcccCCcCHHHHHH
Confidence 99999999999999999999999998 889999999999999876322 1223344445777789999999999999
Q ss_pred HHHHhccCCC
Q 025672 239 AALYLASDAG 248 (249)
Q Consensus 239 ~v~~l~s~~a 248 (249)
+++||+|+++
T Consensus 246 ~v~~L~s~~~ 255 (277)
T 4dqx_A 246 AMLFLASDRS 255 (277)
T ss_dssp HHHHHHSGGG
T ss_pred HHHHHhCCcc
Confidence 9999999875
|
| >3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-48 Score=320.08 Aligned_cols=231 Identities=27% Similarity=0.329 Sum_probs=198.6
Q ss_pred CCCCCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHH
Q 025672 4 PFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVEST 83 (249)
Q Consensus 4 ~~~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 83 (249)
|.+.+++++|++|||||++|||+++|++|+++|++|++++|+.++++++.+++ +.++.++++|++|+++++++++++
T Consensus 19 ~~~m~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~ 95 (266)
T 3grp_A 19 PGSMFKLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADL---GKDVFVFSANLSDRKSIKQLAEVA 95 (266)
T ss_dssp --CTTCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CSSEEEEECCTTSHHHHHHHHHHH
T ss_pred CcchhccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCceEEEEeecCCHHHHHHHHHHH
Confidence 44556789999999999999999999999999999999999998888776655 568999999999999999999999
Q ss_pred HHHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC
Q 025672 84 INHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT 163 (249)
Q Consensus 84 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~ 163 (249)
.+.++++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|.+++. |+||++||..+..+.
T Consensus 96 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~--------g~Iv~isS~~~~~~~ 167 (266)
T 3grp_A 96 EREMEGIDILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRRY--------GRIINITSIVGVVGN 167 (266)
T ss_dssp HHHHTSCCEEEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--------EEEEEECCC------
T ss_pred HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC--------cEEEEECCHHHcCCC
Confidence 999999999999999988788888999999999999999999999999999987653 899999999999999
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHh
Q 025672 164 WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYL 243 (249)
Q Consensus 164 ~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l 243 (249)
++...|++||+|+.+|+++++.|++ ++||+||+|+||+|+|++... . .++..+.+....|++|+++|||+|++++||
T Consensus 168 ~~~~~Y~asKaa~~~~~~~la~e~~-~~gI~vn~v~PG~v~t~~~~~-~-~~~~~~~~~~~~p~~r~~~~edvA~~v~~L 244 (266)
T 3grp_A 168 PGQTNYCAAKAGLIGFSKALAQEIA-SRNITVNCIAPGFIKSAMTDK-L-NEKQKEAIMAMIPMKRMGIGEEIAFATVYL 244 (266)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCSHHHHT-C-CHHHHHHHHTTCTTCSCBCHHHHHHHHHHH
T ss_pred CCchhHHHHHHHHHHHHHHHHHHhh-hhCcEEEEEeeCcCCCchhhc-c-CHHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence 9999999999999999999999998 889999999999999876433 2 345556677889999999999999999999
Q ss_pred ccCCC
Q 025672 244 ASDAG 248 (249)
Q Consensus 244 ~s~~a 248 (249)
+|+++
T Consensus 245 ~s~~~ 249 (266)
T 3grp_A 245 ASDEA 249 (266)
T ss_dssp HSGGG
T ss_pred hCccc
Confidence 99875
|
| >3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-48 Score=314.52 Aligned_cols=228 Identities=28% Similarity=0.379 Sum_probs=208.7
Q ss_pred CCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeC-CcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhC
Q 025672 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGR-RKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (249)
Q Consensus 10 l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r-~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 88 (249)
+.+|++|||||++|||++++++|+++|++|+++++ +.+.++++.+++...+.++.++++|++|+++++++++++.+.++
T Consensus 2 l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 81 (246)
T 3osu_A 2 KMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFG 81 (246)
T ss_dssp CCSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 46899999999999999999999999999999887 45678888888888888999999999999999999999999999
Q ss_pred CccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchh
Q 025672 89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH 168 (249)
Q Consensus 89 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~ 168 (249)
++|++|||||.....++.+.+.++|++.+++|+.++++++++++|.|.+++. |+||++||..+..+.++...
T Consensus 82 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~--------g~iv~isS~~~~~~~~~~~~ 153 (246)
T 3osu_A 82 SLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRS--------GAIINLSSVVGAVGNPGQAN 153 (246)
T ss_dssp CCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--------EEEEEECCHHHHHCCTTCHH
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCC--------CEEEEEcchhhcCCCCCChH
Confidence 9999999999988888889999999999999999999999999999987653 89999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhccCCC
Q 025672 169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAG 248 (249)
Q Consensus 169 y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~a 248 (249)
|++||+|+++|+++++.|++ ++||+||+|+||+++|++.. .. .++..+.+....|++|+++|+|+|++++||+++++
T Consensus 154 Y~~sK~a~~~~~~~la~e~~-~~gi~vn~v~PG~v~t~~~~-~~-~~~~~~~~~~~~p~~r~~~~~dva~~v~~l~s~~~ 230 (246)
T 3osu_A 154 YVATKAGVIGLTKSAARELA-SRGITVNAVAPGFIVSDMTD-AL-SDELKEQMLTQIPLARFGQDTDIANTVAFLASDKA 230 (246)
T ss_dssp HHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBGGGCCS-CS-CHHHHHHHHTTCTTCSCBCHHHHHHHHHHHTSGGG
T ss_pred HHHHHHHHHHHHHHHHHHhc-ccCeEEEEEEECCCcCCccc-cc-CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccc
Confidence 99999999999999999998 88999999999999987643 33 34556667788899999999999999999999875
|
| >3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-48 Score=320.80 Aligned_cols=232 Identities=25% Similarity=0.346 Sum_probs=209.8
Q ss_pred CCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHH
Q 025672 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (249)
Q Consensus 7 ~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 86 (249)
.+++++|++|||||++|||++++++|+++|++|++++|+.+.++++.+++...+.++.++++|++|+++++++++++.+.
T Consensus 27 ~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~ 106 (276)
T 3r1i_A 27 LFDLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGE 106 (276)
T ss_dssp GGCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 45689999999999999999999999999999999999999999999999888889999999999999999999999999
Q ss_pred hCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC--c
Q 025672 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT--W 164 (249)
Q Consensus 87 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~--~ 164 (249)
++++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|.++.. +|+||++||..+..+. +
T Consensus 107 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~-------~g~iv~isS~~~~~~~~~~ 179 (276)
T 3r1i_A 107 LGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGL-------GGTIITTASMSGHIINIPQ 179 (276)
T ss_dssp HSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTS-------CEEEEEECCGGGTSCCCSS
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC-------CcEEEEECchHhcccCCCC
Confidence 999999999999988888889999999999999999999999999999987643 4889999999887654 3
Q ss_pred cchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhc
Q 025672 165 YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLA 244 (249)
Q Consensus 165 ~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~ 244 (249)
+...|++||+|+.+|+++++.|++ ++||+||+|+||+|+|++.... .+..+.+....|++|+++|+|+|++++||+
T Consensus 180 ~~~~Y~asKaa~~~l~~~la~e~~-~~gIrvn~v~PG~v~T~~~~~~---~~~~~~~~~~~p~~r~~~pedvA~~v~fL~ 255 (276)
T 3r1i_A 180 QVSHYCTSKAAVVHLTKAMAVELA-PHQIRVNSVSPGYIRTELVEPL---ADYHALWEPKIPLGRMGRPEELTGLYLYLA 255 (276)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECCBCSTTTGGG---GGGHHHHGGGSTTSSCBCGGGSHHHHHHHH
T ss_pred CcchHHHHHHHHHHHHHHHHHHHh-hcCcEEEEEeeCCCcCCccccc---hHHHHHHHhcCCCCCCcCHHHHHHHHHHHc
Confidence 578899999999999999999998 8899999999999998765432 223455667789999999999999999999
Q ss_pred cCCCC
Q 025672 245 SDAGQ 249 (249)
Q Consensus 245 s~~a~ 249 (249)
|++++
T Consensus 256 s~~~~ 260 (276)
T 3r1i_A 256 SAASS 260 (276)
T ss_dssp SGGGT
T ss_pred Ccccc
Confidence 98753
|
| >4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-49 Score=323.39 Aligned_cols=235 Identities=42% Similarity=0.654 Sum_probs=211.6
Q ss_pred CCCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHh-cCCCeeEEEccCCCHHHHHHHHHHHH
Q 025672 6 KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHS-LGIPAIGLEGDVRKREDAVRVVESTI 84 (249)
Q Consensus 6 ~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~ 84 (249)
....+++|++|||||++|||++++++|+++|++|++++|+.+++++..+++.. .+.++.++++|++|+++++++++++.
T Consensus 21 ~~~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 100 (277)
T 4fc7_A 21 CPDLLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQAL 100 (277)
T ss_dssp CTTTTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CccccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence 34558999999999999999999999999999999999999988888888753 46789999999999999999999999
Q ss_pred HHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCc
Q 025672 85 NHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW 164 (249)
Q Consensus 85 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~ 164 (249)
+.++++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|.+++ +|+||++||..+..+.+
T Consensus 101 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~ 172 (277)
T 4fc7_A 101 KEFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDH--------GGVIVNITATLGNRGQA 172 (277)
T ss_dssp HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHH--------CEEEEEECCSHHHHTCT
T ss_pred HHcCCCCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC--------CCEEEEECchhhCCCCC
Confidence 9999999999999988778888999999999999999999999999999987654 38999999999999999
Q ss_pred cchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCC-ChHHHHHhhhhhhcccCCCCHHHHHHHHHHh
Q 025672 165 YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL-APEEIRSKATDYMAAYKFGEKWDIAMAALYL 243 (249)
Q Consensus 165 ~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l 243 (249)
+...|++||+|+.+|+++++.|++ ++||+||+|+||+|+|++..... ..+...+......|++|+++|+|+|++++||
T Consensus 173 ~~~~Y~asKaa~~~l~~~la~e~~-~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~fL 251 (277)
T 4fc7_A 173 LQVHAGSAKAAVDAMTRHLAVEWG-PQNIRVNSLAPGPISGTEGLRRLGGPQASLSTKVTASPLQRLGNKTEIAHSVLYL 251 (277)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECCBSSSHHHHHHSCCHHHHHHHHHTSTTSSCBCHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHHHHHHhh-hcCeEEEEEEECCEecchhhhhccCCHHHHHHHhccCCCCCCcCHHHHHHHHHHH
Confidence 999999999999999999999998 88999999999999987543322 2344556677788999999999999999999
Q ss_pred ccCCCC
Q 025672 244 ASDAGQ 249 (249)
Q Consensus 244 ~s~~a~ 249 (249)
+|++++
T Consensus 252 ~s~~~~ 257 (277)
T 4fc7_A 252 ASPLAS 257 (277)
T ss_dssp HSGGGT
T ss_pred cCCccC
Confidence 998753
|
| >3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-48 Score=321.90 Aligned_cols=232 Identities=23% Similarity=0.308 Sum_probs=202.2
Q ss_pred CCCCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHH
Q 025672 5 FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTI 84 (249)
Q Consensus 5 ~~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 84 (249)
|..+++++|++|||||++|||++++++|+++|++|++++|+.+.++++.+++ +.++.++++|++|+++++++++++.
T Consensus 22 m~~~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~ 98 (277)
T 3gvc_A 22 MNHPDLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKI---GCGAAACRVDVSDEQQIIAMVDACV 98 (277)
T ss_dssp -----CTTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH---CSSCEEEECCTTCHHHHHHHHHHHH
T ss_pred CCccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---CCcceEEEecCCCHHHHHHHHHHHH
Confidence 4556789999999999999999999999999999999999998888887776 5678999999999999999999999
Q ss_pred HHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCc
Q 025672 85 NHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW 164 (249)
Q Consensus 85 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~ 164 (249)
+.++++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|.+++. |+||++||..+..+.+
T Consensus 99 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~--------g~Iv~isS~~~~~~~~ 170 (277)
T 3gvc_A 99 AAFGGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGG--------GAIVNLSSLAGQVAVG 170 (277)
T ss_dssp HHHSSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC--------EEEEEECCGGGTSCCT
T ss_pred HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC--------cEEEEEcchhhccCCC
Confidence 99999999999999988888899999999999999999999999999999987653 9999999999999999
Q ss_pred cchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCC--hHHHHHhhhh---hhcccCCCCHHHHHHH
Q 025672 165 YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA--PEEIRSKATD---YMAAYKFGEKWDIAMA 239 (249)
Q Consensus 165 ~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~--~~~~~~~~~~---~~~~~~~~~~~dva~~ 239 (249)
+...|++||+|+.+|+++++.|++ ++||+||+|+||+|+|++...... +......... ..|.+|+++|||+|++
T Consensus 171 ~~~~Y~asKaa~~~l~~~la~e~~-~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~ 249 (277)
T 3gvc_A 171 GTGAYGMSKAGIIQLSRITAAELR-SSGIRSNTLLPAFVDTPMQQTAMAMFDGALGAGGARSMIARLQGRMAAPEEMAGI 249 (277)
T ss_dssp TBHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCCHHHHHHHTCC------CCHHHHHHHHHSSCBCHHHHHHH
T ss_pred CchhHHHHHHHHHHHHHHHHHHhc-ccCeEEEEEeeCCccCchHHHhhhcchhhHHHHhhhhhhhccccCCCCHHHHHHH
Confidence 999999999999999999999998 899999999999999875432111 1122222222 5678999999999999
Q ss_pred HHHhccCCC
Q 025672 240 ALYLASDAG 248 (249)
Q Consensus 240 v~~l~s~~a 248 (249)
++||+|+++
T Consensus 250 v~~L~s~~a 258 (277)
T 3gvc_A 250 VVFLLSDDA 258 (277)
T ss_dssp HHHHHSGGG
T ss_pred HHHHcCCcc
Confidence 999999875
|
| >3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-47 Score=317.16 Aligned_cols=235 Identities=26% Similarity=0.339 Sum_probs=203.5
Q ss_pred CCCCCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCC------------cchHHHHHHHHHhcCCCeeEEEccCC
Q 025672 4 PFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR------------KTVLRSAVAALHSLGIPAIGLEGDVR 71 (249)
Q Consensus 4 ~~~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~------------~~~~~~~~~~~~~~~~~~~~~~~Dl~ 71 (249)
|.+.+++++|++|||||++|||++++++|+++|++|++++|+ .+.+++..+++...+.++.++++|++
T Consensus 2 p~~m~~l~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~ 81 (281)
T 3s55_A 2 PGSMADFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVK 81 (281)
T ss_dssp ----CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred CCcccccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCC
Confidence 556677999999999999999999999999999999999997 55667777777777889999999999
Q ss_pred CHHHHHHHHHHHHHHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceE
Q 025672 72 KREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGII 151 (249)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~i 151 (249)
|+++++++++++.+.++++|++|||||+....++.+.+.++|++.+++|+.++++++++++|.|.+++. |+|
T Consensus 82 ~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~--------g~i 153 (281)
T 3s55_A 82 DRAALESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNY--------GRI 153 (281)
T ss_dssp CHHHHHHHHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--------EEE
T ss_pred CHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCC--------CEE
Confidence 999999999999999999999999999988888899999999999999999999999999999987653 899
Q ss_pred EEeccccccccCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCC-----C-------ChHHHHH
Q 025672 152 INISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK-----L-------APEEIRS 219 (249)
Q Consensus 152 v~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~-----~-------~~~~~~~ 219 (249)
|++||..+..+.++...|++||+|+.+|+++++.|++ ++||+||+|+||+|+|++.... . ..++..+
T Consensus 154 v~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~-~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (281)
T 3s55_A 154 VTVSSMLGHSANFAQASYVSSKWGVIGLTKCAAHDLV-GYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLKDVES 232 (281)
T ss_dssp EEECCGGGGSCCTTCHHHHHHHHHHHHHHHHHHHHTG-GGTEEEEEEEECSBCSTTTSSHHHHHC-------CCHHHHHH
T ss_pred EEECChhhcCCCCCCchhHHHHHHHHHHHHHHHHHHh-hcCcEEEEEecCcccCccccchhhhccccccccccchhHHHH
Confidence 9999999999999999999999999999999999998 8999999999999998865421 1 1111111
Q ss_pred h--hhhhhcccCCCCHHHHHHHHHHhccCCC
Q 025672 220 K--ATDYMAAYKFGEKWDIAMAALYLASDAG 248 (249)
Q Consensus 220 ~--~~~~~~~~~~~~~~dva~~v~~l~s~~a 248 (249)
. .....+ +|+.+|+|+|++++||+|+++
T Consensus 233 ~~~~~~~~~-~~~~~p~dvA~~v~~L~s~~~ 262 (281)
T 3s55_A 233 VFASLHLQY-APFLKPEEVTRAVLFLVDEAS 262 (281)
T ss_dssp HHHHHCSSS-CSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHhhhccC-cCCCCHHHHHHHHHHHcCCcc
Confidence 1 122233 789999999999999999875
|
| >3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-48 Score=318.76 Aligned_cols=231 Identities=28% Similarity=0.384 Sum_probs=208.4
Q ss_pred CCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHH
Q 025672 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (249)
Q Consensus 7 ~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 86 (249)
.+++++|++|||||++|||+++|++|+++|++|++++|+ +.+++..+++...+.++.++.+|++|+++++++.+ ..+.
T Consensus 26 ~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~-~~~~ 103 (273)
T 3uf0_A 26 PFSLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRT-DGVKEVADEIADGGGSAEAVVADLADLEGAANVAE-ELAA 103 (273)
T ss_dssp TTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS-THHHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHH-HHHH
T ss_pred ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCH-HHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHH-HHHh
Confidence 456899999999999999999999999999999999965 56778888887778889999999999999999954 4566
Q ss_pred hCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccc
Q 025672 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ 166 (249)
Q Consensus 87 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~ 166 (249)
++++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|.+++. |+||++||..+..+.++.
T Consensus 104 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~--------g~IV~isS~~~~~~~~~~ 175 (273)
T 3uf0_A 104 TRRVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGS--------GRIVTIASMLSFQGGRNV 175 (273)
T ss_dssp HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--------EEEEEECCGGGTSCCSSC
T ss_pred cCCCcEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC--------CEEEEEcchHhcCCCCCC
Confidence 799999999999988888889999999999999999999999999999987754 899999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhccC
Q 025672 167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246 (249)
Q Consensus 167 ~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~ 246 (249)
..|++||+|+.+|+++++.|++ ++||+||+|+||+|+|++.......++..+.+....|.+|+++|+|+|++++||+++
T Consensus 176 ~~Y~asKaa~~~l~~~la~e~~-~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~v~~L~s~ 254 (273)
T 3uf0_A 176 AAYAASKHAVVGLTRALASEWA-GRGVGVNALAPGYVVTANTAALRADDERAAEITARIPAGRWATPEDMVGPAVFLASD 254 (273)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCSGGGHHHHTSHHHHHHHHHHSTTSSCBCGGGGHHHHHHHHSG
T ss_pred hhHHHHHHHHHHHHHHHHHHHh-hcCcEEEEEEeCCCcCCchhhcccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCc
Confidence 9999999999999999999998 889999999999999886654444455666777889999999999999999999998
Q ss_pred CC
Q 025672 247 AG 248 (249)
Q Consensus 247 ~a 248 (249)
++
T Consensus 255 ~a 256 (273)
T 3uf0_A 255 AA 256 (273)
T ss_dssp GG
T ss_pred hh
Confidence 65
|
| >3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-47 Score=318.54 Aligned_cols=233 Identities=26% Similarity=0.351 Sum_probs=204.2
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCC----------------cchHHHHHHHHHhcCCCeeEEEccCC
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR----------------KTVLRSAVAALHSLGIPAIGLEGDVR 71 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~----------------~~~~~~~~~~~~~~~~~~~~~~~Dl~ 71 (249)
..+++|++|||||++|||++++++|+++|++|++++|+ .+.++++.+++...+.++.++++|++
T Consensus 7 ~~l~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~ 86 (286)
T 3uve_A 7 GRVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVR 86 (286)
T ss_dssp CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTT
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCC
Confidence 35889999999999999999999999999999999987 66677788888777889999999999
Q ss_pred CHHHHHHHHHHHHHHhCCccEEEEcCCCCCCC-CCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCce
Q 025672 72 KREDAVRVVESTINHFGKLDILVNAAAGNFLV-PAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGI 150 (249)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~-~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ 150 (249)
|+++++++++++.+.++++|+||||||+.... ++.+.+.++|++.+++|+.++++++++++|.|.+++. +|+
T Consensus 87 ~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~-------~g~ 159 (286)
T 3uve_A 87 DYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGR-------GGS 159 (286)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTS-------CEE
T ss_pred CHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCC-------CcE
Confidence 99999999999999999999999999987655 4788899999999999999999999999999987542 389
Q ss_pred EEEeccccccccCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCC------------CChHHHH
Q 025672 151 IINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK------------LAPEEIR 218 (249)
Q Consensus 151 iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~------------~~~~~~~ 218 (249)
||++||..+..+.++...|++||+|+.+|+++++.|++ ++||+||+|+||+|+|++.... ..+++..
T Consensus 160 iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~-~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (286)
T 3uve_A 160 IILTSSVGGLKAYPHTGHYVAAKHGVVGLMRAFGVELG-QHMIRVNSVHPTHVKTPMLHNEGTFKMFRPDLENPGPDDMA 238 (286)
T ss_dssp EEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCCHHHHH
T ss_pred EEEECchhhccCCCCccHHHHHHHHHHHHHHHHHHHhc-ccCeEEEEEecCcccCCcccccchhhhccccccccchhhHH
Confidence 99999999999999999999999999999999999998 8999999999999998865421 1122222
Q ss_pred H--hhhhhhcccCCCCHHHHHHHHHHhccCCCC
Q 025672 219 S--KATDYMAAYKFGEKWDIAMAALYLASDAGQ 249 (249)
Q Consensus 219 ~--~~~~~~~~~~~~~~~dva~~v~~l~s~~a~ 249 (249)
. ......| +|+++|+|+|++++||+|++++
T Consensus 239 ~~~~~~~~~p-~r~~~p~dvA~~v~fL~s~~a~ 270 (286)
T 3uve_A 239 PICQMFHTLP-IPWVEPIDISNAVLFFASDEAR 270 (286)
T ss_dssp HHHHTTCSSS-CSCBCHHHHHHHHHHHHSGGGT
T ss_pred HHHHhhhccC-CCcCCHHHHHHHHHHHcCcccc
Confidence 1 2344566 8999999999999999998763
|
| >3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-48 Score=319.86 Aligned_cols=233 Identities=28% Similarity=0.371 Sum_probs=200.2
Q ss_pred CCCCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEE-eCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHH
Q 025672 5 FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIM-GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVEST 83 (249)
Q Consensus 5 ~~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~-~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 83 (249)
+..|++++|++|||||++|||+++|++|+++|++|+++ .|+.+.++++.+++...+.++.++++|++|+++++++++++
T Consensus 20 ~~~m~~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~ 99 (267)
T 3u5t_A 20 FQSMMETNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATA 99 (267)
T ss_dssp -------CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred ccccccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHH
Confidence 45567889999999999999999999999999999987 55666778888888888889999999999999999999999
Q ss_pred HHHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC
Q 025672 84 INHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT 163 (249)
Q Consensus 84 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~ 163 (249)
.+.++++|++|||||+....++.+.+.++|++.+++|+.++++++++++|.|.+. |+||++||..+..+.
T Consensus 100 ~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~----------g~iv~isS~~~~~~~ 169 (267)
T 3u5t_A 100 EEAFGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVG----------GRIINMSTSQVGLLH 169 (267)
T ss_dssp HHHHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEE----------EEEEEECCTHHHHCC
T ss_pred HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC----------CeEEEEeChhhccCC
Confidence 9999999999999999888888899999999999999999999999999998652 889999999999999
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHh
Q 025672 164 WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYL 243 (249)
Q Consensus 164 ~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l 243 (249)
++...|++||+|+.+|+++++.|++ ++||+||+|+||+|+|++.... ..++..+.+....|++|+++|+|+|++++||
T Consensus 170 ~~~~~Y~asKaa~~~l~~~la~e~~-~~gI~vn~v~PG~v~T~~~~~~-~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L 247 (267)
T 3u5t_A 170 PSYGIYAAAKAGVEAMTHVLSKELR-GRDITVNAVAPGPTATDLFLEG-KSDEVRDRFAKLAPLERLGTPQDIAGAVAFL 247 (267)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHTT-TSCCEEEEEEECCBC------------CHHHHHTSSTTCSCBCHHHHHHHHHHH
T ss_pred CCchHHHHHHHHHHHHHHHHHHHhh-hhCCEEEEEEECCCcCcccccc-CCHHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence 9999999999999999999999998 8999999999999998765432 2334455677788999999999999999999
Q ss_pred ccCCCC
Q 025672 244 ASDAGQ 249 (249)
Q Consensus 244 ~s~~a~ 249 (249)
+|++++
T Consensus 248 ~s~~~~ 253 (267)
T 3u5t_A 248 AGPDGA 253 (267)
T ss_dssp HSTTTT
T ss_pred hCcccc
Confidence 998763
|
| >4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-48 Score=319.99 Aligned_cols=228 Identities=28% Similarity=0.378 Sum_probs=206.8
Q ss_pred CCCCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeC-CcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHH
Q 025672 5 FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGR-RKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVEST 83 (249)
Q Consensus 5 ~~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r-~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 83 (249)
|..+++++|++|||||++|||++++++|+++|++|++++| +.+.++++.+++...+.++.++++|++|+++++++++++
T Consensus 21 m~~~~l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~ 100 (269)
T 4dmm_A 21 MTALPLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAV 100 (269)
T ss_dssp ---CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHH
T ss_pred ccccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHH
Confidence 5567789999999999999999999999999999999988 566678888888887889999999999999999999999
Q ss_pred HHHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC
Q 025672 84 INHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT 163 (249)
Q Consensus 84 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~ 163 (249)
.+.++++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|.+++. |+||++||..+..+.
T Consensus 101 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~--------g~iv~isS~~~~~~~ 172 (269)
T 4dmm_A 101 IERWGRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRS--------GRIINIASVVGEMGN 172 (269)
T ss_dssp HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--------CEEEEECCHHHHHCC
T ss_pred HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCC--------cEEEEECchhhcCCC
Confidence 999999999999999988888888999999999999999999999999999987653 899999999999999
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHh
Q 025672 164 WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYL 243 (249)
Q Consensus 164 ~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l 243 (249)
++...|++||+|+.+|+++++.|++ ++||+||+|+||+|+|++... ...+.+....|++|+++|+|+|++++||
T Consensus 173 ~~~~~Y~asK~a~~~l~~~la~e~~-~~gi~vn~v~PG~v~T~~~~~-----~~~~~~~~~~p~~r~~~~~dvA~~v~~l 246 (269)
T 4dmm_A 173 PGQANYSAAKAGVIGLTKTVAKELA-SRGITVNAVAPGFIATDMTSE-----LAAEKLLEVIPLGRYGEAAEVAGVVRFL 246 (269)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECCBTTSCSCH-----HHHHHHGGGCTTSSCBCHHHHHHHHHHH
T ss_pred CCchhHHHHHHHHHHHHHHHHHHHh-hhCcEEEEEEECCCcCccccc-----ccHHHHHhcCCCCCCCCHHHHHHHHHHH
Confidence 9999999999999999999999998 889999999999999875422 2225566778999999999999999999
Q ss_pred ccC
Q 025672 244 ASD 246 (249)
Q Consensus 244 ~s~ 246 (249)
+++
T Consensus 247 ~s~ 249 (269)
T 4dmm_A 247 AAD 249 (269)
T ss_dssp HHC
T ss_pred hCC
Confidence 997
|
| >3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-48 Score=315.56 Aligned_cols=230 Identities=28% Similarity=0.387 Sum_probs=205.0
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
..+++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++ +.++.++++|++|+++++++++++.+.+
T Consensus 2 ~~l~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 78 (247)
T 3rwb_A 2 ERLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASI---GKKARAIAADISDPGSVKALFAEIQALT 78 (247)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH---CTTEEECCCCTTCHHHHHHHHHHHHHHH
T ss_pred CCcCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCceEEEEcCCCCHHHHHHHHHHHHHHC
Confidence 4588999999999999999999999999999999999998888887776 5689999999999999999999999999
Q ss_pred CCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch
Q 025672 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 167 (249)
Q Consensus 88 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~ 167 (249)
|++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|.+++. .|+||++||..+..+.++..
T Consensus 79 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~-------~g~iv~isS~~~~~~~~~~~ 151 (247)
T 3rwb_A 79 GGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGK-------AGRVISIASNTFFAGTPNMA 151 (247)
T ss_dssp SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC-------CEEEEEECCTHHHHTCTTCH
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCC-------CcEEEEECchhhccCCCCch
Confidence 99999999999988888889999999999999999999999999999987642 38999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhccCC
Q 025672 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247 (249)
Q Consensus 168 ~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~ 247 (249)
.|++||+|+.+|+++++.|++ ++||+||+|+||+|+|++.... ..+..........|++|+++|||+|+++.||+|++
T Consensus 152 ~Y~asKaa~~~~~~~la~e~~-~~gi~vn~v~PG~v~t~~~~~~-~~~~~~~~~~~~~~~~r~~~pedva~~v~~L~s~~ 229 (247)
T 3rwb_A 152 AYVAAKGGVIGFTRALATELG-KYNITANAVTPGLIESDGVKAS-PHNEAFGFVEMLQAMKGKGQPEHIADVVSFLASDD 229 (247)
T ss_dssp HHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCCHHHHTS-GGGGGHHHHHHHSSSCSCBCHHHHHHHHHHHHSGG
T ss_pred hhHHHHHHHHHHHHHHHHHhh-hcCeEEEEEeeCcCcCcccccc-ChhHHHHHHhcccccCCCcCHHHHHHHHHHHhCcc
Confidence 999999999999999999998 8999999999999998765432 22222222233378899999999999999999987
Q ss_pred CC
Q 025672 248 GQ 249 (249)
Q Consensus 248 a~ 249 (249)
++
T Consensus 230 ~~ 231 (247)
T 3rwb_A 230 AR 231 (247)
T ss_dssp GT
T ss_pred cc
Confidence 53
|
| >3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-47 Score=315.84 Aligned_cols=228 Identities=30% Similarity=0.422 Sum_probs=206.8
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
+++++|++|||||++|||++++++|+++|++|++++|+.+++++..+++ +.++.++.+|++|+++++++++++.+.+
T Consensus 7 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 83 (271)
T 3tzq_B 7 AELENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASV---GRGAVHHVVDLTNEVSVRALIDFTIDTF 83 (271)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHH---CTTCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh---CCCeEEEECCCCCHHHHHHHHHHHHHHc
Confidence 4688999999999999999999999999999999999999988888777 5678999999999999999999999999
Q ss_pred CCccEEEEcCCCCC--CCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCcc
Q 025672 88 GKLDILVNAAAGNF--LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY 165 (249)
Q Consensus 88 ~~id~vi~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~ 165 (249)
+++|++|||||... ..++.+.+.++|++.+++|+.++++++++++|.|.+++. |+||++||..+..+.++
T Consensus 84 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~--------g~iv~isS~~~~~~~~~ 155 (271)
T 3tzq_B 84 GRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAGG--------GAIVNISSATAHAAYDM 155 (271)
T ss_dssp SCCCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC--------EEEEEECCGGGTSBCSS
T ss_pred CCCCEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC--------CEEEEECCHHHcCCCCC
Confidence 99999999999873 456678899999999999999999999999999988653 89999999999999999
Q ss_pred chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhcc
Q 025672 166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245 (249)
Q Consensus 166 ~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s 245 (249)
...|++||+|+++|+++++.|++ ++||+||+|+||+|+|++..... ++...+.+....|.+|+++|+|+|++++||+|
T Consensus 156 ~~~Y~asKaa~~~l~~~la~e~~-~~gi~vn~v~PG~v~t~~~~~~~-~~~~~~~~~~~~~~~r~~~p~dvA~~v~~L~s 233 (271)
T 3tzq_B 156 STAYACTKAAIETLTRYVATQYG-RHGVRCNAIAPGLVRTPRLEVGL-PQPIVDIFATHHLAGRIGEPHEIAELVCFLAS 233 (271)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECCBCCTTTC----CHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHS
T ss_pred ChHHHHHHHHHHHHHHHHHHHHh-hcCEEEEEEEeCCCcCccccccC-CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC
Confidence 99999999999999999999998 88999999999999988655343 44566677788899999999999999999999
Q ss_pred CCC
Q 025672 246 DAG 248 (249)
Q Consensus 246 ~~a 248 (249)
+++
T Consensus 234 ~~~ 236 (271)
T 3tzq_B 234 DRA 236 (271)
T ss_dssp GGG
T ss_pred ccc
Confidence 875
|
| >4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-48 Score=317.48 Aligned_cols=225 Identities=23% Similarity=0.317 Sum_probs=203.6
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
..+++|++|||||++|||++++++|+++|++|++++|+.+.++++.+++ +.++.++++|++|+++++++++++.+.+
T Consensus 4 ~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 80 (255)
T 4eso_A 4 GNYQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEF---GPRVHALRSDIADLNEIAVLGAAAGQTL 80 (255)
T ss_dssp CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---GGGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCcceEEEccCCCHHHHHHHHHHHHHHh
Confidence 4588999999999999999999999999999999999998888887776 4578999999999999999999999999
Q ss_pred CCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch
Q 025672 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 167 (249)
Q Consensus 88 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~ 167 (249)
+++|++|||||.....++.+.+.++|++.+++|+.++++++++++|.|.+. |+||++||..+..+.++..
T Consensus 81 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~----------g~iv~isS~~~~~~~~~~~ 150 (255)
T 4eso_A 81 GAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREG----------GSIVFTSSVADEGGHPGMS 150 (255)
T ss_dssp SSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEE----------EEEEEECCGGGSSBCTTBH
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcC----------CEEEEECChhhcCCCCCch
Confidence 999999999999888888899999999999999999999999999988652 8899999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCC-CCh---HHHHHhhhhhhcccCCCCHHHHHHHHHHh
Q 025672 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK-LAP---EEIRSKATDYMAAYKFGEKWDIAMAALYL 243 (249)
Q Consensus 168 ~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~-~~~---~~~~~~~~~~~~~~~~~~~~dva~~v~~l 243 (249)
.|++||+|+.+|+++++.|++ ++||+||+|+||+++|++.... ... +.+.+......|.+|+++|||+|++++||
T Consensus 151 ~Y~asKaa~~~~~~~la~e~~-~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L 229 (255)
T 4eso_A 151 VYSASKAALVSFASVLAAELL-PRGIRVNSVSPGFIDTPTKGVAGITEAERAEFKTLGDNITPMKRNGTADEVARAVLFL 229 (255)
T ss_dssp HHHHHHHHHHHHHHHHHHHTG-GGTCEEEEEEECSBCCSSTTCTTSCHHHHHHHHHHHHHHSTTSSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHh-hhCcEEEEEecCcccCcccccccCChhhHHHHHHHHhccCCCCCCcCHHHHHHHHHHH
Confidence 999999999999999999998 8899999999999998865432 222 23334456678999999999999999999
Q ss_pred ccC
Q 025672 244 ASD 246 (249)
Q Consensus 244 ~s~ 246 (249)
+|+
T Consensus 230 ~s~ 232 (255)
T 4eso_A 230 AFE 232 (255)
T ss_dssp HHT
T ss_pred cCc
Confidence 997
|
| >4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-47 Score=313.54 Aligned_cols=229 Identities=30% Similarity=0.375 Sum_probs=206.6
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhC
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 88 (249)
.+++|++|||||++|||++++++|+++|++|++++|+.+++++..+++ +.++.++++|++|+++++++++++.++++
T Consensus 5 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 81 (259)
T 4e6p_A 5 RLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEI---GPAAYAVQMDVTRQDSIDAAIAATVEHAG 81 (259)
T ss_dssp TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHHHSS
T ss_pred cCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCCceEEEeeCCCHHHHHHHHHHHHHHcC
Confidence 578999999999999999999999999999999999998888887776 45789999999999999999999999999
Q ss_pred CccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchh
Q 025672 89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH 168 (249)
Q Consensus 89 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~ 168 (249)
++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|.+++. +|+||++||..+..+.++...
T Consensus 82 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~-------~g~iv~isS~~~~~~~~~~~~ 154 (259)
T 4e6p_A 82 GLDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGR-------GGKIINMASQAGRRGEALVAI 154 (259)
T ss_dssp SCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTS-------CEEEEEECCGGGTSCCTTBHH
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC-------CeEEEEECChhhccCCCCChH
Confidence 9999999999988888889999999999999999999999999999987642 389999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCC---------CChHHHHHhhhhhhcccCCCCHHHHHHH
Q 025672 169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK---------LAPEEIRSKATDYMAAYKFGEKWDIAMA 239 (249)
Q Consensus 169 y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~dva~~ 239 (249)
|++||+++++|+++++.|++ ++||+||+|+||+++|++.... ...++..+.+.+..|++|+++|+|+|++
T Consensus 155 Y~asK~a~~~~~~~la~e~~-~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~ 233 (259)
T 4e6p_A 155 YCATKAAVISLTQSAGLDLI-KHRINVNAIAPGVVDGEHWDGVDALFARYENRPRGEKKRLVGEAVPFGRMGTAEDLTGM 233 (259)
T ss_dssp HHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECCBCSTTHHHHHHHHHHHHTCCTTHHHHHHHHHSTTSSCBCTHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhh-hcCCEEEEEEECCCccchhhhhhhhhhhhccCChHHHHHHHhccCCCCCCcCHHHHHHH
Confidence 99999999999999999998 8899999999999998754322 1123444556777899999999999999
Q ss_pred HHHhccCCC
Q 025672 240 ALYLASDAG 248 (249)
Q Consensus 240 v~~l~s~~a 248 (249)
++||+|+++
T Consensus 234 v~~L~s~~~ 242 (259)
T 4e6p_A 234 AIFLASAES 242 (259)
T ss_dssp HHHTTSGGG
T ss_pred HHHHhCCcc
Confidence 999999875
|
| >3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-48 Score=313.93 Aligned_cols=228 Identities=18% Similarity=0.176 Sum_probs=190.1
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
+++++|++|||||++|||++++++|+++|++|++++|+.++++++.+++...+.++.++.+|++|+++++++++++.+.
T Consensus 3 ~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~- 81 (252)
T 3h7a_A 3 LTPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAH- 81 (252)
T ss_dssp --CCSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH-
T ss_pred cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhh-
Confidence 4578999999999999999999999999999999999999999999999888889999999999999999999999999
Q ss_pred CCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch
Q 025672 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 167 (249)
Q Consensus 88 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~ 167 (249)
+++|++|||||.....++.+.+.++|++.+++|+.++++++++++|.|.+++. |+||++||..+..+.++..
T Consensus 82 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~--------g~iv~isS~~~~~~~~~~~ 153 (252)
T 3h7a_A 82 APLEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQ--------GKIFFTGATASLRGGSGFA 153 (252)
T ss_dssp SCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--------EEEEEEEEGGGTCCCTTCH
T ss_pred CCceEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC--------cEEEEECCHHHcCCCCCCc
Confidence 99999999999988888889999999999999999999999999999987653 8999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCeEE-EEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhccC
Q 025672 168 HVSAAKAAVDSITRSLALEWGTDYAIRV-NGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246 (249)
Q Consensus 168 ~y~~sK~a~~~l~~~la~e~~~~~gi~v-~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~ 246 (249)
.|++||+|+.+|+++++.|++ ++||+| |+|+||+|+|++..... ++..+......|.+ +.+|+|+|++++||+++
T Consensus 154 ~Y~asKaa~~~l~~~la~e~~-~~gi~v~n~v~PG~v~T~~~~~~~--~~~~~~~~~~~~~~-~~~pedvA~~~~~l~s~ 229 (252)
T 3h7a_A 154 AFASAKFGLRAVAQSMARELM-PKNIHVAHLIIDSGVDTAWVRERR--EQMFGKDALANPDL-LMPPAAVAGAYWQLYQQ 229 (252)
T ss_dssp HHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEEC------------------------------CCHHHHHHHHHHHHHC
T ss_pred cHHHHHHHHHHHHHHHHHHhh-hcCCEEEEEecCCccCChhhhccc--hhhhhhhhhcCCcc-CCCHHHHHHHHHHHHhC
Confidence 999999999999999999998 889999 99999999987654332 22333445556666 99999999999999986
Q ss_pred CC
Q 025672 247 AG 248 (249)
Q Consensus 247 ~a 248 (249)
.+
T Consensus 230 ~~ 231 (252)
T 3h7a_A 230 PK 231 (252)
T ss_dssp CG
T ss_pred ch
Confidence 43
|
| >3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-48 Score=318.34 Aligned_cols=232 Identities=29% Similarity=0.451 Sum_probs=203.8
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeC-------------CcchHHHHHHHHHhcCCCeeEEEccCCCHHH
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGR-------------RKTVLRSAVAALHSLGIPAIGLEGDVRKRED 75 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r-------------~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~ 75 (249)
++++|++|||||++|||++++++|+++|++|++++| +.+.+++..+++...+.++.++.+|++|+++
T Consensus 8 ~l~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~ 87 (277)
T 3tsc_A 8 KLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDR 87 (277)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHH
T ss_pred ccCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHH
Confidence 588999999999999999999999999999999998 5667778888887778899999999999999
Q ss_pred HHHHHHHHHHHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEec
Q 025672 76 AVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINIS 155 (249)
Q Consensus 76 ~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~is 155 (249)
++++++++.+.++++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|.+++. +|+||++|
T Consensus 88 v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~-------~g~iv~is 160 (277)
T 3tsc_A 88 LRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGR-------GGSIILIS 160 (277)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTS-------CEEEEEEC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCC-------CCEEEEEc
Confidence 99999999999999999999999988888889999999999999999999999999999987642 38999999
Q ss_pred cccccccCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCC---------hHHHHHhhhhhhc
Q 025672 156 ATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA---------PEEIRSKATDYMA 226 (249)
Q Consensus 156 s~~~~~~~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~---------~~~~~~~~~~~~~ 226 (249)
|..+..+.++...|++||+|+.+|+++++.|++ ++||+||+|+||+|+|++...... .+...+.+....|
T Consensus 161 S~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~-~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 239 (277)
T 3tsc_A 161 SAAGMKMQPFMIHYTASKHAVTGLARAFAAELG-KHSIRVNSVHPGPVNTPMGSGDMVTAVGQAMETNPQLSHVLTPFLP 239 (277)
T ss_dssp CGGGTSCCSSCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEESSBSSGGGSHHHHHHHHHHHHTCGGGTTTTCCSSS
T ss_pred cHhhCCCCCCchhhHHHHHHHHHHHHHHHHHhC-ccCeEEEEEEeCCCcCCcccchhhhhhhhcccccHHHHHHhhhccC
Confidence 999999999999999999999999999999998 889999999999999876532110 0111122233345
Q ss_pred ccCCCCHHHHHHHHHHhccCCCC
Q 025672 227 AYKFGEKWDIAMAALYLASDAGQ 249 (249)
Q Consensus 227 ~~~~~~~~dva~~v~~l~s~~a~ 249 (249)
. |+.+|||+|++++||+|++++
T Consensus 240 ~-r~~~pedvA~~v~~L~s~~~~ 261 (277)
T 3tsc_A 240 D-WVAEPEDIADTVCWLASDESR 261 (277)
T ss_dssp C-SCBCHHHHHHHHHHHHSGGGT
T ss_pred C-CCCCHHHHHHHHHHHhCcccc
Confidence 4 789999999999999998753
|
| >1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-47 Score=313.46 Aligned_cols=233 Identities=26% Similarity=0.359 Sum_probs=205.4
Q ss_pred CCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHH
Q 025672 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (249)
Q Consensus 7 ~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 86 (249)
.+++++|++|||||++|||++++++|+++|++|++++|+.++++++.+++...+.++.++.+|++|+++++++++++.+.
T Consensus 16 ~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 95 (273)
T 1ae1_A 16 RWSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHV 95 (273)
T ss_dssp CCCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCCCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence 35688999999999999999999999999999999999998888888888777778999999999999999999999999
Q ss_pred h-CCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCcc
Q 025672 87 F-GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY 165 (249)
Q Consensus 87 ~-~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~ 165 (249)
+ +++|+||||||.....++.+.+.++|+..+++|+.++++++++++|.|.+++. |+||++||..+..+.++
T Consensus 96 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~--------g~iv~isS~~~~~~~~~ 167 (273)
T 1ae1_A 96 FDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQN--------GNVIFLSSIAGFSALPS 167 (273)
T ss_dssp TTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTS--------EEEEEECCGGGTSCCTT
T ss_pred cCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC--------cEEEEEcCHhhcCCCCC
Confidence 9 99999999999887778888999999999999999999999999999987643 89999999999999899
Q ss_pred chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCC----hHHHHHhhhhhhcccCCCCHHHHHHHHH
Q 025672 166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA----PEEIRSKATDYMAAYKFGEKWDIAMAAL 241 (249)
Q Consensus 166 ~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~dva~~v~ 241 (249)
...|++||+++++|+++++.|++ ++||+||+|+||+++|++...... .++..+.+....|.+|+++|+|+|+++.
T Consensus 168 ~~~Y~asK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~ 246 (273)
T 1ae1_A 168 VSLYSASKGAINQMTKSLACEWA-KDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQEVSALIA 246 (273)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBC-------------CHHHHHHHHHHSTTCSCBCHHHHHHHHH
T ss_pred cchhHHHHHHHHHHHHHHHHHHh-hcCcEEEEEEeCCCcCchhhhhhhcccCcHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence 99999999999999999999998 889999999999999876443222 2334445556688999999999999999
Q ss_pred HhccCCC
Q 025672 242 YLASDAG 248 (249)
Q Consensus 242 ~l~s~~a 248 (249)
||+++++
T Consensus 247 ~l~s~~~ 253 (273)
T 1ae1_A 247 FLCFPAA 253 (273)
T ss_dssp HHHSGGG
T ss_pred HHhCccc
Confidence 9999864
|
| >3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-47 Score=317.44 Aligned_cols=232 Identities=26% Similarity=0.337 Sum_probs=203.4
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeC-------------CcchHHHHHHHHHhcCCCeeEEEccCCCHH
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGR-------------RKTVLRSAVAALHSLGIPAIGLEGDVRKRE 74 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r-------------~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~ 74 (249)
.++++|++|||||++|||++++++|+++|++|++++| +.++++++.+++...+.++.++.+|++|++
T Consensus 11 ~~l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~ 90 (280)
T 3pgx_A 11 GSLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDA 90 (280)
T ss_dssp CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHH
T ss_pred cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHH
Confidence 4589999999999999999999999999999999998 677788888888887889999999999999
Q ss_pred HHHHHHHHHHHHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEe
Q 025672 75 DAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINI 154 (249)
Q Consensus 75 ~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~i 154 (249)
+++++++++.+.++++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|.+++. +|+||++
T Consensus 91 ~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~-------~g~iv~i 163 (280)
T 3pgx_A 91 ALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGN-------GGSIVVV 163 (280)
T ss_dssp HHHHHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCS-------CEEEEEE
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCC-------CCEEEEE
Confidence 999999999999999999999999988888889999999999999999999999999999987642 3899999
Q ss_pred ccccccccCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHH------Hh--hhhhhc
Q 025672 155 SATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIR------SK--ATDYMA 226 (249)
Q Consensus 155 ss~~~~~~~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~------~~--~~~~~~ 226 (249)
||..+..+.++...|++||+|+.+|+++++.|++ ++||+||+|+||+|+|++.......+.+. +. .....|
T Consensus 164 sS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~-~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (280)
T 3pgx_A 164 SSSAGLKATPGNGHYSASKHGLTALTNTLAIELG-EYGIRVNSIHPYSVETPMIEPEAMMEIFARHPSFVHSFPPMPVQP 242 (280)
T ss_dssp CCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCSTTCCHHHHHHHHHHCGGGGGGSCCBTTBC
T ss_pred cchhhccCCCCchhHHHHHHHHHHHHHHHHHHhh-hcCeEEEEEeeCcccCcccchhhhhhhhhcCchhhhhhhhcccCC
Confidence 9999999999999999999999999999999998 89999999999999987643211111110 00 112234
Q ss_pred ccCCCCHHHHHHHHHHhccCCC
Q 025672 227 AYKFGEKWDIAMAALYLASDAG 248 (249)
Q Consensus 227 ~~~~~~~~dva~~v~~l~s~~a 248 (249)
. |+.+|+|+|++++||+|+++
T Consensus 243 ~-r~~~p~dvA~~v~~L~s~~~ 263 (280)
T 3pgx_A 243 N-GFMTADEVADVVAWLAGDGS 263 (280)
T ss_dssp S-SCBCHHHHHHHHHHHHSGGG
T ss_pred C-CCCCHHHHHHHHHHHhCccc
Confidence 4 78899999999999999876
|
| >3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-47 Score=317.44 Aligned_cols=232 Identities=26% Similarity=0.382 Sum_probs=203.3
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCC------------cchHHHHHHHHHhcCCCeeEEEccCCCHHHH
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR------------KTVLRSAVAALHSLGIPAIGLEGDVRKREDA 76 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~------------~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~ 76 (249)
++++|++|||||++|||+++|++|+++|++|++++|+ .+.+++..+++...+.++.++++|++|++++
T Consensus 25 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v 104 (299)
T 3t7c_A 25 KVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDAM 104 (299)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHH
T ss_pred ccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHHH
Confidence 4889999999999999999999999999999999987 6677888888888888999999999999999
Q ss_pred HHHHHHHHHHhCCccEEEEcCCCCCCCC-CCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEec
Q 025672 77 VRVVESTINHFGKLDILVNAAAGNFLVP-AEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINIS 155 (249)
Q Consensus 77 ~~~~~~~~~~~~~id~vi~~ag~~~~~~-~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~is 155 (249)
+++++++.+.++++|+||||||+....+ +.+.+.++|++.+++|+.++++++++++|.|.+++. +|+||++|
T Consensus 105 ~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~-------~g~Iv~is 177 (299)
T 3t7c_A 105 QAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKR-------GGSIVFTS 177 (299)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTS-------CEEEEEEC
T ss_pred HHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC-------CcEEEEEC
Confidence 9999999999999999999999876654 888999999999999999999999999999877542 48999999
Q ss_pred cccccccCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCC------------ChHHHH--Hhh
Q 025672 156 ATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL------------APEEIR--SKA 221 (249)
Q Consensus 156 s~~~~~~~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~------------~~~~~~--~~~ 221 (249)
|..+..+.++...|++||+|+.+|+++++.|++ ++||+||+|+||+|+|++..... ..+... ...
T Consensus 178 S~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~-~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (299)
T 3t7c_A 178 SIGGLRGAENIGNYIASKHGLHGLMRTMALELG-PRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENPTVEDFQVASRQ 256 (299)
T ss_dssp CGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEESCBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHHHH
T ss_pred ChhhccCCCCcchHHHHHHHHHHHHHHHHHHhc-ccCcEEEEEecCCccCccccccchhhhhhhhhccchhhHHHHHhhh
Confidence 999999999999999999999999999999998 88999999999999988654211 111111 123
Q ss_pred hhhhcccCCCCHHHHHHHHHHhccCCCC
Q 025672 222 TDYMAAYKFGEKWDIAMAALYLASDAGQ 249 (249)
Q Consensus 222 ~~~~~~~~~~~~~dva~~v~~l~s~~a~ 249 (249)
....| +|+++|+|+|++++||+|++++
T Consensus 257 ~~~~p-~r~~~pedvA~~v~fL~s~~a~ 283 (299)
T 3t7c_A 257 MHVLP-IPYVEPADISNAILFLVSDDAR 283 (299)
T ss_dssp HSSSS-CSCBCHHHHHHHHHHHHSGGGT
T ss_pred hcccC-cCCCCHHHHHHHHHHHhCcccc
Confidence 34455 7899999999999999998753
|
| >4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-48 Score=318.73 Aligned_cols=232 Identities=23% Similarity=0.276 Sum_probs=208.2
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
+++++|++|||||++|||++++++|+++|++|++++|+.+.++++.+++...+.++.++.+|++|+++++++++++.+.
T Consensus 29 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~- 107 (275)
T 4imr_A 29 FGLRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEAI- 107 (275)
T ss_dssp HCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHH-
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHh-
Confidence 3588999999999999999999999999999999999999999999999888889999999999999999999999877
Q ss_pred CCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch
Q 025672 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 167 (249)
Q Consensus 88 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~ 167 (249)
+++|++|||||.....++.+.+.++|++.+++|+.++++++++++|.|.+++. |+||++||..+..+.+...
T Consensus 108 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~--------g~Iv~isS~~~~~~~~~~~ 179 (275)
T 4imr_A 108 APVDILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKW--------GRVVSIGSINQLRPKSVVT 179 (275)
T ss_dssp SCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--------EEEEEECCGGGTSCCTTBH
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC--------cEEEEECCHHhCCCCCCch
Confidence 99999999999988888889999999999999999999999999999987653 8999999999999888888
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCC-hHHHHHhhhhhh-cccCCCCHHHHHHHHHHhcc
Q 025672 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA-PEEIRSKATDYM-AAYKFGEKWDIAMAALYLAS 245 (249)
Q Consensus 168 ~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~dva~~v~~l~s 245 (249)
.|++||+|+.+|+++++.|++ ++||+||+|+||+|+|++...... .++..+.+.... |++|+++|||+|++++||+|
T Consensus 180 ~Y~asKaa~~~l~~~la~e~~-~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~fL~s 258 (275)
T 4imr_A 180 AYAATKAAQHNLIQSQARDFA-GDNVLLNTLAPGLVDTDRNADRRAQDPEGWDEYVRTLNWMGRAGRPEEMVGAALFLAS 258 (275)
T ss_dssp HHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEESSBCSHHHHHHHHHCHHHHHHHHHHHSTTCSCBCGGGGHHHHHHHHS
T ss_pred hhHHHHHHHHHHHHHHHHHhc-ccCcEEEEEEeccccCcccccccccChHHHHHHHhhcCccCCCcCHHHHHHHHHHHcC
Confidence 999999999999999999998 889999999999999875433211 123333444445 89999999999999999999
Q ss_pred CCCC
Q 025672 246 DAGQ 249 (249)
Q Consensus 246 ~~a~ 249 (249)
++++
T Consensus 259 ~~a~ 262 (275)
T 4imr_A 259 EACS 262 (275)
T ss_dssp GGGT
T ss_pred cccC
Confidence 8753
|
| >4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-47 Score=316.66 Aligned_cols=232 Identities=25% Similarity=0.336 Sum_probs=186.9
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeC-CcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGR-RKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r-~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
.+++|++|||||++|||++++++|+++|++|++++| +.+.++++.+++...+.++.++++|++|+++++++++++.+.+
T Consensus 26 ~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 105 (280)
T 4da9_A 26 QKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAEF 105 (280)
T ss_dssp CCCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHHH
T ss_pred ccCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 478999999999999999999999999999999995 6777888888888888899999999999999999999999999
Q ss_pred CCccEEEEcCCC--CCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCcc
Q 025672 88 GKLDILVNAAAG--NFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY 165 (249)
Q Consensus 88 ~~id~vi~~ag~--~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~ 165 (249)
+++|+||||||. ....++.+.+.++|++.+++|+.++++++++++|.|.+++.. .+|+||++||..+..+.++
T Consensus 106 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~-----~~g~Iv~isS~~~~~~~~~ 180 (280)
T 4da9_A 106 GRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDAR-----ASRSIINITSVSAVMTSPE 180 (280)
T ss_dssp SCCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCC-----CCEEEEEECCC-------C
T ss_pred CCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCC-----CCCEEEEEcchhhccCCCC
Confidence 999999999998 445778889999999999999999999999999999875421 1389999999999999999
Q ss_pred chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhh-hhcccCCCCHHHHHHHHHHhc
Q 025672 166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATD-YMAAYKFGEKWDIAMAALYLA 244 (249)
Q Consensus 166 ~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~dva~~v~~l~ 244 (249)
...|++||+|+.+|+++++.|++ ++||+||+|+||+|+|++.... . +...+.... ..|++|+++|+|+|++++||+
T Consensus 181 ~~~Y~asKaa~~~l~~~la~e~~-~~gI~vn~v~PG~v~T~~~~~~-~-~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~ 257 (280)
T 4da9_A 181 RLDYCMSKAGLAAFSQGLALRLA-ETGIAVFEVRPGIIRSDMTAAV-S-GKYDGLIESGLVPMRRWGEPEDIGNIVAGLA 257 (280)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHT-TTTEEEEEEEECCBCC------------------------CCBCHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHHH-HhCcEEEEEeecCCcCCchhhc-c-hhHHHHHhhcCCCcCCcCCHHHHHHHHHHHh
Confidence 99999999999999999999998 8999999999999998765432 2 222233333 688999999999999999999
Q ss_pred cCCC
Q 025672 245 SDAG 248 (249)
Q Consensus 245 s~~a 248 (249)
|+++
T Consensus 258 s~~~ 261 (280)
T 4da9_A 258 GGQF 261 (280)
T ss_dssp TSTT
T ss_pred Cccc
Confidence 9876
|
| >3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-47 Score=316.04 Aligned_cols=232 Identities=28% Similarity=0.386 Sum_probs=199.9
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeC-CcchHHHHHHHHHhc-CCCeeEEEccCCCHHHHHHHHHHHHH
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGR-RKTVLRSAVAALHSL-GIPAIGLEGDVRKREDAVRVVESTIN 85 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r-~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~ 85 (249)
+++++|++|||||++|||++++++|+++|++|++++| +.+.++.+.+++... +.++.++.+|++|+++++++++++.+
T Consensus 21 ~~l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 100 (281)
T 3v2h_A 21 QSMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVAD 100 (281)
T ss_dssp -CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHH
T ss_pred hccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHH
Confidence 4578999999999999999999999999999999999 566778888888654 67899999999999999999999999
Q ss_pred HhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCcc
Q 025672 86 HFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY 165 (249)
Q Consensus 86 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~ 165 (249)
.++++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|.+++. |+||++||..+..+.++
T Consensus 101 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~--------g~iv~isS~~~~~~~~~ 172 (281)
T 3v2h_A 101 RFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGW--------GRIINIASAHGLVASPF 172 (281)
T ss_dssp HTSSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--------EEEEEECCGGGTSCCTT
T ss_pred HCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCC--------CEEEEECCcccccCCCC
Confidence 9999999999999988888889999999999999999999999999999988754 89999999999999999
Q ss_pred chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCCh---------HH-HHHhhhhhhcccCCCCHHH
Q 025672 166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP---------EE-IRSKATDYMAAYKFGEKWD 235 (249)
Q Consensus 166 ~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~---------~~-~~~~~~~~~~~~~~~~~~d 235 (249)
...|++||+|+.+|+++++.|++ ++||+||+|+||+|+|++....... ++ ..+.+....|.+|+.+|+|
T Consensus 173 ~~~Y~asKaa~~~l~~~la~e~~-~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~ed 251 (281)
T 3v2h_A 173 KSAYVAAKHGIMGLTKTVALEVA-ESGVTVNSICPGYVLTPLVEKQIPDQARTRGITEEQVINEVMLKGQPTKKFITVEQ 251 (281)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCC----------------------------CCTTCSCBCHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHhh-hcCcEEEEEECCCCcCcchhhhcchhhhhcCCCHHHHHHHHHHhcCCCCCccCHHH
Confidence 99999999999999999999998 8899999999999998765433221 11 1223556688999999999
Q ss_pred HHHHHHHhccCCC
Q 025672 236 IAMAALYLASDAG 248 (249)
Q Consensus 236 va~~v~~l~s~~a 248 (249)
+|++++||+|+++
T Consensus 252 vA~~v~~L~s~~a 264 (281)
T 3v2h_A 252 VASLALYLAGDDA 264 (281)
T ss_dssp HHHHHHHHHSSGG
T ss_pred HHHHHHHHcCCCc
Confidence 9999999999875
|
| >3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-47 Score=308.36 Aligned_cols=230 Identities=29% Similarity=0.315 Sum_probs=211.4
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
|++++|++|||||++|||++++++|+++|++|++++|+.+.++++.+++...+.++.++++|++|+++++++++++.+.+
T Consensus 1 m~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 80 (247)
T 3lyl_A 1 MSLNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAEN 80 (247)
T ss_dssp CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTT
T ss_pred CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence 45789999999999999999999999999999999999999999999998888899999999999999999999999999
Q ss_pred CCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch
Q 025672 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 167 (249)
Q Consensus 88 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~ 167 (249)
+++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|.+++. |+||++||..+..+.++..
T Consensus 81 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--------g~iv~isS~~~~~~~~~~~ 152 (247)
T 3lyl_A 81 LAIDILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRW--------GRIISIGSVVGSAGNPGQT 152 (247)
T ss_dssp CCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--------EEEEEECCTHHHHCCTTCH
T ss_pred CCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCC--------eEEEEEcchhhccCCCCcH
Confidence 99999999999988788888999999999999999999999999999987653 8999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhccCC
Q 025672 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247 (249)
Q Consensus 168 ~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~ 247 (249)
.|++||+|+.+|+++++.|++ ++||+||+|+||+++|++... . .++..+.+....|.+|+.+|+|+|+++.||++++
T Consensus 153 ~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~PG~v~t~~~~~-~-~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~~ 229 (247)
T 3lyl_A 153 NYCAAKAGVIGFSKSLAYEVA-SRNITVNVVAPGFIATDMTDK-L-TDEQKSFIATKIPSGQIGEPKDIAAAVAFLASEE 229 (247)
T ss_dssp HHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCCTTTTT-S-CHHHHHHHHTTSTTCCCBCHHHHHHHHHHHHSGG
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HcCeEEEEEeeCcEecccchh-c-cHHHHHHHhhcCCCCCCcCHHHHHHHHHHHhCCC
Confidence 999999999999999999998 889999999999999875433 3 3344556677789999999999999999999986
Q ss_pred C
Q 025672 248 G 248 (249)
Q Consensus 248 a 248 (249)
+
T Consensus 230 ~ 230 (247)
T 3lyl_A 230 A 230 (247)
T ss_dssp G
T ss_pred c
Confidence 5
|
| >1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-47 Score=312.99 Aligned_cols=231 Identities=26% Similarity=0.424 Sum_probs=207.3
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhC
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 88 (249)
++++|++|||||++|||++++++|+++|++|++++|+.+.++++.+++...+.++.++.+|++|+++++++++++.+.++
T Consensus 4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 83 (262)
T 1zem_A 4 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFG 83 (262)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhC
Confidence 47899999999999999999999999999999999999888888888877777899999999999999999999999999
Q ss_pred CccEEEEcCCCC-CCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch
Q 025672 89 KLDILVNAAAGN-FLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 167 (249)
Q Consensus 89 ~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~ 167 (249)
++|+||||||.. ...++.+.+.++|++.+++|+.++++++++++|.|.+++. |+||++||..+..+.++..
T Consensus 84 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~--------g~iv~isS~~~~~~~~~~~ 155 (262)
T 1zem_A 84 KIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNY--------GRIVNTASMAGVKGPPNMA 155 (262)
T ss_dssp CCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--------EEEEEECCHHHHSCCTTBH
T ss_pred CCCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC--------cEEEEEcchhhccCCCCCc
Confidence 999999999987 5677888899999999999999999999999999987653 8999999999999988999
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCC------------CC-hHH-HHHhhhhhhcccCCCCH
Q 025672 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK------------LA-PEE-IRSKATDYMAAYKFGEK 233 (249)
Q Consensus 168 ~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~------------~~-~~~-~~~~~~~~~~~~~~~~~ 233 (249)
.|++||+++.+|+++++.|++ ++||+||+|+||+++|++.... .. .++ ..+.+....|++|+++|
T Consensus 156 ~Y~asK~a~~~~~~~la~e~~-~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p 234 (262)
T 1zem_A 156 AYGTSKGAIIALTETAALDLA-PYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDI 234 (262)
T ss_dssp HHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTSTTSSCBCG
T ss_pred hHHHHHHHHHHHHHHHHHHHH-hhCeEEEEEecCCcCcchhhhhccchhhhccccccccCHHHHHHHHHhcCCCCCCcCH
Confidence 999999999999999999998 8899999999999998764321 11 223 44445566789999999
Q ss_pred HHHHHHHHHhccCCC
Q 025672 234 WDIAMAALYLASDAG 248 (249)
Q Consensus 234 ~dva~~v~~l~s~~a 248 (249)
+|+|++++||+|+++
T Consensus 235 ~dvA~~v~~l~s~~~ 249 (262)
T 1zem_A 235 NEIPGVVAFLLGDDS 249 (262)
T ss_dssp GGSHHHHHHHHSGGG
T ss_pred HHHHHHHHHHcCchh
Confidence 999999999999865
|
| >3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-47 Score=314.90 Aligned_cols=231 Identities=29% Similarity=0.379 Sum_probs=205.6
Q ss_pred CCCCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCC-cchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHH
Q 025672 5 FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR-KTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVEST 83 (249)
Q Consensus 5 ~~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~-~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 83 (249)
|..+++++|++|||||++|||++++++|+++|++|++++++ .+.++++.+++...+.++.++.+|++|+++++++++++
T Consensus 24 m~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~ 103 (271)
T 3v2g_A 24 MTSISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRET 103 (271)
T ss_dssp HTTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred ccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHH
Confidence 34567899999999999999999999999999999998665 46678888888888889999999999999999999999
Q ss_pred HHHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc-
Q 025672 84 INHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA- 162 (249)
Q Consensus 84 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~- 162 (249)
.+.+|++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|.+ +|+||++||..+..+
T Consensus 104 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~----------~g~iv~isS~~~~~~~ 173 (271)
T 3v2g_A 104 VEALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGD----------GGRIITIGSNLAELVP 173 (271)
T ss_dssp HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCT----------TCEEEEECCGGGTCCC
T ss_pred HHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc----------CCEEEEEeChhhccCC
Confidence 999999999999999988888889999999999999999999999999999854 288999999776655
Q ss_pred CccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHH
Q 025672 163 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALY 242 (249)
Q Consensus 163 ~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~ 242 (249)
.++...|++||+|+.+|+++++.|++ ++||+||+|+||+|+|++..... +..+......|.+|+++|||+|++++|
T Consensus 174 ~~~~~~Y~asKaa~~~l~~~la~e~~-~~gIrvn~v~PG~v~T~~~~~~~---~~~~~~~~~~~~~r~~~pedvA~~v~f 249 (271)
T 3v2g_A 174 WPGISLYSASKAALAGLTKGLARDLG-PRGITVNIVHPGSTDTDMNPADG---DHAEAQRERIATGSYGEPQDIAGLVAW 249 (271)
T ss_dssp STTCHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECSBCSSSSCSSC---SSHHHHHHTCTTSSCBCHHHHHHHHHH
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHhh-hhCeEEEEEecCCCcCCcccccc---hhHHHHHhcCCCCCCCCHHHHHHHHHH
Confidence 68899999999999999999999998 88999999999999988654322 223445667899999999999999999
Q ss_pred hccCCCC
Q 025672 243 LASDAGQ 249 (249)
Q Consensus 243 l~s~~a~ 249 (249)
|+|++++
T Consensus 250 L~s~~~~ 256 (271)
T 3v2g_A 250 LAGPQGK 256 (271)
T ss_dssp HHSGGGT
T ss_pred HhCcccC
Confidence 9998753
|
| >3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-48 Score=320.85 Aligned_cols=233 Identities=28% Similarity=0.358 Sum_probs=207.4
Q ss_pred CCCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCc--chHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHH
Q 025672 6 KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK--TVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVEST 83 (249)
Q Consensus 6 ~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~--~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 83 (249)
..+++++|++|||||++|||++++++|+++|++|++++|+. +..+.+.+++...+.++.++++|++|+++++++++++
T Consensus 43 ~~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~ 122 (294)
T 3r3s_A 43 GSGRLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKA 122 (294)
T ss_dssp CCSTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHH
T ss_pred cccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHH
Confidence 34568999999999999999999999999999999999873 3466777777777889999999999999999999999
Q ss_pred HHHhCCccEEEEcCCCCC-CCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc
Q 025672 84 INHFGKLDILVNAAAGNF-LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 162 (249)
Q Consensus 84 ~~~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~ 162 (249)
.+.++++|++|||||... ..++.+.+.++|++.+++|+.++++++++++|.|.+ +|+||++||..+..+
T Consensus 123 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~----------~g~Iv~isS~~~~~~ 192 (294)
T 3r3s_A 123 REALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPK----------GASIITTSSIQAYQP 192 (294)
T ss_dssp HHHHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCT----------TCEEEEECCGGGTSC
T ss_pred HHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhc----------CCEEEEECChhhccC
Confidence 999999999999999865 467888999999999999999999999999998854 288999999999999
Q ss_pred CccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHH
Q 025672 163 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALY 242 (249)
Q Consensus 163 ~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~ 242 (249)
.++...|++||+|+++|+++++.|++ ++||+||+|+||+|+|++.......++..+.+....|++|+++|+|+|++++|
T Consensus 193 ~~~~~~Y~asKaa~~~l~~~la~e~~-~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~ 271 (294)
T 3r3s_A 193 SPHLLDYAATKAAILNYSRGLAKQVA-EKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMKRAGQPAELAPVYVY 271 (294)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECSBCSHHHHTTTSCGGGSTTTTTTSTTSSCBCGGGGHHHHHH
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHHh-hcCeEEEEEecCcCccccccccCCCHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence 99999999999999999999999998 88999999999999987644333334445566777899999999999999999
Q ss_pred hccCCCC
Q 025672 243 LASDAGQ 249 (249)
Q Consensus 243 l~s~~a~ 249 (249)
|+|++++
T Consensus 272 L~s~~~~ 278 (294)
T 3r3s_A 272 LASQESS 278 (294)
T ss_dssp HHSGGGT
T ss_pred HhCcccc
Confidence 9998753
|
| >3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-47 Score=316.64 Aligned_cols=231 Identities=24% Similarity=0.262 Sum_probs=204.6
Q ss_pred CCCCCCCcEEEEecCCC--chhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHH
Q 025672 6 KGDILKGKVALLTGGGS--GIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVEST 83 (249)
Q Consensus 6 ~~~~l~~k~~lItGa~~--giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 83 (249)
..+++++|++|||||+| |||+++|++|+++|++|++++|+.+..+.+.+.....+ .+.+++||++|+++++++++++
T Consensus 24 ~~~~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~ 102 (296)
T 3k31_A 24 TGMLMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLG-VKLTVPCDVSDAESVDNMFKVL 102 (296)
T ss_dssp CCCTTTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHT-CCEEEECCTTCHHHHHHHHHHH
T ss_pred chhccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcC-CeEEEEcCCCCHHHHHHHHHHH
Confidence 45668999999999997 99999999999999999999999766555555544433 4689999999999999999999
Q ss_pred HHHhCCccEEEEcCCCCCC----CCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccc
Q 025672 84 INHFGKLDILVNAAAGNFL----VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH 159 (249)
Q Consensus 84 ~~~~~~id~vi~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~ 159 (249)
.+.+|++|+||||||+... .++.+.+.++|++.+++|+.++++++++++|.|.+ +|+||++||..+
T Consensus 103 ~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~----------~g~IV~isS~~~ 172 (296)
T 3k31_A 103 AEEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTN----------GGSILTLSYYGA 172 (296)
T ss_dssp HHHHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTT----------CEEEEEEECGGG
T ss_pred HHHcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc----------CCEEEEEEehhh
Confidence 9999999999999998764 67788999999999999999999999999998865 289999999999
Q ss_pred cccCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHH
Q 025672 160 YTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMA 239 (249)
Q Consensus 160 ~~~~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~ 239 (249)
..+.++...|++||+|+.+|+++++.|++ ++||+||+|+||+|+|++.......+...+......|++|+++|||+|++
T Consensus 173 ~~~~~~~~~Y~asKaal~~l~~~la~e~~-~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~ 251 (296)
T 3k31_A 173 EKVVPHYNVMGVCKAALEASVKYLAVDLG-KQQIRVNAISAGPVRTLASSGISDFHYILTWNKYNSPLRRNTTLDDVGGA 251 (296)
T ss_dssp TSCCTTTTHHHHHHHHHHHHHHHHHHHHH-TTTEEEEEEEECCCCCSSCCSCHHHHHHHHHHHHHSTTSSCCCHHHHHHH
T ss_pred ccCCCCchhhHHHHHHHHHHHHHHHHHHh-hcCcEEEEEEECCCcCchhhcccchHHHHHHHHhcCCCCCCCCHHHHHHH
Confidence 99999999999999999999999999998 88999999999999987654433334556667778899999999999999
Q ss_pred HHHhccCCC
Q 025672 240 ALYLASDAG 248 (249)
Q Consensus 240 v~~l~s~~a 248 (249)
++||+|+++
T Consensus 252 v~fL~s~~a 260 (296)
T 3k31_A 252 ALYLLSDLG 260 (296)
T ss_dssp HHHHHSGGG
T ss_pred HHHHcCCcc
Confidence 999999865
|
| >1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-47 Score=311.63 Aligned_cols=235 Identities=32% Similarity=0.477 Sum_probs=206.0
Q ss_pred CCCCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHH-HhcCCCeeEEEccCCCHHHHHHHHHHH
Q 025672 5 FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAAL-HSLGIPAIGLEGDVRKREDAVRVVEST 83 (249)
Q Consensus 5 ~~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~-~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 83 (249)
.+...+++|++|||||++|||++++++|+++|++|++++|+.++++++.+++ ...+.++.++.+|++|+++++++++++
T Consensus 14 ~~~~~l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~ 93 (267)
T 1vl8_A 14 KEVFDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAV 93 (267)
T ss_dssp ---CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHH
Confidence 3455688999999999999999999999999999999999998888888777 445678899999999999999999999
Q ss_pred HHHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccc-cccc
Q 025672 84 INHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL-HYTA 162 (249)
Q Consensus 84 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~-~~~~ 162 (249)
.+.++++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|.+++ .|+||++||.. +..+
T Consensus 94 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~--------~g~iv~isS~~~~~~~ 165 (267)
T 1vl8_A 94 KEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESD--------NPSIINIGSLTVEEVT 165 (267)
T ss_dssp HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCS--------SCEEEEECCGGGTCCC
T ss_pred HHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC--------CcEEEEECCcchhccC
Confidence 99999999999999988777788899999999999999999999999999997754 38999999998 8888
Q ss_pred CccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHH
Q 025672 163 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALY 242 (249)
Q Consensus 163 ~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~ 242 (249)
.++...|++||+++++|+++++.|++ ++||+||+|+||+++|++.......++..+.+....|.+|+.+|+|+|++++|
T Consensus 166 ~~~~~~Y~asK~a~~~~~~~la~e~~-~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~ 244 (267)
T 1vl8_A 166 MPNISAYAASKGGVASLTKALAKEWG-RYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPLGRTGVPEDLKGVAVF 244 (267)
T ss_dssp SSSCHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECCBCSTTTHHHHTCHHHHHHHHHTCTTSSCBCGGGGHHHHHH
T ss_pred CCCChhHHHHHHHHHHHHHHHHHHhc-ccCeEEEEEEeccCccccccccccChHHHHHHHhhCCCCCCcCHHHHHHHHHH
Confidence 88899999999999999999999998 88999999999999987643221122334445566788999999999999999
Q ss_pred hccCCC
Q 025672 243 LASDAG 248 (249)
Q Consensus 243 l~s~~a 248 (249)
|+++++
T Consensus 245 l~s~~~ 250 (267)
T 1vl8_A 245 LASEEA 250 (267)
T ss_dssp HHSGGG
T ss_pred HcCccc
Confidence 999864
|
| >2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-47 Score=309.52 Aligned_cols=233 Identities=30% Similarity=0.429 Sum_probs=207.2
Q ss_pred CCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHH
Q 025672 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (249)
Q Consensus 7 ~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 86 (249)
.+++++|++|||||++|||++++++|+++|++|++++|+.+.++++.+++...+.++.++++|++|+++++++++++.+.
T Consensus 4 ~~~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 83 (260)
T 2ae2_A 4 RWNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANH 83 (260)
T ss_dssp TTCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 34688999999999999999999999999999999999999888888888776778999999999999999999999999
Q ss_pred h-CCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCcc
Q 025672 87 F-GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY 165 (249)
Q Consensus 87 ~-~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~ 165 (249)
+ +++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|.+++. |+||++||..+..+.++
T Consensus 84 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~--------g~iv~isS~~~~~~~~~ 155 (260)
T 2ae2_A 84 FHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASER--------GNVVFISSVSGALAVPY 155 (260)
T ss_dssp TTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSS--------EEEEEECCGGGTSCCTT
T ss_pred cCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC--------cEEEEEcchhhccCCCC
Confidence 9 89999999999887777888899999999999999999999999999987643 89999999999988889
Q ss_pred chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHH---hhhhhhcccCCCCHHHHHHHHHH
Q 025672 166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRS---KATDYMAAYKFGEKWDIAMAALY 242 (249)
Q Consensus 166 ~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~dva~~v~~ 242 (249)
...|++||+++++|+++++.|++ ++||+||+|+||+++|++.......+...+ .+....|.+|+.+|+|+|++++|
T Consensus 156 ~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~v~~ 234 (260)
T 2ae2_A 156 EAVYGATKGAMDQLTRCLAFEWA-KDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVAF 234 (260)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTG-GGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTSTTCSCBCHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHHHh-hcCcEEEEEecCCCCCcchhhhccChhhHHHHHHHHhcCCCCCCCCHHHHHHHHHH
Confidence 99999999999999999999998 889999999999999875432222222222 44556788999999999999999
Q ss_pred hccCCC
Q 025672 243 LASDAG 248 (249)
Q Consensus 243 l~s~~a 248 (249)
|+++++
T Consensus 235 l~s~~~ 240 (260)
T 2ae2_A 235 LCFPAA 240 (260)
T ss_dssp HHSGGG
T ss_pred HcCccc
Confidence 999864
|
| >3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-47 Score=312.74 Aligned_cols=230 Identities=23% Similarity=0.356 Sum_probs=191.9
Q ss_pred CCCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEE-eCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHH
Q 025672 6 KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIM-GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTI 84 (249)
Q Consensus 6 ~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~-~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 84 (249)
+.+++++|++|||||++|||++++++|+++|++|+++ +++.+..++..+++...+.++.++++|++|+++++++++++.
T Consensus 2 ~~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 81 (259)
T 3edm_A 2 SLQRFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAA 81 (259)
T ss_dssp --CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHH
T ss_pred CccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHH
Confidence 3567899999999999999999999999999999998 666777788888888778889999999999999999999999
Q ss_pred HHhCCccEEEEcCCCC-CCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccc-cc
Q 025672 85 NHFGKLDILVNAAAGN-FLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY-TA 162 (249)
Q Consensus 85 ~~~~~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~-~~ 162 (249)
+.+|++|++|||||.. ...++.+.+.++|++.+++|+.++++++++++|.|.+. |+||++||..+. .+
T Consensus 82 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~----------g~iv~isS~~~~~~~ 151 (259)
T 3edm_A 82 DKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKG----------GAIVTFSSQAGRDGG 151 (259)
T ss_dssp HHHCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEE----------EEEEEECCHHHHHCC
T ss_pred HHhCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcC----------CEEEEEcCHHhccCC
Confidence 9999999999999987 56788899999999999999999999999999998652 889999999888 67
Q ss_pred CccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHH
Q 025672 163 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALY 242 (249)
Q Consensus 163 ~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~ 242 (249)
.++...|++||+|+.+|+++++.|++ +. |+||+|+||+|+|++.... ..++..+.+....|++|+++|+|+|++++|
T Consensus 152 ~~~~~~Y~asKaa~~~l~~~la~e~~-~~-I~vn~v~PG~v~T~~~~~~-~~~~~~~~~~~~~p~~r~~~pedva~~v~~ 228 (259)
T 3edm_A 152 GPGALAYATSKGAVMTFTRGLAKEVG-PK-IRVNAVCPGMISTTFHDTF-TKPEVRERVAGATSLKREGSSEDVAGLVAF 228 (259)
T ss_dssp STTCHHHHHHHHHHHHHHHHHHHHHT-TT-CEEEEEEECCBCC-----------------------CCBCHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHC-CC-CEEEEEEECCCcCcccccc-cChHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence 88899999999999999999999998 65 9999999999998765433 334555667778899999999999999999
Q ss_pred hccCCC
Q 025672 243 LASDAG 248 (249)
Q Consensus 243 l~s~~a 248 (249)
|+|+++
T Consensus 229 L~s~~~ 234 (259)
T 3edm_A 229 LASDDA 234 (259)
T ss_dssp HHSGGG
T ss_pred HcCccc
Confidence 999875
|
| >3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-46 Score=305.80 Aligned_cols=229 Identities=23% Similarity=0.316 Sum_probs=203.0
Q ss_pred CCCCCCCCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcC-CCeeEEEccC--CCHHHHH
Q 025672 1 MESPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG-IPAIGLEGDV--RKREDAV 77 (249)
Q Consensus 1 ~~~~~~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dl--~~~~~~~ 77 (249)
|..+.....+++|++|||||++|||++++++|+++|++|++++|+.++++++.+++...+ .++.++.+|+ +|+++++
T Consensus 1 M~~~~~~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~ 80 (252)
T 3f1l_A 1 MHYQPKQDLLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQ 80 (252)
T ss_dssp CCCCCCTTTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHH
T ss_pred CCcCCcccccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHH
Confidence 555556677999999999999999999999999999999999999999999888886543 4789999999 9999999
Q ss_pred HHHHHHHHHhCCccEEEEcCCCCC-CCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecc
Q 025672 78 RVVESTINHFGKLDILVNAAAGNF-LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISA 156 (249)
Q Consensus 78 ~~~~~~~~~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss 156 (249)
++++++.+.++++|+||||||... ..++.+.+.++|++.+++|+.++++++++++|.|.+++. |+||++||
T Consensus 81 ~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~--------g~iv~isS 152 (252)
T 3f1l_A 81 QLAQRIAVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDA--------GSLVFTSS 152 (252)
T ss_dssp HHHHHHHHHCSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSS--------CEEEEECC
T ss_pred HHHHHHHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCCC--------CEEEEECC
Confidence 999999999999999999999854 568889999999999999999999999999999987653 89999999
Q ss_pred ccccccCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHH
Q 025672 157 TLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDI 236 (249)
Q Consensus 157 ~~~~~~~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv 236 (249)
..+..+.++...|++||+|+.+|+++++.|++ ++ |+||+|+||+++|++... .....+..++.+|+|+
T Consensus 153 ~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~-~~-irvn~v~PG~v~t~~~~~----------~~~~~~~~~~~~p~dv 220 (252)
T 3f1l_A 153 SVGRQGRANWGAYAASKFATEGMMQVLADEYQ-QR-LRVNCINPGGTRTAMRAS----------AFPTEDPQKLKTPADI 220 (252)
T ss_dssp GGGTSCCTTCHHHHHHHHHHHHHHHHHHHHTT-TT-CEEEEEECCSBSSHHHHH----------HCTTCCGGGSBCTGGG
T ss_pred hhhccCCCCCchhHHHHHHHHHHHHHHHHHhc-CC-cEEEEEecCcccCchhhh----------hCCccchhccCCHHHH
Confidence 99999999999999999999999999999997 66 999999999999864321 1112233568899999
Q ss_pred HHHHHHhccCCCC
Q 025672 237 AMAALYLASDAGQ 249 (249)
Q Consensus 237 a~~v~~l~s~~a~ 249 (249)
+++++||++++++
T Consensus 221 a~~~~~L~s~~~~ 233 (252)
T 3f1l_A 221 MPLYLWLMGDDSR 233 (252)
T ss_dssp HHHHHHHHSGGGT
T ss_pred HHHHHHHcCcccc
Confidence 9999999998753
|
| >1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=9e-47 Score=309.85 Aligned_cols=233 Identities=27% Similarity=0.410 Sum_probs=204.8
Q ss_pred CCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhc--CCCeeEEEccCCCHHHHHHHHHHHH
Q 025672 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVESTI 84 (249)
Q Consensus 7 ~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~ 84 (249)
.+++++|++|||||++|||++++++|+++|++|++++|+.++++++.+++... +.++.++.+|++|+++++++++++.
T Consensus 8 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~ 87 (267)
T 1iy8_A 8 TTRFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATT 87 (267)
T ss_dssp --CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred CccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHH
Confidence 34588999999999999999999999999999999999998888888888654 6689999999999999999999999
Q ss_pred HHhCCccEEEEcCCCCCC-CCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC
Q 025672 85 NHFGKLDILVNAAAGNFL-VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT 163 (249)
Q Consensus 85 ~~~~~id~vi~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~ 163 (249)
+.++++|+||||||.... .++.+.+.++|++.+++|+.++++++++++|.|.+++. |+||++||..+..+.
T Consensus 88 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~--------g~iv~isS~~~~~~~ 159 (267)
T 1iy8_A 88 ERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGS--------GMVVNTASVGGIRGI 159 (267)
T ss_dssp HHHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--------CEEEEECCGGGTSBC
T ss_pred HHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCC--------CEEEEEcchhhccCC
Confidence 999999999999998765 67788899999999999999999999999999987653 899999999999998
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCC------CChHHHHHhhhhhhcccCCCCHHHHH
Q 025672 164 WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK------LAPEEIRSKATDYMAAYKFGEKWDIA 237 (249)
Q Consensus 164 ~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~dva 237 (249)
++...|++||+++.+|+++++.|++ ++||+||+|+||+++|++.... ...+...+.+....|++|+++|+|+|
T Consensus 160 ~~~~~Y~asK~a~~~~~~~la~e~~-~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dvA 238 (267)
T 1iy8_A 160 GNQSGYAAAKHGVVGLTRNSAVEYG-RYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAPEIA 238 (267)
T ss_dssp SSBHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCTTCSCBCHHHHH
T ss_pred CCCccHHHHHHHHHHHHHHHHHHHH-hcCeEEEEEEeCCCcCcchhccccccChhhhhhHHHHHhccCCCCCCcCHHHHH
Confidence 9999999999999999999999998 8899999999999998764321 01111222455567889999999999
Q ss_pred HHHHHhccCCC
Q 025672 238 MAALYLASDAG 248 (249)
Q Consensus 238 ~~v~~l~s~~a 248 (249)
++++||+++++
T Consensus 239 ~~v~~l~s~~~ 249 (267)
T 1iy8_A 239 AVVAFLLSDDA 249 (267)
T ss_dssp HHHHHHTSGGG
T ss_pred HHHHHHcCccc
Confidence 99999999864
|
| >2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-46 Score=303.55 Aligned_cols=227 Identities=30% Similarity=0.356 Sum_probs=202.0
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhC
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 88 (249)
++++|++|||||++|||++++++|+++|++|++++|+.++++++.+++...+.++.++.+|++|+++++++++++.+.++
T Consensus 4 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g 83 (247)
T 2jah_A 4 ALQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEALG 83 (247)
T ss_dssp TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 47899999999999999999999999999999999999989988888877777899999999999999999999999999
Q ss_pred CccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchh
Q 025672 89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH 168 (249)
Q Consensus 89 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~ 168 (249)
++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|.+++ |+||++||..+..+.++...
T Consensus 84 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~---------g~iv~isS~~~~~~~~~~~~ 154 (247)
T 2jah_A 84 GLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK---------GTVVQMSSIAGRVNVRNAAV 154 (247)
T ss_dssp CCSEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT---------CEEEEECCGGGTCCCTTCHH
T ss_pred CCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC---------CEEEEEccHHhcCCCCCCcH
Confidence 999999999988778888999999999999999999999999999998652 78999999999999899999
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCC--CCHHHHHHHHHHhccC
Q 025672 169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKF--GEKWDIAMAALYLASD 246 (249)
Q Consensus 169 y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~dva~~v~~l~s~ 246 (249)
|++||+++.+|+++++.|++ ++||+||+|+||+++|++.... ..+...+.+ ...| +++ .+|||+|++++||+++
T Consensus 155 Y~asK~a~~~~~~~la~e~~-~~gi~v~~v~PG~v~T~~~~~~-~~~~~~~~~-~~~~-~~~~~~~pedvA~~v~~l~s~ 230 (247)
T 2jah_A 155 YQATKFGVNAFSETLRQEVT-ERGVRVVVIEPGTTDTELRGHI-THTATKEMY-EQRI-SQIRKLQAQDIAEAVRYAVTA 230 (247)
T ss_dssp HHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECSBSSSGGGGC-CCHHHHHHH-HHHT-TTSCCBCHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHHhc-ccCcEEEEEECCCCCCcchhcc-cchhhHHHH-Hhcc-cccCCCCHHHHHHHHHHHhCC
Confidence 99999999999999999998 8899999999999998764332 222222222 2234 566 8999999999999998
Q ss_pred CC
Q 025672 247 AG 248 (249)
Q Consensus 247 ~a 248 (249)
.+
T Consensus 231 ~~ 232 (247)
T 2jah_A 231 PH 232 (247)
T ss_dssp CT
T ss_pred Cc
Confidence 65
|
| >2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-47 Score=306.65 Aligned_cols=228 Identities=34% Similarity=0.460 Sum_probs=204.8
Q ss_pred CCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeC-CcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhC
Q 025672 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGR-RKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (249)
Q Consensus 10 l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r-~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 88 (249)
+++|++|||||++|||++++++|+++|++|++++| +.++++++.+++...+.++.++++|++|+++++++++++.+.++
T Consensus 2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 81 (246)
T 2uvd_A 2 LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVFG 81 (246)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 67899999999999999999999999999999999 78888888888877777899999999999999999999999999
Q ss_pred CccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchh
Q 025672 89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH 168 (249)
Q Consensus 89 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~ 168 (249)
++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|.+++. |+||++||..+..+.++...
T Consensus 82 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~--------g~iv~isS~~~~~~~~~~~~ 153 (246)
T 2uvd_A 82 QVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRH--------GRIVNIASVVGVTGNPGQAN 153 (246)
T ss_dssp CCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--------EEEEEECCTHHHHCCTTBHH
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCC--------cEEEEECCHHhcCCCCCCch
Confidence 9999999999887777888999999999999999999999999999987653 89999999999888888999
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhccCCC
Q 025672 169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAG 248 (249)
Q Consensus 169 y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~a 248 (249)
|++||+++.+|+++++.|++ ++||+||+|+||+++|++... .. +...+.+....|.+|+.+|+|+|++++||+++++
T Consensus 154 Y~asK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~-~~-~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~ 230 (246)
T 2uvd_A 154 YVAAKAGVIGLTKTSAKELA-SRNITVNAIAPGFIATDMTDV-LD-ENIKAEMLKLIPAAQFGEAQDIANAVTFFASDQS 230 (246)
T ss_dssp HHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBGGGCSSC-CC-TTHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHHHHHHHHHHHHHHHHhh-hcCeEEEEEEeccccCcchhh-cC-HHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchh
Confidence 99999999999999999998 889999999999999875433 22 2233344556788999999999999999999864
|
| >3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-46 Score=315.29 Aligned_cols=233 Identities=27% Similarity=0.403 Sum_probs=203.6
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCC------------cchHHHHHHHHHhcCCCeeEEEccCCCHHH
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR------------KTVLRSAVAALHSLGIPAIGLEGDVRKRED 75 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~------------~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~ 75 (249)
..+++|++|||||++|||+++|++|+++|++|++++|+ .+++++..+++...+.++.++++|++|+++
T Consensus 42 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~ 121 (317)
T 3oec_A 42 NRLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLAS 121 (317)
T ss_dssp CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHH
T ss_pred hccCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHH
Confidence 45889999999999999999999999999999999886 566777777777778899999999999999
Q ss_pred HHHHHHHHHHHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEec
Q 025672 76 AVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINIS 155 (249)
Q Consensus 76 ~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~is 155 (249)
++++++++.+.++++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|.+++. +|+||++|
T Consensus 122 v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~-------~g~Iv~is 194 (317)
T 3oec_A 122 LQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQ-------GGSVIFVS 194 (317)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCS-------CEEEEEEC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCC-------CCEEEEEC
Confidence 99999999999999999999999988888899999999999999999999999999999987642 48999999
Q ss_pred cccccccCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccC------------CCChHHHHHh--h
Q 025672 156 ATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVS------------KLAPEEIRSK--A 221 (249)
Q Consensus 156 s~~~~~~~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~------------~~~~~~~~~~--~ 221 (249)
|..+..+.++...|++||+|+.+|+++++.|++ ++||+||+|+||+|+|++... ....++..+. .
T Consensus 195 S~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~-~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (317)
T 3oec_A 195 STVGLRGAPGQSHYAASKHGVQGLMLSLANEVG-RHNIRVNSVNPGAVNTEMALNEKLLKMFLPHLENPTREDAAELFSQ 273 (317)
T ss_dssp CGGGSSCCTTBHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBSSHHHHCHHHHHHHCTTCSSCCHHHHHHHHTT
T ss_pred cHHhcCCCCCCcchHHHHHHHHHHHHHHHHHHh-hcCeEEEEEecCcccCccccchhhhhhhhhhccccchhHHHHHHhh
Confidence 999999999999999999999999999999998 889999999999999875421 1111222221 1
Q ss_pred hhhhcccCCCCHHHHHHHHHHhccCCCC
Q 025672 222 TDYMAAYKFGEKWDIAMAALYLASDAGQ 249 (249)
Q Consensus 222 ~~~~~~~~~~~~~dva~~v~~l~s~~a~ 249 (249)
....| +++.+|+|+|++++||+|++++
T Consensus 274 ~~~~p-~~~~~pedvA~av~fL~s~~a~ 300 (317)
T 3oec_A 274 LTLLP-IPWVEPEDVSNAVAWLASDEAR 300 (317)
T ss_dssp TCSSS-SSSBCHHHHHHHHHHHTSGGGT
T ss_pred hccCC-CCCCCHHHHHHHHHHHcCCccc
Confidence 22334 7889999999999999998763
|
| >3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-46 Score=307.97 Aligned_cols=232 Identities=26% Similarity=0.333 Sum_probs=205.8
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhc-CCCeeEEEccCCCHHHHHHHHHHHHHH
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL-GIPAIGLEGDVRKREDAVRVVESTINH 86 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 86 (249)
+++++|++|||||++|||++++++|+++|++|++++|+.++++++.+++... +.++.++++|++|+++++++++++.+.
T Consensus 3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 82 (263)
T 3ai3_A 3 MGISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSS 82 (263)
T ss_dssp CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 4578999999999999999999999999999999999998888888888654 678999999999999999999999999
Q ss_pred hCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccc
Q 025672 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ 166 (249)
Q Consensus 87 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~ 166 (249)
++++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|.+++. |+||++||..+..+.++.
T Consensus 83 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~--------g~iv~isS~~~~~~~~~~ 154 (263)
T 3ai3_A 83 FGGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGG--------GAIIHNASICAVQPLWYE 154 (263)
T ss_dssp HSSCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--------EEEEEECCGGGTSCCTTC
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCC--------cEEEEECchhhcCCCCCc
Confidence 999999999999887778888999999999999999999999999999987643 899999999999988889
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCC---------hHHHHHhhhhh-hcccCCCCHHHH
Q 025672 167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA---------PEEIRSKATDY-MAAYKFGEKWDI 236 (249)
Q Consensus 167 ~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~---------~~~~~~~~~~~-~~~~~~~~~~dv 236 (249)
..|++||+++++|+++++.|++ ++||+||+|+||+++|++...... .++..+.+... .|.+|+.+|+|+
T Consensus 155 ~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dv 233 (263)
T 3ai3_A 155 PIYNVTKAALMMFSKTLATEVI-KDNIRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEHAPIKRFASPEEL 233 (263)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECCBCCHHHHHHHHHHTTTTTCCHHHHHHHHHHHHCTTCSCBCHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHhh-hcCcEEEEEecCcccCcchhhhhHhhhcccCCcHHHHHHHHHhcCCCCCCCcCHHHH
Confidence 9999999999999999999998 889999999999999875432110 22333334444 788999999999
Q ss_pred HHHHHHhccCCC
Q 025672 237 AMAALYLASDAG 248 (249)
Q Consensus 237 a~~v~~l~s~~a 248 (249)
|++++||+++++
T Consensus 234 A~~~~~l~s~~~ 245 (263)
T 3ai3_A 234 ANFFVFLCSERA 245 (263)
T ss_dssp HHHHHHHTSTTC
T ss_pred HHHHHHHcCccc
Confidence 999999999865
|
| >3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-46 Score=306.71 Aligned_cols=234 Identities=23% Similarity=0.309 Sum_probs=207.7
Q ss_pred CCCCCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEe-CCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHH
Q 025672 4 PFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMG-RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVES 82 (249)
Q Consensus 4 ~~~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~-r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~ 82 (249)
+.+..+.++|++|||||++|||+++|++|+++|++|++++ |+.+..++..+++...+.++.++++|++|++++++++++
T Consensus 5 ~~~~~~~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~ 84 (256)
T 3ezl_A 5 HHHHMVMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDK 84 (256)
T ss_dssp --------CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHH
T ss_pred CCCCCCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHH
Confidence 3455668899999999999999999999999999999888 777778888888887788899999999999999999999
Q ss_pred HHHHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc
Q 025672 83 TINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 162 (249)
Q Consensus 83 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~ 162 (249)
+.+.++++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|.+++. |+||++||..+..+
T Consensus 85 ~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~--------g~iv~isS~~~~~~ 156 (256)
T 3ezl_A 85 VKAEVGEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGW--------GRIINISSVNGQKG 156 (256)
T ss_dssp HHHHTCCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--------EEEEEECCCCGGGS
T ss_pred HHHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC--------CEEEEEcchhhccC
Confidence 9999999999999999988888889999999999999999999999999999988754 89999999999999
Q ss_pred CccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHH
Q 025672 163 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALY 242 (249)
Q Consensus 163 ~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~ 242 (249)
.++...|++||+|+.+|+++++.|++ ++||+||+|+||+++|++... . .++..+.+....|.+|+.+|+|+|+++.|
T Consensus 157 ~~~~~~Y~asK~a~~~~~~~la~e~~-~~gi~v~~v~PG~v~t~~~~~-~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~ 233 (256)
T 3ezl_A 157 QFGQTNYSTAKAGIHGFTMSLAQEVA-TKGVTVNTVSPGYIGTDMVKA-I-RPDVLEKIVATIPVRRLGSPDEIGSIVAW 233 (256)
T ss_dssp CSCCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCCHHHHT-S-CHHHHHHHHHHSTTSSCBCHHHHHHHHHH
T ss_pred CCCCcccHHHHHHHHHHHHHHHHHHH-HhCCEEEEEEECcccCccccc-c-CHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence 99999999999999999999999998 889999999999999876543 2 34556667778899999999999999999
Q ss_pred hccCCC
Q 025672 243 LASDAG 248 (249)
Q Consensus 243 l~s~~a 248 (249)
|+++++
T Consensus 234 l~s~~~ 239 (256)
T 3ezl_A 234 LASEES 239 (256)
T ss_dssp HHSGGG
T ss_pred HhCCcc
Confidence 999865
|
| >1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-46 Score=307.93 Aligned_cols=230 Identities=29% Similarity=0.396 Sum_probs=198.9
Q ss_pred CCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcch-HHHHHHHHHhc-CCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTV-LRSAVAALHSL-GIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 10 l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~-~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
+++|++|||||++|||++++++|+++|++|++++|+.+. ++++.+++... +.++.++.+|++|+++++++++++.+.+
T Consensus 2 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 81 (260)
T 1x1t_A 2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM 81 (260)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence 679999999999999999999999999999999999887 88888877654 6689999999999999999999999999
Q ss_pred CCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch
Q 025672 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 167 (249)
Q Consensus 88 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~ 167 (249)
+++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|.+++. |+||++||..+..+.++..
T Consensus 82 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~--------g~iv~isS~~~~~~~~~~~ 153 (260)
T 1x1t_A 82 GRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGF--------GRIINIASAHGLVASANKS 153 (260)
T ss_dssp SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--------EEEEEECCGGGTSCCTTCH
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--------CEEEEECcHHhCcCCCCCc
Confidence 99999999999877777888899999999999999999999999999987653 8999999999999888999
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCC---------hHHHHHhh-hhhhcccCCCCHHHHH
Q 025672 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA---------PEEIRSKA-TDYMAAYKFGEKWDIA 237 (249)
Q Consensus 168 ~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~---------~~~~~~~~-~~~~~~~~~~~~~dva 237 (249)
.|++||+++++|+++++.|++ ++||+||+|+||+++|++...... .++..+.+ ....|.+|+.+|+|+|
T Consensus 154 ~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dva 232 (260)
T 1x1t_A 154 AYVAAKHGVVGFTKVTALETA-GQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLG 232 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT-TTTEEEEEEEECCBCC------------------------CHHHHCTTCCCBCHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHhc-cCCEEEEEEeecCccCchHHHhhhhhccccCCchHHHHHHHhhccCCCCCCcCHHHHH
Confidence 999999999999999999998 889999999999999876433211 01222333 4557889999999999
Q ss_pred HHHHHhccCCC
Q 025672 238 MAALYLASDAG 248 (249)
Q Consensus 238 ~~v~~l~s~~a 248 (249)
++++||+++++
T Consensus 233 ~~~~~l~s~~~ 243 (260)
T 1x1t_A 233 GTAVFLASDAA 243 (260)
T ss_dssp HHHHHHHSGGG
T ss_pred HHHHHHhChhh
Confidence 99999999864
|
| >3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-46 Score=309.30 Aligned_cols=224 Identities=21% Similarity=0.218 Sum_probs=197.5
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhC
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 88 (249)
.+.+|++|||||++|||++++++|+++|++|++++|+.++++++. ..++.++++|++|+++++++++++.+.+|
T Consensus 13 ~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~------~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 86 (266)
T 3p19_A 13 GSMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKALN------LPNTLCAQVDVTDKYTFDTAITRAEKIYG 86 (266)
T ss_dssp --CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTTC------CTTEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHhh------cCCceEEEecCCCHHHHHHHHHHHHHHCC
Confidence 467999999999999999999999999999999999977654321 23688999999999999999999999999
Q ss_pred CccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchh
Q 025672 89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH 168 (249)
Q Consensus 89 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~ 168 (249)
++|+||||||.....++.+.+.++|++.+++|+.|+++++++++|.|.+++. |+||++||..+..+.++...
T Consensus 87 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~--------g~IV~isS~~~~~~~~~~~~ 158 (266)
T 3p19_A 87 PADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNC--------GTIINISSIAGKKTFPDHAA 158 (266)
T ss_dssp SEEEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--------CEEEEECCGGGTSCCTTCHH
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC--------cEEEEEcChhhCCCCCCCch
Confidence 9999999999988888899999999999999999999999999999987653 89999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhh-hhhcccCCCCHHHHHHHHHHhccCC
Q 025672 169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKAT-DYMAAYKFGEKWDIAMAALYLASDA 247 (249)
Q Consensus 169 y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~dva~~v~~l~s~~ 247 (249)
|++||+|+.+|+++++.|++ ++||+||+|+||+|+|++....... ...+.+. ...|++|+++|+|+|++++||+++.
T Consensus 159 Y~asK~a~~~~~~~la~e~~-~~gi~vn~v~PG~v~T~~~~~~~~~-~~~~~~~~~~~~~~r~~~pedvA~av~~l~~~~ 236 (266)
T 3p19_A 159 YCGTKFAVHAISENVREEVA-ASNVRVMTIAPSAVKTELLSHTTSQ-QIKDGYDAWRVDMGGVLAADDVARAVLFAYQQP 236 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECSBSSSGGGGCSCH-HHHHHHHHHHHHTTCCBCHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHHHHHhc-ccCcEEEEEeeCccccchhhcccch-hhhHHHHhhcccccCCCCHHHHHHHHHHHHcCC
Confidence 99999999999999999998 8899999999999998765544333 3323222 2458899999999999999999876
Q ss_pred C
Q 025672 248 G 248 (249)
Q Consensus 248 a 248 (249)
.
T Consensus 237 ~ 237 (266)
T 3p19_A 237 Q 237 (266)
T ss_dssp T
T ss_pred C
Confidence 4
|
| >3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-46 Score=311.86 Aligned_cols=230 Identities=23% Similarity=0.203 Sum_probs=199.1
Q ss_pred CCCCCCcEEEEecCC--CchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHH
Q 025672 7 GDILKGKVALLTGGG--SGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTI 84 (249)
Q Consensus 7 ~~~l~~k~~lItGa~--~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 84 (249)
..++++|++|||||+ +|||+++|++|+++|++|++++|++...+.+.+.... ..++.+++||++|+++++++++++.
T Consensus 26 ~~~l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dv~d~~~v~~~~~~~~ 104 (293)
T 3grk_A 26 SGLLQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEE-LGAFVAGHCDVADAASIDAVFETLE 104 (293)
T ss_dssp -CTTTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHH-HTCEEEEECCTTCHHHHHHHHHHHH
T ss_pred cccCCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHh-cCCceEEECCCCCHHHHHHHHHHHH
Confidence 345899999999999 5599999999999999999999996544433333333 3468899999999999999999999
Q ss_pred HHhCCccEEEEcCCCCC----CCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccc
Q 025672 85 NHFGKLDILVNAAAGNF----LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY 160 (249)
Q Consensus 85 ~~~~~id~vi~~ag~~~----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~ 160 (249)
+.++++|+||||||+.. ..++.+.+.++|++.+++|+.++++++++++|.|.+ +|+||++||..+.
T Consensus 105 ~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~----------~g~Iv~isS~~~~ 174 (293)
T 3grk_A 105 KKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMAD----------GGSILTLTYYGAE 174 (293)
T ss_dssp HHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTT----------CEEEEEEECGGGT
T ss_pred HhcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccC----------CCEEEEEeehhhc
Confidence 99999999999999876 467788999999999999999999999999999965 2899999999999
Q ss_pred ccCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHH
Q 025672 161 TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAA 240 (249)
Q Consensus 161 ~~~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v 240 (249)
.+.++...|++||+|+.+|+++++.|++ ++||+||+|+||+|+|++.......+...+.+....|++|+++|+|+|+++
T Consensus 175 ~~~~~~~~Y~asKaa~~~l~~~la~e~~-~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v 253 (293)
T 3grk_A 175 KVMPNYNVMGVAKAALEASVKYLAVDLG-PQNIRVNAISAGPIKTLAASGIGDFRYILKWNEYNAPLRRTVTIDEVGDVG 253 (293)
T ss_dssp SBCTTTTHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECCCCC------CCHHHHHHHHHHHSTTSSCCCHHHHHHHH
T ss_pred cCCCchHHHHHHHHHHHHHHHHHHHHHh-HhCCEEEEEecCCCcchhhhcccchHHHHHHHHhcCCCCCCCCHHHHHHHH
Confidence 9999999999999999999999999998 889999999999999876555444566667778889999999999999999
Q ss_pred HHhccCCC
Q 025672 241 LYLASDAG 248 (249)
Q Consensus 241 ~~l~s~~a 248 (249)
+||+|+++
T Consensus 254 ~~L~s~~~ 261 (293)
T 3grk_A 254 LYFLSDLS 261 (293)
T ss_dssp HHHHSGGG
T ss_pred HHHcCccc
Confidence 99999865
|
| >1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-46 Score=310.60 Aligned_cols=234 Identities=20% Similarity=0.264 Sum_probs=203.9
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEe-CCcchHHHHHHHHH-hcCCCeeEEEccCCCHH-----------
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMG-RRKTVLRSAVAALH-SLGIPAIGLEGDVRKRE----------- 74 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~-r~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~----------- 74 (249)
+++++|++|||||++|||++++++|+++|++|++++ |+.+.++++.+++. ..+.++.++++|++|++
T Consensus 5 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 84 (291)
T 1e7w_A 5 TAPTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSA 84 (291)
T ss_dssp ---CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CC
T ss_pred cCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhcCCeeEEEEeecCCccccccccccccc
Confidence 457899999999999999999999999999999999 99988888888886 55678999999999999
Q ss_pred ------HHHHHHHHHHHHhCCccEEEEcCCCCCCCCCCCCC--------------HHHHHHHHhhhhHHHHHHHHHHHHH
Q 025672 75 ------DAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLS--------------PNGFRTVIEIDSVGTFIMCHEALKY 134 (249)
Q Consensus 75 ------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~--------------~~~~~~~~~~n~~~~~~l~~~~~~~ 134 (249)
+++++++++.+.++++|+||||||.....++.+.+ .++|++.+++|+.++++++++++|.
T Consensus 85 ~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~ 164 (291)
T 1e7w_A 85 PVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHR 164 (291)
T ss_dssp CBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred ccchHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 99999999999999999999999988777888888 8999999999999999999999999
Q ss_pred HHhcCCCCCCCCCCceEEEeccccccccCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCCh
Q 025672 135 LKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP 214 (249)
Q Consensus 135 ~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~ 214 (249)
|.+++.. .....|+||++||..+..+.++...|++||+++.+|+++++.|++ ++||+||+|+||+|+|++ . ..
T Consensus 165 m~~~~~~--~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~-~~gI~vn~v~PG~v~T~~-~--~~- 237 (291)
T 1e7w_A 165 VAGTPAK--HRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELA-PLQIRVNGVGPGLSVLVD-D--MP- 237 (291)
T ss_dssp HHTSCGG--GSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEESSBCCGG-G--SC-
T ss_pred HHhcCCC--CCCCCcEEEEEechhhcCCCCCCchhHHHHHHHHHHHHHHHHHHH-hcCeEEEEEeeCCccCCc-c--CC-
Confidence 9865410 000128999999999999999999999999999999999999998 889999999999999886 3 32
Q ss_pred HHHHHhhhhhhccc-CCCCHHHHHHHHHHhccCCC
Q 025672 215 EEIRSKATDYMAAY-KFGEKWDIAMAALYLASDAG 248 (249)
Q Consensus 215 ~~~~~~~~~~~~~~-~~~~~~dva~~v~~l~s~~a 248 (249)
++..+.+....|++ |+.+|+|+|++++||+++++
T Consensus 238 ~~~~~~~~~~~p~~~r~~~pedvA~~v~~l~s~~~ 272 (291)
T 1e7w_A 238 PAVWEGHRSKVPLYQRDSSAAEVSDVVIFLCSSKA 272 (291)
T ss_dssp HHHHHHHHTTCTTTTSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHHHHHHhhCCCCCCCCCHHHHHHHHHHHhCCcc
Confidence 44445566667888 99999999999999999865
|
| >3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-46 Score=310.01 Aligned_cols=230 Identities=26% Similarity=0.348 Sum_probs=197.2
Q ss_pred CCCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCC------------cchHHHHHHHHHhcCCCeeEEEccCCCH
Q 025672 6 KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR------------KTVLRSAVAALHSLGIPAIGLEGDVRKR 73 (249)
Q Consensus 6 ~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~------------~~~~~~~~~~~~~~~~~~~~~~~Dl~~~ 73 (249)
+..++++|++|||||++|||++++++|+++|++|++++|+ .+++++..+++...+.++.++++|++|+
T Consensus 7 ~~~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 86 (278)
T 3sx2_A 7 SEGPLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDR 86 (278)
T ss_dssp --CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCH
T ss_pred CCCCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCH
Confidence 3456899999999999999999999999999999999987 6667777777777788999999999999
Q ss_pred HHHHHHHHHHHHHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEE
Q 025672 74 EDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIIN 153 (249)
Q Consensus 74 ~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~ 153 (249)
++++++++++.+.++++|+||||||+..... +.++|++.+++|+.++++++++++|.|.+++. +|+||+
T Consensus 87 ~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~----~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~-------~g~iv~ 155 (278)
T 3sx2_A 87 ESLSAALQAGLDELGRLDIVVANAGIAPMSA----GDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGT-------GGSIVL 155 (278)
T ss_dssp HHHHHHHHHHHHHHCCCCEEEECCCCCCCSS----THHHHHHHHHHHTHHHHHHHHHHHHHHHHHCS-------CEEEEE
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCCCCCCC----CHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCC-------CcEEEE
Confidence 9999999999999999999999999865432 58899999999999999999999999987642 389999
Q ss_pred eccccccccC----ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHH---------h
Q 025672 154 ISATLHYTAT----WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRS---------K 220 (249)
Q Consensus 154 iss~~~~~~~----~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~---------~ 220 (249)
+||..+..+. ++...|++||+|+.+|+++++.|++ ++||+||+|+||+|+|++.......+.+.+ .
T Consensus 156 isS~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~-~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~ 234 (278)
T 3sx2_A 156 ISSSAGLAGVGSADPGSVGYVAAKHGVVGLMRVYANLLA-GQMIRVNSIHPSGVETPMINNEFTREWLAKMAAATDTPGA 234 (278)
T ss_dssp ECCGGGTSCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEESCBSSTTTSSHHHHHHHHHHHHHCC--CT
T ss_pred EccHHhcCCCccCCCCchHhHHHHHHHHHHHHHHHHHHh-ccCcEEEEEecCCccCccchhhhHHHHHhhccchhhhhhh
Confidence 9999988876 7788999999999999999999998 899999999999999886543322221111 1
Q ss_pred hhhhhcccCCCCHHHHHHHHHHhccCCC
Q 025672 221 ATDYMAAYKFGEKWDIAMAALYLASDAG 248 (249)
Q Consensus 221 ~~~~~~~~~~~~~~dva~~v~~l~s~~a 248 (249)
+....| +|+.+|+|+|++++||+|+++
T Consensus 235 ~~~~~p-~~~~~p~dvA~~v~~l~s~~~ 261 (278)
T 3sx2_A 235 MGNAMP-VEVLAPEDVANAVAWLVSDQA 261 (278)
T ss_dssp TSCSSS-CSSBCHHHHHHHHHHHTSGGG
T ss_pred hhhhcC-cCcCCHHHHHHHHHHHhCccc
Confidence 223345 788999999999999999875
|
| >3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-46 Score=305.07 Aligned_cols=221 Identities=21% Similarity=0.220 Sum_probs=192.3
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhc--C-CCeeEEEccCCCHHHHHHHHHHHH
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL--G-IPAIGLEGDVRKREDAVRVVESTI 84 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~--~-~~~~~~~~Dl~~~~~~~~~~~~~~ 84 (249)
+.+++|++|||||++|||++++++|+++|++|++++|+.++++++.+++... + .++.++++|++|+++++++++++.
T Consensus 3 ~~~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 82 (250)
T 3nyw_A 3 LEKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIH 82 (250)
T ss_dssp --CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHH
T ss_pred ccCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHH
Confidence 3578999999999999999999999999999999999999999998888654 3 678999999999999999999999
Q ss_pred HHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCc
Q 025672 85 NHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW 164 (249)
Q Consensus 85 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~ 164 (249)
+.++++|+||||||.....++ +.+.++|++.+++|+.++++++++++|.|.+++. |+||++||..+..+.+
T Consensus 83 ~~~g~iD~lvnnAg~~~~~~~-~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~--------g~iv~isS~~~~~~~~ 153 (250)
T 3nyw_A 83 QKYGAVDILVNAAAMFMDGSL-SEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKN--------GYIFNVASRAAKYGFA 153 (250)
T ss_dssp HHHCCEEEEEECCCCCCCCCC-SCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--------EEEEEECC-------C
T ss_pred HhcCCCCEEEECCCcCCCCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC--------eEEEEEccHHhcCCCC
Confidence 999999999999999877777 7788999999999999999999999999987653 8999999999998777
Q ss_pred cchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhc
Q 025672 165 YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLA 244 (249)
Q Consensus 165 ~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~ 244 (249)
+...|++||+|+.+|+++++.|++ ++||+||+|+||+|+|++.. ......+.+++.+|+|+|+++.||+
T Consensus 154 ~~~~Y~asKaa~~~l~~~la~e~~-~~gi~vn~v~PG~v~T~~~~----------~~~~~~~~~~~~~p~dva~~v~~l~ 222 (250)
T 3nyw_A 154 DGGIYGSTKFALLGLAESLYRELA-PLGIRVTTLCPGWVNTDMAK----------KAGTPFKDEEMIQPDDLLNTIRCLL 222 (250)
T ss_dssp CTTHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEESSBCSHHHH----------HTTCCSCGGGSBCHHHHHHHHHHHH
T ss_pred CCcchHHHHHHHHHHHHHHHHHhh-hcCcEEEEEecCcccCchhh----------hcCCCcccccCCCHHHHHHHHHHHH
Confidence 789999999999999999999998 88999999999999986432 2223356678999999999999999
Q ss_pred cCCC
Q 025672 245 SDAG 248 (249)
Q Consensus 245 s~~a 248 (249)
++.+
T Consensus 223 s~~~ 226 (250)
T 3nyw_A 223 NLSE 226 (250)
T ss_dssp TSCT
T ss_pred cCCC
Confidence 9765
|
| >2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-46 Score=306.01 Aligned_cols=234 Identities=26% Similarity=0.358 Sum_probs=206.4
Q ss_pred CCCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHH
Q 025672 6 KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN 85 (249)
Q Consensus 6 ~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 85 (249)
+...+++|++|||||++|||++++++|+++|++|++++|+.++++++.+++...+.++.++.+|++|+++++++++++.+
T Consensus 8 ~~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 87 (260)
T 2zat_A 8 RRKPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVN 87 (260)
T ss_dssp --CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred cccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHH
Confidence 34568899999999999999999999999999999999999888888888877777899999999999999999999999
Q ss_pred HhCCccEEEEcCCCCC-CCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCc
Q 025672 86 HFGKLDILVNAAAGNF-LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW 164 (249)
Q Consensus 86 ~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~ 164 (249)
.++++|+||||||... ..++.+.+.++|++.+++|+.++++++++++|.|.+++. ++||++||..+..+.+
T Consensus 88 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~--------g~iv~isS~~~~~~~~ 159 (260)
T 2zat_A 88 LHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGG--------GSVLIVSSVGAYHPFP 159 (260)
T ss_dssp HHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTC--------EEEEEECCGGGTSCCT
T ss_pred HcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCC--------CEEEEEechhhcCCCC
Confidence 9999999999999864 467778899999999999999999999999999987643 8999999999999989
Q ss_pred cchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhc
Q 025672 165 YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLA 244 (249)
Q Consensus 165 ~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~ 244 (249)
+...|+++|+++++|+++++.|++ ++||+||+|+||+++|++.......+.....+....|.+|+++|+|+|+++.||+
T Consensus 160 ~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~ 238 (260)
T 2zat_A 160 NLGPYNVSKTALLGLTKNLAVELA-PRNIRVNCLAPGLIKTNFSQVLWMDKARKEYMKESLRIRRLGNPEDCAGIVSFLC 238 (260)
T ss_dssp TBHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCSSTTHHHHSSHHHHHHHHHHHTCSSCBCGGGGHHHHHHHT
T ss_pred CchhHHHHHHHHHHHHHHHHHHhc-ccCeEEEEEEECcccCccchhcccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHc
Confidence 999999999999999999999998 8899999999999998754321122233334556678899999999999999999
Q ss_pred cCCC
Q 025672 245 SDAG 248 (249)
Q Consensus 245 s~~a 248 (249)
++++
T Consensus 239 s~~~ 242 (260)
T 2zat_A 239 SEDA 242 (260)
T ss_dssp SGGG
T ss_pred Cccc
Confidence 9864
|
| >3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-46 Score=306.82 Aligned_cols=234 Identities=29% Similarity=0.398 Sum_probs=193.5
Q ss_pred CCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHH
Q 025672 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (249)
Q Consensus 7 ~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 86 (249)
.+++++|++|||||++|||++++++|+++|++|++++|+.++++++.+++ +.++.++.+|++|+++++++++++.+.
T Consensus 4 ~m~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~ 80 (261)
T 3n74_A 4 SMSLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEI---GDAALAVAADISKEADVDAAVEAALSK 80 (261)
T ss_dssp -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CTTEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred cccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHh
Confidence 46789999999999999999999999999999999999999888887766 457999999999999999999999999
Q ss_pred hCCccEEEEcCCCCC-CCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCcc
Q 025672 87 FGKLDILVNAAAGNF-LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY 165 (249)
Q Consensus 87 ~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~ 165 (249)
++++|+||||||... ..++.+.+.++|++.+++|+.++++++++++|.|.++... ...++||++||..+..+.++
T Consensus 81 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~----~~~~~iv~isS~~~~~~~~~ 156 (261)
T 3n74_A 81 FGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAK----GQECVILNVASTGAGRPRPN 156 (261)
T ss_dssp HSCCCEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHT----TCCEEEEEECCTTTTSCCTT
T ss_pred cCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCC----CCCeEEEEeCchhhcCCCCC
Confidence 999999999999876 5677788999999999999999999999999999865311 11378999999999999999
Q ss_pred chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCC--ChHHHHHhhhhhhcccCCCCHHHHHHHHHHh
Q 025672 166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL--APEEIRSKATDYMAAYKFGEKWDIAMAALYL 243 (249)
Q Consensus 166 ~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l 243 (249)
...|+++|+|+++|+++++.|++ ++||+||+|+||+++|++..... ..++..+.+....|.+|+.+|+|+|++++||
T Consensus 157 ~~~Y~asKaa~~~~~~~la~e~~-~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l 235 (261)
T 3n74_A 157 LAWYNATKGWVVSVTKALAIELA-PAKIRVVALNPVAGETPLLTTFMGEDSEEIRKKFRDSIPMGRLLKPDDLAEAAAFL 235 (261)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEEC-------------------------CTTSSCCCHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHhh-hcCcEEEEEecCcccChhhhhhcccCcHHHHHHHhhcCCcCCCcCHHHHHHHHHHH
Confidence 99999999999999999999998 88999999999999987654432 2345556677788999999999999999999
Q ss_pred ccCCC
Q 025672 244 ASDAG 248 (249)
Q Consensus 244 ~s~~a 248 (249)
+++++
T Consensus 236 ~s~~~ 240 (261)
T 3n74_A 236 CSPQA 240 (261)
T ss_dssp TSGGG
T ss_pred cCCcc
Confidence 99865
|
| >4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-46 Score=308.70 Aligned_cols=233 Identities=26% Similarity=0.337 Sum_probs=204.4
Q ss_pred CCCCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCC-cchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHH
Q 025672 5 FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR-KTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVEST 83 (249)
Q Consensus 5 ~~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~-~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 83 (249)
.+.+++++|++|||||++|||++++++|+++|++|++++|+ .+..+.+.+++...+.++.++++|++|+++++++++++
T Consensus 22 ~~~m~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~ 101 (271)
T 4iin_A 22 SNAMQFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTI 101 (271)
T ss_dssp --CCCCSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred hhhcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHH
Confidence 55678999999999999999999999999999999999994 55567777888777889999999999999999999999
Q ss_pred HHHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC
Q 025672 84 INHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT 163 (249)
Q Consensus 84 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~ 163 (249)
.+.++++|+||||||.....++.+.+.++|++.+++|+.+++++++.++|.|.+++. |+||++||..+..+.
T Consensus 102 ~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~--------g~iv~isS~~~~~~~ 173 (271)
T 4iin_A 102 VQSDGGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRF--------GSVVNVASIIGERGN 173 (271)
T ss_dssp HHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--------EEEEEECCHHHHHCC
T ss_pred HHhcCCCCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCC--------CEEEEEechhhcCCC
Confidence 999999999999999988888888999999999999999999999999999988754 899999999999999
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHh
Q 025672 164 WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYL 243 (249)
Q Consensus 164 ~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l 243 (249)
++...|++||+|+.+|+++++.|++ ++||+||+|+||+++|++.... .++....+....|.+|+.+|+|+|+++.||
T Consensus 174 ~~~~~Y~asK~a~~~~~~~la~e~~-~~gi~v~~v~PG~v~T~~~~~~--~~~~~~~~~~~~~~~~~~~p~dvA~~i~~l 250 (271)
T 4iin_A 174 MGQTNYSASKGGMIAMSKSFAYEGA-LRNIRFNSVTPGFIETDMNANL--KDELKADYVKNIPLNRLGSAKEVAEAVAFL 250 (271)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHH-TTTEEEEEEEECSBCCC--------------CGGGCTTCSCBCHHHHHHHHHHH
T ss_pred CCchHhHHHHHHHHHHHHHHHHHHH-HhCcEEEEEEeCcccCCchhhh--cHHHHHHHHhcCCcCCCcCHHHHHHHHHHH
Confidence 9999999999999999999999998 8899999999999998754332 234455667778999999999999999999
Q ss_pred ccCCC
Q 025672 244 ASDAG 248 (249)
Q Consensus 244 ~s~~a 248 (249)
+++++
T Consensus 251 ~s~~~ 255 (271)
T 4iin_A 251 LSDHS 255 (271)
T ss_dssp HSGGG
T ss_pred hCCCc
Confidence 99865
|
| >3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-46 Score=305.44 Aligned_cols=233 Identities=27% Similarity=0.391 Sum_probs=201.6
Q ss_pred CCCCCCcEEEEecCC-CchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcC-CCeeEEEccCCCHHHHHHHHHHHH
Q 025672 7 GDILKGKVALLTGGG-SGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG-IPAIGLEGDVRKREDAVRVVESTI 84 (249)
Q Consensus 7 ~~~l~~k~~lItGa~-~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~ 84 (249)
.+.+++|++|||||+ +|||++++++|+++|++|++++|+.+++++..+++...+ .++.++++|++|+++++++++++.
T Consensus 17 ~~~l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~ 96 (266)
T 3o38_A 17 HGLLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTV 96 (266)
T ss_dssp CSTTTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred ccCCCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHH
Confidence 345899999999998 599999999999999999999999999999999886553 689999999999999999999999
Q ss_pred HHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCc
Q 025672 85 NHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW 164 (249)
Q Consensus 85 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~ 164 (249)
+.++++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|.++.. +++||++||..+..+.+
T Consensus 97 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-------~~~iv~~sS~~~~~~~~ 169 (266)
T 3o38_A 97 EKAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDH-------GGVIVNNASVLGWRAQH 169 (266)
T ss_dssp HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSC-------CEEEEEECCGGGTCCCT
T ss_pred HHhCCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC-------CeEEEEeCCHHHcCCCC
Confidence 99999999999999888788888999999999999999999999999999987632 48999999999999999
Q ss_pred cchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhc
Q 025672 165 YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLA 244 (249)
Q Consensus 165 ~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~ 244 (249)
+...|+++|+|+++|+++++.|++ ++||+||+|+||+++|++.... ..++..+.+....|.+|+.+|+|+|++++||+
T Consensus 170 ~~~~Y~~sKaa~~~~~~~la~e~~-~~gi~v~~v~PG~v~t~~~~~~-~~~~~~~~~~~~~~~~r~~~~~dva~~i~~l~ 247 (266)
T 3o38_A 170 SQSHYAAAKAGVMALTRCSAIEAV-EFGVRINAVSPSIARHKFLEKT-SSSELLDRLASDEAFGRAAEPWEVAATIAFLA 247 (266)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECCCCC------------------CCTTSSCCCHHHHHHHHHHHH
T ss_pred CCchHHHHHHHHHHHHHHHHHHHH-HcCcEEEEEeCCcccchhhhcc-CcHHHHHHHHhcCCcCCCCCHHHHHHHHHHHc
Confidence 999999999999999999999998 8899999999999998764433 33455566677788999999999999999999
Q ss_pred cCCC
Q 025672 245 SDAG 248 (249)
Q Consensus 245 s~~a 248 (249)
++++
T Consensus 248 s~~~ 251 (266)
T 3o38_A 248 SDYS 251 (266)
T ss_dssp SGGG
T ss_pred Cccc
Confidence 9864
|
| >3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-46 Score=311.46 Aligned_cols=225 Identities=22% Similarity=0.297 Sum_probs=200.7
Q ss_pred CCCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcc-------hHHHHHHHHHhcCCCeeEEEccCCCHHHHHH
Q 025672 6 KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT-------VLRSAVAALHSLGIPAIGLEGDVRKREDAVR 78 (249)
Q Consensus 6 ~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~-------~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~ 78 (249)
..|++++|++|||||++|||++++++|+++|++|++++|+.+ .+++..+++...+.++.+++||++|++++++
T Consensus 3 ~~m~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~ 82 (285)
T 3sc4_A 3 GSMSLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAA 82 (285)
T ss_dssp ---CCTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHH
T ss_pred CCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHH
Confidence 346789999999999999999999999999999999999977 5677788887778899999999999999999
Q ss_pred HHHHHHHHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccc
Q 025672 79 VVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL 158 (249)
Q Consensus 79 ~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~ 158 (249)
+++++.+.++++|++|||||+....++.+.+.++|++.+++|+.++++++++++|.|.+++. |+||++||..
T Consensus 83 ~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~--------g~iv~isS~~ 154 (285)
T 3sc4_A 83 AVAKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDN--------PHILTLSPPI 154 (285)
T ss_dssp HHHHHHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSS--------CEEEECCCCC
T ss_pred HHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCC--------cEEEEECChh
Confidence 99999999999999999999988888999999999999999999999999999999987653 8999999999
Q ss_pred ccccC-ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecC-ccccccccCCCChHHHHHhhhhhhcccCCCCHHHH
Q 025672 159 HYTAT-WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG-PIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDI 236 (249)
Q Consensus 159 ~~~~~-~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG-~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv 236 (249)
+..+. ++...|++||+|+.+|+++++.|++ ++||+||+|+|| ++.|++. ........+.+|+.+|||+
T Consensus 155 ~~~~~~~~~~~Y~asKaal~~~~~~la~e~~-~~gI~vn~v~PG~~v~t~~~---------~~~~~~~~~~~r~~~pedv 224 (285)
T 3sc4_A 155 RLEPKWLRPTPYMMAKYGMTLCALGIAEELR-DAGIASNTLWPRTTVATAAV---------QNLLGGDEAMARSRKPEVY 224 (285)
T ss_dssp CCSGGGSCSHHHHHHHHHHHHHHHHHHHHTG-GGTCEEEEEECSSCBCCHHH---------HHHHTSCCCCTTCBCTHHH
T ss_pred hccCCCCCCchHHHHHHHHHHHHHHHHHHhc-ccCcEEEEEeCCCccccHHH---------HhhccccccccCCCCHHHH
Confidence 88875 7789999999999999999999998 899999999999 5776432 2223344578899999999
Q ss_pred HHHHHHhccCCC
Q 025672 237 AMAALYLASDAG 248 (249)
Q Consensus 237 a~~v~~l~s~~a 248 (249)
|++++||+++.+
T Consensus 225 A~~~~~l~s~~~ 236 (285)
T 3sc4_A 225 ADAAYVVLNKPS 236 (285)
T ss_dssp HHHHHHHHTSCT
T ss_pred HHHHHHHhCCcc
Confidence 999999999874
|
| >4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-47 Score=312.51 Aligned_cols=233 Identities=26% Similarity=0.311 Sum_probs=195.9
Q ss_pred CCCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCC-CeeEEEccCCCHHHHHHHHHHHH
Q 025672 6 KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGI-PAIGLEGDVRKREDAVRVVESTI 84 (249)
Q Consensus 6 ~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~ 84 (249)
...++++|++|||||++|||+++|++|+++|++|++++|+.+.++++.+++...+. .+.++++|++|+++++++++++.
T Consensus 27 ~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 106 (281)
T 4dry_A 27 GKGSGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVR 106 (281)
T ss_dssp -------CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred cCCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence 34568899999999999999999999999999999999999999998888865544 45899999999999999999999
Q ss_pred HHhCCccEEEEcCCCCCC-CCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC
Q 025672 85 NHFGKLDILVNAAAGNFL-VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT 163 (249)
Q Consensus 85 ~~~~~id~vi~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~ 163 (249)
+.++++|+||||||.... .++.+.+.++|++.+++|+.++++++++++|.|.++... +|+||++||..+..+.
T Consensus 107 ~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~------~g~IV~isS~~~~~~~ 180 (281)
T 4dry_A 107 AEFARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPR------GGRIINNGSISAQTPR 180 (281)
T ss_dssp HHHSCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSC------CEEEEEECCGGGTCCC
T ss_pred HHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC------CcEEEEECCHHhCCCC
Confidence 999999999999998654 678889999999999999999999999999999876411 3899999999999999
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHh
Q 025672 164 WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYL 243 (249)
Q Consensus 164 ~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l 243 (249)
++...|++||+|+.+|+++++.|++ ++||+||+|+||+|+|++....... ........+.+|+.+|||+|++++||
T Consensus 181 ~~~~~Y~asKaa~~~l~~~la~e~~-~~gI~vn~v~PG~v~T~~~~~~~~~---~~~~~~~~~~~~~~~pedvA~~v~fL 256 (281)
T 4dry_A 181 PNSAPYTATKHAITGLTKSTALDGR-MHDIACGQIDIGNAATDMTARMSTG---VLQANGEVAAEPTIPIEHIAEAVVYM 256 (281)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEEECBCC-------CE---EECTTSCEEECCCBCHHHHHHHHHHH
T ss_pred CCChhHHHHHHHHHHHHHHHHHHhc-ccCeEEEEEEECcCcChhhhhhcch---hhhhhhcccccCCCCHHHHHHHHHHH
Confidence 9999999999999999999999998 8999999999999998764332111 01122345678899999999999999
Q ss_pred ccCCC
Q 025672 244 ASDAG 248 (249)
Q Consensus 244 ~s~~a 248 (249)
+|+..
T Consensus 257 ~s~~~ 261 (281)
T 4dry_A 257 ASLPL 261 (281)
T ss_dssp HHSCT
T ss_pred hCCCc
Confidence 98654
|
| >3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-47 Score=313.99 Aligned_cols=229 Identities=22% Similarity=0.282 Sum_probs=194.1
Q ss_pred CCCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCC---cchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHH
Q 025672 6 KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR---KTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVES 82 (249)
Q Consensus 6 ~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~---~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~ 82 (249)
..+++++|++|||||++|||+++|++|+++|++|++++|+ .+.++++.+++...+.++.++++|++|++++++++++
T Consensus 5 ~~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~ 84 (262)
T 3ksu_A 5 KYHDLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDF 84 (262)
T ss_dssp CCSCCTTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHH
T ss_pred cccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHH
Confidence 4567899999999999999999999999999999998764 4467778888877788899999999999999999999
Q ss_pred HHHHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc
Q 025672 83 TINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 162 (249)
Q Consensus 83 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~ 162 (249)
+.+.++++|++|||||+....++.+.+.++|++.+++|+.++++++++++|.|.+ +|+||++||..+..+
T Consensus 85 ~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~----------~g~iv~isS~~~~~~ 154 (262)
T 3ksu_A 85 AEKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNP----------NGHIITIATSLLAAY 154 (262)
T ss_dssp HHHHHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEE----------EEEEEEECCCHHHHH
T ss_pred HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcC----------CCEEEEEechhhccC
Confidence 9999999999999999988888889999999999999999999999999999843 288999999999988
Q ss_pred CccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHH
Q 025672 163 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALY 242 (249)
Q Consensus 163 ~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~ 242 (249)
.++...|++||+|+.+|+++++.|++ ++||+||+|+||+|+|++.... ..++..+.+....|.+|+.+|||+|++++|
T Consensus 155 ~~~~~~Y~asKaa~~~l~~~la~e~~-~~gi~vn~v~PG~v~T~~~~~~-~~~~~~~~~~~~~~~~r~~~pedvA~~v~~ 232 (262)
T 3ksu_A 155 TGFYSTYAGNKAPVEHYTRAASKELM-KQQISVNAIAPGPMDTSFFYGQ-ETKESTAFHKSQAMGNQLTKIEDIAPIIKF 232 (262)
T ss_dssp HCCCCC-----CHHHHHHHHHHHHTT-TTTCEEEEEEECCCCTHHHHTC-C------------CCCCSCCGGGTHHHHHH
T ss_pred CCCCchhHHHHHHHHHHHHHHHHHHH-HcCcEEEEEeeCCCcCcccccc-CchHHHHHHHhcCcccCCCCHHHHHHHHHH
Confidence 88899999999999999999999998 8899999999999998765443 233444556677889999999999999999
Q ss_pred hccC
Q 025672 243 LASD 246 (249)
Q Consensus 243 l~s~ 246 (249)
|+++
T Consensus 233 L~s~ 236 (262)
T 3ksu_A 233 LTTD 236 (262)
T ss_dssp HHTT
T ss_pred HcCC
Confidence 9998
|
| >3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-46 Score=306.51 Aligned_cols=229 Identities=22% Similarity=0.240 Sum_probs=203.5
Q ss_pred CcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcch--HHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCC
Q 025672 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTV--LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK 89 (249)
Q Consensus 12 ~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~--~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 89 (249)
+|++|||||++|||++++++|+++|++|++++|+.+. ++++.+++...+.++.++++|++|+++++++++++.+.+++
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 81 (258)
T 3a28_C 2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKLGG 81 (258)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHTC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 6899999999999999999999999999999999887 78888888776778999999999999999999999999999
Q ss_pred ccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhh
Q 025672 90 LDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHV 169 (249)
Q Consensus 90 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y 169 (249)
+|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|.+++. +|+||++||..+..+.++...|
T Consensus 82 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~-------~g~iv~isS~~~~~~~~~~~~Y 154 (258)
T 3a28_C 82 FDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGV-------KGKIINAASIAAIQGFPILSAY 154 (258)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC-------CCEEEEECCGGGTSCCTTCHHH
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCC-------CcEEEEECcchhccCCCCchhH
Confidence 999999999887778888999999999999999999999999999987541 2789999999999998999999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCC--------C-hHHHHHhhhhhhcccCCCCHHHHHHHH
Q 025672 170 SAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL--------A-PEEIRSKATDYMAAYKFGEKWDIAMAA 240 (249)
Q Consensus 170 ~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~--------~-~~~~~~~~~~~~~~~~~~~~~dva~~v 240 (249)
++||+++++|+++++.|++ ++||+||+|+||+++|++..... . .++..+.+....|++|+.+|+|+|+++
T Consensus 155 ~~sK~a~~~~~~~la~e~~-~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v 233 (258)
T 3a28_C 155 STTKFAVRGLTQAAAQELA-PKGHTVNAYAPGIVGTGMWEQIDAELSKINGKPIGENFKEYSSSIALGRPSVPEDVAGLV 233 (258)
T ss_dssp HHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECCBCSHHHHHHHHHHHHHHCCCTTHHHHHHHTTCTTSSCBCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH-hhCeEEEEEECCccCChhhhhhhhhhccccCCchHHHHHHHHhcCCCCCccCHHHHHHHH
Confidence 9999999999999999998 88999999999999987643211 1 123334455567889999999999999
Q ss_pred HHhccCCC
Q 025672 241 LYLASDAG 248 (249)
Q Consensus 241 ~~l~s~~a 248 (249)
+||+++++
T Consensus 234 ~~l~s~~~ 241 (258)
T 3a28_C 234 SFLASENS 241 (258)
T ss_dssp HHHHSGGG
T ss_pred HHHhCccc
Confidence 99999864
|
| >3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-46 Score=306.03 Aligned_cols=226 Identities=24% Similarity=0.298 Sum_probs=192.4
Q ss_pred CCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCC
Q 025672 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK 89 (249)
Q Consensus 10 l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 89 (249)
+++|++|||||++|||++++++|+++|++|++++|+.++++++.+++...+.++.++.+|++|+++++++++++.+.+|+
T Consensus 2 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 81 (264)
T 3tfo_A 2 VMDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWGR 81 (264)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 57899999999999999999999999999999999999999999999888888999999999999999999999999999
Q ss_pred ccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhh
Q 025672 90 LDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHV 169 (249)
Q Consensus 90 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y 169 (249)
+|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|.+++. |+||++||..+..+.++...|
T Consensus 82 iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~--------g~IV~isS~~~~~~~~~~~~Y 153 (264)
T 3tfo_A 82 IDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRS--------GQIINIGSIGALSVVPTAAVY 153 (264)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--------EEEEEECCGGGTCCCTTCHHH
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCC--------eEEEEEcCHHHcccCCCChhH
Confidence 999999999988888889999999999999999999999999999987653 899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhccCCCC
Q 025672 170 SAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGQ 249 (249)
Q Consensus 170 ~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~a~ 249 (249)
++||+|+.+|+++++.|+ + ||+||+|+||+|+|++...... +....... ....+..+|+|+|++++||+++.++
T Consensus 154 ~asKaal~~l~~~la~e~--~-gIrvn~v~PG~v~T~~~~~~~~-~~~~~~~~--~~~~~~~~pedvA~~v~~l~s~~~~ 227 (264)
T 3tfo_A 154 CATKFAVRAISDGLRQES--T-NIRVTCVNPGVVESELAGTITH-EETMAAMD--TYRAIALQPADIARAVRQVIEAPQS 227 (264)
T ss_dssp HHHHHHHHHHHHHHHHHC--S-SEEEEEEEECCC--------------------------CCCHHHHHHHHHHHHHSCTT
T ss_pred HHHHHHHHHHHHHHHHhC--C-CCEEEEEecCCCcCcccccccc-hhHHHHHH--hhhccCCCHHHHHHHHHHHhcCCcc
Confidence 999999999999999997 4 9999999999999876533221 11111111 1112357999999999999998753
|
| >3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-46 Score=306.94 Aligned_cols=231 Identities=22% Similarity=0.305 Sum_probs=186.5
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
+.+++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++ +.++.++++|++|+++++++++++.+.+
T Consensus 3 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 79 (257)
T 3tpc_A 3 MQLKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAEL---GAAVRFRNADVTNEADATAALAFAKQEF 79 (257)
T ss_dssp -CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC---------------CEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh---CCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence 4688999999999999999999999999999999999998888777766 4578999999999999999999999999
Q ss_pred CCccEEEEcCCCCCCCCC----CCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC
Q 025672 88 GKLDILVNAAAGNFLVPA----EDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT 163 (249)
Q Consensus 88 ~~id~vi~~ag~~~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~ 163 (249)
+++|++|||||.....++ .+.+.++|++.+++|+.++++++++++|.|.++.... ...+|+||++||..+..+.
T Consensus 80 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~--~~~~g~iv~isS~~~~~~~ 157 (257)
T 3tpc_A 80 GHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDA--DGERGVIVNTASIAAFDGQ 157 (257)
T ss_dssp SCCCEEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCT--TSCCEEEEEECCTHHHHCC
T ss_pred CCCCEEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccC--CCCCeEEEEEechhhccCC
Confidence 999999999998765443 2678899999999999999999999999998752110 1124899999999999999
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcc-cCCCCHHHHHHHHHH
Q 025672 164 WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAA-YKFGEKWDIAMAALY 242 (249)
Q Consensus 164 ~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~v~~ 242 (249)
++...|++||+|+.+|+++++.|++ ++||+||+|+||+|+|++.... +++..+.+....|. +|+++|+|+|+++.|
T Consensus 158 ~~~~~Y~asKaa~~~~~~~la~e~~-~~gi~vn~v~PG~v~t~~~~~~--~~~~~~~~~~~~p~~~r~~~~~dva~~v~~ 234 (257)
T 3tpc_A 158 IGQAAYAASKGGVAALTLPAARELA-RFGIRVVTIAPGIFDTPMMAGM--PQDVQDALAASVPFPPRLGRAEEYAALVKH 234 (257)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECCBSCC----------------CCSSSSCSCBCHHHHHHHHHH
T ss_pred CCCcchHHHHHHHHHHHHHHHHHHH-HcCeEEEEEEeCCCCChhhccC--CHHHHHHHHhcCCCCCCCCCHHHHHHHHHH
Confidence 9999999999999999999999998 8899999999999998765332 23445556677788 899999999999999
Q ss_pred hccC
Q 025672 243 LASD 246 (249)
Q Consensus 243 l~s~ 246 (249)
|+++
T Consensus 235 l~s~ 238 (257)
T 3tpc_A 235 ICEN 238 (257)
T ss_dssp HHHC
T ss_pred Hccc
Confidence 9986
|
| >3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-46 Score=308.24 Aligned_cols=222 Identities=25% Similarity=0.341 Sum_probs=196.3
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcch-------HHHHHHHHHhcCCCeeEEEccCCCHHHHHHHH
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTV-------LRSAVAALHSLGIPAIGLEGDVRKREDAVRVV 80 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~-------~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~ 80 (249)
+++++|++|||||++|||+++|++|+++|++|++++|+.++ +++..+++...+.++.++++|++|++++++++
T Consensus 2 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~ 81 (274)
T 3e03_A 2 LTLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAV 81 (274)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHH
T ss_pred CCCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHH
Confidence 56899999999999999999999999999999999998764 67777777777889999999999999999999
Q ss_pred HHHHHHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccc
Q 025672 81 ESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY 160 (249)
Q Consensus 81 ~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~ 160 (249)
+++.+.++++|++|||||.....++.+.+.++|++.+++|+.++++++++++|.|.+++. |+||++||..+.
T Consensus 82 ~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~--------g~iv~isS~~~~ 153 (274)
T 3e03_A 82 AATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPN--------PHILTLAPPPSL 153 (274)
T ss_dssp HHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSS--------CEEEECCCCCCC
T ss_pred HHHHHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCC--------ceEEEECChHhc
Confidence 999999999999999999988788888999999999999999999999999999987653 899999999988
Q ss_pred cc--CccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecC-ccccccccCCCChHHHHHhhhhhhcccCCCCHHHHH
Q 025672 161 TA--TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG-PIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIA 237 (249)
Q Consensus 161 ~~--~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG-~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva 237 (249)
.+ .++...|++||+|+.+|+++++.|++ ++||+||+|+|| +++|++. .. ....+..++.+|||+|
T Consensus 154 ~~~~~~~~~~Y~asKaal~~l~~~la~e~~-~~gI~vn~v~PG~~v~T~~~-~~----------~~~~~~~~~~~pedvA 221 (274)
T 3e03_A 154 NPAWWGAHTGYTLAKMGMSLVTLGLAAEFG-PQGVAINALWPRTVIATDAI-NM----------LPGVDAAACRRPEIMA 221 (274)
T ss_dssp CHHHHHHCHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEECSBCBCC------------------CCCGGGSBCTHHHH
T ss_pred CCCCCCCCchHHHHHHHHHHHHHHHHHHhh-hcCEEEEEEECCcccccchh-hh----------cccccccccCCHHHHH
Confidence 87 67788999999999999999999998 889999999999 5877643 11 1122445688999999
Q ss_pred HHHHHhccCCCC
Q 025672 238 MAALYLASDAGQ 249 (249)
Q Consensus 238 ~~v~~l~s~~a~ 249 (249)
++++||++++++
T Consensus 222 ~~v~~l~s~~~~ 233 (274)
T 3e03_A 222 DAAHAVLTREAA 233 (274)
T ss_dssp HHHHHHHTSCCT
T ss_pred HHHHHHhCcccc
Confidence 999999998763
|
| >3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-46 Score=306.00 Aligned_cols=232 Identities=24% Similarity=0.327 Sum_probs=203.2
Q ss_pred CCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEe-CCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHH
Q 025672 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMG-RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN 85 (249)
Q Consensus 7 ~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~-r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 85 (249)
..++++|++|||||++|||++++++|+++|++|++++ ++.+..+...+++...+.++.++.+|++|+++++++++++.+
T Consensus 20 ~~~~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 99 (269)
T 3gk3_A 20 GSMQAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLA 99 (269)
T ss_dssp ----CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred hhhhcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHH
Confidence 3457899999999999999999999999999999998 556666777777777778899999999999999999999999
Q ss_pred HhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCcc
Q 025672 86 HFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY 165 (249)
Q Consensus 86 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~ 165 (249)
.++++|+||||||.....++.+.+.++|+..+++|+.+++++++.++|.|.+++. |+||++||..+..+.++
T Consensus 100 ~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~--------g~iv~isS~~~~~~~~~ 171 (269)
T 3gk3_A 100 DFGKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRF--------GRIVNIGSVNGSRGAFG 171 (269)
T ss_dssp HHSCCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--------EEEEEECCHHHHHCCTT
T ss_pred HcCCCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC--------CEEEEeCChhhccCCCC
Confidence 9999999999999988888889999999999999999999999999999987653 89999999999999999
Q ss_pred chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhcc
Q 025672 166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245 (249)
Q Consensus 166 ~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s 245 (249)
...|++||+|+.+|+++++.|++ ++||+||+|+||+|+|++... ..++.....+....|.+|+.+|+|+|++++||++
T Consensus 172 ~~~Y~asKaa~~~~~~~la~e~~-~~gi~v~~v~PG~v~T~~~~~-~~~~~~~~~~~~~~~~~~~~~p~dvA~~v~~L~s 249 (269)
T 3gk3_A 172 QANYASAKAGIHGFTKTLALETA-KRGITVNTVSPGYLATAMVEA-VPQDVLEAKILPQIPVGRLGRPDEVAALIAFLCS 249 (269)
T ss_dssp BHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCCTTTTC--------CCSGGGCTTSSCBCHHHHHHHHHHHTS
T ss_pred cchHHHHHHHHHHHHHHHHHHhh-hcCCEEEEEecCcccchhhhh-hchhHHHHHhhhcCCcCCccCHHHHHHHHHHHhC
Confidence 99999999999999999999998 889999999999999876443 3233333356677889999999999999999999
Q ss_pred CCC
Q 025672 246 DAG 248 (249)
Q Consensus 246 ~~a 248 (249)
+++
T Consensus 250 ~~~ 252 (269)
T 3gk3_A 250 DDA 252 (269)
T ss_dssp TTC
T ss_pred CCc
Confidence 875
|
| >2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-46 Score=302.10 Aligned_cols=226 Identities=30% Similarity=0.399 Sum_probs=191.6
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCc-chHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK-TVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
.+++|++|||||++|||++++++|+++|++|++++|+. +++++ ++...+.++.++++|++|+++++++++++.+.+
T Consensus 4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~---~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 80 (249)
T 2ew8_A 4 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEA---AIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTF 80 (249)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHH---HHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHH---HHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHc
Confidence 47899999999999999999999999999999999998 65554 444456789999999999999999999999999
Q ss_pred CCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch
Q 025672 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 167 (249)
Q Consensus 88 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~ 167 (249)
+++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|.+++. |+||++||..+..+.++..
T Consensus 81 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~--------g~iv~isS~~~~~~~~~~~ 152 (249)
T 2ew8_A 81 GRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGW--------GRIINLTSTTYWLKIEAYT 152 (249)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--------EEEEEECCGGGGSCCSSCH
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCC--------eEEEEEcchhhccCCCCch
Confidence 99999999999887777888999999999999999999999999999987653 8999999999999989999
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCC-h-HHHHHhhhhhhcccCCCCHHHHHHHHHHhcc
Q 025672 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA-P-EEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245 (249)
Q Consensus 168 ~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s 245 (249)
.|++||+++.+|+++++.|++ ++||+||+|+||+++|++...... . ++..+.+. .|.+|+.+|+|+|++++||++
T Consensus 153 ~Y~asK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~--~~~~~~~~p~dva~~~~~l~s 229 (249)
T 2ew8_A 153 HYISTKAANIGFTRALASDLG-KDGITVNAIAPSLVRTATTEASALSAMFDVLPNML--QAIPRLQVPLDLTGAAAFLAS 229 (249)
T ss_dssp HHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECCC------------------CTT--SSSCSCCCTHHHHHHHHHHTS
T ss_pred hHHHHHHHHHHHHHHHHHHHH-hcCcEEEEEecCcCcCccchhccccchhhHHHHhh--CccCCCCCHHHHHHHHHHHcC
Confidence 999999999999999999998 889999999999999876431211 1 12222222 678899999999999999999
Q ss_pred CCC
Q 025672 246 DAG 248 (249)
Q Consensus 246 ~~a 248 (249)
+++
T Consensus 230 ~~~ 232 (249)
T 2ew8_A 230 DDA 232 (249)
T ss_dssp GGG
T ss_pred ccc
Confidence 864
|
| >3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-46 Score=308.70 Aligned_cols=229 Identities=24% Similarity=0.270 Sum_probs=200.0
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhc--CCCeeEEEccCCCHHHHHHHHHHHHH
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVESTIN 85 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~ 85 (249)
+.+++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++... +..+.++.+|++++++++++++
T Consensus 6 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~---- 81 (267)
T 3t4x_A 6 MQLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIE---- 81 (267)
T ss_dssp CCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHH----
T ss_pred cccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHH----
Confidence 5688999999999999999999999999999999999999999998888765 4567899999999999887764
Q ss_pred HhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCcc
Q 025672 86 HFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY 165 (249)
Q Consensus 86 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~ 165 (249)
+++++|++|||||.....++.+.+.++|++.+++|+.++++++++++|.|.+++. |+||++||..+..+.++
T Consensus 82 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~--------g~iv~isS~~~~~~~~~ 153 (267)
T 3t4x_A 82 KYPKVDILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKE--------GRVIFIASEAAIMPSQE 153 (267)
T ss_dssp HCCCCSEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTE--------EEEEEECCGGGTSCCTT
T ss_pred hcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCC--------CEEEEEcchhhccCCCc
Confidence 4789999999999988888889999999999999999999999999999987653 89999999999999999
Q ss_pred chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccC---------CCChHHHHHhh----hhhhcccCCCC
Q 025672 166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVS---------KLAPEEIRSKA----TDYMAAYKFGE 232 (249)
Q Consensus 166 ~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~---------~~~~~~~~~~~----~~~~~~~~~~~ 232 (249)
...|++||+|+.+|+++++.|++ ++||+||+|+||+++|++... ....++..+.+ ....|++|+++
T Consensus 154 ~~~Y~asKaa~~~l~~~la~e~~-~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 232 (267)
T 3t4x_A 154 MAHYSATKTMQLSLSRSLAELTT-GTNVTVNTIMPGSTLTEGVETMLNSLYPNEQLTIEEAEKRFMKENRPTSIIQRLIR 232 (267)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTT-TSEEEEEEEEECCBCCHHHHHHHHHSSTTSCCCHHHHHHHHHHHHCTTCSSCSCBC
T ss_pred chHHHHHHHHHHHHHHHHHHHhC-CCCeEEEEEeCCeecCccHHHHHhhcCcccCCCHHHHHHHHhhccCCcccccCccC
Confidence 99999999999999999999998 899999999999999874321 11222332222 23356899999
Q ss_pred HHHHHHHHHHhccCCCC
Q 025672 233 KWDIAMAALYLASDAGQ 249 (249)
Q Consensus 233 ~~dva~~v~~l~s~~a~ 249 (249)
|||+|++++||+|++++
T Consensus 233 pedvA~~v~fL~s~~~~ 249 (267)
T 3t4x_A 233 PEEIAHLVTFLSSPLSS 249 (267)
T ss_dssp THHHHHHHHHHHSGGGT
T ss_pred HHHHHHHHHHHcCcccc
Confidence 99999999999998753
|
| >1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-46 Score=304.76 Aligned_cols=229 Identities=28% Similarity=0.356 Sum_probs=203.6
Q ss_pred CcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCcc
Q 025672 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD 91 (249)
Q Consensus 12 ~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 91 (249)
+|++|||||++|||++++++|+++|++|++++|+.++++++.+++...+.++.++++|++|+++++++++++.+.++++|
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id 81 (256)
T 1geg_A 2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFD 81 (256)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCC
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence 68999999999999999999999999999999999888888888877677899999999999999999999999999999
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhhHH
Q 025672 92 ILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSA 171 (249)
Q Consensus 92 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~~ 171 (249)
+||||||.....++.+.+.++|++.+++|+.++++++++++|.|.+++. .|+||++||..+..+.++...|++
T Consensus 82 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~-------~g~iv~isS~~~~~~~~~~~~Y~a 154 (256)
T 1geg_A 82 VIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGH-------GGKIINACSQAGHVGNPELAVYSS 154 (256)
T ss_dssp EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTS-------CEEEEEECCGGGTSCCTTBHHHHH
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC-------CCEEEEECchhhcCCCCCchhHHH
Confidence 9999999877778888999999999999999999999999999987541 289999999999999889999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCC---------ChHHHHHhhhhhhcccCCCCHHHHHHHHHH
Q 025672 172 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL---------APEEIRSKATDYMAAYKFGEKWDIAMAALY 242 (249)
Q Consensus 172 sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~dva~~v~~ 242 (249)
||+++++|+++++.|++ ++||+||+|+||+++|++..... ..++..+.+....|.+|+.+|+|+|++++|
T Consensus 155 sK~a~~~~~~~la~e~~-~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~ 233 (256)
T 1geg_A 155 SKFAVRGLTQTAARDLA-PLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVSY 233 (256)
T ss_dssp HHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTCTTCSCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH-HcCeEEEEEEECCCccchhhhhhhhccccccCChHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence 99999999999999998 88999999999999987533210 012233345556788999999999999999
Q ss_pred hccCCC
Q 025672 243 LASDAG 248 (249)
Q Consensus 243 l~s~~a 248 (249)
|+++++
T Consensus 234 l~s~~~ 239 (256)
T 1geg_A 234 LASPDS 239 (256)
T ss_dssp HHSGGG
T ss_pred HhCccc
Confidence 999864
|
| >2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-46 Score=307.36 Aligned_cols=235 Identities=26% Similarity=0.337 Sum_probs=204.3
Q ss_pred CCCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHH
Q 025672 6 KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN 85 (249)
Q Consensus 6 ~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 85 (249)
+.+++++|++|||||++|||++++++|+++|++|++++|+.+.++++.+++...+ ++.++.+|++|+++++++++++.+
T Consensus 23 ~~~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~ 101 (276)
T 2b4q_A 23 PYFSLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYG-DCQAIPADLSSEAGARRLAQALGE 101 (276)
T ss_dssp TTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSS-CEEECCCCTTSHHHHHHHHHHHHH
T ss_pred cccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-ceEEEEeeCCCHHHHHHHHHHHHH
Confidence 3456899999999999999999999999999999999999988888888886555 789999999999999999999999
Q ss_pred HhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCcc
Q 025672 86 HFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY 165 (249)
Q Consensus 86 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~ 165 (249)
.++++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|.+++.. ...|+||++||..+..+.++
T Consensus 102 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~----~~~g~iV~isS~~~~~~~~~ 177 (276)
T 2b4q_A 102 LSARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASA----ENPARVINIGSVAGISAMGE 177 (276)
T ss_dssp HCSCCSEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCS----SSCEEEEEECCGGGTCCCCC
T ss_pred hcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCC----CCCCEEEEECCHHHcCCCCC
Confidence 99999999999998877788889999999999999999999999999999765421 01288999999999888888
Q ss_pred ch-hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhh--hhcccCCCCHHHHHHHHHH
Q 025672 166 QI-HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATD--YMAAYKFGEKWDIAMAALY 242 (249)
Q Consensus 166 ~~-~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~dva~~v~~ 242 (249)
.. .|++||+++++|+++++.|++ ++||+||+|+||+++|++..... . ...+.+.. ..|.+|+.+|+|+|++++|
T Consensus 178 ~~~~Y~asK~a~~~~~~~la~e~~-~~gI~vn~v~PG~v~T~~~~~~~-~-~~~~~~~~~~~~p~~r~~~p~dvA~~v~~ 254 (276)
T 2b4q_A 178 QAYAYGPSKAALHQLSRMLAKELV-GEHINVNVIAPGRFPSRMTRHIA-N-DPQALEADSASIPMGRWGRPEEMAALAIS 254 (276)
T ss_dssp SCTTHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECCCCSTTTHHHH-H-CHHHHHHHHHTSTTSSCCCHHHHHHHHHH
T ss_pred CccccHHHHHHHHHHHHHHHHHhc-ccCeEEEEEEeccCcCcchhhcc-h-hHHHHHHhhcCCCCCCcCCHHHHHHHHHH
Confidence 87 999999999999999999998 88999999999999987543211 1 12223334 6788999999999999999
Q ss_pred hccCCC
Q 025672 243 LASDAG 248 (249)
Q Consensus 243 l~s~~a 248 (249)
|+++++
T Consensus 255 l~s~~~ 260 (276)
T 2b4q_A 255 LAGTAG 260 (276)
T ss_dssp HHSGGG
T ss_pred HhCccc
Confidence 999864
|
| >4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-46 Score=307.08 Aligned_cols=228 Identities=25% Similarity=0.363 Sum_probs=186.6
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
..+++|++|||||++|||++++++|+++|++|++++|+.+.++++.+++. .++.++++|++|+++++++++++.+.+
T Consensus 24 ~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 100 (272)
T 4dyv_A 24 SKTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIG---DDALCVPTDVTDPDSVRALFTATVEKF 100 (272)
T ss_dssp ----CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHT---SCCEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhC---CCeEEEEecCCCHHHHHHHHHHHHHHc
Confidence 35789999999999999999999999999999999999988888887773 578999999999999999999999999
Q ss_pred CCccEEEEcCCCCCC-CCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccc
Q 025672 88 GKLDILVNAAAGNFL-VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ 166 (249)
Q Consensus 88 ~~id~vi~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~ 166 (249)
|++|+||||||.... .++.+.+.++|++.+++|+.++++++++++|.|.+++.. +|+||++||..+..+.++.
T Consensus 101 g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~------~g~IV~isS~~~~~~~~~~ 174 (272)
T 4dyv_A 101 GRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPR------GGRIINNGSISATSPRPYS 174 (272)
T ss_dssp SCCCEEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSC------CEEEEEECCSSTTSCCTTC
T ss_pred CCCCEEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCC------CcEEEEECchhhcCCCCCc
Confidence 999999999998654 678889999999999999999999999999999876421 3899999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhccC
Q 025672 167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246 (249)
Q Consensus 167 ~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~ 246 (249)
..|++||+|+.+|+++++.|++ ++||+||+|+||+|+|++...... .. .......+.+|+.+|+|+|++++||+|+
T Consensus 175 ~~Y~asKaa~~~l~~~la~e~~-~~gI~vn~v~PG~v~T~~~~~~~~--~~-~~~~~~~~~~~~~~pedvA~~v~fL~s~ 250 (272)
T 4dyv_A 175 APYTATKHAITGLTKSTSLDGR-VHDIACGQIDIGNADTPMAQKMKA--GV-PQADLSIKVEPVMDVAHVASAVVYMASL 250 (272)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEEEECC---------------------------CHHHHHHHHHHHHHS
T ss_pred hHHHHHHHHHHHHHHHHHHHhC-ccCEEEEEEEECcccChhhhhhcc--cc-hhhhhcccccCCCCHHHHHHHHHHHhCC
Confidence 9999999999999999999998 889999999999999876433221 11 1222346778899999999999999986
Q ss_pred CC
Q 025672 247 AG 248 (249)
Q Consensus 247 ~a 248 (249)
..
T Consensus 251 ~~ 252 (272)
T 4dyv_A 251 PL 252 (272)
T ss_dssp CT
T ss_pred CC
Confidence 43
|
| >3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-46 Score=300.06 Aligned_cols=214 Identities=20% Similarity=0.285 Sum_probs=184.4
Q ss_pred CCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCC
Q 025672 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK 89 (249)
Q Consensus 10 l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 89 (249)
|++|++|||||++|||++++++|+++|++|++++|+.++++++.+++.. ++.++.+|++|+++++++++++.+.+++
T Consensus 1 Ms~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 77 (235)
T 3l6e_A 1 MSLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLGN---AVIGIVADLAHHEDVDVAFAAAVEWGGL 77 (235)
T ss_dssp --CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGG---GEEEEECCTTSHHHHHHHHHHHHHHHCS
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcC---CceEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 3579999999999999999999999999999999999999888888743 5899999999999999999999999999
Q ss_pred ccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhh
Q 025672 90 LDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHV 169 (249)
Q Consensus 90 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y 169 (249)
+|++|||||.....++.+.+.++|++.+++|+.++++++++++|.|.+++ ++||++||..+..+.++...|
T Consensus 78 id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~---------~~iv~isS~~~~~~~~~~~~Y 148 (235)
T 3l6e_A 78 PELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERG---------GVLANVLSSAAQVGKANESLY 148 (235)
T ss_dssp CSEEEEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC---------EEEEEECCEECCSSCSSHHHH
T ss_pred CcEEEECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC---------CEEEEEeCHHhcCCCCCCcHH
Confidence 99999999998778888999999999999999999999999999997653 689999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhccCC
Q 025672 170 SAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247 (249)
Q Consensus 170 ~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~ 247 (249)
++||+|+.+|+++++.|++ ++||+||+|+||+|+|++...... .+..++.+|||+|++++||+++.
T Consensus 149 ~asKaa~~~~~~~la~e~~-~~gi~v~~v~PG~v~T~~~~~~~~-----------~~~~~~~~pedvA~~v~~l~~~~ 214 (235)
T 3l6e_A 149 CASKWGMRGFLESLRAELK-DSPLRLVNLYPSGIRSEFWDNTDH-----------VDPSGFMTPEDAAAYMLDALEAR 214 (235)
T ss_dssp HHHHHHHHHHHHHHHHHTT-TSSEEEEEEEEEEECCCC----------------------CBCHHHHHHHHHHHTCCC
T ss_pred HHHHHHHHHHHHHHHHHhh-ccCCEEEEEeCCCccCcchhccCC-----------CCCcCCCCHHHHHHHHHHHHhCC
Confidence 9999999999999999998 899999999999999875432211 23457899999999999999854
|
| >1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=9e-46 Score=300.26 Aligned_cols=223 Identities=30% Similarity=0.397 Sum_probs=198.1
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhC
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 88 (249)
++++|+++||||++|||++++++|+++|++|++++|+.++++++.+++ + +.++.+|++|+++++++++++.+.++
T Consensus 2 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~--~~~~~~D~~~~~~~~~~~~~~~~~~g 76 (245)
T 1uls_A 2 RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV---G--AHPVVMDVADPASVERGFAEALAHLG 76 (245)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT---T--CEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---C--CEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 478999999999999999999999999999999999987777665544 2 78899999999999999999999999
Q ss_pred CccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchh
Q 025672 89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH 168 (249)
Q Consensus 89 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~ 168 (249)
++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|.+++ .|+||++||.. ..+.++...
T Consensus 77 ~id~lvn~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~--------~g~iv~isS~~-~~~~~~~~~ 147 (245)
T 1uls_A 77 RLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKN--------PGSIVLTASRV-YLGNLGQAN 147 (245)
T ss_dssp SCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC--------CEEEEEECCGG-GGCCTTCHH
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC--------CCEEEEEccch-hcCCCCchh
Confidence 999999999988777788889999999999999999999999999998754 38999999998 778888899
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhccCCC
Q 025672 169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAG 248 (249)
Q Consensus 169 y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~a 248 (249)
|+++|+++.+|+++++.|++ ++||+||+|+||+++|++.. ... ++..+.+....|.+|+.+|+|+|++++||+++++
T Consensus 148 Y~asK~a~~~~~~~la~e~~-~~gi~v~~v~PG~v~t~~~~-~~~-~~~~~~~~~~~p~~~~~~~~dvA~~v~~l~s~~~ 224 (245)
T 1uls_A 148 YAASMAGVVGLTRTLALELG-RWGIRVNTLAPGFIETRMTA-KVP-EKVREKAIAATPLGRAGKPLEVAYAALFLLSDES 224 (245)
T ss_dssp HHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCCTTTS-SSC-HHHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHHHHHHHHHHHHHHHHHh-HhCeEEEEEEeCcCcCcchh-hcC-HHHHHHHHhhCCCCCCcCHHHHHHHHHHHhCchh
Confidence 99999999999999999998 88999999999999987643 232 3344445566788999999999999999999864
|
| >3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-46 Score=311.14 Aligned_cols=229 Identities=32% Similarity=0.451 Sum_probs=204.8
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcch-HHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHH
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTV-LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 86 (249)
.++++|++|||||++|||++++++|+++|++|++++|+.+. .+...+.+...+.++.++++|++|+++++++++++.+.
T Consensus 43 ~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 122 (291)
T 3ijr_A 43 EKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQ 122 (291)
T ss_dssp STTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 45899999999999999999999999999999999998764 45566666677888999999999999999999999999
Q ss_pred hCCccEEEEcCCCCC-CCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCcc
Q 025672 87 FGKLDILVNAAAGNF-LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY 165 (249)
Q Consensus 87 ~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~ 165 (249)
++++|+||||||... ..++.+.+.++|++.+++|+.++++++++++|.|.+ +|+||++||..+..+.++
T Consensus 123 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~----------~g~iv~isS~~~~~~~~~ 192 (291)
T 3ijr_A 123 LGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQ----------GDVIINTASIVAYEGNET 192 (291)
T ss_dssp HSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCT----------TCEEEEECCTHHHHCCTT
T ss_pred cCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhh----------CCEEEEEechHhcCCCCC
Confidence 999999999999865 457788899999999999999999999999998854 278999999999999999
Q ss_pred chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhcc
Q 025672 166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245 (249)
Q Consensus 166 ~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s 245 (249)
...|++||+|+++|+++++.|++ ++||+||+|+||+|+|++...... ++..+.+....|++|+++|+|+|++++||+|
T Consensus 193 ~~~Y~asKaa~~~l~~~la~e~~-~~gi~vn~v~PG~v~T~~~~~~~~-~~~~~~~~~~~p~~r~~~p~dvA~~v~~L~s 270 (291)
T 3ijr_A 193 LIDYSATKGAIVAFTRSLSQSLV-QKGIRVNGVAPGPIWTPLIPSSFD-EKKVSQFGSNVPMQRPGQPYELAPAYVYLAS 270 (291)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECSBCSTHHHHHSC-HHHHHHTTTTSTTSSCBCGGGTHHHHHHHHS
T ss_pred ChhHHHHHHHHHHHHHHHHHHHh-hcCEEEEEEeeCCCcCCcccccCC-HHHHHHHHccCCCCCCcCHHHHHHHHHHHhC
Confidence 99999999999999999999998 889999999999999876543333 3445566778899999999999999999999
Q ss_pred CCC
Q 025672 246 DAG 248 (249)
Q Consensus 246 ~~a 248 (249)
+++
T Consensus 271 ~~~ 273 (291)
T 3ijr_A 271 SDS 273 (291)
T ss_dssp GGG
T ss_pred Ccc
Confidence 875
|
| >3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-46 Score=307.01 Aligned_cols=225 Identities=27% Similarity=0.364 Sum_probs=197.4
Q ss_pred CCCCCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHH
Q 025672 4 PFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVEST 83 (249)
Q Consensus 4 ~~~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 83 (249)
+....++++|++|||||++|||++++++|+++|++|++++|+.+.. ...+.++++|++|+++++++++++
T Consensus 6 ~~~~~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~----------~~~~~~~~~Dv~~~~~v~~~~~~~ 75 (269)
T 3vtz_A 6 HHHMEEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSD----------VNVSDHFKIDVTNEEEVKEAVEKT 75 (269)
T ss_dssp ----CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--C----------TTSSEEEECCTTCHHHHHHHHHHH
T ss_pred cccccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhc----------cCceeEEEecCCCHHHHHHHHHHH
Confidence 3456678999999999999999999999999999999999987643 125778999999999999999999
Q ss_pred HHHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC
Q 025672 84 INHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT 163 (249)
Q Consensus 84 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~ 163 (249)
.+.++++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|.+++. |+||++||..+..+.
T Consensus 76 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~--------g~iv~isS~~~~~~~ 147 (269)
T 3vtz_A 76 TKKYGRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGH--------GSIINIASVQSYAAT 147 (269)
T ss_dssp HHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--------EEEEEECCGGGTSBC
T ss_pred HHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCC--------CEEEEECchhhccCC
Confidence 999999999999999988788888999999999999999999999999999987653 899999999999999
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCC---------ChHHHHHhhhhhhcccCCCCHH
Q 025672 164 WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL---------APEEIRSKATDYMAAYKFGEKW 234 (249)
Q Consensus 164 ~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~ 234 (249)
++...|++||+|+++|+++++.|++ + ||+||+|+||+|+|++..... ..++..+.+....|++|+++|+
T Consensus 148 ~~~~~Y~asKaa~~~l~~~la~e~~-~-~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pe 225 (269)
T 3vtz_A 148 KNAAAYVTSKHALLGLTRSVAIDYA-P-KIRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWGRQHPMGRIGRPE 225 (269)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHT-T-TEEEEEEEECSBCCHHHHHHHHHHHCCSTTHHHHHHHHHHHHSTTSSCBCHH
T ss_pred CCChhHHHHHHHHHHHHHHHHHHhc-C-CCEEEEEEECCCcCcchhhhhhccccccchhhHHHHHHHHhcCCCCCCcCHH
Confidence 9999999999999999999999998 7 899999999999987643211 0134555667788999999999
Q ss_pred HHHHHHHHhccCCC
Q 025672 235 DIAMAALYLASDAG 248 (249)
Q Consensus 235 dva~~v~~l~s~~a 248 (249)
|+|++++||+|+++
T Consensus 226 dvA~~v~~L~s~~~ 239 (269)
T 3vtz_A 226 EVAEVVAFLASDRS 239 (269)
T ss_dssp HHHHHHHHHHSGGG
T ss_pred HHHHHHHHHhCCcc
Confidence 99999999999875
|
| >2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-46 Score=303.20 Aligned_cols=231 Identities=23% Similarity=0.309 Sum_probs=199.7
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhc--CCCeeEEEccCCCHHHHHHHHHHHHH
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVESTIN 85 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~ 85 (249)
+++++|++|||||++|||++++++|+++|++|++++|+.++++++.+++... +.++.++.+|++|+++++++++++.+
T Consensus 3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 82 (260)
T 2z1n_A 3 LGIQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARD 82 (260)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence 4578999999999999999999999999999999999998888888887643 34789999999999999999999999
Q ss_pred HhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCcc
Q 025672 86 HFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY 165 (249)
Q Consensus 86 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~ 165 (249)
.++ +|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|.+++. |+||++||..+..+.++
T Consensus 83 ~~g-id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~--------g~iv~isS~~~~~~~~~ 153 (260)
T 2z1n_A 83 LGG-ADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGW--------GRMVYIGSVTLLRPWQD 153 (260)
T ss_dssp TTC-CSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTC--------EEEEEECCGGGTSCCTT
T ss_pred hcC-CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC--------cEEEEECchhhcCCCCC
Confidence 999 999999999877777888899999999999999999999999999987653 89999999999999889
Q ss_pred chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccC---------CCChHHHHHhhhhhhcccCCCCHHHH
Q 025672 166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVS---------KLAPEEIRSKATDYMAAYKFGEKWDI 236 (249)
Q Consensus 166 ~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~dv 236 (249)
...|++||+++.+|+++++.|++ ++||+||+|+||+++|++... ...++...+.+....|.+|+++|+|+
T Consensus 154 ~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dv 232 (260)
T 2z1n_A 154 LALSNIMRLPVIGVVRTLALELA-PHGVTVNAVLPSLILTDRVRSLAEERARRSGITVEEALKSMASRIPMGRVGKPEEL 232 (260)
T ss_dssp BHHHHHHTHHHHHHHHHHHHHHG-GGTEEEEEEEECHHHHCCCC-----------------------CCTTSSCCCHHHH
T ss_pred CchhHHHHHHHHHHHHHHHHHHh-hhCeEEEEEEECCcccchhhhhhhhhhcccCCcHHHHHHHHHhcCCCCCccCHHHH
Confidence 99999999999999999999998 889999999999999876541 11111113344556788999999999
Q ss_pred HHHHHHhccCCC
Q 025672 237 AMAALYLASDAG 248 (249)
Q Consensus 237 a~~v~~l~s~~a 248 (249)
|++++||+++++
T Consensus 233 a~~v~~l~s~~~ 244 (260)
T 2z1n_A 233 ASVVAFLASEKA 244 (260)
T ss_dssp HHHHHHHTSGGG
T ss_pred HHHHHHHhCccc
Confidence 999999999864
|
| >2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-46 Score=306.25 Aligned_cols=231 Identities=28% Similarity=0.389 Sum_probs=206.1
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhC
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 88 (249)
++++|++|||||++|||++++++|+++|++|++++|+.+.++++.+++...+.++.++.+|++|+++++++++++.+.++
T Consensus 19 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 98 (277)
T 2rhc_B 19 TQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYG 98 (277)
T ss_dssp CTTSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHhC
Confidence 57899999999999999999999999999999999999888888888877777899999999999999999999999999
Q ss_pred CccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHH--HHhcCCCCCCCCCCceEEEeccccccccCccc
Q 025672 89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKY--LKKGGRGQASSSSGGIIINISATLHYTATWYQ 166 (249)
Q Consensus 89 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~ 166 (249)
++|+||||||.....++.+.+.++|++.+++|+.++++++++++|. |.+++. |+||++||..+..+.++.
T Consensus 99 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~--------g~iv~isS~~~~~~~~~~ 170 (277)
T 2rhc_B 99 PVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGT--------GRIVNIASTGGKQGVVHA 170 (277)
T ss_dssp SCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTE--------EEEEEECCGGGTSCCTTC
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCC--------eEEEEECccccccCCCCC
Confidence 9999999999877777888999999999999999999999999998 876543 899999999999998899
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCC---------ChHHHHHhhhhhhcccCCCCHHHHH
Q 025672 167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL---------APEEIRSKATDYMAAYKFGEKWDIA 237 (249)
Q Consensus 167 ~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~dva 237 (249)
..|+++|+++.+|+++++.|++ ++||+||+|+||+++|++..... ..++..+.+....|.+|+.+|+|+|
T Consensus 171 ~~Y~asK~a~~~~~~~la~e~~-~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dvA 249 (277)
T 2rhc_B 171 APYSASKHGVVGFTKALGLELA-RTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVA 249 (277)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHT-TTEEEEEEEEECSBCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHSTTSSCBCHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHH-HhCcEEEEEecCcCcCchhhhhhhhcccccccchHHHHHHHHhcCCCCCCcCHHHHH
Confidence 9999999999999999999998 88999999999999987543211 0123334455667889999999999
Q ss_pred HHHHHhccCCC
Q 025672 238 MAALYLASDAG 248 (249)
Q Consensus 238 ~~v~~l~s~~a 248 (249)
++++||+++++
T Consensus 250 ~~v~~l~s~~~ 260 (277)
T 2rhc_B 250 EMVAYLIGPGA 260 (277)
T ss_dssp HHHHHHHSGGG
T ss_pred HHHHHHhCchh
Confidence 99999999864
|
| >3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-46 Score=303.36 Aligned_cols=230 Identities=28% Similarity=0.409 Sum_probs=175.5
Q ss_pred CCCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHH
Q 025672 6 KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN 85 (249)
Q Consensus 6 ~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 85 (249)
..+.+++|++|||||++|||++++++|+++|++|++++|+.+.++++.+++...+.++.++.+|++|+++++++++++.+
T Consensus 3 ~~~~~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 82 (253)
T 3qiv_A 3 GSMRFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLA 82 (253)
T ss_dssp --CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred cccccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 35678999999999999999999999999999999999999999999999988888899999999999999999999999
Q ss_pred HhCCccEEEEcCCCC---CCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc
Q 025672 86 HFGKLDILVNAAAGN---FLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 162 (249)
Q Consensus 86 ~~~~id~vi~~ag~~---~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~ 162 (249)
.++++|+||||||.. ...++.+.+.++|++.+++|+.++++++++++|.|.+++. |+||++||..++
T Consensus 83 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~--------g~iv~isS~~~~-- 152 (253)
T 3qiv_A 83 EFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRGG--------GAIVNQSSTAAW-- 152 (253)
T ss_dssp HHSCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC--------EEEEEECC------
T ss_pred HcCCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCC--------CEEEEECCcccc--
Confidence 999999999999984 3456778899999999999999999999999999987653 899999999876
Q ss_pred CccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHH
Q 025672 163 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALY 242 (249)
Q Consensus 163 ~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~ 242 (249)
++...|++||+++++|+++++.|++ ++||+||+|+||+++|++... ..+++..+.+....|.+|+.+|+|+|+++.|
T Consensus 153 -~~~~~Y~asK~a~~~~~~~la~e~~-~~gi~v~~v~PG~v~t~~~~~-~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~ 229 (253)
T 3qiv_A 153 -LYSNYYGLAKVGINGLTQQLSRELG-GRNIRINAIAPGPIDTEANRT-TTPKEMVDDIVKGLPLSRMGTPDDLVGMCLF 229 (253)
T ss_dssp --------CCHHHHHHHHHHHHHHTT-TTTEEEEEEEC--------------------------------CCHHHHHHHH
T ss_pred -CCCchhHHHHHHHHHHHHHHHHHHh-hcCeEEEEEEecCCcccchhh-cCcHHHHHHHhccCCCCCCCCHHHHHHHHHH
Confidence 4567799999999999999999998 889999999999999875443 3344566667778899999999999999999
Q ss_pred hccCCC
Q 025672 243 LASDAG 248 (249)
Q Consensus 243 l~s~~a 248 (249)
|+++++
T Consensus 230 l~s~~~ 235 (253)
T 3qiv_A 230 LLSDEA 235 (253)
T ss_dssp HHSGGG
T ss_pred HcCccc
Confidence 998764
|
| >3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-46 Score=308.70 Aligned_cols=228 Identities=21% Similarity=0.225 Sum_probs=200.6
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCC---eEEEEeCCcchHHHHHHHHHhc--CCCeeEEEccCCCHHHHHHHHHHH
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGA---AIAIMGRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVEST 83 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~---~v~l~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~ 83 (249)
.+++|++|||||++|||+++|++|+++|+ +|++++|+.+.++++.+++... +.++.+++||++|+++++++++++
T Consensus 30 ~l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~ 109 (287)
T 3rku_A 30 RLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENL 109 (287)
T ss_dssp HHTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTS
T ss_pred hcCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHH
Confidence 47899999999999999999999999998 9999999999999999988754 567899999999999999999999
Q ss_pred HHHhCCccEEEEcCCCCC-CCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc
Q 025672 84 INHFGKLDILVNAAAGNF-LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 162 (249)
Q Consensus 84 ~~~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~ 162 (249)
.+.++++|+||||||... ..++.+.+.++|++.+++|+.|+++++++++|.|.+++. |+||++||..+..+
T Consensus 110 ~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~--------g~IV~isS~~~~~~ 181 (287)
T 3rku_A 110 PQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNS--------GDIVNLGSIAGRDA 181 (287)
T ss_dssp CGGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--------CEEEEECCGGGTSC
T ss_pred HHhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--------CeEEEECChhhcCC
Confidence 999999999999999875 577889999999999999999999999999999987653 89999999999999
Q ss_pred CccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCC--ChHHHHHhhhhhhcccCCCCHHHHHHHH
Q 025672 163 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL--APEEIRSKATDYMAAYKFGEKWDIAMAA 240 (249)
Q Consensus 163 ~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~dva~~v 240 (249)
.++...|++||+|+.+|+++++.|++ ++||+||+|+||+|+|++..... .++...+.+.. ....+|||+|+++
T Consensus 182 ~~~~~~Y~asKaa~~~l~~~la~e~~-~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~----~~p~~pedvA~~v 256 (287)
T 3rku_A 182 YPTGSIYCASKFAVGAFTDSLRKELI-NTKIRVILIAPGLVETEFSLVRYRGNEEQAKNVYKD----TTPLMADDVADLI 256 (287)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHHHTT-TSSCEEEEEEESCEESSHHHHHTTTCHHHHHHHHTT----SCCEEHHHHHHHH
T ss_pred CCCCchHHHHHHHHHHHHHHHHHHhh-hcCCEEEEEeCCcCcCccccccccCcHHHHHHhhcc----cCCCCHHHHHHHH
Confidence 99999999999999999999999998 89999999999999987643221 12222222222 2344899999999
Q ss_pred HHhccCCCC
Q 025672 241 LYLASDAGQ 249 (249)
Q Consensus 241 ~~l~s~~a~ 249 (249)
+||+|+.++
T Consensus 257 ~~l~s~~~~ 265 (287)
T 3rku_A 257 VYATSRKQN 265 (287)
T ss_dssp HHHHTSCTT
T ss_pred HHHhCCCCC
Confidence 999998763
|
| >3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-45 Score=302.14 Aligned_cols=230 Identities=20% Similarity=0.191 Sum_probs=206.2
Q ss_pred CCCCCcEEEEecCC--CchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCC-CeeEEEccCCCHHHHHHHHHHHH
Q 025672 8 DILKGKVALLTGGG--SGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGI-PAIGLEGDVRKREDAVRVVESTI 84 (249)
Q Consensus 8 ~~l~~k~~lItGa~--~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~ 84 (249)
+++++|++|||||+ +|||+++|++|+++|++|++++|+....+.+.+.....+. ++.++.+|++|+++++++++++.
T Consensus 3 ~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~ 82 (266)
T 3oig_A 3 FSLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIK 82 (266)
T ss_dssp SCCTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHH
T ss_pred cccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHH
Confidence 46789999999999 6799999999999999999999997665665555555544 79999999999999999999999
Q ss_pred HHhCCccEEEEcCCCCC----CCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccc
Q 025672 85 NHFGKLDILVNAAAGNF----LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY 160 (249)
Q Consensus 85 ~~~~~id~vi~~ag~~~----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~ 160 (249)
+.++++|++|||||... ..++.+.+.++|+..+++|+.++++++++++|.|.+ +|+||++||..+.
T Consensus 83 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~----------~g~iv~isS~~~~ 152 (266)
T 3oig_A 83 EQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTE----------GGSIVTLTYLGGE 152 (266)
T ss_dssp HHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTT----------CEEEEEEECGGGT
T ss_pred HHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCC----------CceEEEEeccccc
Confidence 99999999999999876 467778899999999999999999999999998864 2899999999999
Q ss_pred ccCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHH
Q 025672 161 TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAA 240 (249)
Q Consensus 161 ~~~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v 240 (249)
.+.++...|++||+|+.+|+++++.|++ ++||+||+|+||+|+|++.......++..+.+....|.+|+.+|+|+|+++
T Consensus 153 ~~~~~~~~Y~asKaa~~~~~~~la~e~~-~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~p~dva~~v 231 (266)
T 3oig_A 153 LVMPNYNVMGVAKASLDASVKYLAADLG-KENIRVNSISAGPIRTLSAKGISDFNSILKDIEERAPLRRTTTPEEVGDTA 231 (266)
T ss_dssp SCCTTTHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECCCCSGGGTTCTTHHHHHHHHHHHSTTSSCCCHHHHHHHH
T ss_pred ccCCCcchhHHHHHHHHHHHHHHHHHHh-hcCcEEEEEecCcccccccccccchHHHHHHHHhcCCCCCCCCHHHHHHHH
Confidence 9999999999999999999999999998 889999999999999877665555566677788889999999999999999
Q ss_pred HHhccCCC
Q 025672 241 LYLASDAG 248 (249)
Q Consensus 241 ~~l~s~~a 248 (249)
+||+++++
T Consensus 232 ~~l~s~~~ 239 (266)
T 3oig_A 232 AFLFSDMS 239 (266)
T ss_dssp HHHHSGGG
T ss_pred HHHcCCch
Confidence 99999864
|
| >3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-45 Score=305.66 Aligned_cols=227 Identities=25% Similarity=0.327 Sum_probs=195.4
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
|++++|++|||||++|||++++++|+++|++|++++|+.+.++++.+++ +.++.++.+|++|+++++++++++.+.+
T Consensus 1 M~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 77 (281)
T 3zv4_A 1 MKLTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAH---GGNAVGVVGDVRSLQDQKRAAERCLAAF 77 (281)
T ss_dssp CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT---BTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCcCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHc---CCcEEEEEcCCCCHHHHHHHHHHHHHhc
Confidence 3578999999999999999999999999999999999988877766554 5689999999999999999999999999
Q ss_pred CCccEEEEcCCCCCC-CCC----CCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc
Q 025672 88 GKLDILVNAAAGNFL-VPA----EDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 162 (249)
Q Consensus 88 ~~id~vi~~ag~~~~-~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~ 162 (249)
+++|++|||||+... .++ .+.+.++|++.+++|+.++++++++++|.|.++. |+||++||..+..+
T Consensus 78 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~---------g~iv~isS~~~~~~ 148 (281)
T 3zv4_A 78 GKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSR---------GSVVFTISNAGFYP 148 (281)
T ss_dssp SCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT---------CEEEEECCGGGTSS
T ss_pred CCCCEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC---------CeEEEEecchhccC
Confidence 999999999998643 222 2445678999999999999999999999997752 88999999999999
Q ss_pred CccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCC--------hHHHHHhhhhhhcccCCCCHH
Q 025672 163 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA--------PEEIRSKATDYMAAYKFGEKW 234 (249)
Q Consensus 163 ~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~ 234 (249)
.++...|++||+|+.+|+++++.|++ ++ |+||+|+||+|+|++...... .....+.+....|++|+++|+
T Consensus 149 ~~~~~~Y~asKaa~~~l~~~la~e~~-~~-Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pe 226 (281)
T 3zv4_A 149 NGGGPLYTATKHAVVGLVRQMAFELA-PH-VRVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKSVLPIGRMPALE 226 (281)
T ss_dssp SSSCHHHHHHHHHHHHHHHHHHHHHT-TT-SEEEEEEECSSCC--CCCTTCC--------CCHHHHHHHTCTTSSCCCGG
T ss_pred CCCCchhHHHHHHHHHHHHHHHHHhc-CC-CEEEEEECCcCcCCcccccccccccccccchhHHHHHHhcCCCCCCCCHH
Confidence 99999999999999999999999998 76 999999999999886532111 112345567788999999999
Q ss_pred HHHHHHHHhcc-CCC
Q 025672 235 DIAMAALYLAS-DAG 248 (249)
Q Consensus 235 dva~~v~~l~s-~~a 248 (249)
|+|++++||+| +++
T Consensus 227 dvA~~v~fL~s~~~~ 241 (281)
T 3zv4_A 227 EYTGAYVFFATRGDS 241 (281)
T ss_dssp GGSHHHHHHHSTTTS
T ss_pred HHHHHHHHhhccccc
Confidence 99999999999 554
|
| >3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-46 Score=309.92 Aligned_cols=232 Identities=30% Similarity=0.332 Sum_probs=198.0
Q ss_pred CCCCCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCC------------cchHHHHHHHHHhcCCCeeEEEccCC
Q 025672 4 PFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR------------KTVLRSAVAALHSLGIPAIGLEGDVR 71 (249)
Q Consensus 4 ~~~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~------------~~~~~~~~~~~~~~~~~~~~~~~Dl~ 71 (249)
|.+.+++++|++|||||++|||+++|++|+++|++|++++|+ .+.+++...++...+.++.++++|++
T Consensus 2 p~~m~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 81 (287)
T 3pxx_A 2 PGSMGRVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVR 81 (287)
T ss_dssp TTSCCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTT
T ss_pred CCcccccCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCC
Confidence 555667999999999999999999999999999999999997 66677777788777889999999999
Q ss_pred CHHHHHHHHHHHHHHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceE
Q 025672 72 KREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGII 151 (249)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~i 151 (249)
|+++++++++++.+.++++|+||||||+.... .+.+.++|++.+++|+.++++++++++|.|.+ +|+|
T Consensus 82 ~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~--~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~----------~g~i 149 (287)
T 3pxx_A 82 DRAAVSRELANAVAEFGKLDVVVANAGICPLG--AHLPVQAFADAFDVDFVGVINTVHAALPYLTS----------GASI 149 (287)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCC--TTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCT----------TCEE
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCcCccc--CcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhc----------CcEE
Confidence 99999999999999999999999999987654 33788999999999999999999999999833 3889
Q ss_pred EEeccccccccC-----------ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCC--------
Q 025672 152 INISATLHYTAT-----------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL-------- 212 (249)
Q Consensus 152 v~iss~~~~~~~-----------~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~-------- 212 (249)
|++||..+..+. ++...|++||+++.+|+++++.|++ ++||+||+|+||+|+|++.....
T Consensus 150 v~isS~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~-~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~ 228 (287)
T 3pxx_A 150 ITTGSVAGLIAAAQPPGAGGPQGPGGAGYSYAKQLVDSYTLQLAAQLA-PQSIRANVIHPTNVNTDMLNSAPMYRQFRPD 228 (287)
T ss_dssp EEECCHHHHHHHHCCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEESSBSSTTTSSHHHHHHHCTT
T ss_pred EEeccchhcccccccccccccCCCccchHHHHHHHHHHHHHHHHHHHh-hcCcEEEEEecCccccccccccchhhhhccc
Confidence 999999887665 6778999999999999999999998 88999999999999988654211
Q ss_pred ----ChHHHHH--hhhhhhcccCCCCHHHHHHHHHHhccCCCC
Q 025672 213 ----APEEIRS--KATDYMAAYKFGEKWDIAMAALYLASDAGQ 249 (249)
Q Consensus 213 ----~~~~~~~--~~~~~~~~~~~~~~~dva~~v~~l~s~~a~ 249 (249)
...+... ......| +|+++|+|+|++++||+|++++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~-~~~~~p~dva~~v~fL~s~~a~ 270 (287)
T 3pxx_A 229 LEAPSRADALLAFPAMQAMP-TPYVEASDISNAVCFLASDESR 270 (287)
T ss_dssp SSSCCHHHHHHHGGGGCSSS-CSCBCHHHHHHHHHHHHSGGGT
T ss_pred cccchhHHHHhhhhhhcccC-CCCCCHHHHHhhHheecchhhc
Confidence 0111111 1233344 7899999999999999998753
|
| >3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-45 Score=300.73 Aligned_cols=223 Identities=26% Similarity=0.320 Sum_probs=194.8
Q ss_pred CCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHH
Q 025672 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (249)
Q Consensus 7 ~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 86 (249)
...+++|++|||||++|||++++++|+++|++|++++|+.+.++++.+++...+.++.++.+|++|+++++++++++.+.
T Consensus 24 m~~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 103 (262)
T 3rkr_A 24 MSSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAA 103 (262)
T ss_dssp -CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred hhccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHh
Confidence 34588999999999999999999999999999999999999999999999888888999999999999999999999999
Q ss_pred hCCccEEEEcCCC-CCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCcc
Q 025672 87 FGKLDILVNAAAG-NFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY 165 (249)
Q Consensus 87 ~~~id~vi~~ag~-~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~ 165 (249)
++++|+||||||. ....++.+.+.++|++.+++|+.++++++++++|.|.+++. |+||++||..+..+.++
T Consensus 104 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~--------g~iv~isS~~~~~~~~~ 175 (262)
T 3rkr_A 104 HGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKR--------GHIINISSLAGKNPVAD 175 (262)
T ss_dssp HSCCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTC--------CEEEEECSSCSSCCCTT
T ss_pred cCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCC--------ceEEEEechhhcCCCCC
Confidence 9999999999998 45567888999999999999999999999999999987653 89999999999999999
Q ss_pred chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhcc
Q 025672 166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245 (249)
Q Consensus 166 ~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s 245 (249)
...|+++|+++++|+++++.|++ ++||+||+|+||+++|++.... ....+..++.+|+|+|+++.||++
T Consensus 176 ~~~Y~asKaa~~~l~~~la~e~~-~~gi~v~~v~PG~v~t~~~~~~----------~~~~~~~~~~~p~dvA~~v~~l~s 244 (262)
T 3rkr_A 176 GAAYTASKWGLNGLMTSAAEELR-QHQVRVSLVAPGSVRTEFGVGL----------SAKKSALGAIEPDDIADVVALLAT 244 (262)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECCC--------------------------CCCHHHHHHHHHHHHT
T ss_pred CchHHHHHHHHHHHHHHHHHHhh-hcCcEEEEEecCCCcCCccccc----------ccccccccCCCHHHHHHHHHHHhc
Confidence 99999999999999999999998 8899999999999998754321 122355678899999999999999
Q ss_pred CCC
Q 025672 246 DAG 248 (249)
Q Consensus 246 ~~a 248 (249)
+.+
T Consensus 245 ~~~ 247 (262)
T 3rkr_A 245 QAD 247 (262)
T ss_dssp CCT
T ss_pred Ccc
Confidence 865
|
| >2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-45 Score=308.93 Aligned_cols=232 Identities=20% Similarity=0.263 Sum_probs=202.8
Q ss_pred CCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEe-CCcchHHHHHHHHH-hcCCCeeEEEccCCCHH-------------
Q 025672 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMG-RRKTVLRSAVAALH-SLGIPAIGLEGDVRKRE------------- 74 (249)
Q Consensus 10 l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~-r~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~------------- 74 (249)
+++|++|||||++|||++++++|+++|++|++++ |+.+.++++.+++. ..+.++.++.+|++|++
T Consensus 44 l~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~ 123 (328)
T 2qhx_A 44 PTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPV 123 (328)
T ss_dssp -CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCC-------CCB
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCeEEEEEeeCCCchhcccccccccccc
Confidence 7899999999999999999999999999999999 99988888888886 55678999999999999
Q ss_pred ----HHHHHHHHHHHHhCCccEEEEcCCCCCCCCCCCCC--------------HHHHHHHHhhhhHHHHHHHHHHHHHHH
Q 025672 75 ----DAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLS--------------PNGFRTVIEIDSVGTFIMCHEALKYLK 136 (249)
Q Consensus 75 ----~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~--------------~~~~~~~~~~n~~~~~~l~~~~~~~~~ 136 (249)
+++++++++.+.++++|+||||||+....++.+.+ .++|+..+++|+.++++++++++|.|.
T Consensus 124 ~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~ 203 (328)
T 2qhx_A 124 TLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVA 203 (328)
T ss_dssp CHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-------------CHHHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999988777777888 899999999999999999999999998
Q ss_pred hcCCCCCCCCCCceEEEeccccccccCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHH
Q 025672 137 KGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEE 216 (249)
Q Consensus 137 ~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~ 216 (249)
++... .....|+||++||..+..+.++...|++||+++.+|+++++.|++ ++||+||+|+||+|+|++ ... ++
T Consensus 204 ~~~~~--~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~el~-~~gIrvn~v~PG~v~T~~--~~~--~~ 276 (328)
T 2qhx_A 204 GTPAK--HRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELA-PLQIRVNGVGPGLSVLVD--DMP--PA 276 (328)
T ss_dssp HSCGG--GSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEESSBSCCC--CSC--HH
T ss_pred hcCCc--CCCCCcEEEEECchhhccCCCCcHHHHHHHHHHHHHHHHHHHHHh-hcCcEEEEEecCcccCCc--ccc--HH
Confidence 75410 001128999999999999999999999999999999999999998 889999999999999876 222 33
Q ss_pred HHHhhhhhhccc-CCCCHHHHHHHHHHhccCCC
Q 025672 217 IRSKATDYMAAY-KFGEKWDIAMAALYLASDAG 248 (249)
Q Consensus 217 ~~~~~~~~~~~~-~~~~~~dva~~v~~l~s~~a 248 (249)
..+.+....|++ |+++|+|+|++++||+++++
T Consensus 277 ~~~~~~~~~p~~~r~~~pedvA~~v~~l~s~~~ 309 (328)
T 2qhx_A 277 VWEGHRSKVPLYQRDSSAAEVSDVVIFLCSSKA 309 (328)
T ss_dssp HHHHHHTTCTTTTSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHHHHhhCCCCCCCCCHHHHHHHHHHHhCccc
Confidence 444555667888 99999999999999999764
|
| >1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-45 Score=307.71 Aligned_cols=230 Identities=23% Similarity=0.328 Sum_probs=203.0
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCC---CeeEEEccCCCHHHHHHHHHHHH
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGI---PAIGLEGDVRKREDAVRVVESTI 84 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~---~~~~~~~Dl~~~~~~~~~~~~~~ 84 (249)
+.+++|++|||||++|||++++++|+++|++|++++|+.++++++.+++...+. ++.++.+|++|+++++++++++.
T Consensus 22 ~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 101 (297)
T 1xhl_A 22 ARFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTL 101 (297)
T ss_dssp -CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHH
Confidence 457899999999999999999999999999999999999989888888876665 78999999999999999999999
Q ss_pred HHhCCccEEEEcCCCCCCCC--CCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc
Q 025672 85 NHFGKLDILVNAAAGNFLVP--AEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 162 (249)
Q Consensus 85 ~~~~~id~vi~~ag~~~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~ 162 (249)
+.++++|+||||||.....+ +.+.+.++|++.+++|+.++++++++++|.|.+++ |+||++||..+..+
T Consensus 102 ~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~---------g~IV~isS~~~~~~ 172 (297)
T 1xhl_A 102 AKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK---------GEIVNVSSIVAGPQ 172 (297)
T ss_dssp HHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT---------CEEEEECCGGGSSS
T ss_pred HhcCCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC---------CEEEEEcCchhccC
Confidence 99999999999999876655 77889999999999999999999999999998652 78999999998888
Q ss_pred C-ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCC-Ch------HHHHHhhhhhhcccCCCCHH
Q 025672 163 T-WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL-AP------EEIRSKATDYMAAYKFGEKW 234 (249)
Q Consensus 163 ~-~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~-~~------~~~~~~~~~~~~~~~~~~~~ 234 (249)
. ++...|++||+++.+|+++++.|++ ++||+||+|+||+|+|++..... .. ++..+.+....|.+|+.+|+
T Consensus 173 ~~~~~~~Y~asKaa~~~l~~~la~el~-~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pe 251 (297)
T 1xhl_A 173 AHSGYPYYACAKAALDQYTRCTAIDLI-QHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPE 251 (297)
T ss_dssp CCTTSHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHH
T ss_pred CCCCcchHHHHHHHHHHHHHHHHHHhc-ccCeEEEEEeeCCCcCccccccccccccccchHHHHHHHHhcCCCCCCcCHH
Confidence 7 8889999999999999999999998 88999999999999987643321 11 12333444557889999999
Q ss_pred HHHHHHHHhccCC
Q 025672 235 DIAMAALYLASDA 247 (249)
Q Consensus 235 dva~~v~~l~s~~ 247 (249)
|+|++++||++++
T Consensus 252 dvA~~v~~l~s~~ 264 (297)
T 1xhl_A 252 EIANIIVFLADRN 264 (297)
T ss_dssp HHHHHHHHHHCHH
T ss_pred HHHHHHHHHhCCc
Confidence 9999999999875
|
| >3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-45 Score=303.69 Aligned_cols=233 Identities=22% Similarity=0.185 Sum_probs=199.2
Q ss_pred CCCCCCCCCcEEEEecCC--CchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHH
Q 025672 4 PFKGDILKGKVALLTGGG--SGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVE 81 (249)
Q Consensus 4 ~~~~~~l~~k~~lItGa~--~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~ 81 (249)
+.....+++|++|||||+ +|||++++++|+++|++|++++|+....+. .+++.....++.+++||++|+++++++++
T Consensus 6 ~~~~~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~ 84 (271)
T 3ek2_A 6 HHHMGFLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDR-ITEFAAEFGSELVFPCDVADDAQIDALFA 84 (271)
T ss_dssp ---CCTTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHH-HHHHHHHTTCCCEEECCTTCHHHHHHHHH
T ss_pred CCCccccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHH-HHHHHHHcCCcEEEECCCCCHHHHHHHHH
Confidence 456677899999999998 999999999999999999999998554444 34443334468899999999999999999
Q ss_pred HHHHHhCCccEEEEcCCCCCC----CCCCC-CCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecc
Q 025672 82 STINHFGKLDILVNAAAGNFL----VPAED-LSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISA 156 (249)
Q Consensus 82 ~~~~~~~~id~vi~~ag~~~~----~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss 156 (249)
++.+.++++|+||||||+... .++.+ .+.++|++.+++|+.++++++++++|.|.+. |+||++||
T Consensus 85 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~----------g~iv~isS 154 (271)
T 3ek2_A 85 SLKTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDD----------ASLLTLSY 154 (271)
T ss_dssp HHHHHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEE----------EEEEEEEC
T ss_pred HHHHHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccC----------ceEEEEec
Confidence 999999999999999998764 55666 8999999999999999999999999998652 88999999
Q ss_pred ccccccCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHH
Q 025672 157 TLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDI 236 (249)
Q Consensus 157 ~~~~~~~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv 236 (249)
..+..+.++...|++||+|+.+|+++++.|++ ++||+||+|+||+|+|++.......++..+.+....|.+|+.+|+|+
T Consensus 155 ~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~-~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~pedv 233 (271)
T 3ek2_A 155 LGAERAIPNYNTMGLAKAALEASVRYLAVSLG-AKGVRVNAISAGPIKTLAASGIKSFGKILDFVESNSPLKRNVTIEQV 233 (271)
T ss_dssp GGGTSBCTTTTHHHHHHHHHHHHHHHHHHHHH-TTTCEEEEEEECCC-----CCCHHHHHHHHHHHHHSTTSSCCCHHHH
T ss_pred cccccCCCCccchhHHHHHHHHHHHHHHHHHH-hcCcEEEEEecCcccchhhhcccchHHHHHHHHhcCCcCCCCCHHHH
Confidence 99999999999999999999999999999998 89999999999999987655443345666777888999999999999
Q ss_pred HHHHHHhccCCC
Q 025672 237 AMAALYLASDAG 248 (249)
Q Consensus 237 a~~v~~l~s~~a 248 (249)
|++++||+++.+
T Consensus 234 a~~i~~l~s~~~ 245 (271)
T 3ek2_A 234 GNAGAFLLSDLA 245 (271)
T ss_dssp HHHHHHHHSGGG
T ss_pred HHHHHHHcCccc
Confidence 999999999864
|
| >2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-45 Score=304.16 Aligned_cols=237 Identities=23% Similarity=0.304 Sum_probs=198.4
Q ss_pred CCCCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCc-chHHHHHHHHH-hcCCCeeEEEccCCC----HHHHHH
Q 025672 5 FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK-TVLRSAVAALH-SLGIPAIGLEGDVRK----REDAVR 78 (249)
Q Consensus 5 ~~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~-~~~~~~~~~~~-~~~~~~~~~~~Dl~~----~~~~~~ 78 (249)
....++++|++|||||++|||++++++|+++|++|++++|+. +.++++.+++. ..+.++.++++|++| ++++++
T Consensus 16 ~~~~~l~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~ 95 (288)
T 2x9g_A 16 PRGSHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEE 95 (288)
T ss_dssp ------CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHH
T ss_pred CCCcCCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHH
Confidence 344558899999999999999999999999999999999998 88888888886 556789999999999 999999
Q ss_pred HHHHHHHHhCCccEEEEcCCCCCCCCC-----CC-----CCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCC
Q 025672 79 VVESTINHFGKLDILVNAAAGNFLVPA-----ED-----LSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSG 148 (249)
Q Consensus 79 ~~~~~~~~~~~id~vi~~ag~~~~~~~-----~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 148 (249)
+++++.+.++++|+||||||.....++ .+ .+.++|++.+++|+.++++++++++|.|.++... .....
T Consensus 96 ~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~--~~~~~ 173 (288)
T 2x9g_A 96 IINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPN--CTSSN 173 (288)
T ss_dssp HHHHHHHHHSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC----------CCC
T ss_pred HHHHHHHhcCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCC--CCCCC
Confidence 999999999999999999998766666 56 7889999999999999999999999999765310 00113
Q ss_pred ceEEEeccccccccCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhccc
Q 025672 149 GIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAY 228 (249)
Q Consensus 149 g~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~ 228 (249)
|+||++||..+..+.++...|++||+|+.+|+++++.|++ ++||+||+|+||+++|++ . ..++ ..+.+....|.+
T Consensus 174 g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~-~~gI~vn~v~PG~v~t~~-~--~~~~-~~~~~~~~~p~~ 248 (288)
T 2x9g_A 174 LSIVNLCDAMVDQPCMAFSLYNMGKHALVGLTQSAALELA-PYGIRVNGVAPGVSLLPV-A--MGEE-EKDKWRRKVPLG 248 (288)
T ss_dssp EEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEESSCSCCT-T--SCHH-HHHHHHHTCTTT
T ss_pred eEEEEEecccccCCCCCCchHHHHHHHHHHHHHHHHHHhh-ccCeEEEEEEeccccCcc-c--cChH-HHHHHHhhCCCC
Confidence 8999999999999999999999999999999999999998 889999999999999886 2 2232 234455667889
Q ss_pred CC-CCHHHHHHHHHHhccCCC
Q 025672 229 KF-GEKWDIAMAALYLASDAG 248 (249)
Q Consensus 229 ~~-~~~~dva~~v~~l~s~~a 248 (249)
|+ .+|+|+|++++||+++++
T Consensus 249 r~~~~pedvA~~v~~l~s~~~ 269 (288)
T 2x9g_A 249 RREASAEQIADAVIFLVSGSA 269 (288)
T ss_dssp SSCCCHHHHHHHHHHHHSGGG
T ss_pred CCCCCHHHHHHHHHHHhCccc
Confidence 99 999999999999999864
|
| >3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-45 Score=302.78 Aligned_cols=231 Identities=21% Similarity=0.209 Sum_probs=204.0
Q ss_pred CCCCCCCcEEEEecCC--CchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHH
Q 025672 6 KGDILKGKVALLTGGG--SGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVEST 83 (249)
Q Consensus 6 ~~~~l~~k~~lItGa~--~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 83 (249)
....+++|++|||||+ +|||+++|++|+++|++|++++|+. .++..+++.....++.++.||++|+++++++++++
T Consensus 20 ~M~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~--~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~ 97 (280)
T 3nrc_A 20 HMGFLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ--FKDRVEKLCAEFNPAAVLPCDVISDQEIKDLFVEL 97 (280)
T ss_dssp --CTTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTT--CHHHHHHHHGGGCCSEEEECCTTCHHHHHHHHHHH
T ss_pred cccccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCch--HHHHHHHHHHhcCCceEEEeecCCHHHHHHHHHHH
Confidence 3456889999999988 7899999999999999999999987 34455555544456899999999999999999999
Q ss_pred HHHhCCccEEEEcCCCCCC----CCCCC-CCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccc
Q 025672 84 INHFGKLDILVNAAAGNFL----VPAED-LSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL 158 (249)
Q Consensus 84 ~~~~~~id~vi~~ag~~~~----~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~ 158 (249)
.+.++++|+||||||.... .++.+ .+.++|++.+++|+.++++++++++|.|.++ +|+||++||..
T Consensus 98 ~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~---------~g~iv~isS~~ 168 (280)
T 3nrc_A 98 GKVWDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNR---------NASMVALTYIG 168 (280)
T ss_dssp HHHCSSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT---------TCEEEEEECGG
T ss_pred HHHcCCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcC---------CCeEEEEeccc
Confidence 9999999999999998754 44444 8899999999999999999999999999765 28999999999
Q ss_pred ccccCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHH
Q 025672 159 HYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAM 238 (249)
Q Consensus 159 ~~~~~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~ 238 (249)
+..+.++...|++||+|+.+|+++++.|++ ++||+||+|+||+|+|++.......++..+......|.+|+.+|+|+|+
T Consensus 169 ~~~~~~~~~~Y~asKaal~~~~~~la~e~~-~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~pedvA~ 247 (280)
T 3nrc_A 169 AEKAMPSYNTMGVAKASLEATVRYTALALG-EDGIKVNAVSAGPIKTLAASGISNFKKMLDYNAMVSPLKKNVDIMEVGN 247 (280)
T ss_dssp GTSCCTTTHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECCCCCSGGGGCTTHHHHHHHHHHHSTTCSCCCHHHHHH
T ss_pred cccCCCCchhhHHHHHHHHHHHHHHHHHHH-HcCcEEEEEeeccccchhhhcCcchHHHHHHHHhcCCCCCCCCHHHHHH
Confidence 999999999999999999999999999998 8899999999999998876655555677777888899999999999999
Q ss_pred HHHHhccCCC
Q 025672 239 AALYLASDAG 248 (249)
Q Consensus 239 ~v~~l~s~~a 248 (249)
+++||+++++
T Consensus 248 ~v~~l~s~~~ 257 (280)
T 3nrc_A 248 TVAFLCSDMA 257 (280)
T ss_dssp HHHHTTSGGG
T ss_pred HHHHHhCccc
Confidence 9999999864
|
| >2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-45 Score=298.96 Aligned_cols=225 Identities=30% Similarity=0.417 Sum_probs=196.9
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhC
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 88 (249)
.+++|++|||||++|||++++++|+++|++|++++|+.+. +++.+++. + .++++|++|+++++++++++.+.++
T Consensus 3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~----~-~~~~~D~~~~~~~~~~~~~~~~~~g 76 (256)
T 2d1y_A 3 LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAIG----G-AFFQVDLEDERERVRFVEEAAYALG 76 (256)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHHT----C-EEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHhh----C-CEEEeeCCCHHHHHHHHHHHHHHcC
Confidence 4789999999999999999999999999999999999887 66666653 4 7899999999999999999999999
Q ss_pred CccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchh
Q 025672 89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH 168 (249)
Q Consensus 89 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~ 168 (249)
++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|.+++. |+||++||..+..+.++...
T Consensus 77 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~--------g~iv~isS~~~~~~~~~~~~ 148 (256)
T 2d1y_A 77 RVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGG--------GAIVNVASVQGLFAEQENAA 148 (256)
T ss_dssp CCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTC--------EEEEEECCGGGTSBCTTBHH
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC--------cEEEEEccccccCCCCCChh
Confidence 9999999999887778888999999999999999999999999999987643 89999999999999899999
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCC----CChHHHHHhhhhhhcccCCCCHHHHHHHHHHhc
Q 025672 169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK----LAPEEIRSKATDYMAAYKFGEKWDIAMAALYLA 244 (249)
Q Consensus 169 y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~ 244 (249)
|++||+++++|+++++.|++ ++||+||+|+||+++|++.... ...++..+.+....|.+|+.+|+|+|++++||+
T Consensus 149 Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~ 227 (256)
T 2d1y_A 149 YNASKGGLVNLTRSLALDLA-PLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFLA 227 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCCHHHHHHHC--------CHHHHTTSTTSSCBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHh-hcCeEEEEEeeCCccCchhhhccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh
Confidence 99999999999999999998 8899999999999998753321 111222333455678889999999999999999
Q ss_pred cCCC
Q 025672 245 SDAG 248 (249)
Q Consensus 245 s~~a 248 (249)
++++
T Consensus 228 s~~~ 231 (256)
T 2d1y_A 228 SEKA 231 (256)
T ss_dssp SGGG
T ss_pred Cchh
Confidence 9864
|
| >1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-45 Score=304.02 Aligned_cols=229 Identities=23% Similarity=0.344 Sum_probs=202.2
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCC---CeeEEEccCCCHHHHHHHHHHHHH
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGI---PAIGLEGDVRKREDAVRVVESTIN 85 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~---~~~~~~~Dl~~~~~~~~~~~~~~~ 85 (249)
.+++|++|||||++|||++++++|+++|++|++++|+.++++++.+++...+. ++.++.+|++|+++++++++++.+
T Consensus 3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 82 (280)
T 1xkq_A 3 RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLK 82 (280)
T ss_dssp TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHH
Confidence 47899999999999999999999999999999999999988888888876555 789999999999999999999999
Q ss_pred HhCCccEEEEcCCCCCCCC----CCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc
Q 025672 86 HFGKLDILVNAAAGNFLVP----AEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT 161 (249)
Q Consensus 86 ~~~~id~vi~~ag~~~~~~----~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~ 161 (249)
.++++|+||||||.....+ +.+.+.++|++.+++|+.++++++++++|.|.+++ |+||++||..+..
T Consensus 83 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~---------g~iv~isS~~~~~ 153 (280)
T 1xkq_A 83 QFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK---------GEIVNVSSIVAGP 153 (280)
T ss_dssp HHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT---------CEEEEECCGGGSS
T ss_pred hcCCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCC---------CcEEEecCccccC
Confidence 9999999999999876655 67888999999999999999999999999997652 7899999999888
Q ss_pred cC-ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCC-Ch------HHHHHhhhhhhcccCCCCH
Q 025672 162 AT-WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL-AP------EEIRSKATDYMAAYKFGEK 233 (249)
Q Consensus 162 ~~-~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~-~~------~~~~~~~~~~~~~~~~~~~ 233 (249)
+. ++...|++||+++.+|+++++.|++ ++||+||+|+||+++|++..... .. ++..+.+....|.+|+.+|
T Consensus 154 ~~~~~~~~Y~asK~a~~~~~~~la~e~~-~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p 232 (280)
T 1xkq_A 154 QAQPDFLYYAIAKAALDQYTRSTAIDLA-KFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKP 232 (280)
T ss_dssp SCCCSSHHHHHHHHHHHHHHHHHHHHHH-TTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCH
T ss_pred CCCCcccHHHHHHHHHHHHHHHHHHHhc-cCCeEEEEEeeCcCcCCcccccccccccccchHHHHHHHHcCCCCCCCCCH
Confidence 87 8889999999999999999999998 89999999999999987643321 11 1233344455788999999
Q ss_pred HHHHHHHHHhccCC
Q 025672 234 WDIAMAALYLASDA 247 (249)
Q Consensus 234 ~dva~~v~~l~s~~ 247 (249)
+|+|++++||+++.
T Consensus 233 edvA~~v~~l~s~~ 246 (280)
T 1xkq_A 233 EHIANIILFLADRN 246 (280)
T ss_dssp HHHHHHHHHHHCHH
T ss_pred HHHHHHHHHhcCcc
Confidence 99999999999875
|
| >1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-45 Score=302.50 Aligned_cols=233 Identities=22% Similarity=0.276 Sum_probs=197.1
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeC-CcchHHHHHHHHHhc-CCCeeEEEccCCCH----HHHHHHHH
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGR-RKTVLRSAVAALHSL-GIPAIGLEGDVRKR----EDAVRVVE 81 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r-~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~----~~~~~~~~ 81 (249)
..+++|++|||||++|||++++++|+++|++|++++| +.+.++++.+++... +.++.++.+|++|+ ++++++++
T Consensus 7 ~~~~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 86 (276)
T 1mxh_A 7 EASECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIID 86 (276)
T ss_dssp ----CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHH
T ss_pred hccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHH
Confidence 3468999999999999999999999999999999999 888888888888655 67899999999999 99999999
Q ss_pred HHHHHhCCccEEEEcCCCCCCCCCCCCCH-----------HHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCce
Q 025672 82 STINHFGKLDILVNAAAGNFLVPAEDLSP-----------NGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGI 150 (249)
Q Consensus 82 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~-----------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ 150 (249)
++.+.++++|+||||||.....++.+.+. ++|++.+++|+.++++++++++|.|. ++. .....+++
T Consensus 87 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~-~~~--~~~~~~g~ 163 (276)
T 1mxh_A 87 CSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQG-EGG--AWRSRNLS 163 (276)
T ss_dssp HHHHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC----------CCCEE
T ss_pred HHHHhcCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHh-cCC--CCCCCCcE
Confidence 99999999999999999887777778888 99999999999999999999999986 321 00111389
Q ss_pred EEEeccccccccCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccC-
Q 025672 151 IINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK- 229 (249)
Q Consensus 151 iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~- 229 (249)
||++||..+..+.++...|++||+++.+|+++++.|++ ++||+||+|+||+++|+ ... ++...+.+....|.+|
T Consensus 164 iv~isS~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~-~~gi~v~~v~PG~v~t~---~~~-~~~~~~~~~~~~p~~r~ 238 (276)
T 1mxh_A 164 VVNLCDAMTDLPLPGFCVYTMAKHALGGLTRAAALELA-PRHIRVNAVAPGLSLLP---PAM-PQETQEEYRRKVPLGQS 238 (276)
T ss_dssp EEEECCGGGGSCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEESSBSCC---SSS-CHHHHHHHHTTCTTTSC
T ss_pred EEEECchhhcCCCCCCeehHHHHHHHHHHHHHHHHHHh-hcCeEEEEEecCcccCC---ccC-CHHHHHHHHhcCCCCCC
Confidence 99999999999999999999999999999999999998 88999999999999987 222 2344444556678888
Q ss_pred CCCHHHHHHHHHHhccCCC
Q 025672 230 FGEKWDIAMAALYLASDAG 248 (249)
Q Consensus 230 ~~~~~dva~~v~~l~s~~a 248 (249)
+.+|+|+|++++||+++++
T Consensus 239 ~~~~~dva~~v~~l~s~~~ 257 (276)
T 1mxh_A 239 EASAAQIADAIAFLVSKDA 257 (276)
T ss_dssp CBCHHHHHHHHHHHHSGGG
T ss_pred CCCHHHHHHHHHHHhCccc
Confidence 9999999999999999764
|
| >2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-45 Score=299.07 Aligned_cols=228 Identities=26% Similarity=0.347 Sum_probs=199.6
Q ss_pred CCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCC
Q 025672 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK 89 (249)
Q Consensus 10 l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 89 (249)
+++|++|||||++|||++++++|+++|++|++++|+.+ +...+++...+.++.++.+|++|+++++++++++.+.+++
T Consensus 2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~--~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 79 (255)
T 2q2v_A 2 LKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP--APALAEIARHGVKAVHHPADLSDVAQIEALFALAEREFGG 79 (255)
T ss_dssp CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCC--HHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHHSS
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence 67999999999999999999999999999999999876 5566677666778999999999999999999999999999
Q ss_pred ccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhh
Q 025672 90 LDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHV 169 (249)
Q Consensus 90 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y 169 (249)
+|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|.+++. |+||++||..+..+.++...|
T Consensus 80 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~--------g~iv~isS~~~~~~~~~~~~Y 151 (255)
T 2q2v_A 80 VDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARNW--------GRIINIASVHGLVGSTGKAAY 151 (255)
T ss_dssp CSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTC--------EEEEEECCGGGTSCCTTBHHH
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCC--------cEEEEEcCchhccCCCCchhH
Confidence 999999999877777888899999999999999999999999999987653 899999999999998899999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCC-hHHH---H----Hhh-hhhhcccCCCCHHHHHHHH
Q 025672 170 SAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA-PEEI---R----SKA-TDYMAAYKFGEKWDIAMAA 240 (249)
Q Consensus 170 ~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~-~~~~---~----~~~-~~~~~~~~~~~~~dva~~v 240 (249)
+++|+++.+|+++++.|++ ++||+||+|+||+++|++...... .+.. . ..+ ....|.+|+.+|+|+|+++
T Consensus 152 ~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~ 230 (255)
T 2q2v_A 152 VAAKHGVVGLTKVVGLETA-TSNVTCNAICPGWVLTPLVQKQIDDRAANGGDPLQAQHDLLAEKQPSLAFVTPEHLGELV 230 (255)
T ss_dssp HHHHHHHHHHHHHHHHHTT-TSSEEEEEEEESSBCCHHHHHHHHHHHHHTCCHHHHHHHHHTTTCTTCCCBCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhc-ccCcEEEEEeeCCCcCcchhhhcccccccccchHHHHHHHHhccCCCCCCcCHHHHHHHH
Confidence 9999999999999999998 889999999999999875432110 0111 1 223 4556888999999999999
Q ss_pred HHhccCCC
Q 025672 241 LYLASDAG 248 (249)
Q Consensus 241 ~~l~s~~a 248 (249)
+||+++++
T Consensus 231 ~~l~s~~~ 238 (255)
T 2q2v_A 231 LFLCSEAG 238 (255)
T ss_dssp HHHTSGGG
T ss_pred HHHhCCcc
Confidence 99999864
|
| >4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-45 Score=299.81 Aligned_cols=230 Identities=27% Similarity=0.281 Sum_probs=205.4
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEE-EeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHH
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAI-MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l-~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 86 (249)
+.+.+|++|||||++|||++++++|+++|++|++ ..|+.+.+++..+++...+.++.++.+|++|+++++++++++.+.
T Consensus 22 ~~l~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 101 (267)
T 4iiu_A 22 SNAMSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIAQ 101 (267)
T ss_dssp ---CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence 3467899999999999999999999999999866 557777888888888887889999999999999999999999999
Q ss_pred hCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccc
Q 025672 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ 166 (249)
Q Consensus 87 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~ 166 (249)
++++|+||||||.....++.+.+.++|+..+++|+.+++++++.+++.|.+... +|+||++||..+..+.++.
T Consensus 102 ~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~-------~g~iv~isS~~~~~~~~~~ 174 (267)
T 4iiu_A 102 HGAWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQ-------GGRIITLSSVSGVMGNRGQ 174 (267)
T ss_dssp HCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTS-------CEEEEEECCHHHHHCCTTC
T ss_pred hCCccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC-------CcEEEEEcchHhccCCCCC
Confidence 999999999999988888888999999999999999999999999998863322 4899999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhccC
Q 025672 167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246 (249)
Q Consensus 167 ~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~ 246 (249)
..|++||+|+.+|+++++.|++ ++||+||+|+||+|+|++.... +...+......|.+|+.+|+|+|+++.||+++
T Consensus 175 ~~Y~asKaa~~~~~~~la~e~~-~~gi~v~~v~PG~v~t~~~~~~---~~~~~~~~~~~p~~~~~~~edva~~~~~L~s~ 250 (267)
T 4iiu_A 175 VNYSAAKAGIIGATKALAIELA-KRKITVNCIAPGLIDTGMIEME---ESALKEAMSMIPMKRMGQAEEVAGLASYLMSD 250 (267)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCSTTCCCC---HHHHHHHHHTCTTCSCBCHHHHHHHHHHHHSG
T ss_pred chhHHHHHHHHHHHHHHHHHHh-hcCeEEEEEEEeeecCCccccc---HHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCC
Confidence 9999999999999999999998 8899999999999998765432 44556677788999999999999999999998
Q ss_pred CC
Q 025672 247 AG 248 (249)
Q Consensus 247 ~a 248 (249)
++
T Consensus 251 ~~ 252 (267)
T 4iiu_A 251 IA 252 (267)
T ss_dssp GG
T ss_pred cc
Confidence 65
|
| >3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=9.3e-45 Score=294.42 Aligned_cols=227 Identities=23% Similarity=0.307 Sum_probs=200.5
Q ss_pred CCCCCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcC-CCeeEEEccC--CCHHHHHHHH
Q 025672 4 PFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG-IPAIGLEGDV--RKREDAVRVV 80 (249)
Q Consensus 4 ~~~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dl--~~~~~~~~~~ 80 (249)
++....+++|+++||||++|||++++++|+++|++|++++|+.++++++.+++...+ .++.++.+|+ +|.+++++++
T Consensus 6 ~~~~~~l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~ 85 (247)
T 3i1j_A 6 SAHPELLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELA 85 (247)
T ss_dssp CCCTTTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHH
T ss_pred CCCCccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHH
Confidence 455667999999999999999999999999999999999999999999999987665 5677777777 9999999999
Q ss_pred HHHHHHhCCccEEEEcCCCC-CCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccc
Q 025672 81 ESTINHFGKLDILVNAAAGN-FLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH 159 (249)
Q Consensus 81 ~~~~~~~~~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~ 159 (249)
+++.+.++++|+||||||.. ...++.+.+.++|++.+++|+.++++++++++|.|.+++. ++||++||..+
T Consensus 86 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~--------~~iv~isS~~~ 157 (247)
T 3i1j_A 86 ARVEHEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSED--------ASIAFTSSSVG 157 (247)
T ss_dssp HHHHHHHSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSS--------EEEEEECCGGG
T ss_pred HHHHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCC--------CeEEEEcchhh
Confidence 99999999999999999986 4567888999999999999999999999999999987653 89999999999
Q ss_pred cccCccchhhHHHHHHHHHHHHHHHHHhcCC-CCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHH
Q 025672 160 YTATWYQIHVSAAKAAVDSITRSLALEWGTD-YAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAM 238 (249)
Q Consensus 160 ~~~~~~~~~y~~sK~a~~~l~~~la~e~~~~-~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~ 238 (249)
..+.++...|+++|+|+.+|+++++.|++ + .||+||+|+||+++|++.... ....+..++.+|+|+|+
T Consensus 158 ~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~~~i~v~~v~PG~v~t~~~~~~----------~~~~~~~~~~~p~dva~ 226 (247)
T 3i1j_A 158 RKGRANWGAYGVSKFATEGLMQTLADELE-GVTAVRANSINPGATRTGMRAQA----------YPDENPLNNPAPEDIMP 226 (247)
T ss_dssp TSCCTTCHHHHHHHHHHHHHHHHHHHHHT-TTSSEEEEEEECCCCSSHHHHHH----------STTSCGGGSCCGGGGTH
T ss_pred cCCCCCcchhHHHHHHHHHHHHHHHHHhc-CCCCeEEEEEecCcccCccchhc----------ccccCccCCCCHHHHHH
Confidence 99999999999999999999999999997 5 899999999999998653221 11122346789999999
Q ss_pred HHHHhccCCCC
Q 025672 239 AALYLASDAGQ 249 (249)
Q Consensus 239 ~v~~l~s~~a~ 249 (249)
+++||++++++
T Consensus 227 ~~~~l~s~~~~ 237 (247)
T 3i1j_A 227 VYLYLMGPDST 237 (247)
T ss_dssp HHHHHHSGGGT
T ss_pred HHHHHhCchhc
Confidence 99999998753
|
| >3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-45 Score=299.49 Aligned_cols=222 Identities=19% Similarity=0.205 Sum_probs=182.8
Q ss_pred CCCCCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHH
Q 025672 4 PFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVEST 83 (249)
Q Consensus 4 ~~~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 83 (249)
++..+++++|++|||||++|||++++++|+++|++|++++|+.+++.+...+. .+.++.+|++|+++++++++++
T Consensus 19 ~~~~m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~Dv~~~~~v~~~~~~~ 93 (260)
T 3gem_A 19 FQGHMTLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQA-----GAVALYGDFSCETGIMAFIDLL 93 (260)
T ss_dssp --------CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHHHH-----TCEEEECCTTSHHHHHHHHHHH
T ss_pred cccCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhc-----CCeEEECCCCCHHHHHHHHHHH
Confidence 35667899999999999999999999999999999999999987664433332 3789999999999999999999
Q ss_pred HHHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC
Q 025672 84 INHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT 163 (249)
Q Consensus 84 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~ 163 (249)
.+.++++|+||||||.....+ .+.+.++|++.+++|+.++++++++++|.|.+++. |+||++||..+..+.
T Consensus 94 ~~~~g~iD~lv~nAg~~~~~~-~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~--------g~iv~isS~~~~~~~ 164 (260)
T 3gem_A 94 KTQTSSLRAVVHNASEWLAET-PGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEV--------ADIVHISDDVTRKGS 164 (260)
T ss_dssp HHHCSCCSEEEECCCCCCCCC-TTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSS--------CEEEEECCGGGGTCC
T ss_pred HHhcCCCCEEEECCCccCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--------cEEEEECChhhcCCC
Confidence 999999999999999876555 56788999999999999999999999999987653 899999999999999
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHh
Q 025672 164 WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYL 243 (249)
Q Consensus 164 ~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l 243 (249)
++...|++||+|+.+|+++++.|++ + +|+||+|+||+++|++.. .+...+.+....|++|+++|+|+|++++||
T Consensus 165 ~~~~~Y~asKaa~~~l~~~la~e~~-~-~Irvn~v~PG~v~t~~~~----~~~~~~~~~~~~p~~r~~~~edva~~v~~L 238 (260)
T 3gem_A 165 SKHIAYCATKAGLESLTLSFAARFA-P-LVKVNGIAPALLMFQPKD----DAAYRANALAKSALGIEPGAEVIYQSLRYL 238 (260)
T ss_dssp SSCHHHHHHHHHHHHHHHHHHHHHT-T-TCEEEEEEECTTCC-------------------CCSCCCCCTHHHHHHHHHH
T ss_pred CCcHhHHHHHHHHHHHHHHHHHHHC-C-CCEEEEEeecccccCCCC----CHHHHHHHHhcCCCCCCCCHHHHHHHHHHH
Confidence 9999999999999999999999998 6 699999999999987532 233445566778999999999999999999
Q ss_pred cc
Q 025672 244 AS 245 (249)
Q Consensus 244 ~s 245 (249)
++
T Consensus 239 ~~ 240 (260)
T 3gem_A 239 LD 240 (260)
T ss_dssp HH
T ss_pred hh
Confidence 84
|
| >3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-45 Score=302.81 Aligned_cols=223 Identities=24% Similarity=0.351 Sum_probs=197.4
Q ss_pred CCCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHH
Q 025672 6 KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN 85 (249)
Q Consensus 6 ~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 85 (249)
+.+++++|++|||||++|||+++|++|+++|++|++++|+.+.++ ....+.+|++|.++++++++++.+
T Consensus 22 ~m~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~-----------~~~~~~~Dv~~~~~~~~~~~~~~~ 90 (266)
T 3uxy_A 22 SMQGFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIA-----------ADLHLPGDLREAAYADGLPGAVAA 90 (266)
T ss_dssp ----CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSC-----------CSEECCCCTTSHHHHHHHHHHHHH
T ss_pred hhhCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH-----------hhhccCcCCCCHHHHHHHHHHHHH
Confidence 345688999999999999999999999999999999999876432 224568999999999999999999
Q ss_pred HhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCcc
Q 025672 86 HFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY 165 (249)
Q Consensus 86 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~ 165 (249)
.++++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|.+++. |+||++||..+..+.++
T Consensus 91 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~--------g~iv~isS~~~~~~~~~ 162 (266)
T 3uxy_A 91 GLGRLDIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAGG--------GAIVNVASCWGLRPGPG 162 (266)
T ss_dssp HHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--------EEEEEECCSBTTBCCTT
T ss_pred hcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC--------cEEEEECCHHhCCCCCC
Confidence 9999999999999988888889999999999999999999999999999987653 89999999999999999
Q ss_pred chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccC-----CCChHHHHHhhhhhhcccCCCCHHHHHHHH
Q 025672 166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVS-----KLAPEEIRSKATDYMAAYKFGEKWDIAMAA 240 (249)
Q Consensus 166 ~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~dva~~v 240 (249)
...|++||+|+++|+++++.|++ ++||+||+|+||+++|++... ....++..+.+....|.+|+++|||+|+++
T Consensus 163 ~~~Y~asKaa~~~l~~~la~e~~-~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v 241 (266)
T 3uxy_A 163 HALYCLTKAALASLTQCMGMDHA-PQGIRINAVCPNEVNTPMLRTGFAKRGFDPDRAVAELGRTVPLGRIAEPEDIADVV 241 (266)
T ss_dssp BHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEESSBCCHHHHHHHHHTTCCHHHHHHHHHTTSTTSSCBCHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHHHHHhh-hcCcEEEEEeeCCCcchHhhhhhhcccccchHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence 99999999999999999999998 889999999999999876432 223445556677888999999999999999
Q ss_pred HHhccCCC
Q 025672 241 LYLASDAG 248 (249)
Q Consensus 241 ~~l~s~~a 248 (249)
+||+++++
T Consensus 242 ~~L~s~~~ 249 (266)
T 3uxy_A 242 LFLASDAA 249 (266)
T ss_dssp HHHHSGGG
T ss_pred HHHhCchh
Confidence 99999875
|
| >3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-45 Score=297.03 Aligned_cols=222 Identities=21% Similarity=0.178 Sum_probs=196.1
Q ss_pred CcEEEEecCCCchhHHHHHHHHHcC--CeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCC
Q 025672 12 GKVALLTGGGSGIGFEISLQLGKHG--AAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK 89 (249)
Q Consensus 12 ~k~~lItGa~~giG~~~a~~l~~~G--~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 89 (249)
+|++|||||++|||++++++|+++| ++|++++|+.+.++++.+++ +.++.++++|++|+++++++++++.+.+++
T Consensus 2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 78 (254)
T 3kzv_A 2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKY---GDRFFYVVGDITEDSVLKQLVNAAVKGHGK 78 (254)
T ss_dssp CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHH---GGGEEEEESCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHh---CCceEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 6999999999999999999999986 68999999998888887776 457899999999999999999999999999
Q ss_pred ccEEEEcCCCCC-CCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchh
Q 025672 90 LDILVNAAAGNF-LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH 168 (249)
Q Consensus 90 id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~ 168 (249)
+|++|||||... ..++.+.+.++|++.+++|+.++++++++++|.|.+++ |+||++||..+..+.++...
T Consensus 79 id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~---------g~iv~isS~~~~~~~~~~~~ 149 (254)
T 3kzv_A 79 IDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTN---------GNVVFVSSDACNMYFSSWGA 149 (254)
T ss_dssp CCEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT---------CEEEEECCSCCCCSSCCSHH
T ss_pred ccEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC---------CeEEEEcCchhccCCCCcch
Confidence 999999999864 47888999999999999999999999999999998753 88999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCC-------hHHHHHhhhhhhcccCCCCHHHHHHHHH
Q 025672 169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA-------PEEIRSKATDYMAAYKFGEKWDIAMAAL 241 (249)
Q Consensus 169 y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~dva~~v~ 241 (249)
|++||+|+.+|+++++.|+ +||+||+|+||+++|++...... .++..+.+....|.+|+++|+|+|++++
T Consensus 150 Y~asK~a~~~~~~~la~e~---~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~p~dva~~v~ 226 (254)
T 3kzv_A 150 YGSSKAALNHFAMTLANEE---RQVKAIAVAPGIVDTDMQVNIRENVGPSSMSAEQLKMFRGLKENNQLLDSSVPATVYA 226 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHC---TTSEEEEEECSSCCCCCSCCCCCCCCTTTSCHHHHHHHHHHHTTC----CHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhc---cCcEEEEEeCCcccchhHHHhhcccCccccCHHHHHHHHHHHhcCCcCCcccHHHHHH
Confidence 9999999999999999997 37999999999999886543221 3555667788889999999999999999
Q ss_pred HhccCCC
Q 025672 242 YLASDAG 248 (249)
Q Consensus 242 ~l~s~~a 248 (249)
||+|+++
T Consensus 227 ~L~s~~~ 233 (254)
T 3kzv_A 227 KLALHGI 233 (254)
T ss_dssp HHHHHCC
T ss_pred HHHhhcc
Confidence 9999874
|
| >3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-45 Score=300.70 Aligned_cols=230 Identities=28% Similarity=0.367 Sum_probs=205.0
Q ss_pred CCCCCcEEEEecCC--CchhHHHHHHHHHcCCeEEEEeCCcchH-HHHHHHHH-hcCCCeeEEEccCCCHHHHHHHHHHH
Q 025672 8 DILKGKVALLTGGG--SGIGFEISLQLGKHGAAIAIMGRRKTVL-RSAVAALH-SLGIPAIGLEGDVRKREDAVRVVEST 83 (249)
Q Consensus 8 ~~l~~k~~lItGa~--~giG~~~a~~l~~~G~~v~l~~r~~~~~-~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~ 83 (249)
+++++|++|||||+ +|||++++++|+++|++|++++|+.... ++..+++. ..+.++.++++|++|+++++++++++
T Consensus 16 ~~l~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~ 95 (267)
T 3gdg_A 16 LSLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKDV 95 (267)
T ss_dssp HCCTTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHHH
T ss_pred cCcCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHHHH
Confidence 46899999999999 9999999999999999999999887665 66666665 34778999999999999999999999
Q ss_pred HHHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC
Q 025672 84 INHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT 163 (249)
Q Consensus 84 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~ 163 (249)
.+.++++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|.+++. |+||++||..+..+.
T Consensus 96 ~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~--------g~iv~isS~~~~~~~ 167 (267)
T 3gdg_A 96 VADFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGT--------GSLVITASMSGHIAN 167 (267)
T ss_dssp HHHTSCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--------CEEEEECCGGGTSCC
T ss_pred HHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcCC--------ceEEEEccccccccC
Confidence 999999999999999988888889999999999999999999999999999987653 899999999888765
Q ss_pred --ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHH
Q 025672 164 --WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAAL 241 (249)
Q Consensus 164 --~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~ 241 (249)
++...|++||+|+++|+++++.|++ +. |+||+|+||+++|++... . +++..+.+....|.+|+++|+|+|++++
T Consensus 168 ~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~-i~v~~v~PG~v~t~~~~~-~-~~~~~~~~~~~~~~~r~~~~~dva~~~~ 243 (267)
T 3gdg_A 168 FPQEQTSYNVAKAGCIHMARSLANEWR-DF-ARVNSISPGYIDTGLSDF-V-PKETQQLWHSMIPMGRDGLAKELKGAYV 243 (267)
T ss_dssp SSSCCHHHHHHHHHHHHHHHHHHHHTT-TT-CEEEEEEECCEECSCGGG-S-CHHHHHHHHTTSTTSSCEETHHHHHHHH
T ss_pred CCCCCCcchHHHHHHHHHHHHHHHHhc-cC-cEEEEEECCccccchhhh-C-CHHHHHHHHhcCCCCCCcCHHHHHhHhh
Confidence 5788999999999999999999997 66 999999999999875432 2 3455666778889999999999999999
Q ss_pred HhccCCCC
Q 025672 242 YLASDAGQ 249 (249)
Q Consensus 242 ~l~s~~a~ 249 (249)
||++++++
T Consensus 244 ~l~s~~~~ 251 (267)
T 3gdg_A 244 YFASDAST 251 (267)
T ss_dssp HHHSTTCT
T ss_pred eeecCccc
Confidence 99998753
|
| >3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-45 Score=299.92 Aligned_cols=230 Identities=31% Similarity=0.387 Sum_probs=208.5
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEE-eCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHH
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIM-GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~-~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 86 (249)
.++++|++|||||++|||++++++|+++|++|+++ .|+.+.+++..+++...+.++.++.+|++|.++++.+++++.+.
T Consensus 3 ~~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 82 (255)
T 3icc_A 3 SMLKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNE 82 (255)
T ss_dssp CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CccCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHHHHH
Confidence 35789999999999999999999999999999885 67777888888888888888999999999999999999999887
Q ss_pred hC------CccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccc
Q 025672 87 FG------KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY 160 (249)
Q Consensus 87 ~~------~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~ 160 (249)
++ ++|++|||||.....++.+.+.++|++.+++|+.++++++++++|.|.+ +++||++||..+.
T Consensus 83 ~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~----------~~~iv~isS~~~~ 152 (255)
T 3icc_A 83 LQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRD----------NSRIINISSAATR 152 (255)
T ss_dssp HHHHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE----------EEEEEEECCGGGT
T ss_pred hcccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCC----------CCEEEEeCChhhc
Confidence 64 4999999999987788888999999999999999999999999999843 2889999999999
Q ss_pred ccCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHH
Q 025672 161 TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAA 240 (249)
Q Consensus 161 ~~~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v 240 (249)
.+.++...|++||+|+++|+++++.|++ ++||+||+|+||+++|++.......+...+......|++|+.+|+|+|+++
T Consensus 153 ~~~~~~~~Y~asKaa~~~~~~~la~e~~-~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~ 231 (255)
T 3icc_A 153 ISLPDFIAYSMTKGAINTMTFTLAKQLG-ARGITVNAILPGFVKTDMNAELLSDPMMKQYATTISAFNRLGEVEDIADTA 231 (255)
T ss_dssp SCCTTBHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECCBCCSSSTTTTTSHHHHHHHHHTSTTSSCBCHHHHHHHH
T ss_pred cCCCCcchhHHhHHHHHHHHHHHHHHHH-hcCeEEEEEEEeeecccchhhhcccHHHHHhhhccCCcCCCCCHHHHHHHH
Confidence 9999999999999999999999999998 889999999999999887766655566666777788899999999999999
Q ss_pred HHhccCCC
Q 025672 241 LYLASDAG 248 (249)
Q Consensus 241 ~~l~s~~a 248 (249)
.||+++++
T Consensus 232 ~~l~s~~~ 239 (255)
T 3icc_A 232 AFLASPDS 239 (255)
T ss_dssp HHHHSGGG
T ss_pred HHHhCccc
Confidence 99999865
|
| >1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.4e-46 Score=301.98 Aligned_cols=226 Identities=29% Similarity=0.307 Sum_probs=198.5
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhC
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 88 (249)
++++|++|||||++|||++++++|+++|++|++++|+.++++++.+++ +.++.++.+|++|+++++++++++.+.++
T Consensus 2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 78 (254)
T 1hdc_A 2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL---GDAARYQHLDVTIEEDWQRVVAYAREEFG 78 (254)
T ss_dssp CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT---GGGEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCceeEEEecCCCHHHHHHHHHHHHHHcC
Confidence 468999999999999999999999999999999999988777766655 45688999999999999999999999999
Q ss_pred CccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchh
Q 025672 89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH 168 (249)
Q Consensus 89 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~ 168 (249)
++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|.+++. |+||++||..+..+.++...
T Consensus 79 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~--------g~iv~isS~~~~~~~~~~~~ 150 (254)
T 1hdc_A 79 SVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGG--------GSIVNISSAAGLMGLALTSS 150 (254)
T ss_dssp CCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--------EEEEEECCGGGTSCCTTCHH
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCC--------CEEEEECchhhccCCCCchh
Confidence 9999999999877777888899999999999999999999999999987653 89999999999998889999
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCC-CHHHHHHHHHHhccCC
Q 025672 169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFG-EKWDIAMAALYLASDA 247 (249)
Q Consensus 169 y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~dva~~v~~l~s~~ 247 (249)
|++||+++++|+++++.|++ ++||+||+|+||+++|++.... .+ ...+.+....|.+|+. +|+|+|++++||++++
T Consensus 151 Y~asK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~~-~~-~~~~~~~~~~p~~~~~~~~~dvA~~v~~l~s~~ 227 (254)
T 1hdc_A 151 YGASKWGVRGLSKLAAVELG-TDRIRVNSVHPGMTYTPMTAET-GI-RQGEGNYPNTPMGRVGNEPGEIAGAVVKLLSDT 227 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCCHHHHHH-TC-CCSTTSCTTSTTSSCB-CHHHHHHHHHHHHSGG
T ss_pred HHHHHHHHHHHHHHHHHHhh-hcCeEEEEEecccCcCcccccc-ch-hHHHHHHhcCCCCCCCCCHHHHHHHHHHHhCch
Confidence 99999999999999999998 8899999999999998753221 10 1112233446788899 9999999999999986
Q ss_pred C
Q 025672 248 G 248 (249)
Q Consensus 248 a 248 (249)
+
T Consensus 228 ~ 228 (254)
T 1hdc_A 228 S 228 (254)
T ss_dssp G
T ss_pred h
Confidence 4
|
| >1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-45 Score=299.55 Aligned_cols=226 Identities=31% Similarity=0.370 Sum_probs=199.7
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhC
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 88 (249)
++++|++|||||++|||++++++|+++|++|++++|+.++++++.+++ +.++.++++|++|+++++++++++.+.++
T Consensus 3 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 79 (253)
T 1hxh_A 3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL---GERSMFVRHDVSSEADWTLVMAAVQRRLG 79 (253)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH---CTTEEEECCCTTCHHHHHHHHHHHHHHHC
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---CCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 578999999999999999999999999999999999988888777776 56789999999999999999999999999
Q ss_pred CccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchh
Q 025672 89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH 168 (249)
Q Consensus 89 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~ 168 (249)
++|+||||||.....++.+.+.++|++.+++|+.+++.++++++|.|.++ +|+||++||..+..+.++...
T Consensus 80 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~---------~g~iv~isS~~~~~~~~~~~~ 150 (253)
T 1hxh_A 80 TLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKET---------GGSIINMASVSSWLPIEQYAG 150 (253)
T ss_dssp SCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT---------CEEEEEECCGGGTSCCTTBHH
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHc---------CCEEEEEcchhhcCCCCCCcc
Confidence 99999999998877788889999999999999999999999999999764 288999999999999899999
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCC--CeEEEEEecCccccccccCCCChHHHHHh-hhh---hhcccCCCCHHHHHHHHHH
Q 025672 169 VSAAKAAVDSITRSLALEWGTDY--AIRVNGIAPGPIKDTAGVSKLAPEEIRSK-ATD---YMAAYKFGEKWDIAMAALY 242 (249)
Q Consensus 169 y~~sK~a~~~l~~~la~e~~~~~--gi~v~~v~pG~v~t~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~dva~~v~~ 242 (249)
|++||+++++|+++++.|++ ++ ||+||+|+||+++|++......+ +..+. +.. ..|.+|+.+|+|+|++++|
T Consensus 151 Y~~sK~a~~~~~~~la~e~~-~~~~gi~v~~v~Pg~v~t~~~~~~~~~-~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~ 228 (253)
T 1hxh_A 151 YSASKAAVSALTRAAALSCR-KQGYAIRVNSIHPDGIYTPMMQASLPK-GVSKEMVLHDPKLNRAGRAYMPERIAQLVLF 228 (253)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-HHTCCEEEEEEEESEECCHHHHHHSCT-TCCHHHHBCBTTTBTTCCEECHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhh-hcCCCeEEEEEEeCCccCchhhhccch-hhhHHHHhhhhccCccCCCCCHHHHHHHHHH
Confidence 99999999999999999998 77 99999999999998764321111 11111 333 5678899999999999999
Q ss_pred hccCCC
Q 025672 243 LASDAG 248 (249)
Q Consensus 243 l~s~~a 248 (249)
|+++++
T Consensus 229 l~s~~~ 234 (253)
T 1hxh_A 229 LASDES 234 (253)
T ss_dssp HHSGGG
T ss_pred HcCccc
Confidence 999864
|
| >1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-45 Score=302.85 Aligned_cols=231 Identities=31% Similarity=0.447 Sum_probs=201.0
Q ss_pred CCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcch-HHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHH
Q 025672 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTV-LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN 85 (249)
Q Consensus 7 ~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 85 (249)
.+++++|++|||||++|||++++++|+++|++|++++|+.++ .+.+.+++...+.++.++.+|++|+++++++++++.+
T Consensus 24 ~~~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 103 (283)
T 1g0o_A 24 SASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVK 103 (283)
T ss_dssp GGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHH
Confidence 345789999999999999999999999999999999998754 5666777777777899999999999999999999999
Q ss_pred HhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCcc
Q 025672 86 HFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY 165 (249)
Q Consensus 86 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~ 165 (249)
.++++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|. . .|+||++||..+..+.++
T Consensus 104 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~--~--------~g~iv~isS~~~~~~~~~ 173 (283)
T 1g0o_A 104 IFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLE--I--------GGRLILMGSITGQAKAVP 173 (283)
T ss_dssp HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSC--T--------TCEEEEECCGGGTCSSCS
T ss_pred HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHh--c--------CCeEEEEechhhccCCCC
Confidence 999999999999988777788889999999999999999999999999982 2 389999999998877664
Q ss_pred -chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCC----C-----hHHHHHhhhh--hhcccCCCCH
Q 025672 166 -QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL----A-----PEEIRSKATD--YMAAYKFGEK 233 (249)
Q Consensus 166 -~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~----~-----~~~~~~~~~~--~~~~~~~~~~ 233 (249)
...|++||+++++|+++++.|++ ++||+||+|+||+++|++..... . .++..+.+.. ..|++|+++|
T Consensus 174 ~~~~Y~asK~a~~~~~~~la~e~~-~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p 252 (283)
T 1g0o_A 174 KHAVYSGSKGAIETFARCMAIDMA-DKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLP 252 (283)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCTTCSCBCH
T ss_pred CCcchHHHHHHHHHHHHHHHHHhc-ccCeEEEEEecCcccchhhhhhhhhccccccccCHHHHHHHHhhcCCCCCCCcCH
Confidence 88999999999999999999998 88999999999999987532210 0 1233344444 6788999999
Q ss_pred HHHHHHHHHhccCCC
Q 025672 234 WDIAMAALYLASDAG 248 (249)
Q Consensus 234 ~dva~~v~~l~s~~a 248 (249)
+|+|++++||+++++
T Consensus 253 ~dvA~~v~~l~s~~~ 267 (283)
T 1g0o_A 253 IDIARVVCFLASNDG 267 (283)
T ss_dssp HHHHHHHHHHHSGGG
T ss_pred HHHHHHHHHHhCccc
Confidence 999999999999865
|
| >2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-45 Score=299.49 Aligned_cols=230 Identities=24% Similarity=0.263 Sum_probs=199.2
Q ss_pred CCCCCCcEEEEecCC--CchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHH
Q 025672 7 GDILKGKVALLTGGG--SGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTI 84 (249)
Q Consensus 7 ~~~l~~k~~lItGa~--~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 84 (249)
.+++++|++|||||+ +|||++++++|+++|++|++++|+.+ .++..+++......+.++++|++|+++++++++++.
T Consensus 3 ~~~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~ 81 (261)
T 2wyu_A 3 TVDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAER-LRPEAEKLAEALGGALLFRADVTQDEELDALFAGVK 81 (261)
T ss_dssp EECCTTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGG-GHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHH
T ss_pred ccCCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHH-HHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHHHH
Confidence 456789999999999 99999999999999999999999875 444445554322347899999999999999999999
Q ss_pred HHhCCccEEEEcCCCCCC----CCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccc
Q 025672 85 NHFGKLDILVNAAAGNFL----VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY 160 (249)
Q Consensus 85 ~~~~~id~vi~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~ 160 (249)
+.++++|+||||||.... .++.+.+.++|++.+++|+.++++++++++|.|.+ +|+||++||..+.
T Consensus 82 ~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~----------~g~iv~isS~~~~ 151 (261)
T 2wyu_A 82 EAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLRE----------GGGIVTLTYYASE 151 (261)
T ss_dssp HHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE----------EEEEEEEECGGGT
T ss_pred HHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhcc----------CCEEEEEeccccc
Confidence 999999999999998653 56778899999999999999999999999998854 2889999999999
Q ss_pred ccCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHH
Q 025672 161 TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAA 240 (249)
Q Consensus 161 ~~~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v 240 (249)
.+.++...|++||+++++|+++++.|++ ++||+||+|+||+|+|++.......++..+.+....|.+|+.+|+|+|+++
T Consensus 152 ~~~~~~~~Y~asK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dva~~v 230 (261)
T 2wyu_A 152 KVVPKYNVMAIAKAALEASVRYLAYELG-PKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPLRRNITQEEVGNLG 230 (261)
T ss_dssp SBCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECCCCCTGGGGCTTHHHHHHHHHHHSTTSSCCCHHHHHHHH
T ss_pred CCCCCchHHHHHHHHHHHHHHHHHHHHh-hhCcEEEEEeeCCCcCchhhhccccHHHHHHHHhcCCCCCCCCHHHHHHHH
Confidence 8888899999999999999999999998 889999999999999876543333344555566678899999999999999
Q ss_pred HHhccCCC
Q 025672 241 LYLASDAG 248 (249)
Q Consensus 241 ~~l~s~~a 248 (249)
+||+++++
T Consensus 231 ~~l~s~~~ 238 (261)
T 2wyu_A 231 LFLLSPLA 238 (261)
T ss_dssp HHHHSGGG
T ss_pred HHHcChhh
Confidence 99998754
|
| >2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-45 Score=299.97 Aligned_cols=223 Identities=26% Similarity=0.363 Sum_probs=195.5
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhC
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 88 (249)
++++|+++||||++|||++++++|+++|++|++++|+.++++++.+++. .++.++.+|++|+++++++++++.+.++
T Consensus 3 ~l~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~D~~~~~~v~~~~~~~~~~~g 79 (263)
T 2a4k_A 3 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALE---AEAIAVVADVSDPKAVEAVFAEALEEFG 79 (263)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCC---SSEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc---CceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 4789999999999999999999999999999999999887777665553 5788999999999999999999999999
Q ss_pred CccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchh
Q 025672 89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH 168 (249)
Q Consensus 89 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~ 168 (249)
++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.| ++ . |+||++||..+. +.++...
T Consensus 80 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~-~~-~--------g~iv~isS~~~~-~~~~~~~ 148 (263)
T 2a4k_A 80 RLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVL-EE-G--------GSLVLTGSVAGL-GAFGLAH 148 (263)
T ss_dssp CCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHC-CT-T--------CEEEEECCCTTC-CHHHHHH
T ss_pred CCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHH-hc-C--------CEEEEEecchhc-CCCCcHH
Confidence 99999999998877788889999999999999999999999999999 43 2 889999999988 7788899
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhccCCC
Q 025672 169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAG 248 (249)
Q Consensus 169 y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~a 248 (249)
|++||+++.+|+++++.|++ ++||+||+|+||+++|++... .. ++..+.+....|.+|+.+|+|+|++++||+++++
T Consensus 149 Y~asK~a~~~~~~~la~e~~-~~gi~v~~v~PG~v~t~~~~~-~~-~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~~~ 225 (263)
T 2a4k_A 149 YAAGKLGVVGLARTLALELA-RKGVRVNVLLPGLIQTPMTAG-LP-PWAWEQEVGASPLGRAGRPEEVAQAALFLLSEES 225 (263)
T ss_dssp HHHCSSHHHHHHHHHHHHHT-TTTCEEEEEEECSBCCGGGTT-SC-HHHHHHHHHTSTTCSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHHHHHHHHHHHHHHHHhh-hhCcEEEEEEeCcCcCchhhh-cC-HHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccc
Confidence 99999999999999999998 889999999999999876433 22 3344455666788999999999999999999864
|
| >3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-45 Score=298.26 Aligned_cols=231 Identities=29% Similarity=0.381 Sum_probs=201.4
Q ss_pred CCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHH
Q 025672 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (249)
Q Consensus 7 ~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 86 (249)
.+++++|++|||||++|||++++++|+++|++|++++|+.+.++++.+++. .++.++++|++|+++++++++++.+.
T Consensus 7 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~D~~d~~~v~~~~~~~~~~ 83 (263)
T 3ak4_A 7 IFDLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLE---NGGFAVEVDVTKRASVDAAMQKAIDA 83 (263)
T ss_dssp TTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCT---TCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CcCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHh---cCCeEEEEeCCCHHHHHHHHHHHHHH
Confidence 345889999999999999999999999999999999999887776665543 26789999999999999999999999
Q ss_pred hCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccc
Q 025672 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ 166 (249)
Q Consensus 87 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~ 166 (249)
++++|+||||||.....++.+.+.++|+..+++|+.++++++++++|.|.++.. .|+||++||..+..+.++.
T Consensus 84 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~-------~g~iv~isS~~~~~~~~~~ 156 (263)
T 3ak4_A 84 LGGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNT-------KGVIVNTASLAAKVGAPLL 156 (263)
T ss_dssp HTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTC-------CCEEEEECCGGGTSCCTTC
T ss_pred cCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC-------CeEEEEecccccccCCCCc
Confidence 999999999999877777888899999999999999999999999999987541 2889999999999888889
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCC---------ChHHHHHhhhhhhcccCCCCHHHHH
Q 025672 167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL---------APEEIRSKATDYMAAYKFGEKWDIA 237 (249)
Q Consensus 167 ~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~dva 237 (249)
..|++||+++++|+++++.|++ ++||+||+|+||+++|++..... ..++..+.+....|.+|+.+|+|+|
T Consensus 157 ~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA 235 (263)
T 3ak4_A 157 AHYSASKFAVFGWTQALAREMA-PKNIRVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVSLTPLGRIEEPEDVA 235 (263)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECSBTTHHHHHHHHHHHHHHTSCHHHHHHHHHHTCTTCSCBCHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHh-HcCeEEEEEecccccChhhhhhccccccccccCcHHHHHHHHhcCCCCCCcCHHHHH
Confidence 9999999999999999999998 88999999999999987543211 1123334455667889999999999
Q ss_pred HHHHHhccCCC
Q 025672 238 MAALYLASDAG 248 (249)
Q Consensus 238 ~~v~~l~s~~a 248 (249)
++++||+++++
T Consensus 236 ~~v~~l~s~~~ 246 (263)
T 3ak4_A 236 DVVVFLASDAA 246 (263)
T ss_dssp HHHHHHHSGGG
T ss_pred HHHHHHhCccc
Confidence 99999999864
|
| >1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=8.4e-45 Score=299.73 Aligned_cols=229 Identities=27% Similarity=0.344 Sum_probs=190.9
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHH---HhcCCCeeEEEccCCCHHHHHHHHHHHHH
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAAL---HSLGIPAIGLEGDVRKREDAVRVVESTIN 85 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~---~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 85 (249)
.+++|++|||||++|||++++++|+++|++|++++|+.++++++.+++ ...+.++.++.+|++|+++++++++++.+
T Consensus 3 ~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 82 (278)
T 1spx_A 3 RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLG 82 (278)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHH
Confidence 467999999999999999999999999999999999998888888887 33345789999999999999999999999
Q ss_pred HhCCccEEEEcCCCCCCCCCCCC----CHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccc-c
Q 025672 86 HFGKLDILVNAAAGNFLVPAEDL----SPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH-Y 160 (249)
Q Consensus 86 ~~~~id~vi~~ag~~~~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~-~ 160 (249)
.++++|+||||||.....++.+. +.++|++.+++|+.++++++++++|.|.+++ |+||++||..+ .
T Consensus 83 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~---------g~iv~isS~~~~~ 153 (278)
T 1spx_A 83 KFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK---------GEIVNISSIASGL 153 (278)
T ss_dssp HHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT---------CEEEEECCTTSSS
T ss_pred HcCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC---------CeEEEEecccccc
Confidence 99999999999998766677777 8999999999999999999999999997652 88999999988 8
Q ss_pred ccCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCC-hHHH------HHhhhhhhcccCCCCH
Q 025672 161 TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA-PEEI------RSKATDYMAAYKFGEK 233 (249)
Q Consensus 161 ~~~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~-~~~~------~~~~~~~~~~~~~~~~ 233 (249)
.+.++...|++||+++++|+++++.|++ ++||+||+|+||+++|++...... .+.. .+.+....|.+|+.+|
T Consensus 154 ~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 232 (278)
T 1spx_A 154 HATPDFPYYSIAKAAIDQYTRNTAIDLI-QHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQP 232 (278)
T ss_dssp SCCTTSHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECCBCCCC--------------HHHHHHHHHHCTTSSCBCH
T ss_pred cCCCCccHHHHHHHHHHHHHHHHHHHHH-hcCcEEEEEecCcccCccccccccCchhhhhhhHHHHHHHhcCCCcCCCCH
Confidence 8888899999999999999999999998 889999999999999876433211 1111 3334455788899999
Q ss_pred HHHHHHHHHhccCC
Q 025672 234 WDIAMAALYLASDA 247 (249)
Q Consensus 234 ~dva~~v~~l~s~~ 247 (249)
+|+|++++||++++
T Consensus 233 ~dvA~~v~~l~s~~ 246 (278)
T 1spx_A 233 QDIAEVIAFLADRK 246 (278)
T ss_dssp HHHHHHHHHHHCHH
T ss_pred HHHHHHHHHHcCcc
Confidence 99999999999864
|
| >2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.7e-45 Score=299.27 Aligned_cols=228 Identities=24% Similarity=0.228 Sum_probs=199.0
Q ss_pred CCCCcEEEEecCC--CchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHH
Q 025672 9 ILKGKVALLTGGG--SGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (249)
Q Consensus 9 ~l~~k~~lItGa~--~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 86 (249)
++++|++|||||+ +|||++++++|+++|++|++++|+.+ .++..+++......+.++++|++|+++++++++++.+.
T Consensus 3 ~l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 81 (275)
T 2pd4_A 3 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKD 81 (275)
T ss_dssp TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHHH
Confidence 4789999999999 99999999999999999999999976 45555555433234789999999999999999999999
Q ss_pred hCCccEEEEcCCCCCC----CCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc
Q 025672 87 FGKLDILVNAAAGNFL----VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 162 (249)
Q Consensus 87 ~~~id~vi~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~ 162 (249)
++++|+||||||.... .++.+.+.++|+..+++|+.++++++++++|.|.+ +|+||++||..+..+
T Consensus 82 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~----------~g~iv~isS~~~~~~ 151 (275)
T 2pd4_A 82 LGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNN----------GASVLTLSYLGSTKY 151 (275)
T ss_dssp TSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE----------EEEEEEEECGGGTSB
T ss_pred cCCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc----------CCEEEEEecchhcCC
Confidence 9999999999998754 56778899999999999999999999999999864 288999999999988
Q ss_pred CccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHH
Q 025672 163 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALY 242 (249)
Q Consensus 163 ~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~ 242 (249)
.++...|++||+++.+|+++++.|++ ++||+||+|+||+|+|++.......++..+.+....|++|+.+|+|+|++++|
T Consensus 152 ~~~~~~Y~asK~a~~~~~~~la~e~~-~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dva~~~~~ 230 (275)
T 2pd4_A 152 MAHYNVMGLAKAALESAVRYLAVDLG-KHHIRVNALSAGPIRTLASSGIADFRMILKWNEINAPLRKNVSLEEVGNAGMY 230 (275)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHHHHH-TTTCEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHH
T ss_pred CCCchhhHHHHHHHHHHHHHHHHHhh-hcCeEEEEEeeCccccchhhhccccHHHHHHHHhcCCcCCCCCHHHHHHHHHH
Confidence 88999999999999999999999998 88999999999999987654333334455556667888999999999999999
Q ss_pred hccCCC
Q 025672 243 LASDAG 248 (249)
Q Consensus 243 l~s~~a 248 (249)
|+++++
T Consensus 231 l~s~~~ 236 (275)
T 2pd4_A 231 LLSSLS 236 (275)
T ss_dssp HHSGGG
T ss_pred HhCccc
Confidence 998754
|
| >2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-45 Score=297.82 Aligned_cols=224 Identities=24% Similarity=0.318 Sum_probs=186.5
Q ss_pred CCCCCCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHH
Q 025672 3 SPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVES 82 (249)
Q Consensus 3 ~~~~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~ 82 (249)
+|....++++|++|||||++|||++++++|+++|++|++++|+.++++ .+.++++|++|++++++++++
T Consensus 12 ~~~~~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~-----------~~~~~~~Dl~d~~~v~~~~~~ 80 (253)
T 2nm0_A 12 SGLVPRSHMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPE-----------GFLAVKCDITDTEQVEQAYKE 80 (253)
T ss_dssp --------CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT-----------TSEEEECCTTSHHHHHHHHHH
T ss_pred CCCCccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhhc-----------cceEEEecCCCHHHHHHHHHH
Confidence 567778899999999999999999999999999999999999876432 278899999999999999999
Q ss_pred HHHHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc
Q 025672 83 TINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 162 (249)
Q Consensus 83 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~ 162 (249)
+.+.++++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|.+++. |+||++||..+..+
T Consensus 81 ~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~--------g~iv~isS~~~~~~ 152 (253)
T 2nm0_A 81 IEETHGPVEVLIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKK--------GRVVLISSVVGLLG 152 (253)
T ss_dssp HHHHTCSCSEEEEECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTC--------EEEEEECCCCCCCC
T ss_pred HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--------CEEEEECchhhCCC
Confidence 9999999999999999887777888899999999999999999999999999987653 89999999999888
Q ss_pred CccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHH
Q 025672 163 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALY 242 (249)
Q Consensus 163 ~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~ 242 (249)
.++...|+++|+++.+|+++++.|++ ++||+||+|+||+++|++... .. ++..+.+....|.+|+.+|+|+|++++|
T Consensus 153 ~~~~~~Y~asK~a~~~~~~~la~e~~-~~gi~vn~v~PG~v~T~~~~~-~~-~~~~~~~~~~~p~~~~~~p~dvA~~i~~ 229 (253)
T 2nm0_A 153 SAGQANYAASKAGLVGFARSLARELG-SRNITFNVVAPGFVDTDMTKV-LT-DEQRANIVSQVPLGRYARPEEIAATVRF 229 (253)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHC-SSSEEEEEEEECSBCC-----------CHHHHHTTCTTCSCBCHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHhh-hcCeEEEEEEeCcCcCcchhh-cC-HHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence 88889999999999999999999998 899999999999999876432 21 2222334456788899999999999999
Q ss_pred hccCCC
Q 025672 243 LASDAG 248 (249)
Q Consensus 243 l~s~~a 248 (249)
|+++++
T Consensus 230 l~s~~~ 235 (253)
T 2nm0_A 230 LASDDA 235 (253)
T ss_dssp HHSGGG
T ss_pred HhCccc
Confidence 999864
|
| >3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-45 Score=299.77 Aligned_cols=230 Identities=26% Similarity=0.343 Sum_probs=187.6
Q ss_pred CCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHH
Q 025672 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (249)
Q Consensus 7 ~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 86 (249)
.+++++|++|||||++|||++++++|+++|++|++++|+.++ ..++ .+.++.++++|++|+++++++++.+.+
T Consensus 4 ~m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~---~~~~---~~~~~~~~~~D~~~~~~v~~~~~~~~~- 76 (257)
T 3tl3_A 4 SMEIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGED---VVAD---LGDRARFAAADVTDEAAVASALDLAET- 76 (257)
T ss_dssp ------CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCHH---HHHH---TCTTEEEEECCTTCHHHHHHHHHHHHH-
T ss_pred cceecCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHH---HHHh---cCCceEEEECCCCCHHHHHHHHHHHHH-
Confidence 467899999999999999999999999999999999996543 2222 356899999999999999999998877
Q ss_pred hCCccEEEEcCCCCCCC----CCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc
Q 025672 87 FGKLDILVNAAAGNFLV----PAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 162 (249)
Q Consensus 87 ~~~id~vi~~ag~~~~~----~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~ 162 (249)
++++|++|||||..... +..+.+.++|++.+++|+.++++++++++|.|.+..........+|+||++||..+..+
T Consensus 77 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~ 156 (257)
T 3tl3_A 77 MGTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDG 156 (257)
T ss_dssp HSCEEEEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--CC
T ss_pred hCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhcCC
Confidence 99999999999976432 23457899999999999999999999999999874221111123589999999999999
Q ss_pred CccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcc-cCCCCHHHHHHHHH
Q 025672 163 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAA-YKFGEKWDIAMAAL 241 (249)
Q Consensus 163 ~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~v~ 241 (249)
.++...|++||+|+.+|+++++.|++ ++||+||+|+||+|+|++... . +++..+.+....|. +|+++|||+|++++
T Consensus 157 ~~~~~~Y~asKaa~~~~~~~la~e~~-~~gI~vn~v~PG~v~T~~~~~-~-~~~~~~~~~~~~~~~~r~~~p~dva~~v~ 233 (257)
T 3tl3_A 157 QIGQAAYSASKGGVVGMTLPIARDLA-SHRIRVMTIAPGLFDTPLLAS-L-PEEARASLGKQVPHPSRLGNPDEYGALAV 233 (257)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCCTTC-----CHHHHHHHHHTSSSSCSCBCHHHHHHHHH
T ss_pred CCCCccHHHHHHHHHHHHHHHHHHhc-ccCcEEEEEEecCccChhhhh-c-cHHHHHHHHhcCCCCCCccCHHHHHHHHH
Confidence 99999999999999999999999998 889999999999999876433 2 34455566677787 99999999999999
Q ss_pred HhccC
Q 025672 242 YLASD 246 (249)
Q Consensus 242 ~l~s~ 246 (249)
||+++
T Consensus 234 ~l~s~ 238 (257)
T 3tl3_A 234 HIIEN 238 (257)
T ss_dssp HHHHC
T ss_pred HHhcC
Confidence 99986
|
| >2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-44 Score=298.17 Aligned_cols=228 Identities=25% Similarity=0.249 Sum_probs=197.6
Q ss_pred CCCcEEEEecCC--CchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 10 LKGKVALLTGGG--SGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 10 l~~k~~lItGa~--~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
+++|++|||||+ +|||++++++|+++|++|++++|+.+ .++..+++......+.++.+|++|+++++++++++.+.+
T Consensus 19 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 97 (285)
T 2p91_A 19 LEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPK-LEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLEENW 97 (285)
T ss_dssp TTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGG-GHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHT
T ss_pred cCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 789999999999 99999999999999999999999875 455555554332347899999999999999999999999
Q ss_pred CCccEEEEcCCCCCC----CCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC
Q 025672 88 GKLDILVNAAAGNFL----VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT 163 (249)
Q Consensus 88 ~~id~vi~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~ 163 (249)
+++|+||||||.... .++.+.+.++|+..+++|+.++++++++++|.|.++ +|+||++||..+..+.
T Consensus 98 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~---------~g~iv~isS~~~~~~~ 168 (285)
T 2p91_A 98 GSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGR---------NGAIVTLSYYGAEKVV 168 (285)
T ss_dssp SCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTS---------CCEEEEEECGGGTSBC
T ss_pred CCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc---------CCEEEEEccchhccCC
Confidence 999999999998753 567788999999999999999999999999998643 3899999999999888
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHh
Q 025672 164 WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYL 243 (249)
Q Consensus 164 ~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l 243 (249)
++...|++||+++++|+++++.|++ ++||+||+|+||+|+|++.......+...+.+....|++|+.+|+|+|++++||
T Consensus 169 ~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dva~~~~~l 247 (285)
T 2p91_A 169 PHYNVMGIAKAALESTVRYLAYDIA-KHGHRINAISAGPVKTLAAYSITGFHLLMEHTTKVNPFGKPITIEDVGDTAVFL 247 (285)
T ss_dssp TTTTHHHHHHHHHHHHHHHHHHHHH-TTTCEEEEEEECCCCCSCC--CTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHH
T ss_pred CCccHHHHHHHHHHHHHHHHHHHhc-ccCcEEEEEEeCcccCchhhcccchHHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence 8899999999999999999999998 889999999999999876543222344455566677889999999999999999
Q ss_pred ccCCC
Q 025672 244 ASDAG 248 (249)
Q Consensus 244 ~s~~a 248 (249)
+++++
T Consensus 248 ~s~~~ 252 (285)
T 2p91_A 248 CSDWA 252 (285)
T ss_dssp TSGGG
T ss_pred cCCcc
Confidence 98754
|
| >3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-44 Score=303.15 Aligned_cols=221 Identities=26% Similarity=0.319 Sum_probs=198.4
Q ss_pred CCCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcch-------HHHHHHHHHhcCCCeeEEEccCCCHHHHHH
Q 025672 6 KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTV-------LRSAVAALHSLGIPAIGLEGDVRKREDAVR 78 (249)
Q Consensus 6 ~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~-------~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~ 78 (249)
....+++|++|||||++|||++++++|+++|++|++++|+.++ +++..+++...+.++.++.+|++|++++++
T Consensus 39 ~~~~l~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~ 118 (346)
T 3kvo_A 39 NTGRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISA 118 (346)
T ss_dssp CCSTTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHH
T ss_pred cCCCCCCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHH
Confidence 4456899999999999999999999999999999999998775 567788888888899999999999999999
Q ss_pred HHHHHHHHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccc
Q 025672 79 VVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL 158 (249)
Q Consensus 79 ~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~ 158 (249)
+++++.+.++++|+||||||+....++.+.+.++|++++++|+.++++++++++|.|++++. |+||++||..
T Consensus 119 ~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~--------g~IV~iSS~~ 190 (346)
T 3kvo_A 119 AVEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKV--------AHILNISPPL 190 (346)
T ss_dssp HHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSS--------CEEEEECCCC
T ss_pred HHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCC--------CEEEEECCHH
Confidence 99999999999999999999988888899999999999999999999999999999987653 8999999999
Q ss_pred cccc--CccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCc-cccccccCCCChHHHHHhhhhhhcccCCCCHHH
Q 025672 159 HYTA--TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP-IKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWD 235 (249)
Q Consensus 159 ~~~~--~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 235 (249)
+..+ .++...|++||+++.+|+++++.|++ .||+||+|+||+ ++|++ .+.+....+.+|+.+|+|
T Consensus 191 ~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~--~gIrvn~v~PG~~i~T~~----------~~~~~~~~~~~r~~~ped 258 (346)
T 3kvo_A 191 NLNPVWFKQHCAYTIAKYGMSMYVLGMAEEFK--GEIAVNALWPKTAIHTAA----------MDMLGGPGIESQCRKVDI 258 (346)
T ss_dssp CCCGGGTSSSHHHHHHHHHHHHHHHHHHHHTT--TTCEEEEEECSBCBCCHH----------HHHHCC--CGGGCBCTHH
T ss_pred HcCCCCCCCchHHHHHHHHHHHHHHHHHHHhc--CCcEEEEEeCCCccccHH----------HHhhccccccccCCCHHH
Confidence 8877 67889999999999999999999996 699999999995 87642 223344456788999999
Q ss_pred HHHHHHHhccC
Q 025672 236 IAMAALYLASD 246 (249)
Q Consensus 236 va~~v~~l~s~ 246 (249)
+|++++||+++
T Consensus 259 vA~~v~~L~s~ 269 (346)
T 3kvo_A 259 IADAAYSIFQK 269 (346)
T ss_dssp HHHHHHHHHTS
T ss_pred HHHHHHHHHhc
Confidence 99999999998
|
| >2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-44 Score=294.31 Aligned_cols=222 Identities=23% Similarity=0.315 Sum_probs=179.7
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
|++++|++|||||++|||++++++|+++|++|++++|+.+. ... .+.++.+|++|+++++++++++.+.+
T Consensus 3 m~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~--------~~~--~~~~~~~D~~d~~~~~~~~~~~~~~~ 72 (250)
T 2fwm_X 3 MDFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ--------EQY--PFATEVMDVADAAQVAQVCQRLLAET 72 (250)
T ss_dssp CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCS--------SCC--SSEEEECCTTCHHHHHHHHHHHHHHC
T ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhh--------hcC--CceEEEcCCCCHHHHHHHHHHHHHHc
Confidence 45789999999999999999999999999999999998752 111 27889999999999999999999999
Q ss_pred CCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch
Q 025672 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 167 (249)
Q Consensus 88 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~ 167 (249)
+++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|.+++. |+||++||..+..+.++..
T Consensus 73 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~--------g~iv~isS~~~~~~~~~~~ 144 (250)
T 2fwm_X 73 ERLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRG--------GAIVTVASDAAHTPRIGMS 144 (250)
T ss_dssp SCCCEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--------CEEEEECCGGGTSCCTTCH
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcCC--------CEEEEECchhhCCCCCCCc
Confidence 99999999999887778888999999999999999999999999999987653 8999999999999988999
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHH-hhhh-------hhcccCCCCHHHHHHH
Q 025672 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRS-KATD-------YMAAYKFGEKWDIAMA 239 (249)
Q Consensus 168 ~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~-~~~~-------~~~~~~~~~~~dva~~ 239 (249)
.|+++|+++++|+++++.|++ ++||+||+|+||+++|++.......++..+ .+.. ..|.+|+.+|+|+|++
T Consensus 145 ~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~ 223 (250)
T 2fwm_X 145 AYGASKAALKSLALSVGLELA-GSGVRCNVVSPGSTDTDMQRTLWVSDDAEEQRIRGFGEQFKLGIPLGKIARPQEIANT 223 (250)
T ss_dssp HHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECCC------------------------------------CHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHhC-ccCCEEEEEECCcccCccccccccChhHHHHHHhhhhhcccccCCCCCCcCHHHHHHH
Confidence 999999999999999999998 889999999999999876433211112122 2222 5688899999999999
Q ss_pred HHHhccCCC
Q 025672 240 ALYLASDAG 248 (249)
Q Consensus 240 v~~l~s~~a 248 (249)
++||+++++
T Consensus 224 v~~l~s~~~ 232 (250)
T 2fwm_X 224 ILFLASDLA 232 (250)
T ss_dssp HHHHHSGGG
T ss_pred HHHHhCccc
Confidence 999999864
|
| >3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-44 Score=291.94 Aligned_cols=236 Identities=27% Similarity=0.342 Sum_probs=208.2
Q ss_pred CCCCCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHH
Q 025672 4 PFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVEST 83 (249)
Q Consensus 4 ~~~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 83 (249)
++..+++++|++|||||++|||++++++|+++|++|++++|+.+.++.+.+++...+.++.++.+|++|+++++++++++
T Consensus 5 ~~~~~~l~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~ 84 (260)
T 3awd_A 5 YMEKLRLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSV 84 (260)
T ss_dssp TTGGGCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred cccccCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHH
Confidence 35566789999999999999999999999999999999999998888888888777778999999999999999999999
Q ss_pred HHHhCCccEEEEcCCCCC-CCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc
Q 025672 84 INHFGKLDILVNAAAGNF-LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 162 (249)
Q Consensus 84 ~~~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~ 162 (249)
.+.++++|+||||||... ..++.+.+.++|++.+++|+.+++++++++.|.|.+++. ++||++||..+..+
T Consensus 85 ~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~--------~~iv~~sS~~~~~~ 156 (260)
T 3awd_A 85 HEQEGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQ--------GVIVAIGSMSGLIV 156 (260)
T ss_dssp HHHHSCCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--------EEEEEECCGGGTSC
T ss_pred HHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCC--------CEEEEEecchhccc
Confidence 999999999999999876 667888899999999999999999999999999987543 89999999988877
Q ss_pred Cccc--hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHH
Q 025672 163 TWYQ--IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAA 240 (249)
Q Consensus 163 ~~~~--~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v 240 (249)
.++. ..|+++|++++.|+++++.|++ ++||++++|+||+++|++.......+...+.+....|.+++.+|+|+|+++
T Consensus 157 ~~~~~~~~Y~~sK~a~~~~~~~l~~e~~-~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~ 235 (260)
T 3awd_A 157 NRPQQQAAYNASKAGVHQYIRSLAAEWA-PHGIRANAVAPTYIETTLTRFGMEKPELYDAWIAGTPMGRVGQPDEVASVV 235 (260)
T ss_dssp CSSSCCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECCBCCTTTHHHHTCHHHHHHHHHTCTTSSCBCHHHHHHHH
T ss_pred CCCCCccccHHHHHHHHHHHHHHHHHhh-hcCeEEEEEEeeeeccchhhcccCChHHHHHHHhcCCcCCCCCHHHHHHHH
Confidence 7766 8999999999999999999998 889999999999999876541222234444555667888999999999999
Q ss_pred HHhccCCC
Q 025672 241 LYLASDAG 248 (249)
Q Consensus 241 ~~l~s~~a 248 (249)
.||+++++
T Consensus 236 ~~l~~~~~ 243 (260)
T 3awd_A 236 QFLASDAA 243 (260)
T ss_dssp HHHHSGGG
T ss_pred HHHhCchh
Confidence 99998753
|
| >3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-44 Score=295.62 Aligned_cols=230 Identities=23% Similarity=0.293 Sum_probs=192.2
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcch-HHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHH
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTV-LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 86 (249)
+++.+|++|||||++|||++++++|+++|++|++++|+... .+.+.+.+...+.++.++++|++|+++++++++++.+.
T Consensus 3 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 82 (264)
T 3i4f_A 3 LGRFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSH 82 (264)
T ss_dssp ---CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred cccccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence 34567999999999999999999999999999999777554 45555655666678999999999999999999999999
Q ss_pred hCCccEEEEcCC--CCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccc-cc-ccc
Q 025672 87 FGKLDILVNAAA--GNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISAT-LH-YTA 162 (249)
Q Consensus 87 ~~~id~vi~~ag--~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~-~~-~~~ 162 (249)
++++|+|||||| .....++.+.+.++|++.+++|+.++++++++++|.|.+++. ++||++||. .+ ..+
T Consensus 83 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~--------g~iv~iss~~~~~~~~ 154 (264)
T 3i4f_A 83 FGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQNF--------GRIINYGFQGADSAPG 154 (264)
T ss_dssp HSCCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--------EEEEEECCTTGGGCCC
T ss_pred hCCCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCC--------CeEEEEeechhcccCC
Confidence 999999999999 445567788899999999999999999999999999987753 899999987 44 556
Q ss_pred CccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHH
Q 025672 163 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALY 242 (249)
Q Consensus 163 ~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~ 242 (249)
.++...|++||+|+.+|+++++.|++ ++||+||+|+||+++|++.... .++..+......|.+|+++|+|+|++++|
T Consensus 155 ~~~~~~Y~asKaa~~~~~~~la~e~~-~~gi~v~~v~PG~v~t~~~~~~--~~~~~~~~~~~~p~~r~~~~~dva~~v~~ 231 (264)
T 3i4f_A 155 WIYRSAFAAAKVGLVSLTKTVAYEEA-EYGITANMVCPGDIIGEMKEAT--IQEARQLKEHNTPIGRSGTGEDIARTISF 231 (264)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECCCCGGGGSCC--HHHHHHC--------CCCCHHHHHHHHHH
T ss_pred CCCCchhHHHHHHHHHHHHHHHHHhh-hcCcEEEEEccCCccCccchhc--cHHHHHHHhhcCCCCCCcCHHHHHHHHHH
Confidence 67789999999999999999999998 8899999999999998764332 34455566677899999999999999999
Q ss_pred hccCCC
Q 025672 243 LASDAG 248 (249)
Q Consensus 243 l~s~~a 248 (249)
|+++.+
T Consensus 232 l~s~~~ 237 (264)
T 3i4f_A 232 LCEDDS 237 (264)
T ss_dssp HHSGGG
T ss_pred HcCccc
Confidence 999864
|
| >1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-44 Score=293.38 Aligned_cols=221 Identities=30% Similarity=0.379 Sum_probs=197.7
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhC
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 88 (249)
.+++|++|||||++|||++++++|+++|++|++++|+.++++++.+++.. ++.++++|++|+++++++++++.+.++
T Consensus 4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~D~~~~~~v~~~~~~~~~~~g 80 (260)
T 1nff_A 4 RLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELAD---AARYVHLDVTQPAQWKAAVDTAVTAFG 80 (260)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGG---GEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhc---CceEEEecCCCHHHHHHHHHHHHHHcC
Confidence 47899999999999999999999999999999999998888777766643 488999999999999999999999999
Q ss_pred CccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchh
Q 025672 89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH 168 (249)
Q Consensus 89 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~ 168 (249)
++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|.+++. |+||++||..+..+.++...
T Consensus 81 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~--------g~iv~isS~~~~~~~~~~~~ 152 (260)
T 1nff_A 81 GLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGR--------GSIINISSIEGLAGTVACHG 152 (260)
T ss_dssp CCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--------EEEEEECCGGGTSCCTTBHH
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC--------CEEEEEeehhhcCCCCCchh
Confidence 9999999999887778888999999999999999999999999999987643 89999999999999888999
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhccCCC
Q 025672 169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAG 248 (249)
Q Consensus 169 y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~a 248 (249)
|++||+++++|+++++.|++ ++||+||+|+||+++|++.. ..++ .+. ..|.+|+.+|+|+|++++||+++++
T Consensus 153 Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~--~~~~----~~~-~~~~~~~~~~~dvA~~v~~l~s~~~ 224 (260)
T 1nff_A 153 YTATKFAVRGLTKSTALELG-PSGIRVNSIHPGLVKTPMTD--WVPE----DIF-QTALGRAAEPVEVSNLVVYLASDES 224 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECCBCSGGGT--TSCT----TCS-CCSSSSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHHHHHHHHHHHHHHHHhC-ccCcEEEEEEeCCCCCCccc--cchh----hHH-hCccCCCCCHHHHHHHHHHHhCccc
Confidence 99999999999999999998 88999999999999987643 1111 111 4578899999999999999998754
|
| >4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-44 Score=296.76 Aligned_cols=233 Identities=26% Similarity=0.365 Sum_probs=194.8
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEE-eCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIM-GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~-~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
+.++|++|||||++|||+++|++|+++|++|+++ .|+.+.++.+.+++...+.++.++.+|++|+++++++++++.+.+
T Consensus 23 m~~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 102 (272)
T 4e3z_A 23 MSDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQF 102 (272)
T ss_dssp -CCSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhC
Confidence 3468999999999999999999999999999876 778888888888888878899999999999999999999999999
Q ss_pred CCccEEEEcCCCCCC-CCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCc-c
Q 025672 88 GKLDILVNAAAGNFL-VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW-Y 165 (249)
Q Consensus 88 ~~id~vi~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~-~ 165 (249)
+++|+||||||.... .++.+.+.++|++.+++|+.++++++++++|.|.+.... .+|+||++||..+..+.+ +
T Consensus 103 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~~~~~~ 177 (272)
T 4e3z_A 103 GRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSG-----QGGAIVNVSSMAAILGSATQ 177 (272)
T ss_dssp SCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTC-----CCEEEEEECCTHHHHCCTTT
T ss_pred CCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccC-----CCCEEEEEcchHhccCCCCC
Confidence 999999999998764 778888999999999999999999999999999764211 148999999999887765 6
Q ss_pred chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhcc
Q 025672 166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245 (249)
Q Consensus 166 ~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s 245 (249)
...|++||+|+++|+++++.|++ ++||+|++|+||+|+|++.... ..++..+.+....|.+|+++|+|+|++++||++
T Consensus 178 ~~~Y~asKaa~~~~~~~la~e~~-~~gi~v~~v~PG~v~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~s 255 (272)
T 4e3z_A 178 YVDYAASKAAIDTFTIGLAREVA-AEGIRVNAVRPGIIETDLHASG-GLPDRAREMAPSVPMQRAGMPEEVADAILYLLS 255 (272)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBC-------------------CCTTSSCBCHHHHHHHHHHHHS
T ss_pred cchhHHHHHHHHHHHHHHHHHHH-HcCcEEEEEecCCCcCCccccc-CChHHHHHHhhcCCcCCCcCHHHHHHHHHHHhC
Confidence 78899999999999999999998 8899999999999998765442 223344556667888999999999999999998
Q ss_pred CCC
Q 025672 246 DAG 248 (249)
Q Consensus 246 ~~a 248 (249)
+++
T Consensus 256 ~~~ 258 (272)
T 4e3z_A 256 PSA 258 (272)
T ss_dssp GGG
T ss_pred Ccc
Confidence 764
|
| >1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-44 Score=296.22 Aligned_cols=227 Identities=21% Similarity=0.215 Sum_probs=196.6
Q ss_pred CCCcEEEEecCC--CchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 10 LKGKVALLTGGG--SGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 10 l~~k~~lItGa~--~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
+++|++|||||+ +|||++++++|+++|++|++++|+. +.++..+++........++++|++|+++++++++++.+.+
T Consensus 7 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 85 (265)
T 1qsg_A 7 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVW 85 (265)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESST-TTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTC
T ss_pred cCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHHHHc
Confidence 789999999999 9999999999999999999999987 4555555554332335889999999999999999999999
Q ss_pred CCccEEEEcCCCCCC----CCCCC-CCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc
Q 025672 88 GKLDILVNAAAGNFL----VPAED-LSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 162 (249)
Q Consensus 88 ~~id~vi~~ag~~~~----~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~ 162 (249)
+++|+||||||.... .++.+ .+.++|++.+++|+.++++++++++|.|.+ +|+||++||..+..+
T Consensus 86 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~----------~g~iv~isS~~~~~~ 155 (265)
T 1qsg_A 86 PKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP----------GSALLTLSYLGAERA 155 (265)
T ss_dssp SSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE----------EEEEEEEECGGGTSB
T ss_pred CCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc----------CCEEEEEcchhhccC
Confidence 999999999998653 55666 889999999999999999999999999864 288999999999988
Q ss_pred CccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHH
Q 025672 163 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALY 242 (249)
Q Consensus 163 ~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~ 242 (249)
.++...|++||+++++|+++++.|++ ++||+||+|+||+++|++.......+...+.+....|++|+.+|+|+|++++|
T Consensus 156 ~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dva~~v~~ 234 (265)
T 1qsg_A 156 IPNYNVMGLAKASLEANVRYMANAMG-PEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAF 234 (265)
T ss_dssp CTTTTHHHHHHHHHHHHHHHHHHHHT-TTTEEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHH
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHhh-hcCeEEEEEEeCCCccchhhcccccHHHHHHHHhcCCCCCCCCHHHHHHHHHH
Confidence 88899999999999999999999998 88999999999999987654332334445555666788999999999999999
Q ss_pred hccCCC
Q 025672 243 LASDAG 248 (249)
Q Consensus 243 l~s~~a 248 (249)
|+++++
T Consensus 235 l~s~~~ 240 (265)
T 1qsg_A 235 LCSDLS 240 (265)
T ss_dssp HTSGGG
T ss_pred HhCchh
Confidence 998754
|
| >1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-44 Score=296.05 Aligned_cols=225 Identities=32% Similarity=0.451 Sum_probs=195.9
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
..+++|++|||||++|||++++++|+++|++|++++|+.+.++.+.+++. ++.++++|++|+++++++++++.+.+
T Consensus 5 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~Dv~d~~~v~~~~~~~~~~~ 80 (270)
T 1yde_A 5 TRYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELP----GAVFILCDVTQEDDVKTLVSETIRRF 80 (270)
T ss_dssp CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCT----TEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc----CCeEEEcCCCCHHHHHHHHHHHHHHc
Confidence 45789999999999999999999999999999999999887777666552 47899999999999999999999999
Q ss_pred CCccEEEEcCCCCC-CCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccc
Q 025672 88 GKLDILVNAAAGNF-LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ 166 (249)
Q Consensus 88 ~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~ 166 (249)
+++|+||||||... ..++.+.+.++|++.+++|+.++++++++++|.|.++ +|+||++||..+..+.++.
T Consensus 81 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~---------~g~iv~isS~~~~~~~~~~ 151 (270)
T 1yde_A 81 GRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS---------QGNVINISSLVGAIGQAQA 151 (270)
T ss_dssp SCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH---------TCEEEEECCHHHHHCCTTC
T ss_pred CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHC---------CCEEEEEcCccccCCCCCC
Confidence 99999999999865 3677788999999999999999999999999999764 2889999999988888889
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCC---C-ChHHHHHhhhhhhcccCCCCHHHHHHHHHH
Q 025672 167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK---L-APEEIRSKATDYMAAYKFGEKWDIAMAALY 242 (249)
Q Consensus 167 ~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~dva~~v~~ 242 (249)
..|+++|+++++|+++++.|++ ++||+||+|+||+++|++.... . .............|++|+++|+|+|++++|
T Consensus 152 ~~Y~asKaa~~~~~~~la~e~~-~~gi~vn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~~ 230 (270)
T 1yde_A 152 VPYVATKGAVTAMTKALALDES-PYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPLGRMGQPAEVGAAAVF 230 (270)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTSTTSSCBCHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHHHHhh-hhCcEEEEEEeCccccchhhhhhhcccchHHHHHHHhhcCCCCCCcCHHHHHHHHHH
Confidence 9999999999999999999998 8899999999999998753221 1 111112223345788999999999999999
Q ss_pred hccC
Q 025672 243 LASD 246 (249)
Q Consensus 243 l~s~ 246 (249)
|+|+
T Consensus 231 L~s~ 234 (270)
T 1yde_A 231 LASE 234 (270)
T ss_dssp HHHH
T ss_pred Hccc
Confidence 9987
|
| >3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-44 Score=303.79 Aligned_cols=234 Identities=24% Similarity=0.326 Sum_probs=200.1
Q ss_pred CCCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCC----------cchHHHHHHHHHhcCCCeeEEEccCCCHHH
Q 025672 6 KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR----------KTVLRSAVAALHSLGIPAIGLEGDVRKRED 75 (249)
Q Consensus 6 ~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~----------~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~ 75 (249)
....+++|++|||||++|||+++|++|+++|++|++++|+ .+.++++.+++...+.++.++.+|++|+++
T Consensus 21 ~m~~l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~ 100 (322)
T 3qlj_A 21 SMGVVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQ 100 (322)
T ss_dssp -CCTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHH
T ss_pred hhcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHH
Confidence 3445889999999999999999999999999999999998 677888899998888889999999999999
Q ss_pred HHHHHHHHHHHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEec
Q 025672 76 AVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINIS 155 (249)
Q Consensus 76 ~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~is 155 (249)
++++++++.+.++++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|.+..... ...+|+||++|
T Consensus 101 v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~--~~~~g~IV~is 178 (322)
T 3qlj_A 101 AAGLIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAG--KAVDGRIINTS 178 (322)
T ss_dssp HHHHHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT--CCCCEEEEEEC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccC--CCCCcEEEEEc
Confidence 9999999999999999999999998888888999999999999999999999999999997532100 01137999999
Q ss_pred cccccccCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHH
Q 025672 156 ATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWD 235 (249)
Q Consensus 156 s~~~~~~~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 235 (249)
|..+..+.++...|++||+|+.+|+++++.|++ ++||+||+|+|| +.|++....... ... ...+..+..+|+|
T Consensus 179 S~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~-~~gI~vn~v~PG-~~t~~~~~~~~~-~~~----~~~~~~~~~~ped 251 (322)
T 3qlj_A 179 SGAGLQGSVGQGNYSAAKAGIATLTLVGAAEMG-RYGVTVNAIAPS-ARTRMTETVFAE-MMA----TQDQDFDAMAPEN 251 (322)
T ss_dssp CHHHHHCBTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEEC-TTSCCSCCSCCC-------------CCTTCGGG
T ss_pred CHHHccCCCCCccHHHHHHHHHHHHHHHHHHhc-ccCcEEEEecCC-CCCccchhhhhh-hhh----ccccccCCCCHHH
Confidence 999999999999999999999999999999998 899999999999 887765443322 111 1122235679999
Q ss_pred HHHHHHHhccCCC
Q 025672 236 IAMAALYLASDAG 248 (249)
Q Consensus 236 va~~v~~l~s~~a 248 (249)
+|++++||+|+++
T Consensus 252 va~~v~~L~s~~~ 264 (322)
T 3qlj_A 252 VSPLVVWLGSAEA 264 (322)
T ss_dssp THHHHHHHTSGGG
T ss_pred HHHHHHHHhCccc
Confidence 9999999999875
|
| >2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-44 Score=293.90 Aligned_cols=221 Identities=22% Similarity=0.302 Sum_probs=195.2
Q ss_pred CCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHH
Q 025672 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (249)
Q Consensus 7 ~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 86 (249)
.+++++|++|||||++|||++++++|+++|++|++++|+.+. +.++.++++|++|+++++++++++.+.
T Consensus 3 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-----------~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 71 (264)
T 2dtx_A 3 FSDLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG-----------EAKYDHIECDVTNPDQVKASIDHIFKE 71 (264)
T ss_dssp CGGGTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC-----------SCSSEEEECCTTCHHHHHHHHHHHHHH
T ss_pred ccccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc-----------CCceEEEEecCCCHHHHHHHHHHHHHH
Confidence 345789999999999999999999999999999999998764 457889999999999999999999999
Q ss_pred hCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccc
Q 025672 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ 166 (249)
Q Consensus 87 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~ 166 (249)
++++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|.+++ .|+||++||..+..+.++.
T Consensus 72 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~~~ 143 (264)
T 2dtx_A 72 YGSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSR--------DPSIVNISSVQASIITKNA 143 (264)
T ss_dssp HSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSS--------SCEEEEECCGGGTSCCTTB
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC--------CcEEEEECCchhccCCCCc
Confidence 99999999999988777888899999999999999999999999999998764 3899999999999998999
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCC------ChH---HHHHhhhhhhcccCCCCHHHHH
Q 025672 167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL------APE---EIRSKATDYMAAYKFGEKWDIA 237 (249)
Q Consensus 167 ~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~------~~~---~~~~~~~~~~~~~~~~~~~dva 237 (249)
..|++||+++++|+++++.|++ +. |+||+|+||+++|++..... .+. +..+.+....|.+|+.+|+|+|
T Consensus 144 ~~Y~~sK~a~~~~~~~la~e~~-~~-i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA 221 (264)
T 2dtx_A 144 SAYVTSKHAVIGLTKSIALDYA-PL-LRCNAVCPATIDTPLVRKAAELEVGSDPMRIEKKISEWGHEHPMQRIGKPQEVA 221 (264)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHT-TT-SEEEEEEECSBCSHHHHHHHHHHHCSCHHHHHHHHHHHHHHSTTSSCBCHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHhc-CC-cEEEEEEeCCCcCcchhhhhhcccccCchhhHHHHHHHHhcCCCCCCcCHHHHH
Confidence 9999999999999999999998 77 99999999999987543210 110 3334445567889999999999
Q ss_pred HHHHHhccCCC
Q 025672 238 MAALYLASDAG 248 (249)
Q Consensus 238 ~~v~~l~s~~a 248 (249)
++++||+++++
T Consensus 222 ~~v~~l~s~~~ 232 (264)
T 2dtx_A 222 SAVAFLASREA 232 (264)
T ss_dssp HHHHHHHSGGG
T ss_pred HHHHHHhCchh
Confidence 99999999864
|
| >1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-44 Score=292.82 Aligned_cols=234 Identities=26% Similarity=0.356 Sum_probs=180.7
Q ss_pred CCCCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHH
Q 025672 5 FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTI 84 (249)
Q Consensus 5 ~~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 84 (249)
...+.+++|++|||||++|||++++++|+++|++|++++|+.++++++.+++...+.++.++.+|++|+++++++++++.
T Consensus 7 ~~~~~l~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 86 (266)
T 1xq1_A 7 SQRWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVS 86 (266)
T ss_dssp CCTTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHH
Confidence 34566899999999999999999999999999999999999988888888887777789999999999999999999999
Q ss_pred HHh-CCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC
Q 025672 85 NHF-GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT 163 (249)
Q Consensus 85 ~~~-~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~ 163 (249)
+.+ +++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|.+++. ++||++||..+..+.
T Consensus 87 ~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~--------~~iv~isS~~~~~~~ 158 (266)
T 1xq1_A 87 SMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGC--------GNIIFMSSIAGVVSA 158 (266)
T ss_dssp HHHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSS--------CEEEEEC--------
T ss_pred HHhCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC--------cEEEEEccchhccCC
Confidence 999 89999999999877777888899999999999999999999999999987653 889999999998888
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHh
Q 025672 164 WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYL 243 (249)
Q Consensus 164 ~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l 243 (249)
++...|+++|++++.|+++++.|++ ++||++++|+||+++|++..... .+.+.+.+....|.+++.+|+|+|+++.||
T Consensus 159 ~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~l 236 (266)
T 1xq1_A 159 SVGSIYSATKGALNQLARNLACEWA-SDGIRANAVAPAVIATPLAEAVY-DDEFKKVVISRKPLGRFGEPEEVSSLVAFL 236 (266)
T ss_dssp --CCHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEECCSCC--------------------------CCGGGGHHHHHHH
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHh-HhCcEEEEEeeCCCccchhhhhc-CHHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence 8889999999999999999999998 88999999999999987654322 223334444557888999999999999999
Q ss_pred ccCCC
Q 025672 244 ASDAG 248 (249)
Q Consensus 244 ~s~~a 248 (249)
+++++
T Consensus 237 ~~~~~ 241 (266)
T 1xq1_A 237 CMPAA 241 (266)
T ss_dssp TSGGG
T ss_pred cCccc
Confidence 98754
|
| >1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-44 Score=292.76 Aligned_cols=222 Identities=25% Similarity=0.339 Sum_probs=186.5
Q ss_pred CCCCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHH
Q 025672 5 FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTI 84 (249)
Q Consensus 5 ~~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 84 (249)
...+.+++|++|||||++|||++++++|+++|++|++++|+.+.+++ +..+++|++|+++++++++++.
T Consensus 8 ~~~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~-----------~~~~~~D~~~~~~~~~~~~~~~ 76 (247)
T 1uzm_A 8 GAKPPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKG-----------LFGVEVDVTDSDAVDRAFTAVE 76 (247)
T ss_dssp -CCCCCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTT-----------SEEEECCTTCHHHHHHHHHHHH
T ss_pred cccccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHH-----------hcCeeccCCCHHHHHHHHHHHH
Confidence 44556889999999999999999999999999999999998765332 2248899999999999999999
Q ss_pred HHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCc
Q 025672 85 NHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW 164 (249)
Q Consensus 85 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~ 164 (249)
+.++++|++|||||.....++.+.+.++|++.+++|+.++++++++++|.|.+++. |+||++||..+..+.+
T Consensus 77 ~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~--------g~iv~isS~~~~~~~~ 148 (247)
T 1uzm_A 77 EHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKF--------GRMIFIGSVSGLWGIG 148 (247)
T ss_dssp HHHSSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTC--------EEEEEECCCCC-----
T ss_pred HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCC--------CEEEEECCHhhccCCC
Confidence 99999999999999887778888999999999999999999999999999987643 8999999999998888
Q ss_pred cchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhc
Q 025672 165 YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLA 244 (249)
Q Consensus 165 ~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~ 244 (249)
+...|++||+++++|+++++.|++ ++||+||+|+||+++|++... .. +...+.+....|.+|+.+|+|+|++++||+
T Consensus 149 ~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~PG~v~t~~~~~-~~-~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~ 225 (247)
T 1uzm_A 149 NQANYAASKAGVIGMARSIARELS-KANVTANVVAPGYIDTDMTRA-LD-ERIQQGALQFIPAKRVGTPAEVAGVVSFLA 225 (247)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCCHHHHH-SC-HHHHHHHGGGCTTCSCBCHHHHHHHHHHHH
T ss_pred CChhHHHHHHHHHHHHHHHHHHhh-hcCcEEEEEEeCCCcccchhh-cC-HHHHHHHHhcCCCCCCcCHHHHHHHHHHHc
Confidence 899999999999999999999998 889999999999999875432 22 233344556678899999999999999999
Q ss_pred cCCC
Q 025672 245 SDAG 248 (249)
Q Consensus 245 s~~a 248 (249)
++++
T Consensus 226 s~~~ 229 (247)
T 1uzm_A 226 SEDA 229 (247)
T ss_dssp SGGG
T ss_pred Cccc
Confidence 9764
|
| >3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-44 Score=297.70 Aligned_cols=230 Identities=22% Similarity=0.247 Sum_probs=197.5
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhC
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 88 (249)
.+++|++|||||++|||++++++|+++|++|++++|+.+.++++.+++...+.++.++.+|++|+++++++++++.+.++
T Consensus 28 ~l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 107 (301)
T 3tjr_A 28 GFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLLG 107 (301)
T ss_dssp CSTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhCC
Confidence 37899999999999999999999999999999999999999999999988888999999999999999999999999999
Q ss_pred CccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchh
Q 025672 89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH 168 (249)
Q Consensus 89 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~ 168 (249)
++|+||||||+....++.+.+.++|++.+++|+.|+++++++++|.|.+++. +|+||++||..+..+.++...
T Consensus 108 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~-------~g~iv~isS~~~~~~~~~~~~ 180 (301)
T 3tjr_A 108 GVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGT-------GGHIAFTASFAGLVPNAGLGT 180 (301)
T ss_dssp SCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCS-------CEEEEEECCGGGTSCCTTBHH
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCC-------CcEEEEeCchhhcCCCCCchH
Confidence 9999999999988888889999999999999999999999999999987642 389999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCCh--------HHHHHhhhhhhcccCCCCHHHHHHHH
Q 025672 169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP--------EEIRSKATDYMAAYKFGEKWDIAMAA 240 (249)
Q Consensus 169 y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~dva~~v 240 (249)
|++||+|+++|+++++.|++ ++||+|++|+||+|+|++....... ......+.......++.+|+|+|+++
T Consensus 181 Y~asKaa~~~~~~~la~e~~-~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~i 259 (301)
T 3tjr_A 181 YGVAKYGVVGLAETLAREVK-PNGIGVSVLCPMVVETKLVSNSERIRGADYGMSATPEGAFGPLPTQDESVSADDVARLT 259 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHHG-GGTEEEEEECCSCCCSSHHHHHHHHC----------------------CCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhc-ccCcEEEEEECCccccccccccccccchhhccccChhhhccccccccCCCCHHHHHHHH
Confidence 99999999999999999998 8899999999999998754321100 00011111122234567999999999
Q ss_pred HHhccC
Q 025672 241 LYLASD 246 (249)
Q Consensus 241 ~~l~s~ 246 (249)
+.++..
T Consensus 260 ~~~l~~ 265 (301)
T 3tjr_A 260 ADAILA 265 (301)
T ss_dssp HHHHHH
T ss_pred HHHHhc
Confidence 988754
|
| >1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-44 Score=291.10 Aligned_cols=232 Identities=30% Similarity=0.485 Sum_probs=204.2
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeC-CcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGR-RKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r-~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
++++|++|||||++|||++++++|+++|++|++++| +.+.++++.+++...+.++.++.+|++|+++++++++++.+.+
T Consensus 4 ~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 83 (261)
T 1gee_A 4 DLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEF 83 (261)
T ss_dssp GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence 478999999999999999999999999999999999 7777888888887767789999999999999999999999999
Q ss_pred CCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch
Q 025672 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 167 (249)
Q Consensus 88 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~ 167 (249)
+++|+||||||.....++.+.+.++|++.+++|+.+++++++++++.|.+++. .++||++||..+..+.++..
T Consensus 84 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~-------~~~iv~isS~~~~~~~~~~~ 156 (261)
T 1gee_A 84 GKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDI-------KGTVINMSSVHEKIPWPLFV 156 (261)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTC-------CCEEEEECCGGGTSCCTTCH
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCC-------CCEEEEeCCHHhcCCCCCcc
Confidence 99999999999877677778899999999999999999999999999987541 28899999999998888999
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhccCC
Q 025672 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247 (249)
Q Consensus 168 ~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~ 247 (249)
.|+++|++++.++++++.|++ ++||++++|+||+++|++.......++..+.+....|.+++.+|+|+|++++||+++.
T Consensus 157 ~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~ 235 (261)
T 1gee_A 157 HYAASKGGMKLMTETLALEYA-PKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPEEIAAVAAWLASSE 235 (261)
T ss_dssp HHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECSBCSGGGHHHHHSHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGG
T ss_pred HHHHHHHHHHHHHHHHHHHhc-ccCeEEEEEeeCCcCCchhhhcccChhHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcc
Confidence 999999999999999999998 8899999999999998764322111233344455668889999999999999999875
Q ss_pred C
Q 025672 248 G 248 (249)
Q Consensus 248 a 248 (249)
+
T Consensus 236 ~ 236 (261)
T 1gee_A 236 A 236 (261)
T ss_dssp G
T ss_pred c
Confidence 3
|
| >2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-44 Score=292.87 Aligned_cols=230 Identities=23% Similarity=0.277 Sum_probs=190.5
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHH-h
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH-F 87 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~ 87 (249)
++++|++|||||++|||++++++|+++|++|++++|+.+.++++.+++...+.++.++++|++|+++++++++++.+. +
T Consensus 2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~ 81 (260)
T 2qq5_A 2 PMNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQ 81 (260)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHHT
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhcC
Confidence 367999999999999999999999999999999999999888888888766778999999999999999999999886 8
Q ss_pred CCccEEEEcCCC--C-----CCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccc
Q 025672 88 GKLDILVNAAAG--N-----FLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY 160 (249)
Q Consensus 88 ~~id~vi~~ag~--~-----~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~ 160 (249)
+++|+||||||. . ...++.+.+.++|+..+++|+.++++++++++|.|.+++. |+||++||..+.
T Consensus 82 g~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~--------g~iv~isS~~~~ 153 (260)
T 2qq5_A 82 GRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQ--------GLIVVISSPGSL 153 (260)
T ss_dssp TCCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGTC--------CEEEEECCGGGT
T ss_pred CCceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcCC--------cEEEEEcChhhc
Confidence 999999999953 2 2457778889999999999999999999999999987643 899999999887
Q ss_pred ccCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHH-Hh-hh-hhhcccCCCCHHHHH
Q 025672 161 TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIR-SK-AT-DYMAAYKFGEKWDIA 237 (249)
Q Consensus 161 ~~~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~-~~-~~-~~~~~~~~~~~~dva 237 (249)
.+. +...|++||+++++|+++++.|++ ++||+||+|+||+++|++.......+... .. .. ...+++|..+|||+|
T Consensus 154 ~~~-~~~~Y~asK~a~~~~~~~la~e~~-~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~va 231 (260)
T 2qq5_A 154 QYM-FNVPYGVGKAACDKLAADCAHELR-RHGVSCVSLWPGIVQTELLKEHMAKEEVLQDPVLKQFKSAFSSAETTELSG 231 (260)
T ss_dssp SCC-SSHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEECCCSCTTTC----------------------CHHHHHHHHH
T ss_pred CCC-CCCchHHHHHHHHHHHHHHHHHhc-cCCeEEEEEecCccccHHHHHhhccccccchhHHHHHHhhhccCCCHHHHH
Confidence 654 467899999999999999999998 88999999999999988654322111110 11 11 123566778999999
Q ss_pred HHHHHhccCCC
Q 025672 238 MAALYLASDAG 248 (249)
Q Consensus 238 ~~v~~l~s~~a 248 (249)
++++||+|+++
T Consensus 232 ~~v~~l~s~~~ 242 (260)
T 2qq5_A 232 KCVVALATDPN 242 (260)
T ss_dssp HHHHHHHTCTT
T ss_pred HHHHHHhcCcc
Confidence 99999999874
|
| >2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-43 Score=287.02 Aligned_cols=219 Identities=30% Similarity=0.407 Sum_probs=192.4
Q ss_pred CcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCcc
Q 025672 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD 91 (249)
Q Consensus 12 ~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 91 (249)
+|++|||||++|||++++++|+++|++|++++|+.++ ..+++ + +.++.+|++| ++++++++++.+.++++|
T Consensus 2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~---~~~~~---~--~~~~~~D~~~-~~~~~~~~~~~~~~g~id 72 (239)
T 2ekp_A 2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEE---AAQSL---G--AVPLPTDLEK-DDPKGLVKRALEALGGLH 72 (239)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHH---HHHHH---T--CEEEECCTTT-SCHHHHHHHHHHHHTSCC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH---HHHhh---C--cEEEecCCch-HHHHHHHHHHHHHcCCCC
Confidence 6899999999999999999999999999999998765 33333 2 7789999999 999999999999999999
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC--ccchhh
Q 025672 92 ILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT--WYQIHV 169 (249)
Q Consensus 92 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~--~~~~~y 169 (249)
++|||||.....++.+.+.++|++.+++|+.++++++++++|.|.+++. |+||++||..+..+. ++...|
T Consensus 73 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~--------g~iv~isS~~~~~~~~~~~~~~Y 144 (239)
T 2ekp_A 73 VLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGW--------GRVLFIGSVTTFTAGGPVPIPAY 144 (239)
T ss_dssp EEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--------EEEEEECCGGGTSCCTTSCCHHH
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCC--------cEEEEECchhhccCCCCCCCccH
Confidence 9999999887778888999999999999999999999999999987653 899999999988877 788999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhccCCC
Q 025672 170 SAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAG 248 (249)
Q Consensus 170 ~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~a 248 (249)
++||+++++|+++++.|++ ++||+||+|+||+++|++.......++..+.+....|.+|+.+|+|+|++++||+++++
T Consensus 145 ~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~ 222 (239)
T 2ekp_A 145 TTAKTALLGLTRALAKEWA-RLGIRVNLLCPGYVETEFTLPLRQNPELYEPITARIPMGRWARPEEIARVAAVLCGDEA 222 (239)
T ss_dssp HHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCSGGGHHHHTCHHHHHHHHTTCTTSSCBCHHHHHHHHHHHTSGGG
T ss_pred HHHHHHHHHHHHHHHHHhh-hcCcEEEEEEeCCccCchhhccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchh
Confidence 9999999999999999998 88999999999999987643221123344445566788999999999999999999864
|
| >3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-43 Score=285.56 Aligned_cols=217 Identities=24% Similarity=0.326 Sum_probs=192.8
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHH-hcCCCeeEEEccCCCHHHHHHHHHHHHHHhCC
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALH-SLGIPAIGLEGDVRKREDAVRVVESTINHFGK 89 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 89 (249)
++|++|||||++|||++++++|+++|++|++++|+.++++++.+++. ..+.++.++++|++|+++++++++++.+.+++
T Consensus 1 ~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 80 (235)
T 3l77_A 1 EMKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFGD 80 (235)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHSS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcCC
Confidence 47999999999999999999999999999999999999999888886 55778999999999999999999999999999
Q ss_pred ccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhh
Q 025672 90 LDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHV 169 (249)
Q Consensus 90 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y 169 (249)
+|++|||||.....++.+.+.++|++.+++|+.++++++++++|.|.+. ++++|+++|..+..+.++...|
T Consensus 81 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~---------~~~ii~~sS~~~~~~~~~~~~Y 151 (235)
T 3l77_A 81 VDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRT---------GGLALVTTSDVSARLIPYGGGY 151 (235)
T ss_dssp CSEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH---------TCEEEEECCGGGSSCCTTCHHH
T ss_pred CCEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc---------CCcEEEEecchhcccCCCcchH
Confidence 9999999999888889999999999999999999999999999999554 3889999999999998999999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhccCCCC
Q 025672 170 SAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGQ 249 (249)
Q Consensus 170 ~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~a~ 249 (249)
+++|+++++|+++++.+ ..||+||+|+||+++|++....... .+..++.+|+|+|+++.||+++.++
T Consensus 152 ~~sKaa~~~~~~~l~~~---~~~i~v~~v~PG~v~T~~~~~~~~~----------~~~~~~~~p~dva~~v~~l~~~~~~ 218 (235)
T 3l77_A 152 VSTKWAARALVRTFQIE---NPDVRFFELRPGAVDTYFGGSKPGK----------PKEKGYLKPDEIAEAVRCLLKLPKD 218 (235)
T ss_dssp HHHHHHHHHHHHHHHHH---CTTSEEEEEEECSBSSSTTTCCSCC----------CGGGTCBCHHHHHHHHHHHHTSCTT
T ss_pred HHHHHHHHHHHHHHhhc---CCCeEEEEEeCCccccccccccCCc----------ccccCCCCHHHHHHHHHHHHcCCCC
Confidence 99999999999999544 6699999999999998765433221 1123788999999999999998753
|
| >1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-44 Score=294.42 Aligned_cols=230 Identities=20% Similarity=0.185 Sum_probs=198.9
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHH---cCCeEEEEeCCcchHHHHHHHHHhc--CCCeeEEEccCCCHHHHHHHHHH
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGK---HGAAIAIMGRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVES 82 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~---~G~~v~l~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~ 82 (249)
..+++|++|||||++|||++++++|++ +|++|++++|+.+.++++.+++... +.++.++++|++|++++++++++
T Consensus 2 ~~l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~ 81 (259)
T 1oaa_A 2 DGLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSA 81 (259)
T ss_dssp CCCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHH
T ss_pred CCCCCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHH
Confidence 457899999999999999999999999 8999999999999898888888654 56789999999999999999999
Q ss_pred HHH--HhCCcc--EEEEcCCCCCC--CCCCC-CCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEec
Q 025672 83 TIN--HFGKLD--ILVNAAAGNFL--VPAED-LSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINIS 155 (249)
Q Consensus 83 ~~~--~~~~id--~vi~~ag~~~~--~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~is 155 (249)
+.+ .++++| +||||||.... .++.+ .+.++|++.+++|+.++++++++++|.|.++.. .+|+||++|
T Consensus 82 ~~~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~------~~g~iv~is 155 (259)
T 1oaa_A 82 VRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPG------LSKTVVNIS 155 (259)
T ss_dssp HHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTT------CEEEEEEEC
T ss_pred HHhccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC------CCceEEEEc
Confidence 988 678899 99999998643 45666 688999999999999999999999999976410 038999999
Q ss_pred cccccccCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCC---ChHHHHHhhhhhhcccCCCC
Q 025672 156 ATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL---APEEIRSKATDYMAAYKFGE 232 (249)
Q Consensus 156 s~~~~~~~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 232 (249)
|..+..+.++...|++||+|+++|+++++.|++ + |+||+|+||+++|++..... ..++..+.+....|.+|+.+
T Consensus 156 S~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~-~--i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 232 (259)
T 1oaa_A 156 SLCALQPYKGWGLYCAGKAARDMLYQVLAAEEP-S--VRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSDGALVD 232 (259)
T ss_dssp CGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHCT-T--EEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHHHHHHTTCSBC
T ss_pred CchhcCCCCCccHHHHHHHHHHHHHHHHHhhCC-C--ceEEEecCCCcCcchHHHHhhccCChhHHHHHHHhhhcCCcCC
Confidence 999999999999999999999999999999996 4 99999999999987543211 12334455666778899999
Q ss_pred HHHHHHHHHHhccC
Q 025672 233 KWDIAMAALYLASD 246 (249)
Q Consensus 233 ~~dva~~v~~l~s~ 246 (249)
|+|+|++++||+++
T Consensus 233 p~dvA~~v~~l~~~ 246 (259)
T 1oaa_A 233 CGTSAQKLLGLLQK 246 (259)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhh
Confidence 99999999999985
|
| >2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-43 Score=287.40 Aligned_cols=228 Identities=24% Similarity=0.389 Sum_probs=202.0
Q ss_pred CcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHH-HhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCc
Q 025672 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAAL-HSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (249)
Q Consensus 12 ~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~-~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 90 (249)
+|++|||||++|||++++++|+++|++|++++|+.++++++.+++ ...+.++.++++|++|+++++++++++.+.++++
T Consensus 2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 81 (250)
T 2cfc_A 2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGAI 81 (250)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence 689999999999999999999999999999999998888888777 4445679999999999999999999999999999
Q ss_pred cEEEEcCCCCCCCC---CCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch
Q 025672 91 DILVNAAAGNFLVP---AEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 167 (249)
Q Consensus 91 d~vi~~ag~~~~~~---~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~ 167 (249)
|+||||||.....+ +.+.+.++|++.+++|+.+++++++.++|.|.+++. ++||++||..+..+.++..
T Consensus 82 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~--------~~iv~isS~~~~~~~~~~~ 153 (250)
T 2cfc_A 82 DVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGA--------GVIVNIASVASLVAFPGRS 153 (250)
T ss_dssp CEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--------EEEEEECCGGGTSCCTTCH
T ss_pred CEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCC--------CEEEEECChhhccCCCCch
Confidence 99999999876555 677889999999999999999999999999987653 8999999999998888899
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhccCC
Q 025672 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247 (249)
Q Consensus 168 ~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~ 247 (249)
.|+++|++++.|+++++.|++ ++||++++|+||+++|++.......+.+.+.+....|.+++.+|+|+|++++||++++
T Consensus 154 ~Y~~sK~a~~~~~~~l~~e~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~ 232 (250)
T 2cfc_A 154 AYTTSKGAVLQLTKSVAVDYA-GSGIRCNAVCPGMIETPMTQWRLDQPELRDQVLARIPQKEIGTAAQVADAVMFLAGED 232 (250)
T ss_dssp HHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCSTTTHHHHTSHHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSTT
T ss_pred hHHHHHHHHHHHHHHHHHHhc-ccCeEEEEEEeCcCccCccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCch
Confidence 999999999999999999998 8899999999999998765431222344445556678899999999999999999876
Q ss_pred C
Q 025672 248 G 248 (249)
Q Consensus 248 a 248 (249)
+
T Consensus 233 ~ 233 (250)
T 2cfc_A 233 A 233 (250)
T ss_dssp C
T ss_pred h
Confidence 4
|
| >3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-44 Score=292.48 Aligned_cols=214 Identities=27% Similarity=0.383 Sum_probs=190.3
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
+.+++|++|||||++|||++++++|+++|++|++++|+.+..+ ..++.++++|++|+++++++++++.+.+
T Consensus 24 ~~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~---------~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 94 (260)
T 3un1_A 24 MRNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSA---------DPDIHTVAGDISKPETADRIVREGIERF 94 (260)
T ss_dssp HHTTCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCS---------STTEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred hCcCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhcc---------cCceEEEEccCCCHHHHHHHHHHHHHHC
Confidence 3478999999999999999999999999999999999876432 2368999999999999999999999999
Q ss_pred CCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc--Ccc
Q 025672 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA--TWY 165 (249)
Q Consensus 88 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~--~~~ 165 (249)
+++|+||||||+....++.+.+.++|++.+++|+.|+++++++++|.|.+++. |+||++||..+..+ .++
T Consensus 95 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~--------g~iv~isS~~~~~~~~~~~ 166 (260)
T 3un1_A 95 GRIDSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQGS--------GHIVSITTSLVDQPMVGMP 166 (260)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTC--------EEEEEECCTTTTSCBTTCC
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCC--------cEEEEEechhhccCCCCCc
Confidence 99999999999988888889999999999999999999999999999988754 89999999877643 445
Q ss_pred chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhc
Q 025672 166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLA 244 (249)
Q Consensus 166 ~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~ 244 (249)
...|++||+|+++|+++++.|++ ++||+||+|+||+|+|++... +..+.+....|.+|+++|+|+|++++||.
T Consensus 167 ~~~Y~~sKaa~~~l~~~la~e~~-~~gI~vn~v~PG~v~t~~~~~-----~~~~~~~~~~p~~r~~~~~dva~av~~L~ 239 (260)
T 3un1_A 167 SALASLTKGGLNAVTRSLAMEFS-RSGVRVNAVSPGVIKTPMHPA-----ETHSTLAGLHPVGRMGEIRDVVDAVLYLE 239 (260)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTT-TTTEEEEEEEECCBCCTTSCG-----GGHHHHHTTSTTSSCBCHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHhC-cCCeEEEEEeecCCCCCCCCH-----HHHHHHhccCCCCCCcCHHHHHHHHHHhc
Confidence 68899999999999999999998 899999999999999876432 23345566789999999999999999993
|
| >3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-44 Score=289.67 Aligned_cols=227 Identities=31% Similarity=0.345 Sum_probs=185.1
Q ss_pred CCCCCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHH
Q 025672 4 PFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVEST 83 (249)
Q Consensus 4 ~~~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 83 (249)
|.....+++|++|||||++|||++++++|+++|++|++++|+.++++++.+++. .++.++.+|+++.++++++++++
T Consensus 6 ~~~~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~ 82 (249)
T 3f9i_A 6 HHHMIDLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALK---DNYTIEVCNLANKEECSNLISKT 82 (249)
T ss_dssp ---CCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC---SSEEEEECCTTSHHHHHHHHHTC
T ss_pred ccccccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhc---cCccEEEcCCCCHHHHHHHHHhc
Confidence 456677899999999999999999999999999999999999998888877774 47889999999999998887643
Q ss_pred HHHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC
Q 025672 84 INHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT 163 (249)
Q Consensus 84 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~ 163 (249)
+++|++|||||.....++.+.+.++|++.+++|+.++++++++++|.|.++.. |+||++||..+..+.
T Consensus 83 ----~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~--------g~iv~isS~~~~~~~ 150 (249)
T 3f9i_A 83 ----SNLDILVCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRY--------GRIINISSIVGIAGN 150 (249)
T ss_dssp ----SCCSEEEECCC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTC--------EEEEEECCCCC--CC
T ss_pred ----CCCCEEEECCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC--------cEEEEEccHHhccCC
Confidence 78999999999887777778889999999999999999999999999987653 899999999999999
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHh
Q 025672 164 WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYL 243 (249)
Q Consensus 164 ~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l 243 (249)
++...|++||+|+++|+++++.|++ ++||+||+|+||+++|++... . .+...+.+....|.+++.+|+|+|+++.||
T Consensus 151 ~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~PG~v~t~~~~~-~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~l 227 (249)
T 3f9i_A 151 PGQANYCASKAGLIGMTKSLSYEVA-TRGITVNAVAPGFIKSDMTDK-L-NEKQREAIVQKIPLGTYGIPEDVAYAVAFL 227 (249)
T ss_dssp SCSHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECCBC-------C-CHHHHHHHHHHCTTCSCBCHHHHHHHHHHH
T ss_pred CCCchhHHHHHHHHHHHHHHHHHHH-HcCcEEEEEecCccccCcccc-c-CHHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence 9999999999999999999999998 889999999999999875433 2 344556667778999999999999999999
Q ss_pred ccCCC
Q 025672 244 ASDAG 248 (249)
Q Consensus 244 ~s~~a 248 (249)
+++++
T Consensus 228 ~s~~~ 232 (249)
T 3f9i_A 228 ASNNA 232 (249)
T ss_dssp HSGGG
T ss_pred cCCcc
Confidence 99764
|
| >2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-44 Score=294.47 Aligned_cols=226 Identities=25% Similarity=0.255 Sum_probs=192.8
Q ss_pred CCCCcEEEEecC--CCchhHHHHHHHHHcCCeEEEEeCCcch-HHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHH
Q 025672 9 ILKGKVALLTGG--GSGIGFEISLQLGKHGAAIAIMGRRKTV-LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN 85 (249)
Q Consensus 9 ~l~~k~~lItGa--~~giG~~~a~~l~~~G~~v~l~~r~~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 85 (249)
.+++|++||||| ++|||++++++|+++|++|++++|+.++ ++++.++ .+.++.++.+|++|+++++++++++.+
T Consensus 4 ~l~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 80 (269)
T 2h7i_A 4 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDR---LPAKAPLLELDVQNEEHLASLAGRVTE 80 (269)
T ss_dssp TTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTT---SSSCCCEEECCTTCHHHHHHHHHHHHH
T ss_pred ccCCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHh---cCCCceEEEccCCCHHHHHHHHHHHHH
Confidence 478999999999 9999999999999999999999998765 3444433 245788999999999999999999999
Q ss_pred HhC---CccEEEEcCCCCC-----CCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccc
Q 025672 86 HFG---KLDILVNAAAGNF-----LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISAT 157 (249)
Q Consensus 86 ~~~---~id~vi~~ag~~~-----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~ 157 (249)
.+| ++|+||||||... ..++.+.+.++|++.+++|+.++++++++++|.|.+. |+||++||.
T Consensus 81 ~~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~----------g~iv~iss~ 150 (269)
T 2h7i_A 81 AIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPG----------GSIVGMDFD 150 (269)
T ss_dssp HHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEE----------EEEEEEECC
T ss_pred HhCCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccC----------CeEEEEcCc
Confidence 999 9999999999875 4677888999999999999999999999999998653 789999997
Q ss_pred cccccCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCC----CChH------HHHHhhhhhhcc
Q 025672 158 LHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK----LAPE------EIRSKATDYMAA 227 (249)
Q Consensus 158 ~~~~~~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~----~~~~------~~~~~~~~~~~~ 227 (249)
.. .+.+.+..|++||+++.+|+++++.|++ ++||+||+|+||+++|++.... ..++ ...+.+....|+
T Consensus 151 ~~-~~~~~~~~Y~asKaa~~~l~~~la~e~~-~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 228 (269)
T 2h7i_A 151 PS-RAMPAYNWMTVAKSALESVNRFVAREAG-KYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPI 228 (269)
T ss_dssp CS-SCCTTTHHHHHHHHHHHHHHHHHHHHHH-TTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCTT
T ss_pred cc-cccCchHHHHHHHHHHHHHHHHHHHHhc-ccCcEEEEEecCcccchhhhccccccchhhHHHHHHHHHHhhhccCCc
Confidence 76 5677888999999999999999999998 8999999999999998754321 1111 122334556788
Q ss_pred c-CCCCHHHHHHHHHHhccCCCC
Q 025672 228 Y-KFGEKWDIAMAALYLASDAGQ 249 (249)
Q Consensus 228 ~-~~~~~~dva~~v~~l~s~~a~ 249 (249)
+ |+++|||+|++++||+|++++
T Consensus 229 ~rr~~~p~dvA~~v~~L~s~~~~ 251 (269)
T 2h7i_A 229 GWNMKDATPVAKTVCALLSDWLP 251 (269)
T ss_dssp CCCTTCCHHHHHHHHHHHSSSCT
T ss_pred ccCCCCHHHHHHHHHHHhCchhc
Confidence 8 699999999999999998763
|
| >2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-43 Score=290.43 Aligned_cols=231 Identities=30% Similarity=0.363 Sum_probs=204.8
Q ss_pred CCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHH
Q 025672 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (249)
Q Consensus 7 ~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 86 (249)
.+.+++|++|||||++|||++++++|+++|++|++++|+.+.++++.+++...+.++.++.+|++|+++++++++++.+.
T Consensus 39 ~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~ 118 (285)
T 2c07_A 39 YYCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTE 118 (285)
T ss_dssp CCCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cccCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHh
Confidence 34578999999999999999999999999999999999988888888888777778999999999999999999999999
Q ss_pred hCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccc
Q 025672 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ 166 (249)
Q Consensus 87 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~ 166 (249)
++++|+||||||.....++.+.+.++|+..+++|+.++++++++++|.|.+++. ++||++||..+..+.++.
T Consensus 119 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~--------~~iv~isS~~~~~~~~~~ 190 (285)
T 2c07_A 119 HKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRY--------GRIINISSIVGLTGNVGQ 190 (285)
T ss_dssp CSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTC--------EEEEEECCTHHHHCCTTC
T ss_pred cCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCC--------CEEEEECChhhccCCCCC
Confidence 999999999999887778888999999999999999999999999999987643 899999999998888889
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhccC
Q 025672 167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246 (249)
Q Consensus 167 ~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~ 246 (249)
..|+++|++++.|+++++.|++ +.||++++|+||+++|++... . .+...+.+....|.+++.+|+|+|++++||+++
T Consensus 191 ~~Y~asK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~-~-~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~~~ 267 (285)
T 2c07_A 191 ANYSSSKAGVIGFTKSLAKELA-SRNITVNAIAPGFISSDMTDK-I-SEQIKKNIISNIPAGRMGTPEEVANLACFLSSD 267 (285)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCC------C-CHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSG
T ss_pred chHHHHHHHHHHHHHHHHHHHH-HhCcEEEEEEeCcEecCchhh-c-CHHHHHHHHhhCCCCCCCCHHHHHHHHHHHhCC
Confidence 9999999999999999999998 889999999999999875432 2 234444555667888999999999999999987
Q ss_pred CC
Q 025672 247 AG 248 (249)
Q Consensus 247 ~a 248 (249)
++
T Consensus 268 ~~ 269 (285)
T 2c07_A 268 KS 269 (285)
T ss_dssp GG
T ss_pred Cc
Confidence 54
|
| >2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-43 Score=292.33 Aligned_cols=228 Identities=19% Similarity=0.259 Sum_probs=188.7
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
.+|+ |++|||||++|||++++++|+++|++|++++|+.++++++.+++... .++.++.+|++|+++++++++++.+.+
T Consensus 18 ~~~~-k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 95 (272)
T 2nwq_A 18 SHMS-STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAK-TRVLPLTLDVRDRAAMSAAVDNLPEEF 95 (272)
T ss_dssp ---C-CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTT-SCEEEEECCTTCHHHHHHHHHTCCGGG
T ss_pred CCcC-cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcC-CcEEEEEcCCCCHHHHHHHHHHHHHHh
Confidence 4466 99999999999999999999999999999999998888888887543 578999999999999999999999999
Q ss_pred CCccEEEEcCCCCCC-CCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCc-eEEEeccccccccCcc
Q 025672 88 GKLDILVNAAAGNFL-VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGG-IIINISATLHYTATWY 165 (249)
Q Consensus 88 ~~id~vi~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g-~iv~iss~~~~~~~~~ 165 (249)
+++|+||||||.... .++.+.+.++|++.+++|+.++++++++++|.|.+++. | +||++||..+..+.++
T Consensus 96 g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~--------g~~IV~isS~~~~~~~~~ 167 (272)
T 2nwq_A 96 ATLRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGA--------GASIVNLGSVAGKWPYPG 167 (272)
T ss_dssp SSCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCT--------TCEEEEECCGGGTSCCTT
T ss_pred CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--------CcEEEEeCCchhccCCCC
Confidence 999999999998763 77888999999999999999999999999999987653 6 9999999999999888
Q ss_pred chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhcc
Q 025672 166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245 (249)
Q Consensus 166 ~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s 245 (249)
...|+++|+++++|+++++.|++ ++||+||+|+||+++|++.......+. +..........+.+|+|+|++++||++
T Consensus 168 ~~~Y~asKaa~~~l~~~la~el~-~~gIrvn~v~PG~v~T~~~~~~~~~~~--~~~~~~~~~~~~~~pedvA~~v~~l~s 244 (272)
T 2nwq_A 168 SHVYGGTKAFVEQFSLNLRCDLQ-GTGVRVTNLEPGLCESEFSLVRFGGDQ--ARYDKTYAGAHPIQPEDIAETIFWIMN 244 (272)
T ss_dssp CHHHHHHHHHHHHHHHHHHTTCT-TSCCEEEEEEECSBC----------------------CCCCBCHHHHHHHHHHHHT
T ss_pred CchHHHHHHHHHHHHHHHHHHhC-ccCeEEEEEEcCCCcCcchhcccccch--HHHHHhhccCCCCCHHHHHHHHHHHhC
Confidence 99999999999999999999998 899999999999999876432211110 001111112235799999999999999
Q ss_pred CCC
Q 025672 246 DAG 248 (249)
Q Consensus 246 ~~a 248 (249)
+.+
T Consensus 245 ~~~ 247 (272)
T 2nwq_A 245 QPA 247 (272)
T ss_dssp SCT
T ss_pred CCc
Confidence 764
|
| >3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-43 Score=291.09 Aligned_cols=233 Identities=22% Similarity=0.279 Sum_probs=200.4
Q ss_pred CCCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHH
Q 025672 6 KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN 85 (249)
Q Consensus 6 ~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 85 (249)
..+++++|++|||||++|||++++++|+++|++|++++|+.++++++.+++ +.++.++++|++|+++++++++++ +
T Consensus 24 ~~~~l~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~-~ 99 (281)
T 3ppi_A 24 TIKQFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADEL---GNRAEFVSTNVTSEDSVLAAIEAA-N 99 (281)
T ss_dssp CCGGGTTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHH-T
T ss_pred hhhccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh---CCceEEEEcCCCCHHHHHHHHHHH-H
Confidence 345689999999999999999999999999999999999999888888777 567999999999999999999999 8
Q ss_pred HhCCccEEEEc-CCCCCCCCC-----CCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccc
Q 025672 86 HFGKLDILVNA-AAGNFLVPA-----EDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH 159 (249)
Q Consensus 86 ~~~~id~vi~~-ag~~~~~~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~ 159 (249)
.++++|++||| +|.....++ .+.+.++|++.+++|+.+++++++++++.|.+..... ...+|+||++||..+
T Consensus 100 ~~~~id~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~--~~~~g~iv~isS~~~ 177 (281)
T 3ppi_A 100 QLGRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRE--NGERGALVLTASIAG 177 (281)
T ss_dssp TSSEEEEEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCT--TSCCEEEEEECCGGG
T ss_pred HhCCCCeEEEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccc--cCCCeEEEEEecccc
Confidence 88999999999 554443333 3678899999999999999999999999997632111 112489999999999
Q ss_pred cccCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcc-cCCCCHHHHHH
Q 025672 160 YTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAA-YKFGEKWDIAM 238 (249)
Q Consensus 160 ~~~~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~ 238 (249)
..+.++...|++||+|+.+|+++++.|++ ++||+||+|+||+|+|++... .. ++....+....|. +|+.+|+|+|+
T Consensus 178 ~~~~~~~~~Y~asKaa~~~~~~~la~e~~-~~gi~v~~v~PG~v~T~~~~~-~~-~~~~~~~~~~~~~~~~~~~pedvA~ 254 (281)
T 3ppi_A 178 YEGQIGQTAYAAAKAGVIGLTIAAARDLS-SAGIRVNTIAPGTMKTPIMES-VG-EEALAKFAANIPFPKRLGTPDEFAD 254 (281)
T ss_dssp TSCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCCHHHHT-TC-HHHHHHHHHTCCSSSSCBCHHHHHH
T ss_pred cCCCCCCcccHHHHHHHHHHHHHHHHHHh-hcCeEEEEEecCcCCchhhhc-cc-HHHHHHHHhcCCCCCCCCCHHHHHH
Confidence 99999999999999999999999999998 889999999999999875443 32 3455566667777 89999999999
Q ss_pred HHHHhccCC
Q 025672 239 AALYLASDA 247 (249)
Q Consensus 239 ~v~~l~s~~ 247 (249)
+++||+++.
T Consensus 255 ~v~~l~s~~ 263 (281)
T 3ppi_A 255 AAAFLLTNG 263 (281)
T ss_dssp HHHHHHHCS
T ss_pred HHHHHHcCC
Confidence 999999863
|
| >2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=8.6e-44 Score=288.75 Aligned_cols=222 Identities=25% Similarity=0.301 Sum_probs=190.6
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhC
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 88 (249)
.+++|++|||||++|||++++++|+++|++|++++|+.++++++. ++ .++.++.+|++|++++++ +.+.++
T Consensus 3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-~~----~~~~~~~~D~~~~~~~~~----~~~~~~ 73 (246)
T 2ag5_A 3 RLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELE-KY----PGIQTRVLDVTKKKQIDQ----FANEVE 73 (246)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGG-GS----TTEEEEECCTTCHHHHHH----HHHHCS
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-hc----cCceEEEeeCCCHHHHHH----HHHHhC
Confidence 478999999999999999999999999999999999987665443 22 268899999999999884 445578
Q ss_pred CccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCc-cch
Q 025672 89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW-YQI 167 (249)
Q Consensus 89 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~-~~~ 167 (249)
++|+||||||.....++.+.+.++|+..+++|+.++++++++++|.|.+++. |+||++||..+..+.+ +..
T Consensus 74 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~--------g~iv~isS~~~~~~~~~~~~ 145 (246)
T 2ag5_A 74 RLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKS--------GNIINMSSVASSVKGVVNRC 145 (246)
T ss_dssp CCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--------EEEEEECCSBTTTBCCTTBH
T ss_pred CCCEEEECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--------ceEEEEechHhCcCCCCCCc
Confidence 9999999999887778888899999999999999999999999999987653 8999999998888877 889
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCC----CChHHHHHhhhhhhcccCCCCHHHHHHHHHHh
Q 025672 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK----LAPEEIRSKATDYMAAYKFGEKWDIAMAALYL 243 (249)
Q Consensus 168 ~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l 243 (249)
.|+++|+++++|+++++.|++ ++||+||+|+||+++|++.... ...++..+.+....|.+|+.+|+|+|++++||
T Consensus 146 ~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~v~~l 224 (246)
T 2ag5_A 146 VYSTTKAAVIGLTKSVAADFI-QQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAMLCVYL 224 (246)
T ss_dssp HHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCTTSSCEEHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHhh-hcCcEEEEEeeCcCcCcchhhhhhcccCcHHHHHHHHhcCCCCCCCCHHHHHHHHHHH
Confidence 999999999999999999998 8899999999999998754321 11233444455667889999999999999999
Q ss_pred ccCCC
Q 025672 244 ASDAG 248 (249)
Q Consensus 244 ~s~~a 248 (249)
+++++
T Consensus 225 ~s~~~ 229 (246)
T 2ag5_A 225 ASDES 229 (246)
T ss_dssp HSGGG
T ss_pred hCccc
Confidence 99865
|
| >3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-43 Score=287.36 Aligned_cols=221 Identities=23% Similarity=0.245 Sum_probs=184.5
Q ss_pred cEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCccE
Q 025672 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI 92 (249)
Q Consensus 13 k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ 92 (249)
|+++||||++|||++++++|+++|++|++++|+.++++++.+++. .++.++.+|++|+++++++++++.+.++++|+
T Consensus 1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~ 77 (248)
T 3asu_A 1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELG---DNLYIAQLDVRNRAAIEEMLASLPAEWCNIDI 77 (248)
T ss_dssp CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC---TTEEEEECCTTCHHHHHHHHHTSCTTTCCCCE
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc---CceEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence 689999999999999999999999999999999988888777763 47899999999999999999999999999999
Q ss_pred EEEcCCCCC-CCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhhHH
Q 025672 93 LVNAAAGNF-LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSA 171 (249)
Q Consensus 93 vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~~ 171 (249)
||||||... ..++.+.+.++|+..+++|+.++++++++++|.|.+++. |+||++||..+..+.++...|++
T Consensus 78 lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~--------g~iv~isS~~~~~~~~~~~~Y~a 149 (248)
T 3asu_A 78 LVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNH--------GHIINIGSTAGSWPYAGGNVYGA 149 (248)
T ss_dssp EEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--------CEEEEECCGGGTSCCTTCHHHHH
T ss_pred EEECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC--------ceEEEEccchhccCCCCCchHHH
Confidence 999999863 567778899999999999999999999999999987643 89999999999999899999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCeEEEEEecCccc-cccccCCCC-hHHHHHhhhhhhcccCCCCHHHHHHHHHHhccCCC
Q 025672 172 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK-DTAGVSKLA-PEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAG 248 (249)
Q Consensus 172 sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~-t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~a 248 (249)
||+++++|+++++.|++ ++||+||+|+||+|+ |++...... .+.... .......+.+|+|+|++++||+++.+
T Consensus 150 sKaa~~~~~~~la~e~~-~~gi~v~~v~PG~v~gT~~~~~~~~~~~~~~~---~~~~~~~~~~p~dvA~~v~~l~s~~~ 224 (248)
T 3asu_A 150 TKAFVRQFSLNLRTDLH-GTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAE---KTYQNTVALTPEDVSEAVWWVSTLPA 224 (248)
T ss_dssp HHHHHHHHHHHHHHHTT-TSCCEEEEEEECSBCC-------------------------CCBCHHHHHHHHHHHHHSCT
T ss_pred HHHHHHHHHHHHHHHhh-hcCcEEEEEeccccccCcchhhcccCchHHHH---HHHhccCCCCHHHHHHHHHHHhcCCc
Confidence 99999999999999998 899999999999999 875432111 111111 11112235699999999999999754
|
| >2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-43 Score=285.93 Aligned_cols=228 Identities=29% Similarity=0.426 Sum_probs=182.7
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEE-eCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIM-GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~-~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
++++|++|||||++|||++++++|+++|++|+++ .|+.+.++++.+++...+.++.++.+|++|+++++++++++.+.+
T Consensus 2 ~l~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 81 (247)
T 2hq1_A 2 QLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAF 81 (247)
T ss_dssp TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence 4789999999999999999999999999999998 677777888888887777789999999999999999999999999
Q ss_pred CCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch
Q 025672 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 167 (249)
Q Consensus 88 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~ 167 (249)
+++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|.+++. ++||++||..+..+.++..
T Consensus 82 ~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~--------~~iv~~sS~~~~~~~~~~~ 153 (247)
T 2hq1_A 82 GRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKS--------GKIINITSIAGIIGNAGQA 153 (247)
T ss_dssp SCCCEEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHHTC--------EEEEEECC---------CH
T ss_pred CCCCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC--------cEEEEEcChhhccCCCCCc
Confidence 99999999999877667777888999999999999999999999999987653 8999999998888888899
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhccCC
Q 025672 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247 (249)
Q Consensus 168 ~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~ 247 (249)
.|+++|++++.++++++.|++ ++||++|+|+||+++|++... . ++...+.+....|.+++.+|+|+|+++.||++++
T Consensus 154 ~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~-~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~ 230 (247)
T 2hq1_A 154 NYAASKAGLIGFTKSIAKEFA-AKGIYCNAVAPGIIKTDMTDV-L-PDKVKEMYLNNIPLKRFGTPEEVANVVGFLASDD 230 (247)
T ss_dssp HHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCCHHHHT-S-CHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGG
T ss_pred HhHHHHHHHHHHHHHHHHHHH-HcCcEEEEEEEEEEeccchhh-c-chHHHHHHHhhCCCCCCCCHHHHHHHHHHHcCcc
Confidence 999999999999999999998 889999999999999765432 2 2334444556678889999999999999999875
|
| >2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-43 Score=284.94 Aligned_cols=230 Identities=29% Similarity=0.375 Sum_probs=201.1
Q ss_pred CCCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCe-eEEEccCCCHHHHHHHHHHHH
Q 025672 6 KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPA-IGLEGDVRKREDAVRVVESTI 84 (249)
Q Consensus 6 ~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~-~~~~~Dl~~~~~~~~~~~~~~ 84 (249)
..+++++|++|||||++|||++++++|+++|++|++++|+.++++++.+++ +.++ .++.+|++|+++++++++++.
T Consensus 5 ~~~~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~ 81 (254)
T 2wsb_A 5 TVFRLDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQEL---GAAVAARIVADVTDAEAMTAAAAEAE 81 (254)
T ss_dssp TTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---GGGEEEEEECCTTCHHHHHHHHHHHH
T ss_pred cccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---cccceeEEEEecCCHHHHHHHHHHHH
Confidence 345689999999999999999999999999999999999988888777776 3356 889999999999999999998
Q ss_pred HHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCc
Q 025672 85 NHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW 164 (249)
Q Consensus 85 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~ 164 (249)
+ ++++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|.+++. ++||++||..+..+.+
T Consensus 82 ~-~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~--------~~iv~isS~~~~~~~~ 152 (254)
T 2wsb_A 82 A-VAPVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGA--------GAIVNLGSMSGTIVNR 152 (254)
T ss_dssp H-HSCCCEEEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--------EEEEEECCGGGTSCCS
T ss_pred h-hCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC--------cEEEEEecchhccCCC
Confidence 8 899999999999887778888899999999999999999999999999987653 8999999998887777
Q ss_pred cc--hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHH
Q 025672 165 YQ--IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALY 242 (249)
Q Consensus 165 ~~--~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~ 242 (249)
.. ..|+++|++++.++++++.|++ ++||++++|+||+++|++.......++..+.+....|.+++.+|+|+|++++|
T Consensus 153 ~~~~~~Y~~sK~a~~~~~~~~~~~~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~ 231 (254)
T 2wsb_A 153 PQFASSYMASKGAVHQLTRALAAEWA-GRGVRVNALAPGYVATEMTLKMRERPELFETWLDMTPMGRCGEPSEIAAAALF 231 (254)
T ss_dssp SSCBHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECCBCSHHHHHHHTCHHHHHHHHHTSTTSSCBCHHHHHHHHHH
T ss_pred CCcchHHHHHHHHHHHHHHHHHHHHh-hcCeEEEEEEecccCchhhhccccChHHHHHHHhcCCCCCCCCHHHHHHHHHH
Confidence 77 8999999999999999999998 88999999999999987543222223444455566788899999999999999
Q ss_pred hccCCC
Q 025672 243 LASDAG 248 (249)
Q Consensus 243 l~s~~a 248 (249)
|+++.+
T Consensus 232 l~~~~~ 237 (254)
T 2wsb_A 232 LASPAA 237 (254)
T ss_dssp HHSGGG
T ss_pred HhCccc
Confidence 998753
|
| >1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-43 Score=284.06 Aligned_cols=231 Identities=31% Similarity=0.464 Sum_probs=206.3
Q ss_pred CCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHH
Q 025672 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (249)
Q Consensus 7 ~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 86 (249)
.+++++|++|||||++|||++++++|+++|++|++++|+.+.++.+.+++...+.++.++.+|++|+++++++++++.+.
T Consensus 6 ~~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 85 (255)
T 1fmc_A 6 NLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISK 85 (255)
T ss_dssp GGCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHh
Confidence 45688999999999999999999999999999999999998888888888777778999999999999999999999999
Q ss_pred hCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccc
Q 025672 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ 166 (249)
Q Consensus 87 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~ 166 (249)
++++|+||||||.....++ +.+.++|++.+++|+.++++++++++|.|.++.. ++||++||..+..+.++.
T Consensus 86 ~~~~d~vi~~Ag~~~~~~~-~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~--------~~iv~~sS~~~~~~~~~~ 156 (255)
T 1fmc_A 86 LGKVDILVNNAGGGGPKPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGG--------GVILTITSMAAENKNINM 156 (255)
T ss_dssp HSSCCEEEECCCCCCCCCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--------EEEEEECCGGGTCCCTTC
T ss_pred cCCCCEEEECCCCCCCCCC-CCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC--------cEEEEEcchhhcCCCCCC
Confidence 9999999999998766665 6789999999999999999999999999987643 889999999999888889
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhccC
Q 025672 167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246 (249)
Q Consensus 167 ~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~ 246 (249)
..|+++|++++.+++.++.|++ ++||++++|+||++.|++...... +...+.+....|.+++++|+|+|+++.||+++
T Consensus 157 ~~Y~~sK~a~~~~~~~~~~~~~-~~~i~v~~v~Pg~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~ 234 (255)
T 1fmc_A 157 TSYASSKAAASHLVRNMAFDLG-EKNIRVNGIAPGAILTDALKSVIT-PEIEQKMLQHTPIRRLGQPQDIANAALFLCSP 234 (255)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH-TTTEEEEEEEECSBCSHHHHTTCC-HHHHHHHHHTCSSCSCBCHHHHHHHHHHHHSG
T ss_pred cccHHHHHHHHHHHHHHHHHhh-hcCcEEEEEecccCcchhhhhccC-hHHHHHHHhcCCcccCCCHHHHHHHHHHHhCC
Confidence 9999999999999999999998 889999999999999876544333 34444555667889999999999999999987
Q ss_pred CC
Q 025672 247 AG 248 (249)
Q Consensus 247 ~a 248 (249)
++
T Consensus 235 ~~ 236 (255)
T 1fmc_A 235 AA 236 (255)
T ss_dssp GG
T ss_pred cc
Confidence 53
|
| >3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-43 Score=289.41 Aligned_cols=230 Identities=26% Similarity=0.363 Sum_probs=201.7
Q ss_pred CCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHH
Q 025672 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (249)
Q Consensus 7 ~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 86 (249)
.+++++|++|||||++|||++++++|+++|++|++++|+.+..+.+.+++...+.++.++++|++|+++++++++++.+.
T Consensus 29 ~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 108 (279)
T 3ctm_A 29 LFSLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEKD 108 (279)
T ss_dssp GGCCTTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHHHH
Confidence 34689999999999999999999999999999999999988888887777766778999999999999999999999999
Q ss_pred hCCccEEEEcCCCCCC-CCCC-CCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc--
Q 025672 87 FGKLDILVNAAAGNFL-VPAE-DLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA-- 162 (249)
Q Consensus 87 ~~~id~vi~~ag~~~~-~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~-- 162 (249)
++++|+||||||.... .++. +.+.++|++.+++|+.+++.+++.+++.|.+++. ++||++||..+..+
T Consensus 109 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~--------~~iv~isS~~~~~~~~ 180 (279)
T 3ctm_A 109 FGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNGK--------GSLIITSSISGKIVNI 180 (279)
T ss_dssp HSCCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--------CEEEEECCCTTSCC--
T ss_pred hCCCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC--------CeEEEECchHhccCCC
Confidence 9999999999998765 6666 7788999999999999999999999999987643 89999999998877
Q ss_pred CccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHH
Q 025672 163 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALY 242 (249)
Q Consensus 163 ~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~ 242 (249)
.++...|+++|++++.++++++.|++ ++| +||+|+||+++|++.. .. +++....+....|.+++.+|+|+|++++|
T Consensus 181 ~~~~~~Y~~sK~a~~~~~~~la~e~~-~~~-~v~~v~Pg~v~t~~~~-~~-~~~~~~~~~~~~p~~~~~~~~dvA~~~~~ 256 (279)
T 3ctm_A 181 PQLQAPYNTAKAACTHLAKSLAIEWA-PFA-RVNTISPGYIDTDITD-FA-SKDMKAKWWQLTPLGREGLTQELVGGYLY 256 (279)
T ss_dssp -CCHHHHHHHHHHHHHHHHHHHHHTT-TTC-EEEEEEECSBSSTTTS-SC-CHHHHHHHHHHSTTCSCBCGGGTHHHHHH
T ss_pred CCCcccHHHHHHHHHHHHHHHHHHhc-ccC-CEEEEeccCCcccccc-cc-ChHHHHHHHHhCCccCCcCHHHHHHHHHH
Confidence 77889999999999999999999998 889 9999999999987652 22 33444455566788999999999999999
Q ss_pred hccCCC
Q 025672 243 LASDAG 248 (249)
Q Consensus 243 l~s~~a 248 (249)
|+++++
T Consensus 257 l~s~~~ 262 (279)
T 3ctm_A 257 LASNAS 262 (279)
T ss_dssp HHSGGG
T ss_pred HhCccc
Confidence 999754
|
| >1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-43 Score=286.61 Aligned_cols=235 Identities=22% Similarity=0.362 Sum_probs=202.3
Q ss_pred CCCCCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHH-hcCCCeeEEEccCCCHHHHHHHHHH
Q 025672 4 PFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALH-SLGIPAIGLEGDVRKREDAVRVVES 82 (249)
Q Consensus 4 ~~~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~ 82 (249)
+...+.+++|++|||||++|||++++++|+++|++|++++|+.+..++..+++. ..+.++.++.+|++|++++++++++
T Consensus 6 ~~~~~~~~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~ 85 (265)
T 1h5q_A 6 PGFTISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQ 85 (265)
T ss_dssp CCEEECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHH
T ss_pred CCCCcccCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHH
Confidence 344556899999999999999999999999999999999998777666666654 2366899999999999999999999
Q ss_pred HHHHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc
Q 025672 83 TINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 162 (249)
Q Consensus 83 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~ 162 (249)
+.+.++++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|.+++. +++||++||..+..+
T Consensus 86 ~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~-------~~~iv~~sS~~~~~~ 158 (265)
T 1h5q_A 86 IDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQ-------KGSIVVTSSMSSQII 158 (265)
T ss_dssp HHHHSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC-------CEEEEEECCGGGTSC
T ss_pred HHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCC-------CceEEEeCCchhhcc
Confidence 9999999999999999887777788899999999999999999999999999976532 388999999887766
Q ss_pred Ccc-------chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHH
Q 025672 163 TWY-------QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWD 235 (249)
Q Consensus 163 ~~~-------~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 235 (249)
.+. ...|+++|++++.++++++.|++ ++||++++|+||+++|++.... .+...+.+....|.+++.+|+|
T Consensus 159 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~d 235 (265)
T 1h5q_A 159 NQSSLNGSLTQVFYNSSKAACSNLVKGLAAEWA-SAGIRVNALSPGYVNTDQTAHM--DKKIRDHQASNIPLNRFAQPEE 235 (265)
T ss_dssp CEEETTEECSCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCCGGGGGS--CHHHHHHHHHTCTTSSCBCGGG
T ss_pred ccccccccccccccHHHHHHHHHHHHHHHHHHH-hcCcEEEEEecCcccccccccc--chhHHHHHHhcCcccCCCCHHH
Confidence 542 67899999999999999999998 8899999999999998764432 2334445556678889999999
Q ss_pred HHHHHHHhccCCC
Q 025672 236 IAMAALYLASDAG 248 (249)
Q Consensus 236 va~~v~~l~s~~a 248 (249)
+|++++||+++++
T Consensus 236 va~~~~~l~~~~~ 248 (265)
T 1h5q_A 236 MTGQAILLLSDHA 248 (265)
T ss_dssp GHHHHHHHHSGGG
T ss_pred HHHHHHhhccCch
Confidence 9999999998754
|
| >1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-42 Score=289.04 Aligned_cols=235 Identities=33% Similarity=0.534 Sum_probs=203.3
Q ss_pred CCCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhc-CCCeeEEEccCCCHHHHHHHHHHHH
Q 025672 6 KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL-GIPAIGLEGDVRKREDAVRVVESTI 84 (249)
Q Consensus 6 ~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~ 84 (249)
+.+++++|++|||||++|||++++++|+++|++|++++|+.+.++++.+++... +.++.++++|++|+++++++++++.
T Consensus 20 ~~~~l~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 99 (302)
T 1w6u_A 20 PPNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELI 99 (302)
T ss_dssp CTTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CcccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHH
Confidence 455689999999999999999999999999999999999998888888887654 6789999999999999999999999
Q ss_pred HHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCc
Q 025672 85 NHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW 164 (249)
Q Consensus 85 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~ 164 (249)
+.++++|+||||||.....++.+.+.++|+..+++|+.+++++++++++.|.++.. .++||++||..+..+.+
T Consensus 100 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~-------~~~iv~isS~~~~~~~~ 172 (302)
T 1w6u_A 100 KVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQK-------GAAFLSITTIYAETGSG 172 (302)
T ss_dssp HHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC-------CEEEEEECCTHHHHCCT
T ss_pred HHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcC-------CCEEEEEcccccccCCC
Confidence 99999999999999877777778899999999999999999999999999974322 38999999999988888
Q ss_pred cchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChH-HHHHhhhhhhcccCCCCHHHHHHHHHHh
Q 025672 165 YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPE-EIRSKATDYMAAYKFGEKWDIAMAALYL 243 (249)
Q Consensus 165 ~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~dva~~v~~l 243 (249)
+...|++||++++.++++++.|++ ++||++++|+||+++|+.+.....+. ...+.+....|.+++.+|+|+|++++||
T Consensus 173 ~~~~Y~~sK~a~~~~~~~la~~~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dva~~~~~l 251 (302)
T 1w6u_A 173 FVVPSASAKAGVEAMSKSLAAEWG-KYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPCGRLGTVEELANLAAFL 251 (302)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECCBCC------CCTTSHHHHHHHTTCTTSSCBCHHHHHHHHHHH
T ss_pred CcchhHHHHHHHHHHHHHHHHHhh-hcCcEEEEEeeccCCCcchhhhcccchhhHHHHHhcCCcCCCCCHHHHHHHHHHH
Confidence 899999999999999999999998 88999999999999987444333222 2223455567888999999999999999
Q ss_pred ccCCC
Q 025672 244 ASDAG 248 (249)
Q Consensus 244 ~s~~a 248 (249)
+++.+
T Consensus 252 ~~~~~ 256 (302)
T 1w6u_A 252 CSDYA 256 (302)
T ss_dssp TSGGG
T ss_pred cCCcc
Confidence 98753
|
| >3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-43 Score=288.43 Aligned_cols=227 Identities=24% Similarity=0.247 Sum_probs=195.1
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhC
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 88 (249)
.+++|++|||||++|||++++++|+++|++|++++|+.+.++++.+++ +.++.++++|++|+++++++++++.+.++
T Consensus 2 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g 78 (281)
T 3m1a_A 2 SESAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAY---PDRAEAISLDVTDGERIDVVAADVLARYG 78 (281)
T ss_dssp --CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHC---TTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc---cCCceEEEeeCCCHHHHHHHHHHHHHhCC
Confidence 357899999999999999999999999999999999998888766554 56799999999999999999999999999
Q ss_pred CccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchh
Q 025672 89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH 168 (249)
Q Consensus 89 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~ 168 (249)
++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|.+++. ++||++||..+..+.++...
T Consensus 79 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~--------~~iv~~sS~~~~~~~~~~~~ 150 (281)
T 3m1a_A 79 RVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERGS--------GSVVNISSFGGQLSFAGFSA 150 (281)
T ss_dssp CCSEEEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--------EEEEEECCGGGTCCCTTCHH
T ss_pred CCCEEEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--------CEEEEEcCccccCCCCCchH
Confidence 9999999999887788889999999999999999999999999999987653 89999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCC------Ch---H--HHHHhhhhhhcccCCCCHHHHH
Q 025672 169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL------AP---E--EIRSKATDYMAAYKFGEKWDIA 237 (249)
Q Consensus 169 y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~------~~---~--~~~~~~~~~~~~~~~~~~~dva 237 (249)
|++||+++++|+++++.|++ ++||+||+|+||+++|++..... .+ . ..........+.+++.+|+|+|
T Consensus 151 Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva 229 (281)
T 3m1a_A 151 YSATKAALEQLSEGLADEVA-PFGIKVLIVEPGAFRTNLFGKGAAYFSEENPAYAEKVGPTRQLVQGSDGSQPGDPAKAA 229 (281)
T ss_dssp HHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECCBCCTTTCCCCEEECCBCTTTHHHHHHHHHHHHC-----CBCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhh-ccCcEEEEEecCccccccccccccccCCcchhhHHHhHHHHHHHhhccCCCCCCHHHHH
Confidence 99999999999999999998 88999999999999987643211 11 1 1122334456778899999999
Q ss_pred HHHHHhccCC
Q 025672 238 MAALYLASDA 247 (249)
Q Consensus 238 ~~v~~l~s~~ 247 (249)
+++++++++.
T Consensus 230 ~a~~~~~~~~ 239 (281)
T 3m1a_A 230 AAIRLALDTE 239 (281)
T ss_dssp HHHHHHHHSS
T ss_pred HHHHHHHhCC
Confidence 9999999765
|
| >2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-42 Score=281.77 Aligned_cols=229 Identities=29% Similarity=0.407 Sum_probs=203.4
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHh-cCCCeeEEEccCCCHHHHHHHHHHHHHH
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHS-LGIPAIGLEGDVRKREDAVRVVESTINH 86 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 86 (249)
+++++|+++||||++|||++++++|+++|++|++++|+.++++.+.+++.. .+.++.++.+|++|+++++++++++.+.
T Consensus 3 ~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 82 (248)
T 2pnf_A 3 IKLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNL 82 (248)
T ss_dssp CCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHh
Confidence 357899999999999999999999999999999999999888888777764 4668999999999999999999999999
Q ss_pred hCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccc
Q 025672 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ 166 (249)
Q Consensus 87 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~ 166 (249)
++++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|.+++. ++||++||..+..+.++.
T Consensus 83 ~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~--------~~iv~~sS~~~~~~~~~~ 154 (248)
T 2pnf_A 83 VDGIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRW--------GRIVNISSVVGFTGNVGQ 154 (248)
T ss_dssp SSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHTC--------EEEEEECCHHHHHCCTTC
T ss_pred cCCCCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCC--------cEEEEEccHHhcCCCCCC
Confidence 999999999999877777778899999999999999999999999999987653 899999999888888889
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhccC
Q 025672 167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246 (249)
Q Consensus 167 ~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~ 246 (249)
..|+++|++++.+++.++.|++ ++||++++|+||+++|++... . .+...+.+....|.+++.+|+|+|+++.||+++
T Consensus 155 ~~Y~~sK~a~~~~~~~la~e~~-~~~i~v~~v~Pg~v~t~~~~~-~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~ 231 (248)
T 2pnf_A 155 VNYSTTKAGLIGFTKSLAKELA-PRNVLVNAVAPGFIETDMTAV-L-SEEIKQKYKEQIPLGRFGSPEEVANVVLFLCSE 231 (248)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCCGGGGG-S-CHHHHHHHHHTCTTSSCBCHHHHHHHHHHHHSG
T ss_pred chHHHHHHHHHHHHHHHHHHhc-ccCeEEEEEEeceecCchhhh-c-cHHHHHHHHhcCCCCCccCHHHHHHHHHHHhCc
Confidence 9999999999999999999998 889999999999999875432 2 233444455566788899999999999999987
Q ss_pred C
Q 025672 247 A 247 (249)
Q Consensus 247 ~ 247 (249)
.
T Consensus 232 ~ 232 (248)
T 2pnf_A 232 L 232 (248)
T ss_dssp G
T ss_pred h
Confidence 5
|
| >2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-43 Score=285.70 Aligned_cols=230 Identities=28% Similarity=0.376 Sum_probs=196.4
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcC-------CCeeEEEccCCCHHHHHHHHH
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG-------IPAIGLEGDVRKREDAVRVVE 81 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~-------~~~~~~~~Dl~~~~~~~~~~~ 81 (249)
++++|++|||||++|||++++++|+++|++|++++|+.+.++++.+++...+ .++.++.+|++|+++++++++
T Consensus 4 ~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~ 83 (264)
T 2pd6_A 4 RLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLE 83 (264)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHHH
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHHH
Confidence 4679999999999999999999999999999999999988887777665444 578999999999999999999
Q ss_pred HHHHHhCCc-cEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccc
Q 025672 82 STINHFGKL-DILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY 160 (249)
Q Consensus 82 ~~~~~~~~i-d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~ 160 (249)
++.+.++++ |+||||||.....++.+.+.++|++.+++|+.++++++++++|.|.+++. .|+||++||..+.
T Consensus 84 ~~~~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~-------~g~iv~isS~~~~ 156 (264)
T 2pd6_A 84 QVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGC-------RGSIINISSIVGK 156 (264)
T ss_dssp HHHHHHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC-------CEEEEEECCTHHH
T ss_pred HHHHHhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCC-------CceEEEECChhhc
Confidence 999999998 99999999887777788899999999999999999999999999987541 2889999999988
Q ss_pred ccCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHH
Q 025672 161 TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAA 240 (249)
Q Consensus 161 ~~~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v 240 (249)
.+.++...|+++|++++.|++.++.|++ ++||++++|+||+++|++... . .+...+.+....|.+++.+|+|+|+++
T Consensus 157 ~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~-~-~~~~~~~~~~~~~~~~~~~~~dva~~~ 233 (264)
T 2pd6_A 157 VGNVGQTNYAASKAGVIGLTQTAARELG-RHGIRCNSVLPGFIATPMTQK-V-PQKVVDKITEMIPMGHLGDPEDVADVV 233 (264)
T ss_dssp HCCTTBHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCSCC------------CTGGGCTTCSCBCHHHHHHHH
T ss_pred cCCCCChhhHHHHHHHHHHHHHHHHHhh-hcCeEEEEEeeecccccchhh-c-CHHHHHHHHHhCCCCCCCCHHHHHHHH
Confidence 8888999999999999999999999998 889999999999999875432 2 223344455567788999999999999
Q ss_pred HHhccCCC
Q 025672 241 LYLASDAG 248 (249)
Q Consensus 241 ~~l~s~~a 248 (249)
.||+++++
T Consensus 234 ~~l~~~~~ 241 (264)
T 2pd6_A 234 AFLASEDS 241 (264)
T ss_dssp HHHHSGGG
T ss_pred HHHcCCcc
Confidence 99998753
|
| >2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-42 Score=284.28 Aligned_cols=233 Identities=22% Similarity=0.309 Sum_probs=195.1
Q ss_pred CCCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHH
Q 025672 6 KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN 85 (249)
Q Consensus 6 ~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 85 (249)
..+++++|++|||||++|||++++++|+++|++|++++|+.++++++.+++ +.++.++++|++|+++++++++++.+
T Consensus 6 ~~~~~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~ 82 (265)
T 2o23_A 6 ACRSVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL---GNNCVFAPADVTSEKDVQTALALAKG 82 (265)
T ss_dssp --CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred cccCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHh---CCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 345688999999999999999999999999999999999998888877776 45799999999999999999999999
Q ss_pred HhCCccEEEEcCCCCCCCCCC------CCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccc
Q 025672 86 HFGKLDILVNAAAGNFLVPAE------DLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH 159 (249)
Q Consensus 86 ~~~~id~vi~~ag~~~~~~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~ 159 (249)
.++++|+||||||.....++. +.+.++|++.+++|+.++++++++++|.|.++... .....++||++||..+
T Consensus 83 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~--~~~~~~~iv~isS~~~ 160 (265)
T 2o23_A 83 KFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPD--QGGQRGVIINTASVAA 160 (265)
T ss_dssp HHSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCC--TTSCCEEEEEECCTHH
T ss_pred HCCCCCEEEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccc--cCCCCcEEEEeCChhh
Confidence 999999999999987654443 36889999999999999999999999999775211 0111489999999999
Q ss_pred cccCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcc-cCCCCHHHHHH
Q 025672 160 YTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAA-YKFGEKWDIAM 238 (249)
Q Consensus 160 ~~~~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~ 238 (249)
..+.++...|+++|++++.|+++++.|++ ++||+||+|+||+++|++... . ++...+.+....|. +++.+|+|+|+
T Consensus 161 ~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~dva~ 237 (265)
T 2o23_A 161 FEGQVGQAAYSASKGGIVGMTLPIARDLA-PIGIRVMTIAPGLFGTPLLTS-L-PEKVCNFLASQVPFPSRLGDPAEYAH 237 (265)
T ss_dssp HHCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECCBCCC------------CHHHHTCSSSCSCBCHHHHHH
T ss_pred cCCCCCCchhHHHHHHHHHHHHHHHHHHh-hcCcEEEEEEeccccCccccc-c-CHHHHHHHHHcCCCcCCCCCHHHHHH
Confidence 98888899999999999999999999998 889999999999999875432 2 22233344555677 88999999999
Q ss_pred HHHHhccC
Q 025672 239 AALYLASD 246 (249)
Q Consensus 239 ~v~~l~s~ 246 (249)
+++||+++
T Consensus 238 ~~~~l~~~ 245 (265)
T 2o23_A 238 LVQAIIEN 245 (265)
T ss_dssp HHHHHHHC
T ss_pred HHHHHhhc
Confidence 99999864
|
| >4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-43 Score=287.70 Aligned_cols=216 Identities=19% Similarity=0.240 Sum_probs=189.4
Q ss_pred CCCcEEEEecCCCchhHHHHHHHHH-cCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhC
Q 025672 10 LKGKVALLTGGGSGIGFEISLQLGK-HGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (249)
Q Consensus 10 l~~k~~lItGa~~giG~~~a~~l~~-~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 88 (249)
.++|++|||||++|||++++++|++ .|++|++++|+.+. ....+.++++|++|+++++++++.+ + ++
T Consensus 2 ~~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~----------~~~~~~~~~~Dv~~~~~v~~~~~~~-~-~~ 69 (244)
T 4e4y_A 2 NAMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSF----------SAENLKFIKADLTKQQDITNVLDII-K-NV 69 (244)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCC----------CCTTEEEEECCTTCHHHHHHHHHHT-T-TC
T ss_pred CCCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEecccccc----------ccccceEEecCcCCHHHHHHHHHHH-H-hC
Confidence 3689999999999999999999999 78899999988651 1246789999999999999999654 3 78
Q ss_pred CccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchh
Q 025672 89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH 168 (249)
Q Consensus 89 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~ 168 (249)
++|++|||||.....++.+.+.++|++.+++|+.++++++++++|.|.+. |+||++||..+..+.++...
T Consensus 70 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~----------g~iv~~sS~~~~~~~~~~~~ 139 (244)
T 4e4y_A 70 SFDGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVG----------ASIVFNGSDQCFIAKPNSFA 139 (244)
T ss_dssp CEEEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEE----------EEEEEECCGGGTCCCTTBHH
T ss_pred CCCEEEECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccC----------cEEEEECCHHHccCCCCCch
Confidence 99999999999888888999999999999999999999999999998653 78999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCC---------ChHHHHHhhhhhhcccCCCCHHHHHHH
Q 025672 169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL---------APEEIRSKATDYMAAYKFGEKWDIAMA 239 (249)
Q Consensus 169 y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~dva~~ 239 (249)
|++||+|+.+|+++++.|++ ++||+||+|+||+|+|++..... ..++..+......|.+|+.+|+|+|++
T Consensus 140 Y~asKaa~~~~~~~la~e~~-~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~ 218 (244)
T 4e4y_A 140 YTLSKGAIAQMTKSLALDLA-KYQIRVNTVCPGTVDTDLYRNLIQKYANNVGISFDEAQKQEEKEFPLNRIAQPQEIAEL 218 (244)
T ss_dssp HHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEESCBCCHHHHHHHHHHHHHHTCCHHHHHHHHHTTSTTSSCBCHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHH-HcCeEEEEEecCccCchhhHHHHHhhhhhcCCCHHHHHHHHhhcCCCCCCcCHHHHHHH
Confidence 99999999999999999998 88999999999999987543221 122345566777899999999999999
Q ss_pred HHHhccCCC
Q 025672 240 ALYLASDAG 248 (249)
Q Consensus 240 v~~l~s~~a 248 (249)
++||+++++
T Consensus 219 v~~l~s~~~ 227 (244)
T 4e4y_A 219 VIFLLSDKS 227 (244)
T ss_dssp HHHHHSGGG
T ss_pred HHHHhcCcc
Confidence 999999865
|
| >1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-42 Score=280.88 Aligned_cols=225 Identities=28% Similarity=0.387 Sum_probs=200.3
Q ss_pred CcEEEEecCCCchhHHHHHHHHHcCCeEEE-EeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCc
Q 025672 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAI-MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (249)
Q Consensus 12 ~k~~lItGa~~giG~~~a~~l~~~G~~v~l-~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 90 (249)
+|++|||||++|||++++++|+++|++|++ .+|+.+..+.+.+++...+.++.++.+|++|+++++++++++.+.++++
T Consensus 1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 80 (244)
T 1edo_A 1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTI 80 (244)
T ss_dssp CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCC
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence 589999999999999999999999999998 4888888888888887667789999999999999999999999999999
Q ss_pred cEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhhH
Q 025672 91 DILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVS 170 (249)
Q Consensus 91 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~ 170 (249)
|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|.+++. ++||++||..+..+.++...|+
T Consensus 81 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--------~~iv~~sS~~~~~~~~~~~~Y~ 152 (244)
T 1edo_A 81 DVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRK--------GRIINIASVVGLIGNIGQANYA 152 (244)
T ss_dssp SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--------EEEEEECCTHHHHCCTTCHHHH
T ss_pred CEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCC--------CEEEEECChhhcCCCCCCccch
Confidence 99999999887777778899999999999999999999999999987653 8999999999888888899999
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhc-cCC
Q 025672 171 AAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLA-SDA 247 (249)
Q Consensus 171 ~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~-s~~ 247 (249)
++|+++++++++++.|++ ++||++++|+||+++|++... .. +...+.+....|.+++.+|+|+|+++.||+ ++.
T Consensus 153 ~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~-~~-~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~ 227 (244)
T 1edo_A 153 AAKAGVIGFSKTAAREGA-SRNINVNVVCPGFIASDMTAK-LG-EDMEKKILGTIPLGRTGQPENVAGLVEFLALSPA 227 (244)
T ss_dssp HHHHHHHHHHHHHHHHHH-TTTEEEEEEEECSBCSHHHHT-TC-HHHHHHHHTSCTTCSCBCHHHHHHHHHHHHHCSG
T ss_pred hhHHHHHHHHHHHHHHhh-hcCCEEEEEeeCccccchhhh-cC-hHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCc
Confidence 999999999999999998 889999999999999875433 22 333444556678889999999999999999 654
|
| >1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-42 Score=278.77 Aligned_cols=231 Identities=28% Similarity=0.379 Sum_probs=201.3
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhC
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 88 (249)
++++|++|||||++|||++++++|+++|++|++++|+.+.++...+++... .++.++.+|++|+++++++++++.+.++
T Consensus 3 ~~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (251)
T 1zk4_A 3 RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTP-DQIQFFQHDSSDEDGWTKLFDATEKAFG 81 (251)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCT-TTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhcc-CceEEEECCCCCHHHHHHHHHHHHHHhC
Confidence 478999999999999999999999999999999999988888777777432 5789999999999999999999999999
Q ss_pred CccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchh
Q 025672 89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH 168 (249)
Q Consensus 89 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~ 168 (249)
++|+||||||.....++.+.+.++|++.+++|+.+++++++.++|.|.+++. +++||++||..+..+.++...
T Consensus 82 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~-------~~~iv~isS~~~~~~~~~~~~ 154 (251)
T 1zk4_A 82 PVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGL-------GASIINMSSIEGFVGDPSLGA 154 (251)
T ss_dssp SCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSS-------CEEEEEECCGGGTSCCTTCHH
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCC-------CCEEEEeCCchhccCCCCCcc
Confidence 9999999999887777888999999999999999999999999999976532 278999999999988889999
Q ss_pred hHHHHHHHHHHHHHHHHHhc-CCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhccCC
Q 025672 169 VSAAKAAVDSITRSLALEWG-TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247 (249)
Q Consensus 169 y~~sK~a~~~l~~~la~e~~-~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~ 247 (249)
|+++|++++.++++++.|+. .++||++++|+||+++|++... ...+.....+....|.+++.+|+|+|+++.||+++.
T Consensus 155 Y~~sK~a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~~~~-~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~ 233 (251)
T 1zk4_A 155 YNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDD-LPGAEEAMSQRTKTPMGHIGEPNDIAYICVYLASNE 233 (251)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHT-STTHHHHHTSTTTCTTSSCBCHHHHHHHHHHHHSGG
T ss_pred chHHHHHHHHHHHHHHHHhcccCCCeEEEEEeeCcCcchhhhh-cCchhhhHHHhhcCCCCCCcCHHHHHHHHHHHcCcc
Confidence 99999999999999999974 2569999999999999876543 222333333445568889999999999999999875
Q ss_pred C
Q 025672 248 G 248 (249)
Q Consensus 248 a 248 (249)
+
T Consensus 234 ~ 234 (251)
T 1zk4_A 234 S 234 (251)
T ss_dssp G
T ss_pred c
Confidence 3
|
| >1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-42 Score=288.08 Aligned_cols=233 Identities=33% Similarity=0.536 Sum_probs=202.4
Q ss_pred CCCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHh-----cCCCeeEEEccCCCHHHHHHHH
Q 025672 6 KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHS-----LGIPAIGLEGDVRKREDAVRVV 80 (249)
Q Consensus 6 ~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~-----~~~~~~~~~~Dl~~~~~~~~~~ 80 (249)
....+++|+++||||++|||++++++|+++|++|++++|+.+.++.+.+++.. .+.++.++.+|++|++++++++
T Consensus 12 ~~~~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~ 91 (303)
T 1yxm_A 12 APGLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLV 91 (303)
T ss_dssp CTTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHH
T ss_pred CcCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHH
Confidence 34468899999999999999999999999999999999999888888888865 4668999999999999999999
Q ss_pred HHHHHHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccc
Q 025672 81 ESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY 160 (249)
Q Consensus 81 ~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~ 160 (249)
+++.+.++++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.+.++. +++||++||.. .
T Consensus 92 ~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~--------~~~iv~isS~~-~ 162 (303)
T 1yxm_A 92 KSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEH--------GGSIVNIIVPT-K 162 (303)
T ss_dssp HHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHH--------CEEEEEECCCC-T
T ss_pred HHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhc--------CCeEEEEEeec-c
Confidence 99999999999999999987667777889999999999999999999999999654433 38899999988 7
Q ss_pred ccCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCC--hHHHHHhhhhhhcccCCCCHHHHHH
Q 025672 161 TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA--PEEIRSKATDYMAAYKFGEKWDIAM 238 (249)
Q Consensus 161 ~~~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~ 238 (249)
.+.++...|+++|+++.+++++++.|+. ++||++++|+||+++|+....... .+...+.+....|.+++.+|+|+|+
T Consensus 163 ~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ 241 (303)
T 1yxm_A 163 AGFPLAVHSGAARAGVYNLTKSLALEWA-CSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGVPEEVSS 241 (303)
T ss_dssp TCCTTCHHHHHHHHHHHHHHHHHHHHTG-GGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGGSTTSSCBCTHHHHH
T ss_pred cCCCcchhhHHHHHHHHHHHHHHHHHhc-ccCeEEEEEecCCcccchhhhhccccchHHHHHHHhcCcccCCCCHHHHHH
Confidence 7788889999999999999999999998 889999999999999874322221 1233344455678889999999999
Q ss_pred HHHHhccCCC
Q 025672 239 AALYLASDAG 248 (249)
Q Consensus 239 ~v~~l~s~~a 248 (249)
+++||+++.+
T Consensus 242 ~i~~l~~~~~ 251 (303)
T 1yxm_A 242 VVCFLLSPAA 251 (303)
T ss_dssp HHHHHHSGGG
T ss_pred HHHHHhCccc
Confidence 9999998754
|
| >1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-43 Score=286.24 Aligned_cols=219 Identities=18% Similarity=0.160 Sum_probs=188.7
Q ss_pred CcEEEEecCCCchhHHHHHHHHHcCCeEEEE-e--CCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhC
Q 025672 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIM-G--RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (249)
Q Consensus 12 ~k~~lItGa~~giG~~~a~~l~~~G~~v~l~-~--r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 88 (249)
+|++|||||++|||++++++|+++|++|+++ + |+.++++++.+++ .+ +|+.|+++++++++++.+.++
T Consensus 1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~--~~-------~~~~~~~~v~~~~~~~~~~~g 71 (244)
T 1zmo_A 1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESEN--PG-------TIALAEQKPERLVDATLQHGE 71 (244)
T ss_dssp -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHS--TT-------EEECCCCCGGGHHHHHGGGSS
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHh--CC-------CcccCHHHHHHHHHHHHHHcC
Confidence 5899999999999999999999999999999 6 9988887776665 12 233488889999999999999
Q ss_pred CccEEEEcCCCCCC---CCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCcc
Q 025672 89 KLDILVNAAAGNFL---VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY 165 (249)
Q Consensus 89 ~id~vi~~ag~~~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~ 165 (249)
++|+||||||.... .++.+.+.++|++.+++|+.++++++++++|.|.+++. |+||++||..+..+.++
T Consensus 72 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~--------g~iv~isS~~~~~~~~~ 143 (244)
T 1zmo_A 72 AIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAGG--------ASVIFITSSVGKKPLAY 143 (244)
T ss_dssp CEEEEEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTC--------EEEEEECCGGGTSCCTT
T ss_pred CCCEEEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCC--------cEEEEECChhhCCCCCC
Confidence 99999999998877 78889999999999999999999999999999987653 89999999999999899
Q ss_pred chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccccccc--CCCChHHHHHhhhh-hhcccCCCCHHHHHHHHHH
Q 025672 166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGV--SKLAPEEIRSKATD-YMAAYKFGEKWDIAMAALY 242 (249)
Q Consensus 166 ~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~~dva~~v~~ 242 (249)
...|++||+++.+|+++++.|++ ++||+||+|+||+++|++.. .....++..+.+.. ..|++|+.+|||+|++++|
T Consensus 144 ~~~Y~asK~a~~~~~~~la~e~~-~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pe~vA~~v~~ 222 (244)
T 1zmo_A 144 NPLYGPARAATVALVESAAKTLS-RDGILLYAIGPNFFNNPTYFPTSDWENNPELRERVDRDVPLGRLGRPDEMGALITF 222 (244)
T ss_dssp CTTHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEESSBCBTTTBCHHHHHHCHHHHHHHHHHCTTCSCBCHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHh-hcCcEEEEEeeCCCcCCcccccccccchHHHHHHHhcCCCCCCCcCHHHHHHHHHH
Confidence 99999999999999999999998 88999999999999987641 11111122333444 6788999999999999999
Q ss_pred hccCCC
Q 025672 243 LASDAG 248 (249)
Q Consensus 243 l~s~~a 248 (249)
|+++++
T Consensus 223 l~s~~~ 228 (244)
T 1zmo_A 223 LASRRA 228 (244)
T ss_dssp HHTTTT
T ss_pred HcCccc
Confidence 999865
|
| >3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-42 Score=290.20 Aligned_cols=237 Identities=22% Similarity=0.259 Sum_probs=193.0
Q ss_pred CCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCC--CeeEEEccCCCHHHHHHHHHHHH
Q 025672 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGI--PAIGLEGDVRKREDAVRVVESTI 84 (249)
Q Consensus 7 ~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~--~~~~~~~Dl~~~~~~~~~~~~~~ 84 (249)
.+++++|++|||||++|||++++++|+++|++|++++|+.++++++.+++...+. ++.++.+|++|+++++++++++.
T Consensus 3 m~~l~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~ 82 (319)
T 3ioy_A 3 LKDFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVE 82 (319)
T ss_dssp CCCCTTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHH
T ss_pred ccCCCCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHH
Confidence 4568899999999999999999999999999999999999999999988876555 79999999999999999999999
Q ss_pred HHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCc
Q 025672 85 NHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW 164 (249)
Q Consensus 85 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~ 164 (249)
+.++++|+||||||+....++.+.+.++|+..+++|+.|+++++++++|.|.++.... ...+|+||++||..+..+.+
T Consensus 83 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~--~~~~g~iV~isS~a~~~~~~ 160 (319)
T 3ioy_A 83 ARFGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAG--EQKGGHVVNTASMAAFLAAG 160 (319)
T ss_dssp HHTCCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTT--SCCCCEEEEECCGGGTCCCS
T ss_pred HhCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhcc--CCCCcEEEEecccccccCCC
Confidence 9999999999999998888888999999999999999999999999999997640000 00148999999999999999
Q ss_pred cchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHH-h--------hhhhhccc-CCCCHH
Q 025672 165 YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRS-K--------ATDYMAAY-KFGEKW 234 (249)
Q Consensus 165 ~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~-~--------~~~~~~~~-~~~~~~ 234 (249)
+...|++||+|+.+|+++++.|+. ++||+|++|+||+|+|++............ . .....+.. ...+|+
T Consensus 161 ~~~~Y~aSKaal~~~~~~la~e~~-~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe 239 (319)
T 3ioy_A 161 SPGIYNTTKFAVRGLSESLHYSLL-KYEIGVSVLCPGLVKSYIYASDDIRPDALKGEVKPVDKTAVERLAGVHEFGMEPD 239 (319)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEECCCCBC-----------------------------CCGGGSSBCHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhh-hcCCEEEEEEcCeEccCcccccccCchhhcccccchhHHHHHHHHHhhhcCCCHH
Confidence 999999999999999999999998 889999999999999876543221111100 0 01111111 226999
Q ss_pred HHHHHHHHhccC
Q 025672 235 DIAMAALYLASD 246 (249)
Q Consensus 235 dva~~v~~l~s~ 246 (249)
|+|+.++.++..
T Consensus 240 ~vA~~~~~al~~ 251 (319)
T 3ioy_A 240 VIGARVIEAMKA 251 (319)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHHHc
Confidence 999999988754
|
| >1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-43 Score=284.29 Aligned_cols=218 Identities=18% Similarity=0.236 Sum_probs=190.9
Q ss_pred cEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCccE
Q 025672 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI 92 (249)
Q Consensus 13 k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ 92 (249)
|++|||||++|||++++++|+++|++|++++|+.++++.+.+ +...+.++.++ |+++++++++++.+.++++|+
T Consensus 2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-l~~~~~~~~~~-----d~~~v~~~~~~~~~~~g~iD~ 75 (254)
T 1zmt_A 2 STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEA-FAETYPQLKPM-----SEQEPAELIEAVTSAYGQVDV 75 (254)
T ss_dssp CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHH-HHHHCTTSEEC-----CCCSHHHHHHHHHHHHSCCCE
T ss_pred eEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-HHhcCCcEEEE-----CHHHHHHHHHHHHHHhCCCCE
Confidence 689999999999999999999999999999999988877766 65555565554 777899999999999999999
Q ss_pred EEEcCCCC-CCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhhHH
Q 025672 93 LVNAAAGN-FLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSA 171 (249)
Q Consensus 93 vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~~ 171 (249)
||||||.. ...++.+.+.++|++.+++|+.++++++++++|.|.+++. |+||++||..+..+.++...|++
T Consensus 76 lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~--------g~iv~isS~~~~~~~~~~~~Y~~ 147 (254)
T 1zmt_A 76 LVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKS--------GHIIFITSATPFGPWKELSTYTS 147 (254)
T ss_dssp EEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--------CEEEEECCSTTTSCCTTCHHHHH
T ss_pred EEECCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCC--------cEEEEECCcccccCCCCchHHHH
Confidence 99999987 6677888999999999999999999999999999987653 89999999999999889999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCeEEEEEecCcc---------ccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHH
Q 025672 172 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPI---------KDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALY 242 (249)
Q Consensus 172 sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v---------~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~ 242 (249)
||+++.+|+++++.|++ ++||+||+|+||+| +|++... .++..+.+....|.+|+.+|+|+|++++|
T Consensus 148 sK~a~~~~~~~la~e~~-~~gi~v~~v~PG~v~~~~~~~~~~T~~~~~---~~~~~~~~~~~~p~~~~~~p~dvA~~v~~ 223 (254)
T 1zmt_A 148 ARAGACTLANALSKELG-EYNIPVFAIGPNYLHSEDSPYFYPTEPWKT---NPEHVAHVKKVTALQRLGTQKELGELVAF 223 (254)
T ss_dssp HHHHHHHHHHHHHHHHG-GGTCCEEEEEESSBCCBTCCSSCBHHHHTT---CHHHHHHHHHHSSSSSCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhh-hcCcEEEEEecCccccccccccCCCccccc---ChHHHHHHhccCCCCCCcCHHHHHHHHHH
Confidence 99999999999999998 88999999999999 7654322 12334445566788999999999999999
Q ss_pred hccCCC
Q 025672 243 LASDAG 248 (249)
Q Consensus 243 l~s~~a 248 (249)
|+++++
T Consensus 224 l~s~~~ 229 (254)
T 1zmt_A 224 LASGSC 229 (254)
T ss_dssp HHTTSC
T ss_pred HhCccc
Confidence 999865
|
| >3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-42 Score=290.72 Aligned_cols=192 Identities=24% Similarity=0.338 Sum_probs=168.6
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCC-----cchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHH
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR-----KTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVES 82 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~-----~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~ 82 (249)
|++++|++|||||++|||++++++|+++|++|++++|+ .+.++.+.+.+...+.++.++++|++|++++++++++
T Consensus 1 M~m~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~ 80 (324)
T 3u9l_A 1 MVMSKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQ 80 (324)
T ss_dssp ----CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHH
Confidence 35678999999999999999999999999999987765 4556677777766678899999999999999999999
Q ss_pred HHHHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc
Q 025672 83 TINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 162 (249)
Q Consensus 83 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~ 162 (249)
+.+.+|++|+||||||+....++.+.+.++|++.+++|+.|+++++++++|.|.+++. |+||++||..+..+
T Consensus 81 ~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~~--------g~iV~isS~~~~~~ 152 (324)
T 3u9l_A 81 IIGEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQKH--------GLLIWISSSSSAGG 152 (324)
T ss_dssp HHHHHSCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--------EEEEEECCGGGTSC
T ss_pred HHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC--------CEEEEEecchhccC
Confidence 9999999999999999988888889999999999999999999999999999987654 89999999988844
Q ss_pred -CccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccc
Q 025672 163 -TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAG 208 (249)
Q Consensus 163 -~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~ 208 (249)
.++...|++||+|+++|+++++.|++ ++||+||+|+||++.|+..
T Consensus 153 ~~~~~~~Y~asKaa~~~~~~~la~el~-~~gI~v~~v~PG~v~t~~~ 198 (324)
T 3u9l_A 153 TPPYLAPYFAAKAAMDAIAVQYARELS-RWGIETSIIVPGAFTSGTN 198 (324)
T ss_dssp CCSSCHHHHHHHHHHHHHHHHHHHHHH-TTTEEEEEEEECCC-----
T ss_pred CCCcchhHHHHHHHHHHHHHHHHHHhh-hhCcEEEEEECCccccCch
Confidence 56678999999999999999999998 8999999999999986543
|
| >2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-41 Score=278.83 Aligned_cols=233 Identities=25% Similarity=0.299 Sum_probs=199.1
Q ss_pred CCCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHH
Q 025672 6 KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN 85 (249)
Q Consensus 6 ~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 85 (249)
+.+.+++|++|||||++|||++++++|+++|++|++++|+.+..+.+.+++.. ..++.++.+|++|+++++++++++.+
T Consensus 10 ~~~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~ 88 (278)
T 2bgk_A 10 STNRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGS-PDVISFVHCDVTKDEDVRNLVDTTIA 88 (278)
T ss_dssp -CCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC-TTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CcccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCC-CCceEEEECCCCCHHHHHHHHHHHHH
Confidence 34568899999999999999999999999999999999998877777777643 23789999999999999999999999
Q ss_pred HhCCccEEEEcCCCCCC--CCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC
Q 025672 86 HFGKLDILVNAAAGNFL--VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT 163 (249)
Q Consensus 86 ~~~~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~ 163 (249)
.++++|+||||||.... .++.+.+.++|++.+++|+.++++++++++|.|.+++. ++||++||..+..+.
T Consensus 89 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--------~~iv~isS~~~~~~~ 160 (278)
T 2bgk_A 89 KHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKK--------GSIVFTASISSFTAG 160 (278)
T ss_dssp HHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTC--------EEEEEECCGGGTCCC
T ss_pred HcCCCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCC--------CeEEEEeeccccCCC
Confidence 99999999999997643 56778899999999999999999999999999987653 899999999998887
Q ss_pred c-cchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCC-hHHHHHhhhhh--hcccCCCCHHHHHHH
Q 025672 164 W-YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA-PEEIRSKATDY--MAAYKFGEKWDIAMA 239 (249)
Q Consensus 164 ~-~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~dva~~ 239 (249)
+ +...|+++|++++.+++.++.|++ ++||++++|+||+++|++...... .+...+.+... .+.+++.+|+|+|++
T Consensus 161 ~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~ 239 (278)
T 2bgk_A 161 EGVSHVYTATKHAVLGLTTSLCTELG-EYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVADA 239 (278)
T ss_dssp TTSCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTCSSCSCCCCHHHHHHH
T ss_pred CCCCcchHHHHHHHHHHHHHHHHHHh-hcCcEEEEEEeceecchhhhhhcccchhHHHHhhhcccccccccCCHHHHHHH
Confidence 7 788999999999999999999998 889999999999999876544322 22333333332 245789999999999
Q ss_pred HHHhccCCC
Q 025672 240 ALYLASDAG 248 (249)
Q Consensus 240 v~~l~s~~a 248 (249)
++||+++++
T Consensus 240 ~~~l~~~~~ 248 (278)
T 2bgk_A 240 VAYLAGDES 248 (278)
T ss_dssp HHHHHSGGG
T ss_pred HHHHcCccc
Confidence 999998753
|
| >2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-41 Score=275.56 Aligned_cols=218 Identities=18% Similarity=0.254 Sum_probs=196.3
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCC-------eEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHH
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGA-------AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVEST 83 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~-------~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 83 (249)
++|++|||||++|||++++++|+++|+ +|++++|+.+.++.+.+++...+.++.++.+|++|+++++++++++
T Consensus 1 ~~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~ 80 (244)
T 2bd0_A 1 MKHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHI 80 (244)
T ss_dssp -CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHHH
Confidence 378999999999999999999999999 9999999998888888888776778999999999999999999999
Q ss_pred HHHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC
Q 025672 84 INHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT 163 (249)
Q Consensus 84 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~ 163 (249)
.+.++++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|.+++. ++||++||..+..+.
T Consensus 81 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--------~~iv~isS~~~~~~~ 152 (244)
T 2bd0_A 81 VERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHS--------GHIFFITSVAATKAF 152 (244)
T ss_dssp HHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--------EEEEEECCGGGTSCC
T ss_pred HHhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCC--------CEEEEEecchhcCCC
Confidence 999999999999999887777788899999999999999999999999999987643 899999999999998
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHh
Q 025672 164 WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYL 243 (249)
Q Consensus 164 ~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l 243 (249)
++...|+++|+++++|+++++.|++ ++||++++|+||+++|++.... ..+. ..++.+|+|+|++++|+
T Consensus 153 ~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~~-~~~~----------~~~~~~~~dva~~~~~l 220 (244)
T 2bd0_A 153 RHSSIYCMSKFGQRGLVETMRLYAR-KCNVRITDVQPGAVYTPMWGKV-DDEM----------QALMMMPEDIAAPVVQA 220 (244)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHT-TTTEEEEEEEECCBCSTTTCCC-CSTT----------GGGSBCHHHHHHHHHHH
T ss_pred CCCchhHHHHHHHHHHHHHHHHHhh-ccCcEEEEEECCCccchhhhhc-cccc----------cccCCCHHHHHHHHHHH
Confidence 8999999999999999999999998 8899999999999998764332 1110 13688999999999999
Q ss_pred ccCCC
Q 025672 244 ASDAG 248 (249)
Q Consensus 244 ~s~~a 248 (249)
+++.+
T Consensus 221 ~~~~~ 225 (244)
T 2bd0_A 221 YLQPS 225 (244)
T ss_dssp HTSCT
T ss_pred HhCCc
Confidence 98765
|
| >3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-44 Score=301.80 Aligned_cols=228 Identities=21% Similarity=0.217 Sum_probs=190.9
Q ss_pred CCcEEEEecCCC--chhHHHHHHHHHcCCeEEEEeCCc---------chHHHHHHHHHhcC---CCeeEEEccCCCH--H
Q 025672 11 KGKVALLTGGGS--GIGFEISLQLGKHGAAIAIMGRRK---------TVLRSAVAALHSLG---IPAIGLEGDVRKR--E 74 (249)
Q Consensus 11 ~~k~~lItGa~~--giG~~~a~~l~~~G~~v~l~~r~~---------~~~~~~~~~~~~~~---~~~~~~~~Dl~~~--~ 74 (249)
++|++||||+++ |||+++|++|+++|++|++++|+. ++++.....+...+ ..+.++.||+++. +
T Consensus 1 ~~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~ 80 (329)
T 3lt0_A 1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAN 80 (329)
T ss_dssp CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSGG
T ss_pred CCcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccccchh
Confidence 479999999986 999999999999999999777654 22222222221112 2367889999988 8
Q ss_pred ------------------HHHHHHHHHHHHhCCccEEEEcCCCC--CCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHH
Q 025672 75 ------------------DAVRVVESTINHFGKLDILVNAAAGN--FLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKY 134 (249)
Q Consensus 75 ------------------~~~~~~~~~~~~~~~id~vi~~ag~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 134 (249)
+++++++++.+.++++|++|||||+. ...++.+.+.++|++++++|+.++++++++++|.
T Consensus 81 ~~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~ 160 (329)
T 3lt0_A 81 DIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNI 160 (329)
T ss_dssp GCCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred hhhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 99999999999999999999999974 3578889999999999999999999999999999
Q ss_pred HHhcCCCCCCCCCCceEEEeccccccccCccch-hhHHHHHHHHHHHHHHHHHhcCC-CCeEEEEEecCccccccccCCC
Q 025672 135 LKKGGRGQASSSSGGIIINISATLHYTATWYQI-HVSAAKAAVDSITRSLALEWGTD-YAIRVNGIAPGPIKDTAGVSKL 212 (249)
Q Consensus 135 ~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~-~y~~sK~a~~~l~~~la~e~~~~-~gi~v~~v~pG~v~t~~~~~~~ 212 (249)
|.++ |+||++||..+..+.++.. .|++||+|+.+|+++|+.|++ + +||+||+|+||+|+|++.....
T Consensus 161 m~~~----------g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~~~~~la~el~-~~~gI~vn~v~PG~v~T~~~~~~~ 229 (329)
T 3lt0_A 161 MKPQ----------SSIISLTYHASQKVVPGYGGGMSSAKAALESDTRVLAYHLG-RNYNIRINTISAGPLKSRAATAIN 229 (329)
T ss_dssp EEEE----------EEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHH-HHHCCEEEEEEECCCCCHHHHTCC
T ss_pred HhhC----------CeEEEEeCccccCCCCcchHHHHHHHHHHHHHHHHHHHHhC-CccCeEEEEEecceeechhHhhhh
Confidence 9764 8899999999999998885 999999999999999999998 7 8999999999999987654321
Q ss_pred C-------------------------------------------hHHHHHhhhhhhcccCCCCHHHHHHHHHHhccCCCC
Q 025672 213 A-------------------------------------------PEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGQ 249 (249)
Q Consensus 213 ~-------------------------------------------~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~a~ 249 (249)
. .+++.+......|++|+++|+|+|++++||+|++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~v~fL~s~~a~ 309 (329)
T 3lt0_A 230 KLNNTYENNTNQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLRQKLLSTDIGSVASFLLSRESR 309 (329)
T ss_dssp ------------------------------------------CHHHHHHHHHHHHSSSCSCCCHHHHHHHHHHHHSGGGT
T ss_pred hhcccccccccccccccccccchhhcccccchhhhhhhhcccchhHHHHHHHhhcCcccCcCCHHHHHHHHHHHhCchhc
Confidence 1 012245566778999999999999999999998753
|
| >3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-43 Score=299.42 Aligned_cols=226 Identities=15% Similarity=0.059 Sum_probs=189.6
Q ss_pred CCcEEEEecCCCchhHHHHHHHHH-cCCeEEEEeCCcchHH------------HHHHHHHhcCCCeeEEEccCCCHHHHH
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGK-HGAAIAIMGRRKTVLR------------SAVAALHSLGIPAIGLEGDVRKREDAV 77 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~-~G~~v~l~~r~~~~~~------------~~~~~~~~~~~~~~~~~~Dl~~~~~~~ 77 (249)
.+|++|||||++|||+++|+.|++ .|++|++++|+.+.++ .+.+++...|.++..+.+|++|+++++
T Consensus 60 ~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dvtd~~~v~ 139 (422)
T 3s8m_A 60 GPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAFSDAARA 139 (422)
T ss_dssp SCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHHH
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecCCCHHHHH
Confidence 589999999999999999999999 9999999999876543 234666677888999999999999999
Q ss_pred HHHHHHHHHh-CCccEEEEcCCCC-------------CCCCC---------------------CCCCHHHHHHHHhhhhH
Q 025672 78 RVVESTINHF-GKLDILVNAAAGN-------------FLVPA---------------------EDLSPNGFRTVIEIDSV 122 (249)
Q Consensus 78 ~~~~~~~~~~-~~id~vi~~ag~~-------------~~~~~---------------------~~~~~~~~~~~~~~n~~ 122 (249)
++++++.+.+ |+||+||||||.. ...++ .+.+.++|+.++++|..
T Consensus 140 ~~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~v~Vn~~ 219 (422)
T 3s8m_A 140 QVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEIEDTITVMGG 219 (422)
T ss_dssp HHHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSS
T ss_pred HHHHHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCCHHHHHHHHHhhch
Confidence 9999999999 9999999999972 23344 36789999999999999
Q ss_pred HHH-HHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccc--hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEe
Q 025672 123 GTF-IMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ--IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIA 199 (249)
Q Consensus 123 ~~~-~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~--~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~ 199 (249)
+.| .+++++.+.+...+ +|+||++||..+..+.+.+ ..|++||+|+.+|+|+|+.||+ ++|||||+|+
T Consensus 220 ~~~~~~~~a~~~~~m~~~--------gG~IVniSSi~g~~~~p~~~~~aY~ASKaAl~~lTrsLA~Ela-~~GIRVNaVa 290 (422)
T 3s8m_A 220 QDWELWIDALEGAGVLAD--------GARSVAFSYIGTEITWPIYWHGALGKAKVDLDRTAQRLNARLA-KHGGGANVAV 290 (422)
T ss_dssp HHHHHHHHHHHHTTCEEE--------EEEEEEEEECCCGGGHHHHTSHHHHHHHHHHHHHHHHHHHHHH-TTTCEEEEEE
T ss_pred hHHHHHHHHHHHHHHhhC--------CCEEEEEeCchhhccCCCccchHHHHHHHHHHHHHHHHHHHhC-ccCEEEEEEE
Confidence 987 78888776433222 3899999999999888777 8999999999999999999999 9999999999
Q ss_pred cCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhccCC
Q 025672 200 PGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247 (249)
Q Consensus 200 pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~ 247 (249)
||+|+|++.......+.. ......|++|.++|||+++++.||+||.
T Consensus 291 PG~i~T~~~~~ip~~~~~--~~~~~~~m~r~G~pEdva~~v~~L~sd~ 336 (422)
T 3s8m_A 291 LKSVVTQASAAIPVMPLY--ISMVYKIMKEKGLHEGTIEQLDRLFRER 336 (422)
T ss_dssp ECCCCCTTGGGSTHHHHH--HHHHHHHHHHTTCCCCHHHHHHHHHHHT
T ss_pred cCCCcChhhhcCCCChHH--HHHHHhhhcCCcChHHHHHHHHHHhcch
Confidence 999998765433222221 2222348999999999999999999875
|
| >3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-42 Score=279.56 Aligned_cols=233 Identities=22% Similarity=0.327 Sum_probs=202.8
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCC-cchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR-KTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~-~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
++++|++|||||++|||++++++|+++|++|++++|+ .+.++.+.+++...+.++.++.+|++|+++++++++++.+.+
T Consensus 4 ~l~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 83 (258)
T 3afn_B 4 DLKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVAKF 83 (258)
T ss_dssp GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence 4789999999999999999999999999999999999 888888888887767789999999999999999999999999
Q ss_pred CCccEEEEcCCC-CCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc-cCcc
Q 025672 88 GKLDILVNAAAG-NFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT-ATWY 165 (249)
Q Consensus 88 ~~id~vi~~ag~-~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~-~~~~ 165 (249)
+++|+||||||. ....++.+.+.++|+..+++|+.++++++++++|.|.++... ....++||++||..+.. +.++
T Consensus 84 g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~---~~~~~~iv~~sS~~~~~~~~~~ 160 (258)
T 3afn_B 84 GGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKA---SGQTSAVISTGSIAGHTGGGPG 160 (258)
T ss_dssp SSCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHH---HTSCEEEEEECCTHHHHCCCTT
T ss_pred CCCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccC---CCCCcEEEEecchhhccCCCCC
Confidence 999999999997 556677788999999999999999999999999998753200 00127899999998887 7788
Q ss_pred chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhcc
Q 025672 166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245 (249)
Q Consensus 166 ~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s 245 (249)
...|+++|++++.+++.++.|++ ++||++++|+||+++|++... . .+...+.+....|.+++.+|+|+|++++||++
T Consensus 161 ~~~Y~~sK~a~~~~~~~~~~e~~-~~gi~v~~v~Pg~v~t~~~~~-~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~ 237 (258)
T 3afn_B 161 AGLYGAAKAFLHNVHKNWVDFHT-KDGVRFNIVSPGTVDTAFHAD-K-TQDVRDRISNGIPMGRFGTAEEMAPAFLFFAS 237 (258)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBSSGGGTT-C-CHHHHHHHHTTCTTCSCBCGGGTHHHHHHHHC
T ss_pred chHHHHHHHHHHHHHHHHHHhhc-ccCeEEEEEeCCCcccccccc-c-CHHHHHHHhccCCCCcCCCHHHHHHHHHHHhC
Confidence 89999999999999999999998 889999999999999876433 2 23444555666788899999999999999998
Q ss_pred CC
Q 025672 246 DA 247 (249)
Q Consensus 246 ~~ 247 (249)
+.
T Consensus 238 ~~ 239 (258)
T 3afn_B 238 HL 239 (258)
T ss_dssp HH
T ss_pred cc
Confidence 64
|
| >2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-42 Score=276.54 Aligned_cols=225 Identities=28% Similarity=0.382 Sum_probs=200.2
Q ss_pred CcEEEEecCCCchhHHHHHHHHHcCCeEEEE-eCCcchHHHHHHHHHhcCCCeeE-EEccCCCHHHHHHHHHHHHHHhCC
Q 025672 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIM-GRRKTVLRSAVAALHSLGIPAIG-LEGDVRKREDAVRVVESTINHFGK 89 (249)
Q Consensus 12 ~k~~lItGa~~giG~~~a~~l~~~G~~v~l~-~r~~~~~~~~~~~~~~~~~~~~~-~~~Dl~~~~~~~~~~~~~~~~~~~ 89 (249)
+|+++||||++|||++++++|+++|++|+++ +|+.++++++.+++...+.++.+ +.+|++|.++++++++++.+.+++
T Consensus 1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (245)
T 2ph3_A 1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVLGG 80 (245)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHHTC
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhcCC
Confidence 4789999999999999999999999999998 89988888888888776777777 999999999999999999999999
Q ss_pred ccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhh
Q 025672 90 LDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHV 169 (249)
Q Consensus 90 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y 169 (249)
+|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|.+++. ++||++||..+..+.++...|
T Consensus 81 ~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~--------~~iv~~sS~~~~~~~~~~~~Y 152 (245)
T 2ph3_A 81 LDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKARF--------GRIVNITSVVGILGNPGQANY 152 (245)
T ss_dssp CCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--------EEEEEECCTHHHHCCSSBHHH
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCC--------CEEEEEeChhhccCCCCCcch
Confidence 999999999877777788899999999999999999999999999987653 899999999888888889999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhccCC
Q 025672 170 SAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247 (249)
Q Consensus 170 ~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~ 247 (249)
+++|++++.++++++.|+. +.||++++|+||+++|++... .. +...+.+....|.+++.+|+|+|+++.||+++.
T Consensus 153 ~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~-~~-~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~ 227 (245)
T 2ph3_A 153 VASKAGLIGFTRAVAKEYA-QRGITVNAVAPGFIETEMTER-LP-QEVKEAYLKQIPAGRFGRPEEVAEAVAFLVSEK 227 (245)
T ss_dssp HHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCCHHHHT-SC-HHHHHHHHHTCTTCSCBCHHHHHHHHHHHTSGG
T ss_pred HHHHHHHHHHHHHHHHHHH-HcCeEEEEEEEEeecCcchhh-cC-HHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcc
Confidence 9999999999999999998 889999999999999875432 22 334444555667889999999999999999875
|
| >3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-42 Score=277.19 Aligned_cols=225 Identities=26% Similarity=0.330 Sum_probs=193.4
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
+++++|++|||||++|||++++++|+++|++|++++|+.++++++.+++. .+.++.+|++|+++++++++ .+
T Consensus 3 ~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~D~~~~~~~~~~~~----~~ 74 (244)
T 3d3w_A 3 LFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECP----GIEPVCVDLGDWEATERALG----SV 74 (244)
T ss_dssp CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST----TCEEEECCTTCHHHHHHHHT----TC
T ss_pred cccCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcC----CCCEEEEeCCCHHHHHHHHH----Hc
Confidence 45789999999999999999999999999999999999887776665542 45677999999999998876 46
Q ss_pred CCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch
Q 025672 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 167 (249)
Q Consensus 88 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~ 167 (249)
+++|+||||||.....++.+.+.++|+..+++|+.+++++++++.+.|.+++. .++||++||..+..+.++..
T Consensus 75 ~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~-------~~~iv~~sS~~~~~~~~~~~ 147 (244)
T 3d3w_A 75 GPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGV-------PGAIVNVSSQCSQRAVTNHS 147 (244)
T ss_dssp CCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC-------CEEEEEECCGGGTSCCTTBH
T ss_pred CCCCEEEECCccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCC-------CcEEEEeCchhhccCCCCCc
Confidence 89999999999877777788899999999999999999999999999987541 28899999999998888899
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhccCC
Q 025672 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247 (249)
Q Consensus 168 ~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~ 247 (249)
.|++||++++.++++++.|++ ++||++++|+||+++|++.......+...+.+....|.+++.+|+|+|++++||+++.
T Consensus 148 ~Y~~sK~a~~~~~~~la~e~~-~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~ 226 (244)
T 3d3w_A 148 VYCSTKGALDMLTKVMALELG-PHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNAILFLLSDR 226 (244)
T ss_dssp HHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECCBTTTTHHHHSCSTTHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGG
T ss_pred hHHHHHHHHHHHHHHHHHHhc-ccCeEEEEEEeccccccchhhhccChHHHHHHHhhCCCCCCcCHHHHHHHHHHHcCcc
Confidence 999999999999999999998 8899999999999998764422222223344555678889999999999999999875
Q ss_pred C
Q 025672 248 G 248 (249)
Q Consensus 248 a 248 (249)
+
T Consensus 227 ~ 227 (244)
T 3d3w_A 227 S 227 (244)
T ss_dssp G
T ss_pred c
Confidence 3
|
| >3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-42 Score=293.40 Aligned_cols=226 Identities=12% Similarity=0.038 Sum_probs=190.2
Q ss_pred CCCcEEEEecCCCchhHHHHHHHHH-cCCeEEEEeCCcchHH------------HHHHHHHhcCCCeeEEEccCCCHHHH
Q 025672 10 LKGKVALLTGGGSGIGFEISLQLGK-HGAAIAIMGRRKTVLR------------SAVAALHSLGIPAIGLEGDVRKREDA 76 (249)
Q Consensus 10 l~~k~~lItGa~~giG~~~a~~l~~-~G~~v~l~~r~~~~~~------------~~~~~~~~~~~~~~~~~~Dl~~~~~~ 76 (249)
-.+|++|||||++|||+++++.|++ .|++|++++|+.+..+ ...+++...+.++..+.+|++|++++
T Consensus 45 ~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dvtd~~~v 124 (405)
T 3zu3_A 45 NGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAFSDEIK 124 (405)
T ss_dssp TCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHH
T ss_pred CCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCCCCHHHH
Confidence 4689999999999999999999999 9999999998765432 23445666678899999999999999
Q ss_pred HHHHHHHHHHhCCccEEEEcCCCC-------------CCCCC---------------------CCCCHHHHHHHHhhhhH
Q 025672 77 VRVVESTINHFGKLDILVNAAAGN-------------FLVPA---------------------EDLSPNGFRTVIEIDSV 122 (249)
Q Consensus 77 ~~~~~~~~~~~~~id~vi~~ag~~-------------~~~~~---------------------~~~~~~~~~~~~~~n~~ 122 (249)
+++++++.+.||++|++|||||.. ..+++ .+.+.++|+.++++|..
T Consensus 125 ~~~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~ee~~~~v~Vn~~ 204 (405)
T 3zu3_A 125 QLTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSEIDSTVAVMGG 204 (405)
T ss_dssp HHHHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSS
T ss_pred HHHHHHHHHHcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCCCHHHHHHHHHhhch
Confidence 999999999999999999999974 23455 67899999999999999
Q ss_pred HHH-HHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccc--hhhHHHHHHHHHHHHHHHHHhcCCC-CeEEEEE
Q 025672 123 GTF-IMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ--IHVSAAKAAVDSITRSLALEWGTDY-AIRVNGI 198 (249)
Q Consensus 123 ~~~-~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~--~~y~~sK~a~~~l~~~la~e~~~~~-gi~v~~v 198 (249)
+.| .+++++.+.+.... +|+||++||..+..+.+.+ ..|++||+|+.+|+|+|+.||+ ++ |||||+|
T Consensus 205 ~~~~~~~~~~~~~~m~~~--------gG~IVniSSi~~~~~~p~~~~~aY~AaKaal~~ltrsLA~Ela-~~~GIRVNaV 275 (405)
T 3zu3_A 205 EDWQMWIDALLDAGVLAE--------GAQTTAFTYLGEKITHDIYWNGSIGAAKKDLDQKVLAIRESLA-AHGGGDARVS 275 (405)
T ss_dssp HHHHHHHHHHHHHTCEEE--------EEEEEEEECCCCGGGTTTTTTSHHHHHHHHHHHHHHHHHHHHH-TTTSCEEEEE
T ss_pred hHHHHHHHHHHHHhhhhC--------CcEEEEEeCchhhCcCCCccchHHHHHHHHHHHHHHHHHHHhC-cccCeEEEEE
Confidence 998 78888775432222 3899999999999888877 9999999999999999999999 88 9999999
Q ss_pred ecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhccC
Q 025672 199 APGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246 (249)
Q Consensus 199 ~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~ 246 (249)
+||++.|++.......+.... .-..+++|+++|||+++++.||+||
T Consensus 276 aPG~i~T~~s~~ip~~p~y~~--~l~~~mkr~G~~Ed~a~~i~~L~sd 321 (405)
T 3zu3_A 276 VLKAVVSQASSAIPMMPLYLS--LLFKVMKEKGTHEGCIEQVYSLYKD 321 (405)
T ss_dssp ECCCCCCHHHHTSTTHHHHHH--HHHHHHHHHTCCCCHHHHHHHHHHH
T ss_pred EeCCCcCchhhcCCCCcHHHH--HHHHHHhcCCCcHHHHHHHHHHHhc
Confidence 999999876544333222222 2223799999999999999999987
|
| >1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-41 Score=279.73 Aligned_cols=230 Identities=27% Similarity=0.439 Sum_probs=203.4
Q ss_pred CCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeC-CcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHH
Q 025672 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGR-RKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN 85 (249)
Q Consensus 7 ~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r-~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 85 (249)
.+++++|++|||||++|||++++++|+++|++|++++| +.+.++++.+++...+.++.++.+|++|+++++++++++.+
T Consensus 16 ~~~~~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 95 (274)
T 1ja9_A 16 SKPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVS 95 (274)
T ss_dssp CCTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence 45688999999999999999999999999999999999 77778888888877778899999999999999999999999
Q ss_pred HhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccc-ccCc
Q 025672 86 HFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY-TATW 164 (249)
Q Consensus 86 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~-~~~~ 164 (249)
.++++|+||||||.....++.+.+.++|++.+++|+.+++++++++++.|.+ +++||++||..+. .+.+
T Consensus 96 ~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~----------~~~iv~~sS~~~~~~~~~ 165 (274)
T 1ja9_A 96 HFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRR----------GGRIILTSSIAAVMTGIP 165 (274)
T ss_dssp HHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEE----------EEEEEEECCGGGTCCSCC
T ss_pred HcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh----------CCEEEEEcChHhccCCCC
Confidence 9999999999999877777778899999999999999999999999999863 2789999999888 7778
Q ss_pred cchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccC-----------CCChHHHHHhhhhhhcccCCCCH
Q 025672 165 YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVS-----------KLAPEEIRSKATDYMAAYKFGEK 233 (249)
Q Consensus 165 ~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~ 233 (249)
+...|+++|++++.+++.++.|++ ++||++++|+||+++|++... ....++....+....|.+++.++
T Consensus 166 ~~~~Y~~sK~a~~~~~~~~~~e~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (274)
T 1ja9_A 166 NHALYAGSKAAVEGFCRAFAVDCG-AKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYP 244 (274)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTSTTSSCBCH
T ss_pred CCchHHHHHHHHHHHHHHHHHHhh-hcCeEEEEEeeCcccccchhcccccccccccccCchHHHHHHHHhcCCCCCccCH
Confidence 889999999999999999999998 889999999999999875431 22224444555566788899999
Q ss_pred HHHHHHHHHhccCC
Q 025672 234 WDIAMAALYLASDA 247 (249)
Q Consensus 234 ~dva~~v~~l~s~~ 247 (249)
+|+|++++||+++.
T Consensus 245 ~dva~~i~~l~~~~ 258 (274)
T 1ja9_A 245 ADIGRAVSALCQEE 258 (274)
T ss_dssp HHHHHHHHHHHSGG
T ss_pred HHHHHHHHHHhCcc
Confidence 99999999999875
|
| >3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-42 Score=276.59 Aligned_cols=208 Identities=18% Similarity=0.203 Sum_probs=176.9
Q ss_pred cEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCccE
Q 025672 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI 92 (249)
Q Consensus 13 k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ 92 (249)
|++|||||++|||++++++|+++|++|++++|+.+.++++.+++ +.++.++.+|++|+++++++++++.+. .|+
T Consensus 2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~---~d~ 75 (230)
T 3guy_A 2 SLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCL---SNNVGYRARDLASHQEVEQLFEQLDSI---PST 75 (230)
T ss_dssp -CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTC---SSCCCEEECCTTCHHHHHHHHHSCSSC---CSE
T ss_pred CEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH---hhccCeEeecCCCHHHHHHHHHHHhhc---CCE
Confidence 68999999999999999999999999999999998888777665 567889999999999999999876443 499
Q ss_pred EEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhhHHH
Q 025672 93 LVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAA 172 (249)
Q Consensus 93 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~~s 172 (249)
||||||.....++.+.+.++|++.+++|+.++++++++++|.|.++. ++||++||..+..+.++...|++|
T Consensus 76 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~---------~~iv~isS~~~~~~~~~~~~Y~as 146 (230)
T 3guy_A 76 VVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQP---------VNVVMIMSTAAQQPKAQESTYCAV 146 (230)
T ss_dssp EEECCCCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSC---------CEEEEECCGGGTSCCTTCHHHHHH
T ss_pred EEEeCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC---------CeEEEEeecccCCCCCCCchhHHH
Confidence 99999988888888999999999999999999999999999997753 689999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhccC
Q 025672 173 KAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246 (249)
Q Consensus 173 K~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~ 246 (249)
|+|+.+|+++++.|++ ++||+||+|+||+++|++.... ....+.+++.+|+|+|++++||++.
T Consensus 147 Kaa~~~~~~~la~e~~-~~gi~v~~v~PG~v~t~~~~~~----------~~~~~~~~~~~~~dvA~~i~~l~~~ 209 (230)
T 3guy_A 147 KWAVKGLIESVRLELK-GKPMKIIAVYPGGMATEFWETS----------GKSLDTSSFMSAEDAALMIHGALAN 209 (230)
T ss_dssp HHHHHHHHHHHHHHTT-TSSCEEEEEEECCC--------------------------CCCHHHHHHHHHHHCCE
T ss_pred HHHHHHHHHHHHHHHH-hcCeEEEEEECCcccChHHHhc----------CCCCCcccCCCHHHHHHHHHHHHhC
Confidence 9999999999999998 8999999999999998754321 1234567899999999999999973
|
| >1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-41 Score=277.06 Aligned_cols=224 Identities=17% Similarity=0.195 Sum_probs=198.2
Q ss_pred CCCCCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHH
Q 025672 4 PFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVEST 83 (249)
Q Consensus 4 ~~~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 83 (249)
|...+++++|++|||||++|||++++++|+++|++|++++|+.+.++++.+++...+.++.++.+|++|+++++++++++
T Consensus 23 ~~~~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~ 102 (272)
T 1yb1_A 23 PKRRKSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKV 102 (272)
T ss_dssp --CCCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCcccccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHH
Confidence 34566789999999999999999999999999999999999998888888888877778999999999999999999999
Q ss_pred HHHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC
Q 025672 84 INHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT 163 (249)
Q Consensus 84 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~ 163 (249)
.+.++++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|.+++. ++||++||..+..+.
T Consensus 103 ~~~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~--------~~iv~isS~~~~~~~ 174 (272)
T 1yb1_A 103 KAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNH--------GHIVTVASAAGHVSV 174 (272)
T ss_dssp HHHTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTC--------EEEEEECCCC-CCCH
T ss_pred HHHCCCCcEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC--------CEEEEEechhhcCCC
Confidence 999999999999999877777777888999999999999999999999999987653 899999999999888
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHhc--CCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHH
Q 025672 164 WYQIHVSAAKAAVDSITRSLALEWG--TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAAL 241 (249)
Q Consensus 164 ~~~~~y~~sK~a~~~l~~~la~e~~--~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~ 241 (249)
++...|+++|++++.|+++++.|+. .+.||+|++|+||+++|++... ...+.+++.+|+|+|++++
T Consensus 175 ~~~~~Y~~sK~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~~~~------------~~~~~~~~~~~~dva~~i~ 242 (272)
T 1yb1_A 175 PFLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKN------------PSTSLGPTLEPEEVVNRLM 242 (272)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTC------------THHHHCCCCCHHHHHHHHH
T ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCcccCCcccc------------ccccccCCCCHHHHHHHHH
Confidence 8899999999999999999999984 1468999999999999876321 1124567899999999999
Q ss_pred HhccCC
Q 025672 242 YLASDA 247 (249)
Q Consensus 242 ~l~s~~ 247 (249)
+++.+.
T Consensus 243 ~~~~~~ 248 (272)
T 1yb1_A 243 HGILTE 248 (272)
T ss_dssp HHHHTT
T ss_pred HHHHcC
Confidence 998654
|
| >3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.8e-42 Score=298.38 Aligned_cols=227 Identities=22% Similarity=0.287 Sum_probs=191.8
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
..+++|++|||||++|||++++++|+++|++|++++|+.. .+.+.+..... .+.++.||++|+++++++++++.+.+
T Consensus 209 ~~l~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~-~~~l~~~~~~~--~~~~~~~Dvtd~~~v~~~~~~~~~~~ 285 (454)
T 3u0b_A 209 KPLDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGA-AEDLKRVADKV--GGTALTLDVTADDAVDKITAHVTEHH 285 (454)
T ss_dssp STTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGG-HHHHHHHHHHH--TCEEEECCTTSTTHHHHHHHHHHHHS
T ss_pred cCCCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCcc-HHHHHHHHHHc--CCeEEEEecCCHHHHHHHHHHHHHHc
Confidence 3468999999999999999999999999999999998743 23333333322 35689999999999999999999999
Q ss_pred CC-ccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccc
Q 025672 88 GK-LDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ 166 (249)
Q Consensus 88 ~~-id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~ 166 (249)
++ +|+||||||+....++.+.+.++|+..+++|+.+++++++++.+.|.++. .++||++||..+..+.+++
T Consensus 286 g~~id~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~--------~g~iV~iSS~a~~~g~~g~ 357 (454)
T 3u0b_A 286 GGKVDILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGE--------GGRVIGLSSMAGIAGNRGQ 357 (454)
T ss_dssp TTCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCT--------TCEEEEECCHHHHHCCTTC
T ss_pred CCCceEEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcC--------CCEEEEEeChHhCCCCCCC
Confidence 75 99999999998888888999999999999999999999999999987654 3899999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhccC
Q 025672 167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246 (249)
Q Consensus 167 ~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~ 246 (249)
..|+++|+++++|+++++.|++ ++||+||+|+||+++|++..... ....+......+++|.++|+|+++++.||+|+
T Consensus 358 ~~YaasKaal~~l~~~la~e~~-~~gI~vn~v~PG~v~T~~~~~~~--~~~~~~~~~~~~l~r~g~pedvA~~v~fL~s~ 434 (454)
T 3u0b_A 358 TNYATTKAGMIGLAEALAPVLA-DKGITINAVAPGFIETKMTEAIP--LATREVGRRLNSLFQGGQPVDVAELIAYFASP 434 (454)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH-TTTCEEEEEEECSBCC------------CHHHHHSBTTSSCBCHHHHHHHHHHHHCG
T ss_pred HHHHHHHHHHHHHHHHHHHHhh-hcCcEEEEEEcCcccChhhhhcc--hhhHHHHHhhccccCCCCHHHHHHHHHHHhCC
Confidence 9999999999999999999998 88999999999999987653321 12223344556788999999999999999998
Q ss_pred CC
Q 025672 247 AG 248 (249)
Q Consensus 247 ~a 248 (249)
.+
T Consensus 435 ~a 436 (454)
T 3u0b_A 435 AS 436 (454)
T ss_dssp GG
T ss_pred cc
Confidence 75
|
| >1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=8.8e-41 Score=275.83 Aligned_cols=232 Identities=23% Similarity=0.258 Sum_probs=195.8
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcC--CCeeEEEccCCCHHHHHHHHHHHHHH
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG--IPAIGLEGDVRKREDAVRVVESTINH 86 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~ 86 (249)
.+++|++|||||++|||++++++|+++|++|++++|+.++++++.+++...+ .++.++.+|++|+++++++++++.+.
T Consensus 29 ~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 108 (279)
T 1xg5_A 29 RWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQ 108 (279)
T ss_dssp GGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHh
Confidence 4789999999999999999999999999999999999988888888887654 46889999999999999999999999
Q ss_pred hCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccc--ccCc
Q 025672 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY--TATW 164 (249)
Q Consensus 87 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~--~~~~ 164 (249)
++++|+||||||.....++.+.+.++|+..+++|+.+++.+++.+++.|.+++.. +++||++||..+. .+.+
T Consensus 109 ~g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~------~g~iv~isS~~~~~~~~~~ 182 (279)
T 1xg5_A 109 HSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVD------DGHIININSMSGHRVLPLS 182 (279)
T ss_dssp HCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCC------SCEEEEECCGGGTSCCSCG
T ss_pred CCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC------CceEEEEcChhhcccCCCC
Confidence 9999999999998877788888999999999999999999999999999875410 2789999999887 5667
Q ss_pred cchhhHHHHHHHHHHHHHHHHHhc-CCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHh
Q 025672 165 YQIHVSAAKAAVDSITRSLALEWG-TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYL 243 (249)
Q Consensus 165 ~~~~y~~sK~a~~~l~~~la~e~~-~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l 243 (249)
+...|+++|++++.|++.++.|++ .+.||++++|+||+++|++......... .......+..++.+|+|+|++++||
T Consensus 183 ~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~--~~~~~~~~~~~~~~~~dvA~~i~~l 260 (279)
T 1xg5_A 183 VTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKDP--EKAAATYEQMKCLKPEDVAEAVIYV 260 (279)
T ss_dssp GGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTTCH--HHHHHHHC---CBCHHHHHHHHHHH
T ss_pred CCchhHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccchhhhhhcccCh--hHHhhhcccccCCCHHHHHHHHHHH
Confidence 788999999999999999999985 1569999999999999876322211110 1122334456789999999999999
Q ss_pred ccCCC
Q 025672 244 ASDAG 248 (249)
Q Consensus 244 ~s~~a 248 (249)
+++.+
T Consensus 261 ~~~~~ 265 (279)
T 1xg5_A 261 LSTPA 265 (279)
T ss_dssp HHSCT
T ss_pred hcCCc
Confidence 98754
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-41 Score=306.27 Aligned_cols=217 Identities=25% Similarity=0.336 Sum_probs=188.4
Q ss_pred CCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCc---------chHHHHHHHHHhcCCCeeEEEccCCCHHHHH
Q 025672 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK---------TVLRSAVAALHSLGIPAIGLEGDVRKREDAV 77 (249)
Q Consensus 7 ~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~---------~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~ 77 (249)
.+.+++|+++||||++|||+++|++|+++|++|++.+|+. +.++++.+++...+.+. .+|++|.++++
T Consensus 3 ~~~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~~---~~d~~d~~~~~ 79 (604)
T 2et6_A 3 PVDFKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVA---VADYNNVLDGD 79 (604)
T ss_dssp CCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHTTCEE---EEECCCTTCHH
T ss_pred CCCCCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcCCeE---EEEcCCHHHHH
Confidence 4568899999999999999999999999999999998765 66778888887655443 36999999999
Q ss_pred HHHHHHHHHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccc
Q 025672 78 RVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISAT 157 (249)
Q Consensus 78 ~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~ 157 (249)
++++++.+.||+||++|||||+....++.+.+.++|+.++++|+.|+++++|+++|+|++++. |+||++||.
T Consensus 80 ~~v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~--------G~IVnisS~ 151 (604)
T 2et6_A 80 KIVETAVKNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKY--------GRIVNTSSP 151 (604)
T ss_dssp HHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--------EEEEEECCH
T ss_pred HHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCC--------CEEEEECCH
Confidence 999999999999999999999987788999999999999999999999999999999987653 999999999
Q ss_pred cccccCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHH
Q 025672 158 LHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIA 237 (249)
Q Consensus 158 ~~~~~~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva 237 (249)
.+..+.+++..|++||+|+.+|+++|+.|++ ++||+||+|+|| +.|++...... ++. .+..+|||++
T Consensus 152 ag~~~~~~~~~Y~asKaal~~lt~~la~El~-~~gIrVn~v~Pg-~~T~m~~~~~~-~~~----------~~~~~pe~vA 218 (604)
T 2et6_A 152 AGLYGNFGQANYASAKSALLGFAETLAKEGA-KYNIKANAIAPL-ARSRMTESIMP-PPM----------LEKLGPEKVA 218 (604)
T ss_dssp HHHHCCTTBHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEEC-CCCHHHHTTSC-HHH----------HTTCSHHHHH
T ss_pred HHcCCCCCchHHHHHHHHHHHHHHHHHHHhC-ccCeEEEEEccC-CcCccccccCC-hhh----------hccCCHHHHH
Confidence 9999999999999999999999999999998 899999999998 56654322221 111 1246999999
Q ss_pred HHHHHhccCC
Q 025672 238 MAALYLASDA 247 (249)
Q Consensus 238 ~~v~~l~s~~ 247 (249)
.++.||+|++
T Consensus 219 ~~v~~L~s~~ 228 (604)
T 2et6_A 219 PLVLYLSSAE 228 (604)
T ss_dssp HHHHHHTSSS
T ss_pred HHHHHHhCCc
Confidence 9999999986
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-41 Score=305.44 Aligned_cols=217 Identities=27% Similarity=0.354 Sum_probs=186.7
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
+.+++|+++||||++|||+++|++|+++|++|++.+++ .++++.+++...+.++..+.+|++ ++.+++++++.+.+
T Consensus 318 ~~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~--~~~~~~~~i~~~g~~~~~~~~Dv~--~~~~~~~~~~~~~~ 393 (604)
T 2et6_A 318 VSLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFK--DATKTVDEIKAAGGEAWPDQHDVA--KDSEAIIKNVIDKY 393 (604)
T ss_dssp CCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSS--CCHHHHHHHHHTTCEEEEECCCHH--HHHHHHHHHHHHHH
T ss_pred cccCCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCc--cHHHHHHHHHhcCCeEEEEEcChH--HHHHHHHHHHHHhc
Confidence 46889999999999999999999999999999999874 346677777766777788888884 55678899999999
Q ss_pred CCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch
Q 025672 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 167 (249)
Q Consensus 88 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~ 167 (249)
|++|++|||||+....++.+.+.++|+..+++|+.|+++++++++|+|.+++. |+||++||..+..+.+++.
T Consensus 394 G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~--------G~IVnisS~ag~~~~~~~~ 465 (604)
T 2et6_A 394 GTIDILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQF--------GRIINITSTSGIYGNFGQA 465 (604)
T ss_dssp SCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTC--------EEEEEECCHHHHSCCTTBH
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCC--------CEEEEECChhhccCCCCCh
Confidence 99999999999987788999999999999999999999999999999987653 9999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhccCC
Q 025672 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247 (249)
Q Consensus 168 ~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~ 247 (249)
.|++||+|+.+|+++|+.|++ ++||+||+|+||. +|++..... +++ ..+..+|+|+|.++.||+|++
T Consensus 466 ~Y~asKaal~~lt~~la~El~-~~gIrVn~v~PG~-~T~m~~~~~-~~~----------~~~~~~pe~vA~~v~~L~s~~ 532 (604)
T 2et6_A 466 NYSSSKAGILGLSKTMAIEGA-KNNIKVNIVAPHA-ETAMTLSIM-REQ----------DKNLYHADQVAPLLVYLGTDD 532 (604)
T ss_dssp HHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECC-CCCC--------------------CCSSCGGGTHHHHHHTTSTT
T ss_pred hHHHHHHHHHHHHHHHHHHhC-ccCeEEEEEcCCC-CCccccccC-chh----------hccCCCHHHHHHHHHHHhCCc
Confidence 999999999999999999998 8999999999996 776533211 111 124569999999999999997
Q ss_pred CC
Q 025672 248 GQ 249 (249)
Q Consensus 248 a~ 249 (249)
++
T Consensus 533 ~~ 534 (604)
T 2et6_A 533 VP 534 (604)
T ss_dssp CC
T ss_pred cC
Confidence 63
|
| >1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-41 Score=271.58 Aligned_cols=225 Identities=25% Similarity=0.313 Sum_probs=194.1
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
.++++|++|||||++|||++++++|+++|++|++++|+.++++++.+++ ..+.++.+|++|+++++++++ .+
T Consensus 3 ~~~~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~----~~ 74 (244)
T 1cyd_A 3 LNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKEC----PGIEPVCVDLGDWDATEKALG----GI 74 (244)
T ss_dssp CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS----TTCEEEECCTTCHHHHHHHHT----TC
T ss_pred cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc----cCCCcEEecCCCHHHHHHHHH----Hc
Confidence 3478999999999999999999999999999999999987776665543 246677999999999998876 46
Q ss_pred CCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch
Q 025672 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 167 (249)
Q Consensus 88 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~ 167 (249)
+++|+||||||.....++.+.+.++|++.+++|+.+++++++++++.|.+++. .++||++||..+..+.++..
T Consensus 75 ~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~-------~~~iv~~sS~~~~~~~~~~~ 147 (244)
T 1cyd_A 75 GPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGV-------PGSIVNVSSMVAHVTFPNLI 147 (244)
T ss_dssp CCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC-------CEEEEEECCGGGTSCCTTBH
T ss_pred CCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCC-------CeEEEEEcchhhcCCCCCcc
Confidence 88999999999877777788899999999999999999999999999987541 28899999999998888899
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhccCC
Q 025672 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247 (249)
Q Consensus 168 ~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~ 247 (249)
.|+++|++++.+++.++.|++ ++||++++|+||+++|++.......+.+.+.+....|.+++.+++|+|++++||++++
T Consensus 148 ~Y~~sK~a~~~~~~~~a~~~~-~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~ 226 (244)
T 1cyd_A 148 TYSSTKGAMTMLTKAMAMELG-PHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERHPLRKFAEVEDVVNSILFLLSDR 226 (244)
T ss_dssp HHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECCBTTHHHHHHTCCHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGG
T ss_pred hhHHHHHHHHHHHHHHHHHhh-hcCeEEEEEecCcccCccccccccCHHHHHHHHhcCCccCCCCHHHHHHHHHHHhCch
Confidence 999999999999999999998 8899999999999998754322233444455566678889999999999999999875
Q ss_pred C
Q 025672 248 G 248 (249)
Q Consensus 248 a 248 (249)
+
T Consensus 227 ~ 227 (244)
T 1cyd_A 227 S 227 (244)
T ss_dssp G
T ss_pred h
Confidence 4
|
| >3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-41 Score=271.14 Aligned_cols=202 Identities=26% Similarity=0.317 Sum_probs=178.1
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
+++++|++|||||++|||++++++|+++|++|++++|+.+ +|++|+++++++++++
T Consensus 2 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~--------------------~D~~~~~~v~~~~~~~---- 57 (223)
T 3uce_A 2 MGSDKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG--------------------LDISDEKSVYHYFETI---- 57 (223)
T ss_dssp ---CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT--------------------CCTTCHHHHHHHHHHH----
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc--------------------cCCCCHHHHHHHHHHh----
Confidence 4578999999999999999999999999999999999865 7999999999998754
Q ss_pred CCccEEEEcCCCC-CCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccc
Q 025672 88 GKLDILVNAAAGN-FLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ 166 (249)
Q Consensus 88 ~~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~ 166 (249)
+++|++|||||.. ...++.+.+.++|++.+++|+.++++++++++|.|.+. |+||++||..+..+.++.
T Consensus 58 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~----------g~iv~~sS~~~~~~~~~~ 127 (223)
T 3uce_A 58 GAFDHLIVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQG----------GSITLTSGMLSRKVVANT 127 (223)
T ss_dssp CSEEEEEECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEE----------EEEEEECCGGGTSCCTTC
T ss_pred CCCCEEEECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCC----------eEEEEecchhhccCCCCc
Confidence 8999999999987 56788899999999999999999999999999998653 889999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCC--hHHHHHhhhhhhcccCCCCHHHHHHHHHHhc
Q 025672 167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA--PEEIRSKATDYMAAYKFGEKWDIAMAALYLA 244 (249)
Q Consensus 167 ~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~ 244 (249)
..|+++|+++++|+++++.|++ + |+||+|+||+++|++...... .+...+......|.+|+.+|+|+|++++||+
T Consensus 128 ~~Y~asK~a~~~~~~~la~e~~-~--i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~ 204 (223)
T 3uce_A 128 YVKAAINAAIEATTKVLAKELA-P--IRVNAISPGLTKTEAYKGMNADDRDAMYQRTQSHLPVGKVGEASDIAMAYLFAI 204 (223)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHT-T--SEEEEEEECSBCSGGGTTSCHHHHHHHHHHHHHHSTTCSCBCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHhhc-C--cEEEEEEeCCCcchhhhhcchhhHHHHHHHHhhcCCCCCccCHHHHHHHHHHHc
Confidence 9999999999999999999997 5 999999999999876543322 1233455667789999999999999999999
Q ss_pred cC
Q 025672 245 SD 246 (249)
Q Consensus 245 s~ 246 (249)
++
T Consensus 205 ~~ 206 (223)
T 3uce_A 205 QN 206 (223)
T ss_dssp HC
T ss_pred cC
Confidence 74
|
| >1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-41 Score=274.72 Aligned_cols=219 Identities=21% Similarity=0.280 Sum_probs=183.3
Q ss_pred CCCCCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHH
Q 025672 4 PFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVEST 83 (249)
Q Consensus 4 ~~~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 83 (249)
+....++++|++|||||++|||++++++|+++|++|++++|+.+..+ ++ + ++.++ +|+ .++++++++++
T Consensus 11 ~~~~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~----~~---~-~~~~~-~D~--~~~~~~~~~~~ 79 (249)
T 1o5i_A 11 HHMELGIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLK----RS---G-HRYVV-CDL--RKDLDLLFEKV 79 (249)
T ss_dssp -----CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH----HT---C-SEEEE-CCT--TTCHHHHHHHS
T ss_pred hhHHhccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHH----hh---C-CeEEE-eeH--HHHHHHHHHHh
Confidence 34556689999999999999999999999999999999999873322 22 3 56777 999 56777777655
Q ss_pred HHHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC
Q 025672 84 INHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT 163 (249)
Q Consensus 84 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~ 163 (249)
.++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|.+++. |+||++||..+..+.
T Consensus 80 ----~~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~--------g~iv~isS~~~~~~~ 147 (249)
T 1o5i_A 80 ----KEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGW--------GRIVAITSFSVISPI 147 (249)
T ss_dssp ----CCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--------EEEEEECCGGGTSCC
T ss_pred ----cCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCC--------cEEEEEcchHhcCCC
Confidence 37999999999877777888999999999999999999999999999987653 899999999999998
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHH-hhhhhhcccCCCCHHHHHHHHHH
Q 025672 164 WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRS-KATDYMAAYKFGEKWDIAMAALY 242 (249)
Q Consensus 164 ~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~dva~~v~~ 242 (249)
++...|+++|+++.+|+++++.|++ ++||+||+|+||+++|++.... .+ ...+ .+....|.+|+.+|+|+|++++|
T Consensus 148 ~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~~-~~-~~~~~~~~~~~p~~~~~~~~dvA~~i~~ 224 (249)
T 1o5i_A 148 ENLYTSNSARMALTGFLKTLSFEVA-PYGITVNCVAPGWTETERVKEL-LS-EEKKKQVESQIPMRRMAKPEEIASVVAF 224 (249)
T ss_dssp TTBHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCCTTHHHH-SC-HHHHHHHHTTSTTSSCBCHHHHHHHHHH
T ss_pred CCCchHHHHHHHHHHHHHHHHHHhh-hcCeEEEEEeeCCCccCccccc-ch-hhHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence 8999999999999999999999998 8899999999999998764322 11 2222 44556788999999999999999
Q ss_pred hccCCC
Q 025672 243 LASDAG 248 (249)
Q Consensus 243 l~s~~a 248 (249)
|+++++
T Consensus 225 l~s~~~ 230 (249)
T 1o5i_A 225 LCSEKA 230 (249)
T ss_dssp HHSGGG
T ss_pred HcCccc
Confidence 998754
|
| >2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=8.5e-41 Score=274.24 Aligned_cols=225 Identities=28% Similarity=0.359 Sum_probs=186.8
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhc--CCCeeEEEccCCCHHHHHHHHHHHHHH
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVESTINH 86 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 86 (249)
++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++... +.++.++.+|++|+++++++++++.+.
T Consensus 4 m~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 83 (267)
T 2gdz_A 4 MVNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDH 83 (267)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHH
Confidence 368999999999999999999999999999999999988888777777542 446889999999999999999999999
Q ss_pred hCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccc
Q 025672 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ 166 (249)
Q Consensus 87 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~ 166 (249)
++++|+||||||.. +.++|++.+++|+.+++.+++.++|.|.++... ..|+||++||..+..+.++.
T Consensus 84 ~g~id~lv~~Ag~~--------~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~~~~~~ 150 (267)
T 2gdz_A 84 FGRLDILVNNAGVN--------NEKNWEKTLQINLVSVISGTYLGLDYMSKQNGG-----EGGIIINMSSLAGLMPVAQQ 150 (267)
T ss_dssp HSCCCEEEECCCCC--------CSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTC-----CCEEEEEECCGGGTSCCTTC
T ss_pred cCCCCEEEECCCCC--------ChhhHHHHHhHHHHHHHHHHHHHHHHHHhccCC-----CCCEEEEeCCccccCCCCCC
Confidence 99999999999964 245689999999999999999999999764310 13899999999999988889
Q ss_pred hhhHHHHHHHHHHHHHH--HHHhcCCCCeEEEEEecCccccccccCCCChHHHH------HhhhhhhcccCCCCHHHHHH
Q 025672 167 IHVSAAKAAVDSITRSL--ALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIR------SKATDYMAAYKFGEKWDIAM 238 (249)
Q Consensus 167 ~~y~~sK~a~~~l~~~l--a~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~dva~ 238 (249)
..|++||+++++|++++ +.|++ ++||+||+|+||+++|++.......+... +.+....+..++.+|+|+|+
T Consensus 151 ~~Y~~sK~a~~~~~~~~ala~e~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~ 229 (267)
T 2gdz_A 151 PVYCASKHGIVGFTRSAALAANLM-NSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIAN 229 (267)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH-TCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHHHHHHHCCBCHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHhc-cCCcEEEEEecCcCcchhhhccccccccchhhhHHHHHHHHhccccCCCHHHHHH
Confidence 99999999999999995 68898 88999999999999987543221111111 11111223345779999999
Q ss_pred HHHHhccCC
Q 025672 239 AALYLASDA 247 (249)
Q Consensus 239 ~v~~l~s~~ 247 (249)
+++||++++
T Consensus 230 ~v~~l~s~~ 238 (267)
T 2gdz_A 230 GLITLIEDD 238 (267)
T ss_dssp HHHHHHHCT
T ss_pred HHHHHhcCc
Confidence 999999875
|
| >2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.2e-42 Score=287.06 Aligned_cols=232 Identities=24% Similarity=0.233 Sum_probs=184.2
Q ss_pred CCCCCCCCCcEEEEecC--CCchhHHHHHHHHHcCCeEEEEeCCcc-----------hHHHHHHHHHhcCC---CeeEEE
Q 025672 4 PFKGDILKGKVALLTGG--GSGIGFEISLQLGKHGAAIAIMGRRKT-----------VLRSAVAALHSLGI---PAIGLE 67 (249)
Q Consensus 4 ~~~~~~l~~k~~lItGa--~~giG~~~a~~l~~~G~~v~l~~r~~~-----------~~~~~~~~~~~~~~---~~~~~~ 67 (249)
||..+++++|++||||| ++|||++++++|+++|++|++++|+.. .++++ +++.. +. .+.++.
T Consensus 1 ~M~~~~l~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~ 78 (315)
T 2o2s_A 1 SAFPIDLRGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDED-RKLPD-GSLIEFAGVYP 78 (315)
T ss_dssp ---CCCCTTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTTTHHH-HBCTT-SCBCCCSCEEE
T ss_pred CCCcccCCCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhhhhhh-hhhhc-ccccccccccc
Confidence 34556789999999999 899999999999999999999997641 12222 11211 11 123443
Q ss_pred c------------cCCC--------HHHHHHHHHHHHHHhCCccEEEEcCCCCC--CCCCCCCCHHHHHHHHhhhhHHHH
Q 025672 68 G------------DVRK--------REDAVRVVESTINHFGKLDILVNAAAGNF--LVPAEDLSPNGFRTVIEIDSVGTF 125 (249)
Q Consensus 68 ~------------Dl~~--------~~~~~~~~~~~~~~~~~id~vi~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~ 125 (249)
+ |++| +++++++++++.+.++++|+||||||+.. ..++.+.+.++|++.+++|+.+++
T Consensus 79 ~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~ 158 (315)
T 2o2s_A 79 LDAAFDKPEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFV 158 (315)
T ss_dssp CCTTCSSTTSSCHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHH
T ss_pred ccccccccchhhhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHH
Confidence 3 3443 66899999999999999999999999763 467788899999999999999999
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccc-hhhHHHHHHHHHHHHHHHHHhcCC-CCeEEEEEecCcc
Q 025672 126 IMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ-IHVSAAKAAVDSITRSLALEWGTD-YAIRVNGIAPGPI 203 (249)
Q Consensus 126 ~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~-~~y~~sK~a~~~l~~~la~e~~~~-~gi~v~~v~pG~v 203 (249)
+++++++|.|.+. |+||++||..+..+.++. ..|++||+|+.+|+++++.|++ + +||+||+|+||+|
T Consensus 159 ~l~~~~~~~m~~~----------g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~l~~~la~el~-~~~gIrvn~v~PG~v 227 (315)
T 2o2s_A 159 SLLQHFGPIMNEG----------GSAVTLSYLAAERVVPGYGGGMSSAKAALESDTRTLAWEAG-QKYGVRVNAISAGPL 227 (315)
T ss_dssp HHHHHHSTTEEEE----------EEEEEEEEGGGTSCCTTCCTTHHHHHHHHHHHHHHHHHHHH-HHTCCEEEEEEECCC
T ss_pred HHHHHHHHHHhcC----------CEEEEEecccccccCCCccHHHHHHHHHHHHHHHHHHHHhC-cccCeEEEEEecccc
Confidence 9999999998652 889999999998888777 5899999999999999999997 5 7999999999999
Q ss_pred ccccccCCCC------hHHHHHhhhhhhcccCCCCHHHHHHHHHHhccCCC
Q 025672 204 KDTAGVSKLA------PEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAG 248 (249)
Q Consensus 204 ~t~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~a 248 (249)
+|++...... .+...+.+....|++|+++|+|+|++++||+|+++
T Consensus 228 ~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~ 278 (315)
T 2o2s_A 228 KSRAASAIGKSGEKSFIDYAIDYSYNNAPLRRDLHSDDVGGAALFLLSPLA 278 (315)
T ss_dssp CCHHHHHTTCSSSSCHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHHTSGGG
T ss_pred cchhhhhccccccchhHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhCchh
Confidence 9875432110 12223334456789999999999999999999865
|
| >2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-40 Score=267.25 Aligned_cols=212 Identities=26% Similarity=0.364 Sum_probs=181.2
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCc
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 90 (249)
.+|++|||||++|||++++++|+++|++|++++|+.++++.+.+++. ++.++.+|++|+++++++++++.+.++++
T Consensus 4 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 79 (234)
T 2ehd_A 4 MKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELE----GALPLPGDVREEGDWARAVAAMEEAFGEL 79 (234)
T ss_dssp CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST----TCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhh----hceEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 47899999999999999999999999999999999887777665552 68899999999999999999999999999
Q ss_pred cEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhhH
Q 025672 91 DILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVS 170 (249)
Q Consensus 91 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~ 170 (249)
|+||||||.....++.+.+.++|++.+++|+.+++++++.+++.|.+++. ++||++||..+..+.++...|+
T Consensus 80 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~--------~~iv~isS~~~~~~~~~~~~Y~ 151 (234)
T 2ehd_A 80 SALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRGG--------GTIVNVGSLAGKNPFKGGAAYN 151 (234)
T ss_dssp CEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTC--------EEEEEECCTTTTSCCTTCHHHH
T ss_pred CEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCC--------cEEEEECCchhcCCCCCCchhh
Confidence 99999999877777788899999999999999999999999999987643 8999999999998888899999
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhccCCC
Q 025672 171 AAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAG 248 (249)
Q Consensus 171 ~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~a 248 (249)
++|+++..++++++.|++ ++||++++|+||+++|++.... ++. + .+.+|+|+|++++||+++.+
T Consensus 152 ~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~~--~~~----~-------~~~~~~dvA~~~~~l~~~~~ 215 (234)
T 2ehd_A 152 ASKFGLLGLAGAAMLDLR-EANVRVVNVLPGSVDTGFAGNT--PGQ----A-------WKLKPEDVAQAVLFALEMPG 215 (234)
T ss_dssp HHHHHHHHHHHHHHHHHG-GGTEEEEEEECC-----------------------------CCHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHHHHHHHh-hcCcEEEEEEeCCCcCCccccc--ccc----c-------CCCCHHHHHHHHHHHhCCCc
Confidence 999999999999999998 8899999999999998654321 110 0 15799999999999998764
|
| >1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.3e-42 Score=284.11 Aligned_cols=228 Identities=25% Similarity=0.252 Sum_probs=184.0
Q ss_pred CCCCCcEEEEecCC--CchhHHHHHHHHHcCCeEEEEeCCcc-----------hHHHHHHHHHhcCC--C-eeEEEcc--
Q 025672 8 DILKGKVALLTGGG--SGIGFEISLQLGKHGAAIAIMGRRKT-----------VLRSAVAALHSLGI--P-AIGLEGD-- 69 (249)
Q Consensus 8 ~~l~~k~~lItGa~--~giG~~~a~~l~~~G~~v~l~~r~~~-----------~~~~~~~~~~~~~~--~-~~~~~~D-- 69 (249)
+++++|++|||||+ +|||++++++|+++|++|++++|+.. +++++ +++.. +. . ...+.+|
T Consensus 4 ~~l~~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~ 81 (297)
T 1d7o_A 4 IDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQS-RVLPD-GSLMEIKKVYPLDAV 81 (297)
T ss_dssp CCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGG-GBCTT-SSBCCEEEEEEECTT
T ss_pred cccCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEeeccccchhhhhhhhhhHhhhh-hhhcc-cccccccccccccee
Confidence 45889999999999 99999999999999999999987632 11111 11111 11 0 2333333
Q ss_pred ------C----CC--------HHHHHHHHHHHHHHhCCccEEEEcCCCCC--CCCCCCCCHHHHHHHHhhhhHHHHHHHH
Q 025672 70 ------V----RK--------REDAVRVVESTINHFGKLDILVNAAAGNF--LVPAEDLSPNGFRTVIEIDSVGTFIMCH 129 (249)
Q Consensus 70 ------l----~~--------~~~~~~~~~~~~~~~~~id~vi~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~ 129 (249)
+ +| +++++++++++.+.++++|+||||||+.. ..++.+.+.++|++.+++|+.+++++++
T Consensus 82 ~~~~~dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~ 161 (297)
T 1d7o_A 82 FDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLS 161 (297)
T ss_dssp CCSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred ccchhhhhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHH
Confidence 2 22 67899999999999999999999999754 4677788999999999999999999999
Q ss_pred HHHHHHHhcCCCCCCCCCCceEEEeccccccccCccc-hhhHHHHHHHHHHHHHHHHHhcCC-CCeEEEEEecCcccccc
Q 025672 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ-IHVSAAKAAVDSITRSLALEWGTD-YAIRVNGIAPGPIKDTA 207 (249)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~-~~y~~sK~a~~~l~~~la~e~~~~-~gi~v~~v~pG~v~t~~ 207 (249)
+++|.|.+. |+||++||..+..+.++. ..|++||+|+.+|+++++.|++ + +||+||+|+||+|+|++
T Consensus 162 ~~~~~m~~~----------g~iv~isS~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~-~~~gi~vn~v~PG~v~T~~ 230 (297)
T 1d7o_A 162 HFLPIMNPG----------GASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAG-RKQNIRVNTISAGPLGSRA 230 (297)
T ss_dssp HHGGGEEEE----------EEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHH-HHHCCEEEEEEECCCBCCC
T ss_pred HHHHHhccC----------ceEEEEeccccccCCCCcchHHHHHHHHHHHHHHHHHHHhC-cccCcEEEEEeccccccch
Confidence 999998652 889999999998888877 6899999999999999999997 5 79999999999999886
Q ss_pred ccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhccCCC
Q 025672 208 GVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAG 248 (249)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~a 248 (249)
.......++..+.+....|++|+++|+|+|++++||+++++
T Consensus 231 ~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~l~s~~~ 271 (297)
T 1d7o_A 231 AKAIGFIDTMIEYSYNNAPIQKTLTADEVGNAAAFLVSPLA 271 (297)
T ss_dssp SSCCSHHHHHHHHHHHHSSSCCCBCHHHHHHHHHHHTSGGG
T ss_pred hhhccccHHHHHHhhccCCCCCCCCHHHHHHHHHHHhCccc
Confidence 54322233444455566788999999999999999999864
|
| >2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-42 Score=289.16 Aligned_cols=231 Identities=25% Similarity=0.241 Sum_probs=153.3
Q ss_pred CCCCCCcEEEEecC--CCchhHHHHHHHHHcCCeEEEEeCCc-----------chHH-----------HHHHHHHhcCCC
Q 025672 7 GDILKGKVALLTGG--GSGIGFEISLQLGKHGAAIAIMGRRK-----------TVLR-----------SAVAALHSLGIP 62 (249)
Q Consensus 7 ~~~l~~k~~lItGa--~~giG~~~a~~l~~~G~~v~l~~r~~-----------~~~~-----------~~~~~~~~~~~~ 62 (249)
.+++++|++||||| ++|||++++++|+++|++|++++|+. +.++ ++.+++...+..
T Consensus 4 ~~~l~~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (319)
T 2ptg_A 4 PVDLRGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKPVD 83 (319)
T ss_dssp CCCCTTCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC-------------------------------
T ss_pred ccccCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhcccc
Confidence 45688999999999 89999999999999999999998753 2222 223333332211
Q ss_pred ---eeEEEc------------cCCC--------HHHHHHHHHHHHHHhCCccEEEEcCCCCC--CCCCCCCCHHHHHHHH
Q 025672 63 ---AIGLEG------------DVRK--------REDAVRVVESTINHFGKLDILVNAAAGNF--LVPAEDLSPNGFRTVI 117 (249)
Q Consensus 63 ---~~~~~~------------Dl~~--------~~~~~~~~~~~~~~~~~id~vi~~ag~~~--~~~~~~~~~~~~~~~~ 117 (249)
..++.+ |++| +++++++++++.+.++++|+||||||+.. ..++.+.+.++|++.+
T Consensus 84 ~~~~~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~ 163 (319)
T 2ptg_A 84 LVFDKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYLAAV 163 (319)
T ss_dssp -CCSEEEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCHHHHHHHH
T ss_pred ccccccccccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCHHHHHHHH
Confidence 233333 3333 45899999999999999999999999763 5677889999999999
Q ss_pred hhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccc-hhhHHHHHHHHHHHHHHHHHhcCC-CCeEE
Q 025672 118 EIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ-IHVSAAKAAVDSITRSLALEWGTD-YAIRV 195 (249)
Q Consensus 118 ~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~-~~y~~sK~a~~~l~~~la~e~~~~-~gi~v 195 (249)
++|+.++++++++++|.|.+. |+||++||..+..+.++. ..|++||+|+.+|+++++.|++ + +||+|
T Consensus 164 ~vN~~g~~~l~~~~~~~m~~~----------g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~l~~~la~el~-~~~gIrv 232 (319)
T 2ptg_A 164 SSSSYSFVSLLQHFLPLMKEG----------GSALALSYIASEKVIPGYGGGMSSAKAALESDCRTLAFEAG-RARAVRV 232 (319)
T ss_dssp HHHTHHHHHHHHHHGGGEEEE----------EEEEEEEECC------------------THHHHHHHHHHHH-HHHCCEE
T ss_pred hHhhHHHHHHHHHHHHHHhcC----------ceEEEEeccccccccCccchhhHHHHHHHHHHHHHHHHHhc-cccCeeE
Confidence 999999999999999999652 889999999998888877 6899999999999999999997 6 79999
Q ss_pred EEEecCccccccccCCCC--h----HHHHHhhhhhhcccCCCCHHHHHHHHHHhccCCC
Q 025672 196 NGIAPGPIKDTAGVSKLA--P----EEIRSKATDYMAAYKFGEKWDIAMAALYLASDAG 248 (249)
Q Consensus 196 ~~v~pG~v~t~~~~~~~~--~----~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~a 248 (249)
|+|+||+|+|++...... . +...+.+....|++|+++|||+|++++||+|+++
T Consensus 233 n~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~v~~L~s~~~ 291 (319)
T 2ptg_A 233 NCISAGPLKSRAASAIGKAGDKTFIDLAIDYSEANAPLQKELESDDVGRAALFLLSPLA 291 (319)
T ss_dssp EEEEECCCC-------------------------------CCCHHHHHHHHHHHTSGGG
T ss_pred EEEeeCCccChhhhhcccccchhhHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhCccc
Confidence 999999999876432211 1 1112223345788999999999999999999865
|
| >1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-40 Score=278.87 Aligned_cols=216 Identities=22% Similarity=0.313 Sum_probs=187.4
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEe---------CCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHH
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMG---------RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVR 78 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~---------r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~ 78 (249)
+++++|++|||||++|||++++++|+++|++|++++ |+.++++.+.+++...+.. ..+|+++.+++++
T Consensus 5 ~~l~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~~---~~~D~~~~~~~~~ 81 (319)
T 1gz6_A 5 LRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGK---AVANYDSVEAGEK 81 (319)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCE---EEEECCCGGGHHH
T ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCCe---EEEeCCCHHHHHH
Confidence 568899999999999999999999999999999964 4667778888888765543 3589999999999
Q ss_pred HHHHHHHHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccc
Q 025672 79 VVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL 158 (249)
Q Consensus 79 ~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~ 158 (249)
+++++.+.++++|+||||||+....++.+.+.++|+..+++|+.|+++++++++|.|.+++. |+||++||..
T Consensus 82 ~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~--------grIV~vsS~~ 153 (319)
T 1gz6_A 82 LVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNY--------GRIIMTASAS 153 (319)
T ss_dssp HHHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC--------EEEEEECCHH
T ss_pred HHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCC--------CEEEEECChh
Confidence 99999999999999999999887777778899999999999999999999999999987653 8999999998
Q ss_pred ccccCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHH
Q 025672 159 HYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAM 238 (249)
Q Consensus 159 ~~~~~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~ 238 (249)
+..+.++...|++||+++.+|++.+++|++ ++||+||+|+||++ |++..... ++.. .+..+|+|+|.
T Consensus 154 ~~~~~~~~~~Y~aSK~a~~~~~~~la~el~-~~gI~vn~v~PG~~-t~~~~~~~-~~~~----------~~~~~p~dvA~ 220 (319)
T 1gz6_A 154 GIYGNFGQANYSAAKLGLLGLANTLVIEGR-KNNIHCNTIAPNAG-SRMTETVM-PEDL----------VEALKPEYVAP 220 (319)
T ss_dssp HHHCCTTCHHHHHHHHHHHHHHHHHHHHTG-GGTEEEEEEEEECC-STTTGGGS-CHHH----------HHHSCGGGTHH
T ss_pred hccCCCCCHHHHHHHHHHHHHHHHHHHHhc-ccCEEEEEEeCCCc-cccccccC-Chhh----------hccCCHHHHHH
Confidence 888888899999999999999999999998 88999999999998 65432222 1111 12468999999
Q ss_pred HHHHhccCC
Q 025672 239 AALYLASDA 247 (249)
Q Consensus 239 ~v~~l~s~~ 247 (249)
+++||+++.
T Consensus 221 ~~~~l~s~~ 229 (319)
T 1gz6_A 221 LVLWLCHES 229 (319)
T ss_dssp HHHHHTSTT
T ss_pred HHHHHhCch
Confidence 999999874
|
| >3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-41 Score=274.11 Aligned_cols=218 Identities=20% Similarity=0.219 Sum_probs=159.1
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
|++++|++|||||++|||++++++|++ |++|++++|+.+.++.+.+ ..++.++.+|+++.++ ...+.+..+.+
T Consensus 1 m~l~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~-~~~~~~~~~~~ 73 (245)
T 3e9n_A 1 MSLKKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALAE-----IEGVEPIESDIVKEVL-EEGGVDKLKNL 73 (245)
T ss_dssp -----CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHT-----STTEEEEECCHHHHHH-TSSSCGGGTTC
T ss_pred CCCCCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHh-----hcCCcceecccchHHH-HHHHHHHHHhc
Confidence 357899999999999999999999998 9999999999887766543 2368899999999877 45555555678
Q ss_pred CCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch
Q 025672 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 167 (249)
Q Consensus 88 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~ 167 (249)
+++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|.++. |+||++||..+..+.++..
T Consensus 74 ~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~---------g~iv~isS~~~~~~~~~~~ 144 (245)
T 3e9n_A 74 DHVDTLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAAS---------GCVIYINSGAGNGPHPGNT 144 (245)
T ss_dssp SCCSEEEECC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT---------CEEEEEC----------CH
T ss_pred CCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC---------CeEEEEcCcccccCCCCch
Confidence 8999999999998878888889999999999999999999999999997753 8899999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhccCC
Q 025672 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247 (249)
Q Consensus 168 ~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~ 247 (249)
.|++||+|+.+|+++++.|++ ++||+||+|+||+++|++...... ......+.+++.+|+|+|++++||+++.
T Consensus 145 ~Y~asK~a~~~~~~~la~e~~-~~gi~v~~v~PG~v~t~~~~~~~~------~~~~~~~~~~~~~p~dvA~~i~~l~~~~ 217 (245)
T 3e9n_A 145 IYAASKHALRGLADAFRKEEA-NNGIRVSTVSPGPTNTPMLQGLMD------SQGTNFRPEIYIEPKEIANAIRFVIDAG 217 (245)
T ss_dssp HHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECCC----------------------CCGGGSCHHHHHHHHHHHHTSC
T ss_pred HHHHHHHHHHHHHHHHHHHhh-hcCeEEEEEecCCccCchhhhhhh------hhhcccccccCCCHHHHHHHHHHHHcCC
Confidence 999999999999999999998 889999999999999875433221 1223345677899999999999999865
Q ss_pred C
Q 025672 248 G 248 (249)
Q Consensus 248 a 248 (249)
.
T Consensus 218 ~ 218 (245)
T 3e9n_A 218 E 218 (245)
T ss_dssp T
T ss_pred C
Confidence 3
|
| >3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-40 Score=273.81 Aligned_cols=198 Identities=25% Similarity=0.299 Sum_probs=167.5
Q ss_pred CCCCCCCCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcC-CCeeEEEccCCCH-HHHHH
Q 025672 1 MESPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG-IPAIGLEGDVRKR-EDAVR 78 (249)
Q Consensus 1 ~~~~~~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~-~~~~~ 78 (249)
|....+...+++|++|||||++|||++++++|+++|++|++++|+.+++++..+++...+ .++.++.+|++|+ +++++
T Consensus 1 m~~~~~~~~~~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~ 80 (311)
T 3o26_A 1 MPETCPNTVTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSS 80 (311)
T ss_dssp -----------CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHH
T ss_pred CCCCCCCccCCCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHH
Confidence 444555667889999999999999999999999999999999999999999988887654 5799999999998 99999
Q ss_pred HHHHHHHHhCCccEEEEcCCCCCC------------------------------CCCCCCCHHHHHHHHhhhhHHHHHHH
Q 025672 79 VVESTINHFGKLDILVNAAAGNFL------------------------------VPAEDLSPNGFRTVIEIDSVGTFIMC 128 (249)
Q Consensus 79 ~~~~~~~~~~~id~vi~~ag~~~~------------------------------~~~~~~~~~~~~~~~~~n~~~~~~l~ 128 (249)
+++.+.+.++++|+||||||+... .++.+.+.+++++.+++|+.|+++++
T Consensus 81 ~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~ 160 (311)
T 3o26_A 81 LADFIKTHFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVT 160 (311)
T ss_dssp HHHHHHHHHSSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHH
T ss_pred HHHHHHHhCCCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHH
Confidence 999999999999999999998632 24556788999999999999999999
Q ss_pred HHHHHHHHhcCCCCCCCCCCceEEEeccccccccC-------------------------------------------cc
Q 025672 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTAT-------------------------------------------WY 165 (249)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~-------------------------------------------~~ 165 (249)
++++|.|.++.. |+||++||..+..+. ++
T Consensus 161 ~~~~~~l~~~~~--------~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (311)
T 3o26_A 161 EVLIPLLQLSDS--------PRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSF 232 (311)
T ss_dssp HHHHHHHTTSSS--------CEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTCCSS
T ss_pred HHhhHhhccCCC--------CeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccCccc
Confidence 999999987653 899999999876543 35
Q ss_pred chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccccccc
Q 025672 166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGV 209 (249)
Q Consensus 166 ~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~ 209 (249)
...|++||+|+.+|++++++|+. + |+||+|+||+|+|++..
T Consensus 233 ~~~Y~~SK~a~~~~~~~la~e~~-~--i~v~~v~PG~v~T~~~~ 273 (311)
T 3o26_A 233 GAAYTTSKACLNAYTRVLANKIP-K--FQVNCVCPGLVKTEMNY 273 (311)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHCT-T--SEEEEECCCSBCSGGGT
T ss_pred chhhHHHHHHHHHHHHHHHhhcC-C--ceEEEecCCceecCCcC
Confidence 57899999999999999999986 3 99999999999987643
|
| >1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-40 Score=280.04 Aligned_cols=225 Identities=20% Similarity=0.223 Sum_probs=183.0
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHh------cCCCeeEEEccCCCHHHHHHHHHHHH
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHS------LGIPAIGLEGDVRKREDAVRVVESTI 84 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~------~~~~~~~~~~Dl~~~~~~~~~~~~~~ 84 (249)
++|++|||||++|||++++++|+++|++|++++|+.+.++...+.+.. .+.++.++.+|++|+++++++++++
T Consensus 1 ~~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~- 79 (327)
T 1jtv_A 1 ARTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERV- 79 (327)
T ss_dssp CCEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTC-
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHH-
Confidence 479999999999999999999999999999988876655544443322 2467899999999999999999987
Q ss_pred HHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCc
Q 025672 85 NHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW 164 (249)
Q Consensus 85 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~ 164 (249)
.++++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|.+++. |+||++||..+..+.+
T Consensus 80 -~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~--------g~IV~isS~~~~~~~~ 150 (327)
T 1jtv_A 80 -TEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGS--------GRVLVTGSVGGLMGLP 150 (327)
T ss_dssp -TTSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--------EEEEEEEEGGGTSCCT
T ss_pred -hcCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC--------CEEEEECCcccccCCC
Confidence 3589999999999877777888899999999999999999999999999987653 8999999999999888
Q ss_pred cchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCCh---------HHHHHhhhhh-----hcccCC
Q 025672 165 YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP---------EEIRSKATDY-----MAAYKF 230 (249)
Q Consensus 165 ~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~---------~~~~~~~~~~-----~~~~~~ 230 (249)
....|++||+++++|+++++.|++ ++||+||+|+||+|+|++....... +...+.+... .+++++
T Consensus 151 ~~~~Y~aSK~a~~~~~~~la~el~-~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (327)
T 1jtv_A 151 FNDVYCASKFALEGLCESLAVLLL-PFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFREA 229 (327)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHHHHHHHHhh-hcCcEEEEEEeCcccChHHhhhhhcchhhhccCCHHHHHHHHHHHHHHHHhhhhc
Confidence 899999999999999999999998 8899999999999998765432211 0111111111 234455
Q ss_pred -CCHHHHHHHHHHhccC
Q 025672 231 -GEKWDIAMAALYLASD 246 (249)
Q Consensus 231 -~~~~dva~~v~~l~s~ 246 (249)
.+|+|+|++++|++++
T Consensus 230 ~~~pedvA~~i~~l~~~ 246 (327)
T 1jtv_A 230 AQNPEEVAEVFLTALRA 246 (327)
T ss_dssp CBCHHHHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHHHcC
Confidence 5899999999999874
|
| >3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-40 Score=299.46 Aligned_cols=222 Identities=25% Similarity=0.308 Sum_probs=176.6
Q ss_pred CCCCCCCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeC---------CcchHHHHHHHHHhcCCCeeEEEccCCC
Q 025672 2 ESPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGR---------RKTVLRSAVAALHSLGIPAIGLEGDVRK 72 (249)
Q Consensus 2 ~~~~~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r---------~~~~~~~~~~~~~~~~~~~~~~~~Dl~~ 72 (249)
.++....+++||++|||||++|||+++|++|+++|++|++++| +.+.++.+.+++...+..+ .+|++|
T Consensus 9 ~~~~~~~~l~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~~---~~D~~d 85 (613)
T 3oml_A 9 SSSDGKLRYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGEA---VADYNS 85 (613)
T ss_dssp ------CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTTCCE---EECCCC
T ss_pred cCcccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCCeE---EEEeCC
Confidence 4567778899999999999999999999999999999999988 7777888888887766543 479999
Q ss_pred HHHHHHHHHHHHHHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEE
Q 025672 73 REDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIII 152 (249)
Q Consensus 73 ~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv 152 (249)
.++++++++++.+.++++|+||||||+....++.+.+.++|+..+++|+.|+++++++++|.|++++. |+||
T Consensus 86 ~~~~~~~~~~~~~~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~~--------g~IV 157 (613)
T 3oml_A 86 VIDGAKVIETAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNY--------GRII 157 (613)
T ss_dssp GGGHHHHHC----------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC--------EEEE
T ss_pred HHHHHHHHHHHHHHCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC--------CEEE
Confidence 99999999999999999999999999988888899999999999999999999999999999988754 8999
Q ss_pred EeccccccccCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCC
Q 025672 153 NISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGE 232 (249)
Q Consensus 153 ~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (249)
++||..+..+.++...|++||+|+.+|+++++.|++ ++||+||+|+||++ |++...... +.. .+..+
T Consensus 158 ~isS~a~~~~~~~~~~Y~asKaal~~lt~~la~e~~-~~gI~vn~v~Pg~~-t~~~~~~~~-~~~----------~~~~~ 224 (613)
T 3oml_A 158 MTSSNSGIYGNFGQVNYTAAKMGLIGLANTVAIEGA-RNNVLCNVIVPTAA-SRMTEGILP-DIL----------FNELK 224 (613)
T ss_dssp EECCHHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEEC-------CCCCC-HHH----------HTTCC
T ss_pred EECCHHHcCCCCCChHHHHHHHHHHHHHHHHHHHhC-ccCeEEEEEECCCC-Chhhhhccc-hhh----------hhcCC
Confidence 999999999999999999999999999999999998 89999999999986 555443332 222 23569
Q ss_pred HHHHHHHHHHhccCC
Q 025672 233 KWDIAMAALYLASDA 247 (249)
Q Consensus 233 ~~dva~~v~~l~s~~ 247 (249)
|+|+|.+++||+|+.
T Consensus 225 pedvA~~v~~L~s~~ 239 (613)
T 3oml_A 225 PKLIAPVVAYLCHES 239 (613)
T ss_dssp GGGTHHHHHHTTSTT
T ss_pred HHHHHHHHHHhcCCC
Confidence 999999999999986
|
| >3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-40 Score=267.47 Aligned_cols=205 Identities=20% Similarity=0.172 Sum_probs=180.4
Q ss_pred CCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCC
Q 025672 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK 89 (249)
Q Consensus 10 l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 89 (249)
..+|++|||||++|||++++++|+++|++|++++|+.++.+ -..+.+|++|.++++++++++.+.+++
T Consensus 20 ~m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~------------~~~~~~d~~d~~~v~~~~~~~~~~~g~ 87 (251)
T 3orf_A 20 HMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNA------------DHSFTIKDSGEEEIKSVIEKINSKSIK 87 (251)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTS------------SEEEECSCSSHHHHHHHHHHHHTTTCC
T ss_pred ccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc------------ccceEEEeCCHHHHHHHHHHHHHHcCC
Confidence 44799999999999999999999999999999999976432 235789999999999999999999999
Q ss_pred ccEEEEcCCCCCCCC-CCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchh
Q 025672 90 LDILVNAAAGNFLVP-AEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH 168 (249)
Q Consensus 90 id~vi~~ag~~~~~~-~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~ 168 (249)
+|+||||||.....+ +.+.+.++|++.+++|+.++++++++++|.|.+. |+||++||..+..+.++...
T Consensus 88 iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~----------g~iv~isS~~~~~~~~~~~~ 157 (251)
T 3orf_A 88 VDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQG----------GLFVLTGASAALNRTSGMIA 157 (251)
T ss_dssp EEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE----------EEEEEECCGGGGSCCTTBHH
T ss_pred CCEEEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccC----------CEEEEEechhhccCCCCCch
Confidence 999999999876554 6778889999999999999999999999998652 88999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHhc-CCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhccC
Q 025672 169 VSAAKAAVDSITRSLALEWG-TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246 (249)
Q Consensus 169 y~~sK~a~~~l~~~la~e~~-~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~ 246 (249)
|++||+|++.|+++++.|++ .++||+||+|+||+|+|++. +......+.+++.+|+|+|++++||+++
T Consensus 158 Y~~sKaa~~~~~~~la~e~~~~~~gi~v~~v~PG~v~t~~~----------~~~~~~~~~~~~~~~~dva~~i~~l~~~ 226 (251)
T 3orf_A 158 YGATKAATHHIIKDLASENGGLPAGSTSLGILPVTLDTPTN----------RKYMSDANFDDWTPLSEVAEKLFEWSTN 226 (251)
T ss_dssp HHHHHHHHHHHHHHHTSTTSSSCTTCEEEEEEESCBCCHHH----------HHHCTTSCGGGSBCHHHHHHHHHHHHHC
T ss_pred hHHHHHHHHHHHHHHHHHhcccCCCcEEEEEecCcCcCcch----------hhhcccccccccCCHHHHHHHHHHHhcC
Confidence 99999999999999999963 26799999999999997642 2233344677899999999999999988
|
| >3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-41 Score=277.68 Aligned_cols=219 Identities=19% Similarity=0.177 Sum_probs=175.5
Q ss_pred CCCCCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHH
Q 025672 4 PFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVEST 83 (249)
Q Consensus 4 ~~~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 83 (249)
|...+++++|++|||||++|||++++++|+++|++|++++|+.+++++..+++ +.++.++++|++|+++++++++++
T Consensus 8 ~~~~~~l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~d~~~v~~~~~~~ 84 (291)
T 3rd5_A 8 AADLPSFAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTM---AGQVEVRELDLQDLSSVRRFADGV 84 (291)
T ss_dssp GGGCCCCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTS---SSEEEEEECCTTCHHHHHHHHHTC
T ss_pred hhhccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---cCCeeEEEcCCCCHHHHHHHHHhc
Confidence 34556789999999999999999999999999999999999988877766555 567999999999999999998866
Q ss_pred HHHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc-
Q 025672 84 INHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA- 162 (249)
Q Consensus 84 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~- 162 (249)
+++|+||||||+... ..+.+.++|+..+++|+.++++++++++|.|.+ +||++||..+..+
T Consensus 85 ----~~iD~lv~nAg~~~~--~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~------------riv~isS~~~~~~~ 146 (291)
T 3rd5_A 85 ----SGADVLINNAGIMAV--PYALTVDGFESQIGTNHLGHFALTNLLLPRLTD------------RVVTVSSMAHWPGR 146 (291)
T ss_dssp ----CCEEEEEECCCCCSC--CCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEEE------------EEEEECCGGGTTCC
T ss_pred ----CCCCEEEECCcCCCC--cccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh------------heeEeechhhccCC
Confidence 789999999998643 355678899999999999999999999998854 4999999987754
Q ss_pred ------------CccchhhHHHHHHHHHHHHHHHHHhcCCCC--eEEEEEecCccccccccCCCChHHHHHhhhhhhccc
Q 025672 163 ------------TWYQIHVSAAKAAVDSITRSLALEWGTDYA--IRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAY 228 (249)
Q Consensus 163 ------------~~~~~~y~~sK~a~~~l~~~la~e~~~~~g--i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~ 228 (249)
.++...|++||+++.+|++.+++|++ ++| |+||+|+||+|+|++..... +...+. ....+.+
T Consensus 147 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~g~~i~v~~v~PG~v~T~~~~~~~--~~~~~~-~~~~~~~ 222 (291)
T 3rd5_A 147 INLEDLNWRSRRYSPWLAYSQSKLANLLFTSELQRRLT-AAGSPLRALAAHPGYSHTNLQGASG--RKLGDA-LMSAATR 222 (291)
T ss_dssp CCSSCTTCSSSCCCHHHHHHHHHHHHHHHHHHHHHHHH-HTTCCCEEEEECCSGGGSCC---------------------
T ss_pred CCcccccccccCCCCcchHHHHHHHHHHHHHHHHHHHh-hCCCCEEEEEeeCCCCccccccccc--hHHHHH-HHHHHHH
Confidence 35677899999999999999999998 767 99999999999987654321 222222 2234566
Q ss_pred CCCC-HHHHHHHHHHhccCC
Q 025672 229 KFGE-KWDIAMAALYLASDA 247 (249)
Q Consensus 229 ~~~~-~~dva~~v~~l~s~~ 247 (249)
+... |+|+|++++||++++
T Consensus 223 ~~~~~~~~~A~~~~~l~~~~ 242 (291)
T 3rd5_A 223 VVATDADFGARQTLYAASQD 242 (291)
T ss_dssp --CHHHHHHHHHHHHHHHSC
T ss_pred HHhCCHHHHHHHHHHHHcCC
Confidence 6665 999999999999874
|
| >1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-40 Score=265.46 Aligned_cols=209 Identities=15% Similarity=0.048 Sum_probs=180.4
Q ss_pred CCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh--
Q 025672 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF-- 87 (249)
Q Consensus 10 l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-- 87 (249)
.++|++|||||++|||++++++|+++|++|++++|+.+..+ ....++.+|++|+++++++++++.+.+
T Consensus 5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~----------~~~~~~~~D~~~~~~v~~~~~~~~~~~~~ 74 (241)
T 1dhr_A 5 GEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA----------SASVIVKMTDSFTEQADQVTAEVGKLLGD 74 (241)
T ss_dssp -CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS----------SEEEECCCCSCHHHHHHHHHHHHHHHHTT
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc----------CCcEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence 46899999999999999999999999999999999876532 135788999999999999999999999
Q ss_pred CCccEEEEcCCCCCCCCC-CCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccc
Q 025672 88 GKLDILVNAAAGNFLVPA-EDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ 166 (249)
Q Consensus 88 ~~id~vi~~ag~~~~~~~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~ 166 (249)
+++|+||||||.....++ .+.+.++|++.+++|+.+++.++++++|.|.+. |+||++||..+..+.++.
T Consensus 75 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~----------g~iv~isS~~~~~~~~~~ 144 (241)
T 1dhr_A 75 QKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEG----------GLLTLAGAKAALDGTPGM 144 (241)
T ss_dssp CCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE----------EEEEEECCGGGGSCCTTB
T ss_pred CCCCEEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccC----------CEEEEECCHHHccCCCCc
Confidence 799999999998777777 778889999999999999999999999998642 889999999999998999
Q ss_pred hhhHHHHHHHHHHHHHHHHHhc-CCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhcc
Q 025672 167 IHVSAAKAAVDSITRSLALEWG-TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245 (249)
Q Consensus 167 ~~y~~sK~a~~~l~~~la~e~~-~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s 245 (249)
..|+++|+++++|+++++.|++ .++||+||+|+||+++|++....... ....++.+|+|+|++++||++
T Consensus 145 ~~Y~asK~a~~~~~~~la~e~~~~~~gi~v~~v~PG~v~T~~~~~~~~~----------~~~~~~~~~~~vA~~v~~l~~ 214 (241)
T 1dhr_A 145 IGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRKSMPE----------ADFSSWTPLEFLVETFHDWIT 214 (241)
T ss_dssp HHHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHHHHHSTT----------SCGGGSEEHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEecCcccCccccccCcc----------hhhccCCCHHHHHHHHHHHhc
Confidence 9999999999999999999984 15699999999999998753211110 112345678999999999998
Q ss_pred CCC
Q 025672 246 DAG 248 (249)
Q Consensus 246 ~~a 248 (249)
+++
T Consensus 215 ~~~ 217 (241)
T 1dhr_A 215 GNK 217 (241)
T ss_dssp TTT
T ss_pred CCC
Confidence 865
|
| >1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-39 Score=261.37 Aligned_cols=215 Identities=18% Similarity=0.169 Sum_probs=178.9
Q ss_pred CCCcEEEEecCCCchhHHHHHHHHHcC--CeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 10 LKGKVALLTGGGSGIGFEISLQLGKHG--AAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 10 l~~k~~lItGa~~giG~~~a~~l~~~G--~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
|++|++|||||++|||++++++|+++| ++|++++|+.+.++.+.+. .+.++.++.+|++|+++++++++++.+.+
T Consensus 1 m~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 77 (250)
T 1yo6_A 1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSI---KDSRVHVLPLTVTCDKSLDTFVSKVGEIV 77 (250)
T ss_dssp CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTC---CCTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHhc---cCCceEEEEeecCCHHHHHHHHHHHHHhc
Confidence 358999999999999999999999999 9999999998877665332 35689999999999999999999999999
Q ss_pred C--CccEEEEcCCCCC-CCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc------CCCCCCCCCCceEEEecccc
Q 025672 88 G--KLDILVNAAAGNF-LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKG------GRGQASSSSGGIIINISATL 158 (249)
Q Consensus 88 ~--~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~------~~~~~~~~~~g~iv~iss~~ 158 (249)
+ ++|+||||||... ..++.+.+.++++..+++|+.+++++++++++.|.++ +.. ....++||++||..
T Consensus 78 g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~---~~~~~~iv~isS~~ 154 (250)
T 1yo6_A 78 GSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQL---SVSRAAVITISSGL 154 (250)
T ss_dssp GGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCC---CTTTCEEEEECCGG
T ss_pred CCCCCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcc---cCCCcEEEEeccCc
Confidence 8 9999999999877 6788888999999999999999999999999999765 200 01138999999998
Q ss_pred ccccC-------ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCC
Q 025672 159 HYTAT-------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFG 231 (249)
Q Consensus 159 ~~~~~-------~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (249)
+..+. ++...|+++|++++.|+++++.|++ ++||++++|+||+++|++... .++.
T Consensus 155 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~-----------------~~~~ 216 (250)
T 1yo6_A 155 GSITDNTSGSAQFPVLAYRMSKAAINMFGRTLAVDLK-DDNVLVVNFCPGWVQTNLGGK-----------------NAAL 216 (250)
T ss_dssp GCSTTCCSTTSSSCBHHHHHHHHHHHHHHHHHHHHTG-GGTCEEEEEECCCC----------------------------
T ss_pred cccCCcccccccCCccHHHHHHHHHHHHHHHHHHHhc-cCCeEEEEEcCCceecCCCCC-----------------CCCC
Confidence 87775 5788999999999999999999998 889999999999999875321 1467
Q ss_pred CHHHHHHHHHHhccCCC
Q 025672 232 EKWDIAMAALYLASDAG 248 (249)
Q Consensus 232 ~~~dva~~v~~l~s~~a 248 (249)
+|+|+|+.+++++++..
T Consensus 217 ~~~~~a~~~~~~~~~~~ 233 (250)
T 1yo6_A 217 TVEQSTAELISSFNKLD 233 (250)
T ss_dssp --HHHHHHHHHHHTTCC
T ss_pred CHHHHHHHHHHHHhccc
Confidence 89999999999998753
|
| >1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-38 Score=263.31 Aligned_cols=220 Identities=22% Similarity=0.278 Sum_probs=188.9
Q ss_pred CCCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCC-CeeEEEccCCCHHHHHHHHHHHH
Q 025672 6 KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGI-PAIGLEGDVRKREDAVRVVESTI 84 (249)
Q Consensus 6 ~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~ 84 (249)
....+++|++|||||++|||++++++|+++|++|++++|+.++++.+.+++...+. ++.++.+|++|+++++++++++.
T Consensus 22 ~~~~~~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~ 101 (286)
T 1xu9_A 22 RPEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAG 101 (286)
T ss_dssp CGGGGTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHH
T ss_pred ChhhcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHH
Confidence 34458899999999999999999999999999999999999999888888866554 68999999999999999999999
Q ss_pred HHhCCccEEEEc-CCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC
Q 025672 85 NHFGKLDILVNA-AAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT 163 (249)
Q Consensus 85 ~~~~~id~vi~~-ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~ 163 (249)
+.++++|+|||| +|... .++.+.+.+++++.+++|+.++++++++++|.|.+. +|+||++||..+..+.
T Consensus 102 ~~~g~iD~li~naag~~~-~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~---------~g~iv~isS~~~~~~~ 171 (286)
T 1xu9_A 102 KLMGGLDMLILNHITNTS-LNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQS---------NGSIVVVSSLAGKVAY 171 (286)
T ss_dssp HHHTSCSEEEECCCCCCC-CCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH---------TCEEEEEEEGGGTSCC
T ss_pred HHcCCCCEEEECCccCCC-CccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHC---------CCEEEEECCcccccCC
Confidence 999999999999 56543 345567899999999999999999999999998764 2889999999999998
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHh--cCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHH
Q 025672 164 WYQIHVSAAKAAVDSITRSLALEW--GTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAAL 241 (249)
Q Consensus 164 ~~~~~y~~sK~a~~~l~~~la~e~--~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~ 241 (249)
++...|++||+++++++++++.|+ . ..||++++|+||+++|++...... . .......+|+|+|+.++
T Consensus 172 ~~~~~Y~asK~a~~~~~~~l~~e~~~~-~~~i~v~~v~Pg~v~t~~~~~~~~---------~-~~~~~~~~~~~vA~~i~ 240 (286)
T 1xu9_A 172 PMVAAYSASKFALDGFFSSIRKEYSVS-RVNVSITLCVLGLIDTETAMKAVS---------G-IVHMQAAPKEECALEII 240 (286)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHHHH-TCCCEEEEEEECCBCCHHHHHHSC---------G-GGGGGCBCHHHHHHHHH
T ss_pred CCccHHHHHHHHHHHHHHHHHHHHhhc-CCCeEEEEeecCccCChhHHHhcc---------c-cccCCCCCHHHHHHHHH
Confidence 999999999999999999999998 5 679999999999999865321111 0 11124578999999999
Q ss_pred HhccC
Q 025672 242 YLASD 246 (249)
Q Consensus 242 ~l~s~ 246 (249)
..+..
T Consensus 241 ~~~~~ 245 (286)
T 1xu9_A 241 KGGAL 245 (286)
T ss_dssp HHHHT
T ss_pred HHHhc
Confidence 87754
|
| >1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-39 Score=264.78 Aligned_cols=218 Identities=22% Similarity=0.208 Sum_probs=177.5
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCe-EEEEeCCcchHHHHHHHHHhc--CCCeeEEEccCCCH-HHHHHHHHHH
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAA-IAIMGRRKTVLRSAVAALHSL--GIPAIGLEGDVRKR-EDAVRVVEST 83 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~-v~l~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~-~~~~~~~~~~ 83 (249)
|++++|+++||||++|||++++++|+++|++ |++++|+.+. +..+++... +.++.++.+|++|+ ++++++++++
T Consensus 1 m~l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~--~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 78 (254)
T 1sby_A 1 MDLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENP--TALAELKAINPKVNITFHTYDVTVPVAESKKLLKKI 78 (254)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCH--HHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHH
T ss_pred CCCCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchH--HHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHH
Confidence 3578999999999999999999999999996 9999998742 222233222 45788999999998 9999999999
Q ss_pred HHHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC
Q 025672 84 INHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT 163 (249)
Q Consensus 84 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~ 163 (249)
.+.++++|+||||||.. +.++|++.+++|+.++++++++++|.|.++... .+|+||++||..+..+.
T Consensus 79 ~~~~g~id~lv~~Ag~~--------~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~~~ 145 (254)
T 1sby_A 79 FDQLKTVDILINGAGIL--------DDHQIERTIAINFTGLVNTTTAILDFWDKRKGG-----PGGIIANICSVTGFNAI 145 (254)
T ss_dssp HHHHSCCCEEEECCCCC--------CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTC-----CCEEEEEECCGGGTSCC
T ss_pred HHhcCCCCEEEECCccC--------CHHHHhhhheeeehhHHHHHHHHHHHHHHhcCC-----CCCEEEEECchhhccCC
Confidence 99999999999999963 456789999999999999999999999765310 13889999999999998
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCC----hHHHHHhhhhhhcccCCCCHHHHHHH
Q 025672 164 WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA----PEEIRSKATDYMAAYKFGEKWDIAMA 239 (249)
Q Consensus 164 ~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~dva~~ 239 (249)
++...|++||+++++|+++++.|+. ++||+||+|+||+++|++...... .+.. .......| ..+|||+|++
T Consensus 146 ~~~~~Y~~sK~a~~~~~~~la~~~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~-~~~~~~~~---~~~~~dvA~~ 220 (254)
T 1sby_A 146 HQVPVYSASKAAVVSFTNSLAKLAP-ITGVTAYSINPGITRTPLVHTFNSWLDVEPRV-AELLLSHP---TQTSEQCGQN 220 (254)
T ss_dssp TTSHHHHHHHHHHHHHHHHHHHHHH-HHSEEEEEEEECSEESHHHHSCCCGGGSCTTH-HHHHTTSC---CEEHHHHHHH
T ss_pred CCchHHHHHHHHHHHHHHHHHHHhc-cCCeEEEEEecCCccCccccccchhhhhhHHH-HHHHhcCC---CCCHHHHHHH
Confidence 8999999999999999999999987 789999999999999876432211 1111 11222223 3489999999
Q ss_pred HHHhcc
Q 025672 240 ALYLAS 245 (249)
Q Consensus 240 v~~l~s 245 (249)
++++++
T Consensus 221 i~~~~~ 226 (254)
T 1sby_A 221 FVKAIE 226 (254)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999985
|
| >1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-39 Score=261.98 Aligned_cols=209 Identities=19% Similarity=0.121 Sum_probs=178.5
Q ss_pred CCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh--
Q 025672 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF-- 87 (249)
Q Consensus 10 l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-- 87 (249)
|++|++|||||++|||++++++|+++|++|++++|+.+..+ ....++.+|++|+++++++++++.+.+
T Consensus 1 m~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~----------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 70 (236)
T 1ooe_A 1 MSSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA----------DSNILVDGNKNWTEQEQSILEQTASSLQG 70 (236)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS----------SEEEECCTTSCHHHHHHHHHHHHHHHHTT
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccc----------cccEEEeCCCCCHHHHHHHHHHHHHHhCC
Confidence 36899999999999999999999999999999999977532 135788999999999999999999999
Q ss_pred CCccEEEEcCCCCCCCCC-CCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccc
Q 025672 88 GKLDILVNAAAGNFLVPA-EDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ 166 (249)
Q Consensus 88 ~~id~vi~~ag~~~~~~~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~ 166 (249)
+++|+||||||.....++ .+.+.++|++.+++|+.++++++++++|.|.+. |+||++||..+..+.++.
T Consensus 71 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~----------g~iv~isS~~~~~~~~~~ 140 (236)
T 1ooe_A 71 SQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPG----------GLLQLTGAAAAMGPTPSM 140 (236)
T ss_dssp CCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE----------EEEEEECCGGGGSCCTTB
T ss_pred CCCCEEEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccC----------CEEEEECchhhccCCCCc
Confidence 799999999998776777 677889999999999999999999999998642 889999999999998999
Q ss_pred hhhHHHHHHHHHHHHHHHHHhc-CCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHH-Hhc
Q 025672 167 IHVSAAKAAVDSITRSLALEWG-TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAAL-YLA 244 (249)
Q Consensus 167 ~~y~~sK~a~~~l~~~la~e~~-~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~-~l~ 244 (249)
..|+++|+++++|+++++.|++ .++||+||+|+||+++|++...... ..+..++.+|+|+|++++ +|+
T Consensus 141 ~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~~----------~~~~~~~~~~~dvA~~i~~~l~ 210 (236)
T 1ooe_A 141 IGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRKWMP----------NADHSSWTPLSFISEHLLKWTT 210 (236)
T ss_dssp HHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHHHHST----------TCCGGGCBCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEEecCcccCcchhhcCC----------CccccccCCHHHHHHHHHHHHc
Confidence 9999999999999999999984 1569999999999999865321111 112345678999999998 555
Q ss_pred cCCC
Q 025672 245 SDAG 248 (249)
Q Consensus 245 s~~a 248 (249)
++++
T Consensus 211 s~~~ 214 (236)
T 1ooe_A 211 ETSS 214 (236)
T ss_dssp CGGG
T ss_pred CCCc
Confidence 7654
|
| >4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-39 Score=278.40 Aligned_cols=227 Identities=15% Similarity=0.057 Sum_probs=189.1
Q ss_pred CCCcEEEEecCCCchhHH--HHHHHHHcCCeEEEEeCCcch------------HHHHHHHHHhcCCCeeEEEccCCCHHH
Q 025672 10 LKGKVALLTGGGSGIGFE--ISLQLGKHGAAIAIMGRRKTV------------LRSAVAALHSLGIPAIGLEGDVRKRED 75 (249)
Q Consensus 10 l~~k~~lItGa~~giG~~--~a~~l~~~G~~v~l~~r~~~~------------~~~~~~~~~~~~~~~~~~~~Dl~~~~~ 75 (249)
..+|++|||||++|||++ +++.|+++|++|++++|+... .+.+.+.+...+.++.++.+|++|+++
T Consensus 58 ~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvtd~~~ 137 (418)
T 4eue_A 58 RGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAFSNET 137 (418)
T ss_dssp CCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTCHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCCCHHH
Confidence 679999999999999999 999999999999999997654 345555566667889999999999999
Q ss_pred HHHHHHHHHHHhCCccEEEEcCCCC-------------CCCCC---------------------CCCCHHHHHHHHhhhh
Q 025672 76 AVRVVESTINHFGKLDILVNAAAGN-------------FLVPA---------------------EDLSPNGFRTVIEIDS 121 (249)
Q Consensus 76 ~~~~~~~~~~~~~~id~vi~~ag~~-------------~~~~~---------------------~~~~~~~~~~~~~~n~ 121 (249)
++++++++.+.+|+||++|||||.. ..+++ .+.+.++|+.++++|.
T Consensus 138 v~~~v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~~~vn~ 217 (418)
T 4eue_A 138 KDKVIKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSASIEEIEETRKVMG 217 (418)
T ss_dssp HHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBCCHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHcCCCCEEEECCcccccccccccccccccccccccccccccccccccccccccccCCCHHHHHHHHHHhh
Confidence 9999999999999999999999974 22333 3568999999999999
Q ss_pred HHHH-HHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccc--hhhHHHHHHHHHHHHHHHHHhcCC-CCeEEEE
Q 025672 122 VGTF-IMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ--IHVSAAKAAVDSITRSLALEWGTD-YAIRVNG 197 (249)
Q Consensus 122 ~~~~-~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~--~~y~~sK~a~~~l~~~la~e~~~~-~gi~v~~ 197 (249)
.+.+ .+++.+.+.+.... +|+||++||..+..+.+.+ ..|++||+|+.+|+++|+.|++ + +|||||+
T Consensus 218 ~~~~~~~~~~l~~~~~~~~--------gg~IV~iSSi~~~~~~p~~~~~aY~ASKaAL~~ltrsLA~ELa-~~~GIrVN~ 288 (418)
T 4eue_A 218 GEDWQEWCEELLYEDCFSD--------KATTIAYSYIGSPRTYKIYREGTIGIAKKDLEDKAKLINEKLN-RVIGGRAFV 288 (418)
T ss_dssp SHHHHHHHHHHHHTTCEEE--------EEEEEEEECCCCGGGTTTTTTSHHHHHHHHHHHHHHHHHHHHH-HHHSCEEEE
T ss_pred HHHHHHHHHHHHHHhhhcC--------CcEEEEEeCchhcCCCCccccHHHHHHHHHHHHHHHHHHHHhC-CccCeEEEE
Confidence 9988 77787776543332 3899999999999888877 9999999999999999999999 8 8999999
Q ss_pred EecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhccCC
Q 025672 198 IAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247 (249)
Q Consensus 198 v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~ 247 (249)
|+||+|+|++.......+.... .-..++++.+++||+++++.||+++.
T Consensus 289 V~PG~v~T~~s~~ip~~p~y~~--~~~~~mk~~G~~E~v~e~~~~L~sd~ 336 (418)
T 4eue_A 289 SVNKALVTKASAYIPTFPLYAA--ILYKVMKEKNIHENCIMQIERMFSEK 336 (418)
T ss_dssp EECCCCCCHHHHTSTTHHHHHH--HHHHHHHHTTCCCCHHHHHHHHHHHT
T ss_pred EECCcCcChhhhcCCCCcHHHH--HHHHHHhhcCChHHHHHHHHHHhhcc
Confidence 9999999876544333222222 22236788999999999999999874
|
| >1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-38 Score=256.00 Aligned_cols=217 Identities=25% Similarity=0.327 Sum_probs=184.6
Q ss_pred CcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCcc
Q 025672 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD 91 (249)
Q Consensus 12 ~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 91 (249)
+|++|||||++|||++++++|+++|++|++++|+.+ . .++.++++|++|+++++++++++ +.++++|
T Consensus 2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~-~-----------~~~~~~~~D~~~~~~~~~~~~~~-~~~~~~d 68 (242)
T 1uay_A 2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-G-----------EDLIYVEGDVTREEDVRRAVARA-QEEAPLF 68 (242)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC-S-----------SSSEEEECCTTCHHHHHHHHHHH-HHHSCEE
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc-c-----------cceEEEeCCCCCHHHHHHHHHHH-HhhCCce
Confidence 689999999999999999999999999999999875 1 24689999999999999999999 8889999
Q ss_pred EEEEcCCCCCCCCCCCCCH----HHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch
Q 025672 92 ILVNAAAGNFLVPAEDLSP----NGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 167 (249)
Q Consensus 92 ~vi~~ag~~~~~~~~~~~~----~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~ 167 (249)
++|||||.....++.+.+. ++|++.+++|+.+++++++++.+.|.++.... ....++||++||..+..+.++..
T Consensus 69 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~--~~~~~~iv~~sS~~~~~~~~~~~ 146 (242)
T 1uay_A 69 AVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDA--EGQRGVIVNTASVAAFEGQIGQA 146 (242)
T ss_dssp EEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCT--TSCSEEEEEECCTHHHHCCTTCH
T ss_pred EEEEcccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCC--CCCCeEEEEeCChhhccCCCCCc
Confidence 9999999876655555444 49999999999999999999999997653110 00125999999999998888899
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcc-cCCCCHHHHHHHHHHhccC
Q 025672 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAA-YKFGEKWDIAMAALYLASD 246 (249)
Q Consensus 168 ~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~v~~l~s~ 246 (249)
.|+++|++++.++++++.|++ ++||++++|+||+++|++... .. +...+.+....|. +++.+|+|+|++++||+++
T Consensus 147 ~Y~~sK~a~~~~~~~l~~e~~-~~gi~v~~v~Pg~v~t~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~ 223 (242)
T 1uay_A 147 AYAASKGGVVALTLPAARELA-GWGIRVVTVAPGLFDTPLLQG-LP-EKAKASLAAQVPFPPRLGRPEEYAALVLHILEN 223 (242)
T ss_dssp HHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSCSSHHHHT-SC-HHHHHHHHTTCCSSCSCCCHHHHHHHHHHHHHC
T ss_pred hhhHHHHHHHHHHHHHHHHHh-hcCcEEEEEEeccCcchhhhc-cc-hhHHHHHHhhCCCcccCCCHHHHHHHHHHHhcC
Confidence 999999999999999999998 889999999999999876433 22 3344455566777 8999999999999999986
|
| >1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-38 Score=259.80 Aligned_cols=224 Identities=18% Similarity=0.131 Sum_probs=185.6
Q ss_pred CCCCCCCCcEEEEecCCCchhHHHHHHHHHcC---CeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHH
Q 025672 5 FKGDILKGKVALLTGGGSGIGFEISLQLGKHG---AAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVE 81 (249)
Q Consensus 5 ~~~~~l~~k~~lItGa~~giG~~~a~~l~~~G---~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~ 81 (249)
....++++|++|||||++|||++++++|+++| ++|++++|+.+..+.+ +++...+.++.++.+|++|+++++++++
T Consensus 14 ~~~~~~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~-~~l~~~~~~~~~~~~Dl~~~~~v~~~~~ 92 (267)
T 1sny_A 14 LVPRGSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKEL-EDLAKNHSNIHILEIDLRNFDAYDKLVA 92 (267)
T ss_dssp ------CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHH-HHHHHHCTTEEEEECCTTCGGGHHHHHH
T ss_pred ccccCCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHH-HHhhccCCceEEEEecCCChHHHHHHHH
Confidence 44556889999999999999999999999999 9999999998876654 3444446689999999999999999999
Q ss_pred HHHHHhC--CccEEEEcCCCCC-CCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCC---CCCCCCCceEEEec
Q 025672 82 STINHFG--KLDILVNAAAGNF-LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRG---QASSSSGGIIINIS 155 (249)
Q Consensus 82 ~~~~~~~--~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~---~~~~~~~g~iv~is 155 (249)
++.+.++ ++|+||||||... ..++.+.+.++++..+++|+.+++++++++++.|.++... .......++||++|
T Consensus 93 ~~~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~is 172 (267)
T 1sny_A 93 DIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMS 172 (267)
T ss_dssp HHHHHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEEC
T ss_pred HHHHhcCCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEEEe
Confidence 9999998 8999999999876 6677888999999999999999999999999999765100 00001138899999
Q ss_pred cccccccCc---cchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCC
Q 025672 156 ATLHYTATW---YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGE 232 (249)
Q Consensus 156 s~~~~~~~~---~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (249)
|..+..+.+ +...|+++|++++.|++.++.|++ ++||++++|+||+|+|++... .+..+
T Consensus 173 S~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~-----------------~~~~~ 234 (267)
T 1sny_A 173 SILGSIQGNTDGGMYAYRTSKSALNAATKSLSVDLY-PQRIMCVSLHPGWVKTDMGGS-----------------SAPLD 234 (267)
T ss_dssp CGGGCSTTCCSCCCHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEECCCSBCSTTTCT-----------------TCSBC
T ss_pred cccccccCCCCCCchHHHHHHHHHHHHHHHHHHHhh-cCCcEEEEeCCcceecCCCCC-----------------CCCCC
Confidence 998877653 677899999999999999999998 889999999999999875421 14578
Q ss_pred HHHHHHHHHHhccCC
Q 025672 233 KWDIAMAALYLASDA 247 (249)
Q Consensus 233 ~~dva~~v~~l~s~~ 247 (249)
|+++|+.+++++++.
T Consensus 235 ~~~~a~~~~~~~~~~ 249 (267)
T 1sny_A 235 VPTSTGQIVQTISKL 249 (267)
T ss_dssp HHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHhc
Confidence 999999999998754
|
| >1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-38 Score=260.43 Aligned_cols=208 Identities=24% Similarity=0.293 Sum_probs=181.0
Q ss_pred CCCcEEEEecCCCchhHHHHHHHHH-cCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhC
Q 025672 10 LKGKVALLTGGGSGIGFEISLQLGK-HGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (249)
Q Consensus 10 l~~k~~lItGa~~giG~~~a~~l~~-~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 88 (249)
.++|++|||||++|||++++++|++ +|++|++++|+.+.+++..+++...+.++.++.+|++|.++++++++++.+.++
T Consensus 2 ~~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 81 (276)
T 1wma_A 2 SGIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYG 81 (276)
T ss_dssp CCCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhcC
Confidence 3689999999999999999999999 999999999999888888888877777899999999999999999999999999
Q ss_pred CccEEEEcCCCCCCCCCCCCC-HHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC----
Q 025672 89 KLDILVNAAAGNFLVPAEDLS-PNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT---- 163 (249)
Q Consensus 89 ~id~vi~~ag~~~~~~~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~---- 163 (249)
++|+||||||....... ..+ .++++..+++|+.+++++++++++.|.+. |+||++||..+..+.
T Consensus 82 ~id~li~~Ag~~~~~~~-~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~----------g~iv~~sS~~~~~~~~~~~ 150 (276)
T 1wma_A 82 GLDVLVNNAGIAFKVAD-PTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQ----------GRVVNVSSIMSVRALKSCS 150 (276)
T ss_dssp SEEEEEECCCCCCCTTC-CSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEE----------EEEEEECCHHHHHHHHTSC
T ss_pred CCCEEEECCcccccCCC-ccccHHHHHhhhheeeeeHHHHHHHHHHhhCCC----------CEEEEECChhhhcccccCC
Confidence 99999999997654332 334 58899999999999999999999987642 789999998766320
Q ss_pred -------------------------------------ccchhhHHHHHHHHHHHHHHHHHhcCC----CCeEEEEEecCc
Q 025672 164 -------------------------------------WYQIHVSAAKAAVDSITRSLALEWGTD----YAIRVNGIAPGP 202 (249)
Q Consensus 164 -------------------------------------~~~~~y~~sK~a~~~l~~~la~e~~~~----~gi~v~~v~pG~ 202 (249)
.+...|++||++++.|++.+++|++ + .||+|++|+||+
T Consensus 151 ~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~-~~~~~~~i~v~~v~PG~ 229 (276)
T 1wma_A 151 PELQQKFRSETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLS-EQRKGDKILLNACCPGW 229 (276)
T ss_dssp HHHHHHHHCSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHH-HHCTTSCCEEEEEECCS
T ss_pred hhHHhhccccccchhhhhhhhhhhhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHhh-cccCCCceEEEEecCCc
Confidence 1237899999999999999999997 6 799999999999
Q ss_pred cccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhccC
Q 025672 203 IKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246 (249)
Q Consensus 203 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~ 246 (249)
+.|++... .++.+|+|+|++++||+++
T Consensus 230 v~t~~~~~-----------------~~~~~~~~~a~~~~~l~~~ 256 (276)
T 1wma_A 230 VRTDMAGP-----------------KATKSPEEGAETPVYLALL 256 (276)
T ss_dssp BCSTTTCT-----------------TCSBCHHHHTHHHHHHHSC
T ss_pred cccCcCCc-----------------cccCChhHhhhhHhhhhcC
Confidence 99875432 2478999999999999974
|
| >1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-38 Score=258.52 Aligned_cols=203 Identities=20% Similarity=0.228 Sum_probs=159.7
Q ss_pred cEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCccE
Q 025672 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI 92 (249)
Q Consensus 13 k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ 92 (249)
|++|||||++|||++++++|+++|++|++++|+.++++. .+++|++|.++++++++++ ++++|+
T Consensus 2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~-------------~~~~Dl~~~~~v~~~~~~~---~~~id~ 65 (257)
T 1fjh_A 2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA-------------DLSTAEGRKQAIADVLAKC---SKGMDG 65 (257)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC-------------CTTSHHHHHHHHHHHHTTC---TTCCSE
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhcc-------------ccccCCCCHHHHHHHHHHh---CCCCCE
Confidence 689999999999999999999999999999998765321 1678999999999888743 389999
Q ss_pred EEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccc------------
Q 025672 93 LVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY------------ 160 (249)
Q Consensus 93 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~------------ 160 (249)
||||||.... .+.|+..+++|+.++++++++++|.|.+++. |+||++||..+.
T Consensus 66 lv~~Ag~~~~-------~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~--------g~iv~isS~~~~~~~~~~~~~~~~ 130 (257)
T 1fjh_A 66 LVLCAGLGPQ-------TKVLGNVVSVNYFGATELMDAFLPALKKGHQ--------PAAVVISSVASAHLAFDKNPLALA 130 (257)
T ss_dssp EEECCCCCTT-------CSSHHHHHHHHTHHHHHHHHHHHHHHHTSSS--------CEEEEECCGGGGSSCGGGCTTHHH
T ss_pred EEECCCCCCC-------cccHHHHHHHhhHHHHHHHHHHHHHHhhcCC--------cEEEEECChhhhccccccchhhhh
Confidence 9999997541 1238999999999999999999999987643 899999999887
Q ss_pred ----------------ccCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhh-
Q 025672 161 ----------------TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATD- 223 (249)
Q Consensus 161 ----------------~~~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~- 223 (249)
.+.++...|++||++++.+++.++.|++ ++||+||+|+||+++|++....... ........
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~PG~v~t~~~~~~~~~-~~~~~~~~~ 208 (257)
T 1fjh_A 131 LEAGEEAKARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWG-EAGVRLNTIAPGATETPLLQAGLQD-PRYGESIAK 208 (257)
T ss_dssp HHHTCHHHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHH-HTTCEEEEEEECC----------------------
T ss_pred hcccchhhhhhhhhcccCCCCccHHHHHHHHHHHHHHHHHHHHh-hcCeEEEEEeeCCCCCccchhhccc-hhHHHHHHh
Confidence 4445778999999999999999999998 8899999999999998765432111 11112222
Q ss_pred -hhcccCCCCHHHHHHHHHHhccCCC
Q 025672 224 -YMAAYKFGEKWDIAMAALYLASDAG 248 (249)
Q Consensus 224 -~~~~~~~~~~~dva~~v~~l~s~~a 248 (249)
..|.+++.+|+|+|++++||+++++
T Consensus 209 ~~~~~~~~~~~~dvA~~~~~l~~~~~ 234 (257)
T 1fjh_A 209 FVPPMGRRAEPSEMASVIAFLMSPAA 234 (257)
T ss_dssp CCCSTTSCCCTHHHHHHHHHHTSGGG
T ss_pred cccccCCCCCHHHHHHHHHHHhCchh
Confidence 4577889999999999999998864
|
| >2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-35 Score=234.79 Aligned_cols=200 Identities=16% Similarity=0.098 Sum_probs=171.3
Q ss_pred cEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCccE
Q 025672 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI 92 (249)
Q Consensus 13 k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ 92 (249)
|++|||||++|||++++++|+++ +|++++|+.++++.+.+++.. .++.+|++|++++++++++ ++++|+
T Consensus 1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~~~-----~~~~~D~~~~~~~~~~~~~----~~~id~ 69 (207)
T 2yut_A 1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREVGA-----RALPADLADELEAKALLEE----AGPLDL 69 (207)
T ss_dssp CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHHTC-----EECCCCTTSHHHHHHHHHH----HCSEEE
T ss_pred CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhccC-----cEEEeeCCCHHHHHHHHHh----cCCCCE
Confidence 58999999999999999999999 999999998888777766632 8899999999999999886 689999
Q ss_pred EEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhhHHH
Q 025672 93 LVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAA 172 (249)
Q Consensus 93 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~~s 172 (249)
||||||.....++.+.+.++|++.+++|+.+++++++++ .+++ .++||++||..+..+.++...|+++
T Consensus 70 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~--------~~~iv~~sS~~~~~~~~~~~~Y~~s 137 (207)
T 2yut_A 70 LVHAVGKAGRASVREAGRDLVEEMLAAHLLTAAFVLKHA----RFQK--------GARAVFFGAYPRYVQVPGFAAYAAA 137 (207)
T ss_dssp EEECCCCCCCBCSCC---CHHHHHHHHHHHHHHHHHHHC----CEEE--------EEEEEEECCCHHHHSSTTBHHHHHH
T ss_pred EEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHH----HhcC--------CcEEEEEcChhhccCCCCcchHHHH
Confidence 999999887778888899999999999999999999988 2222 3889999999998888889999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhccCCC
Q 025672 173 KAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAG 248 (249)
Q Consensus 173 K~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~a 248 (249)
|++++.+++.++.|++ ++||++++|+||++.|++... ...+.+++.+++|+|+++++++++..
T Consensus 138 K~a~~~~~~~~~~~~~-~~gi~v~~v~pg~v~t~~~~~------------~~~~~~~~~~~~dva~~~~~~~~~~~ 200 (207)
T 2yut_A 138 KGALEAYLEAARKELL-REGVHLVLVRLPAVATGLWAP------------LGGPPKGALSPEEAARKVLEGLFREP 200 (207)
T ss_dssp HHHHHHHHHHHHHHHH-TTTCEEEEECCCCBCSGGGGG------------GTSCCTTCBCHHHHHHHHHHHHC--C
T ss_pred HHHHHHHHHHHHHHHh-hhCCEEEEEecCcccCCCccc------------cCCCCCCCCCHHHHHHHHHHHHhCCC
Confidence 9999999999999998 889999999999999765211 12345788999999999999997653
|
| >2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.4e-36 Score=288.82 Aligned_cols=224 Identities=17% Similarity=0.188 Sum_probs=184.5
Q ss_pred CCCCCCcEEEEecCCCc-hhHHHHHHHHHcCCeEEEE-eCCcchHHHHHHHHH----hcCCCeeEEEccCCCHHHHHHHH
Q 025672 7 GDILKGKVALLTGGGSG-IGFEISLQLGKHGAAIAIM-GRRKTVLRSAVAALH----SLGIPAIGLEGDVRKREDAVRVV 80 (249)
Q Consensus 7 ~~~l~~k~~lItGa~~g-iG~~~a~~l~~~G~~v~l~-~r~~~~~~~~~~~~~----~~~~~~~~~~~Dl~~~~~~~~~~ 80 (249)
.+.+++|++|||||++| ||+++|++|+++|++|+++ +|+.+.+++..+++. ..+.++.++.||++|++++++++
T Consensus 670 ~m~l~gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~alv 749 (1887)
T 2uv8_A 670 GVTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALI 749 (1887)
T ss_dssp CBCCTTCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHH
T ss_pred cCCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHHH
Confidence 34688999999999998 9999999999999999998 577777776666652 23667899999999999999999
Q ss_pred HHHHHH-----hC-CccEEEEcCCCCCCC-CCCCCC--HHHHHHHHhhhhHHHHHHHHHH--HHHHHhcCCCCCCCCCCc
Q 025672 81 ESTINH-----FG-KLDILVNAAAGNFLV-PAEDLS--PNGFRTVIEIDSVGTFIMCHEA--LKYLKKGGRGQASSSSGG 149 (249)
Q Consensus 81 ~~~~~~-----~~-~id~vi~~ag~~~~~-~~~~~~--~~~~~~~~~~n~~~~~~l~~~~--~~~~~~~~~~~~~~~~~g 149 (249)
+++.+. +| ++|+||||||+.... ++.+.+ .++|+.++++|+.+++.+++++ +|.|.+++ +|
T Consensus 750 ~~i~~~~~~~G~G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~--------~G 821 (1887)
T 2uv8_A 750 EFIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRP--------AQ 821 (1887)
T ss_dssp HHHHSCTTTTSCCCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCC--------EE
T ss_pred HHHHHhccccccCCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCC--------CC
Confidence 999988 66 999999999988766 788888 8999999999999999999988 56665543 38
Q ss_pred eEEEeccccccccCccchhhHHHHHHHHHH-HHHHHHHhcCCCCeEEEEEecCccc-cccccCCCChHHHHHhhhhhhcc
Q 025672 150 IIINISATLHYTATWYQIHVSAAKAAVDSI-TRSLALEWGTDYAIRVNGIAPGPIK-DTAGVSKLAPEEIRSKATDYMAA 227 (249)
Q Consensus 150 ~iv~iss~~~~~~~~~~~~y~~sK~a~~~l-~~~la~e~~~~~gi~v~~v~pG~v~-t~~~~~~~~~~~~~~~~~~~~~~ 227 (249)
+||++||..+..+ +...|++||+|+.+| ++.++.+++ ++ |+||+|+||+|+ |+++..... ........++
T Consensus 822 ~IVnISS~ag~~g--g~~aYaASKAAL~~Lttr~lA~ela-~~-IrVNaV~PG~V~tT~m~~~~~~----~~~~~~~~pl 893 (1887)
T 2uv8_A 822 VILPMSPNHGTFG--GDGMYSESKLSLETLFNRWHSESWA-NQ-LTVCGAIIGWTRGTGLMSANNI----IAEGIEKMGV 893 (1887)
T ss_dssp EEEEECSCTTCSS--CBTTHHHHHHHGGGHHHHHHHSSCT-TT-EEEEEEEECCEECC-----CCT----THHHHHTTSC
T ss_pred EEEEEcChHhccC--CCchHHHHHHHHHHHHHHHHHHHhC-CC-eEEEEEEecccccccccccchh----HHHHHHhcCC
Confidence 9999999988877 678899999999999 999999997 66 999999999999 554332111 1112233444
Q ss_pred cCCCCHHHHHHHHHHhccCC
Q 025672 228 YKFGEKWDIAMAALYLASDA 247 (249)
Q Consensus 228 ~~~~~~~dva~~v~~l~s~~ 247 (249)
|..+|+|+|.+++||++++
T Consensus 894 -r~~sPEEVA~avlfLaSd~ 912 (1887)
T 2uv8_A 894 -RTFSQKEMAFNLLGLLTPE 912 (1887)
T ss_dssp -CCEEHHHHHHHHHGGGSHH
T ss_pred -CCCCHHHHHHHHHHHhCCC
Confidence 6679999999999999975
|
| >2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-36 Score=285.18 Aligned_cols=225 Identities=17% Similarity=0.188 Sum_probs=186.8
Q ss_pred CCCCCCCcEEEEecCCCc-hhHHHHHHHHHcCCeEEEE-eCCcchHHHHHHHHHh----cCCCeeEEEccCCCHHHHHHH
Q 025672 6 KGDILKGKVALLTGGGSG-IGFEISLQLGKHGAAIAIM-GRRKTVLRSAVAALHS----LGIPAIGLEGDVRKREDAVRV 79 (249)
Q Consensus 6 ~~~~l~~k~~lItGa~~g-iG~~~a~~l~~~G~~v~l~-~r~~~~~~~~~~~~~~----~~~~~~~~~~Dl~~~~~~~~~ 79 (249)
..+.+++|++|||||++| ||+++|++|+++|++|+++ +|+.+.+++..+++.. .+.++.++.||++|+++++++
T Consensus 470 ~~msL~GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVeaL 549 (1688)
T 2pff_A 470 XXVTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEAL 549 (1688)
T ss_dssp SCCCCCSCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHHHH
T ss_pred cccccCCCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHHH
Confidence 445688999999999998 9999999999999999998 6777777766666632 256789999999999999999
Q ss_pred HHHHHHH-----hC-CccEEEEcCCCCCCC-CCCCCC--HHHHHHHHhhhhHHHHHHHHHH--HHHHHhcCCCCCCCCCC
Q 025672 80 VESTINH-----FG-KLDILVNAAAGNFLV-PAEDLS--PNGFRTVIEIDSVGTFIMCHEA--LKYLKKGGRGQASSSSG 148 (249)
Q Consensus 80 ~~~~~~~-----~~-~id~vi~~ag~~~~~-~~~~~~--~~~~~~~~~~n~~~~~~l~~~~--~~~~~~~~~~~~~~~~~ 148 (249)
++++.+. +| ++|+||||||+.... ++.+.+ .++|++.+++|+.+++.+++++ +|.|.+++ +
T Consensus 550 Ve~I~e~~~~~GfG~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krg--------g 621 (1688)
T 2pff_A 550 IEFIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRP--------A 621 (1688)
T ss_dssp HHHHHSCTTSSSCCCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSC--------E
T ss_pred HHHHHHhccccccCCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCC--------C
Confidence 9999988 77 999999999987766 788888 8999999999999999999998 67776543 3
Q ss_pred ceEEEeccccccccCccchhhHHHHHHHHHH-HHHHHHHhcCCCCeEEEEEecCccc-cccccCCCChHHHHHhhhhhhc
Q 025672 149 GIIINISATLHYTATWYQIHVSAAKAAVDSI-TRSLALEWGTDYAIRVNGIAPGPIK-DTAGVSKLAPEEIRSKATDYMA 226 (249)
Q Consensus 149 g~iv~iss~~~~~~~~~~~~y~~sK~a~~~l-~~~la~e~~~~~gi~v~~v~pG~v~-t~~~~~~~~~~~~~~~~~~~~~ 226 (249)
|+||++||..+..+ +...|++||+|+.+| ++.++.+++ ++ |+||+|+||+|+ |++.... +.........+
T Consensus 622 GrIVnISSiAG~~G--g~saYaASKAAL~aLttrsLAeEla-~~-IRVNaVaPG~V~TT~M~~~~----e~~~~~l~~ip 693 (1688)
T 2pff_A 622 QVILPMSPNHGTFG--GDGMYSESKLSLETLFNRWHSESWA-NQ-LTVCGAIIGWTRGTGLMSAN----NIIAEGIEKMG 693 (1688)
T ss_dssp EECCCCCSCTTTSS--CBTTHHHHHHHHTHHHHHTTTSSCT-TT-EECCCCCCCCCCCCSSSCTT----TTCSTTTSSSS
T ss_pred CEEEEEEChHhccC--CchHHHHHHHHHHHHHHHHHHHHcC-CC-eEEEEEEECcCcCCcccCCc----hHHHHHHHhCC
Confidence 89999999988876 578899999999999 788888887 65 999999999999 4543221 11111223334
Q ss_pred ccCCCCHHHHHHHHHHhccCC
Q 025672 227 AYKFGEKWDIAMAALYLASDA 247 (249)
Q Consensus 227 ~~~~~~~~dva~~v~~l~s~~ 247 (249)
. |..+|+|+|++++||+|++
T Consensus 694 l-R~~sPEEVA~aIlFLaSd~ 713 (1688)
T 2pff_A 694 V-RTFSQKEMAFNLLGLLTPE 713 (1688)
T ss_dssp C-CCCCCCTTHHHHHHHTSTT
T ss_pred C-CCCCHHHHHHHHHHHhCCC
Confidence 4 5679999999999999986
|
| >3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.2e-35 Score=259.05 Aligned_cols=219 Identities=15% Similarity=0.108 Sum_probs=182.9
Q ss_pred CCCcEEEEecCCCchhHHHHHHHHHcCCe-EEEE-eCC-------------cchHHHHHHHHHhcCCCeeEEEccCCCHH
Q 025672 10 LKGKVALLTGGGSGIGFEISLQLGKHGAA-IAIM-GRR-------------KTVLRSAVAALHSLGIPAIGLEGDVRKRE 74 (249)
Q Consensus 10 l~~k~~lItGa~~giG~~~a~~l~~~G~~-v~l~-~r~-------------~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~ 74 (249)
-+++++|||||++|||.+++++|+++|++ |+++ +|+ .+.++++.+++...+.++.++.||++|++
T Consensus 249 ~~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~ 328 (525)
T 3qp9_A 249 QADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLTDAE 328 (525)
T ss_dssp CTTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTTSHH
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCCCHH
Confidence 36899999999999999999999999997 7777 898 35567888888888889999999999999
Q ss_pred HHHHHHHHHHHHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEe
Q 025672 75 DAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINI 154 (249)
Q Consensus 75 ~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~i 154 (249)
+++++++++. .+++||+||||||+....++.+.+.+++++++++|+.|++++.+++.+.+.+++. .++||++
T Consensus 329 ~v~~~~~~i~-~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~-------~~~iV~~ 400 (525)
T 3qp9_A 329 AAARLLAGVS-DAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGR-------PPVLVLF 400 (525)
T ss_dssp HHHHHHHTSC-TTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----C-------CCEEEEE
T ss_pred HHHHHHHHHH-hcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCC-------CCEEEEE
Confidence 9999999988 7899999999999988888999999999999999999999999999999866531 2789999
Q ss_pred ccccccccCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHH
Q 025672 155 SATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKW 234 (249)
Q Consensus 155 ss~~~~~~~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (249)
||..+..+.+++..|+++|+++++|+ .+++ ..||++++|+||+++|++.... .....+.. ...+..+|+
T Consensus 401 SS~a~~~g~~g~~~YaaaKa~l~~lA----~~~~-~~gi~v~sI~pG~~~tgm~~~~----~~~~~~~~--~g~~~l~pe 469 (525)
T 3qp9_A 401 SSVAAIWGGAGQGAYAAGTAFLDALA----GQHR-ADGPTVTSVAWSPWEGSRVTEG----ATGERLRR--LGLRPLAPA 469 (525)
T ss_dssp EEGGGTTCCTTCHHHHHHHHHHHHHH----TSCC-SSCCEEEEEEECCBTTSGGGSS----HHHHHHHH--TTBCCBCHH
T ss_pred CCHHHcCCCCCCHHHHHHHHHHHHHH----HHHH-hCCCCEEEEECCccccccccch----hhHHHHHh--cCCCCCCHH
Confidence 99999999999999999999998874 5666 7899999999999987655322 11111211 122467999
Q ss_pred HHHHHHHHhccCC
Q 025672 235 DIAMAALYLASDA 247 (249)
Q Consensus 235 dva~~v~~l~s~~ 247 (249)
|+++++.++++..
T Consensus 470 e~a~~l~~~l~~~ 482 (525)
T 3qp9_A 470 TALTALDTALGHG 482 (525)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhCC
Confidence 9999999998653
|
| >2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-35 Score=281.75 Aligned_cols=225 Identities=18% Similarity=0.208 Sum_probs=184.5
Q ss_pred CCCCCCcEEEEecCCCc-hhHHHHHHHHHcCCeEEEEe-CCcchHHHHHHHH----HhcCCCeeEEEccCCCHHHHHHHH
Q 025672 7 GDILKGKVALLTGGGSG-IGFEISLQLGKHGAAIAIMG-RRKTVLRSAVAAL----HSLGIPAIGLEGDVRKREDAVRVV 80 (249)
Q Consensus 7 ~~~l~~k~~lItGa~~g-iG~~~a~~l~~~G~~v~l~~-r~~~~~~~~~~~~----~~~~~~~~~~~~Dl~~~~~~~~~~ 80 (249)
.+++++|++|||||++| ||+++|++|+++|++|++++ |+.+.+++..+++ ...+.++.++.||++|++++++++
T Consensus 647 ~m~L~gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~alv 726 (1878)
T 2uv9_A 647 GLTFQGKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEALV 726 (1878)
T ss_dssp CBCCTTCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHH
T ss_pred CCCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHH
Confidence 34688999999999999 99999999999999999985 6566665555444 233678999999999999999999
Q ss_pred HHHHHH---hC-CccEEEEcCCCCCCC-CCCCCC--HHHHHHHHhhhhHHHHHHHHH--HHHHHHhcCCCCCCCCCCceE
Q 025672 81 ESTINH---FG-KLDILVNAAAGNFLV-PAEDLS--PNGFRTVIEIDSVGTFIMCHE--ALKYLKKGGRGQASSSSGGII 151 (249)
Q Consensus 81 ~~~~~~---~~-~id~vi~~ag~~~~~-~~~~~~--~~~~~~~~~~n~~~~~~l~~~--~~~~~~~~~~~~~~~~~~g~i 151 (249)
+++.+. +| +||+||||||+.... ++.+.+ .++|+.++++|+.+++.+++. +++.|.+++ +|+|
T Consensus 727 ~~i~~~~~~~G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~--------~G~I 798 (1878)
T 2uv9_A 727 NYIYDTKNGLGWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRP--------AQVI 798 (1878)
T ss_dssp HHHHCSSSSCCCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCC--------EEEC
T ss_pred HHHHHhhcccCCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCC--------CCEE
Confidence 999988 88 999999999988776 888888 899999999999999999987 667665543 3899
Q ss_pred EEeccccccccCccchhhHHHHHHHHHHHHHHHHH-hcCCCCeEEEEEecCccc-cccccCCCChHHHHHhhhhhhcccC
Q 025672 152 INISATLHYTATWYQIHVSAAKAAVDSITRSLALE-WGTDYAIRVNGIAPGPIK-DTAGVSKLAPEEIRSKATDYMAAYK 229 (249)
Q Consensus 152 v~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~e-~~~~~gi~v~~v~pG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~ 229 (249)
|++||..+..+ +...|++||+|+.+|++.++.+ ++ ++ |+||+|+||+++ |++... .+.........++ |
T Consensus 799 VnISS~ag~~g--g~~aYaASKAAL~aLt~~laAeEla-~~-IrVNaVaPG~V~gT~m~~~----~~~~~~~~~~~pl-r 869 (1878)
T 2uv9_A 799 LPLSPNHGTFG--NDGLYSESKLALETLFNRWYSESWG-NY-LTICGAVIGWTRGTGLMSA----NNLVAEGVEKLGV-R 869 (1878)
T ss_dssp CEECSCSSSSS--CCSSHHHHHHHHTTHHHHHHHSTTT-TT-EEEEEEEECCBCCTTSCSH----HHHTHHHHHTTTC-C
T ss_pred EEEcchhhccC--CchHHHHHHHHHHHHHHHHHHHHcC-CC-eEEEEEEecceecCccccc----chhhHHHHHhcCC-C
Confidence 99999988877 4678999999999999877654 76 65 999999999999 775432 1222223333444 5
Q ss_pred CCCHHHHHHHHHHhccCCC
Q 025672 230 FGEKWDIAMAALYLASDAG 248 (249)
Q Consensus 230 ~~~~~dva~~v~~l~s~~a 248 (249)
..+|+|+|.+++||+++++
T Consensus 870 ~~sPeEVA~avlfLaSd~a 888 (1878)
T 2uv9_A 870 TFSQQEMAFNLLGLMAPAI 888 (1878)
T ss_dssp CBCHHHHHHHHHHHHSHHH
T ss_pred CCCHHHHHHHHHHHhCCcc
Confidence 6699999999999998753
|
| >3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-34 Score=226.16 Aligned_cols=188 Identities=18% Similarity=0.243 Sum_probs=165.4
Q ss_pred EEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCccEE
Q 025672 14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDIL 93 (249)
Q Consensus 14 ~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~v 93 (249)
+++||||+||||++++++|+ +|++|++++|+.+ ++.+|++|+++++++++++ +++|+|
T Consensus 5 ~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~-----------------~~~~D~~~~~~~~~~~~~~----~~~d~v 62 (202)
T 3d7l_A 5 KILLIGASGTLGSAVKERLE-KKAEVITAGRHSG-----------------DVTVDITNIDSIKKMYEQV----GKVDAI 62 (202)
T ss_dssp EEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS-----------------SEECCTTCHHHHHHHHHHH----CCEEEE
T ss_pred EEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc-----------------ceeeecCCHHHHHHHHHHh----CCCCEE
Confidence 79999999999999999999 9999999999864 4789999999999998764 789999
Q ss_pred EEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhhHHHH
Q 025672 94 VNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAK 173 (249)
Q Consensus 94 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~~sK 173 (249)
|||||.....++.+.+.++|++.+++|+.+++++++++.+.|.+. ++||++||..+..+.++...|+++|
T Consensus 63 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~----------~~iv~~sS~~~~~~~~~~~~Y~~sK 132 (202)
T 3d7l_A 63 VSATGSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDK----------GSFTLTTGIMMEDPIVQGASAAMAN 132 (202)
T ss_dssp EECCCCCCCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEE----------EEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred EECCCCCCCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccC----------CEEEEEcchhhcCCCCccHHHHHHH
Confidence 999998777777888999999999999999999999999987542 7899999999988888899999999
Q ss_pred HHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhccC
Q 025672 174 AAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246 (249)
Q Consensus 174 ~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~ 246 (249)
++++.+++.++.|+ ++||+++.|+||+++|++.. ..+..+..++.+++|+|+++++++++
T Consensus 133 ~~~~~~~~~~~~e~--~~gi~v~~v~pg~v~~~~~~-----------~~~~~~~~~~~~~~dva~~~~~~~~~ 192 (202)
T 3d7l_A 133 GAVTAFAKSAAIEM--PRGIRINTVSPNVLEESWDK-----------LEPFFEGFLPVPAAKVARAFEKSVFG 192 (202)
T ss_dssp HHHHHHHHHHTTSC--STTCEEEEEEECCBGGGHHH-----------HGGGSTTCCCBCHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHc--cCCeEEEEEecCccCCchhh-----------hhhhccccCCCCHHHHHHHHHHhhhc
Confidence 99999999999987 46999999999999976421 12234556788999999999988743
|
| >2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-33 Score=228.72 Aligned_cols=202 Identities=19% Similarity=0.254 Sum_probs=163.5
Q ss_pred cEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCccE
Q 025672 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI 92 (249)
Q Consensus 13 k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ 92 (249)
|++|||||+||||++++++|+++|++|++++|+.++++. .+.+|++|+++++++++++ .+++|+
T Consensus 2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-------------~~~~D~~~~~~~~~~~~~~---~~~~d~ 65 (255)
T 2dkn_A 2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEA-------------DLSTPGGRETAVAAVLDRC---GGVLDG 65 (255)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC-------------CTTSHHHHHHHHHHHHHHH---TTCCSE
T ss_pred cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHccc-------------cccCCcccHHHHHHHHHHc---CCCccE
Confidence 589999999999999999999999999999998764321 1678999999999988754 378999
Q ss_pred EEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC---------
Q 025672 93 LVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT--------- 163 (249)
Q Consensus 93 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~--------- 163 (249)
||||||.... .+.++..+++|+.+++++++++.+.|.+.+. ++||++||..+..+.
T Consensus 66 vi~~Ag~~~~-------~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~--------~~iv~~sS~~~~~~~~~~~~~~~~ 130 (255)
T 2dkn_A 66 LVCCAGVGVT-------AANSGLVVAVNYFGVSALLDGLAEALSRGQQ--------PAAVIVGSIAATQPGAAELPMVEA 130 (255)
T ss_dssp EEECCCCCTT-------SSCHHHHHHHHTHHHHHHHHHHHHHHHTSSS--------CEEEEECCGGGGSTTGGGCHHHHH
T ss_pred EEECCCCCCc-------chhHHHHHHHHhHHHHHHHHHHHHHhhhcCC--------ceEEEEeccccccccccccchhhh
Confidence 9999997541 2347899999999999999999999987643 889999999887654
Q ss_pred -----------------ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhh-
Q 025672 164 -----------------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYM- 225 (249)
Q Consensus 164 -----------------~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~- 225 (249)
++...|+.+|++++.+++.++++++ ++||++++|+||++.|+....... ...........
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~-~~gi~v~~v~pg~v~~~~~~~~~~-~~~~~~~~~~~~ 208 (255)
T 2dkn_A 131 MLAGDEARAIELAEQQGQTHLAYAGSKYAVTCLARRNVVDWA-GRGVRLNVVAPGAVETPLLQASKA-DPRYGESTRRFV 208 (255)
T ss_dssp HHHTCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHTHHHHH-HTTCEEEEEEECCBCSHHHHHHHH-CTTTHHHHHSCC
T ss_pred hcccchhhhhhhccccCCcchhHHHHHHHHHHHHHHHHHHHh-hcCcEEEEEcCCcccchhhhhccc-chhhHHHHHHHH
Confidence 4677899999999999999999997 789999999999999765322100 00011111122
Q ss_pred -cccCCCCHHHHHHHHHHhccCC
Q 025672 226 -AAYKFGEKWDIAMAALYLASDA 247 (249)
Q Consensus 226 -~~~~~~~~~dva~~v~~l~s~~ 247 (249)
+.+++.+++|+|+++++++++.
T Consensus 209 ~~~~~~~~~~dva~~~~~l~~~~ 231 (255)
T 2dkn_A 209 APLGRGSEPREVAEAIAFLLGPQ 231 (255)
T ss_dssp CTTSSCBCHHHHHHHHHHHHSGG
T ss_pred HHhcCCCCHHHHHHHHHHHhCCC
Confidence 6778999999999999999875
|
| >3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-32 Score=277.88 Aligned_cols=228 Identities=14% Similarity=0.066 Sum_probs=175.4
Q ss_pred CCCCcEEEEecCCCc-hhHHHHHHHHHcCCeEEEEeCCcch-----HHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHH
Q 025672 9 ILKGKVALLTGGGSG-IGFEISLQLGKHGAAIAIMGRRKTV-----LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVES 82 (249)
Q Consensus 9 ~l~~k~~lItGa~~g-iG~~~a~~l~~~G~~v~l~~r~~~~-----~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~ 82 (249)
.++||++|||||++| ||+++|+.|++.|++|++++|+.+. ++++.+++...+.++..+.||++|++++++++++
T Consensus 2133 ~l~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~G~~~~~v~~Dvtd~~~v~~lv~~ 2212 (3089)
T 3zen_D 2133 XXXDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARFDATLWVVPANMASYSDIDKLVEW 2212 (3089)
T ss_dssp CCCCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred cCCCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHH
Confidence 489999999999999 9999999999999999999999877 6777777766677889999999999999999999
Q ss_pred HHH----HhCCccEEEEcCCC----CCC-CCCCCCCHHHH----HHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCc
Q 025672 83 TIN----HFGKLDILVNAAAG----NFL-VPAEDLSPNGF----RTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGG 149 (249)
Q Consensus 83 ~~~----~~~~id~vi~~ag~----~~~-~~~~~~~~~~~----~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g 149 (249)
+.+ .||++|++|||||+ ... ....+.+.++| +..+++|+.+++.+++.+.+.|..+..... .+
T Consensus 2213 i~~~~~~~fG~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~m~~~~~g~~----~~ 2288 (3089)
T 3zen_D 2213 VGTEQTESLGPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSKIGAERDIASR----LH 2288 (3089)
T ss_dssp HTSCCEEEESSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCC----EE
T ss_pred HHhhhhhhcCCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCce----eE
Confidence 998 89999999999997 221 22233344444 445999999999999999999987643110 12
Q ss_pred eEEEeccccccccCccchhhHHHHHHHHHHHHHHHHH--hcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcc
Q 025672 150 IIINISATLHYTATWYQIHVSAAKAAVDSITRSLALE--WGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAA 227 (249)
Q Consensus 150 ~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~e--~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~ 227 (249)
.|+.+|+..+. .++...|++||+|+.+|+|+|+.| |+ + +|+||+|+||+|+|+.+...... ........+.
T Consensus 2289 ii~~~ss~~g~--~g~~~aYsASKaAl~~LtrslA~E~~~a-~-~IrVn~v~PG~v~tT~l~~~~~~---~~~~~~~~~~ 2361 (3089)
T 3zen_D 2289 VVLPGSPNRGM--FGGDGAYGEAKSALDALENRWSAEKSWA-E-RVSLAHALIGWTKGTGLMGQNDA---IVSAVEEAGV 2361 (3089)
T ss_dssp EEEEECSSTTS--CSSCSSHHHHGGGHHHHHHHHHHCSTTT-T-TEEEEEEECCCEECSTTTTTTTT---THHHHGGGSC
T ss_pred EEEECCccccc--CCCchHHHHHHHHHHHHHHHHHhccccC-C-CeEEEEEeecccCCCcccccchh---HHHHHHhcCC
Confidence 33444444332 234568999999999999999999 76 4 69999999999994443322111 1112223343
Q ss_pred cCCCCHHHHHHHHHHhccCCC
Q 025672 228 YKFGEKWDIAMAALYLASDAG 248 (249)
Q Consensus 228 ~~~~~~~dva~~v~~l~s~~a 248 (249)
+ ..+|+|||.+++||+|+++
T Consensus 2362 r-~~~PeEIA~avlfLaS~~a 2381 (3089)
T 3zen_D 2362 T-TYTTDEMAAMLLDLCTVET 2381 (3089)
T ss_dssp B-CEEHHHHHHHHHHTTSHHH
T ss_pred C-CCCHHHHHHHHHHHhChhh
Confidence 3 4499999999999999874
|
| >3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-32 Score=241.12 Aligned_cols=212 Identities=17% Similarity=0.145 Sum_probs=175.2
Q ss_pred CcEEEEecCCCchhHHHHHHHHHcCC-eEEEEeCCc---chHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 12 GKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRK---TVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 12 ~k~~lItGa~~giG~~~a~~l~~~G~-~v~l~~r~~---~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
++++|||||++|||++++++|+++|+ +|++++|+. +..+++.+++...+.++.++.||++|+++++++++++.+.
T Consensus 239 ~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~- 317 (496)
T 3mje_A 239 HGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADREALAALLAELPED- 317 (496)
T ss_dssp CSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTCCTT-
T ss_pred CCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHh-
Confidence 49999999999999999999999999 799999963 3467788888888899999999999999999999998776
Q ss_pred CCccEEEEcCCCC-CCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccc
Q 025672 88 GKLDILVNAAAGN-FLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ 166 (249)
Q Consensus 88 ~~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~ 166 (249)
+++|+||||||+. ...++.+.+.++|+..+++|+.+++++.+++.+. . .++||++||..+..+.+++
T Consensus 318 g~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~----~--------~~~iV~~SS~a~~~g~~g~ 385 (496)
T 3mje_A 318 APLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADL----D--------LDAFVLFSSGAAVWGSGGQ 385 (496)
T ss_dssp SCEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTS----C--------CSEEEEEEEHHHHTTCTTC
T ss_pred CCCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhcc----C--------CCEEEEEeChHhcCCCCCc
Confidence 7899999999998 6788899999999999999999999998877643 2 2779999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhccC
Q 025672 167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246 (249)
Q Consensus 167 ~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~ 246 (249)
..|+++|+++++|++.++ ..||++++|+||++.++.+.... ...+.+... .....+|+++++++.++++.
T Consensus 386 ~~YaAaKa~ldala~~~~-----~~Gi~v~sV~pG~w~~~gm~~~~---~~~~~l~~~--g~~~l~pe~~~~~l~~~l~~ 455 (496)
T 3mje_A 386 PGYAAANAYLDALAEHRR-----SLGLTASSVAWGTWGEVGMATDP---EVHDRLVRQ--GVLAMEPEHALGALDQMLEN 455 (496)
T ss_dssp HHHHHHHHHHHHHHHHHH-----HTTCCCEEEEECEESSSCC---------CHHHHHT--TEEEECHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH-----hcCCeEEEEECCcccCCccccCh---HHHHHHHhc--CCCCCCHHHHHHHHHHHHcC
Confidence 999999999998887543 56899999999999866554321 111112111 11245899999999988754
|
| >3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} | Back alignment and structure |
|---|
Probab=99.98 E-value=2.4e-32 Score=253.21 Aligned_cols=212 Identities=18% Similarity=0.124 Sum_probs=176.6
Q ss_pred CCcEEEEecCCCchhHHHHHHHH-HcCC-eEEEEeCC---cchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHH
Q 025672 11 KGKVALLTGGGSGIGFEISLQLG-KHGA-AIAIMGRR---KTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN 85 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~-~~G~-~v~l~~r~---~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 85 (249)
.+|++|||||++|||+++|++|+ ++|+ +|++++|+ .+..+++.+++...|.++.++.||++|+++++++++++.+
T Consensus 529 ~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G~~v~~~~~Dvsd~~~v~~~~~~~~~ 608 (795)
T 3slk_A 529 AAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYGAEVSLQACDVADRETLAKVLASIPD 608 (795)
T ss_dssp TTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCT
T ss_pred cccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Confidence 68999999999999999999999 7999 59999998 5567788888888899999999999999999999999887
Q ss_pred HhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCcc
Q 025672 86 HFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY 165 (249)
Q Consensus 86 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~ 165 (249)
.+ +||+||||||+....++.+.+.++|++.+++|+.|++++.+++.+.| +||++||..+..+.++
T Consensus 609 ~~-~id~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~~l--------------~iV~~SS~ag~~g~~g 673 (795)
T 3slk_A 609 EH-PLTAVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELIDPDV--------------ALVLFSSVSGVLGSGG 673 (795)
T ss_dssp TS-CEEEEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSCTTS--------------EEEEEEETHHHHTCSS
T ss_pred hC-CCEEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHhhCC--------------EEEEEccHHhcCCCCC
Confidence 76 89999999999888889999999999999999999999999987655 3999999999999999
Q ss_pred chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhcc
Q 025672 166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245 (249)
Q Consensus 166 ~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s 245 (249)
+..|+++|+ |+++|+++++ +.||++|+|+||++.|+.+...... ...+.+ ....+ ...+++|....+.+++.
T Consensus 674 ~~~YaAaka----~~~alA~~~~-~~Gi~v~sI~pG~v~t~g~~~~~~~-~~~~~~-~~~g~-~~l~~~e~~~~~~~~l~ 745 (795)
T 3slk_A 674 QGNYAAANS----FLDALAQQRQ-SRGLPTRSLAWGPWAEHGMASTLRE-AEQDRL-ARSGL-LPISTEEGLSQFDAACG 745 (795)
T ss_dssp CHHHHHHHH----HHHHHHHHHH-HTTCCEEEEEECCCSCCCHHHHHHH-HHHHHH-HHTTB-CCCCHHHHHHHHHHHHT
T ss_pred CHHHHHHHH----HHHHHHHHHH-HcCCeEEEEECCeECcchhhccccH-HHHHHH-HhcCC-CCCCHHHHHHHHHHHHh
Confidence 999999995 6677777777 7899999999999997655433211 111212 22233 34566777766666553
|
| >2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.6e-30 Score=228.03 Aligned_cols=213 Identities=15% Similarity=0.070 Sum_probs=172.7
Q ss_pred CCCcEEEEecCCCchhHHHHHHHHHcCCe-EEEEeCCcc---hHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHH
Q 025672 10 LKGKVALLTGGGSGIGFEISLQLGKHGAA-IAIMGRRKT---VLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN 85 (249)
Q Consensus 10 l~~k~~lItGa~~giG~~~a~~l~~~G~~-v~l~~r~~~---~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 85 (249)
-.++++|||||+||||++++++|+++|++ |++++|+.. ..+++.+++...+.++.++.||++|+++++++++++ +
T Consensus 224 ~~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i-~ 302 (486)
T 2fr1_A 224 KPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGI-G 302 (486)
T ss_dssp CCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTS-C
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHH-H
Confidence 35899999999999999999999999994 999999875 466777888777888999999999999999999988 5
Q ss_pred HhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCcc
Q 025672 86 HFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY 165 (249)
Q Consensus 86 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~ 165 (249)
.++++|+||||||.....++.+.+.++++..+++|+.|++++.+++.+ .. .++||++||..+..+.++
T Consensus 303 ~~g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~----~~--------~~~~V~~SS~a~~~g~~g 370 (486)
T 2fr1_A 303 DDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRE----LD--------LTAFVLFSSFASAFGAPG 370 (486)
T ss_dssp TTSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTT----SC--------CSEEEEEEEHHHHTCCTT
T ss_pred hcCCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCc----CC--------CCEEEEEcChHhcCCCCC
Confidence 678999999999988777888899999999999999999999987743 22 378999999999999999
Q ss_pred chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhcc
Q 025672 166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245 (249)
Q Consensus 166 ~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s 245 (249)
+..|+++|++++.|.+.+ . ..|+++++|+||++.++.+.... ....+.. ......+++|+++++.++++
T Consensus 371 ~~~Yaaaka~l~~la~~~----~-~~gi~v~~i~pG~~~~~gm~~~~----~~~~~~~--~g~~~i~~e~~a~~l~~~l~ 439 (486)
T 2fr1_A 371 LGGYAPGNAYLDGLAQQR----R-SDGLPATAVAWGTWAGSGMAEGP----VADRFRR--HGVIEMPPETACRALQNALD 439 (486)
T ss_dssp CTTTHHHHHHHHHHHHHH----H-HTTCCCEEEEECCBC----------------CTT--TTEECBCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHH----H-hcCCeEEEEECCeeCCCcccchh----HHHHHHh--cCCCCCCHHHHHHHHHHHHh
Confidence 999999999999886644 3 55899999999999865333221 1111111 11235789999999999886
Q ss_pred C
Q 025672 246 D 246 (249)
Q Consensus 246 ~ 246 (249)
.
T Consensus 440 ~ 440 (486)
T 2fr1_A 440 R 440 (486)
T ss_dssp T
T ss_pred C
Confidence 4
|
| >2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.9e-29 Score=222.20 Aligned_cols=209 Identities=18% Similarity=0.139 Sum_probs=171.8
Q ss_pred CCCcEEEEecCCCchhHHHHHHHHHcCC-eEEEEeCCcc---hHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHH
Q 025672 10 LKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKT---VLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN 85 (249)
Q Consensus 10 l~~k~~lItGa~~giG~~~a~~l~~~G~-~v~l~~r~~~---~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 85 (249)
-.++++|||||+||||++++++|+++|+ +|++++|+.. ..+++.+++...+.++.++.||++|++++++++++
T Consensus 257 ~~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~--- 333 (511)
T 2z5l_A 257 QPSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAERDALAALVTA--- 333 (511)
T ss_dssp CCCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSCHHHHHHHHHH---
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhc---
Confidence 3579999999999999999999999999 6999999864 46777788887788899999999999999999876
Q ss_pred HhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCcc
Q 025672 86 HFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY 165 (249)
Q Consensus 86 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~ 165 (249)
+++|+||||||+.....+.+.+.++++..+++|+.+++++.+++.+.. . .++||++||..+..+.++
T Consensus 334 --~~ld~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~---~--------~~~~V~~SS~a~~~g~~g 400 (511)
T 2z5l_A 334 --YPPNAVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADIK---G--------LDAFVLFSSVTGTWGNAG 400 (511)
T ss_dssp --SCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSCT---T--------CCCEEEEEEGGGTTCCTT
T ss_pred --CCCcEEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhcc---C--------CCEEEEEeCHHhcCCCCC
Confidence 689999999999887888889999999999999999999988764220 1 277999999999999999
Q ss_pred chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcc-ccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhc
Q 025672 166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPI-KDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLA 244 (249)
Q Consensus 166 ~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v-~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~ 244 (249)
+..|+++|++++.|++.+ . ..||++++|+||++ +|.+ ...... ..+.. ......+++|+++++..++
T Consensus 401 ~~~YaaaKa~ld~la~~~----~-~~gi~v~sv~pG~~~~tgm-~~~~~~----~~~~~--~g~~~l~~e~~a~~l~~al 468 (511)
T 2z5l_A 401 QGAYAAANAALDALAERR----R-AAGLPATSVAWGLWGGGGM-AAGAGE----ESLSR--RGLRAMDPDAAVDALLGAM 468 (511)
T ss_dssp BHHHHHHHHHHHHHHHHH----H-TTTCCCEEEEECCBCSTTC-CCCHHH----HHHHH--HTBCCBCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHH----H-HcCCcEEEEECCcccCCcc-cccccH----HHHHh--cCCCCCCHHHHHHHHHHHH
Confidence 999999999999998864 3 56899999999999 4433 222111 11111 1124678999999999887
Q ss_pred cC
Q 025672 245 SD 246 (249)
Q Consensus 245 s~ 246 (249)
..
T Consensus 469 ~~ 470 (511)
T 2z5l_A 469 GR 470 (511)
T ss_dssp HH
T ss_pred hC
Confidence 53
|
| >3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=5.7e-28 Score=197.89 Aligned_cols=182 Identities=12% Similarity=0.060 Sum_probs=146.5
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCc
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 90 (249)
++|++|||||+||||++++++|+++|++|++++|+..+.+ +.++.++.+|++|+++++++++ ++
T Consensus 2 ~~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~---------~~~~~~~~~Dl~d~~~~~~~~~-------~~ 65 (267)
T 3rft_A 2 AMKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA---------GPNEECVQCDLADANAVNAMVA-------GC 65 (267)
T ss_dssp CEEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC---------CTTEEEEECCTTCHHHHHHHHT-------TC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc---------CCCCEEEEcCCCCHHHHHHHHc-------CC
Confidence 4689999999999999999999999999999999876432 4578999999999999998876 68
Q ss_pred cEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccc----------
Q 025672 91 DILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY---------- 160 (249)
Q Consensus 91 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~---------- 160 (249)
|+||||||.. +.+.|+..+++|+.+++++++++.+ .+ .++||++||..++
T Consensus 66 D~vi~~Ag~~--------~~~~~~~~~~~N~~g~~~l~~a~~~----~~--------~~~iv~~SS~~~~g~~~~~~~~~ 125 (267)
T 3rft_A 66 DGIVHLGGIS--------VEKPFEQILQGNIIGLYNLYEAARA----HG--------QPRIVFASSNHTIGYYPQTERLG 125 (267)
T ss_dssp SEEEECCSCC--------SCCCHHHHHHHHTHHHHHHHHHHHH----TT--------CCEEEEEEEGGGGTTSBTTSCBC
T ss_pred CEEEECCCCc--------CcCCHHHHHHHHHHHHHHHHHHHHH----cC--------CCEEEEEcchHHhCCCCCCCCCC
Confidence 9999999973 3345789999999999999999943 22 2789999998776
Q ss_pred --ccCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHH
Q 025672 161 --TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAM 238 (249)
Q Consensus 161 --~~~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~ 238 (249)
.+..+...|+.||.+++.+++.++.++ |++++.|.||.+.++..... . ...+.+++|+++
T Consensus 126 e~~~~~~~~~Y~~sK~~~e~~~~~~a~~~----g~~~~~vr~~~v~~~~~~~~----~----------~~~~~~~~d~a~ 187 (267)
T 3rft_A 126 PDVPARPDGLYGVSKCFGENLARMYFDKF----GQETALVRIGSCTPEPNNYR----M----------LSTWFSHDDFVS 187 (267)
T ss_dssp TTSCCCCCSHHHHHHHHHHHHHHHHHHHH----CCCEEEEEECBCSSSCCSTT----H----------HHHBCCHHHHHH
T ss_pred CCCCCCCCChHHHHHHHHHHHHHHHHHHh----CCeEEEEEeecccCCCCCCC----c----------eeeEEcHHHHHH
Confidence 333456789999999999999999876 48899999999985432111 0 112467778887
Q ss_pred HHHHhccC
Q 025672 239 AALYLASD 246 (249)
Q Consensus 239 ~v~~l~s~ 246 (249)
++..++..
T Consensus 188 ~~~~~~~~ 195 (267)
T 3rft_A 188 LIEAVFRA 195 (267)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHhC
Confidence 77776644
|
| >3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.6e-27 Score=191.55 Aligned_cols=194 Identities=19% Similarity=0.165 Sum_probs=146.9
Q ss_pred CCCCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCe-eEEEccCCCHHHHHHHHHHH
Q 025672 5 FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPA-IGLEGDVRKREDAVRVVEST 83 (249)
Q Consensus 5 ~~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~-~~~~~Dl~~~~~~~~~~~~~ 83 (249)
....++++|++|||||+|+||++++++|+++|++|++++|+.++++.+.+ ..+ .++.+|++ +.+
T Consensus 14 ~~~~~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~------~~~~~~~~~Dl~---------~~~ 78 (236)
T 3e8x_A 14 RENLYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRE------RGASDIVVANLE---------EDF 78 (236)
T ss_dssp -------CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH------TTCSEEEECCTT---------SCC
T ss_pred ccccCcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHh------CCCceEEEcccH---------HHH
Confidence 34566899999999999999999999999999999999999887765443 257 89999999 234
Q ss_pred HHHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC
Q 025672 84 INHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT 163 (249)
Q Consensus 84 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~ 163 (249)
.+.++++|+||||||... .++++..+++|+.++.++++++... + .++||++||..+..+.
T Consensus 79 ~~~~~~~D~vi~~ag~~~--------~~~~~~~~~~n~~~~~~l~~a~~~~----~--------~~~iv~~SS~~~~~~~ 138 (236)
T 3e8x_A 79 SHAFASIDAVVFAAGSGP--------HTGADKTILIDLWGAIKTIQEAEKR----G--------IKRFIMVSSVGTVDPD 138 (236)
T ss_dssp GGGGTTCSEEEECCCCCT--------TSCHHHHHHTTTHHHHHHHHHHHHH----T--------CCEEEEECCTTCSCGG
T ss_pred HHHHcCCCEEEECCCCCC--------CCCccccchhhHHHHHHHHHHHHHc----C--------CCEEEEEecCCCCCCC
Confidence 445678999999999643 2457889999999999999988532 2 2789999997776654
Q ss_pred ---ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHH
Q 025672 164 ---WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAA 240 (249)
Q Consensus 164 ---~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v 240 (249)
.+...|+.+|.+++.+++ ..||+++.|.||++.++........ .........+.+++|+|+++
T Consensus 139 ~~~~~~~~Y~~sK~~~e~~~~--------~~gi~~~~lrpg~v~~~~~~~~~~~------~~~~~~~~~~i~~~Dva~~~ 204 (236)
T 3e8x_A 139 QGPMNMRHYLVAKRLADDELK--------RSSLDYTIVRPGPLSNEESTGKVTV------SPHFSEITRSITRHDVAKVI 204 (236)
T ss_dssp GSCGGGHHHHHHHHHHHHHHH--------HSSSEEEEEEECSEECSCCCSEEEE------ESSCSCCCCCEEHHHHHHHH
T ss_pred CChhhhhhHHHHHHHHHHHHH--------HCCCCEEEEeCCcccCCCCCCeEEe------ccCCCcccCcEeHHHHHHHH
Confidence 567899999999998875 2479999999999997643222110 01111235577899999999
Q ss_pred HHhccCC
Q 025672 241 LYLASDA 247 (249)
Q Consensus 241 ~~l~s~~ 247 (249)
.+++++.
T Consensus 205 ~~~~~~~ 211 (236)
T 3e8x_A 205 AELVDQQ 211 (236)
T ss_dssp HHHTTCG
T ss_pred HHHhcCc
Confidence 9999765
|
| >2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A | Back alignment and structure |
|---|
Probab=99.95 E-value=1.3e-27 Score=192.61 Aligned_cols=196 Identities=15% Similarity=0.099 Sum_probs=149.5
Q ss_pred CCCcEEEEecCCCchhHHHHHHHHHcCC--eEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 10 LKGKVALLTGGGSGIGFEISLQLGKHGA--AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 10 l~~k~~lItGa~~giG~~~a~~l~~~G~--~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
+++|+++||||+|+||++++++|+++|+ +|++++|+.+.++... ..++.++.+|++|+++++++++
T Consensus 16 m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~------~~~~~~~~~D~~d~~~~~~~~~------ 83 (242)
T 2bka_A 16 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA------YKNVNQEVVDFEKLDDYASAFQ------ 83 (242)
T ss_dssp HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG------GGGCEEEECCGGGGGGGGGGGS------
T ss_pred hcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccc------cCCceEEecCcCCHHHHHHHhc------
Confidence 5789999999999999999999999999 9999999876543211 1257889999999998877654
Q ss_pred CCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch
Q 025672 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 167 (249)
Q Consensus 88 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~ 167 (249)
++|+||||||... ...+++..+++|+.++.++++++. +.+ .++||++||..++.+ +..
T Consensus 84 -~~d~vi~~ag~~~-------~~~~~~~~~~~n~~~~~~~~~~~~----~~~--------~~~iv~~SS~~~~~~--~~~ 141 (242)
T 2bka_A 84 -GHDVGFCCLGTTR-------GKAGAEGFVRVDRDYVLKSAELAK----AGG--------CKHFNLLSSKGADKS--SNF 141 (242)
T ss_dssp -SCSEEEECCCCCH-------HHHHHHHHHHHHTHHHHHHHHHHH----HTT--------CCEEEEECCTTCCTT--CSS
T ss_pred -CCCEEEECCCccc-------ccCCcccceeeeHHHHHHHHHHHH----HCC--------CCEEEEEccCcCCCC--Ccc
Confidence 6999999999642 124568889999999999888754 332 278999999877653 356
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCe-EEEEEecCccccccccCCCChHHHHHhhhhhhc----ccCCCCHHHHHHHHHH
Q 025672 168 HVSAAKAAVDSITRSLALEWGTDYAI-RVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMA----AYKFGEKWDIAMAALY 242 (249)
Q Consensus 168 ~y~~sK~a~~~l~~~la~e~~~~~gi-~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~dva~~v~~ 242 (249)
.|+.+|++++.+++.+ ++ +++.|+||++.|+..... ..+.+.+......| .+++.+++|+|+++++
T Consensus 142 ~Y~~sK~~~e~~~~~~--------~~~~~~~vrpg~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~ 212 (242)
T 2bka_A 142 LYLQVKGEVEAKVEEL--------KFDRYSVFRPGVLLCDRQESR-PGEWLVRKFFGSLPDSWASGHSVPVVTVVRAMLN 212 (242)
T ss_dssp HHHHHHHHHHHHHHTT--------CCSEEEEEECCEEECTTGGGS-HHHHHHHHHHCSCCTTGGGGTEEEHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhc--------CCCCeEEEcCceecCCCCCCc-HHHHHHHHhhcccCccccCCcccCHHHHHHHHHH
Confidence 7999999999887542 35 899999999998753221 12222232222333 5678899999999999
Q ss_pred hccCCC
Q 025672 243 LASDAG 248 (249)
Q Consensus 243 l~s~~a 248 (249)
++++..
T Consensus 213 ~~~~~~ 218 (242)
T 2bka_A 213 NVVRPR 218 (242)
T ss_dssp HHTSCC
T ss_pred HHhCcc
Confidence 998764
|
| >2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=4e-26 Score=193.47 Aligned_cols=208 Identities=16% Similarity=0.111 Sum_probs=162.8
Q ss_pred CCCCCCcEEEEecCCCchhHHHHHHHHHc-CC-eEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHH
Q 025672 7 GDILKGKVALLTGGGSGIGFEISLQLGKH-GA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTI 84 (249)
Q Consensus 7 ~~~l~~k~~lItGa~~giG~~~a~~l~~~-G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 84 (249)
...+++|++|||||+|+||++++++|+++ |+ +|++++|++.+.+.+.+++. ..++.++.+|++|.++++++++
T Consensus 16 ~~~~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~--~~~v~~~~~Dl~d~~~l~~~~~--- 90 (344)
T 2gn4_A 16 QNMLDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFN--DPRMRFFIGDVRDLERLNYALE--- 90 (344)
T ss_dssp CCTTTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHC--CTTEEEEECCTTCHHHHHHHTT---
T ss_pred HHhhCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhc--CCCEEEEECCCCCHHHHHHHHh---
Confidence 34578999999999999999999999999 98 99999999887777776664 3578999999999999887764
Q ss_pred HHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCc
Q 025672 85 NHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW 164 (249)
Q Consensus 85 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~ 164 (249)
++|+|||+||..... .........+++|+.++.++++++.+. + .++||++||..+..+
T Consensus 91 ----~~D~Vih~Aa~~~~~----~~~~~~~~~~~~Nv~gt~~l~~aa~~~----~--------v~~~V~~SS~~~~~p-- 148 (344)
T 2gn4_A 91 ----GVDICIHAAALKHVP----IAEYNPLECIKTNIMGASNVINACLKN----A--------ISQVIALSTDKAANP-- 148 (344)
T ss_dssp ----TCSEEEECCCCCCHH----HHHHSHHHHHHHHHHHHHHHHHHHHHT----T--------CSEEEEECCGGGSSC--
T ss_pred ----cCCEEEECCCCCCCC----chhcCHHHHHHHHHHHHHHHHHHHHhC----C--------CCEEEEecCCccCCC--
Confidence 689999999964311 112345688999999999999999864 1 267999999766543
Q ss_pred cchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhh---hc------ccCCCCHHH
Q 025672 165 YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDY---MA------AYKFGEKWD 235 (249)
Q Consensus 165 ~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~---~~------~~~~~~~~d 235 (249)
...|+.+|++.+.+++.++++++ +.|+++++|.||.+.++... ..+.+.+..... .+ .+.+.+++|
T Consensus 149 -~~~Y~~sK~~~E~~~~~~~~~~~-~~g~~~~~vRpg~v~g~~~~---~i~~~~~~~~~g~~~~~i~~~~~~r~~i~v~D 223 (344)
T 2gn4_A 149 -INLYGATKLCSDKLFVSANNFKG-SSQTQFSVVRYGNVVGSRGS---VVPFFKKLVQNKASEIPITDIRMTRFWITLDE 223 (344)
T ss_dssp -CSHHHHHHHHHHHHHHHGGGCCC-SSCCEEEEECCCEETTCTTS---HHHHHHHHHHHTCCCEEESCTTCEEEEECHHH
T ss_pred -ccHHHHHHHHHHHHHHHHHHHhC-CCCcEEEEEEeccEECCCCC---HHHHHHHHHHcCCCceEEeCCCeEEeeEEHHH
Confidence 46899999999999999999887 78999999999999975421 112233322221 11 123578999
Q ss_pred HHHHHHHhccC
Q 025672 236 IAMAALYLASD 246 (249)
Q Consensus 236 va~~v~~l~s~ 246 (249)
+++++++++..
T Consensus 224 ~a~~v~~~l~~ 234 (344)
T 2gn4_A 224 GVSFVLKSLKR 234 (344)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHhh
Confidence 99999998864
|
| >1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A | Back alignment and structure |
|---|
Probab=99.94 E-value=1e-25 Score=190.15 Aligned_cols=211 Identities=15% Similarity=0.034 Sum_probs=161.0
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHh-cCCCeeEE-EccCCCHHHHHHHHHHHHHH
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHS-LGIPAIGL-EGDVRKREDAVRVVESTINH 86 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~-~~~~~~~~-~~Dl~~~~~~~~~~~~~~~~ 86 (249)
.+++|++|||||+|+||++++++|+++|++|++++|+.+..+.+.+.+.. .+.++.++ .+|++|.++++++++
T Consensus 8 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----- 82 (342)
T 1y1p_A 8 LPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIK----- 82 (342)
T ss_dssp SCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTT-----
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHc-----
Confidence 46789999999999999999999999999999999998777666655543 23578888 899999988877654
Q ss_pred hCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc-cC--
Q 025672 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT-AT-- 163 (249)
Q Consensus 87 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~-~~-- 163 (249)
++|+|||+||..... +++...+++|+.++.++++++.+. .+ .++||++||...+. +.
T Consensus 83 --~~d~vih~A~~~~~~-------~~~~~~~~~n~~g~~~ll~~~~~~---~~--------~~~iv~~SS~~~~~~~~~~ 142 (342)
T 1y1p_A 83 --GAAGVAHIASVVSFS-------NKYDEVVTPAIGGTLNALRAAAAT---PS--------VKRFVLTSSTVSALIPKPN 142 (342)
T ss_dssp --TCSEEEECCCCCSCC-------SCHHHHHHHHHHHHHHHHHHHHTC---TT--------CCEEEEECCGGGTCCCCTT
T ss_pred --CCCEEEEeCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHhC---CC--------CcEEEEeccHHHhcCCCCC
Confidence 699999999965421 245778999999999999988742 11 27899999986652 11
Q ss_pred ----------------------------ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCC---
Q 025672 164 ----------------------------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL--- 212 (249)
Q Consensus 164 ----------------------------~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~--- 212 (249)
.+...|+.+|.+.+.+++.++.+++ . +++++.+.||.+.++......
T Consensus 143 ~~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~-~-~~~~~~~rp~~v~g~~~~~~~~~~ 220 (342)
T 1y1p_A 143 VEGIYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENK-P-HFTLNAVLPNYTIGTIFDPETQSG 220 (342)
T ss_dssp CCCCEECTTCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHC-C-SSEEEEEEESEEECCCSCTTTCCC
T ss_pred CCCcccCccccCchhhhhhccccccccccchHHHHHHHHHHHHHHHHHHHhcC-C-CceEEEEcCCceECCCCCCCCCCc
Confidence 1346799999999999999999986 5 899999999999987543321
Q ss_pred ChHHHHHhhhhh--------hcccCCCCHHHHHHHHHHhccC
Q 025672 213 APEEIRSKATDY--------MAAYKFGEKWDIAMAALYLASD 246 (249)
Q Consensus 213 ~~~~~~~~~~~~--------~~~~~~~~~~dva~~v~~l~s~ 246 (249)
....+...+... .+...+.+++|+|+++++++..
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~ 262 (342)
T 1y1p_A 221 STSGWMMSLFNGEVSPALALMPPQYYVSAVDIGLLHLGCLVL 262 (342)
T ss_dssp HHHHHHHHHHTTCCCHHHHTCCSEEEEEHHHHHHHHHHHHHC
T ss_pred cHHHHHHHHHcCCCccccccCCcCCEeEHHHHHHHHHHHHcC
Confidence 112222222111 1234567899999999998864
|
| >3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=2.6e-25 Score=176.94 Aligned_cols=180 Identities=10% Similarity=0.050 Sum_probs=138.4
Q ss_pred cEEEEecCCCchhHHHHHHHH-HcCCeEEEEeCCcc-hHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCc
Q 025672 13 KVALLTGGGSGIGFEISLQLG-KHGAAIAIMGRRKT-VLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (249)
Q Consensus 13 k~~lItGa~~giG~~~a~~l~-~~G~~v~l~~r~~~-~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 90 (249)
|+++||||+|+||++++++|+ ++|++|++++|+.+ +++++. ..+.++.++.+|++|+++++++++ .+
T Consensus 6 k~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~~D~~d~~~~~~~~~-------~~ 74 (221)
T 3r6d_A 6 XYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEI----IDHERVTVIEGSFQNPGXLEQAVT-------NA 74 (221)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHH----HTSTTEEEEECCTTCHHHHHHHHT-------TC
T ss_pred EEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhc----cCCCceEEEECCCCCHHHHHHHHc-------CC
Confidence 789999999999999999999 89999999999977 555443 235679999999999999988875 68
Q ss_pred cEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch---
Q 025672 91 DILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI--- 167 (249)
Q Consensus 91 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~--- 167 (249)
|+||||+|.. |+. ++.+++.+.+.+. ++||++||...+.+.+...
T Consensus 75 d~vv~~ag~~-------------------n~~-----~~~~~~~~~~~~~--------~~iv~iSs~~~~~~~~~~~~~~ 122 (221)
T 3r6d_A 75 EVVFVGAMES-------------------GSD-----MASIVKALSRXNI--------RRVIGVSMAGLSGEFPVALEKW 122 (221)
T ss_dssp SEEEESCCCC-------------------HHH-----HHHHHHHHHHTTC--------CEEEEEEETTTTSCSCHHHHHH
T ss_pred CEEEEcCCCC-------------------Chh-----HHHHHHHHHhcCC--------CeEEEEeeceecCCCCcccccc
Confidence 9999999842 222 7778888877653 7899999998877655444
Q ss_pred -------hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHH
Q 025672 168 -------HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAA 240 (249)
Q Consensus 168 -------~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v 240 (249)
.|+.+|.+++.+++ ..||+++.|+||++.++........ ........+++.+++|+|+++
T Consensus 123 ~~~~~~~~y~~~K~~~e~~~~--------~~~i~~~~vrpg~v~~~~~~~~~~~-----~~~~~~~~~~~~~~~dvA~~~ 189 (221)
T 3r6d_A 123 TFDNLPISYVQGERQARNVLR--------ESNLNYTILRLTWLYNDPEXTDYEL-----IPEGAQFNDAQVSREAVVKAI 189 (221)
T ss_dssp HHHTSCHHHHHHHHHHHHHHH--------HSCSEEEEEEECEEECCTTCCCCEE-----ECTTSCCCCCEEEHHHHHHHH
T ss_pred cccccccHHHHHHHHHHHHHH--------hCCCCEEEEechhhcCCCCCcceee-----ccCCccCCCceeeHHHHHHHH
Confidence 89999999988764 2479999999999986633222110 001111123467899999999
Q ss_pred HHhc--cCCC
Q 025672 241 LYLA--SDAG 248 (249)
Q Consensus 241 ~~l~--s~~a 248 (249)
+||+ ++.+
T Consensus 190 ~~l~~~~~~~ 199 (221)
T 3r6d_A 190 FDILHAADET 199 (221)
T ss_dssp HHHHTCSCCG
T ss_pred HHHHHhcChh
Confidence 9999 7754
|
| >1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.94 E-value=9.2e-25 Score=184.70 Aligned_cols=209 Identities=15% Similarity=0.085 Sum_probs=156.2
Q ss_pred cEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCc-chHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCcc
Q 025672 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK-TVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD 91 (249)
Q Consensus 13 k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 91 (249)
|++|||||+|+||++++++|+++|++|++++|+. ...+...+.+.. ..++.++.+|++|.++++++++.. ++|
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~-~~~~~~~~~Dl~d~~~~~~~~~~~-----~~d 75 (347)
T 1orr_A 2 AKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSS-LGNFEFVHGDIRNKNDVTRLITKY-----MPD 75 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHT-TCCCEEEECCTTCHHHHHHHHHHH-----CCS
T ss_pred cEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhcc-CCceEEEEcCCCCHHHHHHHHhcc-----CCC
Confidence 5799999999999999999999999999999864 233333444443 246889999999999999998752 699
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc----------
Q 025672 92 ILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT---------- 161 (249)
Q Consensus 92 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~---------- 161 (249)
+|||+||.... +.+.++++..+++|+.++.++++++.+.+.+ ++||++||...+.
T Consensus 76 ~vih~A~~~~~----~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~-----------~~iv~~SS~~v~g~~~~~~~~e~ 140 (347)
T 1orr_A 76 SCFHLAGQVAM----TTSIDNPCMDFEINVGGTLNLLEAVRQYNSN-----------CNIIYSSTNKVYGDLEQYKYNET 140 (347)
T ss_dssp EEEECCCCCCH----HHHHHCHHHHHHHHHHHHHHHHHHHHHHCTT-----------CEEEEEEEGGGGTTCTTSCEEEC
T ss_pred EEEECCcccCh----hhhhhCHHHHHHHHHHHHHHHHHHHHHhCCC-----------ceEEEeccHHHhCCCCcCCcccc
Confidence 99999996431 1234567889999999999999999876422 5799999976432
Q ss_pred -----------------cCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCC---hHHHHHhh
Q 025672 162 -----------------ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA---PEEIRSKA 221 (249)
Q Consensus 162 -----------------~~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~---~~~~~~~~ 221 (249)
+..+...|+.+|.+.+.+++.++.++ |++++.|.||++.++....... ...+....
T Consensus 141 ~~~~~~~~~~~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~----gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~ 216 (347)
T 1orr_A 141 ETRYTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIF----GLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKA 216 (347)
T ss_dssp SSCEEETTCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHH----CCEEEEEEECCEECTTCCCBTTBCHHHHHHHHH
T ss_pred cccccccccccCccccCCCCCCCchHHHHHHHHHHHHHHHHHh----CCcEEEEccCceeCcCCCCCCcCcHHHHHHHHH
Confidence 12356789999999999999999875 5999999999999875432211 12222222
Q ss_pred hhhh-----ccc---------CCCCHHHHHHHHHHhccC
Q 025672 222 TDYM-----AAY---------KFGEKWDIAMAALYLASD 246 (249)
Q Consensus 222 ~~~~-----~~~---------~~~~~~dva~~v~~l~s~ 246 (249)
.... +.. .+.+++|+|++++++++.
T Consensus 217 ~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~ 255 (347)
T 1orr_A 217 VEIKNGINKPFTISGNGKQVRDVLHAEDMISLYFTALAN 255 (347)
T ss_dssp HHHHTTCCCCEEEESSSCCEEECEEHHHHHHHHHHHHHT
T ss_pred HhCcccCCCCeEEecCCcceEeeEEHHHHHHHHHHHHhc
Confidence 2111 222 245899999999999863
|
| >2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.5e-25 Score=187.84 Aligned_cols=205 Identities=15% Similarity=0.093 Sum_probs=154.2
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
...+.+++|||||+|+||++++++|+++|++|++++|+... +. + ++.++.+|++|.++++++++.
T Consensus 8 ~~~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~----l-----~~~~~~~Dl~d~~~~~~~~~~----- 72 (321)
T 2pk3_A 8 HHHGSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KL----P-----NVEMISLDIMDSQRVKKVISD----- 72 (321)
T ss_dssp -----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CC----T-----TEEEEECCTTCHHHHHHHHHH-----
T ss_pred cccCcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-cc----c-----eeeEEECCCCCHHHHHHHHHh-----
Confidence 34567999999999999999999999999999999998764 21 1 588999999999999998875
Q ss_pred CCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC----
Q 025672 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT---- 163 (249)
Q Consensus 88 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~---- 163 (249)
+++|+|||+||..... .+.+++...+++|+.++.++++++ +.+. + .++||++||...+...
T Consensus 73 ~~~d~vih~A~~~~~~----~~~~~~~~~~~~Nv~g~~~l~~a~-~~~~--~--------~~~iv~~SS~~v~g~~~~~~ 137 (321)
T 2pk3_A 73 IKPDYIFHLAAKSSVK----DSWLNKKGTFSTNVFGTLHVLDAV-RDSN--L--------DCRILTIGSSEEYGMILPEE 137 (321)
T ss_dssp HCCSEEEECCSCCCHH----HHTTCHHHHHHHHHHHHHHHHHHH-HHHT--C--------CCEEEEEEEGGGTBSCCGGG
T ss_pred cCCCEEEEcCcccchh----hhhhcHHHHHHHHHHHHHHHHHHH-HHhC--C--------CCeEEEEccHHhcCCCCCCC
Confidence 3699999999964321 123467889999999999999999 5542 1 2789999998655332
Q ss_pred ---------ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhh---h-------
Q 025672 164 ---------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATD---Y------- 224 (249)
Q Consensus 164 ---------~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~---~------- 224 (249)
.+...|+.+|.+.+.+++.++.++ |++++.+.||.+.++..........+...+.. .
T Consensus 138 ~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~----gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 213 (321)
T 2pk3_A 138 SPVSEENQLRPMSPYGVSKASVGMLARQYVKAY----GMDIIHTRTFNHIGPGQSLGFVTQDFAKQIVDIEMEKQEPIIK 213 (321)
T ss_dssp CSBCTTSCCBCCSHHHHHHHHHHHHHHHHHHHH----CCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHHTTSSCSEEE
T ss_pred CCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHc----CCCEEEEEeCcccCcCCCCCchHHHHHHHHHHHhcCCCCCeEE
Confidence 456789999999999999999875 69999999999997754432112223332222 1
Q ss_pred ----hcccCCCCHHHHHHHHHHhccC
Q 025672 225 ----MAAYKFGEKWDIAMAALYLASD 246 (249)
Q Consensus 225 ----~~~~~~~~~~dva~~v~~l~s~ 246 (249)
.+...+.+++|+|+++++++++
T Consensus 214 ~~~~~~~~~~v~v~Dva~a~~~~~~~ 239 (321)
T 2pk3_A 214 VGNLEAVRDFTDVRDIVQAYWLLSQY 239 (321)
T ss_dssp ESCSSCEEEEEEHHHHHHHHHHHHHH
T ss_pred eCCCCcEEeeEEHHHHHHHHHHHHhC
Confidence 1123467899999999999864
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=1.9e-25 Score=226.34 Aligned_cols=178 Identities=16% Similarity=0.145 Sum_probs=142.8
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCCe-EEEEeCCcchH---HHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHH
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGAA-IAIMGRRKTVL---RSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~~-v~l~~r~~~~~---~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 86 (249)
.+|++|||||++|||+++|++|+++|++ |++++|+..+. ++..+++...+.++.++.||++|+++++++++++. .
T Consensus 1883 ~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~-~ 1961 (2512)
T 2vz8_A 1883 PHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQGVQVLVSTSNASSLDGARSLITEAT-Q 1961 (2512)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHTTCEEEEECCCSSSHHHHHHHHHHHH-H
T ss_pred CCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhCCCEEEEEecCCCCHHHHHHHHHHHH-h
Confidence 6899999999999999999999999996 88899986654 34555666667889999999999999999999986 4
Q ss_pred hCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccc
Q 025672 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ 166 (249)
Q Consensus 87 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~ 166 (249)
+++||+||||||+....++.+.+.++|++.+++|+.|++++.+++.+.|.+. |+||++||..+..+.+++
T Consensus 1962 ~g~id~lVnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~~----------g~iV~iSS~ag~~g~~g~ 2031 (2512)
T 2vz8_A 1962 LGPVGGVFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPEL----------DYFVIFSSVSCGRGNAGQ 2031 (2512)
T ss_dssp HSCEEEEEECCCC----------------CTTTTHHHHHHHHHHHHHHCTTC----------CEEEEECCHHHHTTCTTC
T ss_pred cCCCcEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhcccC----------CEEEEecchhhcCCCCCc
Confidence 7999999999998877888899999999999999999999999999887542 789999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccc
Q 025672 167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK 204 (249)
Q Consensus 167 ~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~ 204 (249)
..|+++|+++.+|++.++.+ |++..++.+|.+.
T Consensus 2032 ~~Y~aaKaal~~l~~~rr~~-----Gl~~~a~~~g~~~ 2064 (2512)
T 2vz8_A 2032 ANYGFANSAMERICEKRRHD-----GLPGLAVQWGAIG 2064 (2512)
T ss_dssp HHHHHHHHHHHHHHHHHHHT-----TSCCCEEEECCBC
T ss_pred HHHHHHHHHHHHHHHHHHHC-----CCcEEEEEccCcC
Confidence 99999999999999987753 6777788777764
|
| >1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=2.1e-24 Score=183.50 Aligned_cols=216 Identities=17% Similarity=0.134 Sum_probs=162.0
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhC
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 88 (249)
.++++++|||||+|+||++++++|+++|++|++++|+....+.+.+.+. .+.++.++.+|++|++++.++++.+
T Consensus 6 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~----- 79 (357)
T 1rkx_A 6 FWQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETAR-VADGMQSEIGDIRDQNKLLESIREF----- 79 (357)
T ss_dssp HHTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTT-TTTTSEEEECCTTCHHHHHHHHHHH-----
T ss_pred hhCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhc-cCCceEEEEccccCHHHHHHHHHhc-----
Confidence 3678999999999999999999999999999999998776555444442 2457899999999999999998765
Q ss_pred CccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc-------
Q 025672 89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT------- 161 (249)
Q Consensus 89 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~------- 161 (249)
++|+|||+||... .+.+.+++...+++|+.++.++++++.+. .. .++||++||...+.
T Consensus 80 ~~d~vih~A~~~~----~~~~~~~~~~~~~~n~~~~~~l~~a~~~~---~~--------~~~~v~~SS~~vyg~~~~~~~ 144 (357)
T 1rkx_A 80 QPEIVFHMAAQPL----VRLSYSEPVETYSTNVMGTVYLLEAIRHV---GG--------VKAVVNITSDKCYDNKEWIWG 144 (357)
T ss_dssp CCSEEEECCSCCC----HHHHHHCHHHHHHHHTHHHHHHHHHHHHH---CC--------CCEEEEECCGGGBCCCCSSSC
T ss_pred CCCEEEECCCCcc----cccchhCHHHHHHHHHHHHHHHHHHHHHh---CC--------CCeEEEecCHHHhCCCCcCCC
Confidence 6999999999522 11234667889999999999999999763 11 26899999976432
Q ss_pred -----cCccchhhHHHHHHHHHHHHHHHHHhcC-----CCCeEEEEEecCccccccccCC-CChHHHHHhhhhhhc----
Q 025672 162 -----ATWYQIHVSAAKAAVDSITRSLALEWGT-----DYAIRVNGIAPGPIKDTAGVSK-LAPEEIRSKATDYMA---- 226 (249)
Q Consensus 162 -----~~~~~~~y~~sK~a~~~l~~~la~e~~~-----~~gi~v~~v~pG~v~t~~~~~~-~~~~~~~~~~~~~~~---- 226 (249)
+..+...|+.+|.+.+.+++.++.++.. +.|++++.|.||++.++..... .....+.+......+
T Consensus 145 ~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~ 224 (357)
T 1rkx_A 145 YRENEAMGGYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIR 224 (357)
T ss_dssp BCTTSCBCCSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEECS
T ss_pred CCCCCCCCCCCccHHHHHHHHHHHHHHHHHHhhhhccccCCceEEEEeeceeeCCCCCccccHHHHHHHHHhcCCCEEEC
Confidence 2234678999999999999999998730 2389999999999997653221 112233332222111
Q ss_pred ----ccCCCCHHHHHHHHHHhcc
Q 025672 227 ----AYKFGEKWDIAMAALYLAS 245 (249)
Q Consensus 227 ----~~~~~~~~dva~~v~~l~s 245 (249)
...+...+|++++++.++.
T Consensus 225 ~~~~~~~~v~v~Dva~a~~~~~~ 247 (357)
T 1rkx_A 225 NPHAIRPWQHVLEPLSGYLLLAQ 247 (357)
T ss_dssp CTTCEECCEETHHHHHHHHHHHH
T ss_pred CCCCeeccEeHHHHHHHHHHHHH
Confidence 1235678999999998875
|
| >3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.93 E-value=1.9e-24 Score=182.50 Aligned_cols=172 Identities=17% Similarity=0.084 Sum_probs=138.3
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHh-cCCCeeEEEccCCCHHHHHHHHHHHHHHhCC
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHS-LGIPAIGLEGDVRKREDAVRVVESTINHFGK 89 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 89 (249)
.++++|||||+|+||++++++|+++|++|++++|+.+..+...+.+.. .+.++.++.+|++|++++++++++ ++
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~~ 78 (341)
T 3enk_A 4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDA-----HP 78 (341)
T ss_dssp SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHH-----SC
T ss_pred CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhc-----cC
Confidence 468999999999999999999999999999999987776666555543 256789999999999999999875 47
Q ss_pred ccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc-------
Q 025672 90 LDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA------- 162 (249)
Q Consensus 90 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~------- 162 (249)
+|+||||||..... ...+.....+++|+.++.++++++. +.+ .++||++||...+..
T Consensus 79 ~d~vih~A~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~--------~~~iv~~SS~~~~g~~~~~~~~ 142 (341)
T 3enk_A 79 ITAAIHFAALKAVG----ESVAKPIEYYRNNLDSLLSLLRVMR----ERA--------VKRIVFSSSATVYGVPERSPID 142 (341)
T ss_dssp CCEEEECCCCCCHH----HHHHCHHHHHHHHHHHHHHHHHHHH----HTT--------CCEEEEEEEGGGBCSCSSSSBC
T ss_pred CcEEEECccccccC----ccccChHHHHHHHHHHHHHHHHHHH----hCC--------CCEEEEEecceEecCCCCCCCC
Confidence 99999999975321 1234456788999999999877654 333 278999999765421
Q ss_pred ----CccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccc
Q 025672 163 ----TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDT 206 (249)
Q Consensus 163 ----~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~ 206 (249)
..+...|+.+|.+.+.+++.++.++. +++++.+.||.+..+
T Consensus 143 e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~---~~~~~~lRp~~v~G~ 187 (341)
T 3enk_A 143 ETFPLSATNPYGQTKLMAEQILRDVEAADP---SWRVATLRYFNPVGA 187 (341)
T ss_dssp TTSCCBCSSHHHHHHHHHHHHHHHHHHHCT---TCEEEEEEECEEECC
T ss_pred CCCCCCCCChhHHHHHHHHHHHHHHhhcCC---CceEEEEeeccccCC
Confidence 22346899999999999999998863 699999999999865
|
| >2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=9.1e-25 Score=183.98 Aligned_cols=206 Identities=17% Similarity=0.078 Sum_probs=147.3
Q ss_pred CCCCCCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHH
Q 025672 3 SPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVES 82 (249)
Q Consensus 3 ~~~~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~ 82 (249)
++..+..++++++|||||+|+||++++++|+++|++|++++|+.....+..+++ .++.++.+|++|.+++++++++
T Consensus 11 ~~~~~~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l----~~v~~~~~Dl~d~~~~~~~~~~ 86 (330)
T 2pzm_A 11 SSGLVPRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPV----AGLSVIEGSVTDAGLLERAFDS 86 (330)
T ss_dssp ---CCSTTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSC----TTEEEEECCTTCHHHHHHHHHH
T ss_pred ccCCcccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhcc----CCceEEEeeCCCHHHHHHHHhh
Confidence 456677889999999999999999999999999999999999755322111111 3688999999999999999876
Q ss_pred HHHHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc
Q 025672 83 TINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 162 (249)
Q Consensus 83 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~ 162 (249)
+ ++|+||||||..... +.++++ +++|+.++.++++++... + .++||++||...+..
T Consensus 87 ~-----~~D~vih~A~~~~~~-----~~~~~~--~~~N~~~~~~l~~a~~~~----~--------~~~iV~~SS~~~~~~ 142 (330)
T 2pzm_A 87 F-----KPTHVVHSAAAYKDP-----DDWAED--AATNVQGSINVAKAASKA----G--------VKRLLNFQTALCYGR 142 (330)
T ss_dssp H-----CCSEEEECCCCCSCT-----TCHHHH--HHHHTHHHHHHHHHHHHH----T--------CSEEEEEEEGGGGCS
T ss_pred c-----CCCEEEECCccCCCc-----cccChh--HHHHHHHHHHHHHHHHHc----C--------CCEEEEecCHHHhCC
Confidence 5 699999999975432 345555 999999999999998742 2 278999999876543
Q ss_pred C-----c------cchhhHHHHHHHHHHHHHHHHHhcCCCCeE-EEEEecCccccccccCCCChHHHHHhhhhh---hc-
Q 025672 163 T-----W------YQIHVSAAKAAVDSITRSLALEWGTDYAIR-VNGIAPGPIKDTAGVSKLAPEEIRSKATDY---MA- 226 (249)
Q Consensus 163 ~-----~------~~~~y~~sK~a~~~l~~~la~e~~~~~gi~-v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~---~~- 226 (249)
. + +...|+.+|.+++.+++.+ ++. ...|| ++.+.||. .+. . ...+...+... ..
T Consensus 143 ~~~~~~~~~E~~~~~~~Y~~sK~~~e~~~~~~--~~~-~~~iR~~~v~gp~~-~~~-----~-~~~~~~~~~~~~~~~~~ 212 (330)
T 2pzm_A 143 PATVPIPIDSPTAPFTSYGISKTAGEAFLMMS--DVP-VVSLRLANVTGPRL-AIG-----P-IPTFYKRLKAGQKCFCS 212 (330)
T ss_dssp CSSSSBCTTCCCCCCSHHHHHHHHHHHHHHTC--SSC-EEEEEECEEECTTC-CSS-----H-HHHHHHHHHTTCCCCEE
T ss_pred CccCCCCcCCCCCCCChHHHHHHHHHHHHHHc--CCC-EEEEeeeeeECcCC-CCC-----H-HHHHHHHHHcCCEEeCC
Confidence 3 2 5678999999999999876 332 33455 45555553 111 1 11122211110 00
Q ss_pred --ccCCCCHHHHHH-HHHHhccC
Q 025672 227 --AYKFGEKWDIAM-AALYLASD 246 (249)
Q Consensus 227 --~~~~~~~~dva~-~v~~l~s~ 246 (249)
...+.+++|+|+ ++++++++
T Consensus 213 ~~~~~~i~~~Dva~~a~~~~~~~ 235 (330)
T 2pzm_A 213 DTVRDFLDMSDFLAIADLSLQEG 235 (330)
T ss_dssp SCEECEEEHHHHHHHHHHHTSTT
T ss_pred CCEecceeHHHHHHHHHHHHhhc
Confidence 345778999999 99999975
|
| >1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=1e-23 Score=181.94 Aligned_cols=216 Identities=13% Similarity=0.067 Sum_probs=154.6
Q ss_pred CCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHH-----------------HHHHHHHhcCCCeeEEEccCCC
Q 025672 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLR-----------------SAVAALHSLGIPAIGLEGDVRK 72 (249)
Q Consensus 10 l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~-----------------~~~~~~~~~~~~~~~~~~Dl~~ 72 (249)
.++.++|||||+|+||++++++|+++|++|++++|+..... .+.+.....+.++.++.+|++|
T Consensus 9 ~~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~Dl~d 88 (404)
T 1i24_A 9 HHGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICD 88 (404)
T ss_dssp ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTS
T ss_pred cCCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEEECCCCC
Confidence 46899999999999999999999999999999998654321 1211111224578899999999
Q ss_pred HHHHHHHHHHHHHHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEE
Q 025672 73 REDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIII 152 (249)
Q Consensus 73 ~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv 152 (249)
.++++++++.. ++|+|||+||...... ...+++++...+++|+.++.++++++.+.. . +.+||
T Consensus 89 ~~~~~~~~~~~-----~~D~Vih~A~~~~~~~-~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~----~-------~~~~V 151 (404)
T 1i24_A 89 FEFLAESFKSF-----EPDSVVHFGEQRSAPY-SMIDRSRAVYTQHNNVIGTLNVLFAIKEFG----E-------ECHLV 151 (404)
T ss_dssp HHHHHHHHHHH-----CCSEEEECCSCCCHHH-HTSCHHHHHHHHHHHHHHHHHHHHHHHHHC----T-------TCEEE
T ss_pred HHHHHHHHhcc-----CCCEEEECCCCCCccc-hhhCccchhhhHHHHHHHHHHHHHHHHHhC----C-------CcEEE
Confidence 99999988765 6999999999654221 122566678899999999999999987541 1 14799
Q ss_pred Eeccccccc------------------------cCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccc
Q 025672 153 NISATLHYT------------------------ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAG 208 (249)
Q Consensus 153 ~iss~~~~~------------------------~~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~ 208 (249)
++||...+. +..+...|+.+|.+.+.+++.++.++ |++++.|.||.|.++..
T Consensus 152 ~~SS~~vyg~~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~----gi~~~ivrp~~v~Gp~~ 227 (404)
T 1i24_A 152 KLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW----GIRATDLNQGVVYGVKT 227 (404)
T ss_dssp EECCGGGGCCCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHH----CCEEEEEEECEEECSCC
T ss_pred EeCcHHHhCCCCCCCCccccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHhc----CCeEEEEecceeeCCCC
Confidence 999975432 22345679999999999999998875 59999999999997643
Q ss_pred cC-----------------CCChHHHHHhhhhhhc---------ccCCCCHHHHHHHHHHhccC
Q 025672 209 VS-----------------KLAPEEIRSKATDYMA---------AYKFGEKWDIAMAALYLASD 246 (249)
Q Consensus 209 ~~-----------------~~~~~~~~~~~~~~~~---------~~~~~~~~dva~~v~~l~s~ 246 (249)
.. ......+........+ ...+...+|+|++++.++..
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~~~~l~~ 291 (404)
T 1i24_A 228 DETEMHEELRNRLDYDAVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIAN 291 (404)
T ss_dssp TTGGGSGGGCCCCCCSTTTCCHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHS
T ss_pred CccccccccccccccccchhhHHHHHHHHHHcCCeeEEeCCCCceECcEEHHHHHHHHHHHHhC
Confidence 21 0111233332222211 12245689999999998854
|
| >2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=4.6e-24 Score=179.98 Aligned_cols=209 Identities=14% Similarity=0.063 Sum_probs=148.8
Q ss_pred CCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHH--hcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALH--SLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 10 l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~--~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
+++|++|||||+|+||++++++|+++|++|+++.|+.+..++...... ..+.++.++++|++|.++++++++
T Consensus 3 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------ 76 (337)
T 2c29_D 3 SQSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLADEGSFDEAIK------ 76 (337)
T ss_dssp ---CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHHHHTSTTHHHHEEEEECCTTSTTTTHHHHT------
T ss_pred CCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHHHHHhcccCCCeEEEEEcCCCCHHHHHHHHc------
Confidence 468999999999999999999999999999999998765443322111 111257899999999998887764
Q ss_pred CCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC----
Q 025672 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT---- 163 (249)
Q Consensus 88 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~---- 163 (249)
.+|+|||+|+... .... +.....+++|+.++.++++++.+.. . .++||++||..+..+.
T Consensus 77 -~~d~Vih~A~~~~---~~~~--~~~~~~~~~nv~gt~~ll~a~~~~~---~--------~~riV~~SS~~~~~~~~~~~ 139 (337)
T 2c29_D 77 -GCTGVFHVATPMD---FESK--DPENEVIKPTIEGMLGIMKSCAAAK---T--------VRRLVFTSSAGTVNIQEHQL 139 (337)
T ss_dssp -TCSEEEECCCCCC---SSCS--SHHHHTHHHHHHHHHHHHHHHHHHS---C--------CCEEEEECCGGGTSCSSSCC
T ss_pred -CCCEEEEeccccC---CCCC--ChHHHHHHHHHHHHHHHHHHHHhCC---C--------ccEEEEeeeHhhcccCCCCC
Confidence 5899999998542 1111 2235688999999999999987642 1 1679999998754321
Q ss_pred ------------------ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHh-----
Q 025672 164 ------------------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSK----- 220 (249)
Q Consensus 164 ------------------~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~----- 220 (249)
++...|+.||.+.+.+++.++++. |++++.|.||.+.++........ .....
T Consensus 140 ~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~----gi~~~~lrp~~v~Gp~~~~~~~~-~~~~~~~~~~ 214 (337)
T 2c29_D 140 PVYDESCWSDMEFCRAKKMTAWMYFVSKTLAEQAAWKYAKEN----NIDFITIIPTLVVGPFIMSSMPP-SLITALSPIT 214 (337)
T ss_dssp SEECTTCCCCHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHHH----TCCEEEEEECEEESCCSCSSCCH-HHHHHTHHHH
T ss_pred cccCcccCCchhhhcccCCccchHHHHHHHHHHHHHHHHHHc----CCcEEEEeCCceECCCCCCCCCc-hHHHHHHHHc
Confidence 123469999999999888777543 69999999999998754333221 11111
Q ss_pred ----hhhhhcccCCCCHHHHHHHHHHhccC
Q 025672 221 ----ATDYMAAYKFGEKWDIAMAALYLASD 246 (249)
Q Consensus 221 ----~~~~~~~~~~~~~~dva~~v~~l~s~ 246 (249)
.....+..++..++|+|++++++++.
T Consensus 215 g~~~~~~~~~~~~~i~v~Dva~a~~~~~~~ 244 (337)
T 2c29_D 215 GNEAHYSIIRQGQFVHLDDLCNAHIYLFEN 244 (337)
T ss_dssp TCGGGHHHHTEEEEEEHHHHHHHHHHHHHC
T ss_pred CCCccccccCCCCEEEHHHHHHHHHHHhcC
Confidence 01112234588999999999999864
|
| >2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.1e-24 Score=183.68 Aligned_cols=208 Identities=15% Similarity=0.043 Sum_probs=152.7
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcC--CeEEEEeCCcc--hHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHH
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHG--AAIAIMGRRKT--VLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G--~~v~l~~r~~~--~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 86 (249)
+++++|||||+|+||++++++|+++| ++|++++|+.. ..+.+ +++. .+.++.++.+|++|.+++++++
T Consensus 2 ~~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~-~~~~-~~~~~~~~~~Dl~d~~~~~~~~------ 73 (336)
T 2hun_A 2 HSMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANL-KDLE-DDPRYTFVKGDVADYELVKELV------ 73 (336)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGG-TTTT-TCTTEEEEECCTTCHHHHHHHH------
T ss_pred CCCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHH-hhhc-cCCceEEEEcCCCCHHHHHHHh------
Confidence 35679999999999999999999997 89999998642 22221 1111 1457899999999999988887
Q ss_pred hCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc-----
Q 025672 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT----- 161 (249)
Q Consensus 87 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~----- 161 (249)
+++|+|||+||.... +.+.++++..+++|+.++.++++++.+. . . .++||++||...+.
T Consensus 74 -~~~d~vih~A~~~~~----~~~~~~~~~~~~~Nv~g~~~l~~a~~~~--~-~--------~~~iv~~SS~~vyg~~~~~ 137 (336)
T 2hun_A 74 -RKVDGVVHLAAESHV----DRSISSPEIFLHSNVIGTYTLLESIRRE--N-P--------EVRFVHVSTDEVYGDILKG 137 (336)
T ss_dssp -HTCSEEEECCCCCCH----HHHHHCTHHHHHHHHHHHHHHHHHHHHH--C-T--------TSEEEEEEEGGGGCCCSSS
T ss_pred -hCCCEEEECCCCcCh----hhhhhCHHHHHHHHHHHHHHHHHHHHHh--C-C--------CcEEEEeccHHHHCCCCCC
Confidence 269999999996431 1234567788999999999999999876 1 1 26899999975432
Q ss_pred ------cCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhh--hc-------
Q 025672 162 ------ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDY--MA------- 226 (249)
Q Consensus 162 ------~~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~--~~------- 226 (249)
+..+...|+.+|.+.+.+++.++.++ |++++.+.||.+.++..........+....... .+
T Consensus 138 ~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~----~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (336)
T 2hun_A 138 SFTENDRLMPSSPYSATKAASDMLVLGWTRTY----NLNASITRCTNNYGPYQFPEKLIPKTIIRASLGLKIPIYGTGKN 213 (336)
T ss_dssp CBCTTBCCCCCSHHHHHHHHHHHHHHHHHHHT----TCEEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCEEEETC---
T ss_pred CcCCCCCCCCCCccHHHHHHHHHHHHHHHHHh----CCCEEEEeeeeeeCcCCCcCchHHHHHHHHHcCCCceEeCCCCc
Confidence 23456789999999999999999775 599999999999977543221122233322221 11
Q ss_pred ccCCCCHHHHHHHHHHhccC
Q 025672 227 AYKFGEKWDIAMAALYLASD 246 (249)
Q Consensus 227 ~~~~~~~~dva~~v~~l~s~ 246 (249)
...+..++|+|+++++++++
T Consensus 214 ~~~~i~v~Dva~~~~~~~~~ 233 (336)
T 2hun_A 214 VRDWLYVEDHVRAIELVLLK 233 (336)
T ss_dssp CEEEEEHHHHHHHHHHHHHH
T ss_pred eeeeEEHHHHHHHHHHHHhC
Confidence 23466799999999999864
|
| >1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=1.7e-24 Score=184.20 Aligned_cols=215 Identities=19% Similarity=0.133 Sum_probs=155.7
Q ss_pred EEEEecCCCchhHHHHHHHHHc-CCeEEEEeCCc--chHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCc
Q 025672 14 VALLTGGGSGIGFEISLQLGKH-GAAIAIMGRRK--TVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (249)
Q Consensus 14 ~~lItGa~~giG~~~a~~l~~~-G~~v~l~~r~~--~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 90 (249)
++|||||+|+||++++++|+++ |++|++++|+. ...+.+ .++. .+.++.++.+|++|.+++++++++. ++
T Consensus 2 kvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~-~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~ 74 (361)
T 1kew_A 2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESL-SDIS-ESNRYNFEHADICDSAEITRIFEQY-----QP 74 (361)
T ss_dssp EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGG-TTTT-TCTTEEEEECCTTCHHHHHHHHHHH-----CC
T ss_pred EEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhh-hhhh-cCCCeEEEECCCCCHHHHHHHHhhc-----CC
Confidence 5899999999999999999998 79999999865 222222 1121 1457899999999999999988752 79
Q ss_pred cEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc---------
Q 025672 91 DILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT--------- 161 (249)
Q Consensus 91 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~--------- 161 (249)
|+|||+||.... +.+.++++..+++|+.++.++++++.+.|..-+..+ ..+++||++||...+.
T Consensus 75 d~vih~A~~~~~----~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~---~~~~~iv~~SS~~v~g~~~~~~~~~ 147 (361)
T 1kew_A 75 DAVMHLAAESHV----DRSITGPAAFIETNIVGTYALLEVARKYWSALGEDK---KNNFRFHHISTDEVYGDLPHPDEVE 147 (361)
T ss_dssp SEEEECCSCCCH----HHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHH---HHHCEEEEEEEGGGGCCCCCGGGSC
T ss_pred CEEEECCCCcCh----hhhhhCHHHHHHHHHHHHHHHHHHHHHhccCccccc---ccCceEEEeCCHHHhCCCccccccc
Confidence 999999996431 123456788999999999999999999875311000 0014799999965332
Q ss_pred ------------cCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhh--h--
Q 025672 162 ------------ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDY--M-- 225 (249)
Q Consensus 162 ------------~~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~--~-- 225 (249)
+..+...|+.+|.+.+.+++.++.++ |++++.|.||.+.++..........+....... .
T Consensus 148 ~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~----gi~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~ 223 (361)
T 1kew_A 148 NSVTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTY----GLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPI 223 (361)
T ss_dssp TTSCCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH----CCCEEEEEECEEESTTCCTTSHHHHHHHHHHHTCCEEE
T ss_pred ccccCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHh----CCcEEEEeeceeECCCCCcccHHHHHHHHHHcCCCceE
Confidence 12346789999999999999999876 599999999999987643221122333322221 1
Q ss_pred -----cccCCCCHHHHHHHHHHhccC
Q 025672 226 -----AAYKFGEKWDIAMAALYLASD 246 (249)
Q Consensus 226 -----~~~~~~~~~dva~~v~~l~s~ 246 (249)
+...+.+++|+|+++++++++
T Consensus 224 ~~~~~~~~~~i~v~Dva~a~~~~~~~ 249 (361)
T 1kew_A 224 YGKGDQIRDWLYVEDHARALHMVVTE 249 (361)
T ss_dssp ETTSCCEEEEEEHHHHHHHHHHHHHH
T ss_pred cCCCceeEeeEEHHHHHHHHHHHHhC
Confidence 123466899999999999864
|
| >3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.4e-24 Score=172.38 Aligned_cols=179 Identities=14% Similarity=0.115 Sum_probs=143.3
Q ss_pred EEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCC-HHHHHHHHHHHHHHhCCccE
Q 025672 14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK-REDAVRVVESTINHFGKLDI 92 (249)
Q Consensus 14 ~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~id~ 92 (249)
+++||||+|+||++++++|+++|++|++++|+.++.+.. .++.++++|++| .++++++++ .+|+
T Consensus 2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~--------~~~~~~~~D~~d~~~~~~~~~~-------~~d~ 66 (219)
T 3dqp_A 2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY--------NNVKAVHFDVDWTPEEMAKQLH-------GMDA 66 (219)
T ss_dssp EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC--------TTEEEEECCTTSCHHHHHTTTT-------TCSE
T ss_pred eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc--------CCceEEEecccCCHHHHHHHHc-------CCCE
Confidence 689999999999999999999999999999998754322 478999999999 888877764 6999
Q ss_pred EEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCcc-------
Q 025672 93 LVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY------- 165 (249)
Q Consensus 93 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~------- 165 (249)
||||+|.... ..+++|+.++.++++++. +.+ .++||++||..+..+.+.
T Consensus 67 vi~~ag~~~~------------~~~~~n~~~~~~l~~a~~----~~~--------~~~iv~~SS~~~~~~~~~~e~~~~~ 122 (219)
T 3dqp_A 67 IINVSGSGGK------------SLLKVDLYGAVKLMQAAE----KAE--------VKRFILLSTIFSLQPEKWIGAGFDA 122 (219)
T ss_dssp EEECCCCTTS------------SCCCCCCHHHHHHHHHHH----HTT--------CCEEEEECCTTTTCGGGCCSHHHHH
T ss_pred EEECCcCCCC------------CcEeEeHHHHHHHHHHHH----HhC--------CCEEEEECcccccCCCccccccccc
Confidence 9999997541 267899999999988874 222 268999999887766555
Q ss_pred chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhcc
Q 025672 166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245 (249)
Q Consensus 166 ~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s 245 (249)
...|+.+|.+.+.+++ . ..|++++.|.||++.++........ ......+.+++|+|++++++++
T Consensus 123 ~~~Y~~sK~~~e~~~~------~-~~~i~~~ilrp~~v~g~~~~~~~~~---------~~~~~~~i~~~Dva~~i~~~l~ 186 (219)
T 3dqp_A 123 LKDYYIAKHFADLYLT------K-ETNLDYTIIQPGALTEEEATGLIDI---------NDEVSASNTIGDVADTIKELVM 186 (219)
T ss_dssp THHHHHHHHHHHHHHH------H-SCCCEEEEEEECSEECSCCCSEEEE---------SSSCCCCEEHHHHHHHHHHHHT
T ss_pred ccHHHHHHHHHHHHHH------h-ccCCcEEEEeCceEecCCCCCcccc---------CCCcCCcccHHHHHHHHHHHHh
Confidence 7789999999998887 2 5689999999999987643322210 1234567789999999999997
Q ss_pred CC
Q 025672 246 DA 247 (249)
Q Consensus 246 ~~ 247 (249)
+.
T Consensus 187 ~~ 188 (219)
T 3dqp_A 187 TD 188 (219)
T ss_dssp CG
T ss_pred Cc
Confidence 64
|
| >4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A | Back alignment and structure |
|---|
Probab=99.92 E-value=5.1e-24 Score=178.97 Aligned_cols=222 Identities=17% Similarity=0.073 Sum_probs=161.5
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHH-HcCCeEEEEeCCcch------------HHHHHHHHHhcCCCeeEEEccCCCHH
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLG-KHGAAIAIMGRRKTV------------LRSAVAALHSLGIPAIGLEGDVRKRE 74 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~-~~G~~v~l~~r~~~~------------~~~~~~~~~~~~~~~~~~~~Dl~~~~ 74 (249)
....+|++|||||++|||++.+..|+ ..|++++++.+..+. .+...+++++.|.+...+.||+++++
T Consensus 46 ~~~~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~e 125 (401)
T 4ggo_A 46 GAKAPKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSDE 125 (401)
T ss_dssp TSCCCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSHH
T ss_pred ccCCCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCHH
Confidence 34678999999999999999999999 689999998876542 34566777788999999999999999
Q ss_pred HHHHHHHHHHHHhCCccEEEEcCCCCCC-------------CCC---------------------CCCCHHHHHH---HH
Q 025672 75 DAVRVVESTINHFGKLDILVNAAAGNFL-------------VPA---------------------EDLSPNGFRT---VI 117 (249)
Q Consensus 75 ~~~~~~~~~~~~~~~id~vi~~ag~~~~-------------~~~---------------------~~~~~~~~~~---~~ 117 (249)
+++++++++.+.+|+||+|||+++.... +|+ ...+.++++. .|
T Consensus 126 ~i~~vi~~i~~~~G~IDiLVhS~A~~~r~~p~~g~~~~S~LKpi~~~~~~~~ldt~~~~i~~~~l~pat~eeie~T~~vM 205 (401)
T 4ggo_A 126 IKAQVIEEAKKKGIKFDLIVYSLASPVRTDPDTGIMHKSVLKPFGKTFTGKTVDPFTGELKEISAEPANDEEAAATVKVM 205 (401)
T ss_dssp HHHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEECTTTCCEEEEEECCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCEEEEecccccccCCCCCceeeeeecccccccccccccccccccccccccCCcHHHHHHHHHHH
Confidence 9999999999999999999999997531 111 1234455544 44
Q ss_pred hhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccc--hhhHHHHHHHHHHHHHHHHHhcCCCCeEE
Q 025672 118 EIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ--IHVSAAKAAVDSITRSLALEWGTDYAIRV 195 (249)
Q Consensus 118 ~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~--~~y~~sK~a~~~l~~~la~e~~~~~gi~v 195 (249)
....++.|...+...+.|.+ +++++.+|+..+....|.+ ..++.+|++|+..++.|+.+++ ++++
T Consensus 206 g~s~~s~w~~al~~a~lla~----------G~siva~SYiGse~t~P~Y~~G~mG~AKaaLEa~~r~La~eL~---~~~a 272 (401)
T 4ggo_A 206 GGEDWERWIKQLSKEGLLEE----------GCITLAYSYIGPEATQALYRKGTIGKAKEHLEATAHRLNKENP---SIRA 272 (401)
T ss_dssp SSHHHHHHHHHHHHTTCEEE----------EEEEEEEECCCCGGGHHHHTTSHHHHHHHHHHHHHHHHHHHCT---TEEE
T ss_pred hhhHHHHHHHHHHhhhcccC----------CceEEEEeccCcceeecCCCccHHHHHHHHHHHHHHHHHHhcC---CCcE
Confidence 45566666666666666644 4889999998776655543 4789999999999999999997 4899
Q ss_pred EEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhc
Q 025672 196 NGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLA 244 (249)
Q Consensus 196 ~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~ 244 (249)
+.++||.+.|.....-+.-+-....+.+ -++..++-|...+.+..|.
T Consensus 273 ~v~v~~a~vT~AssaIP~~ply~~~l~k--vmk~~g~heg~ieq~~rl~ 319 (401)
T 4ggo_A 273 FVSVNKGLVTRASAVIPVIPLYLASLFK--VMKEKGNHEGCIEQITRLY 319 (401)
T ss_dssp EEEECCCCCCTTGGGSSSHHHHHHHHHH--HHHHHTCCCCHHHHHHHHH
T ss_pred EEEEcCccccchhhcCCCchHHHHHHHH--HHHhcCCCCchHHHHHHHH
Confidence 9999999997644333322221111111 1233445555555555554
|
| >1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=1.4e-24 Score=175.51 Aligned_cols=202 Identities=13% Similarity=0.011 Sum_probs=145.1
Q ss_pred CCCcEEEEecCCCchhHHHHHHHHHc--CCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 10 LKGKVALLTGGGSGIGFEISLQLGKH--GAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 10 l~~k~~lItGa~~giG~~~a~~l~~~--G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
+++|+++||||+|+||++++++|+++ |++|++++|+.++.+.+ +.++.++.+|++|.++++++++
T Consensus 2 ~~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~-------~~~~~~~~~D~~d~~~~~~~~~------ 68 (253)
T 1xq6_A 2 ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI-------GGEADVFIGDITDADSINPAFQ------ 68 (253)
T ss_dssp CSCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHT-------TCCTTEEECCTTSHHHHHHHHT------
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhc-------CCCeeEEEecCCCHHHHHHHHc------
Confidence 35789999999999999999999999 89999999987654332 3467899999999999888875
Q ss_pred CCccEEEEcCCCCCCCCC---------CCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccc
Q 025672 88 GKLDILVNAAAGNFLVPA---------EDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL 158 (249)
Q Consensus 88 ~~id~vi~~ag~~~~~~~---------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~ 158 (249)
.+|+||||+|....... .+...+++...+++|+.++.++++++.+. + .++||++||..
T Consensus 69 -~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~--------~~~iv~~SS~~ 135 (253)
T 1xq6_A 69 -GIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVA----G--------VKHIVVVGSMG 135 (253)
T ss_dssp -TCSEEEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHH----T--------CSEEEEEEETT
T ss_pred -CCCEEEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHc----C--------CCEEEEEcCcc
Confidence 58999999997542211 12223445577899999999998887643 2 16799999987
Q ss_pred ccccCccchh-----hHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCH
Q 025672 159 HYTATWYQIH-----VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEK 233 (249)
Q Consensus 159 ~~~~~~~~~~-----y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (249)
+..+..+... |+.+|.+++.+++ ..|++++.|.||++.++..............+. ....++.++
T Consensus 136 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~--------~~~i~~~~vrpg~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 205 (253)
T 1xq6_A 136 GTNPDHPLNKLGNGNILVWKRKAEQYLA--------DSGTPYTIIRAGGLLDKEGGVRELLVGKDDELL--QTDTKTVPR 205 (253)
T ss_dssp TTCTTCGGGGGGGCCHHHHHHHHHHHHH--------TSSSCEEEEEECEEECSCSSSSCEEEESTTGGG--GSSCCEEEH
T ss_pred CCCCCCccccccchhHHHHHHHHHHHHH--------hCCCceEEEecceeecCCcchhhhhccCCcCCc--CCCCcEEcH
Confidence 7654433333 5568998887764 357999999999999764321100000000011 112356789
Q ss_pred HHHHHHHHHhccCC
Q 025672 234 WDIAMAALYLASDA 247 (249)
Q Consensus 234 ~dva~~v~~l~s~~ 247 (249)
+|+|+++++++++.
T Consensus 206 ~Dva~~~~~~~~~~ 219 (253)
T 1xq6_A 206 ADVAEVCIQALLFE 219 (253)
T ss_dssp HHHHHHHHHHTTCG
T ss_pred HHHHHHHHHHHcCc
Confidence 99999999999753
|
| >1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=7.8e-24 Score=179.69 Aligned_cols=210 Identities=15% Similarity=0.009 Sum_probs=156.5
Q ss_pred CCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcch----HHHHHHHHHhc-CCCeeEEEccCCCHHHHHHHHHHHH
Q 025672 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTV----LRSAVAALHSL-GIPAIGLEGDVRKREDAVRVVESTI 84 (249)
Q Consensus 10 l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~----~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~ 84 (249)
++++++|||||+|+||++++++|+++|++|++++|+... ++.+.+++... +.++.++.+|++|.++++++++
T Consensus 25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--- 101 (352)
T 1sb8_A 25 AQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACA--- 101 (352)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHT---
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhc---
Confidence 567899999999999999999999999999999997642 33333322111 2578899999999999888775
Q ss_pred HHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCc
Q 025672 85 NHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW 164 (249)
Q Consensus 85 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~ 164 (249)
++|+|||+||..... .+.++++..+++|+.++.++++++.+. + .++||++||...+.+.+
T Consensus 102 ----~~d~vih~A~~~~~~----~~~~~~~~~~~~n~~~~~~l~~a~~~~----~--------~~~~v~~SS~~~~~~~~ 161 (352)
T 1sb8_A 102 ----GVDYVLHQAALGSVP----RSINDPITSNATNIDGFLNMLIAARDA----K--------VQSFTYAASSSTYGDHP 161 (352)
T ss_dssp ----TCSEEEECCSCCCHH----HHHHCHHHHHHHHTHHHHHHHHHHHHT----T--------CSEEEEEEEGGGGTTCC
T ss_pred ----CCCEEEECCcccCch----hhhhCHHHHHHHHHHHHHHHHHHHHHc----C--------CCEEEEeccHHhcCCCC
Confidence 699999999964311 134567889999999999999988752 2 26799999987654432
Q ss_pred -----------cchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCC----CChHHHHHhhhhhhc---
Q 025672 165 -----------YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK----LAPEEIRSKATDYMA--- 226 (249)
Q Consensus 165 -----------~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~----~~~~~~~~~~~~~~~--- 226 (249)
+...|+.+|.+.+.+++.++.++ |++++.|.||.+.++..... .....+........+
T Consensus 162 ~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~----g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (352)
T 1sb8_A 162 GLPKVEDTIGKPLSPYAVTKYVNELYADVFSRCY----GFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYI 237 (352)
T ss_dssp CSSBCTTCCCCCCSHHHHHHHHHHHHHHHHHHHH----CCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEE
T ss_pred CCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHc----CCCEEEEEECceeCcCCCCCcchhhHHHHHHHHHHCCCCcEE
Confidence 35689999999999999999875 59999999999997654322 111223332222222
Q ss_pred ------ccCCCCHHHHHHHHHHhccC
Q 025672 227 ------AYKFGEKWDIAMAALYLASD 246 (249)
Q Consensus 227 ------~~~~~~~~dva~~v~~l~s~ 246 (249)
...+..++|+|+++++++..
T Consensus 238 ~g~g~~~~~~i~v~Dva~a~~~~~~~ 263 (352)
T 1sb8_A 238 NGDGETSRDFCYIENTVQANLLAATA 263 (352)
T ss_dssp ESSSCCEECCEEHHHHHHHHHHHHTC
T ss_pred eCCCCceEeeEEHHHHHHHHHHHHhc
Confidence 12466799999999998864
|
| >2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=6.9e-24 Score=179.09 Aligned_cols=214 Identities=18% Similarity=0.134 Sum_probs=151.9
Q ss_pred CCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHH-HHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhC
Q 025672 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRS-AVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (249)
Q Consensus 10 l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~-~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 88 (249)
|++|++|||||+|+||++++++|+++|++|++++|+.+..+. ..+.+. .+.++.++.+|++|.++++++++.+
T Consensus 1 m~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~----- 74 (345)
T 2z1m_A 1 MSGKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFASWRLKELG-IENDVKIIHMDLLEFSNIIRTIEKV----- 74 (345)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTTHHHHHTT-CTTTEEECCCCTTCHHHHHHHHHHH-----
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccccccHhhcc-ccCceeEEECCCCCHHHHHHHHHhc-----
Confidence 357899999999999999999999999999999998765431 112221 1346889999999999999998866
Q ss_pred CccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccc--------
Q 025672 89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY-------- 160 (249)
Q Consensus 89 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~-------- 160 (249)
++|+|||+||.... +.+.++++..+++|+.++.++++++.+. .. .++||++||...+
T Consensus 75 ~~d~vih~A~~~~~----~~~~~~~~~~~~~Nv~g~~~l~~a~~~~-~~----------~~~iv~~SS~~vyg~~~~~~~ 139 (345)
T 2z1m_A 75 QPDEVYNLAAQSFV----GVSFEQPILTAEVDAIGVLRILEALRTV-KP----------DTKFYQASTSEMFGKVQEIPQ 139 (345)
T ss_dssp CCSEEEECCCCCCH----HHHTTSHHHHHHHHTHHHHHHHHHHHHH-CT----------TCEEEEEEEGGGGCSCSSSSB
T ss_pred CCCEEEECCCCcch----hhhhhCHHHHHHHHHHHHHHHHHHHHHh-CC----------CceEEEEechhhcCCCCCCCC
Confidence 69999999996431 1224567889999999999999999853 11 1679999998543
Q ss_pred ---ccCccchhhHHHHHHHHHHHHHHHHHhcC--CCCeEEEEEecCccccccccCCCChHHHHHhh-hh--------hhc
Q 025672 161 ---TATWYQIHVSAAKAAVDSITRSLALEWGT--DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKA-TD--------YMA 226 (249)
Q Consensus 161 ---~~~~~~~~y~~sK~a~~~l~~~la~e~~~--~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~-~~--------~~~ 226 (249)
.+..+...|+.+|.+.+.+++.++.+++- ..+++++.+.||...+.... .. ..+.... .. ..+
T Consensus 140 ~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gpg~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~ 216 (345)
T 2z1m_A 140 TEKTPFYPRSPYAVAKLFGHWITVNYREAYNMFACSGILFNHESPLRGIEFVTR-KI--TYSLARIKYGLQDKLVLGNLN 216 (345)
T ss_dssp CTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHH-HH--HHHHHHHHTTSCSCEEESCTT
T ss_pred CccCCCCCCChhHHHHHHHHHHHHHHHHHhCCceEeeeeeeecCCCCCCcchhH-HH--HHHHHHHHcCCCCeeeeCCCC
Confidence 23345678999999999999999988641 12455666778776543210 00 0111111 11 011
Q ss_pred ccC-CCCHHHHHHHHHHhccCC
Q 025672 227 AYK-FGEKWDIAMAALYLASDA 247 (249)
Q Consensus 227 ~~~-~~~~~dva~~v~~l~s~~ 247 (249)
..+ +.+++|+|+++.+++++.
T Consensus 217 ~~~~~~~v~Dva~a~~~~~~~~ 238 (345)
T 2z1m_A 217 AKRDWGYAPEYVEAMWLMMQQP 238 (345)
T ss_dssp CEECCEEHHHHHHHHHHHHTSS
T ss_pred ceeeeEEHHHHHHHHHHHHhCC
Confidence 122 778999999999999753
|
| >3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=99.92 E-value=3.8e-24 Score=182.31 Aligned_cols=211 Identities=15% Similarity=0.083 Sum_probs=149.2
Q ss_pred CCCCCCcEEEEecCCCchhHHHHHHHHH--cCCeEEEEeCCcchHHHHH-------HHHHhcCCCeeEEEccCCCHHHHH
Q 025672 7 GDILKGKVALLTGGGSGIGFEISLQLGK--HGAAIAIMGRRKTVLRSAV-------AALHSLGIPAIGLEGDVRKREDAV 77 (249)
Q Consensus 7 ~~~l~~k~~lItGa~~giG~~~a~~l~~--~G~~v~l~~r~~~~~~~~~-------~~~~~~~~~~~~~~~Dl~~~~~~~ 77 (249)
.+.+++|++|||||+|+||++++++|++ +|++|++++|+........ ......+.++.++.+|++|+++++
T Consensus 5 ~~~~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~ 84 (362)
T 3sxp_A 5 DDELENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLR 84 (362)
T ss_dssp SCCCTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHH
T ss_pred chhcCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHH
Confidence 3568899999999999999999999999 9999999999765211100 001112446789999999999988
Q ss_pred HHHHHHHHHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccc
Q 025672 78 RVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISAT 157 (249)
Q Consensus 78 ~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~ 157 (249)
.+ ...++|+|||+||.... +.++++..+++|+.++.++++++.. . +++||++||.
T Consensus 85 ~~------~~~~~D~vih~A~~~~~------~~~~~~~~~~~Nv~gt~~ll~aa~~----~---------~~~~V~~SS~ 139 (362)
T 3sxp_A 85 RL------EKLHFDYLFHQAAVSDT------TMLNQELVMKTNYQAFLNLLEIARS----K---------KAKVIYASSA 139 (362)
T ss_dssp HH------TTSCCSEEEECCCCCGG------GCCCHHHHHHHHTHHHHHHHHHHHH----T---------TCEEEEEEEG
T ss_pred Hh------hccCCCEEEECCccCCc------cccCHHHHHHHHHHHHHHHHHHHHH----c---------CCcEEEeCcH
Confidence 87 23589999999995432 3456788999999999999998842 2 2559999996
Q ss_pred cccccC----------ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCC----CChHHHHHhhhh
Q 025672 158 LHYTAT----------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK----LAPEEIRSKATD 223 (249)
Q Consensus 158 ~~~~~~----------~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~----~~~~~~~~~~~~ 223 (249)
..+... .+...|+.+|.+.+.+++.++.+ +++..|.|+.+..+..... .....+......
T Consensus 140 ~vyg~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~------~~~~~lR~~~v~Gp~~~~~~~~~~~~~~~~~~~~~ 213 (362)
T 3sxp_A 140 GVYGNTKAPNVVGKNESPENVYGFSKLCMDEFVLSHSND------NVQVGLRYFNVYGPREFYKEKTASMVLQLALGAMA 213 (362)
T ss_dssp GGGCSCCSSBCTTSCCCCSSHHHHHHHHHHHHHHHTTTT------SCEEEEEECSEESTTCGGGGGGSCHHHHHHHHHHT
T ss_pred HHhCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHhcc------CCEEEEEeCceeCcCCCCCCcchhHHHHHHHHHHh
Confidence 543321 22456999999999999877643 6777788887775543221 112233333332
Q ss_pred hhcc---------cCCCCHHHHHHHHHHhccCCC
Q 025672 224 YMAA---------YKFGEKWDIAMAALYLASDAG 248 (249)
Q Consensus 224 ~~~~---------~~~~~~~dva~~v~~l~s~~a 248 (249)
..+. ..+..++|+|++++++++...
T Consensus 214 ~~~~~~~~~g~~~~~~i~v~Dva~ai~~~~~~~~ 247 (362)
T 3sxp_A 214 FKEVKLFEFGEQLRDFVYIEDVIQANVKAMKAQK 247 (362)
T ss_dssp TSEEECSGGGCCEEECEEHHHHHHHHHHHTTCSS
T ss_pred CCCeEEECCCCeEEccEEHHHHHHHHHHHHhcCC
Confidence 2221 235569999999999997653
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.91 E-value=1e-23 Score=177.98 Aligned_cols=198 Identities=11% Similarity=0.036 Sum_probs=144.8
Q ss_pred CcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCcc
Q 025672 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD 91 (249)
Q Consensus 12 ~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 91 (249)
.+++|||||+|+||++++++|+++|++|++++|+....+.+ .. .++.++.+|++|.++++++++ .+|
T Consensus 13 ~M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l----~~--~~~~~~~~Dl~d~~~~~~~~~-------~~d 79 (342)
T 2x4g_A 13 HVKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRL----AY--LEPECRVAEMLDHAGLERALR-------GLD 79 (342)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGG----GG--GCCEEEECCTTCHHHHHHHTT-------TCS
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhh----cc--CCeEEEEecCCCHHHHHHHHc-------CCC
Confidence 35899999999999999999999999999999987654332 11 267899999999998887765 589
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCcc------
Q 025672 92 ILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY------ 165 (249)
Q Consensus 92 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~------ 165 (249)
+|||+||... ...+++...+++|+.++.++++++.+. + .++||++||...+...+.
T Consensus 80 ~vih~a~~~~------~~~~~~~~~~~~n~~~~~~l~~a~~~~----~--------~~~~v~~SS~~~~~~~~~~~~~~E 141 (342)
T 2x4g_A 80 GVIFSAGYYP------SRPRRWQEEVASALGQTNPFYAACLQA----R--------VPRILYVGSAYAMPRHPQGLPGHE 141 (342)
T ss_dssp EEEEC------------------CHHHHHHHHHHHHHHHHHHH----T--------CSCEEEECCGGGSCCCTTSSCBCT
T ss_pred EEEECCccCc------CCCCCHHHHHHHHHHHHHHHHHHHHHc----C--------CCeEEEECCHHhhCcCCCCCCCCC
Confidence 9999999543 234567888999999999999999864 1 166999999877654433
Q ss_pred ----------chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccc-cCCCChHHHHHhhhhhhc------cc
Q 025672 166 ----------QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAG-VSKLAPEEIRSKATDYMA------AY 228 (249)
Q Consensus 166 ----------~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~-~~~~~~~~~~~~~~~~~~------~~ 228 (249)
...|+.+|.+.+.+++.++. . |++++.|.||++.++.. ... . ..+...+....+ ..
T Consensus 142 ~~~~~p~~~~~~~Y~~sK~~~e~~~~~~~~----~-g~~~~ilrp~~v~g~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~ 214 (342)
T 2x4g_A 142 GLFYDSLPSGKSSYVLCKWALDEQAREQAR----N-GLPVVIGIPGMVLGELDIGPT-T-GRVITAIGNGEMTHYVAGQR 214 (342)
T ss_dssp TCCCSSCCTTSCHHHHHHHHHHHHHHHHHH----T-TCCEEEEEECEEECSCCSSCS-T-THHHHHHHTTCCCEEECCEE
T ss_pred CCCCCccccccChHHHHHHHHHHHHHHHhh----c-CCcEEEEeCCceECCCCcccc-H-HHHHHHHHcCCCccccCCCc
Confidence 66899999999999999875 4 79999999999997654 212 2 223332222211 12
Q ss_pred CCCCHHHHHHHHHHhccCC
Q 025672 229 KFGEKWDIAMAALYLASDA 247 (249)
Q Consensus 229 ~~~~~~dva~~v~~l~s~~ 247 (249)
.+.+++|+|+++.++++..
T Consensus 215 ~~i~v~Dva~~~~~~~~~~ 233 (342)
T 2x4g_A 215 NVIDAAEAGRGLLMALERG 233 (342)
T ss_dssp EEEEHHHHHHHHHHHHHHS
T ss_pred ceeeHHHHHHHHHHHHhCC
Confidence 2668999999999998653
|
| >4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=2.4e-23 Score=176.17 Aligned_cols=160 Identities=12% Similarity=0.052 Sum_probs=126.6
Q ss_pred CCCCCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHH
Q 025672 4 PFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVEST 83 (249)
Q Consensus 4 ~~~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 83 (249)
+.+..++++|++|||||+|+||++++++|+++|++|++++|+... .++.++.+|++|.+++.++++
T Consensus 11 ~~~~~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~------------~~~~~~~~Dl~d~~~~~~~~~-- 76 (347)
T 4id9_A 11 SSGLVPRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG------------TGGEEVVGSLEDGQALSDAIM-- 76 (347)
T ss_dssp ----------CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS------------SCCSEEESCTTCHHHHHHHHT--
T ss_pred CCcccccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC------------CCccEEecCcCCHHHHHHHHh--
Confidence 345566889999999999999999999999999999999998764 468899999999999888775
Q ss_pred HHHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc-
Q 025672 84 INHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA- 162 (249)
Q Consensus 84 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~- 162 (249)
.+|+|||+|+... .+...++..+++|+.++.++++++.. .+ .++||++||...+..
T Consensus 77 -----~~d~vih~A~~~~------~~~~~~~~~~~~nv~~~~~ll~a~~~----~~--------~~~~V~~SS~~vyg~~ 133 (347)
T 4id9_A 77 -----GVSAVLHLGAFMS------WAPADRDRMFAVNVEGTRRLLDAASA----AG--------VRRFVFASSGEVYPEN 133 (347)
T ss_dssp -----TCSEEEECCCCCC------SSGGGHHHHHHHHTHHHHHHHHHHHH----TT--------CSEEEEEEEGGGTTTT
T ss_pred -----CCCEEEECCcccC------cchhhHHHHHHHHHHHHHHHHHHHHH----cC--------CCeEEEECCHHHhCCC
Confidence 6999999999643 34455689999999999999998854 22 268999999654432
Q ss_pred ------------CccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccc
Q 025672 163 ------------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK 204 (249)
Q Consensus 163 ------------~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~ 204 (249)
..+...|+.+|.+.+.+++.++.+. |++++.+.|+++.
T Consensus 134 ~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~----~~~~~ilRp~~v~ 183 (347)
T 4id9_A 134 RPEFLPVTEDHPLCPNSPYGLTKLLGEELVRFHQRSG----AMETVILRFSHTQ 183 (347)
T ss_dssp SCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHS----SSEEEEEEECEEE
T ss_pred CCCCCCcCCCCCCCCCChHHHHHHHHHHHHHHHHHhc----CCceEEEccceEe
Confidence 2356789999999999999998763 6999999999998
|
| >3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=99.91 E-value=1.7e-23 Score=168.19 Aligned_cols=177 Identities=12% Similarity=0.069 Sum_probs=125.5
Q ss_pred CCCcEEEEecCCCchhHHHHHHHHHcC-CeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhC
Q 025672 10 LKGKVALLTGGGSGIGFEISLQLGKHG-AAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (249)
Q Consensus 10 l~~k~~lItGa~~giG~~~a~~l~~~G-~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 88 (249)
+..|++|||||+|+||++++++|+++| ++|++++|+.++++.+ ....+.++++|++|+++++++++
T Consensus 21 ~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~------~~~~~~~~~~Dl~d~~~~~~~~~------- 87 (236)
T 3qvo_A 21 GHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKP------YPTNSQIIMGDVLNHAALKQAMQ------- 87 (236)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSS------CCTTEEEEECCTTCHHHHHHHHT-------
T ss_pred CcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhccc------ccCCcEEEEecCCCHHHHHHHhc-------
Confidence 445899999999999999999999999 8999999998764321 23478999999999999988876
Q ss_pred CccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccc--
Q 025672 89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ-- 166 (249)
Q Consensus 89 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~-- 166 (249)
.+|+||||+|.. +. ...++.+++.+.+.+. ++||++||...+.+.+..
T Consensus 88 ~~D~vv~~a~~~--------~~--------------~~~~~~~~~~~~~~~~--------~~iV~iSS~~~~~~~~~~~~ 137 (236)
T 3qvo_A 88 GQDIVYANLTGE--------DL--------------DIQANSVIAAMKACDV--------KRLIFVLSLGIYDEVPGKFV 137 (236)
T ss_dssp TCSEEEEECCST--------TH--------------HHHHHHHHHHHHHTTC--------CEEEEECCCCC---------
T ss_pred CCCEEEEcCCCC--------ch--------------hHHHHHHHHHHHHcCC--------CEEEEEecceecCCCCcccc
Confidence 589999999841 11 1235677888877653 789999998776554332
Q ss_pred -----------hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhc-ccCCCCHH
Q 025672 167 -----------IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMA-AYKFGEKW 234 (249)
Q Consensus 167 -----------~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 234 (249)
..|..+| ..+. +.||+++.|.||++.++..... .......+ .+++.+++
T Consensus 138 ~~~~~~~~~~~~~~~~~~-----------~~l~-~~gi~~~~vrPg~i~~~~~~~~-------~~~~~~~~~~~~~i~~~ 198 (236)
T 3qvo_A 138 EWNNAVIGEPLKPFRRAA-----------DAIE-ASGLEYTILRPAWLTDEDIIDY-------ELTSRNEPFKGTIVSRK 198 (236)
T ss_dssp -------CGGGHHHHHHH-----------HHHH-TSCSEEEEEEECEEECCSCCCC-------EEECTTSCCSCSEEEHH
T ss_pred cchhhcccchHHHHHHHH-----------HHHH-HCCCCEEEEeCCcccCCCCcce-------EEeccCCCCCCcEECHH
Confidence 2232222 2334 6799999999999986543211 01111122 35678999
Q ss_pred HHHHHHHHhccCCC
Q 025672 235 DIAMAALYLASDAG 248 (249)
Q Consensus 235 dva~~v~~l~s~~a 248 (249)
|+|++++||+++.+
T Consensus 199 DvA~~i~~ll~~~~ 212 (236)
T 3qvo_A 199 SVAALITDIIDKPE 212 (236)
T ss_dssp HHHHHHHHHHHSTT
T ss_pred HHHHHHHHHHcCcc
Confidence 99999999998765
|
| >3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=3.2e-23 Score=175.70 Aligned_cols=212 Identities=14% Similarity=0.029 Sum_probs=158.5
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcC-----CCeeEEEccCCCHHHHHHHHHH
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG-----IPAIGLEGDVRKREDAVRVVES 82 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~-----~~~~~~~~Dl~~~~~~~~~~~~ 82 (249)
+.+++|++|||||+|+||++++++|+++|++|++++|+..........+.... .++.++.+|++|.+++.++++
T Consensus 21 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~- 99 (351)
T 3ruf_A 21 LIFSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMK- 99 (351)
T ss_dssp HHHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTT-
T ss_pred CCCCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhc-
Confidence 44678999999999999999999999999999999998765554444443321 578999999999999888775
Q ss_pred HHHHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc
Q 025672 83 TINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 162 (249)
Q Consensus 83 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~ 162 (249)
.+|+|||+||.... ....+++...+++|+.++.++++++... +. .+||++||...+..
T Consensus 100 ------~~d~Vih~A~~~~~----~~~~~~~~~~~~~nv~~~~~ll~a~~~~----~~--------~~~v~~SS~~vyg~ 157 (351)
T 3ruf_A 100 ------GVDHVLHQAALGSV----PRSIVDPITTNATNITGFLNILHAAKNA----QV--------QSFTYAASSSTYGD 157 (351)
T ss_dssp ------TCSEEEECCCCCCH----HHHHHCHHHHHHHHTHHHHHHHHHHHHT----TC--------SEEEEEEEGGGGTT
T ss_pred ------CCCEEEECCccCCc----chhhhCHHHHHHHHHHHHHHHHHHHHHc----CC--------CEEEEEecHHhcCC
Confidence 69999999996432 1234557788999999999999988643 21 57999999866533
Q ss_pred C-----------ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCC----CChHHHHHhhhhhhcc
Q 025672 163 T-----------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK----LAPEEIRSKATDYMAA 227 (249)
Q Consensus 163 ~-----------~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~----~~~~~~~~~~~~~~~~ 227 (249)
. .+...|+.+|.+.+.+++.++.++ |++++.+.||.+..+..... .....+........+.
T Consensus 158 ~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~----g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (351)
T 3ruf_A 158 HPALPKVEENIGNPLSPYAVTKYVNEIYAQVYARTY----GFKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDV 233 (351)
T ss_dssp CCCSSBCTTCCCCCCSHHHHHHHHHHHHHHHHHHHH----CCCCEEEEECSEESTTCCCCSTTCCHHHHHHHHHHHTCCC
T ss_pred CCCCCCccCCCCCCCChhHHHHHHHHHHHHHHHHHh----CCCEEEEeeCceeCcCCCCCcchhhHHHHHHHHHHcCCCc
Confidence 2 224689999999999999998875 59999999999997654332 1122333333322221
Q ss_pred ---------cCCCCHHHHHHHHHHhccC
Q 025672 228 ---------YKFGEKWDIAMAALYLASD 246 (249)
Q Consensus 228 ---------~~~~~~~dva~~v~~l~s~ 246 (249)
..+...+|+|+++++++..
T Consensus 234 ~~~g~g~~~~~~i~v~Dva~a~~~~~~~ 261 (351)
T 3ruf_A 234 YINGDGETSRDFCYIDNVIQMNILSALA 261 (351)
T ss_dssp EEESSSCCEECCEEHHHHHHHHHHHHTC
T ss_pred EEeCCCCeEEeeEEHHHHHHHHHHHHhh
Confidence 1245689999999998764
|
| >4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.91 E-value=3.5e-23 Score=175.17 Aligned_cols=212 Identities=15% Similarity=0.050 Sum_probs=149.4
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcC--CeEEEEeCCcch--HHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHH
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHG--AAIAIMGRRKTV--LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTI 84 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G--~~v~l~~r~~~~--~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 84 (249)
.++++++|||||+|+||++++++|+++| ++|+..+|+... .+.+. .+ ....++.++.+|++|.++++++++..
T Consensus 21 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l~-~~-~~~~~~~~~~~Dl~d~~~~~~~~~~~- 97 (346)
T 4egb_A 21 QSNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVK-SI-QDHPNYYFVKGEIQNGELLEHVIKER- 97 (346)
T ss_dssp ---CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGGGT-TT-TTCTTEEEEECCTTCHHHHHHHHHHH-
T ss_pred ccCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccchhhhh-hh-ccCCCeEEEEcCCCCHHHHHHHHhhc-
Confidence 3678999999999999999999999999 677777775421 11111 11 11357899999999999999998864
Q ss_pred HHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC-
Q 025672 85 NHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT- 163 (249)
Q Consensus 85 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~- 163 (249)
++|+|||+|+..... ...+++...+++|+.++.++++++.+. + ..+||++||...+...
T Consensus 98 ----~~d~Vih~A~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~~~----~--------~~~~v~~SS~~vy~~~~ 157 (346)
T 4egb_A 98 ----DVQVIVNFAAESHVD----RSIENPIPFYDTNVIGTVTLLELVKKY----P--------HIKLVQVSTDEVYGSLG 157 (346)
T ss_dssp ----TCCEEEECCCCC-------------CHHHHHHTHHHHHHHHHHHHS----T--------TSEEEEEEEGGGGCCCC
T ss_pred ----CCCEEEECCcccchh----hhhhCHHHHHHHHHHHHHHHHHHHHhc----C--------CCEEEEeCchHHhCCCC
Confidence 699999999975432 234567888999999999999888643 2 2679999997654432
Q ss_pred -----------ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhccc----
Q 025672 164 -----------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAY---- 228 (249)
Q Consensus 164 -----------~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~---- 228 (249)
.+...|+.+|.+.+.+++.++.++ |++++.+.||.+.++..........+........+..
T Consensus 158 ~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~----g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (346)
T 4egb_A 158 KTGRFTEETPLAPNSPYSSSKASADMIALAYYKTY----QLPVIVTRCSNNYGPYQYPEKLIPLMVTNALEGKKLPLYGD 233 (346)
T ss_dssp SSCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH----CCCEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCCEEETT
T ss_pred cCCCcCCCCCCCCCChhHHHHHHHHHHHHHHHHHh----CCCEEEEeecceeCcCCCccchHHHHHHHHHcCCCceeeCC
Confidence 124679999999999999998775 5999999999999765433322333444333332221
Q ss_pred -----CCCCHHHHHHHHHHhccCC
Q 025672 229 -----KFGEKWDIAMAALYLASDA 247 (249)
Q Consensus 229 -----~~~~~~dva~~v~~l~s~~ 247 (249)
.+...+|+|+++.+++...
T Consensus 234 ~~~~~~~i~v~Dva~a~~~~~~~~ 257 (346)
T 4egb_A 234 GLNVRDWLHVTDHCSAIDVVLHKG 257 (346)
T ss_dssp SCCEECEEEHHHHHHHHHHHHHHC
T ss_pred CCeEEeeEEHHHHHHHHHHHHhcC
Confidence 2345899999999998643
|
| >1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=9.4e-23 Score=174.79 Aligned_cols=215 Identities=14% Similarity=0.060 Sum_probs=150.2
Q ss_pred cEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcch-----HHHHHHHHHhcCC-CeeEEEccCCCHHHHHHHHHHHHHH
Q 025672 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTV-----LRSAVAALHSLGI-PAIGLEGDVRKREDAVRVVESTINH 86 (249)
Q Consensus 13 k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~-----~~~~~~~~~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~~ 86 (249)
|++|||||+|+||++++++|+++|++|++++|+... ++.+..++...+. ++.++.+|++|.+++.++++.+
T Consensus 29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--- 105 (381)
T 1n7h_A 29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVI--- 105 (381)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHH---
T ss_pred CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhccccccccceEEEECCCCCHHHHHHHHHhc---
Confidence 689999999999999999999999999999998654 3322222222233 6889999999999999998765
Q ss_pred hCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc-----
Q 025672 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT----- 161 (249)
Q Consensus 87 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~----- 161 (249)
++|+|||+||..... .+.+++...+++|+.++.++++++.+...+++. .++||++||...+.
T Consensus 106 --~~d~Vih~A~~~~~~----~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~-------~~~~v~~SS~~vyg~~~~~ 172 (381)
T 1n7h_A 106 --KPDEVYNLAAQSHVA----VSFEIPDYTADVVATGALRLLEAVRSHTIDSGR-------TVKYYQAGSSEMFGSTPPP 172 (381)
T ss_dssp --CCSEEEECCSCCCHH----HHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCC-------CCEEEEEEEGGGGTTSCSS
T ss_pred --CCCEEEECCcccCcc----ccccCHHHHHHHHHHHHHHHHHHHHHhCCccCC-------ccEEEEeCcHHHhCCCCCC
Confidence 699999999964321 234667889999999999999999988755321 26899999976543
Q ss_pred -----cCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCCh---HHHHHhhh-hh--------
Q 025672 162 -----ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP---EEIRSKAT-DY-------- 224 (249)
Q Consensus 162 -----~~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~---~~~~~~~~-~~-------- 224 (249)
+..+...|+.+|.+.+.+++.++.+++ +.+..+.|..+..+........ ..+..... ..
T Consensus 173 ~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~----~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~ 248 (381)
T 1n7h_A 173 QSETTPFHPRSPYAASKCAAHWYTVNYREAYG----LFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGN 248 (381)
T ss_dssp BCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHC----CEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESC
T ss_pred CCCCCCCCCCCchHHHHHHHHHHHHHHHHHhC----CcEEEEEeCceeCCCCCCcchhHHHHHHHHHHHcCCCCeEEeCC
Confidence 234467899999999999999998764 5554455544433321111111 11111111 11
Q ss_pred -hcccCCCCHHHHHHHHHHhccCC
Q 025672 225 -MAAYKFGEKWDIAMAALYLASDA 247 (249)
Q Consensus 225 -~~~~~~~~~~dva~~v~~l~s~~ 247 (249)
.....+..++|+|++++++++..
T Consensus 249 ~~~~~~~v~v~Dva~a~~~~~~~~ 272 (381)
T 1n7h_A 249 LQASRDWGFAGDYVEAMWLMLQQE 272 (381)
T ss_dssp TTCEEECEEHHHHHHHHHHHHTSS
T ss_pred CCceeeeEEHHHHHHHHHHHHhCC
Confidence 11234678999999999998754
|
| >2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=2.5e-23 Score=178.31 Aligned_cols=211 Identities=10% Similarity=-0.026 Sum_probs=152.1
Q ss_pred CCCCCCCCcEEEEecCCCchhHHHHHHHHHcC-CeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHH
Q 025672 5 FKGDILKGKVALLTGGGSGIGFEISLQLGKHG-AAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVEST 83 (249)
Q Consensus 5 ~~~~~l~~k~~lItGa~~giG~~~a~~l~~~G-~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 83 (249)
++.+.++++++|||||+|+||++++++|+++| ++|++++|+...... .+. ...++.++.+|++|+++++++++
T Consensus 25 ~~~~~~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~---~l~-~~~~v~~~~~Dl~d~~~l~~~~~-- 98 (377)
T 2q1s_A 25 MNASKLANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKI---NVP-DHPAVRFSETSITDDALLASLQD-- 98 (377)
T ss_dssp -CCGGGTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGG---GSC-CCTTEEEECSCTTCHHHHHHCCS--
T ss_pred CChHHhCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchh---hcc-CCCceEEEECCCCCHHHHHHHhh--
Confidence 44456788999999999999999999999999 999999997653211 011 14578899999999988777654
Q ss_pred HHHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc-CCCCCCCCCCceEEEeccccccc-
Q 025672 84 INHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKG-GRGQASSSSGGIIINISATLHYT- 161 (249)
Q Consensus 84 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~~~~~~~g~iv~iss~~~~~- 161 (249)
++|+|||+||..... .+.+++...+++|+.++.++++++.. . + .++||++||...+.
T Consensus 99 -----~~d~Vih~A~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~~----~~~--------~~~~V~~SS~~vyg~ 157 (377)
T 2q1s_A 99 -----EYDYVFHLATYHGNQ----SSIHDPLADHENNTLTTLKLYERLKH----FKR--------LKKVVYSAAGCSIAE 157 (377)
T ss_dssp -----CCSEEEECCCCSCHH----HHHHCHHHHHHHHTHHHHHHHHHHTT----CSS--------CCEEEEEEEC-----
T ss_pred -----CCCEEEECCCccCch----hhhhCHHHHHHHHHHHHHHHHHHHHH----hCC--------CCeEEEeCCHHHcCC
Confidence 799999999964321 22356788999999999999988742 2 1 26799999975321
Q ss_pred ---------------cC-ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccc---------cC----CC
Q 025672 162 ---------------AT-WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAG---------VS----KL 212 (249)
Q Consensus 162 ---------------~~-~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~---------~~----~~ 212 (249)
+. .+...|+.+|.+.+.+++.++.++ |++++.+.||.+.++.. .. ..
T Consensus 158 ~~~~~~~~~E~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~----gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~ 233 (377)
T 2q1s_A 158 KTFDDAKATEETDIVSLHNNDSPYSMSKIFGEFYSVYYHKQH----QLPTVRARFQNVYGPGEILGAGRWRGTPATVWRN 233 (377)
T ss_dssp ---------CCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHH----CCCEEEEEECCEECTTCCTTCSSCCSSGGGTSCS
T ss_pred CCCCCcCcccccccccccCCCCchHHHHHHHHHHHHHHHHHh----CCCEEEEeeccEECCCCcccccccccCccccccc
Confidence 22 345689999999999999998765 59999999999997654 11 11
Q ss_pred ChHHHHHhhhhhhcc---------cCCCCHHHHHHH-HHHhccC
Q 025672 213 APEEIRSKATDYMAA---------YKFGEKWDIAMA-ALYLASD 246 (249)
Q Consensus 213 ~~~~~~~~~~~~~~~---------~~~~~~~dva~~-v~~l~s~ 246 (249)
....+........+. ..+..++|+|++ ++++++.
T Consensus 234 ~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~i~~~~~~ 277 (377)
T 2q1s_A 234 VTPTFIYKALKGMPLPLENGGVATRDFIFVEDVANGLIACAADG 277 (377)
T ss_dssp HHHHHHHHHHTTCCCCCSGGGCCEECCEEHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHcCCCeEEeCCCCeEEeeEEHHHHHHHHHHHHHhc
Confidence 122333333322221 124568999999 9998865
|
| >3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} | Back alignment and structure |
|---|
Probab=99.90 E-value=1.8e-23 Score=170.87 Aligned_cols=180 Identities=12% Similarity=0.077 Sum_probs=142.3
Q ss_pred cEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCccE
Q 025672 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI 92 (249)
Q Consensus 13 k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ 92 (249)
|++|||||+|+||++++++|+++|++|++++|+..+.. ..++.++.+|++|++++.++++ .+|+
T Consensus 3 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~---------~~~~~~~~~Dl~d~~~~~~~~~-------~~d~ 66 (267)
T 3ay3_A 3 NRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAA---------EAHEEIVACDLADAQAVHDLVK-------DCDG 66 (267)
T ss_dssp EEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCCC---------CTTEEECCCCTTCHHHHHHHHT-------TCSE
T ss_pred ceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCcccc---------CCCccEEEccCCCHHHHHHHHc-------CCCE
Confidence 68999999999999999999999999999999875311 1357899999999999888775 5899
Q ss_pred EEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCc--------
Q 025672 93 LVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW-------- 164 (249)
Q Consensus 93 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~-------- 164 (249)
||||||.. ..+++...+++|+.++.++++++.+. + .++||++||...+...+
T Consensus 67 vi~~a~~~--------~~~~~~~~~~~n~~~~~~l~~a~~~~----~--------~~~iv~~SS~~~~~~~~~~~~~~E~ 126 (267)
T 3ay3_A 67 IIHLGGVS--------VERPWNDILQANIIGAYNLYEAARNL----G--------KPRIVFASSNHTIGYYPRTTRIDTE 126 (267)
T ss_dssp EEECCSCC--------SCCCHHHHHHHTHHHHHHHHHHHHHT----T--------CCEEEEEEEGGGSTTSBTTSCBCTT
T ss_pred EEECCcCC--------CCCCHHHHHHHHHHHHHHHHHHHHHh----C--------CCEEEEeCCHHHhCCCCCCCCCCCC
Confidence 99999964 22346788999999999999988642 2 26899999987654332
Q ss_pred ----cchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHH
Q 025672 165 ----YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAA 240 (249)
Q Consensus 165 ----~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v 240 (249)
+...|+.+|.+++.+++.++. ++|++++.|.||++..... ... ....+.+++|+|+++
T Consensus 127 ~~~~~~~~Y~~sK~~~e~~~~~~~~----~~gi~~~~lrp~~v~~~~~----~~~----------~~~~~~~~~dva~~~ 188 (267)
T 3ay3_A 127 VPRRPDSLYGLSKCFGEDLASLYYH----KFDIETLNIRIGSCFPKPK----DAR----------MMATWLSVDDFMRLM 188 (267)
T ss_dssp SCCCCCSHHHHHHHHHHHHHHHHHH----TTCCCEEEEEECBCSSSCC----SHH----------HHHHBCCHHHHHHHH
T ss_pred CCCCCCChHHHHHHHHHHHHHHHHH----HcCCCEEEEeceeecCCCC----CCC----------eeeccccHHHHHHHH
Confidence 347899999999999998864 4579999999999852211 111 123468999999999
Q ss_pred HHhccC
Q 025672 241 LYLASD 246 (249)
Q Consensus 241 ~~l~s~ 246 (249)
..++..
T Consensus 189 ~~~~~~ 194 (267)
T 3ay3_A 189 KRAFVA 194 (267)
T ss_dssp HHHHHS
T ss_pred HHHHhC
Confidence 998864
|
| >4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.90 E-value=3.9e-23 Score=179.87 Aligned_cols=206 Identities=14% Similarity=0.014 Sum_probs=148.0
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcc---hHHHHHHHHHh---------cCCCeeEEEccCCCHHHH
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT---VLRSAVAALHS---------LGIPAIGLEGDVRKREDA 76 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~---~~~~~~~~~~~---------~~~~~~~~~~Dl~~~~~~ 76 (249)
...+|++|||||+|+||++++++|++.|++|++++|+.. ..+.+.+.+.. .+.++.++.+|++|++++
T Consensus 66 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l 145 (427)
T 4f6c_A 66 HRPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDV 145 (427)
T ss_dssp CCCCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CCC
T ss_pred CCCCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcccC
Confidence 456789999999999999999999999999999999987 33444443322 246899999999998887
Q ss_pred HHHHHHHHHHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecc
Q 025672 77 VRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISA 156 (249)
Q Consensus 77 ~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss 156 (249)
. .++++|+||||||... ..+++...+++|+.++.++++++.+ . ..+||++||
T Consensus 146 ~--------~~~~~d~Vih~A~~~~-------~~~~~~~~~~~Nv~g~~~l~~aa~~---~----------~~~~v~~SS 197 (427)
T 4f6c_A 146 V--------LPENMDTIIHAGARTD-------HFGDDDEFEKVNVQGTVDVIRLAQQ---H----------HARLIYVST 197 (427)
T ss_dssp C--------CSSCCSEEEECCCCC--------------CHHHHHHHHHHHHHHHHHH---T----------TCEEEEEEE
T ss_pred C--------CcCCCCEEEECCcccC-------CCCCHHHHHHHHHHHHHHHHHHHHh---c----------CCcEEEECc
Confidence 7 4578999999999653 2346788899999999999999876 1 267999999
Q ss_pred ccc--c----------------ccCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCC-----
Q 025672 157 TLH--Y----------------TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA----- 213 (249)
Q Consensus 157 ~~~--~----------------~~~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~----- 213 (249)
... . .+..+...|+.+|.+.+.+++.++. .|++++.|.||+|.++.......
T Consensus 198 ~~~G~~~~~~~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-----~g~~~~ivRpg~v~G~~~~~~~~~~~~~ 272 (427)
T 4f6c_A 198 ISVGTYFDIDTEDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVN-----NGLDGRIVRVGNLTSPYNGRWHMRNIKT 272 (427)
T ss_dssp GGGGSEECSSCSCCEECTTCSCSSCCCCSHHHHHHHHHHHHHHHHHH-----TTCCEEEEEECCEESCSSSCCCCTTGGG
T ss_pred hHhCCCccCCCCCccccccccccCCCCCCchHHHHHHHHHHHHHHHH-----cCCCEEEEeCCeeecCCCCCccccCcch
Confidence 876 0 0022567899999999999988652 47999999999999765433211
Q ss_pred --hHHHHHhhhhhh--c------ccCCCCHHHHHHHHHHhccCC
Q 025672 214 --PEEIRSKATDYM--A------AYKFGEKWDIAMAALYLASDA 247 (249)
Q Consensus 214 --~~~~~~~~~~~~--~------~~~~~~~~dva~~v~~l~s~~ 247 (249)
...+.+...... + ...+...+|+|+++++++...
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~DvA~ai~~~~~~~ 316 (427)
T 4f6c_A 273 NRFSMVMNDLLQLDCIGVSMAEMPVDFSFVDTTARQIVALAQVN 316 (427)
T ss_dssp CHHHHHHHHHHHSSEEEHHHHTCEECCEEHHHHHHHHHHHTTSC
T ss_pred HHHHHHHHHHHhcCCCCCccccceEEEeeHHHHHHHHHHHHcCC
Confidence 112333222221 1 123667899999999998754
|
| >3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=1.2e-23 Score=175.57 Aligned_cols=198 Identities=17% Similarity=0.055 Sum_probs=148.5
Q ss_pred cEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCccE
Q 025672 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI 92 (249)
Q Consensus 13 k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ 92 (249)
+++|||||+|+||++++++|+++|++|++++|+....... ....+.++.+|++|.+ +.++++ . |+
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~~~~~~~~~~Dl~d~~-~~~~~~-------~-d~ 65 (312)
T 3ko8_A 1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREF------VNPSAELHVRDLKDYS-WGAGIK-------G-DV 65 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGG------SCTTSEEECCCTTSTT-TTTTCC-------C-SE
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhh------cCCCceEEECccccHH-HHhhcC-------C-CE
Confidence 4799999999999999999999999999999976643321 1456889999999987 655543 3 99
Q ss_pred EEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc----------
Q 025672 93 LVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA---------- 162 (249)
Q Consensus 93 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~---------- 162 (249)
|||+|+... ...+.+++...+++|+.++.++++++... + .++||++||...+..
T Consensus 66 vih~A~~~~----~~~~~~~~~~~~~~n~~~~~~l~~a~~~~----~--------~~~iv~~SS~~vyg~~~~~~~~e~~ 129 (312)
T 3ko8_A 66 VFHFAANPE----VRLSTTEPIVHFNENVVATFNVLEWARQT----G--------VRTVVFASSSTVYGDADVIPTPEEE 129 (312)
T ss_dssp EEECCSSCS----SSGGGSCHHHHHHHHHHHHHHHHHHHHHH----T--------CCEEEEEEEGGGGCSCSSSSBCTTS
T ss_pred EEECCCCCC----chhhhhCHHHHHHHHHHHHHHHHHHHHHc----C--------CCEEEEeCcHHHhCCCCCCCCCCCC
Confidence 999999543 23455667889999999999999988543 2 167999999765532
Q ss_pred -CccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhh-hc---------ccCCC
Q 025672 163 -TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDY-MA---------AYKFG 231 (249)
Q Consensus 163 -~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~-~~---------~~~~~ 231 (249)
..+...|+.+|.+.+.+++.++.++ |++++.+.||.+.++....... ..+...+... .+ ...+.
T Consensus 130 ~~~p~~~Y~~sK~~~e~~~~~~~~~~----g~~~~~lrp~~v~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~i 204 (312)
T 3ko8_A 130 PYKPISVYGAAKAAGEVMCATYARLF----GVRCLAVRYANVVGPRLRHGVI-YDFIMKLRRNPNVLEVLGDGTQRKSYL 204 (312)
T ss_dssp CCCCCSHHHHHHHHHHHHHHHHHHHH----CCEEEEEEECEEECTTCCSSHH-HHHHHHHHHCTTEEEEC----CEECEE
T ss_pred CCCCCChHHHHHHHHHHHHHHHHHHh----CCCEEEEeeccccCcCCCCChH-HHHHHHHHhCCCCeEEcCCCCeEEeeE
Confidence 2346789999999999999999876 5999999999999775443222 2222222221 11 12345
Q ss_pred CHHHHHHHHHHhccC
Q 025672 232 EKWDIAMAALYLASD 246 (249)
Q Consensus 232 ~~~dva~~v~~l~s~ 246 (249)
.++|+|++++++++.
T Consensus 205 ~v~Dva~a~~~~~~~ 219 (312)
T 3ko8_A 205 YVRDAVEATLAAWKK 219 (312)
T ss_dssp EHHHHHHHHHHHHHH
T ss_pred EHHHHHHHHHHHHHh
Confidence 699999999999864
|
| >2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=5.6e-23 Score=176.26 Aligned_cols=206 Identities=18% Similarity=0.076 Sum_probs=152.2
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhC
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 88 (249)
..+.+++|||||+|+||++++++|+++|++|++++|+....... ...++.++.+|++|.++++++++
T Consensus 26 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~~~~v~~~~~Dl~d~~~~~~~~~------- 92 (379)
T 2c5a_A 26 PSENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTE------DMFCDEFHLVDLRVMENCLKVTE------- 92 (379)
T ss_dssp TTSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCG------GGTCSEEEECCTTSHHHHHHHHT-------
T ss_pred cccCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhh------ccCCceEEECCCCCHHHHHHHhC-------
Confidence 34568999999999999999999999999999999986643211 12368899999999999888774
Q ss_pred CccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc-------
Q 025672 89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT------- 161 (249)
Q Consensus 89 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~------- 161 (249)
.+|+|||+||...... ...+++...+++|+.++.++++++... + .++||++||...+.
T Consensus 93 ~~d~Vih~A~~~~~~~---~~~~~~~~~~~~Nv~g~~~ll~a~~~~----~--------~~~~V~~SS~~v~~~~~~~~~ 157 (379)
T 2c5a_A 93 GVDHVFNLAADMGGMG---FIQSNHSVIMYNNTMISFNMIEAARIN----G--------IKRFFYASSACIYPEFKQLET 157 (379)
T ss_dssp TCSEEEECCCCCCCHH---HHTTCHHHHHHHHHHHHHHHHHHHHHT----T--------CSEEEEEEEGGGSCGGGSSSS
T ss_pred CCCEEEECceecCccc---ccccCHHHHHHHHHHHHHHHHHHHHHc----C--------CCEEEEEeehheeCCCCCCCc
Confidence 6999999999643211 113457888999999999999988632 2 16799999976543
Q ss_pred -----------cCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCC----ChHHHHHhhhhhh-
Q 025672 162 -----------ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL----APEEIRSKATDYM- 225 (249)
Q Consensus 162 -----------~~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~----~~~~~~~~~~~~~- 225 (249)
+..+...|+.+|.+.+.+++.++.++ |++++.|.||++.++...... ....+........
T Consensus 158 ~~~~~~E~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~----gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (379)
T 2c5a_A 158 TNVSLKESDAWPAEPQDAFGLEKLATEELCKHYNKDF----GIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTD 233 (379)
T ss_dssp SSCEECGGGGSSBCCSSHHHHHHHHHHHHHHHHHHHH----CCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSS
T ss_pred cCCCcCcccCCCCCCCChhHHHHHHHHHHHHHHHHHH----CCCEEEEEeCceeCcCCCcccccccHHHHHHHHHHhCCC
Confidence 22345689999999999999998765 599999999999976543211 1223333322211
Q ss_pred --c-------ccCCCCHHHHHHHHHHhccC
Q 025672 226 --A-------AYKFGEKWDIAMAALYLASD 246 (249)
Q Consensus 226 --~-------~~~~~~~~dva~~v~~l~s~ 246 (249)
+ ...+..++|+|++++++++.
T Consensus 234 ~~~~~g~g~~~~~~i~v~Dva~ai~~~l~~ 263 (379)
T 2c5a_A 234 RFEMWGDGLQTRSFTFIDECVEGVLRLTKS 263 (379)
T ss_dssp CEEEESCSCCEECCEEHHHHHHHHHHHHHS
T ss_pred ceEEeCCCCeeEEEEEHHHHHHHHHHHhhc
Confidence 1 22355699999999999864
|
| >1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=3.1e-22 Score=172.35 Aligned_cols=172 Identities=17% Similarity=0.075 Sum_probs=134.5
Q ss_pred CcEEEEecCCCchhHHHHHHHH-HcCCeEEEEeCCcch---------HHHHHHHHHhc-----CCC---eeEEEccCCCH
Q 025672 12 GKVALLTGGGSGIGFEISLQLG-KHGAAIAIMGRRKTV---------LRSAVAALHSL-----GIP---AIGLEGDVRKR 73 (249)
Q Consensus 12 ~k~~lItGa~~giG~~~a~~l~-~~G~~v~l~~r~~~~---------~~~~~~~~~~~-----~~~---~~~~~~Dl~~~ 73 (249)
++++|||||+|+||++++++|+ ++|++|++++|+... .+.+.+.+... ..+ +.++.+|++|+
T Consensus 2 ~m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~ 81 (397)
T 1gy8_A 2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE 81 (397)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCH
Confidence 4589999999999999999999 999999999987654 34443333332 124 88999999999
Q ss_pred HHHHHHHHHHHHHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEE
Q 025672 74 EDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIIN 153 (249)
Q Consensus 74 ~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~ 153 (249)
+++++++++ ++++|+|||+||..... .+.++++..+++|+.+++++++++.. .+ .++||+
T Consensus 82 ~~~~~~~~~----~~~~d~vih~A~~~~~~----~~~~~~~~~~~~Nv~g~~~ll~a~~~----~~--------~~~iv~ 141 (397)
T 1gy8_A 82 DFLNGVFTR----HGPIDAVVHMCAFLAVG----ESVRDPLKYYDNNVVGILRLLQAMLL----HK--------CDKIIF 141 (397)
T ss_dssp HHHHHHHHH----SCCCCEEEECCCCCCHH----HHHHCHHHHHHHHHHHHHHHHHHHHH----TT--------CCEEEE
T ss_pred HHHHHHHHh----cCCCCEEEECCCccCcC----cchhhHHHHHHHHhHHHHHHHHHHHH----hC--------CCEEEE
Confidence 998888764 46699999999965321 13456788999999999999998643 22 268999
Q ss_pred eccccccccCc------------------cchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccccc
Q 025672 154 ISATLHYTATW------------------YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTA 207 (249)
Q Consensus 154 iss~~~~~~~~------------------~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~ 207 (249)
+||...+.... +...|+.+|.+.+.+++.++.++ |++++.+.||++..+.
T Consensus 142 ~SS~~v~g~~~~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~----gi~~~ilRp~~v~G~~ 209 (397)
T 1gy8_A 142 SSSAAIFGNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAY----GIKGICLRYFNACGAH 209 (397)
T ss_dssp EEEGGGTBSCCC-----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHH----CCEEEEEEECEEECCC
T ss_pred ECCHHHhCCCCcccccccccCcCccCCCCCCCchHHHHHHHHHHHHHHHHHH----CCcEEEEeccceeCCC
Confidence 99965442221 25689999999999999999876 5999999999998664
|
| >1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=3.8e-23 Score=174.95 Aligned_cols=204 Identities=17% Similarity=0.133 Sum_probs=150.2
Q ss_pred cEEEEecCCCchhHHHHHHHHHc--CCeEEEEeCCcch-HHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCC
Q 025672 13 KVALLTGGGSGIGFEISLQLGKH--GAAIAIMGRRKTV-LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK 89 (249)
Q Consensus 13 k~~lItGa~~giG~~~a~~l~~~--G~~v~l~~r~~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 89 (249)
|++|||||+|+||++++++|+++ |++|++++|+... .....+++ .+.++.++.+|++|+++++++++ .
T Consensus 5 ~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~-------~ 75 (348)
T 1oc2_A 5 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAI--LGDRVELVVGDIADAELVDKLAA-------K 75 (348)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGG--CSSSEEEEECCTTCHHHHHHHHT-------T
T ss_pred cEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhhh--ccCCeEEEECCCCCHHHHHHHhh-------c
Confidence 68999999999999999999999 8999999986521 11111111 13578999999999999888775 4
Q ss_pred ccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc--------
Q 025672 90 LDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT-------- 161 (249)
Q Consensus 90 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~-------- 161 (249)
+|+|||+||.... +.+.++++..+++|+.++.++++++.+. +++||++||...+.
T Consensus 76 ~d~vih~A~~~~~----~~~~~~~~~~~~~Nv~g~~~l~~a~~~~-------------~~~~v~~SS~~vyg~~~~~~~~ 138 (348)
T 1oc2_A 76 ADAIVHYAAESHN----DNSLNDPSPFIHTNFIGTYTLLEAARKY-------------DIRFHHVSTDEVYGDLPLREDL 138 (348)
T ss_dssp CSEEEECCSCCCH----HHHHHCCHHHHHHHTHHHHHHHHHHHHH-------------TCEEEEEEEGGGGCCBCCGGGS
T ss_pred CCEEEECCcccCc----cchhhCHHHHHHHHHHHHHHHHHHHHHh-------------CCeEEEecccceeCCCcccccc
Confidence 6999999996431 1233556788999999999999999865 14799999975432
Q ss_pred ---------------cCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhh-
Q 025672 162 ---------------ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYM- 225 (249)
Q Consensus 162 ---------------~~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~- 225 (249)
+..+...|+.+|.+.+.+++.++.++ |++++.+.||.+.++..........+........
T Consensus 139 ~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~----gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~ 214 (348)
T 1oc2_A 139 PGHGEGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSF----GVKATISNCSNNYGPYQHIEKFIPRQITNILAGIK 214 (348)
T ss_dssp TTTTCSTTSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH----CCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCC
T ss_pred cccccccCCCcCCCCCCCCCCccHHHHHHHHHHHHHHHHHh----CCCEEEEeeceeeCCCCCccchHHHHHHHHHcCCC
Confidence 22345689999999999999999876 5999999999999775432211222322222211
Q ss_pred --------cccCCCCHHHHHHHHHHhccC
Q 025672 226 --------AAYKFGEKWDIAMAALYLASD 246 (249)
Q Consensus 226 --------~~~~~~~~~dva~~v~~l~s~ 246 (249)
+...+.+++|+|+++++++++
T Consensus 215 ~~~~~~~~~~~~~i~v~Dva~~~~~~~~~ 243 (348)
T 1oc2_A 215 PKLYGEGKNVRDWIHTNDHSTGVWAILTK 243 (348)
T ss_dssp CEEETTSCCEEECEEHHHHHHHHHHHHHH
T ss_pred ceEecCCCceEeeEEHHHHHHHHHHHhhC
Confidence 123467899999999999864
|
| >1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.90 E-value=1.4e-22 Score=173.35 Aligned_cols=212 Identities=15% Similarity=0.069 Sum_probs=149.5
Q ss_pred cEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcch-----HHHHHHHHHh-cCCCeeEEEccCCCHHHHHHHHHHHHHH
Q 025672 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTV-----LRSAVAALHS-LGIPAIGLEGDVRKREDAVRVVESTINH 86 (249)
Q Consensus 13 k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~-----~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 86 (249)
|++|||||+|+||++++++|+++|++|++++|+... ++.+.+++.. .+.++.++.+|++|.+++.++++.+
T Consensus 25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--- 101 (375)
T 1t2a_A 25 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEV--- 101 (375)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHH---
T ss_pred cEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHHhc---
Confidence 689999999999999999999999999999997643 2222111110 2346889999999999999998765
Q ss_pred hCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc----
Q 025672 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA---- 162 (249)
Q Consensus 87 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~---- 162 (249)
++|+|||+||..... .+.++++..+++|+.++.++++++.+...+. .++||++||...+..
T Consensus 102 --~~d~vih~A~~~~~~----~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~---------~~~iv~~SS~~~~~~~~~~ 166 (375)
T 1t2a_A 102 --KPTEIYNLGAQSHVK----ISFDLAEYTADVDGVGTLRLLDAVKTCGLIN---------SVKFYQASTSELYGKVQEI 166 (375)
T ss_dssp --CCSEEEECCSCCCHH----HHHHSHHHHHHHHTHHHHHHHHHHHHTTCTT---------TCEEEEEEEGGGTCSCSSS
T ss_pred --CCCEEEECCCccccc----ccccCHHHHHHHHHHHHHHHHHHHHHhCCCc---------cceEEEecchhhhCCCCCC
Confidence 699999999964311 1346678899999999999999987654211 267999999766542
Q ss_pred -------CccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChH---HHHHhhh-hhh---cc-
Q 025672 163 -------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPE---EIRSKAT-DYM---AA- 227 (249)
Q Consensus 163 -------~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~---~~~~~~~-~~~---~~- 227 (249)
..+...|+.+|.+.+.+++.++.++ |+.+..+.|+.+..+......... .+..... ... ..
T Consensus 167 ~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~----~~~~~i~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g 242 (375)
T 1t2a_A 167 PQKETTPFYPRSPYGAAKLYAYWIVVNFREAY----NLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLG 242 (375)
T ss_dssp SBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH----CCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEES
T ss_pred CCCccCCCCCCChhHHHHHHHHHHHHHHHHHh----CCCEEEEecccccCCCCCCCcchHHHHHHHHHHHcCCCceeEeC
Confidence 2245689999999999999999876 478888888777654322211111 1111111 111 11
Q ss_pred -----cCCCCHHHHHHHHHHhccC
Q 025672 228 -----YKFGEKWDIAMAALYLASD 246 (249)
Q Consensus 228 -----~~~~~~~dva~~v~~l~s~ 246 (249)
..+...+|+|++++.++..
T Consensus 243 ~~~~~~~~i~v~Dva~a~~~~~~~ 266 (375)
T 1t2a_A 243 NLDAKRDWGHAKDYVEAMWLMLQN 266 (375)
T ss_dssp CTTCEECCEEHHHHHHHHHHHHHS
T ss_pred CCCceeeeEEHHHHHHHHHHHHhc
Confidence 1355799999999998754
|
| >1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.90 E-value=4.7e-22 Score=169.73 Aligned_cols=212 Identities=15% Similarity=0.071 Sum_probs=145.1
Q ss_pred cEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchH-----HHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVL-----RSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 13 k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~-----~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
|++|||||+|+||++++++|+++|++|++++|+.+.. +.+.++....+.++.++.+|++|.++++++++.+
T Consensus 2 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---- 77 (372)
T 1db3_A 2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREV---- 77 (372)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHH----
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhc----
Confidence 7899999999999999999999999999999986542 1111111112357889999999999999998865
Q ss_pred CCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc-----
Q 025672 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA----- 162 (249)
Q Consensus 88 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~----- 162 (249)
++|+||||||..... .+.+++...+++|+.++.++++++.+...+. +++||++||...+..
T Consensus 78 -~~d~vih~A~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~---------~~~iv~~SS~~v~g~~~~~~ 143 (372)
T 1db3_A 78 -QPDEVYNLGAMSHVA----VSFESPEYTADVDAMGTLRLLEAIRFLGLEK---------KTRFYQASTSELYGLVQEIP 143 (372)
T ss_dssp -CCSEEEECCCCCTTT----TTTSCHHHHHHHHTHHHHHHHHHHHHTTCTT---------TCEEEEEEEGGGGTTCCSSS
T ss_pred -CCCEEEECCcccCcc----ccccCHHHHHHHHHHHHHHHHHHHHHhCCCC---------CcEEEEeCChhhhCCCCCCC
Confidence 699999999965422 2445678889999999999999997654321 267999999765432
Q ss_pred ------CccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCCh---HHHHHhhhhh-h---c---
Q 025672 163 ------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP---EEIRSKATDY-M---A--- 226 (249)
Q Consensus 163 ------~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~---~~~~~~~~~~-~---~--- 226 (249)
..+...|+.+|.+.+.+++.++.+++ +.+..+.|..+..+........ ..+....... . .
T Consensus 144 ~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~----~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~ 219 (372)
T 1db3_A 144 QKETTPFYPRSPYAVAKLYAYWITVNYRESYG----MYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGN 219 (372)
T ss_dssp BCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHC----CCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESC
T ss_pred CCccCCCCCCChHHHHHHHHHHHHHHHHHHhC----CCeEEEEECCccCCCCCCcchhhHHHHHHHHHHcCCCCceeecC
Confidence 12356899999999999999998763 6666666666654432111111 1111111111 0 1
Q ss_pred ---ccCCCCHHHHHHHHHHhccC
Q 025672 227 ---AYKFGEKWDIAMAALYLASD 246 (249)
Q Consensus 227 ---~~~~~~~~dva~~v~~l~s~ 246 (249)
...+...+|+|++++.++..
T Consensus 220 ~~~~~~~i~v~Dva~a~~~~~~~ 242 (372)
T 1db3_A 220 MDSLRDWGHAKDYVKMQWMMLQQ 242 (372)
T ss_dssp TTCEECCEEHHHHHHHHHHTTSS
T ss_pred CCceeeeeEHHHHHHHHHHHHhc
Confidence 11356789999999998864
|
| >2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} | Back alignment and structure |
|---|
Probab=99.90 E-value=3.5e-23 Score=173.28 Aligned_cols=206 Identities=13% Similarity=0.042 Sum_probs=139.2
Q ss_pred CcEEEEecCCCchhHHHHHHHHHcCCeEEEEeC-Ccch---HHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGR-RKTV---LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 12 ~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r-~~~~---~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
+|++|||||+|+||++++++|+++|++|+++.| +.+. .+.+ .++...+.++.++.+|++|+++++++++
T Consensus 1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------ 73 (322)
T 2p4h_X 1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFL-TNLPGASEKLHFFNADLSNPDSFAAAIE------ 73 (322)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCCHHH-HTSTTHHHHEEECCCCTTCGGGGHHHHT------
T ss_pred CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHHHHH-HhhhccCCceEEEecCCCCHHHHHHHHc------
Confidence 588999999999999999999999999999988 5432 2211 1111111257889999999999888775
Q ss_pred CCccEEEEcCCCCCCCCCCCCCHHH-HHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCc--
Q 025672 88 GKLDILVNAAAGNFLVPAEDLSPNG-FRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW-- 164 (249)
Q Consensus 88 ~~id~vi~~ag~~~~~~~~~~~~~~-~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~-- 164 (249)
.+|+|||+|+.. . .+.++ ++..+++|+.+++++++++.+.+ + .++||++||..+..+.+
T Consensus 74 -~~d~vih~A~~~---~---~~~~~~~~~~~~~nv~gt~~l~~aa~~~~---~--------~~~iV~~SS~~~~~~~~~~ 135 (322)
T 2p4h_X 74 -GCVGIFHTASPI---D---FAVSEPEEIVTKRTVDGALGILKACVNSK---T--------VKRFIYTSSGSAVSFNGKD 135 (322)
T ss_dssp -TCSEEEECCCCC--------------CHHHHHHHHHHHHHHHHHTTCS---S--------CCEEEEEEEGGGTSCSSSC
T ss_pred -CCCEEEEcCCcc---c---CCCCChHHHHHHHHHHHHHHHHHHHHhcC---C--------ccEEEEeccHHHcccCCCC
Confidence 579999999632 1 12222 35689999999999999886431 1 26899999987543211
Q ss_pred --------------------cchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChH--HHHHhhh
Q 025672 165 --------------------YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPE--EIRSKAT 222 (249)
Q Consensus 165 --------------------~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~--~~~~~~~ 222 (249)
....|+.||.+.+.+++.++.+ +|++++.|.||++.++......... .......
T Consensus 136 ~~~~~e~~~~~~~~~~~~~p~~~~Y~~sK~~~e~~~~~~~~~----~gi~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~ 211 (322)
T 2p4h_X 136 KDVLDESDWSDVDLLRSVKPFGWNYAVSKTLAEKAVLEFGEQ----NGIDVVTLILPFIVGRFVCPKLPDSIEKALVLVL 211 (322)
T ss_dssp CSEECTTCCCCHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHH----TTCCEEEEEECEEESCCCSSSCCHHHHHHTHHHH
T ss_pred CeecCCccccchhhhcccCcccccHHHHHHHHHHHHHHHHHh----cCCcEEEEcCCceECCCCCCCCCchHHHHHHHHh
Confidence 0116999998877776655543 4799999999999987543322211 1111111
Q ss_pred h---hhccc--CCCCHHHHHHHHHHhccC
Q 025672 223 D---YMAAY--KFGEKWDIAMAALYLASD 246 (249)
Q Consensus 223 ~---~~~~~--~~~~~~dva~~v~~l~s~ 246 (249)
. ..+.. .+.+++|+|+++++++++
T Consensus 212 g~~~~~~~~~~~~i~v~Dva~a~~~~~~~ 240 (322)
T 2p4h_X 212 GKKEQIGVTRFHMVHVDDVARAHIYLLEN 240 (322)
T ss_dssp SCGGGCCEEEEEEEEHHHHHHHHHHHHHS
T ss_pred CCCccCcCCCcCEEEHHHHHHHHHHHhhC
Confidence 1 11111 378899999999999864
|
| >3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.90 E-value=1.5e-22 Score=169.03 Aligned_cols=198 Identities=14% Similarity=0.078 Sum_probs=144.4
Q ss_pred cEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCccE
Q 025672 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI 92 (249)
Q Consensus 13 k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ 92 (249)
|++|||||+|+||++++++|+++|..|++..++....+ .....+.++.+|++| +++.++++ .+|+
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~~g~~v~~~~~~~~~~~-------~~~~~~~~~~~Dl~~-~~~~~~~~-------~~d~ 66 (313)
T 3ehe_A 2 SLIVVTGGAGFIGSHVVDKLSESNEIVVIDNLSSGNEE-------FVNEAARLVKADLAA-DDIKDYLK-------GAEE 66 (313)
T ss_dssp -CEEEETTTSHHHHHHHHHHTTTSCEEEECCCSSCCGG-------GSCTTEEEECCCTTT-SCCHHHHT-------TCSE
T ss_pred CEEEEECCCchHHHHHHHHHHhCCCEEEEEcCCCCChh-------hcCCCcEEEECcCCh-HHHHHHhc-------CCCE
Confidence 47999999999999999999999955555444443222 124568899999999 88777764 6999
Q ss_pred EEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc-----------
Q 025672 93 LVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT----------- 161 (249)
Q Consensus 93 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~----------- 161 (249)
|||+|+... ...+.++++..+++|+.++.++++++... +. ++||++||...+.
T Consensus 67 vih~a~~~~----~~~~~~~~~~~~~~nv~~~~~l~~~~~~~----~~--------~~iv~~SS~~vyg~~~~~~~~E~~ 130 (313)
T 3ehe_A 67 VWHIAANPD----VRIGAENPDEIYRNNVLATYRLLEAMRKA----GV--------SRIVFTSTSTVYGEAKVIPTPEDY 130 (313)
T ss_dssp EEECCCCCC----CC-CCCCHHHHHHHHHHHHHHHHHHHHHH----TC--------CEEEEECCGGGGCSCSSSSBCTTS
T ss_pred EEECCCCCC----hhhhhhCHHHHHHHHHHHHHHHHHHHHHc----CC--------CeEEEeCchHHhCcCCCCCCCCCC
Confidence 999999532 23455678889999999999999886532 22 6899999976552
Q ss_pred cCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhh-hc---------ccCCC
Q 025672 162 ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDY-MA---------AYKFG 231 (249)
Q Consensus 162 ~~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~-~~---------~~~~~ 231 (249)
+..+...|+.+|.+.+.+++.++.++ |++++.+.|+.+.++....... ..+....... .+ ...+.
T Consensus 131 ~~~~~~~Y~~sK~~~e~~~~~~~~~~----g~~~~ilRp~~v~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~i 205 (313)
T 3ehe_A 131 PTHPISLYGASKLACEALIESYCHTF----DMQAWIYRFANVIGRRSTHGVI-YDFIMKLKRNPEELEILGNGEQNKSYI 205 (313)
T ss_dssp CCCCCSHHHHHHHHHHHHHHHHHHHT----TCEEEEEECSCEESTTCCCSHH-HHHHHHHHHCTTEEEESTTSCCEECCE
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHhc----CCCEEEEeeccccCcCCCcChH-HHHHHHHHcCCCceEEeCCCCeEEeEE
Confidence 33456789999999999999999875 6999999999999764433221 2222222211 11 12356
Q ss_pred CHHHHHHHHHHhccC
Q 025672 232 EKWDIAMAALYLASD 246 (249)
Q Consensus 232 ~~~dva~~v~~l~s~ 246 (249)
..+|+|+++++++++
T Consensus 206 ~v~Dva~a~~~~~~~ 220 (313)
T 3ehe_A 206 YISDCVDAMLFGLRG 220 (313)
T ss_dssp EHHHHHHHHHHHTTC
T ss_pred EHHHHHHHHHHHhcc
Confidence 789999999999974
|
| >2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=99.90 E-value=1.5e-22 Score=170.56 Aligned_cols=201 Identities=15% Similarity=0.024 Sum_probs=142.7
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhC
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 88 (249)
.++++++|||||+|+||++++++|+++|++|++++|+.....+. +... .++.++.+|++|.++++++++. +
T Consensus 18 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---l~~~-~~~~~~~~Dl~d~~~~~~~~~~-----~ 88 (333)
T 2q1w_A 18 GSHMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREH---LKDH-PNLTFVEGSIADHALVNQLIGD-----L 88 (333)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGG---SCCC-TTEEEEECCTTCHHHHHHHHHH-----H
T ss_pred cCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhh---Hhhc-CCceEEEEeCCCHHHHHHHHhc-----c
Confidence 36789999999999999999999999999999999975432110 1111 3688999999999999988875 2
Q ss_pred CccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc----cC-
Q 025672 89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT----AT- 163 (249)
Q Consensus 89 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~----~~- 163 (249)
++|+|||+||..... +.++++ +++|+.++.++++++.+. + .++||++||...+. ..
T Consensus 89 ~~D~vih~A~~~~~~-----~~~~~~--~~~N~~~~~~l~~a~~~~----~--------~~~iV~~SS~~~~g~~~~~~~ 149 (333)
T 2q1w_A 89 QPDAVVHTAASYKDP-----DDWYND--TLTNCVGGSNVVQAAKKN----N--------VGRFVYFQTALCYGVKPIQQP 149 (333)
T ss_dssp CCSEEEECCCCCSCT-----TCHHHH--HHHHTHHHHHHHHHHHHT----T--------CSEEEEEEEGGGGCSCCCSSS
T ss_pred CCcEEEECceecCCC-----ccCChH--HHHHHHHHHHHHHHHHHh----C--------CCEEEEECcHHHhCCCcccCC
Confidence 699999999975432 334444 999999999999998752 2 26899999976653 21
Q ss_pred -------ccc-hhhHHHHHHHHHHHHH-HHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhh------hhccc
Q 025672 164 -------WYQ-IHVSAAKAAVDSITRS-LALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATD------YMAAY 228 (249)
Q Consensus 164 -------~~~-~~y~~sK~a~~~l~~~-la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~------~~~~~ 228 (249)
.+. ..|+.+|.+.+.+++. ++ ++..|.|+.+..+. ........+.+.... ..+..
T Consensus 150 ~~~~E~~~p~~~~Y~~sK~~~E~~~~~s~~---------~~~ilR~~~v~gp~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (333)
T 2q1w_A 150 VRLDHPRNPANSSYAISKSANEDYLEYSGL---------DFVTFRLANVVGPR-NVSGPLPIFFQRLSEGKKCFVTKARR 219 (333)
T ss_dssp BCTTSCCCCTTCHHHHHHHHHHHHHHHHTC---------CEEEEEESEEESTT-CCSSHHHHHHHHHHTTCCCEEEECEE
T ss_pred CCcCCCCCCCCCchHHHHHHHHHHHHhhhC---------CeEEEeeceEECcC-CcCcHHHHHHHHHHcCCeeeCCCceE
Confidence 234 7899999999999876 44 45677788777554 111111222222211 11234
Q ss_pred CCCCHHHHHHHHHHhccCC
Q 025672 229 KFGEKWDIAMAALYLASDA 247 (249)
Q Consensus 229 ~~~~~~dva~~v~~l~s~~ 247 (249)
.+.+++|+|+++.++++..
T Consensus 220 ~~i~v~Dva~ai~~~~~~~ 238 (333)
T 2q1w_A 220 DFVFVKDLARATVRAVDGV 238 (333)
T ss_dssp CEEEHHHHHHHHHHHHTTC
T ss_pred eeEEHHHHHHHHHHHHhcC
Confidence 5678999999999998754
|
| >2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.90 E-value=2.7e-22 Score=169.40 Aligned_cols=215 Identities=15% Similarity=0.072 Sum_probs=152.0
Q ss_pred CCCCCCCCcEEEEecCCCchhHHHHHHHHHcC-------CeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHH
Q 025672 5 FKGDILKGKVALLTGGGSGIGFEISLQLGKHG-------AAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAV 77 (249)
Q Consensus 5 ~~~~~l~~k~~lItGa~~giG~~~a~~l~~~G-------~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~ 77 (249)
.....++++++|||||+|+||++++++|+++| ++|++++|+...... ..+.++.++.+|++|+++++
T Consensus 7 ~~~~~~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~------~~~~~~~~~~~Dl~d~~~~~ 80 (342)
T 2hrz_A 7 RENLYFQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA------GFSGAVDARAADLSAPGEAE 80 (342)
T ss_dssp CCCSCCSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT------TCCSEEEEEECCTTSTTHHH
T ss_pred CCCCCccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc------ccCCceeEEEcCCCCHHHHH
Confidence 34456789999999999999999999999999 799999998653321 12456889999999999988
Q ss_pred HHHHHHHHHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccc
Q 025672 78 RVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISAT 157 (249)
Q Consensus 78 ~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~ 157 (249)
++++ +++|+|||+||.... .+.+++...+++|+.++.++++++.+...+... .++||++||.
T Consensus 81 ~~~~------~~~d~vih~A~~~~~-----~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~-------~~~iv~~SS~ 142 (342)
T 2hrz_A 81 KLVE------ARPDVIFHLAAIVSG-----EAELDFDKGYRINLDGTRYLFDAIRIANGKDGY-------KPRVVFTSSI 142 (342)
T ss_dssp HHHH------TCCSEEEECCCCCHH-----HHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCC-------CCEEEEEEEG
T ss_pred HHHh------cCCCEEEECCccCcc-----cccccHHHHHHHHHHHHHHHHHHHHhcccccCC-------CcEEEEeCch
Confidence 8875 479999999996431 234678899999999999999999875432110 1679999998
Q ss_pred cccccC-c----------cchhhHHHHHHHHHHHHHHHHHhc-CCCCeEEEEEe--cCccccccccCCCChHHHHHhhhh
Q 025672 158 LHYTAT-W----------YQIHVSAAKAAVDSITRSLALEWG-TDYAIRVNGIA--PGPIKDTAGVSKLAPEEIRSKATD 223 (249)
Q Consensus 158 ~~~~~~-~----------~~~~y~~sK~a~~~l~~~la~e~~-~~~gi~v~~v~--pG~v~t~~~~~~~~~~~~~~~~~~ 223 (249)
..+.+. + +...|+.+|.+.+.+++.++.+.. ....+|++.|. ||.+.+.. ... ...+......
T Consensus 143 ~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~~~~~~--~~~-~~~~~~~~~~ 219 (342)
T 2hrz_A 143 AVFGAPLPYPIPDEFHTTPLTSYGTQKAICELLLSDYSRRGFFDGIGIRLPTICIRPGKPNAAA--SGF-FSNILREPLV 219 (342)
T ss_dssp GGCCSSCCSSBCTTCCCCCSSHHHHHHHHHHHHHHHHHHTTSCEEEEEEECEETTCCSSCCCSG--GGH-HHHHHHHHHT
T ss_pred HhhCCCCCCCcCCCCCCCCcchHHHHHHHHHHHHHHHHHhcCCCceeEEeeeEEecCCCCcchh--HHH-HHHHHHHHhc
Confidence 665432 1 567899999999999999887632 02235666665 76654321 011 1122222211
Q ss_pred h----hcccC-----CCCHHHHHHHHHHhccC
Q 025672 224 Y----MAAYK-----FGEKWDIAMAALYLASD 246 (249)
Q Consensus 224 ~----~~~~~-----~~~~~dva~~v~~l~s~ 246 (249)
. .+... +..++|+++++++++..
T Consensus 220 ~~~~~~~~~~~~~~~~~~v~Dva~~~~~~~~~ 251 (342)
T 2hrz_A 220 GQEAVLPVPESIRHWHASPRSAVGFLIHGAMI 251 (342)
T ss_dssp TCCEEECSCTTCEEEEECHHHHHHHHHHHHHS
T ss_pred CCCeeccCCCccceeeEehHHHHHHHHHHHhc
Confidence 1 12211 45799999999988753
|
| >3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.90 E-value=1.2e-23 Score=167.84 Aligned_cols=194 Identities=11% Similarity=0.003 Sum_probs=142.6
Q ss_pred cEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCccE
Q 025672 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI 92 (249)
Q Consensus 13 k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ 92 (249)
+++|||||+|+||++++++|+++|++|++++|+.++.+. ...++.++.+|++|.++++++++ .+|+
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-------~~~~~~~~~~Dl~d~~~~~~~~~-------~~d~ 70 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKI-------ENEHLKVKKADVSSLDEVCEVCK-------GADA 70 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCC-------CCTTEEEECCCTTCHHHHHHHHT-------TCSE
T ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchh-------ccCceEEEEecCCCHHHHHHHhc-------CCCE
Confidence 689999999999999999999999999999999775432 12578999999999999988875 5899
Q ss_pred EEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC---------
Q 025672 93 LVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT--------- 163 (249)
Q Consensus 93 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~--------- 163 (249)
|||++|..... ...+++|+.++.++++++.+. +. .+||++||.....+.
T Consensus 71 vi~~a~~~~~~----------~~~~~~n~~~~~~l~~~~~~~----~~--------~~~v~~Ss~~~~~~~~~~~~~~~~ 128 (227)
T 3dhn_A 71 VISAFNPGWNN----------PDIYDETIKVYLTIIDGVKKA----GV--------NRFLMVGGAGSLFIAPGLRLMDSG 128 (227)
T ss_dssp EEECCCC----------------CCSHHHHHHHHHHHHHHHT----TC--------SEEEEECCSTTSEEETTEEGGGTT
T ss_pred EEEeCcCCCCC----------hhHHHHHHHHHHHHHHHHHHh----CC--------CEEEEeCChhhccCCCCCccccCC
Confidence 99999854211 126889999999998887542 21 579999998765443
Q ss_pred -ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHH
Q 025672 164 -WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALY 242 (249)
Q Consensus 164 -~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~ 242 (249)
.+...|+.+|.+.+.+.+.++. ..|++++.+.||++.++..............+.. .....+.+++|+|+++.+
T Consensus 129 ~~p~~~Y~~sK~~~e~~~~~~~~----~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~-~~~~~~i~~~Dva~ai~~ 203 (227)
T 3dhn_A 129 EVPENILPGVKALGEFYLNFLMK----EKEIDWVFFSPAADMRPGVRTGRYRLGKDDMIVD-IVGNSHISVEDYAAAMID 203 (227)
T ss_dssp CSCGGGHHHHHHHHHHHHHTGGG----CCSSEEEEEECCSEEESCCCCCCCEEESSBCCCC-TTSCCEEEHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHHhh----ccCccEEEEeCCcccCCCccccceeecCCCcccC-CCCCcEEeHHHHHHHHHH
Confidence 2367899999999998888775 4589999999999987644322211000000000 001235689999999999
Q ss_pred hccCC
Q 025672 243 LASDA 247 (249)
Q Consensus 243 l~s~~ 247 (249)
++...
T Consensus 204 ~l~~~ 208 (227)
T 3dhn_A 204 ELEHP 208 (227)
T ss_dssp HHHSC
T ss_pred HHhCc
Confidence 98664
|
| >2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A | Back alignment and structure |
|---|
Probab=99.89 E-value=1.4e-23 Score=177.03 Aligned_cols=213 Identities=14% Similarity=0.071 Sum_probs=141.2
Q ss_pred CCCCCCCCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHH--HHHHHhcCCCeeEEEccCCCHHHHHH
Q 025672 1 MESPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSA--VAALHSLGIPAIGLEGDVRKREDAVR 78 (249)
Q Consensus 1 ~~~~~~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~--~~~~~~~~~~~~~~~~Dl~~~~~~~~ 78 (249)
|-+..+.+ +|++|||||+|+||++++++|+++|++|+++.|+.+..+.. ...+. ...++.++++|++|.+++++
T Consensus 1 ~~~~~~~~---~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~ 76 (338)
T 2rh8_A 1 MATQHPIG---KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQ-ELGDLKIFRADLTDELSFEA 76 (338)
T ss_dssp -----------CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHHG-GGSCEEEEECCTTTSSSSHH
T ss_pred CCcCcCCC---CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHHHhcC-CCCcEEEEecCCCChHHHHH
Confidence 45555554 68999999999999999999999999999988876543211 12232 23468899999999998887
Q ss_pred HHHHHHHHhCCccEEEEcCCCCCCCCCCCCCHHH-HHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccc
Q 025672 79 VVESTINHFGKLDILVNAAAGNFLVPAEDLSPNG-FRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISAT 157 (249)
Q Consensus 79 ~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~-~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~ 157 (249)
+++ .+|+|||+|+... . ..++ .++.+++|+.++.++++++.+.. . .++||++||.
T Consensus 77 ~~~-------~~D~Vih~A~~~~---~---~~~~~~~~~~~~nv~gt~~ll~aa~~~~---~--------v~r~V~~SS~ 132 (338)
T 2rh8_A 77 PIA-------GCDFVFHVATPVH---F---ASEDPENDMIKPAIQGVVNVMKACTRAK---S--------VKRVILTSSA 132 (338)
T ss_dssp HHT-------TCSEEEEESSCCC---C------------CHHHHHHHHHHHHHHHHCT---T--------CCEEEEECCH
T ss_pred HHc-------CCCEEEEeCCccC---C---CCCCcHHHHHHHHHHHHHHHHHHHHHcC---C--------cCEEEEEecH
Confidence 764 5899999998542 1 1222 24589999999999999887532 1 1679999997
Q ss_pred cccccC---------------------c---cchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCC
Q 025672 158 LHYTAT---------------------W---YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA 213 (249)
Q Consensus 158 ~~~~~~---------------------~---~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~ 213 (249)
.+..+. + ....|+.||.+.+.+++.++++. |++++.|.||.+.++.......
T Consensus 133 ~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~----gi~~~~lrp~~v~Gp~~~~~~~ 208 (338)
T 2rh8_A 133 AAVTINQLDGTGLVVDEKNWTDIEFLTSAKPPTWGYPASKTLAEKAAWKFAEEN----NIDLITVIPTLMAGSSLTSDVP 208 (338)
T ss_dssp HHHHHHHHTCSCCCCCTTTTTCC-------CCCCCCTTSCCHHHHHHHHHHHHH----TCCEEEEEECEEESCCSSSSCC
T ss_pred HHeecCCcCCCCcccChhhccchhhccccCCccchHHHHHHHHHHHHHHHHHHc----CCcEEEEeCCceECCCCCCCCC
Confidence 632210 0 01159999999998888776543 6999999999999875433322
Q ss_pred hHHHHHh---hhh---hh--------ccc--CCCCHHHHHHHHHHhccC
Q 025672 214 PEEIRSK---ATD---YM--------AAY--KFGEKWDIAMAALYLASD 246 (249)
Q Consensus 214 ~~~~~~~---~~~---~~--------~~~--~~~~~~dva~~v~~l~s~ 246 (249)
. ..... ... .. +.+ .+..++|+|++++++++.
T Consensus 209 ~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~ 256 (338)
T 2rh8_A 209 S-SIGLAMSLITGNEFLINGMKGMQMLSGSVSIAHVEDVCRAHIFVAEK 256 (338)
T ss_dssp H-HHHHHHHHHHTCHHHHHHHHHHHHHHSSEEEEEHHHHHHHHHHHHHC
T ss_pred c-hHHHHHHHHcCCccccccccccccccCcccEEEHHHHHHHHHHHHcC
Confidence 1 11100 000 00 001 378899999999999864
|
| >1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=1.8e-22 Score=158.30 Aligned_cols=186 Identities=16% Similarity=0.129 Sum_probs=137.9
Q ss_pred CcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCcc
Q 025672 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD 91 (249)
Q Consensus 12 ~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 91 (249)
+++++||||+|+||++++++|+++|++|++++|+.++.+.. ...++.++.+|++|++++.++++ .+|
T Consensus 3 ~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~------~~~~~~~~~~D~~~~~~~~~~~~-------~~d 69 (206)
T 1hdo_A 3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE------GPRPAHVVVGDVLQAADVDKTVA-------GQD 69 (206)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS------SCCCSEEEESCTTSHHHHHHHHT-------TCS
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccc------cCCceEEEEecCCCHHHHHHHHc-------CCC
Confidence 47899999999999999999999999999999987654321 13568899999999999888765 589
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCc----cch
Q 025672 92 ILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW----YQI 167 (249)
Q Consensus 92 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~----~~~ 167 (249)
+|||++|..... ++ .++|+.++.++++++.+. +. ++||++||...+...+ +..
T Consensus 70 ~vi~~a~~~~~~-----~~------~~~n~~~~~~~~~~~~~~----~~--------~~~v~~Ss~~~~~~~~~~~~~~~ 126 (206)
T 1hdo_A 70 AVIVLLGTRNDL-----SP------TTVMSEGARNIVAAMKAH----GV--------DKVVACTSAFLLWDPTKVPPRLQ 126 (206)
T ss_dssp EEEECCCCTTCC-----SC------CCHHHHHHHHHHHHHHHH----TC--------CEEEEECCGGGTSCTTCSCGGGH
T ss_pred EEEECccCCCCC-----Cc------cchHHHHHHHHHHHHHHh----CC--------CeEEEEeeeeeccCcccccccch
Confidence 999999965431 11 247888888888777543 21 6799999987655443 567
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhccCC
Q 025672 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247 (249)
Q Consensus 168 ~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~ 247 (249)
.|+.+|.+++.+++ ..|++++.|.||++........... .+ ...|.+.+.+++|+|+++.+++++.
T Consensus 127 ~y~~~K~~~e~~~~--------~~~i~~~~lrp~~~~~~~~~~~~~~-----~~-~~~~~~~~i~~~Dva~~~~~~~~~~ 192 (206)
T 1hdo_A 127 AVTDDHIRMHKVLR--------ESGLKYVAVMPPHIGDQPLTGAYTV-----TL-DGRGPSRVISKHDLGHFMLRCLTTD 192 (206)
T ss_dssp HHHHHHHHHHHHHH--------HTCSEEEEECCSEEECCCCCSCCEE-----ES-SSCSSCSEEEHHHHHHHHHHTTSCS
T ss_pred hHHHHHHHHHHHHH--------hCCCCEEEEeCCcccCCCCCcceEe-----cc-cCCCCCCccCHHHHHHHHHHHhcCc
Confidence 89999999998873 2479999999999942222111100 01 1112246788999999999999764
|
| >1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=4.6e-22 Score=168.33 Aligned_cols=171 Identities=14% Similarity=0.068 Sum_probs=132.8
Q ss_pred CcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcch------HHHHHHHHHh-cCCCeeEEEccCCCHHHHHHHHHHHH
Q 025672 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTV------LRSAVAALHS-LGIPAIGLEGDVRKREDAVRVVESTI 84 (249)
Q Consensus 12 ~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~------~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~ 84 (249)
+|++|||||+|+||++++++|+++|++|++++|+... .++..+++.. .+.++.++.+|++|.+++++++++.
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~- 80 (348)
T 1ek6_A 2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKY- 80 (348)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHC-
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHHHHHHHHhc-
Confidence 4789999999999999999999999999999986432 2222333322 2457899999999999998888752
Q ss_pred HHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc--
Q 025672 85 NHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA-- 162 (249)
Q Consensus 85 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~-- 162 (249)
++|+|||+||..... .+.++++..+++|+.++.++++++.. .+ .++||++||...+..
T Consensus 81 ----~~d~vih~A~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~--------~~~iv~~SS~~~~g~~~ 140 (348)
T 1ek6_A 81 ----SFMAVIHFAGLKAVG----ESVQKPLDYYRVNLTGTIQLLEIMKA----HG--------VKNLVFSSSATVYGNPQ 140 (348)
T ss_dssp ----CEEEEEECCSCCCHH----HHHHCHHHHHHHHHHHHHHHHHHHHH----TT--------CCEEEEEEEGGGGCSCS
T ss_pred ----CCCEEEECCCCcCcc----chhhchHHHHHHHHHHHHHHHHHHHH----hC--------CCEEEEECcHHHhCCCC
Confidence 699999999964321 13456788999999999999887642 22 268999999765431
Q ss_pred ----------CccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccc
Q 025672 163 ----------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDT 206 (249)
Q Consensus 163 ----------~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~ 206 (249)
.+....|+.+|.+.+.+++.++.+ . .+++++.+.|+.+..+
T Consensus 141 ~~~~~E~~~~~p~~~~Y~~sK~~~e~~~~~~~~~-~--~~~~~~~lR~~~v~G~ 191 (348)
T 1ek6_A 141 YLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQA-D--KTWNAVLLRYFNPTGA 191 (348)
T ss_dssp SSSBCTTSCCCCCSSHHHHHHHHHHHHHHHHHHH-C--TTCEEEEEEECEEECC
T ss_pred CCCcCCCCCCCCCCCchHHHHHHHHHHHHHHHhc-C--CCcceEEEeeccccCC
Confidence 122678999999999999999887 3 3699999999999865
|
| >2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=7.3e-23 Score=170.76 Aligned_cols=202 Identities=15% Similarity=0.093 Sum_probs=147.2
Q ss_pred EEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCccEE
Q 025672 14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDIL 93 (249)
Q Consensus 14 ~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~v 93 (249)
++|||||+|+||++++++|+++|++|++++|+...... ....++.++.+|++|++++++++++. .+|+|
T Consensus 2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~------~~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d~v 70 (311)
T 2p5y_A 2 RVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKRE------NVPKGVPFFRVDLRDKEGVERAFREF-----RPTHV 70 (311)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCGG------GSCTTCCEECCCTTCHHHHHHHHHHH-----CCSEE
T ss_pred EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCchh------hcccCeEEEECCCCCHHHHHHHHHhc-----CCCEE
Confidence 68999999999999999999999999999985432110 11135778999999999999888652 68999
Q ss_pred EEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc-----------
Q 025672 94 VNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA----------- 162 (249)
Q Consensus 94 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~----------- 162 (249)
||+|+.... ..+.+++...+++|+.+++++++++.. .+ .++||++||..+.++
T Consensus 71 i~~a~~~~~----~~~~~~~~~~~~~N~~g~~~l~~a~~~----~~--------~~~iv~~SS~~~~~g~~~~~~~~~E~ 134 (311)
T 2p5y_A 71 SHQAAQASV----KVSVEDPVLDFEVNLLGGLNLLEACRQ----YG--------VEKLVFASTGGAIYGEVPEGERAEET 134 (311)
T ss_dssp EECCSCCCH----HHHHHCHHHHHHHHTHHHHHHHHHHHH----TT--------CSEEEEEEEHHHHHCCCCTTCCBCTT
T ss_pred EECccccCc----hhhhhCHHHHHHHHHHHHHHHHHHHHH----hC--------CCEEEEeCCChhhcCCCCCCCCcCCC
Confidence 999996431 123456788999999999999998853 22 167999999722111
Q ss_pred --CccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCC---hHHHHHhhhhhhc-----------
Q 025672 163 --TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA---PEEIRSKATDYMA----------- 226 (249)
Q Consensus 163 --~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~---~~~~~~~~~~~~~----------- 226 (249)
..+...|+.+|.+++.+++.++.++ |++++.+.||.+.++....... ...+.+......+
T Consensus 135 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~----~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (311)
T 2p5y_A 135 WPPRPKSPYAASKAAFEHYLSVYGQSY----GLKWVSLRYGNVYGPRQDPHGEAGVVAIFAERVLKGLPVTLYARKTPGD 210 (311)
T ss_dssp SCCCCCSHHHHHHHHHHHHHHHHHHHH----CCCEEEEEECEEECTTCCSSSTTHHHHHHHHHHHHTCCEEEECSSSTTS
T ss_pred CCCCCCChHHHHHHHHHHHHHHHHHHc----CCCEEEEeeccccCcCCCCCCcCcHHHHHHHHHHcCCCcEEEecccCCC
Confidence 1245689999999999999998875 5999999999999775432211 1222222222111
Q ss_pred ---ccCCCCHHHHHHHHHHhccC
Q 025672 227 ---AYKFGEKWDIAMAALYLASD 246 (249)
Q Consensus 227 ---~~~~~~~~dva~~v~~l~s~ 246 (249)
...+..++|+|+++.+++++
T Consensus 211 g~~~~~~i~v~Dva~a~~~~~~~ 233 (311)
T 2p5y_A 211 EGCVRDYVYVGDVAEAHALALFS 233 (311)
T ss_dssp CCCEECEEEHHHHHHHHHHHHHH
T ss_pred CCeEEeeEEHHHHHHHHHHHHhC
Confidence 12356789999999998853
|
| >1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=6.7e-23 Score=172.79 Aligned_cols=204 Identities=17% Similarity=0.105 Sum_probs=148.5
Q ss_pred EEEEecCCCchhHHHHHHHHHc---C---CeEEEEeCCcc--hHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHH
Q 025672 14 VALLTGGGSGIGFEISLQLGKH---G---AAIAIMGRRKT--VLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN 85 (249)
Q Consensus 14 ~~lItGa~~giG~~~a~~l~~~---G---~~v~l~~r~~~--~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 85 (249)
++|||||+|+||++++++|+++ | ++|++++|+.. ..+.+ +.+. .+.++.++.+|++|++++++++
T Consensus 2 ~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~-~~~~-~~~~~~~~~~Dl~d~~~~~~~~----- 74 (337)
T 1r6d_A 2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANL-APVD-ADPRLRFVHGDIRDAGLLAREL----- 74 (337)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGG-GGGT-TCTTEEEEECCTTCHHHHHHHT-----
T ss_pred eEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhh-hhcc-cCCCeEEEEcCCCCHHHHHHHh-----
Confidence 6899999999999999999997 8 89999998642 11111 1111 1357899999999999888776
Q ss_pred HhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc----
Q 025672 86 HFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT---- 161 (249)
Q Consensus 86 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~---- 161 (249)
.++|+|||+||.... +.+.++++..+++|+.++.++++++.+.. .++||++||...+.
T Consensus 75 --~~~d~Vih~A~~~~~----~~~~~~~~~~~~~Nv~~~~~l~~a~~~~~------------~~~~v~~SS~~vyg~~~~ 136 (337)
T 1r6d_A 75 --RGVDAIVHFAAESHV----DRSIAGASVFTETNVQGTQTLLQCAVDAG------------VGRVVHVSTNQVYGSIDS 136 (337)
T ss_dssp --TTCCEEEECCSCCCH----HHHHHCCHHHHHHHTHHHHHHHHHHHHTT------------CCEEEEEEEGGGGCCCSS
T ss_pred --cCCCEEEECCCccCc----hhhhhCHHHHHHHHHHHHHHHHHHHHHcC------------CCEEEEecchHHhCCCCC
Confidence 479999999996431 11234567889999999999999987641 16799999975432
Q ss_pred -------cCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhh--hc------
Q 025672 162 -------ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDY--MA------ 226 (249)
Q Consensus 162 -------~~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~--~~------ 226 (249)
+..+...|+.+|.+.+.+++.++.++ |++++.+.||.+.++..........+....... .+
T Consensus 137 ~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~----g~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (337)
T 1r6d_A 137 GSWTESSPLEPNSPYAASKAGSDLVARAYHRTY----GLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGA 212 (337)
T ss_dssp SCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH----CCCEEEEEECEEECTTCCTTSHHHHHHHHHHTTCCEEEETTSC
T ss_pred CCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHH----CCCEEEEEeeeeECCCCCCCChHHHHHHHHhcCCCcEEeCCCC
Confidence 22346789999999999999998875 599999999999976543221122233322221 11
Q ss_pred -ccCCCCHHHHHHHHHHhccC
Q 025672 227 -AYKFGEKWDIAMAALYLASD 246 (249)
Q Consensus 227 -~~~~~~~~dva~~v~~l~s~ 246 (249)
...+..++|+|+++.+++++
T Consensus 213 ~~~~~i~v~Dva~a~~~~~~~ 233 (337)
T 1r6d_A 213 NVREWVHTDDHCRGIALVLAG 233 (337)
T ss_dssp CEEEEEEHHHHHHHHHHHHHH
T ss_pred eeEeeEeHHHHHHHHHHHHhC
Confidence 12456789999999998864
|
| >1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.89 E-value=4.8e-22 Score=167.37 Aligned_cols=212 Identities=14% Similarity=0.037 Sum_probs=149.5
Q ss_pred CCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHH-HHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhC
Q 025672 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLR-SAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (249)
Q Consensus 10 l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 88 (249)
-.++++|||||+|+||++++++|+++|++|++++|+..... ...+.+. .+.++.++.+|++|.++++++++.+
T Consensus 12 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~----- 85 (335)
T 1rpn_A 12 SMTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELG-IEGDIQYEDGDMADACSVQRAVIKA----- 85 (335)
T ss_dssp ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTT-CGGGEEEEECCTTCHHHHHHHHHHH-----
T ss_pred ccCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhcc-ccCceEEEECCCCCHHHHHHHHHHc-----
Confidence 35789999999999999999999999999999999865421 1111111 2346889999999999999998765
Q ss_pred CccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC-----
Q 025672 89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT----- 163 (249)
Q Consensus 89 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~----- 163 (249)
++|+|||+||..... .+.+++...+++|+.++.++++++.+.-. .++||++||...+...
T Consensus 86 ~~d~Vih~A~~~~~~----~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-----------~~~~v~~SS~~v~g~~~~~~~ 150 (335)
T 1rpn_A 86 QPQEVYNLAAQSFVG----ASWNQPVTTGVVDGLGVTHLLEAIRQFSP-----------ETRFYQASTSEMFGLIQAERQ 150 (335)
T ss_dssp CCSEEEECCSCCCHH----HHTTSHHHHHHHHTHHHHHHHHHHHHHCT-----------TSEEEEEEEGGGGCSCSSSSB
T ss_pred CCCEEEECccccchh----hhhhChHHHHHHHHHHHHHHHHHHHHhCC-----------CCeEEEEeCHHHhCCCCCCCC
Confidence 689999999964311 11245678899999999999999865410 1679999997654332
Q ss_pred ------ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCCh---HHHHHhhh-hhhc---c---
Q 025672 164 ------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP---EEIRSKAT-DYMA---A--- 227 (249)
Q Consensus 164 ------~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~---~~~~~~~~-~~~~---~--- 227 (249)
.+...|+.+|.+.+.+++.++.++ |+.+..+.|+.+..+........ ..+..... ...+ .
T Consensus 151 ~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~----~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~g 226 (335)
T 1rpn_A 151 DENTPFYPRSPYGVAKLYGHWITVNYRESF----GLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNV 226 (335)
T ss_dssp CTTSCCCCCSHHHHHHHHHHHHHHHHHHHH----CCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCT
T ss_pred CcccCCCCCChhHHHHHHHHHHHHHHHHHc----CCcEEEEeeCcccCCCCCCCcchHHHHHHHHHHHcCCCceEEeCCC
Confidence 124579999999999999998775 48888899988876543222211 11111111 1111 1
Q ss_pred ---cCCCCHHHHHHHHHHhccC
Q 025672 228 ---YKFGEKWDIAMAALYLASD 246 (249)
Q Consensus 228 ---~~~~~~~dva~~v~~l~s~ 246 (249)
..+...+|+|+++..++..
T Consensus 227 ~~~~~~i~v~Dva~a~~~~~~~ 248 (335)
T 1rpn_A 227 DAKRDWGFAGDYVEAMWLMLQQ 248 (335)
T ss_dssp TCEEECEEHHHHHHHHHHHHHS
T ss_pred cceeceEEHHHHHHHHHHHHhc
Confidence 1245679999999998864
|
| >3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} | Back alignment and structure |
|---|
Probab=99.88 E-value=4.2e-22 Score=158.37 Aligned_cols=188 Identities=11% Similarity=0.005 Sum_probs=131.1
Q ss_pred EEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCccEE
Q 025672 14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDIL 93 (249)
Q Consensus 14 ~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~v 93 (249)
++|||||+|+||++++++|+++|++|++++|+.++++.+ ....+.++.+|++|+++ +.++.+|+|
T Consensus 2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~~~~~~~D~~d~~~---------~~~~~~d~v 66 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADR------LGATVATLVKEPLVLTE---------ADLDSVDAV 66 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH------TCTTSEEEECCGGGCCH---------HHHTTCSEE
T ss_pred EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecccccccc------cCCCceEEecccccccH---------hhcccCCEE
Confidence 599999999999999999999999999999998765433 23478999999999988 234579999
Q ss_pred EEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCcc--------
Q 025672 94 VNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY-------- 165 (249)
Q Consensus 94 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~-------- 165 (249)
|||+|...... ..++|+.++.++++++ .+. ++++|++||..+..+.+.
T Consensus 67 i~~ag~~~~~~-----------~~~~n~~~~~~l~~a~----~~~---------~~~~v~~SS~~~~~~~~~~~~~~~~~ 122 (224)
T 3h2s_A 67 VDALSVPWGSG-----------RGYLHLDFATHLVSLL----RNS---------DTLAVFILGSASLAMPGADHPMILDF 122 (224)
T ss_dssp EECCCCCTTSS-----------CTHHHHHHHHHHHHTC----TTC---------CCEEEEECCGGGSBCTTCSSCGGGGC
T ss_pred EECCccCCCcc-----------hhhHHHHHHHHHHHHH----HHc---------CCcEEEEecceeeccCCCCccccccC
Confidence 99999752110 1346777765555443 332 277999999876554332
Q ss_pred ------chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHH
Q 025672 166 ------QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMA 239 (249)
Q Consensus 166 ------~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~ 239 (249)
...|+.+|.+.+.+ + .... ..|++++.|.||++.++........ ....+........+.+++|+|++
T Consensus 123 ~~~~~~~~~y~~sK~~~e~~-~---~~~~-~~~i~~~ivrp~~v~g~~~~~~~~~--~~~~~~~~~~~~~~i~~~DvA~~ 195 (224)
T 3h2s_A 123 PESAASQPWYDGALYQYYEY-Q---FLQM-NANVNWIGISPSEAFPSGPATSYVA--GKDTLLVGEDGQSHITTGNMALA 195 (224)
T ss_dssp CGGGGGSTTHHHHHHHHHHH-H---HHTT-CTTSCEEEEEECSBCCCCCCCCEEE--ESSBCCCCTTSCCBCCHHHHHHH
T ss_pred CCCCccchhhHHHHHHHHHH-H---HHHh-cCCCcEEEEcCccccCCCcccCcee--cccccccCCCCCceEeHHHHHHH
Confidence 56799999988854 2 2223 6789999999999987622211000 00000001112357899999999
Q ss_pred HHHhccCC
Q 025672 240 ALYLASDA 247 (249)
Q Consensus 240 v~~l~s~~ 247 (249)
+++++...
T Consensus 196 ~~~~l~~~ 203 (224)
T 3h2s_A 196 ILDQLEHP 203 (224)
T ss_dssp HHHHHHSC
T ss_pred HHHHhcCc
Confidence 99998654
|
| >2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=3.3e-22 Score=169.97 Aligned_cols=206 Identities=15% Similarity=0.144 Sum_probs=146.1
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcC-CeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHG-AAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G-~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
.++++++|||||+|+||++++++|+++| ++|++++|+..... ...+ ..+. +.+|++|.+.++.+++. ..+
T Consensus 43 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~~~~----~~~~-~~~d~~~~~~~~~~~~~--~~~ 113 (357)
T 2x6t_A 43 GIEGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK--FVNL----VDLN-IADYMDKEDFLIQIMAG--EEF 113 (357)
T ss_dssp -----CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGG--GGGT----TTSC-CSEEEEHHHHHHHHHTT--CCC
T ss_pred cCCCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcch--hhcc----cCce-EeeecCcHHHHHHHHhh--ccc
Confidence 4678999999999999999999999999 89999998765421 0111 1223 77899999988887753 124
Q ss_pred CCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCc---
Q 025672 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW--- 164 (249)
Q Consensus 88 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~--- 164 (249)
+++|+|||+||.... +.++++..+++|+.++.++++++.+.- .+||++||...+....
T Consensus 114 ~~~d~Vih~A~~~~~------~~~~~~~~~~~n~~~~~~ll~a~~~~~-------------~r~V~~SS~~v~g~~~~~~ 174 (357)
T 2x6t_A 114 GDVEAIFHEGACSST------TEWDGKYMMDNNYQYSKELLHYCLERE-------------IPFLYASSAATYGGRTSDF 174 (357)
T ss_dssp SSCCEEEECCSCCCT------TCCCHHHHHHHTHHHHHHHHHHHHHHT-------------CCEEEEEEGGGGCSCSSCC
T ss_pred CCCCEEEECCcccCC------ccCCHHHHHHHHHHHHHHHHHHHHHcC-------------CeEEEEcchHHhCCCCCCC
Confidence 579999999996542 234567889999999999999998631 2599999986654322
Q ss_pred --------cchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCC----CChHHHHHhhhhh--------
Q 025672 165 --------YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK----LAPEEIRSKATDY-------- 224 (249)
Q Consensus 165 --------~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~----~~~~~~~~~~~~~-------- 224 (249)
+...|+.+|.+.+.+++.++.+ .|++++.|.||.+.++..... .....+.+.....
T Consensus 175 ~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~----~g~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (357)
T 2x6t_A 175 IESREYEKPLNVFGYSKFLFDEYVRQILPE----ANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEG 250 (357)
T ss_dssp CSSGGGCCCSSHHHHHHHHHHHHHHHHGGG----CSSCEEEEEECEEESSSCTTCGGGSCHHHHHHHHHHTTCCCEEETT
T ss_pred cCCcCCCCCCChhHHHHHHHHHHHHHHHHH----cCCCEEEEecCeEECCCCCCCcccchHHHHHHHHHHcCCCcEEeCC
Confidence 2568999999999999988754 379999999999987643211 1112222222211
Q ss_pred -hc-ccCCCCHHHHHHHHHHhccC
Q 025672 225 -MA-AYKFGEKWDIAMAALYLASD 246 (249)
Q Consensus 225 -~~-~~~~~~~~dva~~v~~l~s~ 246 (249)
.. ...+..++|+|++++++++.
T Consensus 251 ~~~~~~~~i~v~Dva~ai~~~~~~ 274 (357)
T 2x6t_A 251 SENFKRDFVYVGDVADVNLWFLEN 274 (357)
T ss_dssp GGGCEECEEEHHHHHHHHHHHHHH
T ss_pred CCcceEccEEHHHHHHHHHHHHhc
Confidence 11 33457899999999999864
|
| >2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A | Back alignment and structure |
|---|
Probab=99.87 E-value=6.3e-22 Score=165.31 Aligned_cols=192 Identities=13% Similarity=0.075 Sum_probs=112.9
Q ss_pred CcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCcc
Q 025672 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD 91 (249)
Q Consensus 12 ~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 91 (249)
+|++|||||+|+||++++++|+++|++|++++|+... + + ++.+|++|+++++++++.. ++|
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-----------~-~--~~~~Dl~d~~~~~~~~~~~-----~~d 62 (315)
T 2ydy_A 2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR-----------P-K--FEQVNLLDSNAVHHIIHDF-----QPH 62 (315)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC--------------------------------CHHHHHHH-----CCS
T ss_pred CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC-----------C-C--eEEecCCCHHHHHHHHHhh-----CCC
Confidence 5789999999999999999999999999999987543 1 1 6789999999999888764 699
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc---------
Q 025672 92 ILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA--------- 162 (249)
Q Consensus 92 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~--------- 162 (249)
+|||+||..... .+.++++..+++|+.++.++++++.+. +++||++||...+.+
T Consensus 63 ~vih~A~~~~~~----~~~~~~~~~~~~n~~~~~~l~~a~~~~-------------~~~~v~~SS~~v~~~~~~~~~E~~ 125 (315)
T 2ydy_A 63 VIVHCAAERRPD----VVENQPDAASQLNVDASGNLAKEAAAV-------------GAFLIYISSDYVFDGTNPPYREED 125 (315)
T ss_dssp EEEECC-----------------------CHHHHHHHHHHHHH-------------TCEEEEEEEGGGSCSSSCSBCTTS
T ss_pred EEEECCcccChh----hhhcCHHHHHHHHHHHHHHHHHHHHHc-------------CCeEEEEchHHHcCCCCCCCCCCC
Confidence 999999965321 245677889999999999999999753 157999999876544
Q ss_pred -CccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhh-hh-------hcccCCCCH
Q 025672 163 -TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKAT-DY-------MAAYKFGEK 233 (249)
Q Consensus 163 -~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~-~~-------~~~~~~~~~ 233 (249)
..+...|+.+|.+.+.+++.++.++ ..||.+.|. |+..++. ..... .+..... .. .+...+.++
T Consensus 126 ~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~lR~~~v~-G~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~v 198 (315)
T 2ydy_A 126 IPAPLNLYGKTKLDGEKAVLENNLGA---AVLRIPILY-GEVEKLE--ESAVT-VMFDKVQFSNKSANMDHWQQRFPTHV 198 (315)
T ss_dssp CCCCCSHHHHHHHHHHHHHHHHCTTC---EEEEECSEE-CSCSSGG--GSTTG-GGHHHHHCCSSCEEEECSSBBCCEEH
T ss_pred CCCCcCHHHHHHHHHHHHHHHhCCCe---EEEeeeeee-CCCCccc--ccHHH-HHHHHHHhcCCCeeeccCceECcEEH
Confidence 3446789999999999998875332 134444444 4433211 01111 1111111 11 123456789
Q ss_pred HHHHHHHHHhccC
Q 025672 234 WDIAMAALYLASD 246 (249)
Q Consensus 234 ~dva~~v~~l~s~ 246 (249)
+|+|+++.+++++
T Consensus 199 ~Dva~a~~~~~~~ 211 (315)
T 2ydy_A 199 KDVATVCRQLAEK 211 (315)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh
Confidence 9999999999864
|
| >2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.87 E-value=4e-21 Score=161.35 Aligned_cols=164 Identities=14% Similarity=0.093 Sum_probs=130.1
Q ss_pred cEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCccE
Q 025672 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI 92 (249)
Q Consensus 13 k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ 92 (249)
+++|||||+|+||++++++|+++|++|++++|+..... + ....++.++.+|++|.+++++++++ .++|+
T Consensus 2 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~---~---~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~ 70 (330)
T 2c20_A 2 NSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHE---D---AITEGAKFYNGDLRDKAFLRDVFTQ-----ENIEA 70 (330)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCG---G---GSCTTSEEEECCTTCHHHHHHHHHH-----SCEEE
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCch---h---hcCCCcEEEECCCCCHHHHHHHHhh-----cCCCE
Confidence 57999999999999999999999999999998754322 1 1123688999999999999888765 37999
Q ss_pred EEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC---------
Q 025672 93 LVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT--------- 163 (249)
Q Consensus 93 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~--------- 163 (249)
|||+||..... .+.+++...+++|+.++.++++++.. .+ .++||++||...+...
T Consensus 71 vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~a~~~----~~--------~~~~v~~Ss~~~~~~~~~~~~~E~~ 134 (330)
T 2c20_A 71 VMHFAADSLVG----VSMEKPLQYYNNNVYGALCLLEVMDE----FK--------VDKFIFSSTAATYGEVDVDLITEET 134 (330)
T ss_dssp EEECCCCCCHH----HHHHSHHHHHHHHHHHHHHHHHHHHH----TT--------CCEEEEECCGGGGCSCSSSSBCTTS
T ss_pred EEECCcccCcc----ccccCHHHHHHHHhHHHHHHHHHHHH----cC--------CCEEEEeCCceeeCCCCCCCCCcCC
Confidence 99999964321 13456788999999999999988753 22 2679999997654321
Q ss_pred --ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccccc
Q 025672 164 --WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTA 207 (249)
Q Consensus 164 --~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~ 207 (249)
.+...|+.+|.+.+.+++.++.++ |++++.+.||.+.++.
T Consensus 135 ~~~~~~~Y~~sK~~~e~~~~~~~~~~----~~~~~ilrp~~v~G~~ 176 (330)
T 2c20_A 135 MTNPTNTYGETKLAIEKMLHWYSQAS----NLRYKIFRYFNVAGAT 176 (330)
T ss_dssp CCCCSSHHHHHHHHHHHHHHHHHHTS----SCEEEEEECSEEECCC
T ss_pred CCCCCChHHHHHHHHHHHHHHHHHHh----CCcEEEEecCcccCCC
Confidence 235789999999999999988653 7999999999998663
|
| >1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=4.9e-21 Score=161.44 Aligned_cols=169 Identities=18% Similarity=0.124 Sum_probs=126.6
Q ss_pred EEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHh-cCCCeeEEEccCCCHHHHHHHHHHHHHHhCCccE
Q 025672 14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHS-LGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI 92 (249)
Q Consensus 14 ~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ 92 (249)
++|||||+|+||++++++|+++|++|++++|.........+.+.. .+.++.++.+|++|+++++++++.. ++|+
T Consensus 2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~D~ 76 (338)
T 1udb_A 2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDH-----AIDT 76 (338)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHT-----TCSE
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhcCCcceEEEccCCCHHHHHHHhhcc-----CCCE
Confidence 689999999999999999999999999998753321122222222 2456889999999999998888652 6999
Q ss_pred EEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc----------
Q 025672 93 LVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA---------- 162 (249)
Q Consensus 93 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~---------- 162 (249)
|||+||..... ...++....+++|+.++.++++++.. .+. ++||++||...+..
T Consensus 77 vih~A~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~--------~~iv~~SS~~~~g~~~~~~~~e~~ 140 (338)
T 1udb_A 77 VIHFAGLKAVG----ESVQKPLEYYDNNVNGTLRLISAMRA----ANV--------KNFIFSSSATVYGDNPKIPYVESF 140 (338)
T ss_dssp EEECCSCCCHH----HHHHCHHHHHHHHHHHHHHHHHHHHH----HTC--------CEEEEEEEGGGGCSCCSSSBCTTS
T ss_pred EEECCccCccc----cchhcHHHHHHHHHHHHHHHHHHHHh----cCC--------CeEEEEccHHHhCCCCCCCcCccc
Confidence 99999964321 12344677899999999999887543 222 67999999765421
Q ss_pred -C-ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccc
Q 025672 163 -T-WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDT 206 (249)
Q Consensus 163 -~-~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~ 206 (249)
. ++...|+.+|.+++.+++.++.++ .|+++..+.|+.+..+
T Consensus 141 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~ilR~~~v~G~ 183 (338)
T 1udb_A 141 PTGTPQSPYGKSKLMVEQILTDLQKAQ---PDWSIALLRYFNPVGA 183 (338)
T ss_dssp CCCCCSSHHHHHHHHHHHHHHHHHHHS---TTCEEEEEEECEEECC
T ss_pred CCCCCCChHHHHHHHHHHHHHHHHHhc---CCCceEEEeeceecCC
Confidence 1 236689999999999999999874 2699999998777643
|
| >3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.87 E-value=2.7e-21 Score=153.21 Aligned_cols=188 Identities=11% Similarity=-0.001 Sum_probs=123.8
Q ss_pred EEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCccEE
Q 025672 14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDIL 93 (249)
Q Consensus 14 ~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~v 93 (249)
++|||||+|+||++++++|+++|++|++++|+.++++.+. ..+.++.+|++|+++ +.+..+|+|
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-------~~~~~~~~D~~d~~~---------~~~~~~d~v 65 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH-------KDINILQKDIFDLTL---------SDLSDQNVV 65 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC-------SSSEEEECCGGGCCH---------HHHTTCSEE
T ss_pred eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc-------CCCeEEeccccChhh---------hhhcCCCEE
Confidence 5899999999999999999999999999999987655432 468899999999987 223579999
Q ss_pred EEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCc---------
Q 025672 94 VNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW--------- 164 (249)
Q Consensus 94 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~--------- 164 (249)
||++|.... ..++|+.+..++ ++.+.+.+ .+++|++||..+..+.+
T Consensus 66 i~~ag~~~~-------------~~~~~~~~~~~l----~~a~~~~~--------~~~~v~~SS~~~~~~~~~~~~~~~~~ 120 (221)
T 3ew7_A 66 VDAYGISPD-------------EAEKHVTSLDHL----ISVLNGTV--------SPRLLVVGGAASLQIDEDGNTLLESK 120 (221)
T ss_dssp EECCCSSTT-------------TTTSHHHHHHHH----HHHHCSCC--------SSEEEEECCCC---------------
T ss_pred EECCcCCcc-------------ccchHHHHHHHH----HHHHHhcC--------CceEEEEecceEEEcCCCCccccccC
Confidence 999997321 134566655555 44444443 27899999987755432
Q ss_pred ---cchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHH
Q 025672 165 ---YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAAL 241 (249)
Q Consensus 165 ---~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~ 241 (249)
+...|+.+|.+.+.+ ..+.. . ..|++++.|.||++.++......... ..+.+.-......+.+++|+|++++
T Consensus 121 ~~~~~~~y~~~k~~~e~~-~~~~~--~-~~gi~~~ivrp~~v~g~~~~~~~~~~-~~~~~~~~~~~~~~i~~~Dva~~~~ 195 (221)
T 3ew7_A 121 GLREAPYYPTARAQAKQL-EHLKS--H-QAEFSWTYISPSAMFEPGERTGDYQI-GKDHLLFGSDGNSFISMEDYAIAVL 195 (221)
T ss_dssp ----CCCSCCHHHHHHHH-HHHHT--T-TTTSCEEEEECSSCCCCC----------------------CCCHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHH-HHHHh--h-ccCccEEEEeCcceecCCCccCceEe-ccccceecCCCCceEeHHHHHHHHH
Confidence 244599999999887 33332 1 56899999999999875221110000 0000100011124778999999999
Q ss_pred HhccCC
Q 025672 242 YLASDA 247 (249)
Q Consensus 242 ~l~s~~ 247 (249)
.++...
T Consensus 196 ~~l~~~ 201 (221)
T 3ew7_A 196 DEIERP 201 (221)
T ss_dssp HHHHSC
T ss_pred HHHhCc
Confidence 998654
|
| >3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} | Back alignment and structure |
|---|
Probab=99.87 E-value=6.7e-21 Score=158.91 Aligned_cols=194 Identities=14% Similarity=0.065 Sum_probs=143.7
Q ss_pred cEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCccE
Q 025672 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI 92 (249)
Q Consensus 13 k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ 92 (249)
+++|||||+|+||++++++|+++|++|++++|+....+ +. ++.++.+|++ .+++.++++ ++|+
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~--------~~~~~~~Dl~-~~~~~~~~~-------~~d~ 65 (311)
T 3m2p_A 3 LKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA-IN--------DYEYRVSDYT-LEDLINQLN-------DVDA 65 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC--------------CCEEEECCCC-HHHHHHHTT-------TCSE
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc-CC--------ceEEEEcccc-HHHHHHhhc-------CCCE
Confidence 78999999999999999999999999999999844322 11 6889999999 888887765 6999
Q ss_pred EEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC---------
Q 025672 93 LVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT--------- 163 (249)
Q Consensus 93 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~--------- 163 (249)
|||+|+..... +....+++|+.++.++++++... +. .+||++||...+...
T Consensus 66 Vih~a~~~~~~--------~~~~~~~~n~~~~~~ll~a~~~~----~~--------~r~v~~SS~~vyg~~~~~~~~E~~ 125 (311)
T 3m2p_A 66 VVHLAATRGSQ--------GKISEFHDNEILTQNLYDACYEN----NI--------SNIVYASTISAYSDETSLPWNEKE 125 (311)
T ss_dssp EEECCCCCCSS--------SCGGGTHHHHHHHHHHHHHHHHT----TC--------CEEEEEEEGGGCCCGGGCSBCTTS
T ss_pred EEEccccCCCC--------ChHHHHHHHHHHHHHHHHHHHHc----CC--------CEEEEEccHHHhCCCCCCCCCCCC
Confidence 99999975432 34567899999999998888532 22 579999996554321
Q ss_pred --ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcc---------cCCCC
Q 025672 164 --WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAA---------YKFGE 232 (249)
Q Consensus 164 --~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~---------~~~~~ 232 (249)
.+...|+.+|.+.+.+++.++.+ .|++++.+.||.+.++..........+.+......+. ..+..
T Consensus 126 ~~~p~~~Y~~sK~~~E~~~~~~~~~----~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~ 201 (311)
T 3m2p_A 126 LPLPDLMYGVSKLACEHIGNIYSRK----KGLCIKNLRFAHLYGFNEKNNYMINRFFRQAFHGEQLTLHANSVAKREFLY 201 (311)
T ss_dssp CCCCSSHHHHHHHHHHHHHHHHHHH----SCCEEEEEEECEEECSCC--CCHHHHHHHHHHTCCCEEESSBCCCCEEEEE
T ss_pred CCCCCchhHHHHHHHHHHHHHHHHH----cCCCEEEEeeCceeCcCCCCCCHHHHHHHHHHcCCCeEEecCCCeEEceEE
Confidence 23468999999999999998875 3699999999999876543322223333333222221 12456
Q ss_pred HHHHHHHHHHhccCC
Q 025672 233 KWDIAMAALYLASDA 247 (249)
Q Consensus 233 ~~dva~~v~~l~s~~ 247 (249)
.+|+|+++.++++..
T Consensus 202 v~Dva~a~~~~~~~~ 216 (311)
T 3m2p_A 202 AKDAAKSVIYALKQE 216 (311)
T ss_dssp HHHHHHHHHHHTTCT
T ss_pred HHHHHHHHHHHHhcC
Confidence 889999999998764
|
| >1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.87 E-value=2.4e-21 Score=160.06 Aligned_cols=187 Identities=15% Similarity=0.162 Sum_probs=136.5
Q ss_pred CCCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHH
Q 025672 6 KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN 85 (249)
Q Consensus 6 ~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 85 (249)
-..+-..+++|||||+|+||++++++|+++|++|++++|+ .+|++|.++++++++..
T Consensus 6 ~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~---------------------~~Dl~d~~~~~~~~~~~-- 62 (292)
T 1vl0_A 6 IHHHHHHMKILITGANGQLGREIQKQLKGKNVEVIPTDVQ---------------------DLDITNVLAVNKFFNEK-- 62 (292)
T ss_dssp ------CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT---------------------TCCTTCHHHHHHHHHHH--
T ss_pred cccccccceEEEECCCChHHHHHHHHHHhCCCeEEeccCc---------------------cCCCCCHHHHHHHHHhc--
Confidence 3444567999999999999999999999999999999986 26999999999888754
Q ss_pred HhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCc-
Q 025672 86 HFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW- 164 (249)
Q Consensus 86 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~- 164 (249)
++|+|||+||.... +.+.++++..+++|+.++.++++++.+. +.+||++||...+.+..
T Consensus 63 ---~~d~vih~A~~~~~----~~~~~~~~~~~~~nv~~~~~l~~a~~~~-------------~~~iv~~SS~~v~~~~~~ 122 (292)
T 1vl0_A 63 ---KPNVVINCAAHTAV----DKCEEQYDLAYKINAIGPKNLAAAAYSV-------------GAEIVQISTDYVFDGEAK 122 (292)
T ss_dssp ---CCSEEEECCCCCCH----HHHHHCHHHHHHHHTHHHHHHHHHHHHH-------------TCEEEEEEEGGGSCSCCS
T ss_pred ---CCCEEEECCccCCH----HHHhcCHHHHHHHHHHHHHHHHHHHHHc-------------CCeEEEechHHeECCCCC
Confidence 69999999996431 1234667899999999999999998763 14699999976544322
Q ss_pred ----------cchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhc-------c
Q 025672 165 ----------YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMA-------A 227 (249)
Q Consensus 165 ----------~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~-------~ 227 (249)
+...|+.+|.+.+.+++.++. .+..|.|+.+.++ . ... ...+........+ .
T Consensus 123 ~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~--------~~~~lR~~~v~G~-~-~~~-~~~~~~~~~~~~~~~~~~~~~ 191 (292)
T 1vl0_A 123 EPITEFDEVNPQSAYGKTKLEGENFVKALNP--------KYYIVRTAWLYGD-G-NNF-VKTMINLGKTHDELKVVHDQV 191 (292)
T ss_dssp SCBCTTSCCCCCSHHHHHHHHHHHHHHHHCS--------SEEEEEECSEESS-S-SCH-HHHHHHHHHHCSEEEEESSCE
T ss_pred CCCCCCCCCCCccHHHHHHHHHHHHHHhhCC--------CeEEEeeeeeeCC-C-cCh-HHHHHHHHhcCCcEEeecCee
Confidence 356899999999999877542 3667888888754 1 111 1223222222211 2
Q ss_pred cCCCCHHHHHHHHHHhccC
Q 025672 228 YKFGEKWDIAMAALYLASD 246 (249)
Q Consensus 228 ~~~~~~~dva~~v~~l~s~ 246 (249)
..+..++|+|+++++++++
T Consensus 192 ~~~i~v~Dva~~~~~~~~~ 210 (292)
T 1vl0_A 192 GTPTSTVDLARVVLKVIDE 210 (292)
T ss_dssp ECCEEHHHHHHHHHHHHHH
T ss_pred eCCccHHHHHHHHHHHHhc
Confidence 4466799999999999864
|
| >3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=99.87 E-value=2.6e-21 Score=165.20 Aligned_cols=205 Identities=16% Similarity=0.075 Sum_probs=150.2
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHc-CCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCC-CHHHHHHHHHHHHHH
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKH-GAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVR-KREDAVRVVESTINH 86 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~-G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~-~~~~~~~~~~~~~~~ 86 (249)
.++.+++|||||+|+||++++++|+++ |++|++++|+.+..+.+.. ..++.++.+|++ |.++++++++
T Consensus 21 ~m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~-----~~~v~~~~~Dl~~d~~~~~~~~~----- 90 (372)
T 3slg_A 21 SMKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVK-----HERMHFFEGDITINKEWVEYHVK----- 90 (372)
T ss_dssp --CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGG-----STTEEEEECCTTTCHHHHHHHHH-----
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhcc-----CCCeEEEeCccCCCHHHHHHHhc-----
Confidence 467899999999999999999999998 9999999998765443221 357999999999 9999988886
Q ss_pred hCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC---
Q 025672 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT--- 163 (249)
Q Consensus 87 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~--- 163 (249)
.+|+|||+|+..... ...++....+++|+.++.++++++...- .++|++||...+...
T Consensus 91 --~~d~Vih~A~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~~~~-------------~~~v~~SS~~vyg~~~~~ 151 (372)
T 3slg_A 91 --KCDVILPLVAIATPA----TYVKQPLRVFELDFEANLPIVRSAVKYG-------------KHLVFPSTSEVYGMCADE 151 (372)
T ss_dssp --HCSEEEECBCCCCHH----HHHHCHHHHHHHHTTTTHHHHHHHHHHT-------------CEEEEECCGGGGBSCCCS
T ss_pred --cCCEEEEcCccccHH----HHhhCHHHHHHHHHHHHHHHHHHHHHhC-------------CcEEEeCcHHHhCCCCCC
Confidence 489999999965421 1234567788999999999998886542 459999996543221
Q ss_pred ---------------ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCC--------ChHHHHHh
Q 025672 164 ---------------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL--------APEEIRSK 220 (249)
Q Consensus 164 ---------------~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~--------~~~~~~~~ 220 (249)
.+...|+.+|.+.+.+++.++. . |++++.+.|+.+..+...... ....+...
T Consensus 152 ~~~e~~~~~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~----~-g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~ 226 (372)
T 3slg_A 152 QFDPDASALTYGPINKPRWIYACSKQLMDRVIWGYGM----E-GLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGH 226 (372)
T ss_dssp SBCTTTCCEEECCTTCTTHHHHHHHHHHHHHHHHHHT----T-TCEEEEEEECSEECSSCCCTTCSBSCSCHHHHHHHHH
T ss_pred CCCccccccccCCCCCCCCcHHHHHHHHHHHHHHHHH----C-CCCEEEEccccccCCCcccccccccccchHHHHHHHH
Confidence 2334799999999999988874 3 799999999999876533211 11223332
Q ss_pred hhhhhc---------ccCCCCHHHHHHHHHHhccCC
Q 025672 221 ATDYMA---------AYKFGEKWDIAMAALYLASDA 247 (249)
Q Consensus 221 ~~~~~~---------~~~~~~~~dva~~v~~l~s~~ 247 (249)
+....+ ...+...+|+|+++++++...
T Consensus 227 ~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~ 262 (372)
T 3slg_A 227 IVRGENISLVDGGSQKRAFTYVDDGISALMKIIENS 262 (372)
T ss_dssp HHHTCCEEEGGGGCCEEECEEHHHHHHHHHHHHHCG
T ss_pred HHcCCCcEEeCCCceEEEEEEHHHHHHHHHHHHhcc
Confidence 222211 113557899999999998653
|
| >2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=5.3e-21 Score=161.66 Aligned_cols=206 Identities=13% Similarity=0.020 Sum_probs=143.5
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
+.++++++|||||+|+||++++++|+++|++|++++|+........+.+. ...++.++.+|+.+.. +
T Consensus 23 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~------------~ 89 (343)
T 2b69_A 23 MEKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWI-GHENFELINHDVVEPL------------Y 89 (343)
T ss_dssp ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGT-TCTTEEEEECCTTSCC------------C
T ss_pred cccCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccchhhhhhhc-cCCceEEEeCccCChh------------h
Confidence 44678999999999999999999999999999999987543211111111 1346889999999852 4
Q ss_pred CCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc------
Q 025672 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT------ 161 (249)
Q Consensus 88 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~------ 161 (249)
..+|+|||+||...... ..+++...+++|+.++.++++++.+. +.++|++||...+.
T Consensus 90 ~~~d~vih~A~~~~~~~----~~~~~~~~~~~n~~~~~~l~~a~~~~-------------~~~~v~~SS~~v~g~~~~~~ 152 (343)
T 2b69_A 90 IEVDQIYHLASPASPPN----YMYNPIKTLKTNTIGTLNMLGLAKRV-------------GARLLLASTSEVYGDPEVHP 152 (343)
T ss_dssp CCCSEEEECCSCCSHHH----HTTCHHHHHHHHHHHHHHHHHHHHHH-------------TCEEEEEEEGGGGBSCSSSS
T ss_pred cCCCEEEECccccCchh----hhhCHHHHHHHHHHHHHHHHHHHHHh-------------CCcEEEECcHHHhCCCCCCC
Confidence 57999999999643211 11345678899999999999988653 14699999975442
Q ss_pred ----------cCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCC--CChHHHHHhhhhhhc---
Q 025672 162 ----------ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK--LAPEEIRSKATDYMA--- 226 (249)
Q Consensus 162 ----------~~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~--~~~~~~~~~~~~~~~--- 226 (249)
+..+...|+.+|.+.+.+++.++.+. |++++.+.||.+.++..... .....+........+
T Consensus 153 ~~E~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~----~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (343)
T 2b69_A 153 QSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQE----GVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTV 228 (343)
T ss_dssp BCTTCCCBCCSSSTTHHHHHHHHHHHHHHHHHHHHH----CCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEE
T ss_pred CcccccccCCCCCCCCchHHHHHHHHHHHHHHHHHh----CCcEEEEEEcceeCcCCCCCcccHHHHHHHHHHcCCCceE
Confidence 22345679999999999999998764 59999999999987643221 111222222222111
Q ss_pred ------ccCCCCHHHHHHHHHHhccCC
Q 025672 227 ------AYKFGEKWDIAMAALYLASDA 247 (249)
Q Consensus 227 ------~~~~~~~~dva~~v~~l~s~~ 247 (249)
...+...+|+|+++++++...
T Consensus 229 ~~~~~~~~~~v~v~Dva~a~~~~~~~~ 255 (343)
T 2b69_A 229 YGSGSQTRAFQYVSDLVNGLVALMNSN 255 (343)
T ss_dssp ESSSCCEEECEEHHHHHHHHHHHHTSS
T ss_pred cCCCCeEEeeEeHHHHHHHHHHHHhcC
Confidence 123558999999999988653
|
| >2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} | Back alignment and structure |
|---|
Probab=99.86 E-value=1.5e-20 Score=156.55 Aligned_cols=201 Identities=13% Similarity=-0.027 Sum_probs=147.3
Q ss_pred CcEEEEecCCCchhHHHHHHHHHc--CCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCC
Q 025672 12 GKVALLTGGGSGIGFEISLQLGKH--GAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK 89 (249)
Q Consensus 12 ~k~~lItGa~~giG~~~a~~l~~~--G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 89 (249)
++++|||||+|+||++++++|+++ |++|++++|+....+ +. .++.++.+|++|.+++++++++. +
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-----~~---~~~~~~~~D~~d~~~~~~~~~~~-----~ 68 (312)
T 2yy7_A 2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTD-----VV---NSGPFEVVNALDFNQIEHLVEVH-----K 68 (312)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCH-----HH---HSSCEEECCTTCHHHHHHHHHHT-----T
T ss_pred CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcccc-----cc---CCCceEEecCCCHHHHHHHHhhc-----C
Confidence 477999999999999999999999 899999999876522 11 14678999999999999888753 6
Q ss_pred ccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC------
Q 025672 90 LDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT------ 163 (249)
Q Consensus 90 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~------ 163 (249)
+|+|||+||..... ..+++...+++|+.++.++++++.+ .+ .++||++||...+...
T Consensus 69 ~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~----~~--------~~~~v~~SS~~~~~~~~~~~~~ 131 (312)
T 2yy7_A 69 ITDIYLMAALLSAT-----AEKNPAFAWDLNMNSLFHVLNLAKA----KK--------IKKIFWPSSIAVFGPTTPKENT 131 (312)
T ss_dssp CCEEEECCCCCHHH-----HHHCHHHHHHHHHHHHHHHHHHHHT----TS--------CSEEECCEEGGGCCTTSCSSSB
T ss_pred CCEEEECCccCCCc-----hhhChHHHHHHHHHHHHHHHHHHHH----cC--------CCEEEEeccHHHhCCCCCCCCc
Confidence 99999999964321 2355778899999999999998864 22 1679999998655331
Q ss_pred ------ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCC-----ChHHHHHhhhhh-hc-----
Q 025672 164 ------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL-----APEEIRSKATDY-MA----- 226 (249)
Q Consensus 164 ------~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~-----~~~~~~~~~~~~-~~----- 226 (249)
.+...|+.+|.+.+.+++.++.++ |++++.+.||.+..+...... ....+.+.+... .+
T Consensus 132 ~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~----~~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (312)
T 2yy7_A 132 PQYTIMEPSTVYGISKQAGERWCEYYHNIY----GVDVRSIRYPGLISWSTPPGGGTTDYAVDIFYKAIADKKYECFLSS 207 (312)
T ss_dssp CSSCBCCCCSHHHHHHHHHHHHHHHHHHHH----CCEEECEEECEEECSSSCCCSCTTTHHHHHHHHHHHTSEEEESSCT
T ss_pred cccCcCCCCchhHHHHHHHHHHHHHHHHhc----CCcEEEEeCCeEecCCCCCCCchhhhHHHHHHHHHcCCCeEEecCC
Confidence 235689999999999999988765 599999999999865322211 111222222211 11
Q ss_pred --ccCCCCHHHHHHHHHHhccC
Q 025672 227 --AYKFGEKWDIAMAALYLASD 246 (249)
Q Consensus 227 --~~~~~~~~dva~~v~~l~s~ 246 (249)
...+...+|+|+++..++..
T Consensus 208 ~~~~~~i~v~Dva~a~~~~~~~ 229 (312)
T 2yy7_A 208 ETKMPMMYMDDAIDATINIMKA 229 (312)
T ss_dssp TCCEEEEEHHHHHHHHHHHHHS
T ss_pred CceeeeeeHHHHHHHHHHHHhC
Confidence 11234679999999998854
|
| >2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A | Back alignment and structure |
|---|
Probab=99.86 E-value=7e-21 Score=160.69 Aligned_cols=201 Identities=14% Similarity=0.020 Sum_probs=145.2
Q ss_pred cEEEEecCCCchhHHHHHHHHHc-CCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCH-HHHHHHHHHHHHHhCCc
Q 025672 13 KVALLTGGGSGIGFEISLQLGKH-GAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKR-EDAVRVVESTINHFGKL 90 (249)
Q Consensus 13 k~~lItGa~~giG~~~a~~l~~~-G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~~~~i 90 (249)
+++|||||+|+||++++++|+++ |++|++++|+..+.+.+. ...++.++.+|++|. +.++++++ .+
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~~-------~~ 68 (345)
T 2bll_A 1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL-----NHPHFHFVEGDISIHSEWIEYHVK-------KC 68 (345)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGT-----TCTTEEEEECCTTTCSHHHHHHHH-------HC
T ss_pred CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhh-----cCCCeEEEeccccCcHHHHHhhcc-------CC
Confidence 47999999999999999999998 899999999876543321 134688999999984 56766664 47
Q ss_pred cEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC-------
Q 025672 91 DILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT------- 163 (249)
Q Consensus 91 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~------- 163 (249)
|+|||+||..... ...+++...+++|+.++.++++++.+. +.+||++||...+...
T Consensus 69 d~vih~A~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~-------------~~~~v~~SS~~v~g~~~~~~~~e 131 (345)
T 2bll_A 69 DVVLPLVAIATPI----EYTRNPLRVFELDFEENLRIIRYCVKY-------------RKRIIFPSTSEVYGMCSDKYFDE 131 (345)
T ss_dssp SEEEECBCCCCHH----HHHHSHHHHHHHHTHHHHHHHHHHHHT-------------TCEEEEECCGGGGBTCCCSSBCT
T ss_pred CEEEEcccccCcc----chhcCHHHHHHHHHHHHHHHHHHHHHh-------------CCeEEEEecHHHcCCCCCCCcCC
Confidence 9999999964321 112456788999999999998887542 1569999997654221
Q ss_pred -----------ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCC----C----hHHHHHhhhhh
Q 025672 164 -----------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL----A----PEEIRSKATDY 224 (249)
Q Consensus 164 -----------~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~----~----~~~~~~~~~~~ 224 (249)
.+...|+.+|.+.+.+++.++.++ |++++.+.||.+.++...... . ...+.......
T Consensus 132 ~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~----~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (345)
T 2bll_A 132 DHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKE----GLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEG 207 (345)
T ss_dssp TTCCCBCCCTTCGGGHHHHHHHHHHHHHHHHHHHH----CCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHT
T ss_pred cccccccCcccCcccccHHHHHHHHHHHHHHHHhc----CCCEEEEcCCcccCCCcccccccccccccHHHHHHHHHHcC
Confidence 122379999999999999998765 599999999999876532210 0 12222222222
Q ss_pred hc---------ccCCCCHHHHHHHHHHhccC
Q 025672 225 MA---------AYKFGEKWDIAMAALYLASD 246 (249)
Q Consensus 225 ~~---------~~~~~~~~dva~~v~~l~s~ 246 (249)
.+ ...+..++|+|++++++++.
T Consensus 208 ~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~ 238 (345)
T 2bll_A 208 SPIKLIDGGKQKRCFTDIRDGIEALYRIIEN 238 (345)
T ss_dssp CCEEEGGGSCCEEECEEHHHHHHHHHHHHHC
T ss_pred CCcEEECCCCEEEEEEEHHHHHHHHHHHHhh
Confidence 11 12366899999999999864
|
| >2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.86 E-value=9.9e-23 Score=160.95 Aligned_cols=189 Identities=14% Similarity=0.064 Sum_probs=139.0
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCC--eEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhC
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGA--AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~--~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 88 (249)
.+++++||||+|+||++++++|+++|+ +|++++|+... ...++.++.+|++|++++++++
T Consensus 4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~----------~~~~~~~~~~D~~~~~~~~~~~-------- 65 (215)
T 2a35_A 4 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA----------EHPRLDNPVGPLAELLPQLDGS-------- 65 (215)
T ss_dssp CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC----------CCTTEECCBSCHHHHGGGCCSC--------
T ss_pred CCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc----------cCCCceEEeccccCHHHHHHhh--------
Confidence 468999999999999999999999998 99999998764 1346888999999887766554
Q ss_pred CccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchh
Q 025672 89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH 168 (249)
Q Consensus 89 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~ 168 (249)
+|+|||++|.... +.++++..+++|+.++.++++++.+. + .++||++||...... +...
T Consensus 66 -~d~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~----~--------~~~~v~~Ss~~~~~~--~~~~ 124 (215)
T 2a35_A 66 -IDTAFCCLGTTIK------EAGSEEAFRAVDFDLPLAVGKRALEM----G--------ARHYLVVSALGADAK--SSIF 124 (215)
T ss_dssp -CSEEEECCCCCHH------HHSSHHHHHHHHTHHHHHHHHHHHHT----T--------CCEEEEECCTTCCTT--CSSH
T ss_pred -hcEEEECeeeccc------cCCCHHHHHHhhHHHHHHHHHHHHHc----C--------CCEEEEECCcccCCC--CccH
Confidence 8999999996431 23567888999999999999887542 2 267999999876643 3457
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCCCeE-EEEEecCccccccccCCCChHHHHHhhhhhhc-ccCCCCHHHHHHHHHHhccC
Q 025672 169 VSAAKAAVDSITRSLALEWGTDYAIR-VNGIAPGPIKDTAGVSKLAPEEIRSKATDYMA-AYKFGEKWDIAMAALYLASD 246 (249)
Q Consensus 169 y~~sK~a~~~l~~~la~e~~~~~gi~-v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~dva~~v~~l~s~ 246 (249)
|+.+|.+++.+++. .|++ ++.|.||++.++....... +.+........+ ...+.+++|+|+++..++.+
T Consensus 125 y~~sK~~~e~~~~~--------~~~~~~~~vrp~~v~g~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~ 195 (215)
T 2a35_A 125 YNRVKGELEQALQE--------QGWPQLTIARPSLLFGPREEFRLA-EILAAPIARILPGKYHGIEACDLARALWRLALE 195 (215)
T ss_dssp HHHHHHHHHHHHTT--------SCCSEEEEEECCSEESTTSCEEGG-GGTTCCCC----CHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHH--------cCCCeEEEEeCceeeCCCCcchHH-HHHHHhhhhccCCCcCcEeHHHHHHHHHHHHhc
Confidence 99999999888743 3798 9999999998764321110 010000000000 12356789999999999875
Q ss_pred C
Q 025672 247 A 247 (249)
Q Consensus 247 ~ 247 (249)
.
T Consensus 196 ~ 196 (215)
T 2a35_A 196 E 196 (215)
T ss_dssp C
T ss_pred C
Confidence 4
|
| >4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.85 E-value=1.6e-20 Score=165.62 Aligned_cols=171 Identities=18% Similarity=0.056 Sum_probs=129.4
Q ss_pred CCCCCCCcEEEEecCCCchhHHHHHHHHHc---CCeEEEEeCCcchHHHHHHHHH---------------hcCCCeeEEE
Q 025672 6 KGDILKGKVALLTGGGSGIGFEISLQLGKH---GAAIAIMGRRKTVLRSAVAALH---------------SLGIPAIGLE 67 (249)
Q Consensus 6 ~~~~l~~k~~lItGa~~giG~~~a~~l~~~---G~~v~l~~r~~~~~~~~~~~~~---------------~~~~~~~~~~ 67 (249)
.....++|+||||||+|+||++++++|+++ |++|++++|+.+.......... ....++.++.
T Consensus 67 ~~~~~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~ 146 (478)
T 4dqv_A 67 PGPSPELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVA 146 (478)
T ss_dssp CCCCSCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEE
T ss_pred CCCCCCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEE
Confidence 345577999999999999999999999999 9999999998765432221111 1235899999
Q ss_pred ccCC------CHHHHHHHHHHHHHHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCC
Q 025672 68 GDVR------KREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRG 141 (249)
Q Consensus 68 ~Dl~------~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ 141 (249)
+|++ |.++++.+++ ++|+||||||.... +.+...+++|+.++.++++++.. .+
T Consensus 147 ~Dl~~~~~gld~~~~~~~~~-------~~D~Vih~Aa~~~~--------~~~~~~~~~Nv~gt~~ll~aa~~----~~-- 205 (478)
T 4dqv_A 147 GDKSEPDLGLDQPMWRRLAE-------TVDLIVDSAAMVNA--------FPYHELFGPNVAGTAELIRIALT----TK-- 205 (478)
T ss_dssp CCTTSGGGGCCHHHHHHHHH-------HCCEEEECCSSCSB--------SSCCEEHHHHHHHHHHHHHHHTS----SS--
T ss_pred eECCCcccCCCHHHHHHHHc-------CCCEEEECccccCC--------cCHHHHHHHHHHHHHHHHHHHHh----CC--
Confidence 9999 5566776665 48999999997543 23456789999999999988753 21
Q ss_pred CCCCCCCceEEEeccccccccCcc----------------------chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEe
Q 025672 142 QASSSSGGIIINISATLHYTATWY----------------------QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIA 199 (249)
Q Consensus 142 ~~~~~~~g~iv~iss~~~~~~~~~----------------------~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~ 199 (249)
..+||++||...+..... ...|+.+|.+.+.+++.++.+. |++++.|.
T Consensus 206 ------~~~~V~iSS~~v~~~~~~~~~~E~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~----gi~~~ivR 275 (478)
T 4dqv_A 206 ------LKPFTYVSTADVGAAIEPSAFTEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLC----ALPVAVFR 275 (478)
T ss_dssp ------CCCEEEEEEGGGGTTSCTTTCCSSSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHH----CCCEEEEE
T ss_pred ------CCeEEEEeehhhcCccCCCCcCCcccccccCcccccccccccchHHHHHHHHHHHHHHHHHh----CCCeEEEE
Confidence 156999999654322110 1339999999999999988764 59999999
Q ss_pred cCcccccc
Q 025672 200 PGPIKDTA 207 (249)
Q Consensus 200 pG~v~t~~ 207 (249)
||.|..+.
T Consensus 276 pg~v~G~~ 283 (478)
T 4dqv_A 276 CGMILADT 283 (478)
T ss_dssp ECEEECCS
T ss_pred CceeeCCC
Confidence 99998653
|
| >2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=99.85 E-value=1.2e-20 Score=154.23 Aligned_cols=183 Identities=16% Similarity=0.101 Sum_probs=132.9
Q ss_pred EEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCccEE
Q 025672 14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDIL 93 (249)
Q Consensus 14 ~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~v 93 (249)
+++||||+|+||++++++|+ +|++|++++|+... + . . +.+|++|+++++++++.. ++|+|
T Consensus 2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~~-~--------~--~---~~~Dl~~~~~~~~~~~~~-----~~d~v 61 (273)
T 2ggs_A 2 RTLITGASGQLGIELSRLLS-ERHEVIKVYNSSEI-Q--------G--G---YKLDLTDFPRLEDFIIKK-----RPDVI 61 (273)
T ss_dssp CEEEETTTSHHHHHHHHHHT-TTSCEEEEESSSCC-T--------T--C---EECCTTSHHHHHHHHHHH-----CCSEE
T ss_pred EEEEECCCChhHHHHHHHHh-cCCeEEEecCCCcC-C--------C--C---ceeccCCHHHHHHHHHhc-----CCCEE
Confidence 58999999999999999999 58999999998742 1 1 1 789999999999998765 69999
Q ss_pred EEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCc---------
Q 025672 94 VNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW--------- 164 (249)
Q Consensus 94 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~--------- 164 (249)
|||||.... +.+.++++..+++|+.++.++++++.+ . +++||++||...+.+.+
T Consensus 62 i~~a~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~~----~---------~~~iv~~SS~~~~~~~~~~~~e~~~~ 124 (273)
T 2ggs_A 62 INAAAMTDV----DKCEIEKEKAYKINAEAVRHIVRAGKV----I---------DSYIVHISTDYVFDGEKGNYKEEDIP 124 (273)
T ss_dssp EECCCCCCH----HHHHHCHHHHHHHHTHHHHHHHHHHHH----T---------TCEEEEEEEGGGSCSSSCSBCTTSCC
T ss_pred EECCcccCh----hhhhhCHHHHHHHhHHHHHHHHHHHHH----h---------CCeEEEEecceeEcCCCCCcCCCCCC
Confidence 999996432 123467889999999999999999864 1 25799999987765432
Q ss_pred -cchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhc------ccCCCCHHHHH
Q 025672 165 -YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMA------AYKFGEKWDIA 237 (249)
Q Consensus 165 -~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~dva 237 (249)
+...|+.+|.+++.+++. +. ...||++.|. | .+ . ....+.+......+ ..++.+++|+|
T Consensus 125 ~~~~~Y~~sK~~~e~~~~~----~~-~~~iR~~~v~-G--~~-----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva 190 (273)
T 2ggs_A 125 NPINYYGLSKLLGETFALQ----DD-SLIIRTSGIF-R--NK-----G-FPIYVYKTLKEGKTVFAFKGYYSPISARKLA 190 (273)
T ss_dssp CCSSHHHHHHHHHHHHHCC----TT-CEEEEECCCB-S--SS-----S-HHHHHHHHHHTTCCEEEESCEECCCBHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhC----CC-eEEEeccccc-c--cc-----H-HHHHHHHHHHcCCCEEeecCCCCceEHHHHH
Confidence 256899999999999877 22 2234444444 3 11 1 11122222211111 34678999999
Q ss_pred HHHHHhccCC
Q 025672 238 MAALYLASDA 247 (249)
Q Consensus 238 ~~v~~l~s~~ 247 (249)
+++.+++++.
T Consensus 191 ~~i~~~~~~~ 200 (273)
T 2ggs_A 191 SAILELLELR 200 (273)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHhcC
Confidence 9999998653
|
| >1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 | Back alignment and structure |
|---|
Probab=99.84 E-value=4e-20 Score=170.20 Aligned_cols=176 Identities=16% Similarity=0.080 Sum_probs=131.9
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHh-cCCCeeEEEccCCCHHHHHHHHHHHHHH
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHS-LGIPAIGLEGDVRKREDAVRVVESTINH 86 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 86 (249)
+.+++|++|||||+|+||++++++|+++|++|++++|+........+.+.. .+.++.++.+|++|.+++++++++.
T Consensus 7 ~~~~~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~v~~v~~Dl~d~~~l~~~~~~~--- 83 (699)
T 1z45_A 7 SESTSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEY--- 83 (699)
T ss_dssp ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHS---
T ss_pred cccCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhccCCceEEEEcCCCCHHHHHHHHHhC---
Confidence 456789999999999999999999999999999999876543322223321 2456889999999999999888653
Q ss_pred hCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc----
Q 025672 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA---- 162 (249)
Q Consensus 87 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~---- 162 (249)
++|+|||+||...... ..+.....+++|+.++.++++++... +. ++||++||...+..
T Consensus 84 --~~D~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~~----~~--------~~iV~~SS~~vyg~~~~~ 145 (699)
T 1z45_A 84 --KIDSVIHFAGLKAVGE----STQIPLRYYHNNILGTVVLLELMQQY----NV--------SKFVFSSSATVYGDATRF 145 (699)
T ss_dssp --CCCEEEECCSCCCHHH----HHHSHHHHHHHHHHHHHHHHHHHHHH----TC--------CEEEEEEEGGGGCCGGGS
T ss_pred --CCCEEEECCcccCcCc----cccCHHHHHHHHHHHHHHHHHHHHHc----CC--------CEEEEECcHHHhCCCccc
Confidence 6999999999643211 12334668899999999998776532 22 67999999765421
Q ss_pred -----------CccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccc
Q 025672 163 -----------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDT 206 (249)
Q Consensus 163 -----------~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~ 206 (249)
..+...|+.+|.+++.+++.++.+. ..|+++..+.|+.+..+
T Consensus 146 ~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~g~~~~ilR~~~vyG~ 198 (699)
T 1z45_A 146 PNMIPIPEECPLGPTNPYGHTKYAIENILNDLYNSD--KKSWKFAILRYFNPIGA 198 (699)
T ss_dssp TTCCSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHS--TTSCEEEEEEECEEECC
T ss_pred cccCCccccCCCCCCChHHHHHHHHHHHHHHHHHhc--cCCCcEEEEEeccccCC
Confidence 1134689999999999999998874 35899999999988754
|
| >1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=4.5e-20 Score=154.39 Aligned_cols=192 Identities=14% Similarity=0.064 Sum_probs=141.2
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCc
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 90 (249)
.++++|||||+|+||++++++|+++|++|++++|+. .+|++|.+++++++++. ++
T Consensus 2 ~~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~--------------------~~D~~d~~~~~~~~~~~-----~~ 56 (321)
T 1e6u_A 2 AKQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD--------------------ELNLLDSRAVHDFFASE-----RI 56 (321)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT--------------------TCCTTCHHHHHHHHHHH-----CC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCc--------------------cCCccCHHHHHHHHHhc-----CC
Confidence 368999999999999999999999999999988763 26999999999888754 69
Q ss_pred cEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc--------
Q 025672 91 DILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA-------- 162 (249)
Q Consensus 91 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~-------- 162 (249)
|+|||+|+..... ....++....+++|+.++.++++++.+. +. .++|++||...+..
T Consensus 57 d~vih~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~--------~~~v~~SS~~vyg~~~~~~~~E 121 (321)
T 1e6u_A 57 DQVYLAAAKVGGI---VANNTYPADFIYQNMMIESNIIHAAHQN----DV--------NKLLFLGSSCIYPKLAKQPMAE 121 (321)
T ss_dssp SEEEECCCCCCCH---HHHHHCHHHHHHHHHHHHHHHHHHHHHT----TC--------CEEEEECCGGGSCTTCCSSBCG
T ss_pred CEEEEcCeecCCc---chhhhCHHHHHHHHHHHHHHHHHHHHHh----CC--------CeEEEEccHHHcCCCCCCCcCc
Confidence 9999999964311 1123456788999999999999888642 21 57999999765421
Q ss_pred --------CccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCC----CChHHHHHhhhh-------
Q 025672 163 --------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK----LAPEEIRSKATD------- 223 (249)
Q Consensus 163 --------~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~----~~~~~~~~~~~~------- 223 (249)
.+....|+.+|.+.+.+++.++.++ |++++.+.||++..+..... .....+...+..
T Consensus 122 ~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~----~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 197 (321)
T 1e6u_A 122 SELLQGTLEPTNEPYAIAKIAGIKLCESYNRQY----GRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAP 197 (321)
T ss_dssp GGTTSSCCCGGGHHHHHHHHHHHHHHHHHHHHH----CCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCS
T ss_pred cccccCCCCCCCCccHHHHHHHHHHHHHHHHHh----CCCEEEEEeCCcCCcCCCCCCCCCccHHHHHHHHHHhhhcCCC
Confidence 1123589999999999999998764 59999999999997644321 111233332221
Q ss_pred hhc-------ccCCCCHHHHHHHHHHhccC
Q 025672 224 YMA-------AYKFGEKWDIAMAALYLASD 246 (249)
Q Consensus 224 ~~~-------~~~~~~~~dva~~v~~l~s~ 246 (249)
.++ ...+...+|+|+++..++..
T Consensus 198 ~~~~~~~g~~~~~~i~v~Dva~~~~~~~~~ 227 (321)
T 1e6u_A 198 DVVVWGSGTPMREFLHVDDMAAASIHVMEL 227 (321)
T ss_dssp EEEEESCSCCEECEEEHHHHHHHHHHHHHS
T ss_pred ceEEcCCCCEEEEeEEHHHHHHHHHHHHhC
Confidence 111 11244789999999998854
|
| >1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1 | Back alignment and structure |
|---|
Probab=99.84 E-value=3.1e-20 Score=169.93 Aligned_cols=205 Identities=14% Similarity=0.034 Sum_probs=148.3
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHc-CCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHH-HHHHHHHHHHH
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKH-GAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKRED-AVRVVESTINH 86 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~-G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~-~~~~~~~~~~~ 86 (249)
.++++++|||||+|+||++++++|+++ |++|++++|+....+.+. ...++.++.+|++|.++ ++.+++
T Consensus 312 ~~~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~~~-----~~~~v~~v~~Dl~d~~~~~~~~~~----- 381 (660)
T 1z7e_A 312 ARRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL-----NHPHFHFVEGDISIHSEWIEYHVK----- 381 (660)
T ss_dssp --CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGGGT-----TCTTEEEEECCTTTCHHHHHHHHH-----
T ss_pred hccCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhhhc-----cCCceEEEECCCCCcHHHHHHhhc-----
Confidence 357899999999999999999999998 899999999876543221 13578899999999765 555554
Q ss_pred hCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC---
Q 025672 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT--- 163 (249)
Q Consensus 87 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~--- 163 (249)
.+|+|||+||..... ...+++...+++|+.++.++++++.+. +.++|++||...+...
T Consensus 382 --~~D~Vih~Aa~~~~~----~~~~~~~~~~~~Nv~gt~~ll~aa~~~-------------~~r~V~~SS~~vyg~~~~~ 442 (660)
T 1z7e_A 382 --KCDVVLPLVAIATPI----EYTRNPLRVFELDFEENLRIIRYCVKY-------------RKRIIFPSTSEVYGMCSDK 442 (660)
T ss_dssp --HCSEEEECCCCCCTH----HHHHSHHHHHHHHTHHHHHHHHHHHHT-------------TCEEEEECCGGGGBTCCSS
T ss_pred --CCCEEEECceecCcc----ccccCHHHHHHhhhHHHHHHHHHHHHh-------------CCEEEEEecHHHcCCCCCc
Confidence 489999999964321 123456788999999999998888642 1569999997654221
Q ss_pred ---------------ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccC--------CCChHHHHHh
Q 025672 164 ---------------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVS--------KLAPEEIRSK 220 (249)
Q Consensus 164 ---------------~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~--------~~~~~~~~~~ 220 (249)
.+...|+.+|.+.+.+++.++.++ |++++.+.||.+.++.... ......+...
T Consensus 443 ~~~E~~~~~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~~----gi~~~ilRpg~v~Gp~~~~~~~~~~~~~~~~~~~~~~ 518 (660)
T 1z7e_A 443 YFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKE----GLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILN 518 (660)
T ss_dssp SBCTTTCCEEECCTTCTTHHHHHHHHHHHHHHHHHHHHH----CCCEEEEEECSEESTTSSCHHHHTTTCSCHHHHHHHH
T ss_pred ccCCCccccccCcccCCCCCcHHHHHHHHHHHHHHHHHc----CCCEEEECCCcccCCCccccccccccccchHHHHHHH
Confidence 123379999999999999998765 5999999999998764321 1111223332
Q ss_pred hhhhhcc---------cCCCCHHHHHHHHHHhccC
Q 025672 221 ATDYMAA---------YKFGEKWDIAMAALYLASD 246 (249)
Q Consensus 221 ~~~~~~~---------~~~~~~~dva~~v~~l~s~ 246 (249)
.....+. ..+.+++|+|++++++++.
T Consensus 519 ~~~g~~~~~~g~g~~~~~~i~v~Dva~ai~~~l~~ 553 (660)
T 1z7e_A 519 LVEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIEN 553 (660)
T ss_dssp HHHTCCEEEEGGGCCEEECEEHHHHHHHHHHHHHC
T ss_pred HHcCCCcEEeCCCCeEEEEEEHHHHHHHHHHHHhC
Confidence 2222221 2356799999999999864
|
| >3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=8e-20 Score=152.58 Aligned_cols=196 Identities=15% Similarity=0.055 Sum_probs=141.5
Q ss_pred EEEEecCCCchhHHHHHHHHHc--CCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCcc
Q 025672 14 VALLTGGGSGIGFEISLQLGKH--GAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD 91 (249)
Q Consensus 14 ~~lItGa~~giG~~~a~~l~~~--G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 91 (249)
++|||||+|+||++++++|+++ |++|++++|+....+ .+.++.+|++|.+++++++++. ++|
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-----------~~~~~~~D~~d~~~~~~~~~~~-----~~d 64 (317)
T 3ajr_A 1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDTG-----------GIKFITLDVSNRDEIDRAVEKY-----SID 64 (317)
T ss_dssp CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCCT-----------TCCEEECCTTCHHHHHHHHHHT-----TCC
T ss_pred CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCcccc-----------CceEEEecCCCHHHHHHHHhhc-----CCc
Confidence 4899999999999999999999 889999998765421 4678999999999999888742 699
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC--------
Q 025672 92 ILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT-------- 163 (249)
Q Consensus 92 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~-------- 163 (249)
+|||+|+.... ...++++..+++|+.++.++++++.+. + .++||++||...+.+.
T Consensus 65 ~vih~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~a~~~~----~--------~~~~v~~SS~~~~~~~~~~~~~~e 127 (317)
T 3ajr_A 65 AIFHLAGILSA-----KGEKDPALAYKVNMNGTYNILEAAKQH----R--------VEKVVIPSTIGVFGPETPKNKVPS 127 (317)
T ss_dssp EEEECCCCCHH-----HHHHCHHHHHHHHHHHHHHHHHHHHHT----T--------CCEEEEEEEGGGCCTTSCSSSBCS
T ss_pred EEEECCcccCC-----ccccChHHHhhhhhHHHHHHHHHHHHc----C--------CCEEEEecCHHHhCCCCCCCCccc
Confidence 99999996431 123557788999999999999987642 2 1679999998765432
Q ss_pred ----ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCC-----ChHHHHHhhhhh-hc-------
Q 025672 164 ----WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL-----APEEIRSKATDY-MA------- 226 (249)
Q Consensus 164 ----~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~-----~~~~~~~~~~~~-~~------- 226 (249)
.+...|+.+|.+.+.+++.++.++ |++++.+.|+.+..+...... ....+.+..... .+
T Consensus 128 ~~~~~p~~~Y~~sK~~~e~~~~~~~~~~----~~~~~~lR~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (317)
T 3ajr_A 128 ITITRPRTMFGVTKIAAELLGQYYYEKF----GLDVRSLRYPGIISYKAEPTAGTTDYAVEIFYYAVKREKYKCYLAPNR 203 (317)
T ss_dssp SSCCCCCSHHHHHHHHHHHHHHHHHHHH----CCEEEEEEECEEECSSSCCCSCSSTHHHHHHHHHHTTCCEEECSCTTC
T ss_pred cccCCCCchHHHHHHHHHHHHHHHHHhc----CCeEEEEecCcEeccCCCCCCcchhHHHHHHHHHHhCCCceeecCccc
Confidence 135689999999999999888654 699999987776654321111 011122222111 11
Q ss_pred ccCCCCHHHHHHHHHHhccC
Q 025672 227 AYKFGEKWDIAMAALYLASD 246 (249)
Q Consensus 227 ~~~~~~~~dva~~v~~l~s~ 246 (249)
...+...+|++++++.++..
T Consensus 204 ~~~~i~v~Dva~a~~~~l~~ 223 (317)
T 3ajr_A 204 ALPMMYMPDALKALVDLYEA 223 (317)
T ss_dssp CEEEEEHHHHHHHHHHHHHC
T ss_pred eeeeeEHHHHHHHHHHHHhC
Confidence 01134679999999887743
|
| >1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.83 E-value=6.2e-20 Score=152.61 Aligned_cols=201 Identities=14% Similarity=0.118 Sum_probs=141.1
Q ss_pred EEEEecCCCchhHHHHHHHHHcC-CeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCccE
Q 025672 14 VALLTGGGSGIGFEISLQLGKHG-AAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI 92 (249)
Q Consensus 14 ~~lItGa~~giG~~~a~~l~~~G-~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ 92 (249)
++|||||+|+||++++++|+++| ++|++++|+..... ...+.. +. +.+|++|.+.++.+++... ++++|+
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~~~~~~----~~-~~~d~~~~~~~~~~~~~~~--~~~~d~ 71 (310)
T 1eq2_A 1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK--FVNLVD----LN-IADYMDKEDFLIQIMAGEE--FGDVEA 71 (310)
T ss_dssp CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGG--GHHHHT----SC-CSEEEEHHHHHHHHHTTCC--CSSCCE
T ss_pred CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCch--hhhcCc----ce-eccccccHHHHHHHHhccc--cCCCcE
Confidence 48999999999999999999999 89999998765421 111211 22 6789999988887765210 236999
Q ss_pred EEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC---------
Q 025672 93 LVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT--------- 163 (249)
Q Consensus 93 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~--------- 163 (249)
|||+||.... ..+++...+++|+.++.++++++.+.- .++|++||...+...
T Consensus 72 vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~a~~~~~-------------~~~v~~SS~~v~g~~~~~~~~E~~ 132 (310)
T 1eq2_A 72 IFHEGACSST------TEWDGKYMMDNNYQYSKELLHYCLERE-------------IPFLYASSAATYGGRTSDFIESRE 132 (310)
T ss_dssp EEECCSCCCT------TCCCHHHHHHHTHHHHHHHHHHHHHHT-------------CCEEEEEEGGGGTTCCSCBCSSGG
T ss_pred EEECcccccC------cccCHHHHHHHHHHHHHHHHHHHHHcC-------------CeEEEEeeHHHhCCCCCCCCCCCC
Confidence 9999996542 234567889999999999999987541 259999998654322
Q ss_pred --ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCC----CChHHHHHhhhhhh---------c-c
Q 025672 164 --WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK----LAPEEIRSKATDYM---------A-A 227 (249)
Q Consensus 164 --~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~----~~~~~~~~~~~~~~---------~-~ 227 (249)
.+...|+.+|.+.+.+++.++.+ .|++++.+.||++.++..... .....+.+...... . .
T Consensus 133 ~~~p~~~Y~~sK~~~e~~~~~~~~~----~g~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 208 (310)
T 1eq2_A 133 YEKPLNVYGYSKFLFDEYVRQILPE----ANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFK 208 (310)
T ss_dssp GCCCSSHHHHHHHHHHHHHHHHGGG----CSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------C
T ss_pred CCCCCChhHHHHHHHHHHHHHHHHH----cCCCEEEEeCCcEECcCCCCCCccchHHHHHHHHHHcCCCcEEecCCCcce
Confidence 12557999999999999988754 479999999999987643211 11122222211111 1 2
Q ss_pred cCCCCHHHHHHHHHHhccC
Q 025672 228 YKFGEKWDIAMAALYLASD 246 (249)
Q Consensus 228 ~~~~~~~dva~~v~~l~s~ 246 (249)
..+...+|+|+++++++..
T Consensus 209 ~~~i~v~Dva~~~~~~~~~ 227 (310)
T 1eq2_A 209 RDFVYVGDVADVNLWFLEN 227 (310)
T ss_dssp BCEEEHHHHHHHHHHHHHH
T ss_pred EccEEHHHHHHHHHHHHhc
Confidence 2346789999999998864
|
| >3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.83 E-value=7.1e-20 Score=150.87 Aligned_cols=182 Identities=13% Similarity=0.082 Sum_probs=136.0
Q ss_pred cEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCccE
Q 025672 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI 92 (249)
Q Consensus 13 k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ 92 (249)
+++|||||+|+||++++++|+++|++|++++|. ++|++|.+++.++++.. ++|+
T Consensus 6 m~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~---------------------~~D~~d~~~~~~~~~~~-----~~d~ 59 (287)
T 3sc6_A 6 ERVIITGANGQLGKQLQEELNPEEYDIYPFDKK---------------------LLDITNISQVQQVVQEI-----RPHI 59 (287)
T ss_dssp EEEEEESTTSHHHHHHHHHSCTTTEEEEEECTT---------------------TSCTTCHHHHHHHHHHH-----CCSE
T ss_pred eEEEEECCCCHHHHHHHHHHHhCCCEEEEeccc---------------------ccCCCCHHHHHHHHHhc-----CCCE
Confidence 389999999999999999999999999999982 36999999999998865 6999
Q ss_pred EEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC---------
Q 025672 93 LVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT--------- 163 (249)
Q Consensus 93 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~--------- 163 (249)
|||+||..... ...+++...+++|+.++.++++++.+. +.++|++||...+.+.
T Consensus 60 vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~-------------~~~~v~~SS~~vy~~~~~~~~~E~~ 122 (287)
T 3sc6_A 60 IIHCAAYTKVD----QAEKERDLAYVINAIGARNVAVASQLV-------------GAKLVYISTDYVFQGDRPEGYDEFH 122 (287)
T ss_dssp EEECCCCCCHH----HHTTCHHHHHHHHTHHHHHHHHHHHHH-------------TCEEEEEEEGGGSCCCCSSCBCTTS
T ss_pred EEECCcccChH----HHhcCHHHHHHHHHHHHHHHHHHHHHc-------------CCeEEEEchhhhcCCCCCCCCCCCC
Confidence 99999975421 122467889999999999999998643 1569999998655322
Q ss_pred --ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcc-------cCCCCHH
Q 025672 164 --WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAA-------YKFGEKW 234 (249)
Q Consensus 164 --~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~ 234 (249)
.+...|+.+|.+.+.+++.++. +.+.+.||.+..+... . ....+........+. ..+..++
T Consensus 123 ~~~p~~~Y~~sK~~~E~~~~~~~~--------~~~ilR~~~v~G~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~i~v~ 192 (287)
T 3sc6_A 123 NPAPINIYGASKYAGEQFVKELHN--------KYFIVRTSWLYGKYGN-N-FVKTMIRLGKEREEISVVADQIGSPTYVA 192 (287)
T ss_dssp CCCCCSHHHHHHHHHHHHHHHHCS--------SEEEEEECSEECSSSC-C-HHHHHHHHHTTCSEEEEECSCEECCEEHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHhCC--------CcEEEeeeeecCCCCC-c-HHHHHHHHHHcCCCeEeecCcccCceEHH
Confidence 2356899999999999876542 3578999999865321 1 122333333222222 2344599
Q ss_pred HHHHHHHHhccCC
Q 025672 235 DIAMAALYLASDA 247 (249)
Q Consensus 235 dva~~v~~l~s~~ 247 (249)
|+|+++.++++..
T Consensus 193 Dva~~~~~~~~~~ 205 (287)
T 3sc6_A 193 DLNVMINKLIHTS 205 (287)
T ss_dssp HHHHHHHHHHTSC
T ss_pred HHHHHHHHHHhCC
Confidence 9999999998764
|
| >1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=8.9e-20 Score=151.07 Aligned_cols=183 Identities=13% Similarity=0.063 Sum_probs=134.9
Q ss_pred EEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCccEE
Q 025672 14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDIL 93 (249)
Q Consensus 14 ~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~v 93 (249)
++|||||+|+||++++++|+ +|++|++++|+.. ++.+|++|.++++++++.. ++|+|
T Consensus 2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~-----------------~~~~D~~d~~~~~~~~~~~-----~~d~v 58 (299)
T 1n2s_A 2 NILLFGKTGQVGWELQRSLA-PVGNLIALDVHSK-----------------EFCGDFSNPKGVAETVRKL-----RPDVI 58 (299)
T ss_dssp EEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCS-----------------SSCCCTTCHHHHHHHHHHH-----CCSEE
T ss_pred eEEEECCCCHHHHHHHHHhh-cCCeEEEeccccc-----------------cccccCCCHHHHHHHHHhc-----CCCEE
Confidence 68999999999999999999 8999999998762 4678999999999888754 69999
Q ss_pred EEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC----------
Q 025672 94 VNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT---------- 163 (249)
Q Consensus 94 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~---------- 163 (249)
||+||..... ...++++..+++|+.++.++++++.+ . +.++|++||...+.+.
T Consensus 59 ih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~a~~~----~---------~~~~v~~SS~~vy~~~~~~~~~E~~~ 121 (299)
T 1n2s_A 59 VNAAAHTAVD----KAESEPELAQLLNATSVEAIAKAANE----T---------GAWVVHYSTDYVFPGTGDIPWQETDA 121 (299)
T ss_dssp EECCCCCCHH----HHTTCHHHHHHHHTHHHHHHHHHHTT----T---------TCEEEEEEEGGGSCCCTTCCBCTTSC
T ss_pred EECcccCCHh----hhhcCHHHHHHHHHHHHHHHHHHHHH----c---------CCcEEEEecccEEeCCCCCCCCCCCC
Confidence 9999964321 12245678899999999999988842 1 2479999998654332
Q ss_pred -ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcc-------cCCCCHHH
Q 025672 164 -WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAA-------YKFGEKWD 235 (249)
Q Consensus 164 -~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~d 235 (249)
.+...|+.+|.+.+.+++.++ . +++.+.||++.++... . ....+.+......+. ..+..++|
T Consensus 122 ~~p~~~Y~~sK~~~E~~~~~~~-----~---~~~ilRp~~v~G~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D 191 (299)
T 1n2s_A 122 TSPLNVYGKTKLAGEKALQDNC-----P---KHLIFRTSWVYAGKGN-N-FAKTMLRLAKERQTLSVINDQYGAPTGAEL 191 (299)
T ss_dssp CCCSSHHHHHHHHHHHHHHHHC-----S---SEEEEEECSEECSSSC-C-HHHHHHHHHHHCSEEEEECSCEECCEEHHH
T ss_pred CCCccHHHHHHHHHHHHHHHhC-----C---CeEEEeeeeecCCCcC-c-HHHHHHHHHhcCCCEEeecCcccCCeeHHH
Confidence 225689999999998887653 2 7889999999876432 1 122333333222222 22345899
Q ss_pred HHHHHHHhccC
Q 025672 236 IAMAALYLASD 246 (249)
Q Consensus 236 va~~v~~l~s~ 246 (249)
+|+++.++++.
T Consensus 192 va~~~~~~~~~ 202 (299)
T 1n2s_A 192 LADCTAHAIRV 202 (299)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999998864
|
| >4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.82 E-value=2.1e-19 Score=159.66 Aligned_cols=204 Identities=14% Similarity=0.026 Sum_probs=144.6
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcch---HHHHHHHHH---------hcCCCeeEEEccCCCHHHHHH
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTV---LRSAVAALH---------SLGIPAIGLEGDVRKREDAVR 78 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~---~~~~~~~~~---------~~~~~~~~~~~Dl~~~~~~~~ 78 (249)
..+++|||||+|+||++++++|.++|++|++++|+... .+.+.+.+. ....++.++.+|+++++++.
T Consensus 149 ~~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~- 227 (508)
T 4f6l_B 149 PLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV- 227 (508)
T ss_dssp CCEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC-
T ss_pred CCCeEEEECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC-
Confidence 35899999999999999999999999999999998773 233333332 22568999999999988877
Q ss_pred HHHHHHHHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccc
Q 025672 79 VVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL 158 (249)
Q Consensus 79 ~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~ 158 (249)
....+|+|||+|+... ....+...+++|+.++.++++++.+ . ..++|++||..
T Consensus 228 -------~~~~~D~Vih~Aa~~~-------~~~~~~~~~~~Nv~gt~~ll~~a~~-----~--------~~~~v~iSS~~ 280 (508)
T 4f6l_B 228 -------LPENMDTIIHAGARTD-------HFGDDDEFEKVNVQGTVDVIRLAQQ-----H--------HARLIYVSTIS 280 (508)
T ss_dssp -------CSSCCSEEEECCCC---------------CCHHHHHHHHHHHHHHHHT-----T--------TCEEEEEEESC
T ss_pred -------CccCCCEEEECCceec-------CCCCHHHHhhhHHHHHHHHHHHHHh-----C--------CCcEEEeCChh
Confidence 3468999999999653 1234577789999999999998864 1 26799999976
Q ss_pred c--cc----------------cCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCC----C---
Q 025672 159 H--YT----------------ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL----A--- 213 (249)
Q Consensus 159 ~--~~----------------~~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~----~--- 213 (249)
. .. +..+...|+.+|.+.+.+++.++ +.|++++.+.||.|..+...... .
T Consensus 281 vG~~~~~~~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-----~~gi~~~ilRp~~v~G~~~~~~~~~~~~~~~ 355 (508)
T 4f6l_B 281 VGTYFDIDTEDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAV-----NNGLDGRIVRVGNLTSPYNGRWHMRNIKTNR 355 (508)
T ss_dssp TTSEECTTCSCCEECTTCSCSSBCCCSHHHHHHHHHHHHHHHHH-----HTTCEEEEEEECCEESCSSSCCCCTTCTTCH
T ss_pred hccCCccCCcCcccccccccccccCCCcHHHHHHHHHHHHHHHH-----HcCCCEEEEecceeccCCCCCcccCCcchHH
Confidence 6 10 01145689999999999998765 24899999999999866433221 1
Q ss_pred hHHHHHhhhhh--hcc------cCCCCHHHHHHHHHHhccCC
Q 025672 214 PEEIRSKATDY--MAA------YKFGEKWDIAMAALYLASDA 247 (249)
Q Consensus 214 ~~~~~~~~~~~--~~~------~~~~~~~dva~~v~~l~s~~ 247 (249)
...+.+..... .+. ..+...+|+|+++++++...
T Consensus 356 ~~~~i~~~~~~~~~~~~~g~~~~~~v~v~DvA~ai~~~~~~~ 397 (508)
T 4f6l_B 356 FSMVMNDLLQLDCIGVSMAEMPVDFSFVDTTARQIVALAQVN 397 (508)
T ss_dssp HHHHHHHHTTCSEEETTGGGSEEECEEHHHHHHHHHHHTTBC
T ss_pred HHHHHHHHHHcCCCCCCccCceEEEEcHHHHHHHHHHHHhCC
Confidence 11222222221 111 12556899999999998654
|
| >3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} | Back alignment and structure |
|---|
Probab=99.81 E-value=3.1e-20 Score=155.08 Aligned_cols=200 Identities=10% Similarity=-0.023 Sum_probs=136.5
Q ss_pred CCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHh--cCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHS--LGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 10 l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
+.++++|||||+|+||++++++|+++|++|++++|+........+.+.. ...++.++.+|++
T Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~---------------- 68 (321)
T 3vps_A 5 TLKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKFLEKPVLELEERDLS---------------- 68 (321)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTTSSEEECSCGGGCCHHHHT----------------
T ss_pred cCCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhhhhhhccCCCeeEEeCccc----------------
Confidence 4578999999999999999999999999999999976511000000100 1234556666665
Q ss_pred CCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC----
Q 025672 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT---- 163 (249)
Q Consensus 88 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~---- 163 (249)
.+|+|||+|+....... .++....++ |+.++.++++++...- . .+||++||...+...
T Consensus 69 -~~d~vi~~a~~~~~~~~----~~~~~~~~~-n~~~~~~ll~a~~~~~----v--------~~~v~~SS~~v~~~~~~~~ 130 (321)
T 3vps_A 69 -DVRLVYHLASHKSVPRS----FKQPLDYLD-NVDSGRHLLALCTSVG----V--------PKVVVGSTCEVYGQADTLP 130 (321)
T ss_dssp -TEEEEEECCCCCCHHHH----TTSTTTTHH-HHHHHHHHHHHHHHHT----C--------CEEEEEEEGGGGCSCSSSS
T ss_pred -cCCEEEECCccCChHHH----HhCHHHHHH-HHHHHHHHHHHHHHcC----C--------CeEEEecCHHHhCCCCCCC
Confidence 69999999997542110 112233456 9999999998886542 1 579999997654322
Q ss_pred -------ccchhhHHHHHHHHHHHHHHHHHhcCCCCe-EEEEEecCccccccccCCCChHHHHHhhhhhhcc--------
Q 025672 164 -------WYQIHVSAAKAAVDSITRSLALEWGTDYAI-RVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAA-------- 227 (249)
Q Consensus 164 -------~~~~~y~~sK~a~~~l~~~la~e~~~~~gi-~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~-------- 227 (249)
.+...|+.+|.+.+.+++.++.+ .|+ +++.+.||.+.++..........+........+.
T Consensus 131 ~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~----~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (321)
T 3vps_A 131 TPEDSPLSPRSPYAASKVGLEMVAGAHQRA----SVAPEVGIVRFFNVYGPGERPDALVPRLCANLLTRNELPVEGDGEQ 206 (321)
T ss_dssp BCTTSCCCCCSHHHHHHHHHHHHHHHHHHS----SSSCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHSEEEEETTSCC
T ss_pred CCCCCCCCCCChhHHHHHHHHHHHHHHHHH----cCCCceEEEEeccccCcCCCCCChHHHHHHHHHcCCCeEEeCCCCc
Confidence 23568999999999999998865 468 9999999999976544322233343333332221
Q ss_pred -cCCCCHHHHHHHHHHhccCC
Q 025672 228 -YKFGEKWDIAMAALYLASDA 247 (249)
Q Consensus 228 -~~~~~~~dva~~v~~l~s~~ 247 (249)
..+...+|+|+++.++++..
T Consensus 207 ~~~~v~v~Dva~~~~~~~~~~ 227 (321)
T 3vps_A 207 RRDFTYITDVVDKLVALANRP 227 (321)
T ss_dssp EECEEEHHHHHHHHHHGGGSC
T ss_pred eEceEEHHHHHHHHHHHHhcC
Confidence 12457899999999999765
|
| >4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.81 E-value=1.2e-19 Score=150.92 Aligned_cols=197 Identities=13% Similarity=0.065 Sum_probs=139.0
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhC
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 88 (249)
.++++++|||||+|+||++++++|+++|+ +... ....+.++.+|++|.+++.++++..
T Consensus 3 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~------~~~~-----------~~~~~~~~~~D~~d~~~~~~~~~~~----- 60 (319)
T 4b8w_A 3 YFQSMRILVTGGSGLVGKAIQKVVADGAG------LPGE-----------DWVFVSSKDADLTDTAQTRALFEKV----- 60 (319)
T ss_dssp CCCCCEEEEETCSSHHHHHHHHHHHTTTC------CTTC-----------EEEECCTTTCCTTSHHHHHHHHHHS-----
T ss_pred cccCCeEEEECCCcHHHHHHHHHHHhcCC------cccc-----------cccccCceecccCCHHHHHHHHhhc-----
Confidence 46789999999999999999999999998 1110 0123455689999999999988753
Q ss_pred CccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc------
Q 025672 89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA------ 162 (249)
Q Consensus 89 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~------ 162 (249)
++|+|||+|+..... ..+.++....+++|+.++.++++++... +. .++|++||...+..
T Consensus 61 ~~d~Vih~A~~~~~~---~~~~~~~~~~~~~nv~gt~~ll~a~~~~----~~--------~~~v~~SS~~vyg~~~~~~~ 125 (319)
T 4b8w_A 61 QPTHVIHLAAMVGGL---FRNIKYNLDFWRKNVHMNDNVLHSAFEV----GA--------RKVVSCLSTCIFPDKTTYPI 125 (319)
T ss_dssp CCSEEEECCCCCCCH---HHHTTCHHHHHHHHHHHHHHHHHHHHHT----TC--------SEEEEECCGGGSCSSCCSSB
T ss_pred CCCEEEECceecccc---cccccCHHHHHHHHHHHHHHHHHHHHHc----CC--------CeEEEEcchhhcCCCCCCCc
Confidence 699999999974311 1122445678999999999999887532 21 57999999865421
Q ss_pred ----------CccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCC----hHHHHHh----hhhh
Q 025672 163 ----------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA----PEEIRSK----ATDY 224 (249)
Q Consensus 163 ----------~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~----~~~~~~~----~~~~ 224 (249)
.+....|+.+|.+.+.+++.++++. |++++.+.|+.+..+....... ...+... ....
T Consensus 126 ~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~----~~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (319)
T 4b8w_A 126 DETMIHNGPPHNSNFGYSYAKRMIDVQNRAYFQQY----GCTFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSG 201 (319)
T ss_dssp CGGGGGBSCCCSSSHHHHHHHHHHHHHHHHHHHHH----CCEEEEEEECEEECTTCCCCTTTSCHHHHHHHHHHHHHHHT
T ss_pred cccccccCCCCCCcchHHHHHHHHHHHHHHHHHhh----CCCEEEEeeccccCCCCCCCCccccccHHHHHHHHHHhccC
Confidence 1122369999999999999998765 5999999999998765432111 1222222 2222
Q ss_pred hcc---------cCCCCHHHHHHHHHHhccC
Q 025672 225 MAA---------YKFGEKWDIAMAALYLASD 246 (249)
Q Consensus 225 ~~~---------~~~~~~~dva~~v~~l~s~ 246 (249)
.+. ..+...+|+|+++.+++..
T Consensus 202 ~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~ 232 (319)
T 4b8w_A 202 SALTVWGTGNPRRQFIYSLDLAQLFIWVLRE 232 (319)
T ss_dssp CCEEEESCSCCEECEEEHHHHHHHHHHHHHH
T ss_pred CceEEeCCCCeeEEEEeHHHHHHHHHHHHhc
Confidence 111 1235789999999998864
|
| >2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D | Back alignment and structure |
|---|
Probab=99.80 E-value=1.1e-18 Score=143.74 Aligned_cols=184 Identities=14% Similarity=0.044 Sum_probs=132.6
Q ss_pred cEEEEecCCCchhHHHHHHHHHc--CCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCc
Q 025672 13 KVALLTGGGSGIGFEISLQLGKH--GAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (249)
Q Consensus 13 k~~lItGa~~giG~~~a~~l~~~--G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 90 (249)
|++|||||+|+||++++++|+++ |++|++++|+.++.+.+.. ..+.++.+|++|+++++++++ .+
T Consensus 1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~~------~~~~~~~~D~~d~~~l~~~~~-------~~ 67 (287)
T 2jl1_A 1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLAD------QGVEVRHGDYNQPESLQKAFA-------GV 67 (287)
T ss_dssp CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHHH------TTCEEEECCTTCHHHHHHHTT-------TC
T ss_pred CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHhh------cCCeEEEeccCCHHHHHHHHh-------cC
Confidence 46899999999999999999999 9999999998776554321 357899999999998887765 58
Q ss_pred cEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhhH
Q 025672 91 DILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVS 170 (249)
Q Consensus 91 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~ 170 (249)
|+|||+++... . + ++|+.++.++++++.. .+. ++||++||..... ....|+
T Consensus 68 d~vi~~a~~~~-------~-~------~~n~~~~~~l~~a~~~----~~~--------~~~v~~Ss~~~~~---~~~~y~ 118 (287)
T 2jl1_A 68 SKLLFISGPHY-------D-N------TLLIVQHANVVKAARD----AGV--------KHIAYTGYAFAEE---SIIPLA 118 (287)
T ss_dssp SEEEECCCCCS-------C-H------HHHHHHHHHHHHHHHH----TTC--------SEEEEEEETTGGG---CCSTHH
T ss_pred CEEEEcCCCCc-------C-c------hHHHHHHHHHHHHHHH----cCC--------CEEEEECCCCCCC---CCCchH
Confidence 99999998521 1 1 5788888888887743 221 6799999986642 234799
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhh---hhhcccCCCCHHHHHHHHHHhccCC
Q 025672 171 AAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKAT---DYMAAYKFGEKWDIAMAALYLASDA 247 (249)
Q Consensus 171 ~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~dva~~v~~l~s~~ 247 (249)
.+|.+.+.+++. .|++++.+.||++.++.... ........... .......+.+++|+|+++.+++++.
T Consensus 119 ~~K~~~E~~~~~--------~~~~~~ilrp~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~ 189 (287)
T 2jl1_A 119 HVHLATEYAIRT--------TNIPYTFLRNALYTDFFVNE-GLRASTESGAIVTNAGSGIVNSVTRNELALAAATVLTEE 189 (287)
T ss_dssp HHHHHHHHHHHH--------TTCCEEEEEECCBHHHHSSG-GGHHHHHHTEEEESCTTCCBCCBCHHHHHHHHHHHHTSS
T ss_pred HHHHHHHHHHHH--------cCCCeEEEECCEeccccchh-hHHHHhhCCceeccCCCCccCccCHHHHHHHHHHHhcCC
Confidence 999999888742 37999999999987542111 11111111100 0011235678999999999998753
|
| >3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} | Back alignment and structure |
|---|
Probab=99.79 E-value=2e-19 Score=148.22 Aligned_cols=182 Identities=14% Similarity=0.046 Sum_probs=132.3
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCc
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 90 (249)
+++++|||| +|+||++++++|+++|++|++++|+.+.+ ..++.++.+|++|.++++++++ +++
T Consensus 2 ~~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~~----------~~~~~~~~~Dl~d~~~~~~~~~------~~~ 64 (286)
T 3gpi_A 2 SLSKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQPM----------PAGVQTLIADVTRPDTLASIVH------LRP 64 (286)
T ss_dssp CCCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSCC----------CTTCCEEECCTTCGGGCTTGGG------GCC
T ss_pred CCCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcccc----------ccCCceEEccCCChHHHHHhhc------CCC
Confidence 457899999 59999999999999999999999987642 3578899999999999887765 369
Q ss_pred cEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC-------
Q 025672 91 DILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT------- 163 (249)
Q Consensus 91 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~------- 163 (249)
|+|||+|+.. ..+....+++|+.++.++++++. +.+ .++||++||...+...
T Consensus 65 d~vih~a~~~---------~~~~~~~~~~n~~~~~~ll~a~~----~~~--------~~~~v~~SS~~vyg~~~~~~~~E 123 (286)
T 3gpi_A 65 EILVYCVAAS---------EYSDEHYRLSYVEGLRNTLSALE----GAP--------LQHVFFVSSTGVYGQEVEEWLDE 123 (286)
T ss_dssp SEEEECHHHH---------HHC-----CCSHHHHHHHHHHTT----TSC--------CCEEEEEEEGGGCCCCCSSEECT
T ss_pred CEEEEeCCCC---------CCCHHHHHHHHHHHHHHHHHHHh----hCC--------CCEEEEEcccEEEcCCCCCCCCC
Confidence 9999999852 24456778999999999988875 222 2689999997654322
Q ss_pred ----ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhh------hcccCCCCH
Q 025672 164 ----WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDY------MAAYKFGEK 233 (249)
Q Consensus 164 ----~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~------~~~~~~~~~ 233 (249)
.+...|+.+|.+.+.+ +.. ++++.+.||.+..+... .+...+... .....+...
T Consensus 124 ~~~~~p~~~Y~~sK~~~E~~-~~~---------~~~~ilR~~~v~G~~~~------~~~~~~~~~~~~~~~~~~~~~i~v 187 (286)
T 3gpi_A 124 DTPPIAKDFSGKRMLEAEAL-LAA---------YSSTILRFSGIYGPGRL------RMIRQAQTPEQWPARNAWTNRIHR 187 (286)
T ss_dssp TSCCCCCSHHHHHHHHHHHH-GGG---------SSEEEEEECEEEBTTBC------HHHHHTTCGGGSCSSBCEECEEEH
T ss_pred CCCCCCCChhhHHHHHHHHH-Hhc---------CCeEEEecccccCCCch------hHHHHHHhcccCCCcCceeEEEEH
Confidence 2356899999998877 432 77899999999865432 122222221 112235678
Q ss_pred HHHHHHHHHhccC
Q 025672 234 WDIAMAALYLASD 246 (249)
Q Consensus 234 ~dva~~v~~l~s~ 246 (249)
+|+|+++.+++..
T Consensus 188 ~Dva~~~~~~~~~ 200 (286)
T 3gpi_A 188 DDGAAFIAYLIQQ 200 (286)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhh
Confidence 9999999999865
|
| >2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=8.2e-18 Score=138.27 Aligned_cols=179 Identities=12% Similarity=0.049 Sum_probs=124.5
Q ss_pred EEEEecCCCchhHHHHHHHHHc--CCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCcc
Q 025672 14 VALLTGGGSGIGFEISLQLGKH--GAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD 91 (249)
Q Consensus 14 ~~lItGa~~giG~~~a~~l~~~--G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 91 (249)
++|||||+|+||++++++|+++ |++|++++|+.++.+.+.. ..+.++.+|++|+++++++++ .+|
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~------~~~~~~~~D~~d~~~~~~~~~-------~~d 67 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAA------QGITVRQADYGDEAALTSALQ-------GVE 67 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHHH------TTCEEEECCTTCHHHHHHHTT-------TCS
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhhc------CCCeEEEcCCCCHHHHHHHHh-------CCC
Confidence 4799999999999999999998 9999999998776554321 357899999999998887764 589
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhhHH
Q 025672 92 ILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSA 171 (249)
Q Consensus 92 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~~ 171 (249)
+|||+++... ..|+.++.++++++.. .+. ++||++||.... . ....|+.
T Consensus 68 ~vi~~a~~~~----------------~~~~~~~~~l~~a~~~----~~~--------~~~v~~Ss~~~~-~--~~~~y~~ 116 (286)
T 2zcu_A 68 KLLLISSSEV----------------GQRAPQHRNVINAAKA----AGV--------KFIAYTSLLHAD-T--SPLGLAD 116 (286)
T ss_dssp EEEECC------------------------CHHHHHHHHHHH----HTC--------CEEEEEEETTTT-T--CCSTTHH
T ss_pred EEEEeCCCCc----------------hHHHHHHHHHHHHHHH----cCC--------CEEEEECCCCCC-C--CcchhHH
Confidence 9999998421 1356666666666543 222 679999998765 2 2347999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHH-hhhh---hhcccCCCCHHHHHHHHHHhccCC
Q 025672 172 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRS-KATD---YMAAYKFGEKWDIAMAALYLASDA 247 (249)
Q Consensus 172 sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~dva~~v~~l~s~~ 247 (249)
+|.+.+.+++. .|++++.+.||++.++. .... ....+ .... ......+.+++|+|+++.+++++.
T Consensus 117 sK~~~e~~~~~--------~~~~~~ilrp~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~ 185 (286)
T 2zcu_A 117 EHIETEKMLAD--------SGIVYTLLRNGWYSENY-LASA--PAALEHGVFIGAAGDGKIASATRADYAAAAARVISEA 185 (286)
T ss_dssp HHHHHHHHHHH--------HCSEEEEEEECCBHHHH-HTTH--HHHHHHTEEEESCTTCCBCCBCHHHHHHHHHHHHHSS
T ss_pred HHHHHHHHHHH--------cCCCeEEEeChHHhhhh-HHHh--HHhhcCCceeccCCCCccccccHHHHHHHHHHHhcCC
Confidence 99999988753 26999999999987432 1111 11111 1000 011234678999999999998753
|
| >2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A | Back alignment and structure |
|---|
Probab=99.74 E-value=1.6e-17 Score=137.59 Aligned_cols=191 Identities=12% Similarity=0.012 Sum_probs=126.7
Q ss_pred CcEEEEecCCCchhHHHHHHHHHcC-CeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCc
Q 025672 12 GKVALLTGGGSGIGFEISLQLGKHG-AAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (249)
Q Consensus 12 ~k~~lItGa~~giG~~~a~~l~~~G-~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 90 (249)
.|+++||||+|+||++++++|+++| ++|++++|+.+.... +.+.. ..+.++++|++|+++++++++ .+
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~--~~l~~--~~~~~~~~D~~d~~~l~~~~~-------~~ 73 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAA--KELRL--QGAEVVQGDQDDQVIMELALN-------GA 73 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHH--HHHHH--TTCEEEECCTTCHHHHHHHHT-------TC
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHH--HHHHH--CCCEEEEecCCCHHHHHHHHh-------cC
Confidence 5899999999999999999999999 999999998765431 22322 357889999999999888765 58
Q ss_pred cEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc--cCccchh
Q 025672 91 DILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT--ATWYQIH 168 (249)
Q Consensus 91 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~--~~~~~~~ 168 (249)
|+|||+++..... ..+.|+.+..+++++ +.+.+. ++||++|+..... .......
T Consensus 74 d~vi~~a~~~~~~------------~~~~~~~~~~~~~~a----a~~~gv--------~~iv~~S~~~~~~~~~~~~~~~ 129 (299)
T 2wm3_A 74 YATFIVTNYWESC------------SQEQEVKQGKLLADL----ARRLGL--------HYVVYSGLENIKKLTAGRLAAA 129 (299)
T ss_dssp SEEEECCCHHHHT------------CHHHHHHHHHHHHHH----HHHHTC--------SEEEECCCCCHHHHTTTSCCCH
T ss_pred CEEEEeCCCCccc------------cchHHHHHHHHHHHH----HHHcCC--------CEEEEEcCccccccCCCcccCc
Confidence 9999999842110 123455554444444 444332 6799966643221 1122457
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHh--hhhhhcc----cCCCCHHHHHHHHHH
Q 025672 169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSK--ATDYMAA----YKFGEKWDIAMAALY 242 (249)
Q Consensus 169 y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~--~~~~~~~----~~~~~~~dva~~v~~ 242 (249)
|..+|.+++.+++. .|++++.|.||++.++.. ....+...... ..-..|. ..+.+++|+|+++..
T Consensus 130 y~~sK~~~e~~~~~--------~gi~~~ilrp~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~Dva~~~~~ 200 (299)
T 2wm3_A 130 HFDGKGEVEEYFRD--------IGVPMTSVRLPCYFENLL-SHFLPQKAPDGKSYLLSLPTGDVPMDGMSVSDLGPVVLS 200 (299)
T ss_dssp HHHHHHHHHHHHHH--------HTCCEEEEECCEEGGGGG-TTTCCEECTTSSSEEECCCCTTSCEEEECGGGHHHHHHH
T ss_pred hhhHHHHHHHHHHH--------CCCCEEEEeecHHhhhch-hhcCCcccCCCCEEEEEecCCCCccceecHHHHHHHHHH
Confidence 99999999988753 269999999999986532 21111000000 0000111 235689999999999
Q ss_pred hccC
Q 025672 243 LASD 246 (249)
Q Consensus 243 l~s~ 246 (249)
++.+
T Consensus 201 ~l~~ 204 (299)
T 2wm3_A 201 LLKM 204 (299)
T ss_dssp HHHS
T ss_pred HHcC
Confidence 8864
|
| >3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=3.3e-17 Score=138.60 Aligned_cols=191 Identities=15% Similarity=0.050 Sum_probs=127.5
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcc----hHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHH
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT----VLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTI 84 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~----~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 84 (249)
.++.+++|||||+|+||++++++|+++|++|++++|+.. +.+ ..+.+. ..++.++.+|++|.+++.+++++.
T Consensus 7 ~M~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~-~~~~l~--~~~v~~~~~Dl~d~~~l~~~~~~~- 82 (346)
T 3i6i_A 7 PSPKGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAK-IFKALE--DKGAIIVYGLINEQEAMEKILKEH- 82 (346)
T ss_dssp ----CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHH-HHHHHH--HTTCEEEECCTTCHHHHHHHHHHT-
T ss_pred CCCCCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHH-HHHHHH--hCCcEEEEeecCCHHHHHHHHhhC-
Confidence 345789999999999999999999999999999999872 222 122232 246889999999999999988753
Q ss_pred HHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccc----
Q 025672 85 NHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY---- 160 (249)
Q Consensus 85 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~---- 160 (249)
.+|+|||+++. .|+.+..++++++...- .. .++|+ |+....
T Consensus 83 ----~~d~Vi~~a~~-------------------~n~~~~~~l~~aa~~~g---~v--------~~~v~-S~~g~~~~e~ 127 (346)
T 3i6i_A 83 ----EIDIVVSTVGG-------------------ESILDQIALVKAMKAVG---TI--------KRFLP-SEFGHDVNRA 127 (346)
T ss_dssp ----TCCEEEECCCG-------------------GGGGGHHHHHHHHHHHC---CC--------SEEEC-SCCSSCTTTC
T ss_pred ----CCCEEEECCch-------------------hhHHHHHHHHHHHHHcC---Cc--------eEEee-cccCCCCCcc
Confidence 69999999985 27888888888776431 01 34554 443221
Q ss_pred ccCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHH-------hhhhhhcccCCCCH
Q 025672 161 TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRS-------KATDYMAAYKFGEK 233 (249)
Q Consensus 161 ~~~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~ 233 (249)
.+..+...|+.+|.+++.+.+. .|++++.|.||++... ............ ..........+.+.
T Consensus 128 ~~~~p~~~y~~sK~~~e~~l~~--------~g~~~tivrpg~~~g~-~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~~ 198 (346)
T 3i6i_A 128 DPVEPGLNMYREKRRVRQLVEE--------SGIPFTYICCNSIASW-PYYNNIHPSEVLPPTDFFQIYGDGNVKAYFVAG 198 (346)
T ss_dssp CCCTTHHHHHHHHHHHHHHHHH--------TTCCBEEEECCEESSC-CCSCC-----CCCCSSCEEEETTSCCCEEEECH
T ss_pred CcCCCcchHHHHHHHHHHHHHH--------cCCCEEEEEecccccc-cCccccccccccCCCceEEEccCCCceEEecCH
Confidence 1224567899999998777653 3699999999999742 222211111000 00011112236689
Q ss_pred HHHHHHHHHhccCC
Q 025672 234 WDIAMAALYLASDA 247 (249)
Q Consensus 234 ~dva~~v~~l~s~~ 247 (249)
+|+|+++..++.+.
T Consensus 199 ~Dva~~~~~~l~~~ 212 (346)
T 3i6i_A 199 TDIGKFTMKTVDDV 212 (346)
T ss_dssp HHHHHHHHHHTTCG
T ss_pred HHHHHHHHHHHhCc
Confidence 99999999998753
|
| >2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} | Back alignment and structure |
|---|
Probab=99.73 E-value=5.8e-17 Score=134.55 Aligned_cols=184 Identities=16% Similarity=0.136 Sum_probs=120.2
Q ss_pred CcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCc-------chHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHH
Q 025672 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK-------TVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTI 84 (249)
Q Consensus 12 ~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~-------~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 84 (249)
+++++||||+|+||++++++|+++|++|++++|+. ++.+.+ +++.. ..+.++++|++|++++.++++
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~-~~l~~--~~v~~v~~D~~d~~~l~~~~~--- 75 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELI-DNYQS--LGVILLEGDINDHETLVKAIK--- 75 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHH-HHHHH--TTCEEEECCTTCHHHHHHHHT---
T ss_pred CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHH-HHHHh--CCCEEEEeCCCCHHHHHHHHh---
Confidence 46799999999999999999999999999999986 333332 23332 357899999999999887775
Q ss_pred HHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CCCCCCCCCceEEEeccccccc--
Q 025672 85 NHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGG-RGQASSSSGGIIINISATLHYT-- 161 (249)
Q Consensus 85 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~~~~~~g~iv~iss~~~~~-- 161 (249)
.+|+|||+++... +.+..++++++. +.+ . .++| .|..+..
T Consensus 76 ----~~d~vi~~a~~~~-------------------~~~~~~l~~aa~----~~g~v--------~~~v--~S~~g~~~~ 118 (307)
T 2gas_A 76 ----QVDIVICAAGRLL-------------------IEDQVKIIKAIK----EAGNV--------KKFF--PSEFGLDVD 118 (307)
T ss_dssp ----TCSEEEECSSSSC-------------------GGGHHHHHHHHH----HHCCC--------SEEE--CSCCSSCTT
T ss_pred ----CCCEEEECCcccc-------------------cccHHHHHHHHH----hcCCc--------eEEe--ecccccCcc
Confidence 5899999998532 234445555443 332 2 4566 2433321
Q ss_pred ----cCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCC------hHHHHHhhhhhhcccCCC
Q 025672 162 ----ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA------PEEIRSKATDYMAAYKFG 231 (249)
Q Consensus 162 ----~~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~------~~~~~~~~~~~~~~~~~~ 231 (249)
..+....| .+|.+++.+.+. .|++++.|.||++.+........ ................+.
T Consensus 119 ~~~~~~p~~~~y-~sK~~~e~~~~~--------~~i~~~~lrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 189 (307)
T 2gas_A 119 RHDAVEPVRQVF-EEKASIRRVIEA--------EGVPYTYLCCHAFTGYFLRNLAQLDATDPPRDKVVILGDGNVKGAYV 189 (307)
T ss_dssp SCCCCTTHHHHH-HHHHHHHHHHHH--------HTCCBEEEECCEETTTTGGGTTCTTCSSCCSSEEEEETTSCSEEEEE
T ss_pred cccCCCcchhHH-HHHHHHHHHHHH--------cCCCeEEEEcceeeccccccccccccccCCCCeEEEecCCCcceEEe
Confidence 12335678 999998877642 25889999999997532211100 000000000111123456
Q ss_pred CHHHHHHHHHHhccCC
Q 025672 232 EKWDIAMAALYLASDA 247 (249)
Q Consensus 232 ~~~dva~~v~~l~s~~ 247 (249)
+++|+|+++..++++.
T Consensus 190 ~~~Dva~~~~~~l~~~ 205 (307)
T 2gas_A 190 TEADVGTFTIRAANDP 205 (307)
T ss_dssp CHHHHHHHHHHHHTCG
T ss_pred eHHHHHHHHHHHHcCc
Confidence 8999999999998753
|
| >1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=2.5e-17 Score=139.76 Aligned_cols=189 Identities=14% Similarity=0.087 Sum_probs=127.8
Q ss_pred CCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEcc-CCCHHHHHHHHHHHHHHhC
Q 025672 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD-VRKREDAVRVVESTINHFG 88 (249)
Q Consensus 10 l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~D-l~~~~~~~~~~~~~~~~~~ 88 (249)
+++++++||||+|+||++++++|+++|++|++++|+.+... .+.+.. ..++.++.+| ++|++++.++++
T Consensus 3 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~--~~~l~~-~~~v~~v~~D~l~d~~~l~~~~~------- 72 (352)
T 1xgk_A 3 QQKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLI--AEELQA-IPNVTLFQGPLLNNVPLMDTLFE------- 72 (352)
T ss_dssp CCCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHH--HHHHHT-STTEEEEESCCTTCHHHHHHHHT-------
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhh--HHHHhh-cCCcEEEECCccCCHHHHHHHHh-------
Confidence 34688999999999999999999999999999999877642 122322 2368899999 999999888765
Q ss_pred CccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CCCCCCCCCceEEEecccc-ccccCccc
Q 025672 89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGG-RGQASSSSGGIIINISATL-HYTATWYQ 166 (249)
Q Consensus 89 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~~~~~~g~iv~iss~~-~~~~~~~~ 166 (249)
.+|+||||++... .+.|..+ .++++++ .+.+ . ++||++||.. ...+....
T Consensus 73 ~~d~Vi~~a~~~~---------------~~~~~~~-~~l~~aa----~~~g~v--------~~~V~~SS~~~~~~~~~~~ 124 (352)
T 1xgk_A 73 GAHLAFINTTSQA---------------GDEIAIG-KDLADAA----KRAGTI--------QHYIYSSMPDHSLYGPWPA 124 (352)
T ss_dssp TCSEEEECCCSTT---------------SCHHHHH-HHHHHHH----HHHSCC--------SEEEEEECCCGGGTSSCCC
T ss_pred cCCEEEEcCCCCC---------------cHHHHHH-HHHHHHH----HHcCCc--------cEEEEeCCccccccCCCCC
Confidence 5899999987431 0234444 4454444 3332 2 6799999986 34444455
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHh--hhhhh----c-----ccCCCCH-H
Q 025672 167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSK--ATDYM----A-----AYKFGEK-W 234 (249)
Q Consensus 167 ~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~--~~~~~----~-----~~~~~~~-~ 234 (249)
..|+.+|.+.+.+++. .|++++.|.||++. +.......+ -+... ..... + ...+.++ +
T Consensus 125 ~~y~~sK~~~E~~~~~--------~gi~~~ivrpg~~g-~~~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~i~v~~ 194 (352)
T 1xgk_A 125 VPMWAPKFTVENYVRQ--------LGLPSTFVYAGIYN-NNFTSLPYP-LFQMELMPDGTFEWHAPFDPDIPLPWLDAEH 194 (352)
T ss_dssp CTTTHHHHHHHHHHHT--------SSSCEEEEEECEEG-GGCBSSSCS-SCBEEECTTSCEEEEESSCTTSCEEEECHHH
T ss_pred ccHHHHHHHHHHHHHH--------cCCCEEEEecceec-CCchhcccc-cccccccCCCceEEeeccCCCCceeeEecHH
Confidence 6799999999988754 26999999999875 433221100 00000 00000 1 1124567 8
Q ss_pred HHHHHHHHhccC
Q 025672 235 DIAMAALYLASD 246 (249)
Q Consensus 235 dva~~v~~l~s~ 246 (249)
|+|+++..++.+
T Consensus 195 Dva~ai~~~l~~ 206 (352)
T 1xgk_A 195 DVGPALLQIFKD 206 (352)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHhC
Confidence 999999998864
|
| >3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.73 E-value=4.8e-17 Score=134.03 Aligned_cols=182 Identities=14% Similarity=-0.024 Sum_probs=119.5
Q ss_pred EEEEecCCCchhHHHHHHHHHc-CCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCccE
Q 025672 14 VALLTGGGSGIGFEISLQLGKH-GAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI 92 (249)
Q Consensus 14 ~~lItGa~~giG~~~a~~l~~~-G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ 92 (249)
++|||||+|+||++++++|.+. |++|++++|+.++.+.+ ...++.++.+|++|++++.++++ .+|+
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~------~~~~v~~~~~D~~d~~~l~~~~~-------~~d~ 68 (289)
T 3e48_A 2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDD------WRGKVSVRQLDYFNQESMVEAFK-------GMDT 68 (289)
T ss_dssp CEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGG------GBTTBEEEECCTTCHHHHHHHTT-------TCSE
T ss_pred EEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHh------hhCCCEEEEcCCCCHHHHHHHHh-------CCCE
Confidence 5899999999999999999998 99999999998754332 13468999999999999888764 6899
Q ss_pred EEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhhHHH
Q 025672 93 LVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAA 172 (249)
Q Consensus 93 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~~s 172 (249)
|||++|.... . ..|+.+..++++ .+.+.+. ++||++||.......+ |..+
T Consensus 69 vi~~a~~~~~-------~-------~~~~~~~~~l~~----aa~~~gv--------~~iv~~Ss~~~~~~~~----~~~~ 118 (289)
T 3e48_A 69 VVFIPSIIHP-------S-------FKRIPEVENLVY----AAKQSGV--------AHIIFIGYYADQHNNP----FHMS 118 (289)
T ss_dssp EEECCCCCCS-------H-------HHHHHHHHHHHH----HHHHTTC--------CEEEEEEESCCSTTCC----STTH
T ss_pred EEEeCCCCcc-------c-------hhhHHHHHHHHH----HHHHcCC--------CEEEEEcccCCCCCCC----Cccc
Confidence 9999985321 1 125555544444 4444432 6799999965433222 2222
Q ss_pred HHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccC----CCCHHHHHHHHHHhccCC
Q 025672 173 KAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK----FGEKWDIAMAALYLASDA 247 (249)
Q Consensus 173 K~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~dva~~v~~l~s~~ 247 (249)
+.. . .+...+. ..|++++.+.||++.++.. .. ............+.+. +.+++|+|+++.+++++.
T Consensus 119 ~~~--~---~~e~~~~-~~g~~~~ilrp~~~~~~~~-~~--~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~ 188 (289)
T 3e48_A 119 PYF--G---YASRLLS-TSGIDYTYVRMAMYMDPLK-PY--LPELMNMHKLIYPAGDGRINYITRNDIARGVIAIIKNP 188 (289)
T ss_dssp HHH--H---HHHHHHH-HHCCEEEEEEECEESTTHH-HH--HHHHHHHTEECCCCTTCEEEEECHHHHHHHHHHHHHCG
T ss_pred hhH--H---HHHHHHH-HcCCCEEEEeccccccccH-HH--HHHHHHCCCEecCCCCceeeeEEHHHHHHHHHHHHcCC
Confidence 211 1 2223333 4579999999999985421 11 0111111111122222 568999999999998754
|
| >3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A | Back alignment and structure |
|---|
Probab=99.71 E-value=4.1e-17 Score=139.16 Aligned_cols=175 Identities=13% Similarity=-0.012 Sum_probs=129.6
Q ss_pred EEEEecCCCchhHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCccE
Q 025672 14 VALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI 92 (249)
Q Consensus 14 ~~lItGa~~giG~~~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ 92 (249)
++|||||+|+||++++++|+++|+ +|+.++|+ +|+++++++++ .+|+
T Consensus 2 ~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~-------------------------~d~~~l~~~~~-------~~d~ 49 (369)
T 3st7_A 2 NIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ-------------------------TKEEELESALL-------KADF 49 (369)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT-------------------------CCHHHHHHHHH-------HCSE
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC-------------------------CCHHHHHHHhc-------cCCE
Confidence 699999999999999999999998 77776664 67888888876 3899
Q ss_pred EEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhhHHH
Q 025672 93 LVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAA 172 (249)
Q Consensus 93 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~~s 172 (249)
|||+||.... ++....+++|+.++.++++++. +.+. ..++|++||..... ...|+.+
T Consensus 50 Vih~a~~~~~--------~~~~~~~~~n~~~~~~l~~a~~----~~~~-------~~~~v~~Ss~~~~~----~~~Y~~s 106 (369)
T 3st7_A 50 IVHLAGVNRP--------EHDKEFSLGNVSYLDHVLDILT----RNTK-------KPAILLSSSIQATQ----DNPYGES 106 (369)
T ss_dssp EEECCCSBCT--------TCSTTCSSSCCBHHHHHHHHHT----TCSS-------CCEEEEEEEGGGGS----CSHHHHH
T ss_pred EEECCcCCCC--------CCHHHHHHHHHHHHHHHHHHHH----HhCC-------CCeEEEeCchhhcC----CCCchHH
Confidence 9999996542 2335567899999999988874 2211 13799999987654 5679999
Q ss_pred HHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCC--ChHHHHHhhhhhhcc--------cCCCCHHHHHHHHHH
Q 025672 173 KAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL--APEEIRSKATDYMAA--------YKFGEKWDIAMAALY 242 (249)
Q Consensus 173 K~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~--~~~~~~~~~~~~~~~--------~~~~~~~dva~~v~~ 242 (249)
|.+.+.+++.++++. |+++..+.|+.+..+...... ....+........+. ..+..++|+|+++..
T Consensus 107 K~~~E~~~~~~~~~~----g~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~ 182 (369)
T 3st7_A 107 KLQGEQLLREYAEEY----GNTVYIYRWPNLFGKWCKPNYNSVIATFCYKIARNEEIQVNDRNVELTLNYVDDIVAEIKR 182 (369)
T ss_dssp HHHHHHHHHHHHHHH----CCCEEEEEECEEECTTCCTTSSCHHHHHHHHHHTTCCCCCSCTTCEEEEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh----CCCEEEEECCceeCCCCCCCcchHHHHHHHHHHcCCCeEecCCCeEEEEEEHHHHHHHHHH
Confidence 999999999998875 589999999999866443321 122333333322221 124568999999999
Q ss_pred hccCC
Q 025672 243 LASDA 247 (249)
Q Consensus 243 l~s~~ 247 (249)
++...
T Consensus 183 ~l~~~ 187 (369)
T 3st7_A 183 AIEGT 187 (369)
T ss_dssp HHHTC
T ss_pred HHhCC
Confidence 98654
|
| >2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* | Back alignment and structure |
|---|
Probab=99.69 E-value=5.4e-16 Score=131.66 Aligned_cols=197 Identities=14% Similarity=0.026 Sum_probs=130.6
Q ss_pred CcEEEEecCCCchhHHHHHHHHHcC-----CeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHH
Q 025672 12 GKVALLTGGGSGIGFEISLQLGKHG-----AAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (249)
Q Consensus 12 ~k~~lItGa~~giG~~~a~~l~~~G-----~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 86 (249)
+|++|||||+|+||++++++|+++| ++|++++|+..... ....++.++.+|++|.+++.++++..
T Consensus 1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~-------~~~~~~~~~~~Dl~d~~~~~~~~~~~--- 70 (364)
T 2v6g_A 1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW-------HEDNPINYVQCDISDPDDSQAKLSPL--- 70 (364)
T ss_dssp CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC-------CCSSCCEEEECCTTSHHHHHHHHTTC---
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc-------cccCceEEEEeecCCHHHHHHHHhcC---
Confidence 4789999999999999999999999 99999999876432 12346889999999999888776532
Q ss_pred hCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEE-------Eeccccc
Q 025672 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIII-------NISATLH 159 (249)
Q Consensus 87 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv-------~iss~~~ 159 (249)
+++|+|||+||... ++....+++|+.++.++++++.+... + -.++| ++||...
T Consensus 71 -~~~d~vih~a~~~~---------~~~~~~~~~n~~~~~~l~~a~~~~~~--~--------~~~~v~~~g~~i~~Ss~~v 130 (364)
T 2v6g_A 71 -TDVTHVFYVTWANR---------STEQENCEANSKMFRNVLDAVIPNCP--N--------LKHISLQTGRKHYMGPFES 130 (364)
T ss_dssp -TTCCEEEECCCCCC---------SSHHHHHHHHHHHHHHHHHHHTTTCT--T--------CCEEEEECCTHHHHCCGGG
T ss_pred -CCCCEEEECCCCCc---------chHHHHHHHhHHHHHHHHHHHHHhcc--c--------cceEEeccCceEEEechhh
Confidence 24999999999642 24577889999999999998864311 1 14465 6787643
Q ss_pred cccC--------------ccchhhHHHHHHHHHHHHHHHHHhcCCCC-eEEEEEecCccccccccCCCC--hHH-HHHhh
Q 025672 160 YTAT--------------WYQIHVSAAKAAVDSITRSLALEWGTDYA-IRVNGIAPGPIKDTAGVSKLA--PEE-IRSKA 221 (249)
Q Consensus 160 ~~~~--------------~~~~~y~~sK~a~~~l~~~la~e~~~~~g-i~v~~v~pG~v~t~~~~~~~~--~~~-~~~~~ 221 (249)
+... +....|. +.+.+++.++ ..+| ++++.+.|+.+..+....... ... +...+
T Consensus 131 yg~~~~~~~~~~E~~~~~~~~~~y~----~~E~~~~~~~----~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~ 202 (364)
T 2v6g_A 131 YGKIESHDPPYTEDLPRLKYMNFYY----DLEDIMLEEV----EKKEGLTWSVHRPGNIFGFSPYSMMNLVGTLCVYAAI 202 (364)
T ss_dssp TTTSCCCCSSBCTTSCCCSSCCHHH----HHHHHHHHHH----TTSTTCEEEEEEESSEECCCTTCSSCHHHHHHHHHHH
T ss_pred ccccccCCCCCCccccCCccchhhH----HHHHHHHHHh----hcCCCceEEEECCCceeCCCCCcccchHHHHHHHHHH
Confidence 3211 1123452 2344444333 2455 999999999999764432211 111 22222
Q ss_pred --hhhhcc------------cCCCCHHHHHHHHHHhccC
Q 025672 222 --TDYMAA------------YKFGEKWDIAMAALYLASD 246 (249)
Q Consensus 222 --~~~~~~------------~~~~~~~dva~~v~~l~s~ 246 (249)
....+. ....+.+|+|++++.++..
T Consensus 203 ~~~~g~~~~~~g~~~~~~~~~~~~~v~Dva~a~~~~~~~ 241 (364)
T 2v6g_A 203 CKHEGKVLRFTGCKAAWDGYSDCSDADLIAEHHIWAAVD 241 (364)
T ss_dssp HHHHTCCBCCCSCHHHHHSCBCCEEHHHHHHHHHHHHHC
T ss_pred HHhcCCceecCCCcccccccCCCCcHHHHHHHHHHHHhC
Confidence 111111 1223448899999988854
|
| >3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=99.69 E-value=5.2e-16 Score=138.05 Aligned_cols=191 Identities=15% Similarity=0.051 Sum_probs=129.6
Q ss_pred CcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCcc
Q 025672 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD 91 (249)
Q Consensus 12 ~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 91 (249)
++++|||||+|+||++++++|+++|++|++++|+.... ..+.+|+.+.. .+.+..+|
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~--------------~~v~~d~~~~~---------~~~l~~~D 203 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKP--------------GKRFWDPLNPA---------SDLLDGAD 203 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCT--------------TCEECCTTSCC---------TTTTTTCS
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCc--------------cceeecccchh---------HHhcCCCC
Confidence 57999999999999999999999999999999987642 12667876431 22345799
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc-cC-------
Q 025672 92 ILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT-AT------- 163 (249)
Q Consensus 92 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~-~~------- 163 (249)
+|||+||..... ..+.+.....+++|+.++.++++++.. +.+ ..+||++||...+. ..
T Consensus 204 ~Vih~A~~~~~~---~~~~~~~~~~~~~Nv~gt~~ll~a~a~---~~~--------~~r~V~~SS~~vyg~~~~~~~~~E 269 (516)
T 3oh8_A 204 VLVHLAGEPIFG---RFNDSHKEAIRESRVLPTKFLAELVAE---STQ--------CTTMISASAVGFYGHDRGDEILTE 269 (516)
T ss_dssp EEEECCCC--------CCGGGHHHHHHHTHHHHHHHHHHHHH---CSS--------CCEEEEEEEGGGGCSEEEEEEECT
T ss_pred EEEECCCCcccc---ccchhHHHHHHHHHHHHHHHHHHHHHh---cCC--------CCEEEEeCcceEecCCCCCCccCC
Confidence 999999975432 345567788999999999999997542 222 26799999976543 10
Q ss_pred ---ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhh--------hcccCCCC
Q 025672 164 ---WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDY--------MAAYKFGE 232 (249)
Q Consensus 164 ---~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~--------~~~~~~~~ 232 (249)
.+...|+.+|...+.+.+. +. ..|++++.+.||.+.++.. . ....+...+... .....+..
T Consensus 270 ~~~~~~~~y~~~~~~~E~~~~~----~~-~~gi~~~ilRp~~v~Gp~~--~-~~~~~~~~~~~g~~~~~g~g~~~~~~i~ 341 (516)
T 3oh8_A 270 ESESGDDFLAEVCRDWEHATAP----AS-DAGKRVAFIRTGVALSGRG--G-MLPLLKTLFSTGLGGKFGDGTSWFSWIA 341 (516)
T ss_dssp TSCCCSSHHHHHHHHHHHTTHH----HH-HTTCEEEEEEECEEEBTTB--S-HHHHHHHTTC---CCCCTTSCCEECEEE
T ss_pred CCCCCcChHHHHHHHHHHHHHH----HH-hCCCCEEEEEeeEEECCCC--C-hHHHHHHHHHhCCCcccCCCCceEceEe
Confidence 1344678788776665432 22 5589999999999997542 1 111222211111 01123457
Q ss_pred HHHHHHHHHHhccCC
Q 025672 233 KWDIAMAALYLASDA 247 (249)
Q Consensus 233 ~~dva~~v~~l~s~~ 247 (249)
.+|+|+++.+++...
T Consensus 342 v~Dva~ai~~~l~~~ 356 (516)
T 3oh8_A 342 IDDLTDIYYRAIVDA 356 (516)
T ss_dssp HHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHhCc
Confidence 899999999998643
|
| >3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} | Back alignment and structure |
|---|
Probab=99.69 E-value=4.9e-16 Score=127.73 Aligned_cols=177 Identities=11% Similarity=-0.046 Sum_probs=121.1
Q ss_pred cEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCccE
Q 025672 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI 92 (249)
Q Consensus 13 k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ 92 (249)
+++||||+ |+||++++++|+++|++|++++|+..+.+.+.. ..+.++.+|++|.+ +..+|+
T Consensus 6 ~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~------~~~~~~~~D~~d~~------------~~~~d~ 66 (286)
T 3ius_A 6 GTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRA------SGAEPLLWPGEEPS------------LDGVTH 66 (286)
T ss_dssp CEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHH------TTEEEEESSSSCCC------------CTTCCE
T ss_pred CcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhh------CCCeEEEecccccc------------cCCCCE
Confidence 68999998 999999999999999999999999877654432 36889999999933 457999
Q ss_pred EEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHh--cCCCCCCCCCCceEEEeccccccccC-------
Q 025672 93 LVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKK--GGRGQASSSSGGIIINISATLHYTAT------- 163 (249)
Q Consensus 93 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~~~~~~~~~g~iv~iss~~~~~~~------- 163 (249)
|||+|+..... .+ . .+.++..+.+ .+ ..++|++||...+...
T Consensus 67 vi~~a~~~~~~-----~~--~--------------~~~l~~a~~~~~~~--------~~~~v~~Ss~~vyg~~~~~~~~E 117 (286)
T 3ius_A 67 LLISTAPDSGG-----DP--V--------------LAALGDQIAARAAQ--------FRWVGYLSTTAVYGDHDGAWVDE 117 (286)
T ss_dssp EEECCCCBTTB-----CH--H--------------HHHHHHHHHHTGGG--------CSEEEEEEEGGGGCCCTTCEECT
T ss_pred EEECCCccccc-----cH--H--------------HHHHHHHHHhhcCC--------ceEEEEeecceecCCCCCCCcCC
Confidence 99999954321 11 0 1233333433 22 2679999997544221
Q ss_pred ----ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHh----hhhhhcccCCCCHHH
Q 025672 164 ----WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSK----ATDYMAAYKFGEKWD 235 (249)
Q Consensus 164 ----~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~d 235 (249)
.+...|+.+|.+.+.+++.+ .|++++.+.||.+..+.... .. .+... +...-....+...+|
T Consensus 118 ~~~~~p~~~Y~~sK~~~E~~~~~~-------~~~~~~ilRp~~v~G~~~~~-~~--~~~~~~~~~~~~~~~~~~~i~v~D 187 (286)
T 3ius_A 118 TTPLTPTAARGRWRVMAEQQWQAV-------PNLPLHVFRLAGIYGPGRGP-FS--KLGKGGIRRIIKPGQVFSRIHVED 187 (286)
T ss_dssp TSCCCCCSHHHHHHHHHHHHHHHS-------TTCCEEEEEECEEEBTTBSS-ST--TSSSSCCCEEECTTCCBCEEEHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHHhh-------cCCCEEEEeccceECCCchH-HH--HHhcCCccccCCCCcccceEEHHH
Confidence 23457999999999888766 36999999999998654221 10 00000 000011223556799
Q ss_pred HHHHHHHhccCC
Q 025672 236 IAMAALYLASDA 247 (249)
Q Consensus 236 va~~v~~l~s~~ 247 (249)
+|+++.++++..
T Consensus 188 va~a~~~~~~~~ 199 (286)
T 3ius_A 188 IAQVLAASMARP 199 (286)
T ss_dssp HHHHHHHHHHSC
T ss_pred HHHHHHHHHhCC
Confidence 999999998654
|
| >1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.67 E-value=3.5e-16 Score=130.15 Aligned_cols=188 Identities=15% Similarity=0.083 Sum_probs=122.2
Q ss_pred CcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcc-----hHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHH
Q 025672 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT-----VLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (249)
Q Consensus 12 ~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~-----~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 86 (249)
.++++||||+|+||++++++|+++|++|++++|+.. +.+.+ +++. ...+.++++|++|++++.++++
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~-~~~~--~~~~~~~~~D~~d~~~l~~~~~----- 75 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQML-LYFK--QLGAKLIEASLDDHQRLVDALK----- 75 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHH-HHHH--TTTCEEECCCSSCHHHHHHHHT-----
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHH-HHHH--hCCeEEEeCCCCCHHHHHHHHh-----
Confidence 467999999999999999999999999999999853 22222 2232 3468899999999999888765
Q ss_pred hCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CCCCCCCCCceEEEeccccccc----
Q 025672 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGG-RGQASSSSGGIIINISATLHYT---- 161 (249)
Q Consensus 87 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~~~~~~g~iv~iss~~~~~---- 161 (249)
.+|+|||+++..... .|+.+..++++++. +.+ . .+||+ |+.....
T Consensus 76 --~~d~vi~~a~~~~~~---------------~~~~~~~~l~~aa~----~~g~v--------~~~v~-S~~g~~~~~~~ 125 (313)
T 1qyd_A 76 --QVDVVISALAGGVLS---------------HHILEQLKLVEAIK----EAGNI--------KRFLP-SEFGMDPDIME 125 (313)
T ss_dssp --TCSEEEECCCCSSSS---------------TTTTTHHHHHHHHH----HSCCC--------SEEEC-SCCSSCTTSCC
T ss_pred --CCCEEEECCccccch---------------hhHHHHHHHHHHHH----hcCCC--------ceEEe-cCCcCCccccc
Confidence 589999999964321 25666666666553 332 2 56764 4332111
Q ss_pred -c-CccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChH--------HHHHhhhhhhcccCCC
Q 025672 162 -A-TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPE--------EIRSKATDYMAAYKFG 231 (249)
Q Consensus 162 -~-~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~--------~~~~~~~~~~~~~~~~ 231 (249)
+ .+....| .+|.+++.+.+ ..|++++.+.||++.+. ........ .....+........+.
T Consensus 126 ~~~~p~~~~y-~sK~~~e~~~~--------~~g~~~~ilrp~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i 195 (313)
T 1qyd_A 126 HALQPGSITF-IDKRKVRRAIE--------AASIPYTYVSSNMFAGY-FAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWV 195 (313)
T ss_dssp CCCSSTTHHH-HHHHHHHHHHH--------HTTCCBCEEECCEEHHH-HTTTSSCTTCCSSCCSSEECCBTTSCSEEEEE
T ss_pred cCCCCCcchH-HHHHHHHHHHH--------hcCCCeEEEEeceeccc-cccccccccccccCCCCeEEEeCCCCceEEEE
Confidence 1 1335678 99999887764 23688889999998742 21111100 0000000111122356
Q ss_pred CHHHHHHHHHHhccCC
Q 025672 232 EKWDIAMAALYLASDA 247 (249)
Q Consensus 232 ~~~dva~~v~~l~s~~ 247 (249)
+++|+|+++..++.+.
T Consensus 196 ~~~Dva~~~~~~l~~~ 211 (313)
T 1qyd_A 196 DEDDVGTYTIKSIDDP 211 (313)
T ss_dssp CHHHHHHHHHHHTTCG
T ss_pred EHHHHHHHHHHHHhCc
Confidence 8999999999998653
|
| >2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* | Back alignment and structure |
|---|
Probab=99.67 E-value=2.5e-16 Score=131.49 Aligned_cols=183 Identities=17% Similarity=0.208 Sum_probs=116.3
Q ss_pred cEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCccE
Q 025672 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI 92 (249)
Q Consensus 13 k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ 92 (249)
++++||||+|+||++++++|+++|++|++++|+........+++.. ..+.++++|++|++++.++++ .+|+
T Consensus 12 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~--~~v~~v~~Dl~d~~~l~~a~~-------~~d~ 82 (318)
T 2r6j_A 12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQS--LGAIIVKGELDEHEKLVELMK-------KVDV 82 (318)
T ss_dssp CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHH--TTCEEEECCTTCHHHHHHHHT-------TCSE
T ss_pred CeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhc--CCCEEEEecCCCHHHHHHHHc-------CCCE
Confidence 5799999999999999999999999999999987522222233332 357899999999999888775 5899
Q ss_pred EEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CCCCCCCCCceEEEeccccccc-----c-Ccc
Q 025672 93 LVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGG-RGQASSSSGGIIINISATLHYT-----A-TWY 165 (249)
Q Consensus 93 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~~~~~~g~iv~iss~~~~~-----~-~~~ 165 (249)
|||+++... +.+..++++++ .+.+ . .+||+ |+ .+.. + .+.
T Consensus 83 vi~~a~~~~-------------------~~~~~~l~~aa----~~~g~v--------~~~v~-S~-~g~~~~~~~~~~p~ 129 (318)
T 2r6j_A 83 VISALAFPQ-------------------ILDQFKILEAI----KVAGNI--------KRFLP-SD-FGVEEDRINALPPF 129 (318)
T ss_dssp EEECCCGGG-------------------STTHHHHHHHH----HHHCCC--------CEEEC-SC-CSSCTTTCCCCHHH
T ss_pred EEECCchhh-------------------hHHHHHHHHHH----HhcCCC--------CEEEe-ec-cccCcccccCCCCc
Confidence 999998421 22334444444 3332 2 45663 43 3311 1 122
Q ss_pred chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCC----ChHHHHHhhhhhhcccCCCCHHHHHHHHH
Q 025672 166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL----APEEIRSKATDYMAAYKFGEKWDIAMAAL 241 (249)
Q Consensus 166 ~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~dva~~v~ 241 (249)
...| .+|.+++.+.+. .|++++.+.||++... ..... .................+.+++|+++++.
T Consensus 130 ~~~y-~sK~~~e~~~~~--------~~~~~~~lr~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~ 199 (318)
T 2r6j_A 130 EALI-ERKRMIRRAIEE--------ANIPYTYVSANCFASY-FINYLLRPYDPKDEITVYGTGEAKFAMNYEQDIGLYTI 199 (318)
T ss_dssp HHHH-HHHHHHHHHHHH--------TTCCBEEEECCEEHHH-HHHHHHCTTCCCSEEEEETTSCCEEEEECHHHHHHHHH
T ss_pred chhH-HHHHHHHHHHHh--------cCCCeEEEEcceehhh-hhhhhccccCCCCceEEecCCCceeeEeeHHHHHHHHH
Confidence 4568 999988877642 3688888999988632 11000 00000000001111223567899999999
Q ss_pred HhccCC
Q 025672 242 YLASDA 247 (249)
Q Consensus 242 ~l~s~~ 247 (249)
.++.+.
T Consensus 200 ~~l~~~ 205 (318)
T 2r6j_A 200 KVATDP 205 (318)
T ss_dssp HHTTCG
T ss_pred HHhcCc
Confidence 998653
|
| >3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} | Back alignment and structure |
|---|
Probab=99.67 E-value=2.8e-16 Score=131.37 Aligned_cols=185 Identities=13% Similarity=0.081 Sum_probs=117.1
Q ss_pred CcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCc-c----hHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHH
Q 025672 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK-T----VLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (249)
Q Consensus 12 ~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~-~----~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 86 (249)
.++++||||+|+||++++++|+++|++|++++|+. . ...+...++.. ..+.++.+|++|.+++.++++
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~--~~v~~v~~D~~d~~~l~~a~~----- 76 (321)
T 3c1o_A 4 MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRS--MGVTIIEGEMEEHEKMVSVLK----- 76 (321)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHH--TTCEEEECCTTCHHHHHHHHT-----
T ss_pred ccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhc--CCcEEEEecCCCHHHHHHHHc-----
Confidence 36799999999999999999999999999999986 2 11122222322 358899999999999888775
Q ss_pred hCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CCCCCCCCCceEEEeccccccc----
Q 025672 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGG-RGQASSSSGGIIINISATLHYT---- 161 (249)
Q Consensus 87 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~~~~~~g~iv~iss~~~~~---- 161 (249)
.+|+|||+++... +.+..++++++ .+.+ . .+|| .|..+..
T Consensus 77 --~~d~vi~~a~~~~-------------------~~~~~~l~~aa----~~~g~v--------~~~v--~S~~g~~~~~~ 121 (321)
T 3c1o_A 77 --QVDIVISALPFPM-------------------ISSQIHIINAI----KAAGNI--------KRFL--PSDFGCEEDRI 121 (321)
T ss_dssp --TCSEEEECCCGGG-------------------SGGGHHHHHHH----HHHCCC--------CEEE--CSCCSSCGGGC
T ss_pred --CCCEEEECCCccc-------------------hhhHHHHHHHH----HHhCCc--------cEEe--ccccccCcccc
Confidence 4899999998521 33334444444 3332 2 4576 3433321
Q ss_pred --cCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccccccc---CC---CChHHHHHhhhhhhcccCCCCH
Q 025672 162 --ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGV---SK---LAPEEIRSKATDYMAAYKFGEK 233 (249)
Q Consensus 162 --~~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~---~~---~~~~~~~~~~~~~~~~~~~~~~ 233 (249)
..+....| .+|.+++.+++. . |++++.|.||++.+.... .. .........+........+.++
T Consensus 122 ~~~~p~~~~y-~sK~~~e~~~~~----~----~~~~~~lrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 192 (321)
T 3c1o_A 122 KPLPPFESVL-EKKRIIRRAIEA----A----ALPYTYVSANCFGAYFVNYLLHPSPHPNRNDDIVIYGTGETKFVLNYE 192 (321)
T ss_dssp CCCHHHHHHH-HHHHHHHHHHHH----H----TCCBEEEECCEEHHHHHHHHHCCCSSCCTTSCEEEETTSCCEEEEECH
T ss_pred ccCCCcchHH-HHHHHHHHHHHH----c----CCCeEEEEeceeccccccccccccccccccCceEEecCCCcceeEeeH
Confidence 11224579 999999887752 2 578888999988642110 00 0000000000011112346689
Q ss_pred HHHHHHHHHhccCC
Q 025672 234 WDIAMAALYLASDA 247 (249)
Q Consensus 234 ~dva~~v~~l~s~~ 247 (249)
+|+|+++.+++++.
T Consensus 193 ~Dva~~~~~~l~~~ 206 (321)
T 3c1o_A 193 EDIAKYTIKVACDP 206 (321)
T ss_dssp HHHHHHHHHHHHCG
T ss_pred HHHHHHHHHHHhCc
Confidence 99999999998653
|
| >1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.66 E-value=5e-16 Score=128.93 Aligned_cols=185 Identities=15% Similarity=0.083 Sum_probs=117.2
Q ss_pred CcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchH--HH---HHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHH
Q 025672 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVL--RS---AVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (249)
Q Consensus 12 ~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~--~~---~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 86 (249)
.++++||||+|+||++++++|+++|++|++++|+.... .. ..+++. ...+.++++|++|++++.++++
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~--~~~v~~v~~D~~d~~~l~~~~~----- 76 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFK--ASGANIVHGSIDDHASLVEAVK----- 76 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHH--TTTCEEECCCTTCHHHHHHHHH-----
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHH--hCCCEEEEeccCCHHHHHHHHc-----
Confidence 46799999999999999999999999999999985422 11 112232 3468899999999999888876
Q ss_pred hCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CCCCCCCCCceEEEeccccccc----
Q 025672 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGG-RGQASSSSGGIIINISATLHYT---- 161 (249)
Q Consensus 87 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~~~~~~g~iv~iss~~~~~---- 161 (249)
.+|+|||+++... +.+..++++++. +.+ . .+||+ |+.....
T Consensus 77 --~~d~vi~~a~~~~-------------------~~~~~~l~~aa~----~~g~v--------~~~v~-S~~g~~~~~~~ 122 (308)
T 1qyc_A 77 --NVDVVISTVGSLQ-------------------IESQVNIIKAIK----EVGTV--------KRFFP-SEFGNDVDNVH 122 (308)
T ss_dssp --TCSEEEECCCGGG-------------------SGGGHHHHHHHH----HHCCC--------SEEEC-SCCSSCTTSCC
T ss_pred --CCCEEEECCcchh-------------------hhhHHHHHHHHH----hcCCC--------ceEee-cccccCccccc
Confidence 4899999998421 233344444443 332 2 45763 4432111
Q ss_pred c-CccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCCh-------HHHHHhhhhhhcccCCCCH
Q 025672 162 A-TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP-------EEIRSKATDYMAAYKFGEK 233 (249)
Q Consensus 162 ~-~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~ 233 (249)
+ .+....| .+|.+++.+.+. .|++++.+.||++.+.. ...... ...............+.++
T Consensus 123 ~~~p~~~~y-~sK~~~e~~~~~--------~~~~~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 192 (308)
T 1qyc_A 123 AVEPAKSVF-EVKAKVRRAIEA--------EGIPYTYVSSNCFAGYF-LRSLAQAGLTAPPRDKVVILGDGNARVVFVKE 192 (308)
T ss_dssp CCTTHHHHH-HHHHHHHHHHHH--------HTCCBEEEECCEEHHHH-TTTTTCTTCSSCCSSEEEEETTSCCEEEEECH
T ss_pred cCCcchhHH-HHHHHHHHHHHh--------cCCCeEEEEeceecccc-ccccccccccCCCCCceEEecCCCceEEEecH
Confidence 1 2334678 999988877653 25788889999886422 111100 0000000011112235678
Q ss_pred HHHHHHHHHhccCC
Q 025672 234 WDIAMAALYLASDA 247 (249)
Q Consensus 234 ~dva~~v~~l~s~~ 247 (249)
+|+|+++..++++.
T Consensus 193 ~Dva~~~~~~l~~~ 206 (308)
T 1qyc_A 193 EDIGTFTIKAVDDP 206 (308)
T ss_dssp HHHHHHHHTTSSCG
T ss_pred HHHHHHHHHHHhCc
Confidence 99999999988653
|
| >1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* | Back alignment and structure |
|---|
Probab=99.49 E-value=7e-15 Score=121.26 Aligned_cols=110 Identities=16% Similarity=0.271 Sum_probs=85.9
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
.++++|+++||||+||+|++++..|++.|++|++++|+.++.+++.+++... ..+.++.+|++++++++++++
T Consensus 115 ~~l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~-~~~~~~~~D~~~~~~~~~~~~------ 187 (287)
T 1lu9_A 115 GSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKR-FKVNVTAAETADDASRAEAVK------ 187 (287)
T ss_dssp SCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH-HTCCCEEEECCSHHHHHHHTT------
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhc-CCcEEEEecCCCHHHHHHHHH------
Confidence 4578999999999999999999999999999999999998888888887543 246778899999998877665
Q ss_pred CCccEEEEcCCCCC-CCCCCCCCH-HHHHHHHhhhhHHHH
Q 025672 88 GKLDILVNAAAGNF-LVPAEDLSP-NGFRTVIEIDSVGTF 125 (249)
Q Consensus 88 ~~id~vi~~ag~~~-~~~~~~~~~-~~~~~~~~~n~~~~~ 125 (249)
.+|+||||+|... ..++.+.+. +++...+++|+.+++
T Consensus 188 -~~DvlVn~ag~g~~~~~~~~~~~~~~~~~~~dvn~~~~~ 226 (287)
T 1lu9_A 188 -GAHFVFTAGAIGLELLPQAAWQNESSIEIVADYNAQPPL 226 (287)
T ss_dssp -TCSEEEECCCTTCCSBCHHHHTTCTTCCEEEECCCSSSC
T ss_pred -hCCEEEECCCccccCCChhHcCchHHHHHHHHhhhhhhH
Confidence 4799999998542 222222232 455567888887755
|
| >4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.45 E-value=2.7e-12 Score=105.99 Aligned_cols=188 Identities=14% Similarity=0.066 Sum_probs=116.3
Q ss_pred EEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCccEE
Q 025672 14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDIL 93 (249)
Q Consensus 14 ~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~v 93 (249)
++|||||+|.||++++++|.++|++|+++.|++.. .. +..| ++ ..+.+..+|.|
T Consensus 2 kILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~------------~~---~~~~-----~~------~~~~l~~~d~v 55 (298)
T 4b4o_A 2 RVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGP------------GR---ITWD-----EL------AASGLPSCDAA 55 (298)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCT------------TE---EEHH-----HH------HHHCCCSCSEE
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCc------------Ce---eecc-----hh------hHhhccCCCEE
Confidence 58999999999999999999999999999997642 11 1111 11 11234679999
Q ss_pred EEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC----------
Q 025672 94 VNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT---------- 163 (249)
Q Consensus 94 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~---------- 163 (249)
||.||.....+....+.......++.|+.++.++++++...-.+ ..++|+.||...+...
T Consensus 56 ihla~~~i~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~~~----------~~~~i~~Ss~~vyg~~~~~~~~E~~p 125 (298)
T 4b4o_A 56 VNLAGENILNPLRRWNETFQKEVLGSRLETTQLLAKAITKAPQP----------PKAWVLVTGVAYYQPSLTAEYDEDSP 125 (298)
T ss_dssp EECCCCCSSCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHCSSC----------CSEEEEEEEGGGSCCCSSCCBCTTCC
T ss_pred EEeccCcccchhhhhhhhhhhhhhhHHHHHHHHHHHHHHHhCCC----------ceEEEEEeeeeeecCCCCCcccccCC
Confidence 99998644444444566777888899999988887766533111 1446777776544321
Q ss_pred -ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhh--hhc------ccCCCCHH
Q 025672 164 -WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATD--YMA------AYKFGEKW 234 (249)
Q Consensus 164 -~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~--~~~------~~~~~~~~ 234 (249)
.+...|+..+...+. ..... ..++++..+.||.|..+... . ...+...... ..+ ...+...+
T Consensus 126 ~~~~~~~~~~~~~~e~-----~~~~~-~~~~~~~~~r~~~v~g~~~~--~-~~~~~~~~~~~~~~~~g~g~~~~~~ihv~ 196 (298)
T 4b4o_A 126 GGDFDFFSNLVTKWEA-----AARLP-GDSTRQVVVRSGVVLGRGGG--A-MGHMLLPFRLGLGGPIGSGHQFFPWIHIG 196 (298)
T ss_dssp CSCSSHHHHHHHHHHH-----HHCCS-SSSSEEEEEEECEEECTTSH--H-HHHHHHHHHTTCCCCBTTSCSBCCEEEHH
T ss_pred ccccchhHHHHHHHHH-----HHHhh-ccCCceeeeeeeeEEcCCCC--c-hhHHHHHHhcCCcceecccCceeecCcHH
Confidence 122334444433322 12233 67899999999999865321 0 1111111111 011 11234689
Q ss_pred HHHHHHHHhccC
Q 025672 235 DIAMAALYLASD 246 (249)
Q Consensus 235 dva~~v~~l~s~ 246 (249)
|+++++.+++..
T Consensus 197 Dva~a~~~~~~~ 208 (298)
T 4b4o_A 197 DLAGILTHALEA 208 (298)
T ss_dssp HHHHHHHHHHHC
T ss_pred HHHHHHHHHHhC
Confidence 999999998854
|
| >1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A* | Back alignment and structure |
|---|
Probab=99.29 E-value=9e-12 Score=104.47 Aligned_cols=150 Identities=10% Similarity=0.094 Sum_probs=103.1
Q ss_pred cEEEEecCCCchhHHHHHHHHHcCC-------eEEEEeCCc--chHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHH
Q 025672 13 KVALLTGGGSGIGFEISLQLGKHGA-------AIAIMGRRK--TVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVEST 83 (249)
Q Consensus 13 k~~lItGa~~giG~~~a~~l~~~G~-------~v~l~~r~~--~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 83 (249)
++++||||+|+||.+++..|+++|. +|++++++. +..+....++.+.. +.++ .|+.+.+++..++
T Consensus 5 mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~~--~~~~-~di~~~~~~~~a~--- 78 (327)
T 1y7t_A 5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCA--FPLL-AGLEATDDPKVAF--- 78 (327)
T ss_dssp EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTT--CTTE-EEEEEESCHHHHT---
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhccc--cccc-CCeEeccChHHHh---
Confidence 5799999999999999999999996 799999875 22333333443221 2233 5776655544443
Q ss_pred HHHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccc----
Q 025672 84 INHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH---- 159 (249)
Q Consensus 84 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~---- 159 (249)
...|+|||.||.... + .. +....+++|+.++.++++++...- +. ..+++++|+...
T Consensus 79 ----~~~D~Vih~Ag~~~~-~--~~---~~~~~~~~Nv~~t~~l~~a~~~~~---~~-------~~~vvv~snp~~~~~~ 138 (327)
T 1y7t_A 79 ----KDADYALLVGAAPRK-A--GM---ERRDLLQVNGKIFTEQGRALAEVA---KK-------DVKVLVVGNPANTNAL 138 (327)
T ss_dssp ----TTCSEEEECCCCCCC-T--TC---CHHHHHHHHHHHHHHHHHHHHHHS---CT-------TCEEEECSSSHHHHHH
T ss_pred ----CCCCEEEECCCcCCC-C--CC---CHHHHHHHHHHHHHHHHHHHHhhc---CC-------CeEEEEeCCchhhhHH
Confidence 358999999996532 1 12 235678999999999998887541 01 156888877541
Q ss_pred ----cc-cCccchhhHHHHHHHHHHHHHHHHHhc
Q 025672 160 ----YT-ATWYQIHVSAAKAAVDSITRSLALEWG 188 (249)
Q Consensus 160 ----~~-~~~~~~~y~~sK~a~~~l~~~la~e~~ 188 (249)
.. +.++...|+.+|...+.+.+.+++.++
T Consensus 139 ~~~~~~~~~~p~~~yg~tkl~~er~~~~~a~~~g 172 (327)
T 1y7t_A 139 IAYKNAPGLNPRNFTAMTRLDHNRAKAQLAKKTG 172 (327)
T ss_dssp HHHHTCTTSCGGGEEECCHHHHHHHHHHHHHHHT
T ss_pred HHHHHcCCCChhheeccchHHHHHHHHHHHHHhC
Confidence 11 234555699999999999988887664
|
| >1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A* | Back alignment and structure |
|---|
Probab=99.20 E-value=6.8e-11 Score=93.06 Aligned_cols=83 Identities=19% Similarity=0.194 Sum_probs=63.5
Q ss_pred CCCCcEEEEecC----------------CCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCC
Q 025672 9 ILKGKVALLTGG----------------GSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK 72 (249)
Q Consensus 9 ~l~~k~~lItGa----------------~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~ 72 (249)
+|+||++||||| +||||+++|++|+++|++|++++++.. ++ ....+. .+|+++
T Consensus 5 ~l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~-l~--------~~~g~~--~~dv~~ 73 (226)
T 1u7z_A 5 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVS-LP--------TPPFVK--RVDVMT 73 (226)
T ss_dssp TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCC-CC--------CCTTEE--EEECCS
T ss_pred CCCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCcc-cc--------cCCCCe--EEccCc
Confidence 578999999999 689999999999999999999987652 11 011222 457777
Q ss_pred HHHHHHHHHHHHHHhCCccEEEEcCCCCCCCCC
Q 025672 73 REDAVRVVESTINHFGKLDILVNAAAGNFLVPA 105 (249)
Q Consensus 73 ~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~ 105 (249)
.+ ++++.+.+.++++|++|||||+....++
T Consensus 74 ~~---~~~~~v~~~~~~~Dili~~Aav~d~~p~ 103 (226)
T 1u7z_A 74 AL---EMEAAVNASVQQQNIFIGCAAVADYRAA 103 (226)
T ss_dssp HH---HHHHHHHHHGGGCSEEEECCBCCSEEES
T ss_pred HH---HHHHHHHHhcCCCCEEEECCcccCCCCc
Confidence 54 4566677788999999999998754443
|
| >2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
Probab=99.05 E-value=7.1e-11 Score=93.17 Aligned_cols=84 Identities=12% Similarity=0.165 Sum_probs=62.3
Q ss_pred CCcEEEEecC----------------CCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHH
Q 025672 11 KGKVALLTGG----------------GSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKRE 74 (249)
Q Consensus 11 ~~k~~lItGa----------------~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~ 74 (249)
+||++||||| +|++|.++|++|+++|++|++++|+... .. .....+.++ |+ +
T Consensus 2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~-~~------~~~~~~~~~--~v---~ 69 (232)
T 2gk4_A 2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRAL-KP------EPHPNLSIR--EI---T 69 (232)
T ss_dssp -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSC-CC------CCCTTEEEE--EC---C
T ss_pred CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCccc-cc------cCCCCeEEE--EH---h
Confidence 5899999999 7789999999999999999999987542 10 001223333 33 4
Q ss_pred HHHHHHHHHHHHhCCccEEEEcCCCCCCCCCC
Q 025672 75 DAVRVVESTINHFGKLDILVNAAAGNFLVPAE 106 (249)
Q Consensus 75 ~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~ 106 (249)
+++++++.+.+.++++|++|+||++....+..
T Consensus 70 s~~em~~~v~~~~~~~Dili~aAAvsD~~p~~ 101 (232)
T 2gk4_A 70 NTKDLLIEMQERVQDYQVLIHSMAVSDYTPVY 101 (232)
T ss_dssp SHHHHHHHHHHHGGGCSEEEECSBCCSEEEEE
T ss_pred HHHHHHHHHHHhcCCCCEEEEcCccccccchh
Confidence 66777777777889999999999987655443
|
| >3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi} | Back alignment and structure |
|---|
Probab=99.05 E-value=1.2e-09 Score=77.17 Aligned_cols=74 Identities=14% Similarity=0.153 Sum_probs=62.4
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcC-CeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCC
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHG-AAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK 89 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G-~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 89 (249)
.+++++|+|+ |++|+.+++.|.+.| ++|++++|+.++.+.+. ...+.++.+|+++.+++.++++ .
T Consensus 4 ~~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~------~~~~~~~~~d~~~~~~~~~~~~-------~ 69 (118)
T 3ic5_A 4 MRWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN------RMGVATKQVDAKDEAGLAKALG-------G 69 (118)
T ss_dssp TCEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH------TTTCEEEECCTTCHHHHHHHTT-------T
T ss_pred CcCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH------hCCCcEEEecCCCHHHHHHHHc-------C
Confidence 3578999999 999999999999999 89999999987766544 2356788999999988777653 6
Q ss_pred ccEEEEcCC
Q 025672 90 LDILVNAAA 98 (249)
Q Consensus 90 id~vi~~ag 98 (249)
+|+||++++
T Consensus 70 ~d~vi~~~~ 78 (118)
T 3ic5_A 70 FDAVISAAP 78 (118)
T ss_dssp CSEEEECSC
T ss_pred CCEEEECCC
Confidence 899999996
|
| >3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A* | Back alignment and structure |
|---|
Probab=98.98 E-value=6.3e-10 Score=83.23 Aligned_cols=77 Identities=18% Similarity=0.124 Sum_probs=65.9
Q ss_pred CchhHHHHHHHHHcCCeEEEEeCCcchHH---HHHHHHHhcCCCeeEEEccCCCH--HHHHHHHHHHHHHhCCccEEEEc
Q 025672 22 SGIGFEISLQLGKHGAAIAIMGRRKTVLR---SAVAALHSLGIPAIGLEGDVRKR--EDAVRVVESTINHFGKLDILVNA 96 (249)
Q Consensus 22 ~giG~~~a~~l~~~G~~v~l~~r~~~~~~---~~~~~~~~~~~~~~~~~~Dl~~~--~~~~~~~~~~~~~~~~id~vi~~ 96 (249)
+-++.++++.|++.|++|++..|+..+.+ ...+.+...|.++..+.+|++++ ++++++++.+.+.+|+ |++|||
T Consensus 26 ~~p~~a~a~~La~~Ga~vvi~~r~~~e~~~~~~~~~~~~~~G~~~~~i~~Dv~~~~~~~v~~~~~~i~~~~G~-dVLVnn 104 (157)
T 3gxh_A 26 GLPNEQQFSLLKQAGVDVVINLMPDSSKDAHPDEGKLVTQAGMDYVYIPVDWQNPKVEDVEAFFAAMDQHKGK-DVLVHC 104 (157)
T ss_dssp BCCCHHHHHHHHHTTCCEEEECSCTTSTTSCTTHHHHHHHTTCEEEECCCCTTSCCHHHHHHHHHHHHHTTTS-CEEEEC
T ss_pred CCCCHHHHHHHHHcCCCEEEECCCcccccccccHHHHHHHcCCeEEEecCCCCCCCHHHHHHHHHHHHhcCCC-CEEEEC
Confidence 45889999999999999999988765432 24556666788889999999999 9999999999998999 999999
Q ss_pred CCC
Q 025672 97 AAG 99 (249)
Q Consensus 97 ag~ 99 (249)
+|+
T Consensus 105 Agg 107 (157)
T 3gxh_A 105 LAN 107 (157)
T ss_dssp SBS
T ss_pred CCC
Confidence 995
|
| >4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes} | Back alignment and structure |
|---|
Probab=98.93 E-value=6.6e-09 Score=89.46 Aligned_cols=81 Identities=16% Similarity=0.167 Sum_probs=71.0
Q ss_pred cEEEEecCCCchhHHHHHHHHHcC---CeEEEEeCCcchHHHHHHHHHhc-CCCeeEEEccCCCHHHHHHHHHHHHHHhC
Q 025672 13 KVALLTGGGSGIGFEISLQLGKHG---AAIAIMGRRKTVLRSAVAALHSL-GIPAIGLEGDVRKREDAVRVVESTINHFG 88 (249)
Q Consensus 13 k~~lItGa~~giG~~~a~~l~~~G---~~v~l~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 88 (249)
++++|+|+ |+||+++++.|++.| .+|++++|+.++++++.+++... +.++.++.+|++|.+++++++++.
T Consensus 2 ~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~----- 75 (405)
T 4ina_A 2 AKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEV----- 75 (405)
T ss_dssp CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHH-----
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhh-----
Confidence 47899999 899999999999998 38999999999999998888653 246889999999999999998875
Q ss_pred CccEEEEcCCC
Q 025672 89 KLDILVNAAAG 99 (249)
Q Consensus 89 ~id~vi~~ag~ 99 (249)
++|+||||++.
T Consensus 76 ~~DvVin~ag~ 86 (405)
T 4ina_A 76 KPQIVLNIALP 86 (405)
T ss_dssp CCSEEEECSCG
T ss_pred CCCEEEECCCc
Confidence 69999999984
|
| >2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A* | Back alignment and structure |
|---|
Probab=98.75 E-value=2.9e-09 Score=94.58 Aligned_cols=100 Identities=16% Similarity=0.169 Sum_probs=68.3
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhC
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 88 (249)
.+++|+++|||| ||+|++++..|++.|++|++++|+.++++++.+++. .++. ++.+ ++.+ ..+
T Consensus 361 ~l~~k~vlV~Ga-GGig~aia~~L~~~G~~V~i~~R~~~~a~~la~~~~---~~~~----~~~d---l~~~------~~~ 423 (523)
T 2o7s_A 361 PLASKTVVVIGA-GGAGKALAYGAKEKGAKVVIANRTYERALELAEAIG---GKAL----SLTD---LDNY------HPE 423 (523)
T ss_dssp -----CEEEECC-SHHHHHHHHHHHHHCC-CEEEESSHHHHHHHHHHTT---C-CE----ETTT---TTTC--------C
T ss_pred ccCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcC---Ccee----eHHH---hhhc------ccc
Confidence 478999999999 599999999999999999999999988888877662 2222 2222 1100 113
Q ss_pred CccEEEEcCCCCCC-----CCCCCCCHHHHHHHHhhhhHHHH
Q 025672 89 KLDILVNAAAGNFL-----VPAEDLSPNGFRTVIEIDSVGTF 125 (249)
Q Consensus 89 ~id~vi~~ag~~~~-----~~~~~~~~~~~~~~~~~n~~~~~ 125 (249)
.+|++|||+|.... .++.+.+.+++...+++|+.+..
T Consensus 424 ~~DilVN~agvg~~~~~~~~~~~~~~~~~~~~v~Dvny~p~~ 465 (523)
T 2o7s_A 424 DGMVLANTTSMGMQPNVEETPISKDALKHYALVFDAVYTPRI 465 (523)
T ss_dssp CSEEEEECSSTTCTTCTTCCSSCTTTGGGEEEEEECCCSSSS
T ss_pred CceEEEECCCCCCCCCCCCCCCChHHcCcCcEEEEEeeCCcc
Confidence 58999999997432 34555667778889999988653
|
| >1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A | Back alignment and structure |
|---|
Probab=98.75 E-value=1.6e-08 Score=88.10 Aligned_cols=78 Identities=15% Similarity=0.112 Sum_probs=62.9
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCc
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 90 (249)
++|+++|+| +|++|+++++.|++.|++|++++|+.++.+.+.+++ ..+..+.+|++|.++++++++ .+
T Consensus 2 ~~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~----~~~~~~~~Dv~d~~~l~~~l~-------~~ 69 (450)
T 1ff9_A 2 ATKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGV----QHSTPISLDVNDDAALDAEVA-------KH 69 (450)
T ss_dssp CCCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTTC----TTEEEEECCTTCHHHHHHHHT-------TS
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHhc----CCceEEEeecCCHHHHHHHHc-------CC
Confidence 468899998 799999999999999999999999987665544322 236788999999988877763 69
Q ss_pred cEEEEcCCCC
Q 025672 91 DILVNAAAGN 100 (249)
Q Consensus 91 d~vi~~ag~~ 100 (249)
|+|||+++..
T Consensus 70 DvVIn~a~~~ 79 (450)
T 1ff9_A 70 DLVISLIPYT 79 (450)
T ss_dssp SEEEECCC--
T ss_pred cEEEECCccc
Confidence 9999999853
|
| >1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5 | Back alignment and structure |
|---|
Probab=98.75 E-value=3.8e-09 Score=86.81 Aligned_cols=81 Identities=20% Similarity=0.231 Sum_probs=61.8
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhC
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 88 (249)
++++|+++|||++ |+|++++..|++.| +|++++|+.++++++.+++...+.....+.+|+++. .+.++
T Consensus 125 ~l~~k~vlV~GaG-giG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~~~~~~~~d~~~~----------~~~~~ 192 (287)
T 1nvt_A 125 RVKDKNIVIYGAG-GAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSGL----------DVDLD 192 (287)
T ss_dssp CCCSCEEEEECCS-HHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEECT----------TCCCT
T ss_pred CcCCCEEEEECch-HHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhcccccceeEEEeeH----------HHhhC
Confidence 5789999999997 99999999999999 999999999888888887754211001123455542 23457
Q ss_pred CccEEEEcCCCCC
Q 025672 89 KLDILVNAAAGNF 101 (249)
Q Consensus 89 ~id~vi~~ag~~~ 101 (249)
++|+||||+|...
T Consensus 193 ~~DilVn~ag~~~ 205 (287)
T 1nvt_A 193 GVDIIINATPIGM 205 (287)
T ss_dssp TCCEEEECSCTTC
T ss_pred CCCEEEECCCCCC
Confidence 8999999999654
|
| >1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1 | Back alignment and structure |
|---|
Probab=98.73 E-value=3.1e-08 Score=76.60 Aligned_cols=79 Identities=23% Similarity=0.233 Sum_probs=58.2
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCc
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 90 (249)
.+++++|+||+||||..++..+...|++|+++++++++.+.+. ..+... .+|.++.+..+.+.+... .+++
T Consensus 38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~----~~g~~~---~~d~~~~~~~~~~~~~~~--~~~~ 108 (198)
T 1pqw_A 38 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLS----RLGVEY---VGDSRSVDFADEILELTD--GYGV 108 (198)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH----TTCCSE---EEETTCSTHHHHHHHHTT--TCCE
T ss_pred CCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH----HcCCCE---EeeCCcHHHHHHHHHHhC--CCCC
Confidence 5899999999999999999999999999999999877655432 234322 247777655444433221 1369
Q ss_pred cEEEEcCC
Q 025672 91 DILVNAAA 98 (249)
Q Consensus 91 d~vi~~ag 98 (249)
|++|+|+|
T Consensus 109 D~vi~~~g 116 (198)
T 1pqw_A 109 DVVLNSLA 116 (198)
T ss_dssp EEEEECCC
T ss_pred eEEEECCc
Confidence 99999997
|
| >1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A* | Back alignment and structure |
|---|
Probab=98.70 E-value=2.5e-08 Score=83.59 Aligned_cols=79 Identities=8% Similarity=0.125 Sum_probs=61.4
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCc
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 90 (249)
.++++||||++||||..++..+...|++|++++++.++++.+ +++ +.. ..+|.++.+++.+.+.+... +++
T Consensus 145 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~-~~~---g~~---~~~d~~~~~~~~~~~~~~~~--~~~ 215 (333)
T 1v3u_A 145 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYL-KQI---GFD---AAFNYKTVNSLEEALKKASP--DGY 215 (333)
T ss_dssp SSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHT---TCS---EEEETTSCSCHHHHHHHHCT--TCE
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-Hhc---CCc---EEEecCCHHHHHHHHHHHhC--CCC
Confidence 589999999999999999999999999999999988776655 333 332 23588775555555554432 579
Q ss_pred cEEEEcCC
Q 025672 91 DILVNAAA 98 (249)
Q Consensus 91 d~vi~~ag 98 (249)
|++|+|+|
T Consensus 216 d~vi~~~g 223 (333)
T 1v3u_A 216 DCYFDNVG 223 (333)
T ss_dssp EEEEESSC
T ss_pred eEEEECCC
Confidence 99999998
|
| >2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=98.70 E-value=2.1e-08 Score=85.26 Aligned_cols=78 Identities=15% Similarity=0.161 Sum_probs=62.5
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhC
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 88 (249)
.+++++++|+|+ |+||+.+++.+...|++|++++|+.++++.+.+.+ +.. +.+|.++.+++++++.
T Consensus 163 ~l~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~---g~~---~~~~~~~~~~l~~~~~------- 228 (369)
T 2eez_A 163 GVAPASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVF---GGR---VITLTATEANIKKSVQ------- 228 (369)
T ss_dssp BBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT---TTS---EEEEECCHHHHHHHHH-------
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhc---Cce---EEEecCCHHHHHHHHh-------
Confidence 478999999999 99999999999999999999999988776655433 333 4568888888777654
Q ss_pred CccEEEEcCCCC
Q 025672 89 KLDILVNAAAGN 100 (249)
Q Consensus 89 ~id~vi~~ag~~ 100 (249)
..|+||++++..
T Consensus 229 ~~DvVi~~~g~~ 240 (369)
T 2eez_A 229 HADLLIGAVLVP 240 (369)
T ss_dssp HCSEEEECCC--
T ss_pred CCCEEEECCCCC
Confidence 489999999853
|
| >3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A* | Back alignment and structure |
|---|
Probab=98.66 E-value=7e-10 Score=96.35 Aligned_cols=45 Identities=24% Similarity=0.347 Sum_probs=39.6
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHH
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAV 53 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~ 53 (249)
..+.||+++|||++ +||+++|+.|...|++|+++++++.+.++..
T Consensus 261 ~~L~GKtVvVtGaG-gIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa 305 (488)
T 3ond_A 261 VMIAGKVAVVAGYG-DVGKGCAAALKQAGARVIVTEIDPICALQAT 305 (488)
T ss_dssp CCCTTCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred CcccCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH
Confidence 45889999999987 9999999999999999999999887655544
|
| >2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.62 E-value=1.1e-07 Score=83.15 Aligned_cols=81 Identities=14% Similarity=0.125 Sum_probs=63.6
Q ss_pred CCCCCCcEEEEecCCCchhHHHHHHHHHc-CCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHH
Q 025672 7 GDILKGKVALLTGGGSGIGFEISLQLGKH-GAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN 85 (249)
Q Consensus 7 ~~~l~~k~~lItGa~~giG~~~a~~l~~~-G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 85 (249)
...+++++++|+|+ |++|++++..|++. |++|++++|+.++.+++.+. ..+.++.+|++|.+++.++++
T Consensus 18 ~~~l~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~-----~~~~~~~~D~~d~~~l~~~l~---- 87 (467)
T 2axq_A 18 EGRHMGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANAQALAKP-----SGSKAISLDVTDDSALDKVLA---- 87 (467)
T ss_dssp -----CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGG-----GTCEEEECCTTCHHHHHHHHH----
T ss_pred ccCCCCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHh-----cCCcEEEEecCCHHHHHHHHc----
Confidence 45677899999997 99999999999998 67999999998877766543 135677899999988877664
Q ss_pred HhCCccEEEEcCCCC
Q 025672 86 HFGKLDILVNAAAGN 100 (249)
Q Consensus 86 ~~~~id~vi~~ag~~ 100 (249)
.+|+|||+++..
T Consensus 88 ---~~DvVIn~tp~~ 99 (467)
T 2axq_A 88 ---DNDVVISLIPYT 99 (467)
T ss_dssp ---TSSEEEECSCGG
T ss_pred ---CCCEEEECCchh
Confidence 589999999853
|
| >3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A* | Back alignment and structure |
|---|
Probab=98.62 E-value=3.1e-07 Score=76.10 Aligned_cols=83 Identities=20% Similarity=0.235 Sum_probs=64.9
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCC-eEEEEeCC---cchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHH
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRR---KTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVEST 83 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~-~v~l~~r~---~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 83 (249)
.++++|+++|+|+ ||+|++++..|++.|+ +|++++|+ .++.+++++++..... +.+...++.+.+++.+.+.
T Consensus 150 ~~l~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~-~~~~~~~~~~~~~l~~~l~-- 225 (315)
T 3tnl_A 150 HDIIGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTD-CKAQLFDIEDHEQLRKEIA-- 225 (315)
T ss_dssp CCCTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSS-CEEEEEETTCHHHHHHHHH--
T ss_pred CCccCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcC-CceEEeccchHHHHHhhhc--
Confidence 4678999999998 7999999999999999 89999999 7888888888865322 3333456777666655443
Q ss_pred HHHhCCccEEEEcCCC
Q 025672 84 INHFGKLDILVNAAAG 99 (249)
Q Consensus 84 ~~~~~~id~vi~~ag~ 99 (249)
..|+|||+...
T Consensus 226 -----~aDiIINaTp~ 236 (315)
T 3tnl_A 226 -----ESVIFTNATGV 236 (315)
T ss_dssp -----TCSEEEECSST
T ss_pred -----CCCEEEECccC
Confidence 58999998764
|
| >1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5 | Back alignment and structure |
|---|
Probab=98.59 E-value=8.7e-08 Score=77.98 Aligned_cols=77 Identities=19% Similarity=0.264 Sum_probs=59.5
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhC
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 88 (249)
++++|+++|+|+ ||+|++++..|++.|++|++++|+.++++++.+++...+ .+. ..|+ +++ .+ +
T Consensus 116 ~l~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~~-~~~--~~~~---~~~-------~~--~ 179 (271)
T 1nyt_A 116 IRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTG-SIQ--ALSM---DEL-------EG--H 179 (271)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGS-SEE--ECCS---GGG-------TT--C
T ss_pred CcCCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhccC-Cee--EecH---HHh-------cc--C
Confidence 578999999998 799999999999999999999999998888887775432 222 1232 221 11 5
Q ss_pred CccEEEEcCCCCC
Q 025672 89 KLDILVNAAAGNF 101 (249)
Q Consensus 89 ~id~vi~~ag~~~ 101 (249)
..|+||++++...
T Consensus 180 ~~DivVn~t~~~~ 192 (271)
T 1nyt_A 180 EFDLIINATSSGI 192 (271)
T ss_dssp CCSEEEECCSCGG
T ss_pred CCCEEEECCCCCC
Confidence 8999999999644
|
| >2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.53 E-value=3e-07 Score=77.41 Aligned_cols=79 Identities=15% Similarity=0.120 Sum_probs=61.3
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCc
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 90 (249)
.|+++||+|++||||..++..+...|++|++++|++++++.+. + .+.. ..+|.++.+++.+.+.++... ++
T Consensus 169 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~-~---~g~~---~~~d~~~~~~~~~~~~~~~~~--~~ 239 (347)
T 2hcy_A 169 AGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFR-S---IGGE---VFIDFTKEKDIVGAVLKATDG--GA 239 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHH-H---TTCC---EEEETTTCSCHHHHHHHHHTS--CE
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHH-H---cCCc---eEEecCccHhHHHHHHHHhCC--CC
Confidence 5899999999999999999999999999999999887765432 2 2332 224888666666666655432 79
Q ss_pred cEEEEcCC
Q 025672 91 DILVNAAA 98 (249)
Q Consensus 91 d~vi~~ag 98 (249)
|++|+++|
T Consensus 240 D~vi~~~g 247 (347)
T 2hcy_A 240 HGVINVSV 247 (347)
T ss_dssp EEEEECSS
T ss_pred CEEEECCC
Confidence 99999998
|
| >1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A | Back alignment and structure |
|---|
Probab=98.50 E-value=1e-06 Score=73.72 Aligned_cols=157 Identities=9% Similarity=0.115 Sum_probs=100.7
Q ss_pred CcEEEEecCCCchhHHHHHHHHHcCC-------eEEEEeCC----cchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHH
Q 025672 12 GKVALLTGGGSGIGFEISLQLGKHGA-------AIAIMGRR----KTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVV 80 (249)
Q Consensus 12 ~k~~lItGa~~giG~~~a~~l~~~G~-------~v~l~~r~----~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~ 80 (249)
.++++||||+|.||..++..|+.+|. +|++++++ +++++....++.+....+ ..|+....+...++
T Consensus 5 ~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~~---~~~i~~~~~~~~al 81 (329)
T 1b8p_A 5 PMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPL---LAGMTAHADPMTAF 81 (329)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCTT---EEEEEEESSHHHHT
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhcccc---cCcEEEecCcHHHh
Confidence 46799999999999999999999885 79999998 555665555565421111 12444434433333
Q ss_pred HHHHHHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccc-
Q 025672 81 ESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH- 159 (249)
Q Consensus 81 ~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~- 159 (249)
...|+||+.||.... + ..+. ...+..|+.....+++.+..+- +. .++||++|....
T Consensus 82 -------~~aD~Vi~~ag~~~~-~--g~~r---~dl~~~N~~i~~~i~~~i~~~~---~p-------~a~ii~~SNPv~~ 138 (329)
T 1b8p_A 82 -------KDADVALLVGARPRG-P--GMER---KDLLEANAQIFTVQGKAIDAVA---SR-------NIKVLVVGNPANT 138 (329)
T ss_dssp -------TTCSEEEECCCCCCC-T--TCCH---HHHHHHHHHHHHHHHHHHHHHS---CT-------TCEEEECSSSHHH
T ss_pred -------CCCCEEEEeCCCCCC-C--CCCH---HHHHHHHHHHHHHHHHHHHHhc---CC-------CeEEEEccCchHH
Confidence 468999999996432 1 1232 3467888888888877776542 11 267899887442
Q ss_pred -------cc-cCccchhhHHHHHHHHHHHHHHHHHhc-CCCCeE
Q 025672 160 -------YT-ATWYQIHVSAAKAAVDSITRSLALEWG-TDYAIR 194 (249)
Q Consensus 160 -------~~-~~~~~~~y~~sK~a~~~l~~~la~e~~-~~~gi~ 194 (249)
.. +.+..-.|+.++.--..+-+.++..++ .+..|+
T Consensus 139 ~t~~~~~~~~~~p~~~v~g~t~Ld~~r~~~~la~~lgv~~~~v~ 182 (329)
T 1b8p_A 139 NAYIAMKSAPSLPAKNFTAMLRLDHNRALSQIAAKTGKPVSSIE 182 (329)
T ss_dssp HHHHHHHTCTTSCGGGEEECCHHHHHHHHHHHHHHHTCCGGGEE
T ss_pred HHHHHHHHcCCCCHHHEEEeecHHHHHHHHHHHHHhCcCHHHce
Confidence 11 233334577776666677777887765 233454
|
| >3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=98.48 E-value=5.3e-07 Score=65.68 Aligned_cols=75 Identities=8% Similarity=0.060 Sum_probs=59.7
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCc
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 90 (249)
+.++++|+|+ |.+|+.+++.|.++|++|++++++++..+.+.+ . .+.++.+|.++++.++++ .....
T Consensus 5 ~~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~----~--~~~~~~gd~~~~~~l~~~------~~~~~ 71 (141)
T 3llv_A 5 GRYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKEKIELLED----E--GFDAVIADPTDESFYRSL------DLEGV 71 (141)
T ss_dssp -CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH----T--TCEEEECCTTCHHHHHHS------CCTTC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH----C--CCcEEECCCCCHHHHHhC------CcccC
Confidence 4578999998 779999999999999999999999877665543 2 367888999999887654 22468
Q ss_pred cEEEEcCC
Q 025672 91 DILVNAAA 98 (249)
Q Consensus 91 d~vi~~ag 98 (249)
|++|.+.+
T Consensus 72 d~vi~~~~ 79 (141)
T 3llv_A 72 SAVLITGS 79 (141)
T ss_dssp SEEEECCS
T ss_pred CEEEEecC
Confidence 99998776
|
| >2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A* | Back alignment and structure |
|---|
Probab=98.46 E-value=2.3e-07 Score=77.95 Aligned_cols=80 Identities=10% Similarity=0.170 Sum_probs=60.5
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCc
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 90 (249)
.|+++||+|++|+||..++..+...|++|+++++++++++.+.+++ |... .+|.++.+++.+.+.++.. +.+
T Consensus 155 ~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~---g~~~---~~d~~~~~~~~~~~~~~~~--~~~ 226 (345)
T 2j3h_A 155 EGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKF---GFDD---AFNYKEESDLTAALKRCFP--NGI 226 (345)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTS---CCSE---EEETTSCSCSHHHHHHHCT--TCE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---CCce---EEecCCHHHHHHHHHHHhC--CCC
Confidence 5899999999999999999999999999999999987766554333 4322 2377765555555544421 479
Q ss_pred cEEEEcCC
Q 025672 91 DILVNAAA 98 (249)
Q Consensus 91 d~vi~~ag 98 (249)
|++|+|+|
T Consensus 227 d~vi~~~g 234 (345)
T 2j3h_A 227 DIYFENVG 234 (345)
T ss_dssp EEEEESSC
T ss_pred cEEEECCC
Confidence 99999998
|
| >2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A* | Back alignment and structure |
|---|
Probab=98.45 E-value=1.9e-07 Score=67.99 Aligned_cols=76 Identities=12% Similarity=0.184 Sum_probs=57.1
Q ss_pred CCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCC
Q 025672 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK 89 (249)
Q Consensus 10 l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 89 (249)
+++++++|+|+ |++|..+++.|.+.|++|++++++++..+.+ ... ...++.+|.++.+.++++ ....
T Consensus 4 ~~~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~----~~~--~~~~~~~d~~~~~~l~~~------~~~~ 70 (144)
T 2hmt_A 4 IKNKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAY----ASY--ATHAVIANATEENELLSL------GIRN 70 (144)
T ss_dssp --CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHTT----TTT--CSEEEECCTTCHHHHHTT------TGGG
T ss_pred CcCCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH----HHh--CCEEEEeCCCCHHHHHhc------CCCC
Confidence 45678999998 9999999999999999999999987654432 122 245678899987665443 1346
Q ss_pred ccEEEEcCC
Q 025672 90 LDILVNAAA 98 (249)
Q Consensus 90 id~vi~~ag 98 (249)
.|++|++++
T Consensus 71 ~d~vi~~~~ 79 (144)
T 2hmt_A 71 FEYVIVAIG 79 (144)
T ss_dssp CSEEEECCC
T ss_pred CCEEEECCC
Confidence 899999987
|
| >1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP} | Back alignment and structure |
|---|
Probab=98.43 E-value=6.3e-07 Score=74.98 Aligned_cols=80 Identities=18% Similarity=0.132 Sum_probs=59.5
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCc
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 90 (249)
.+++++|+|++||||..++..+...|++|+++++++++++.+.+ + +... .+|.++.+..+.+.+... ..++
T Consensus 145 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~-~---g~~~---~~d~~~~~~~~~i~~~~~--~~~~ 215 (333)
T 1wly_A 145 PGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARK-L---GCHH---TINYSTQDFAEVVREITG--GKGV 215 (333)
T ss_dssp TTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-H---TCSE---EEETTTSCHHHHHHHHHT--TCCE
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-c---CCCE---EEECCCHHHHHHHHHHhC--CCCC
Confidence 58999999999999999999999999999999999877665533 3 3332 247776554444433221 1369
Q ss_pred cEEEEcCCC
Q 025672 91 DILVNAAAG 99 (249)
Q Consensus 91 d~vi~~ag~ 99 (249)
|++|+|+|.
T Consensus 216 d~vi~~~g~ 224 (333)
T 1wly_A 216 DVVYDSIGK 224 (333)
T ss_dssp EEEEECSCT
T ss_pred eEEEECCcH
Confidence 999999983
|
| >1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=98.43 E-value=4.8e-07 Score=75.50 Aligned_cols=79 Identities=16% Similarity=0.102 Sum_probs=59.2
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCc
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 90 (249)
.++++||+||+||||..++..+...|++|+++++++++++.+.+ + +... .+|.++.+..+.+.+... ..++
T Consensus 140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~-~---g~~~---~~~~~~~~~~~~~~~~~~--~~~~ 210 (327)
T 1qor_A 140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALK-A---GAWQ---VINYREEDLVERLKEITG--GKKV 210 (327)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH-H---TCSE---EEETTTSCHHHHHHHHTT--TCCE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-c---CCCE---EEECCCccHHHHHHHHhC--CCCc
Confidence 58999999999999999999999999999999999877665543 3 3322 247776655554443321 1369
Q ss_pred cEEEEcCC
Q 025672 91 DILVNAAA 98 (249)
Q Consensus 91 d~vi~~ag 98 (249)
|++|+|+|
T Consensus 211 D~vi~~~g 218 (327)
T 1qor_A 211 RVVYDSVG 218 (327)
T ss_dssp EEEEECSC
T ss_pred eEEEECCc
Confidence 99999998
|
| >3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A | Back alignment and structure |
|---|
Probab=98.39 E-value=1.3e-06 Score=71.35 Aligned_cols=80 Identities=18% Similarity=0.184 Sum_probs=61.3
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
++++|+++|+|+ ||+|++++..|++.|+ +|++++|+.++.+++++++......+.+...+.. ++.+.+.
T Consensus 124 ~l~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~~---~l~~~l~------ 193 (283)
T 3jyo_A 124 NAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDAR---GIEDVIA------ 193 (283)
T ss_dssp TCCCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECST---THHHHHH------
T ss_pred CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCHH---HHHHHHh------
Confidence 578999999998 7999999999999999 7999999999999999888754333333334443 3333333
Q ss_pred CCccEEEEcCCC
Q 025672 88 GKLDILVNAAAG 99 (249)
Q Consensus 88 ~~id~vi~~ag~ 99 (249)
..|+|||+...
T Consensus 194 -~~DiVInaTp~ 204 (283)
T 3jyo_A 194 -AADGVVNATPM 204 (283)
T ss_dssp -HSSEEEECSST
T ss_pred -cCCEEEECCCC
Confidence 37999998764
|
| >2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A* | Back alignment and structure |
|---|
Probab=98.37 E-value=8.8e-07 Score=74.76 Aligned_cols=79 Identities=18% Similarity=0.208 Sum_probs=58.7
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCc
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 90 (249)
.|+++||+||+||||..++..+...|++|+++++++++++.+ +++ +.. ..+|.++.+..+.+.+... ...+
T Consensus 162 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~---g~~---~~~~~~~~~~~~~~~~~~~--~~~~ 232 (354)
T 2j8z_A 162 AGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMA-EKL---GAA---AGFNYKKEDFSEATLKFTK--GAGV 232 (354)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHH---TCS---EEEETTTSCHHHHHHHHTT--TSCE
T ss_pred CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHc---CCc---EEEecCChHHHHHHHHHhc--CCCc
Confidence 589999999999999999999999999999999998877665 334 332 2246666544444333211 1369
Q ss_pred cEEEEcCC
Q 025672 91 DILVNAAA 98 (249)
Q Consensus 91 d~vi~~ag 98 (249)
|++|+|+|
T Consensus 233 d~vi~~~G 240 (354)
T 2j8z_A 233 NLILDCIG 240 (354)
T ss_dssp EEEEESSC
T ss_pred eEEEECCC
Confidence 99999998
|
| >2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A* | Back alignment and structure |
|---|
Probab=98.37 E-value=4.8e-07 Score=76.43 Aligned_cols=77 Identities=12% Similarity=0.109 Sum_probs=56.5
Q ss_pred cEEEEecCCCchhHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCcc
Q 025672 13 KVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD 91 (249)
Q Consensus 13 k~~lItGa~~giG~~~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 91 (249)
+++||+|++||||..++..+...|+ +|+++++++++++.+.+++ +.. ..+|.++.+..+.+ .+... +.+|
T Consensus 162 ~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~---g~~---~~~d~~~~~~~~~~-~~~~~--~~~d 232 (357)
T 2zb4_A 162 KTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSEL---GFD---AAINYKKDNVAEQL-RESCP--AGVD 232 (357)
T ss_dssp CEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTS---CCS---EEEETTTSCHHHHH-HHHCT--TCEE
T ss_pred cEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHc---CCc---eEEecCchHHHHHH-HHhcC--CCCC
Confidence 8999999999999999999999999 9999999887766554433 332 23477664333333 22211 2699
Q ss_pred EEEEcCC
Q 025672 92 ILVNAAA 98 (249)
Q Consensus 92 ~vi~~ag 98 (249)
++|+|+|
T Consensus 233 ~vi~~~G 239 (357)
T 2zb4_A 233 VYFDNVG 239 (357)
T ss_dssp EEEESCC
T ss_pred EEEECCC
Confidence 9999998
|
| >4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A* | Back alignment and structure |
|---|
Probab=98.36 E-value=6.8e-07 Score=74.84 Aligned_cols=79 Identities=14% Similarity=0.218 Sum_probs=58.9
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCc
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 90 (249)
.|+++||+|++|+||..++..+...|++|+++++++++++.+.+++ +... .+|.++.+-.+.+.+.. .+.+
T Consensus 149 ~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~---g~~~---~~~~~~~~~~~~~~~~~---~~~~ 219 (336)
T 4b7c_A 149 NGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEEL---GFDG---AIDYKNEDLAAGLKREC---PKGI 219 (336)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTT---CCSE---EEETTTSCHHHHHHHHC---TTCE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---CCCE---EEECCCHHHHHHHHHhc---CCCc
Confidence 5899999999999999999999999999999999988777654443 3322 23666644333333322 2479
Q ss_pred cEEEEcCC
Q 025672 91 DILVNAAA 98 (249)
Q Consensus 91 d~vi~~ag 98 (249)
|++|+|+|
T Consensus 220 d~vi~~~g 227 (336)
T 4b7c_A 220 DVFFDNVG 227 (336)
T ss_dssp EEEEESSC
T ss_pred eEEEECCC
Confidence 99999998
|
| >1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A* | Back alignment and structure |
|---|
Probab=98.32 E-value=4.2e-06 Score=68.02 Aligned_cols=78 Identities=14% Similarity=0.195 Sum_probs=58.9
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
.++++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++.+++...+ .+.. +|+ +++. +
T Consensus 115 ~~~~~~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~~~-~~~~--~~~---~~~~-------~-- 178 (272)
T 1p77_A 115 WLRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYG-NIQA--VSM---DSIP-------L-- 178 (272)
T ss_dssp CCCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGS-CEEE--EEG---GGCC-------C--
T ss_pred CCcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHccccC-CeEE--eeH---HHhc-------c--
Confidence 3578999999998 799999999999999999999999999999888875432 2222 232 1110 1
Q ss_pred CCccEEEEcCCCCC
Q 025672 88 GKLDILVNAAAGNF 101 (249)
Q Consensus 88 ~~id~vi~~ag~~~ 101 (249)
+..|+||++++...
T Consensus 179 ~~~DivIn~t~~~~ 192 (272)
T 1p77_A 179 QTYDLVINATSAGL 192 (272)
T ss_dssp SCCSEEEECCCC--
T ss_pred CCCCEEEECCCCCC
Confidence 47999999998643
|
| >1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=98.31 E-value=2.6e-06 Score=71.83 Aligned_cols=79 Identities=15% Similarity=0.137 Sum_probs=57.6
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCc
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 90 (249)
.+++++|+|++||||..++..+...|++|+++++++++++.+ ++ .+.. ..+|.++.+..+.+.+.. ...++
T Consensus 170 ~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~---~ga~---~~~d~~~~~~~~~~~~~~--~~~~~ 240 (351)
T 1yb5_A 170 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIV-LQ---NGAH---EVFNHREVNYIDKIKKYV--GEKGI 240 (351)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HH---TTCS---EEEETTSTTHHHHHHHHH--CTTCE
T ss_pred CcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHH-HH---cCCC---EEEeCCCchHHHHHHHHc--CCCCc
Confidence 589999999999999999999999999999999998776633 22 3433 224776654444333221 11279
Q ss_pred cEEEEcCC
Q 025672 91 DILVNAAA 98 (249)
Q Consensus 91 d~vi~~ag 98 (249)
|++|+|+|
T Consensus 241 D~vi~~~G 248 (351)
T 1yb5_A 241 DIIIEMLA 248 (351)
T ss_dssp EEEEESCH
T ss_pred EEEEECCC
Confidence 99999998
|
| >3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A* | Back alignment and structure |
|---|
Probab=98.27 E-value=6.2e-06 Score=68.14 Aligned_cols=84 Identities=18% Similarity=0.199 Sum_probs=61.6
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCC-eEEEEeCC---cchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHH
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRR---KTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVEST 83 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~-~v~l~~r~---~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 83 (249)
.++++|+++|+|+ ||.|++++..|++.|+ +|+++.|+ .++.+++++++..... ..+...+..+.+.+...+.
T Consensus 144 ~~l~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~-~~v~~~~~~~l~~~~~~l~-- 219 (312)
T 3t4e_A 144 FDMRGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTD-CVVTVTDLADQHAFTEALA-- 219 (312)
T ss_dssp CCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSS-CEEEEEETTCHHHHHHHHH--
T ss_pred CCcCCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccC-cceEEechHhhhhhHhhcc--
Confidence 4578999999997 8999999999999998 79999999 7778888888864321 2223345555433333322
Q ss_pred HHHhCCccEEEEcCCCC
Q 025672 84 INHFGKLDILVNAAAGN 100 (249)
Q Consensus 84 ~~~~~~id~vi~~ag~~ 100 (249)
..|+|||+....
T Consensus 220 -----~~DiIINaTp~G 231 (312)
T 3t4e_A 220 -----SADILTNGTKVG 231 (312)
T ss_dssp -----HCSEEEECSSTT
T ss_pred -----CceEEEECCcCC
Confidence 479999987643
|
| >1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A | Back alignment and structure |
|---|
Probab=98.26 E-value=1.8e-05 Score=65.98 Aligned_cols=106 Identities=12% Similarity=0.206 Sum_probs=69.2
Q ss_pred CcEEEEecCCCchhHHHHHHHHHcC--CeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCC
Q 025672 12 GKVALLTGGGSGIGFEISLQLGKHG--AAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK 89 (249)
Q Consensus 12 ~k~~lItGa~~giG~~~a~~l~~~G--~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 89 (249)
..+++||||+|.+|..++..|+++| .+|++++++++ +....++.+......+ .. +.+..+..+++ ..
T Consensus 8 ~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~--~~~~~dL~~~~~~~~v-~~-~~~t~d~~~al-------~g 76 (326)
T 1smk_A 8 GFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNA--PGVTADISHMDTGAVV-RG-FLGQQQLEAAL-------TG 76 (326)
T ss_dssp CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSH--HHHHHHHHTSCSSCEE-EE-EESHHHHHHHH-------TT
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCc--HhHHHHhhcccccceE-EE-EeCCCCHHHHc-------CC
Confidence 3579999999999999999999998 68999998775 3333344432211111 11 23344444443 46
Q ss_pred ccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHH
Q 025672 90 LDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKY 134 (249)
Q Consensus 90 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 134 (249)
.|+||+++|...... .+. ...+.+|+.....+++.+.++
T Consensus 77 aDvVi~~ag~~~~~g---~~r---~dl~~~N~~~~~~i~~~i~~~ 115 (326)
T 1smk_A 77 MDLIIVPAGVPRKPG---MTR---DDLFKINAGIVKTLCEGIAKC 115 (326)
T ss_dssp CSEEEECCCCCCCSS---CCC---SHHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEcCCcCCCCC---CCH---HHHHHHHHHHHHHHHHHHHhh
Confidence 899999999643211 122 244788888888887777654
|
| >1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A* | Back alignment and structure |
|---|
Probab=98.24 E-value=3.6e-06 Score=70.77 Aligned_cols=80 Identities=16% Similarity=0.203 Sum_probs=57.5
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHc-CCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCC
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKH-GAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK 89 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~-G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 89 (249)
.++++||+|++|+||..++..+... |++|+++++++++++.+. ++ +... .+|.++.+..+.+.+ +... ++
T Consensus 170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~-~~---g~~~---~~~~~~~~~~~~~~~-~~~~-~~ 240 (347)
T 1jvb_A 170 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAK-RA---GADY---VINASMQDPLAEIRR-ITES-KG 240 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHH-HH---TCSE---EEETTTSCHHHHHHH-HTTT-SC
T ss_pred CCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-Hh---CCCE---EecCCCccHHHHHHH-HhcC-CC
Confidence 5899999999999999999999999 999999999987766553 33 3332 236666443333222 2111 57
Q ss_pred ccEEEEcCCC
Q 025672 90 LDILVNAAAG 99 (249)
Q Consensus 90 id~vi~~ag~ 99 (249)
+|++|+++|.
T Consensus 241 ~d~vi~~~g~ 250 (347)
T 1jvb_A 241 VDAVIDLNNS 250 (347)
T ss_dssp EEEEEESCCC
T ss_pred ceEEEECCCC
Confidence 9999999984
|
| >1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=98.23 E-value=7.1e-06 Score=60.55 Aligned_cols=78 Identities=14% Similarity=0.208 Sum_probs=59.5
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCc-chHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCC
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK-TVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK 89 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 89 (249)
.++.++|+|+ |.+|+.+++.|.+.|++|++++++. ++.+.+.+.. ...+.++..|.++++.++++ ....
T Consensus 2 ~~~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~---~~~~~~i~gd~~~~~~l~~a------~i~~ 71 (153)
T 1id1_A 2 RKDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRL---GDNADVIPGDSNDSSVLKKA------GIDR 71 (153)
T ss_dssp CCSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHH---CTTCEEEESCTTSHHHHHHH------TTTT
T ss_pred CCCcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhh---cCCCeEEEcCCCCHHHHHHc------Chhh
Confidence 3567889986 9999999999999999999999974 4444444433 23478899999998876654 1246
Q ss_pred ccEEEEcCC
Q 025672 90 LDILVNAAA 98 (249)
Q Consensus 90 id~vi~~ag 98 (249)
.|.||.+.+
T Consensus 72 ad~vi~~~~ 80 (153)
T 1id1_A 72 CRAILALSD 80 (153)
T ss_dssp CSEEEECSS
T ss_pred CCEEEEecC
Confidence 899998876
|
| >4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=98.21 E-value=5.4e-06 Score=69.89 Aligned_cols=79 Identities=22% Similarity=0.241 Sum_probs=58.5
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCc
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 90 (249)
.|+++||+||+|+||..++..+...|++|+++++++++++.+.+ + |.... +|.++.+-.+.+.+.. .+.+
T Consensus 167 ~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-l---Ga~~~---~~~~~~~~~~~~~~~~---~~g~ 236 (353)
T 4dup_A 167 EGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACER-L---GAKRG---INYRSEDFAAVIKAET---GQGV 236 (353)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-H---TCSEE---EETTTSCHHHHHHHHH---SSCE
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-c---CCCEE---EeCCchHHHHHHHHHh---CCCc
Confidence 58999999999999999999999999999999999887765543 3 33322 3555544333333322 3579
Q ss_pred cEEEEcCCC
Q 025672 91 DILVNAAAG 99 (249)
Q Consensus 91 d~vi~~ag~ 99 (249)
|++|+|+|.
T Consensus 237 Dvvid~~g~ 245 (353)
T 4dup_A 237 DIILDMIGA 245 (353)
T ss_dssp EEEEESCCG
T ss_pred eEEEECCCH
Confidence 999999983
|
| >2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A* | Back alignment and structure |
|---|
Probab=98.20 E-value=3.9e-06 Score=71.08 Aligned_cols=76 Identities=17% Similarity=0.267 Sum_probs=54.4
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCc---chHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHH
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK---TVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN 85 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~---~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 85 (249)
.++|+++||+|+ |+||..++..+...|++|++++++. ++.+.+ +++ |. ..+ | .+ ++.+.+.+ .
T Consensus 178 ~~~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~-~~~---ga--~~v--~-~~--~~~~~~~~-~- 243 (366)
T 2cdc_A 178 TLNCRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVI-EET---KT--NYY--N-SS--NGYDKLKD-S- 243 (366)
T ss_dssp SSTTCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHH-HHH---TC--EEE--E-CT--TCSHHHHH-H-
T ss_pred cCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHH-HHh---CC--cee--c-hH--HHHHHHHH-h-
Confidence 455999999999 9999999999999999999999987 655433 333 32 233 5 54 32222222 1
Q ss_pred HhCCccEEEEcCCC
Q 025672 86 HFGKLDILVNAAAG 99 (249)
Q Consensus 86 ~~~~id~vi~~ag~ 99 (249)
. +++|++|+++|.
T Consensus 244 ~-~~~d~vid~~g~ 256 (366)
T 2cdc_A 244 V-GKFDVIIDATGA 256 (366)
T ss_dssp H-CCEEEEEECCCC
T ss_pred C-CCCCEEEECCCC
Confidence 2 679999999984
|
| >1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=98.18 E-value=1.2e-05 Score=58.04 Aligned_cols=75 Identities=19% Similarity=0.376 Sum_probs=56.5
Q ss_pred CcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCcc
Q 025672 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD 91 (249)
Q Consensus 12 ~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 91 (249)
++.++|+|+ |.+|..+++.|.+.|++|++++++++..+.+.+.. .+.++..|.++.+.+... .....|
T Consensus 4 ~m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~-----~~~~~~~d~~~~~~l~~~------~~~~~d 71 (140)
T 1lss_A 4 GMYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEI-----DALVINGDCTKIKTLEDA------GIEDAD 71 (140)
T ss_dssp -CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC-----SSEEEESCTTSHHHHHHT------TTTTCS
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhc-----CcEEEEcCCCCHHHHHHc------CcccCC
Confidence 457899987 99999999999999999999999877665544321 345677899887765332 134689
Q ss_pred EEEEcCC
Q 025672 92 ILVNAAA 98 (249)
Q Consensus 92 ~vi~~ag 98 (249)
+||.+.+
T Consensus 72 ~vi~~~~ 78 (140)
T 1lss_A 72 MYIAVTG 78 (140)
T ss_dssp EEEECCS
T ss_pred EEEEeeC
Confidence 9999875
|
| >1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A* | Back alignment and structure |
|---|
Probab=98.15 E-value=1.9e-05 Score=65.40 Aligned_cols=153 Identities=10% Similarity=0.057 Sum_probs=91.2
Q ss_pred EEEEecCCCchhHHHHHHHHHcCC--eEEEEeC--CcchHHHHHHHHHhc----CCCeeEEEccCCCHHHHHHHHHHHHH
Q 025672 14 VALLTGGGSGIGFEISLQLGKHGA--AIAIMGR--RKTVLRSAVAALHSL----GIPAIGLEGDVRKREDAVRVVESTIN 85 (249)
Q Consensus 14 ~~lItGa~~giG~~~a~~l~~~G~--~v~l~~r--~~~~~~~~~~~~~~~----~~~~~~~~~Dl~~~~~~~~~~~~~~~ 85 (249)
+++||||+|++|..++..|+.+|. +++++++ ++++++....++.+. +..+.+...| +++. +
T Consensus 2 KI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~----d~l~-------~ 70 (313)
T 1hye_A 2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVES----DENL-------R 70 (313)
T ss_dssp EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEE----TTCG-------G
T ss_pred EEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHHhcCCCeEEEeCC----cchH-------H
Confidence 589999999999999999999885 5889998 665555444444321 1122222111 1111 2
Q ss_pred HhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc----
Q 025672 86 HFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT---- 161 (249)
Q Consensus 86 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~---- 161 (249)
.+...|+|||.||.... + ..+. ...++.|+.....+++.+..+- + +.|+++|......
T Consensus 71 al~gaD~Vi~~Ag~~~~-~--g~~r---~dl~~~N~~i~~~i~~~i~~~~-~-----------~~vlv~SNPv~~~t~~~ 132 (313)
T 1hye_A 71 IIDESDVVIITSGVPRK-E--GMSR---MDLAKTNAKIVGKYAKKIAEIC-D-----------TKIFVITNPVDVMTYKA 132 (313)
T ss_dssp GGTTCSEEEECCSCCCC-T--TCCH---HHHHHHHHHHHHHHHHHHHHHC-C-----------CEEEECSSSHHHHHHHH
T ss_pred HhCCCCEEEECCCCCCC-C--CCcH---HHHHHHHHHHHHHHHHHHHHhC-C-----------eEEEEecCcHHHHHHHH
Confidence 23468999999996431 1 1222 4458899999888888887653 1 4466655543321
Q ss_pred ----cCccchhhHH-HHHHHHHHHHHHHHHhc-CCCCeEE
Q 025672 162 ----ATWYQIHVSA-AKAAVDSITRSLALEWG-TDYAIRV 195 (249)
Q Consensus 162 ----~~~~~~~y~~-sK~a~~~l~~~la~e~~-~~~gi~v 195 (249)
+.+..-.++. +..-...+-+.++..++ .+..|+.
T Consensus 133 ~k~~~~p~~rviG~gt~LD~~r~~~~la~~lgv~~~~v~~ 172 (313)
T 1hye_A 133 LVDSKFERNQVFGLGTHLDSLRFKVAIAKFFGVHIDEVRT 172 (313)
T ss_dssp HHHHCCCTTSEEECTTHHHHHHHHHHHHHHHTCCGGGEEC
T ss_pred HHhhCcChhcEEEeCccHHHHHHHHHHHHHhCcCHHHeEE
Confidence 1233333554 44445566666777664 2334544
|
| >2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=98.10 E-value=1e-05 Score=67.89 Aligned_cols=79 Identities=20% Similarity=0.190 Sum_probs=57.3
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCc
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 90 (249)
.++++||+|++|+||..++..+...|++|+.+++++++++.+. ++ +... .+|.++.+-.+. +.+... ..++
T Consensus 166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~-~~---ga~~---~~d~~~~~~~~~-~~~~~~-~~~~ 236 (343)
T 2eih_A 166 PGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAK-AL---GADE---TVNYTHPDWPKE-VRRLTG-GKGA 236 (343)
T ss_dssp TTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HH---TCSE---EEETTSTTHHHH-HHHHTT-TTCE
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-hc---CCCE---EEcCCcccHHHH-HHHHhC-CCCc
Confidence 5899999999999999999999999999999999988776653 33 3332 247766532222 222211 1379
Q ss_pred cEEEEcCC
Q 025672 91 DILVNAAA 98 (249)
Q Consensus 91 d~vi~~ag 98 (249)
|++|+++|
T Consensus 237 d~vi~~~g 244 (343)
T 2eih_A 237 DKVVDHTG 244 (343)
T ss_dssp EEEEESSC
T ss_pred eEEEECCC
Confidence 99999998
|
| >4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A | Back alignment and structure |
|---|
Probab=98.10 E-value=1e-05 Score=70.35 Aligned_cols=85 Identities=16% Similarity=0.199 Sum_probs=61.1
Q ss_pred CCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEE--EccCC---------CHHHHHH
Q 025672 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGL--EGDVR---------KREDAVR 78 (249)
Q Consensus 10 l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~--~~Dl~---------~~~~~~~ 78 (249)
-.|+++||+|++|+||..++..+...|++|+++++++++++.+ ++ .|....+- ..|+. +.++++.
T Consensus 219 ~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~-~~---lGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 294 (447)
T 4a0s_A 219 KQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAV-RA---LGCDLVINRAELGITDDIADDPRRVVETGRK 294 (447)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HH---TTCCCEEEHHHHTCCTTGGGCHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-Hh---cCCCEEEecccccccccccccccccchhhhH
Confidence 4589999999999999999999999999999999888776654 22 34332221 12221 2245556
Q ss_pred HHHHHHHHhC-CccEEEEcCC
Q 025672 79 VVESTINHFG-KLDILVNAAA 98 (249)
Q Consensus 79 ~~~~~~~~~~-~id~vi~~ag 98 (249)
+.+++.+..+ .+|++|+++|
T Consensus 295 ~~~~v~~~~g~g~Dvvid~~G 315 (447)
T 4a0s_A 295 LAKLVVEKAGREPDIVFEHTG 315 (447)
T ss_dssp HHHHHHHHHSSCCSEEEECSC
T ss_pred HHHHHHHHhCCCceEEEECCC
Confidence 6666666554 6999999998
|
| >2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus} | Back alignment and structure |
|---|
Probab=98.09 E-value=5.3e-06 Score=68.28 Aligned_cols=78 Identities=21% Similarity=0.210 Sum_probs=58.0
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
++++|+++|+|+ ||+|++++..|++.|+ +|++++|+.++.+++.+++..... ..+ +.+++ .+..
T Consensus 138 ~l~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~--~~~-----~~~~~-------~~~~ 202 (297)
T 2egg_A 138 TLDGKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRS--AYF-----SLAEA-------ETRL 202 (297)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSC--CEE-----CHHHH-------HHTG
T ss_pred CCCCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccC--cee-----eHHHH-------Hhhh
Confidence 578999999998 7999999999999998 899999999888888776632111 111 22222 2233
Q ss_pred CCccEEEEcCCCCC
Q 025672 88 GKLDILVNAAAGNF 101 (249)
Q Consensus 88 ~~id~vi~~ag~~~ 101 (249)
...|+||++.+...
T Consensus 203 ~~aDivIn~t~~~~ 216 (297)
T 2egg_A 203 AEYDIIINTTSVGM 216 (297)
T ss_dssp GGCSEEEECSCTTC
T ss_pred ccCCEEEECCCCCC
Confidence 56899999998643
|
| >3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B* | Back alignment and structure |
|---|
Probab=98.07 E-value=2.2e-05 Score=63.95 Aligned_cols=76 Identities=17% Similarity=0.248 Sum_probs=59.1
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHH
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 86 (249)
.++++|+++|+|+ ||+|++++..|++.|+ +|++++|+.++.+++++++...+ .+..+..+ ++.
T Consensus 122 ~~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~-~~~~~~~~-----~l~--------- 185 (281)
T 3o8q_A 122 VLLKGATILLIGA-GGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYG-EVKAQAFE-----QLK--------- 185 (281)
T ss_dssp CCCTTCEEEEECC-SHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGS-CEEEEEGG-----GCC---------
T ss_pred CCccCCEEEEECc-hHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccC-CeeEeeHH-----Hhc---------
Confidence 4578999999998 6999999999999997 89999999999999998886543 34433221 110
Q ss_pred hCCccEEEEcCCCC
Q 025672 87 FGKLDILVNAAAGN 100 (249)
Q Consensus 87 ~~~id~vi~~ag~~ 100 (249)
...|+|||+....
T Consensus 186 -~~aDiIInaTp~g 198 (281)
T 3o8q_A 186 -QSYDVIINSTSAS 198 (281)
T ss_dssp -SCEEEEEECSCCC
T ss_pred -CCCCEEEEcCcCC
Confidence 3689999987643
|
| >1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A | Back alignment and structure |
|---|
Probab=98.05 E-value=2.1e-05 Score=66.57 Aligned_cols=78 Identities=18% Similarity=0.115 Sum_probs=58.3
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhC
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 88 (249)
.+++++++|+|+ |++|+.++..+...|++|++++|+.++++.+.+.... .+.. +..+.+++.+.+ .
T Consensus 164 ~l~~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~~---~~~~---~~~~~~~~~~~~-------~ 229 (361)
T 1pjc_A 164 GVKPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGS---RVEL---LYSNSAEIETAV-------A 229 (361)
T ss_dssp TBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGG---GSEE---EECCHHHHHHHH-------H
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhCc---eeEe---eeCCHHHHHHHH-------c
Confidence 367899999999 9999999999999999999999999888777655432 2222 223444444333 2
Q ss_pred CccEEEEcCCCC
Q 025672 89 KLDILVNAAAGN 100 (249)
Q Consensus 89 ~id~vi~~ag~~ 100 (249)
..|+||++++..
T Consensus 230 ~~DvVI~~~~~~ 241 (361)
T 1pjc_A 230 EADLLIGAVLVP 241 (361)
T ss_dssp TCSEEEECCCCT
T ss_pred CCCEEEECCCcC
Confidence 689999999863
|
| >3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A* | Back alignment and structure |
|---|
Probab=98.05 E-value=1e-05 Score=67.38 Aligned_cols=80 Identities=21% Similarity=0.160 Sum_probs=57.5
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCc
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 90 (249)
.|+++||+||+|+||..++..+...|++|+++++++++++.+. ++ |... + .|.++.+-.+.+.+.. ....+
T Consensus 140 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~---Ga~~-~--~~~~~~~~~~~~~~~~--~~~g~ 210 (325)
T 3jyn_A 140 PGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAK-AL---GAWE-T--IDYSHEDVAKRVLELT--DGKKC 210 (325)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-HH---TCSE-E--EETTTSCHHHHHHHHT--TTCCE
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc---CCCE-E--EeCCCccHHHHHHHHh--CCCCc
Confidence 5899999999999999999999999999999999888776544 33 3322 2 3555544333333221 11369
Q ss_pred cEEEEcCCC
Q 025672 91 DILVNAAAG 99 (249)
Q Consensus 91 d~vi~~ag~ 99 (249)
|++|+++|.
T Consensus 211 Dvvid~~g~ 219 (325)
T 3jyn_A 211 PVVYDGVGQ 219 (325)
T ss_dssp EEEEESSCG
T ss_pred eEEEECCCh
Confidence 999999983
|
| >3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis} | Back alignment and structure |
|---|
Probab=98.05 E-value=1.1e-05 Score=67.53 Aligned_cols=81 Identities=19% Similarity=0.148 Sum_probs=57.8
Q ss_pred CCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCC
Q 025672 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK 89 (249)
Q Consensus 10 l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 89 (249)
-.|+++||+|++++||..++..+...|++|+++++++++++.+.+ + |.... +|.++.+-.+.+.+.. ....
T Consensus 143 ~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-l---ga~~~---~~~~~~~~~~~~~~~~--~~~g 213 (340)
T 3gms_A 143 QRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLR-L---GAAYV---IDTSTAPLYETVMELT--NGIG 213 (340)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH-H---TCSEE---EETTTSCHHHHHHHHT--TTSC
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-C---CCcEE---EeCCcccHHHHHHHHh--CCCC
Confidence 358999999999999999999999999999999999888766543 3 33322 3555543333332211 1137
Q ss_pred ccEEEEcCCC
Q 025672 90 LDILVNAAAG 99 (249)
Q Consensus 90 id~vi~~ag~ 99 (249)
+|++|+|+|.
T Consensus 214 ~Dvvid~~g~ 223 (340)
T 3gms_A 214 ADAAIDSIGG 223 (340)
T ss_dssp EEEEEESSCH
T ss_pred CcEEEECCCC
Confidence 9999999983
|
| >3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A* | Back alignment and structure |
|---|
Probab=98.05 E-value=1.1e-05 Score=67.38 Aligned_cols=81 Identities=20% Similarity=0.237 Sum_probs=57.1
Q ss_pred CCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCC
Q 025672 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK 89 (249)
Q Consensus 10 l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 89 (249)
-.|+++||+||+|+||..++..+...|++|+.+++++++++.+ ++ .|.... +|.++.+-.+.+.+.. ....
T Consensus 147 ~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~---~ga~~~---~~~~~~~~~~~~~~~~--~~~g 217 (334)
T 3qwb_A 147 KKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIA-KE---YGAEYL---INASKEDILRQVLKFT--NGKG 217 (334)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HH---TTCSEE---EETTTSCHHHHHHHHT--TTSC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HH---cCCcEE---EeCCCchHHHHHHHHh--CCCC
Confidence 3589999999999999999999999999999999988776643 33 343322 3555544333332211 1136
Q ss_pred ccEEEEcCCC
Q 025672 90 LDILVNAAAG 99 (249)
Q Consensus 90 id~vi~~ag~ 99 (249)
+|++|+|+|.
T Consensus 218 ~D~vid~~g~ 227 (334)
T 3qwb_A 218 VDASFDSVGK 227 (334)
T ss_dssp EEEEEECCGG
T ss_pred ceEEEECCCh
Confidence 9999999983
|
| >3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=98.01 E-value=2e-05 Score=66.78 Aligned_cols=73 Identities=21% Similarity=0.264 Sum_probs=58.2
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCc
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 90 (249)
+.++|+|.|+ |++|+.+++.|.+ .++|.+.+++.++++++. ..+..+.+|++|.+++.++++ ..
T Consensus 15 ~~mkilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~-------~~~~~~~~d~~d~~~l~~~~~-------~~ 78 (365)
T 3abi_A 15 RHMKVLILGA-GNIGRAIAWDLKD-EFDVYIGDVNNENLEKVK-------EFATPLKVDASNFDKLVEVMK-------EF 78 (365)
T ss_dssp -CCEEEEECC-SHHHHHHHHHHTT-TSEEEEEESCHHHHHHHT-------TTSEEEECCTTCHHHHHHHHT-------TC
T ss_pred CccEEEEECC-CHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHh-------ccCCcEEEecCCHHHHHHHHh-------CC
Confidence 3446999998 9999999998875 578999999987766543 245678899999999888765 57
Q ss_pred cEEEEcCCC
Q 025672 91 DILVNAAAG 99 (249)
Q Consensus 91 d~vi~~ag~ 99 (249)
|+||++++.
T Consensus 79 DvVi~~~p~ 87 (365)
T 3abi_A 79 ELVIGALPG 87 (365)
T ss_dssp SEEEECCCG
T ss_pred CEEEEecCC
Confidence 999999873
|
| >4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=97.98 E-value=2.1e-05 Score=65.99 Aligned_cols=77 Identities=21% Similarity=0.307 Sum_probs=55.3
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh-C-
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF-G- 88 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~- 88 (249)
.|+++||+|++|+||..++..+...|++|++++++.++.+.+.+ + |... ++ |.. +++.+ ++.+.. +
T Consensus 159 ~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-~---ga~~-v~--~~~--~~~~~---~v~~~~~~~ 226 (342)
T 4eye_A 159 AGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKS-V---GADI-VL--PLE--EGWAK---AVREATGGA 226 (342)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH-H---TCSE-EE--ESS--TTHHH---HHHHHTTTS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-c---CCcE-Ee--cCc--hhHHH---HHHHHhCCC
Confidence 58999999999999999999999999999999999887765443 3 3332 22 333 23322 233322 2
Q ss_pred CccEEEEcCCC
Q 025672 89 KLDILVNAAAG 99 (249)
Q Consensus 89 ~id~vi~~ag~ 99 (249)
.+|++|+++|.
T Consensus 227 g~Dvvid~~g~ 237 (342)
T 4eye_A 227 GVDMVVDPIGG 237 (342)
T ss_dssp CEEEEEESCC-
T ss_pred CceEEEECCch
Confidence 69999999984
|
| >3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=97.97 E-value=2.1e-05 Score=63.74 Aligned_cols=75 Identities=20% Similarity=0.180 Sum_probs=57.9
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHH
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 86 (249)
.++++|+++|+|+ ||+|++++..|++.|+ +|++++|+.++.+++++++.. ..+..+ ++.+ +. +
T Consensus 116 ~~l~~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~--~~~~~~--~~~~---l~-------~- 179 (272)
T 3pwz_A 116 EPLRNRRVLLLGA-GGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDH--SRLRIS--RYEA---LE-------G- 179 (272)
T ss_dssp CCCTTSEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCC--TTEEEE--CSGG---GT-------T-
T ss_pred CCccCCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcc--CCeeEe--eHHH---hc-------c-
Confidence 4578999999998 6999999999999996 899999999999999888854 234333 2222 11 0
Q ss_pred hCCccEEEEcCCC
Q 025672 87 FGKLDILVNAAAG 99 (249)
Q Consensus 87 ~~~id~vi~~ag~ 99 (249)
...|+|||+...
T Consensus 180 -~~~DivInaTp~ 191 (272)
T 3pwz_A 180 -QSFDIVVNATSA 191 (272)
T ss_dssp -CCCSEEEECSSG
T ss_pred -cCCCEEEECCCC
Confidence 368999998764
|
| >3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A | Back alignment and structure |
|---|
Probab=97.94 E-value=4e-05 Score=66.80 Aligned_cols=85 Identities=18% Similarity=0.149 Sum_probs=63.1
Q ss_pred CCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEE--Ecc--------CCCHHHHHHH
Q 025672 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGL--EGD--------VRKREDAVRV 79 (249)
Q Consensus 10 l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~--~~D--------l~~~~~~~~~ 79 (249)
-.|.++||+|++|+||...+..+...|++|+++++++++++.+ +++ |....+- ..| ..+.++++.+
T Consensus 227 ~~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~-~~l---Ga~~vi~~~~~d~~~~~~~~~~~~~~~~~~ 302 (456)
T 3krt_A 227 KQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEIC-RAM---GAEAIIDRNAEGYRFWKDENTQDPKEWKRF 302 (456)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHH---TCCEEEETTTTTCCSEEETTEECHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHH-Hhh---CCcEEEecCcCcccccccccccchHHHHHH
Confidence 3589999999999999999999999999999999887776654 334 3322211 111 2456677777
Q ss_pred HHHHHHHhC--CccEEEEcCC
Q 025672 80 VESTINHFG--KLDILVNAAA 98 (249)
Q Consensus 80 ~~~~~~~~~--~id~vi~~ag 98 (249)
.+++.+..+ .+|++|.++|
T Consensus 303 ~~~i~~~t~g~g~Dvvid~~G 323 (456)
T 3krt_A 303 GKRIRELTGGEDIDIVFEHPG 323 (456)
T ss_dssp HHHHHHHHTSCCEEEEEECSC
T ss_pred HHHHHHHhCCCCCcEEEEcCC
Confidence 787777553 7999999998
|
| >1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A* | Back alignment and structure |
|---|
Probab=97.94 E-value=3.1e-05 Score=65.52 Aligned_cols=75 Identities=17% Similarity=0.229 Sum_probs=56.0
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCc
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 90 (249)
.|.++||+|+ |+||..++..+...|++|+++++++++.+.+.+++ |... + +|..+.+.+++ ..+.+
T Consensus 187 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~l---Ga~~-v--~~~~~~~~~~~-------~~~~~ 252 (366)
T 1yqd_A 187 PGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNF---GADS-F--LVSRDQEQMQA-------AAGTL 252 (366)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTS---CCSE-E--EETTCHHHHHH-------TTTCE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc---CCce-E--EeccCHHHHHH-------hhCCC
Confidence 6899999996 99999999999999999999999988776554333 4332 2 36666543322 23579
Q ss_pred cEEEEcCCC
Q 025672 91 DILVNAAAG 99 (249)
Q Consensus 91 d~vi~~ag~ 99 (249)
|++|.++|.
T Consensus 253 D~vid~~g~ 261 (366)
T 1yqd_A 253 DGIIDTVSA 261 (366)
T ss_dssp EEEEECCSS
T ss_pred CEEEECCCc
Confidence 999999984
|
| >2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A* | Back alignment and structure |
|---|
Probab=97.94 E-value=2.9e-05 Score=66.04 Aligned_cols=78 Identities=13% Similarity=0.137 Sum_probs=59.7
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhC
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 88 (249)
.+.+++++|+|+ |+||..+++.+...|++|++++|+.++++.+.+.+ +..+ .++..+.+++++++.
T Consensus 165 ~l~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~---g~~~---~~~~~~~~~l~~~l~------- 230 (377)
T 2vhw_A 165 GVEPADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDKLRQLDAEF---CGRI---HTRYSSAYELEGAVK------- 230 (377)
T ss_dssp TBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT---TTSS---EEEECCHHHHHHHHH-------
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhc---CCee---EeccCCHHHHHHHHc-------
Confidence 578999999998 99999999999999999999999988776655433 3332 234455666655543
Q ss_pred CccEEEEcCCCC
Q 025672 89 KLDILVNAAAGN 100 (249)
Q Consensus 89 ~id~vi~~ag~~ 100 (249)
..|+||++++..
T Consensus 231 ~aDvVi~~~~~p 242 (377)
T 2vhw_A 231 RADLVIGAVLVP 242 (377)
T ss_dssp HCSEEEECCCCT
T ss_pred CCCEEEECCCcC
Confidence 479999998853
|
| >3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=97.93 E-value=6.1e-05 Score=63.23 Aligned_cols=79 Identities=16% Similarity=0.149 Sum_probs=56.0
Q ss_pred CcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCcc
Q 025672 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD 91 (249)
Q Consensus 12 ~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 91 (249)
+++++|+||+|+||..++..+...|++|+++++++++++.+. ++ |... + .|..+.+-.+.+.+ .... ..+|
T Consensus 165 ~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~~---Ga~~-~--~~~~~~~~~~~v~~-~~~~-~g~D 235 (349)
T 3pi7_A 165 EKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLK-DI---GAAH-V--LNEKAPDFEATLRE-VMKA-EQPR 235 (349)
T ss_dssp CSEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHH-HH---TCSE-E--EETTSTTHHHHHHH-HHHH-HCCC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc---CCCE-E--EECCcHHHHHHHHH-HhcC-CCCc
Confidence 489999999999999999999999999999999988876554 33 3332 2 35555333333322 2211 2699
Q ss_pred EEEEcCCC
Q 025672 92 ILVNAAAG 99 (249)
Q Consensus 92 ~vi~~ag~ 99 (249)
++|+++|.
T Consensus 236 ~vid~~g~ 243 (349)
T 3pi7_A 236 IFLDAVTG 243 (349)
T ss_dssp EEEESSCH
T ss_pred EEEECCCC
Confidence 99999983
|
| >2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A* | Back alignment and structure |
|---|
Probab=97.92 E-value=3.9e-05 Score=64.86 Aligned_cols=78 Identities=14% Similarity=0.086 Sum_probs=55.6
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCc
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 90 (249)
.|+++||+||+|+||..++..+...|++|+.+++++++++.+.+ .|... + +|..+. ++.+.+.+.. .+.+
T Consensus 163 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~----~Ga~~-~--~~~~~~-~~~~~~~~~~--~~g~ 232 (362)
T 2c0c_A 163 EGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKS----LGCDR-P--INYKTE-PVGTVLKQEY--PEGV 232 (362)
T ss_dssp TTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----TTCSE-E--EETTTS-CHHHHHHHHC--TTCE
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH----cCCcE-E--EecCCh-hHHHHHHHhc--CCCC
Confidence 58999999999999999999999999999999998776655432 34332 2 244443 2333333221 1469
Q ss_pred cEEEEcCC
Q 025672 91 DILVNAAA 98 (249)
Q Consensus 91 d~vi~~ag 98 (249)
|++|+++|
T Consensus 233 D~vid~~g 240 (362)
T 2c0c_A 233 DVVYESVG 240 (362)
T ss_dssp EEEEECSC
T ss_pred CEEEECCC
Confidence 99999998
|
| >2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A* | Back alignment and structure |
|---|
Probab=97.90 E-value=2.3e-05 Score=57.93 Aligned_cols=77 Identities=14% Similarity=0.220 Sum_probs=57.2
Q ss_pred CCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCC
Q 025672 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK 89 (249)
Q Consensus 10 l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 89 (249)
..+++++|+|+ |.+|..+++.|.+.|++|++++|++++.+.+.+ . ....++..|.++.+.+..+ ....
T Consensus 17 ~~~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~---~--~g~~~~~~d~~~~~~l~~~------~~~~ 84 (155)
T 2g1u_A 17 QKSKYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYAFHRLNS---E--FSGFTVVGDAAEFETLKEC------GMEK 84 (155)
T ss_dssp CCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCT---T--CCSEEEESCTTSHHHHHTT------TGGG
T ss_pred cCCCcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHh---c--CCCcEEEecCCCHHHHHHc------Cccc
Confidence 45788999986 999999999999999999999999876553221 1 2345677888886554322 1236
Q ss_pred ccEEEEcCC
Q 025672 90 LDILVNAAA 98 (249)
Q Consensus 90 id~vi~~ag 98 (249)
.|+||.+.+
T Consensus 85 ad~Vi~~~~ 93 (155)
T 2g1u_A 85 ADMVFAFTN 93 (155)
T ss_dssp CSEEEECSS
T ss_pred CCEEEEEeC
Confidence 899999877
|
| >1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A | Back alignment and structure |
|---|
Probab=97.89 E-value=7.1e-05 Score=62.61 Aligned_cols=77 Identities=18% Similarity=0.198 Sum_probs=55.9
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCc
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 90 (249)
.|+++||+|+ |+||..++..+...|++|+.+++++++++.+. + .|... .+|.++.+ +.+.+.+. .+.+
T Consensus 164 ~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~---lGa~~---~~d~~~~~-~~~~~~~~---~~~~ 231 (339)
T 1rjw_A 164 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAK-E---LGADL---VVNPLKED-AAKFMKEK---VGGV 231 (339)
T ss_dssp TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHH-H---TTCSE---EECTTTSC-HHHHHHHH---HSSE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-H---CCCCE---EecCCCcc-HHHHHHHH---hCCC
Confidence 5789999999 88999999999999999999999988776543 2 34332 24766543 32222222 2679
Q ss_pred cEEEEcCCC
Q 025672 91 DILVNAAAG 99 (249)
Q Consensus 91 d~vi~~ag~ 99 (249)
|++|+++|.
T Consensus 232 d~vid~~g~ 240 (339)
T 1rjw_A 232 HAAVVTAVS 240 (339)
T ss_dssp EEEEESSCC
T ss_pred CEEEECCCC
Confidence 999999983
|
| >3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12} | Back alignment and structure |
|---|
Probab=97.89 E-value=9.9e-05 Score=53.49 Aligned_cols=77 Identities=14% Similarity=0.099 Sum_probs=59.0
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
.+++ +.++|.|+ |.+|..+++.|.+.|++|++++++++..+.+.+ ..+.++..|.++++.++++ ..
T Consensus 4 ~~~~-~~viIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~------~g~~~i~gd~~~~~~l~~a------~i 69 (140)
T 3fwz_A 4 VDIC-NHALLVGY-GRVGSLLGEKLLASDIPLVVIETSRTRVDELRE------RGVRAVLGNAANEEIMQLA------HL 69 (140)
T ss_dssp CCCC-SCEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH------TTCEEEESCTTSHHHHHHT------TG
T ss_pred ccCC-CCEEEECc-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH------cCCCEEECCCCCHHHHHhc------Cc
Confidence 3344 45678886 789999999999999999999999887665543 2466788999999876654 12
Q ss_pred CCccEEEEcCC
Q 025672 88 GKLDILVNAAA 98 (249)
Q Consensus 88 ~~id~vi~~ag 98 (249)
...|.+|.+.+
T Consensus 70 ~~ad~vi~~~~ 80 (140)
T 3fwz_A 70 ECAKWLILTIP 80 (140)
T ss_dssp GGCSEEEECCS
T ss_pred ccCCEEEEECC
Confidence 35789988776
|
| >1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A | Back alignment and structure |
|---|
Probab=97.87 E-value=9e-05 Score=61.05 Aligned_cols=100 Identities=8% Similarity=-0.031 Sum_probs=66.4
Q ss_pred EEEEecCCCchhHHHHHHHHHcCC--eEEEEeC--CcchHHHHHHHHHhc---CCCeeEEEccCCCHHHHHHHHHHHHHH
Q 025672 14 VALLTGGGSGIGFEISLQLGKHGA--AIAIMGR--RKTVLRSAVAALHSL---GIPAIGLEGDVRKREDAVRVVESTINH 86 (249)
Q Consensus 14 ~~lItGa~~giG~~~a~~l~~~G~--~v~l~~r--~~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 86 (249)
+++||||+|.+|..++..|+.+|. +++++++ ++++++....++.+. ...+.+.. + +.+ .
T Consensus 2 KI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~-~--~~~-----------a 67 (303)
T 1o6z_A 2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQ-G--GYE-----------D 67 (303)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEE-C--CGG-----------G
T ss_pred EEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEe-C--CHH-----------H
Confidence 689999999999999999999886 6999998 776665544455432 22333332 2 211 2
Q ss_pred hCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHH
Q 025672 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALK 133 (249)
Q Consensus 87 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 133 (249)
+...|+||+.+|.... + ..+. ...+..|+.....+++.+..
T Consensus 68 ~~~aDvVi~~ag~~~~-~--g~~r---~dl~~~N~~i~~~i~~~i~~ 108 (303)
T 1o6z_A 68 TAGSDVVVITAGIPRQ-P--GQTR---IDLAGDNAPIMEDIQSSLDE 108 (303)
T ss_dssp GTTCSEEEECCCCCCC-T--TCCH---HHHHHHHHHHHHHHHHHHHT
T ss_pred hCCCCEEEEcCCCCCC-C--CCCH---HHHHHHHHHHHHHHHHHHHH
Confidence 3468999999996431 1 1222 34578888877777666654
|
| >1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B* | Back alignment and structure |
|---|
Probab=97.87 E-value=7.1e-05 Score=59.89 Aligned_cols=80 Identities=18% Similarity=0.295 Sum_probs=60.5
Q ss_pred CCCcEEEEecCCCchhHHHHHHHHHcCC-eEEEEeCCc-------------------chHHHHHHHHHhcCCC--eeEEE
Q 025672 10 LKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRK-------------------TVLRSAVAALHSLGIP--AIGLE 67 (249)
Q Consensus 10 l~~k~~lItGa~~giG~~~a~~l~~~G~-~v~l~~r~~-------------------~~~~~~~~~~~~~~~~--~~~~~ 67 (249)
+++++|+|.|+ ||+|..+++.|++.|. ++++++++. .+.+.+++.+...+.. +..+.
T Consensus 29 l~~~~VlVvG~-Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~ 107 (249)
T 1jw9_B 29 LKDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVN 107 (249)
T ss_dssp HHHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEEC
T ss_pred HhCCeEEEEee-CHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEEe
Confidence 56789999996 6999999999999998 899999987 7788888888765543 45555
Q ss_pred ccCCCHHHHHHHHHHHHHHhCCccEEEEcCC
Q 025672 68 GDVRKREDAVRVVESTINHFGKLDILVNAAA 98 (249)
Q Consensus 68 ~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag 98 (249)
.++++ +.++.++ ...|+||.+..
T Consensus 108 ~~~~~-~~~~~~~-------~~~DvVi~~~d 130 (249)
T 1jw9_B 108 ALLDD-AELAALI-------AEHDLVLDCTD 130 (249)
T ss_dssp SCCCH-HHHHHHH-------HTSSEEEECCS
T ss_pred ccCCH-hHHHHHH-------hCCCEEEEeCC
Confidence 55653 3444333 35899998764
|
| >3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus} | Back alignment and structure |
|---|
Probab=97.83 E-value=8.6e-05 Score=62.28 Aligned_cols=77 Identities=13% Similarity=0.192 Sum_probs=55.1
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCc
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 90 (249)
.|+++||+||+|+||..++..+...|++|+.+++++++++.+.+ + |... + .|..+ ++.+.+.+. ..+.+
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~-l---Ga~~-v--i~~~~--~~~~~~~~~--~~~g~ 218 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKK-M---GADI-V--LNHKE--SLLNQFKTQ--GIELV 218 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHH-H---TCSE-E--ECTTS--CHHHHHHHH--TCCCE
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-c---CCcE-E--EECCc--cHHHHHHHh--CCCCc
Confidence 58999999999999999999999999999999998877665543 3 3322 2 24333 222223222 22479
Q ss_pred cEEEEcCC
Q 025672 91 DILVNAAA 98 (249)
Q Consensus 91 d~vi~~ag 98 (249)
|++|+++|
T Consensus 219 Dvv~d~~g 226 (346)
T 3fbg_A 219 DYVFCTFN 226 (346)
T ss_dssp EEEEESSC
T ss_pred cEEEECCC
Confidence 99999988
|
| >3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=97.82 E-value=1.2e-05 Score=58.78 Aligned_cols=71 Identities=15% Similarity=0.231 Sum_probs=53.8
Q ss_pred CcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCcc
Q 025672 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD 91 (249)
Q Consensus 12 ~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 91 (249)
+++++|+|+ |++|+.++..|.+.|++|++++|+.++.+++.+++. .... +..+ ++.+++ ..|
T Consensus 21 ~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~-----~~~~--~~~~---~~~~~~-------~~D 82 (144)
T 3oj0_A 21 GNKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYE-----YEYV--LIND---IDSLIK-------NND 82 (144)
T ss_dssp CCEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHT-----CEEE--ECSC---HHHHHH-------TCS
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhC-----CceE--eecC---HHHHhc-------CCC
Confidence 789999996 999999999999999999999999988888777663 1121 2233 333332 579
Q ss_pred EEEEcCCCC
Q 025672 92 ILVNAAAGN 100 (249)
Q Consensus 92 ~vi~~ag~~ 100 (249)
+||.+.+..
T Consensus 83 ivi~at~~~ 91 (144)
T 3oj0_A 83 VIITATSSK 91 (144)
T ss_dssp EEEECSCCS
T ss_pred EEEEeCCCC
Confidence 999988753
|
| >1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D | Back alignment and structure |
|---|
Probab=97.81 E-value=6.2e-05 Score=61.87 Aligned_cols=74 Identities=18% Similarity=0.280 Sum_probs=53.8
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCc
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 90 (249)
.|++++|+|++|++|..++..+...|++|+.+++++++.+.+. + .|... + .|..+.+++ .+++ +++
T Consensus 125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~---~ga~~-~--~~~~~~~~~---~~~~----~~~ 190 (302)
T 1iz0_A 125 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPL-A---LGAEE-A--ATYAEVPER---AKAW----GGL 190 (302)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHH-H---TTCSE-E--EEGGGHHHH---HHHT----TSE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-h---cCCCE-E--EECCcchhH---HHHh----cCc
Confidence 5899999999999999999999999999999999988776553 2 23322 2 354441222 2222 579
Q ss_pred cEEEEcCCC
Q 025672 91 DILVNAAAG 99 (249)
Q Consensus 91 d~vi~~ag~ 99 (249)
|++|+ +|.
T Consensus 191 d~vid-~g~ 198 (302)
T 1iz0_A 191 DLVLE-VRG 198 (302)
T ss_dssp EEEEE-CSC
T ss_pred eEEEE-CCH
Confidence 99999 873
|
| >3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=97.80 E-value=4.1e-05 Score=58.13 Aligned_cols=78 Identities=18% Similarity=0.126 Sum_probs=58.3
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHc-CCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKH-GAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~-G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
++.++.++|.| .|.+|..+++.|.+. |++|+++++++++.+.+. ..+ +.++.+|.++++.+.++ ...
T Consensus 36 ~~~~~~v~IiG-~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~----~~g--~~~~~gd~~~~~~l~~~-----~~~ 103 (183)
T 3c85_A 36 NPGHAQVLILG-MGRIGTGAYDELRARYGKISLGIEIREEAAQQHR----SEG--RNVISGDATDPDFWERI-----LDT 103 (183)
T ss_dssp CCTTCSEEEEC-CSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHH----HTT--CCEEECCTTCHHHHHTB-----CSC
T ss_pred CCCCCcEEEEC-CCHHHHHHHHHHHhccCCeEEEEECCHHHHHHHH----HCC--CCEEEcCCCCHHHHHhc-----cCC
Confidence 35577888998 589999999999999 999999999987665543 223 45677899987765432 012
Q ss_pred CCccEEEEcCC
Q 025672 88 GKLDILVNAAA 98 (249)
Q Consensus 88 ~~id~vi~~ag 98 (249)
...|.||.+.+
T Consensus 104 ~~ad~vi~~~~ 114 (183)
T 3c85_A 104 GHVKLVLLAMP 114 (183)
T ss_dssp CCCCEEEECCS
T ss_pred CCCCEEEEeCC
Confidence 46899998776
|
| >1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1 | Back alignment and structure |
|---|
Probab=97.76 E-value=1.8e-05 Score=65.12 Aligned_cols=94 Identities=20% Similarity=0.207 Sum_probs=63.8
Q ss_pred CCCCcE-EEEecCCC-----------------c-hhHHHHHHHHHcCCeEEEEeCCcchHHH---------HHHHHHh--
Q 025672 9 ILKGKV-ALLTGGGS-----------------G-IGFEISLQLGKHGAAIAIMGRRKTVLRS---------AVAALHS-- 58 (249)
Q Consensus 9 ~l~~k~-~lItGa~~-----------------g-iG~~~a~~l~~~G~~v~l~~r~~~~~~~---------~~~~~~~-- 58 (249)
+++||+ +|||+|.. | .|.++|+.++++|+.|+++.+... +.. ..+.+..
T Consensus 33 ~l~gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g~~s-l~p~~r~~~~~~~~~~~~~~~ 111 (313)
T 1p9o_A 33 GAQGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRARS-AFPYAHRFPPQTWLSALRPSG 111 (313)
T ss_dssp HHTTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEETTS-CCTTGGGSCHHHHHHHCEECC
T ss_pred hhcCCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEecCCC-cCcchhccCccchhhhhcccc
Confidence 357777 99998875 5 999999999999999999887533 111 0111110
Q ss_pred -cCCCeeEEEccCCCHHHHHHHHHHH------------------------------HHHhCCccEEEEcCCCCCCC
Q 025672 59 -LGIPAIGLEGDVRKREDAVRVVEST------------------------------INHFGKLDILVNAAAGNFLV 103 (249)
Q Consensus 59 -~~~~~~~~~~Dl~~~~~~~~~~~~~------------------------------~~~~~~id~vi~~ag~~~~~ 103 (249)
.+..+..+.+|+...+++..++.+. .+.++..|++|.+|++.-..
T Consensus 112 ~~~~~~~~i~v~v~sa~~m~~av~~~~~~~~~~~l~~i~f~tv~eyl~~L~~~~~~l~~~~~~di~i~aAAVsDf~ 187 (313)
T 1p9o_A 112 PALSGLLSLEAEENALPGFAEALRSYQEAAAAGTFLVVEFTTLADYLHLLQAAAQALNPLGPSAMFYLAAAVSDFY 187 (313)
T ss_dssp C-CCSEEEEEEETTTSTTHHHHHHHHHHHHHHTCEEEEEECBHHHHHHHHHHHHHHHGGGGGGEEEEECSBCCSEE
T ss_pred ccccccceeeeccccHHHHHHHHHHHhhhhccccceeeccccHHHHHHHHHHhhHHhhccCCCCEEEECCchhhcc
Confidence 1123456677777777776666543 24457899999999987544
|
| >3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=97.76 E-value=0.00011 Score=57.32 Aligned_cols=73 Identities=15% Similarity=0.237 Sum_probs=57.7
Q ss_pred EEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCccEE
Q 025672 14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDIL 93 (249)
Q Consensus 14 ~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~v 93 (249)
.++|+|+ |.+|+.+++.|.++|++|++++++++..+.+.+.. .+.++..|.++++.++.+ .....|++
T Consensus 2 ~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~-----~~~~i~gd~~~~~~l~~a------~i~~ad~v 69 (218)
T 3l4b_C 2 KVIIIGG-ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKL-----KATIIHGDGSHKEILRDA------EVSKNDVV 69 (218)
T ss_dssp CEEEECC-HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHS-----SSEEEESCTTSHHHHHHH------TCCTTCEE
T ss_pred EEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHc-----CCeEEEcCCCCHHHHHhc------CcccCCEE
Confidence 4789996 89999999999999999999999988776655432 356788999998876654 12467888
Q ss_pred EEcCC
Q 025672 94 VNAAA 98 (249)
Q Consensus 94 i~~ag 98 (249)
|.+.+
T Consensus 70 i~~~~ 74 (218)
T 3l4b_C 70 VILTP 74 (218)
T ss_dssp EECCS
T ss_pred EEecC
Confidence 87765
|
| >1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1 | Back alignment and structure |
|---|
Probab=97.67 E-value=0.00013 Score=62.60 Aligned_cols=73 Identities=21% Similarity=0.300 Sum_probs=55.2
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
++.|++++|.|+ |++|+.+++.|...|+ +|++++|+.++.+++.+++. .. .+ +. +++..++
T Consensus 164 ~l~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~g---~~--~~--~~---~~l~~~l------- 225 (404)
T 1gpj_A 164 SLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLG---GE--AV--RF---DELVDHL------- 225 (404)
T ss_dssp CCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHT---CE--EC--CG---GGHHHHH-------
T ss_pred cccCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcC---Cc--ee--cH---HhHHHHh-------
Confidence 468999999998 9999999999999999 89999999887777776663 21 21 22 2333333
Q ss_pred CCccEEEEcCCC
Q 025672 88 GKLDILVNAAAG 99 (249)
Q Consensus 88 ~~id~vi~~ag~ 99 (249)
...|+||.+.+.
T Consensus 226 ~~aDvVi~at~~ 237 (404)
T 1gpj_A 226 ARSDVVVSATAA 237 (404)
T ss_dssp HTCSEEEECCSS
T ss_pred cCCCEEEEccCC
Confidence 258999999763
|
| >2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A* | Back alignment and structure |
|---|
Probab=97.66 E-value=0.00018 Score=60.34 Aligned_cols=77 Identities=16% Similarity=0.184 Sum_probs=54.3
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh--
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF-- 87 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-- 87 (249)
.|+++||+|+ |+||..++..+...|+ +|+.+++++++++.+. ++ |... + .|..+.+ +. +++.+..
T Consensus 167 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~-~~---Ga~~-~--~~~~~~~-~~---~~v~~~~~g 234 (348)
T 2d8a_A 167 SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRRELAK-KV---GADY-V--INPFEED-VV---KEVMDITDG 234 (348)
T ss_dssp TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHH-HH---TCSE-E--ECTTTSC-HH---HHHHHHTTT
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-Hh---CCCE-E--ECCCCcC-HH---HHHHHHcCC
Confidence 7899999999 9999999999999999 8999999877665443 33 3321 2 3555432 22 2222222
Q ss_pred CCccEEEEcCCC
Q 025672 88 GKLDILVNAAAG 99 (249)
Q Consensus 88 ~~id~vi~~ag~ 99 (249)
..+|++|.++|.
T Consensus 235 ~g~D~vid~~g~ 246 (348)
T 2d8a_A 235 NGVDVFLEFSGA 246 (348)
T ss_dssp SCEEEEEECSCC
T ss_pred CCCCEEEECCCC
Confidence 269999999983
|
| >3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=97.66 E-value=0.00018 Score=60.17 Aligned_cols=121 Identities=10% Similarity=0.041 Sum_probs=73.0
Q ss_pred CCCcEEEEecCCCchhHHHHHHHHHcCC--eEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 10 LKGKVALLTGGGSGIGFEISLQLGKHGA--AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 10 l~~k~~lItGa~~giG~~~a~~l~~~G~--~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
++++.+.|+|++|.+|..++..++.+|. +|+++|.++++++....++.+.. +...++.-..+.... +
T Consensus 6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~----~~~~~i~~t~d~~~a-------l 74 (343)
T 3fi9_A 6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCG----FEGLNLTFTSDIKEA-------L 74 (343)
T ss_dssp SCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHC----CTTCCCEEESCHHHH-------H
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCc----CCCCceEEcCCHHHH-------h
Confidence 5678899999999999999999999995 79999999888777666665421 100111111122222 2
Q ss_pred CCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCce-EEEecccc
Q 025672 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGI-IINISATL 158 (249)
Q Consensus 88 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~-iv~iss~~ 158 (249)
..-|+||.++|... ++ ..+ -.+.++.|+.-...+. +.+.+..+ .+. |+++|...
T Consensus 75 ~dADvVvitaG~p~-kp--G~~---R~dLl~~N~~I~~~i~----~~i~~~~p-------~a~~vlvvsNPv 129 (343)
T 3fi9_A 75 TDAKYIVSSGGAPR-KE--GMT---REDLLKGNAEIAAQLG----KDIKSYCP-------DCKHVIIIFNPA 129 (343)
T ss_dssp TTEEEEEECCC----------C---HHHHHHHHHHHHHHHH----HHHHHHCT-------TCCEEEECSSSH
T ss_pred CCCCEEEEccCCCC-CC--CCC---HHHHHHHHHHHHHHHH----HHHHHhcc-------CcEEEEEecCch
Confidence 46899999998532 11 112 3445667765544444 44444332 263 66776543
|
| >3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans} | Back alignment and structure |
|---|
Probab=97.65 E-value=0.00014 Score=60.88 Aligned_cols=76 Identities=21% Similarity=0.300 Sum_probs=52.7
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCc
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 90 (249)
.|+++||+||+|+||..++..+...|++|+.+ +++++++.+ +++ |... +| .+. ++...+.+... ...+
T Consensus 150 ~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~-~~l---Ga~~----i~-~~~-~~~~~~~~~~~-~~g~ 217 (343)
T 3gaz_A 150 DGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYV-RDL---GATP----ID-ASR-EPEDYAAEHTA-GQGF 217 (343)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHH-HHH---TSEE----EE-TTS-CHHHHHHHHHT-TSCE
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHH-HHc---CCCE----ec-cCC-CHHHHHHHHhc-CCCc
Confidence 58999999999999999999999999999998 776665543 333 3332 35 333 33333322211 1369
Q ss_pred cEEEEcCC
Q 025672 91 DILVNAAA 98 (249)
Q Consensus 91 d~vi~~ag 98 (249)
|++|.++|
T Consensus 218 D~vid~~g 225 (343)
T 3gaz_A 218 DLVYDTLG 225 (343)
T ss_dssp EEEEESSC
T ss_pred eEEEECCC
Confidence 99999998
|
| >3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A* | Back alignment and structure |
|---|
Probab=97.65 E-value=0.00032 Score=57.22 Aligned_cols=89 Identities=12% Similarity=0.159 Sum_probs=65.9
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCC-eEEEEeCCc------------------chHHHHHHHHHhcCC--CeeEEE
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRK------------------TVLRSAVAALHSLGI--PAIGLE 67 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~-~v~l~~r~~------------------~~~~~~~~~~~~~~~--~~~~~~ 67 (249)
.+++++|+|.|+ ||+|..+++.|+..|. ++.++|.+. .+.+.+++.+...+. ++..+.
T Consensus 33 kL~~~~VlVvGa-GGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iNP~v~v~~~~ 111 (292)
T 3h8v_A 33 KIRTFAVAIVGV-GGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINPDVLFEVHN 111 (292)
T ss_dssp GGGGCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBC------------CCTTSBHHHHHHHHHHHHCTTSEEEEEC
T ss_pred HHhCCeEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhCCCcEEEEec
Confidence 467889999986 5999999999999997 799999876 566667777766554 455666
Q ss_pred ccCCCHHHHHHHHHHHHHH----hCCccEEEEcCC
Q 025672 68 GDVRKREDAVRVVESTINH----FGKLDILVNAAA 98 (249)
Q Consensus 68 ~Dl~~~~~~~~~~~~~~~~----~~~id~vi~~ag 98 (249)
.++++.+.++.+++.+... ....|+||.+.-
T Consensus 112 ~~l~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~D 146 (292)
T 3h8v_A 112 YNITTVENFQHFMDRISNGGLEEGKPVDLVLSCVD 146 (292)
T ss_dssp CCTTSHHHHHHHHHHHHHBSSSTTBCCSEEEECCS
T ss_pred ccCCcHHHHHHHhhhhcccccccCCCCCEEEECCc
Confidence 7787777777776544321 136899987653
|
| >3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A* | Back alignment and structure |
|---|
Probab=97.63 E-value=0.00045 Score=55.72 Aligned_cols=66 Identities=20% Similarity=0.293 Sum_probs=51.9
Q ss_pred CcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCcc
Q 025672 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD 91 (249)
Q Consensus 12 ~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 91 (249)
+|+++|+|+ ||.|++++..|.+.|.+|+++.|+.++.++++ ++. +... +..+. ...|
T Consensus 118 ~k~vlvlGa-GGaaraia~~L~~~G~~v~V~nRt~~ka~~la-~~~-----~~~~--~~~~l--------------~~~D 174 (269)
T 3phh_A 118 YQNALILGA-GGSAKALACELKKQGLQVSVLNRSSRGLDFFQ-RLG-----CDCF--MEPPK--------------SAFD 174 (269)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTTHHHHH-HHT-----CEEE--SSCCS--------------SCCS
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HCC-----CeEe--cHHHh--------------ccCC
Confidence 899999997 89999999999999999999999999998888 653 2222 22221 1589
Q ss_pred EEEEcCCCC
Q 025672 92 ILVNAAAGN 100 (249)
Q Consensus 92 ~vi~~ag~~ 100 (249)
+|||+....
T Consensus 175 iVInaTp~G 183 (269)
T 3phh_A 175 LIINATSAS 183 (269)
T ss_dssp EEEECCTTC
T ss_pred EEEEcccCC
Confidence 999987643
|
| >2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A* | Back alignment and structure |
|---|
Probab=97.61 E-value=0.0001 Score=61.67 Aligned_cols=77 Identities=21% Similarity=0.240 Sum_probs=53.8
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCC
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK 89 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 89 (249)
.|.++||+|+ |++|..++..+...|+ +|+.+++++++++.+.+ + .. .+ .|..+. ++.+.+.++. ...
T Consensus 164 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~-l----a~-~v--~~~~~~-~~~~~~~~~~--~~g 231 (343)
T 2dq4_A 164 SGKSVLITGA-GPIGLMAAMVVRASGAGPILVSDPNPYRLAFARP-Y----AD-RL--VNPLEE-DLLEVVRRVT--GSG 231 (343)
T ss_dssp TTSCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTT-T----CS-EE--ECTTTS-CHHHHHHHHH--SSC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH-h----HH-hc--cCcCcc-CHHHHHHHhc--CCC
Confidence 7899999999 9999999998888999 89999998776543322 1 11 12 355543 3333333332 247
Q ss_pred ccEEEEcCCC
Q 025672 90 LDILVNAAAG 99 (249)
Q Consensus 90 id~vi~~ag~ 99 (249)
+|++|.++|.
T Consensus 232 ~D~vid~~g~ 241 (343)
T 2dq4_A 232 VEVLLEFSGN 241 (343)
T ss_dssp EEEEEECSCC
T ss_pred CCEEEECCCC
Confidence 9999999983
|
| >2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.56 E-value=0.00031 Score=59.54 Aligned_cols=77 Identities=16% Similarity=0.205 Sum_probs=53.1
Q ss_pred CCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCC
Q 025672 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK 89 (249)
Q Consensus 10 l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 89 (249)
-.|+++||+||+|+||..++..+...|++|+.++ +.++.+.+ ++ .|... + +|..+.+-.+ ++.+ .++
T Consensus 182 ~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~-~~~~~~~~-~~---lGa~~-v--~~~~~~~~~~----~~~~-~~g 248 (375)
T 2vn8_A 182 CTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVC-SQDASELV-RK---LGADD-V--IDYKSGSVEE----QLKS-LKP 248 (375)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHH-HH---TTCSE-E--EETTSSCHHH----HHHT-SCC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEe-ChHHHHHH-HH---cCCCE-E--EECCchHHHH----HHhh-cCC
Confidence 3589999999999999999998889999999888 44554433 33 34432 2 2555433222 2222 257
Q ss_pred ccEEEEcCCC
Q 025672 90 LDILVNAAAG 99 (249)
Q Consensus 90 id~vi~~ag~ 99 (249)
+|++|.++|.
T Consensus 249 ~D~vid~~g~ 258 (375)
T 2vn8_A 249 FDFILDNVGG 258 (375)
T ss_dssp BSEEEESSCT
T ss_pred CCEEEECCCC
Confidence 9999999984
|
| >1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A* | Back alignment and structure |
|---|
Probab=97.55 E-value=0.00068 Score=56.06 Aligned_cols=115 Identities=16% Similarity=0.168 Sum_probs=70.9
Q ss_pred EEEEecCCCchhHHHHHHHHHcC--CeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCC---HHHHHHHHHHHHHHhC
Q 025672 14 VALLTGGGSGIGFEISLQLGKHG--AAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK---REDAVRVVESTINHFG 88 (249)
Q Consensus 14 ~~lItGa~~giG~~~a~~l~~~G--~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~---~~~~~~~~~~~~~~~~ 88 (249)
++.|+|++|.+|..++..|+..| .+|+++|+++ .+....++.+..... ++.. ..+.+.++ .
T Consensus 2 KI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~--~~~~a~dL~~~~~~~-----~l~~~~~t~d~~~a~-------~ 67 (314)
T 1mld_A 2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH--TPGVAADLSHIETRA-----TVKGYLGPEQLPDCL-------K 67 (314)
T ss_dssp EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS--HHHHHHHHTTSSSSC-----EEEEEESGGGHHHHH-------T
T ss_pred EEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc--cHHHHHHHhccCcCc-----eEEEecCCCCHHHHh-------C
Confidence 58999999999999999999988 5899999987 344444554322111 1111 12333333 4
Q ss_pred CccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccc
Q 025672 89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH 159 (249)
Q Consensus 89 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~ 159 (249)
..|+||+.+|..... ..+. ...+..|+.....+.+.+.++ .+ .+.|+++|....
T Consensus 68 ~aDvVvi~ag~~~~~---g~~r---~dl~~~n~~i~~~i~~~i~~~----~p-------~a~viv~sNPv~ 121 (314)
T 1mld_A 68 GCDVVVIPAGVPRKP---GMTR---DDLFNTNATIVATLTAACAQH----CP-------DAMICIISNPVN 121 (314)
T ss_dssp TCSEEEECCSCCCCT---TCCG---GGGHHHHHHHHHHHHHHHHHH----CT-------TSEEEECSSCHH
T ss_pred CCCEEEECCCcCCCC---CCcH---HHHHHHHHHHHHHHHHHHHhh----CC-------CeEEEEECCCcc
Confidence 689999999864321 1222 233566766655555555443 22 377888766543
|
| >3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa} | Back alignment and structure |
|---|
Probab=97.54 E-value=0.00054 Score=57.72 Aligned_cols=83 Identities=14% Similarity=0.146 Sum_probs=59.2
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCCe-EEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCC
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGAA-IAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK 89 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~~-v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 89 (249)
.|.++||+|+ |++|...+..+...|++ |+.+++++++++.+.+ + ...+..+..|-.+.+++.+.+.+... -..
T Consensus 179 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~-l---~~~~~~~~~~~~~~~~~~~~v~~~t~-g~g 252 (363)
T 3m6i_A 179 LGDPVLICGA-GPIGLITMLCAKAAGACPLVITDIDEGRLKFAKE-I---CPEVVTHKVERLSAEESAKKIVESFG-GIE 252 (363)
T ss_dssp TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHH-H---CTTCEEEECCSCCHHHHHHHHHHHTS-SCC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH-h---chhcccccccccchHHHHHHHHHHhC-CCC
Confidence 5889999998 99999999888889997 9999998887765543 3 23455555565555655544433211 136
Q ss_pred ccEEEEcCCC
Q 025672 90 LDILVNAAAG 99 (249)
Q Consensus 90 id~vi~~ag~ 99 (249)
+|++|.+.|.
T Consensus 253 ~Dvvid~~g~ 262 (363)
T 3m6i_A 253 PAVALECTGV 262 (363)
T ss_dssp CSEEEECSCC
T ss_pred CCEEEECCCC
Confidence 9999999983
|
| >5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A* | Back alignment and structure |
|---|
Probab=97.54 E-value=0.00012 Score=61.08 Aligned_cols=120 Identities=14% Similarity=0.204 Sum_probs=73.5
Q ss_pred CcEEEEecCCCchhHHHHHHHHHcCC--e-----EEEEeCCc--chHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHH
Q 025672 12 GKVALLTGGGSGIGFEISLQLGKHGA--A-----IAIMGRRK--TVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVES 82 (249)
Q Consensus 12 ~k~~lItGa~~giG~~~a~~l~~~G~--~-----v~l~~r~~--~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~ 82 (249)
..+++||||+|.||..++..|+..|. + ++++|.++ +.++....++.+...... - ++....+.
T Consensus 3 ~~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~~~~-~--~~~~~~~~------ 73 (333)
T 5mdh_A 3 PIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLL-K--DVIATDKE------ 73 (333)
T ss_dssp CEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTE-E--EEEEESCH------
T ss_pred CeEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHhhhhccc-C--CEEEcCCc------
Confidence 36799999999999999999998886 5 99999875 356666666655321111 1 11111111
Q ss_pred HHHHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCc-eEEEecccc
Q 025672 83 TINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGG-IIINISATL 158 (249)
Q Consensus 83 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g-~iv~iss~~ 158 (249)
.+.+...|+||+.||... ++ ..+ -.+.++.|+.....+.+.+.++ .. .+ .|+++|...
T Consensus 74 -~~~~~daDvVvitAg~pr-kp--G~t---R~dll~~N~~i~~~i~~~i~~~----~~-------~~~~vivvsNPv 132 (333)
T 5mdh_A 74 -EIAFKDLDVAILVGSMPR-RD--GME---RKDLLKANVKIFKCQGAALDKY----AK-------KSVKVIVVGNPA 132 (333)
T ss_dssp -HHHTTTCSEEEECCSCCC-CT--TCC---TTTTHHHHHHHHHHHHHHHHHH----SC-------TTCEEEECSSSH
T ss_pred -HHHhCCCCEEEEeCCCCC-CC--CCC---HHHHHHHHHHHHHHHHHHHHHh----CC-------CCeEEEEcCCch
Confidence 222346899999998542 11 112 2445677877666555555433 22 24 477777643
|
| >1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A | Back alignment and structure |
|---|
Probab=97.51 E-value=0.00059 Score=54.58 Aligned_cols=80 Identities=18% Similarity=0.268 Sum_probs=56.3
Q ss_pred CCCcEEEEecCCCchhHHHHHHHHHcCC-eEEEEeCCc-------------------chHHHHHHHHHhcCCC--eeEEE
Q 025672 10 LKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRK-------------------TVLRSAVAALHSLGIP--AIGLE 67 (249)
Q Consensus 10 l~~k~~lItGa~~giG~~~a~~l~~~G~-~v~l~~r~~-------------------~~~~~~~~~~~~~~~~--~~~~~ 67 (249)
+++++|+|.|+ ||+|.++++.|+..|. ++.++|++. .+.+.+++.+...+.. +..+.
T Consensus 26 l~~~~VlvvG~-GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~ 104 (251)
T 1zud_1 26 LLDSQVLIIGL-GGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTALQ 104 (251)
T ss_dssp HHTCEEEEECC-STTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEEC
T ss_pred HhcCcEEEEcc-CHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEEEEEe
Confidence 56789999997 6899999999999998 688887653 5667777777665544 44444
Q ss_pred ccCCCHHHHHHHHHHHHHHhCCccEEEEcCC
Q 025672 68 GDVRKREDAVRVVESTINHFGKLDILVNAAA 98 (249)
Q Consensus 68 ~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag 98 (249)
.+++. +.+..+++ ..|+||.+..
T Consensus 105 ~~~~~-~~~~~~~~-------~~DvVi~~~d 127 (251)
T 1zud_1 105 QRLTG-EALKDAVA-------RADVVLDCTD 127 (251)
T ss_dssp SCCCH-HHHHHHHH-------HCSEEEECCS
T ss_pred ccCCH-HHHHHHHh-------cCCEEEECCC
Confidence 44443 44444443 3688888654
|
| >3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A* | Back alignment and structure |
|---|
Probab=97.50 E-value=2.6e-05 Score=63.36 Aligned_cols=71 Identities=15% Similarity=0.192 Sum_probs=51.0
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
++++|+++|+|+ ||+|++++..|.+.|+ +|++++|+.++.+++.+ .+..+ ..+++..+ .
T Consensus 114 ~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~-------~~~~~-----~~~~~~~~-------~ 173 (277)
T 3don_A 114 GIEDAYILILGA-GGASKGIANELYKIVRPTLTVANRTMSRFNNWSL-------NINKI-----NLSHAESH-------L 173 (277)
T ss_dssp TGGGCCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCCS-------CCEEE-----CHHHHHHT-------G
T ss_pred CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHH-------hcccc-----cHhhHHHH-------h
Confidence 578999999997 7999999999999999 89999999887655432 11111 22333222 2
Q ss_pred CCccEEEEcCCC
Q 025672 88 GKLDILVNAAAG 99 (249)
Q Consensus 88 ~~id~vi~~ag~ 99 (249)
...|+|||+...
T Consensus 174 ~~aDiVInaTp~ 185 (277)
T 3don_A 174 DEFDIIINTTPA 185 (277)
T ss_dssp GGCSEEEECCC-
T ss_pred cCCCEEEECccC
Confidence 457999998764
|
| >3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A* | Back alignment and structure |
|---|
Probab=97.50 E-value=0.0013 Score=54.63 Aligned_cols=119 Identities=13% Similarity=0.130 Sum_probs=69.9
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCC--eEEEEeCCcchHHHHHHHHHhcC---CCeeEEEccCCCHHHHHHHHHH
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGA--AIAIMGRRKTVLRSAVAALHSLG---IPAIGLEGDVRKREDAVRVVES 82 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~--~v~l~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dl~~~~~~~~~~~~ 82 (249)
++.+++.+.|+|+ |.+|..++..|+..|. +|+++|+++++++....++.+.. ..+.+.. | +
T Consensus 5 ~~~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~-~--~---------- 70 (326)
T 3vku_A 5 TDKDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYS-A--E---------- 70 (326)
T ss_dssp --CCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEE-C--C----------
T ss_pred ccCCCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEE-C--c----------
Confidence 4456788999996 9999999999999987 89999999888887777775432 1222221 1 1
Q ss_pred HHHHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccc
Q 025672 83 TINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL 158 (249)
Q Consensus 83 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~ 158 (249)
.+.+..-|+||..+|... ++ .++-.+.++.|+-- ++.+.+.+.+..+ .+.++++|...
T Consensus 71 -~~a~~~aDiVvi~ag~~~-kp-----G~tR~dL~~~N~~I----~~~i~~~i~~~~p-------~a~ilvvtNPv 128 (326)
T 3vku_A 71 -YSDAKDADLVVITAGAPQ-KP-----GETRLDLVNKNLKI----LKSIVDPIVDSGF-------NGIFLVAANPV 128 (326)
T ss_dssp -GGGGTTCSEEEECCCCC----------------------C----HHHHHHHHHTTTC-------CSEEEECSSSH
T ss_pred -HHHhcCCCEEEECCCCCC-CC-----CchHHHHHHHHHHH----HHHHHHHHHhcCC-------ceEEEEccCch
Confidence 123456899999998532 11 11223445666543 4444555544432 37777777654
|
| >1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A* | Back alignment and structure |
|---|
Probab=97.49 E-value=0.00015 Score=56.22 Aligned_cols=43 Identities=26% Similarity=0.397 Sum_probs=37.7
Q ss_pred EEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHH
Q 025672 14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAAL 56 (249)
Q Consensus 14 ~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~ 56 (249)
+++|+||+|.+|..+++.|++.|++|++++|+.++.+.+.+++
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~ 44 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEY 44 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHH
T ss_pred eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh
Confidence 5789999999999999999999999999999988777665543
|
| >1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A | Back alignment and structure |
|---|
Probab=97.47 E-value=0.00042 Score=58.35 Aligned_cols=85 Identities=19% Similarity=0.169 Sum_probs=52.6
Q ss_pred CC-cEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCH--HHHHHHHHHHHH-H
Q 025672 11 KG-KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKR--EDAVRVVESTIN-H 86 (249)
Q Consensus 11 ~~-k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~--~~~~~~~~~~~~-~ 86 (249)
.| .++||+|++|++|...+..+...|++|+.+.++.+++++..+.+.+.|... ++ |..+. +++.+.+.++.. .
T Consensus 166 ~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~-vi--~~~~~~~~~~~~~i~~~t~~~ 242 (364)
T 1gu7_A 166 PGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQ-VI--TEDQNNSREFGPTIKEWIKQS 242 (364)
T ss_dssp TTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCSE-EE--EHHHHHCGGGHHHHHHHHHHH
T ss_pred CCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccccHHHHHHHHhcCCeE-EE--ecCccchHHHHHHHHHHhhcc
Confidence 47 899999999999999988888899999988877665322222333334432 22 22210 122222222210 1
Q ss_pred hCCccEEEEcCC
Q 025672 87 FGKLDILVNAAA 98 (249)
Q Consensus 87 ~~~id~vi~~ag 98 (249)
.+.+|++|.+.|
T Consensus 243 ~~g~Dvvid~~G 254 (364)
T 1gu7_A 243 GGEAKLALNCVG 254 (364)
T ss_dssp TCCEEEEEESSC
T ss_pred CCCceEEEECCC
Confidence 247999999998
|
| >3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A* | Back alignment and structure |
|---|
Probab=97.46 E-value=0.002 Score=53.43 Aligned_cols=117 Identities=16% Similarity=0.164 Sum_probs=74.7
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCC--eEEEEeCCcchHHHHHHHHHhcC----CCeeEEEccCCCHHHHHHHHHHHH
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGA--AIAIMGRRKTVLRSAVAALHSLG----IPAIGLEGDVRKREDAVRVVESTI 84 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~--~v~l~~r~~~~~~~~~~~~~~~~----~~~~~~~~Dl~~~~~~~~~~~~~~ 84 (249)
+.+.+.|+|+ |.+|..++..|+..|. +|+++|+++++++....++.+.. ..+.+...| .
T Consensus 4 ~~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~--------------~ 68 (326)
T 3pqe_A 4 HVNKVALIGA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGT--------------Y 68 (326)
T ss_dssp SCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEEC--------------G
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCc--------------H
Confidence 3567899996 9999999999999997 89999999888887766665431 123332222 1
Q ss_pred HHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccc
Q 025672 85 NHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH 159 (249)
Q Consensus 85 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~ 159 (249)
+.+..-|+||.++|... ++ ..+. .+.++.|+.-. +.+.+.+.+..+ .+.++++|....
T Consensus 69 ~a~~~aDvVvi~ag~p~-kp--G~~R---~dL~~~N~~Iv----~~i~~~I~~~~p-------~a~vlvvtNPvd 126 (326)
T 3pqe_A 69 EDCKDADIVCICAGANQ-KP--GETR---LELVEKNLKIF----KGIVSEVMASGF-------DGIFLVATNPVD 126 (326)
T ss_dssp GGGTTCSEEEECCSCCC-CT--TCCH---HHHHHHHHHHH----HHHHHHHHHTTC-------CSEEEECSSSHH
T ss_pred HHhCCCCEEEEecccCC-CC--CccH---HHHHHHHHHHH----HHHHHHHHHhcC-------CeEEEEcCChHH
Confidence 22346899999998532 21 1222 34466666544 444444444332 367788776543
|
| >1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A* | Back alignment and structure |
|---|
Probab=97.42 E-value=0.001 Score=56.95 Aligned_cols=42 Identities=14% Similarity=0.170 Sum_probs=38.2
Q ss_pred CCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHH
Q 025672 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSA 52 (249)
Q Consensus 10 l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~ 52 (249)
+.+++++|+|+ |.+|..+++.+...|++|++++++.++++.+
T Consensus 170 l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~ 211 (401)
T 1x13_A 170 VPPAKVMVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQV 211 (401)
T ss_dssp ECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCGGGHHHH
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH
Confidence 67899999996 8999999999999999999999998877765
|
| >1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=97.41 E-value=0.00029 Score=58.46 Aligned_cols=75 Identities=16% Similarity=0.139 Sum_probs=50.3
Q ss_pred EEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCccEE
Q 025672 14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDIL 93 (249)
Q Consensus 14 ~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~v 93 (249)
++||+|++|++|..++..+...|++|+.+++++++++.+. + .|... + +|..+.+ ...+.++ ..+.+|++
T Consensus 152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~-~---lGa~~-~--i~~~~~~--~~~~~~~--~~~~~d~v 220 (328)
T 1xa0_A 152 PVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLR-V---LGAKE-V--LAREDVM--AERIRPL--DKQRWAAA 220 (328)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHH-H---TTCSE-E--EECC-----------C--CSCCEEEE
T ss_pred eEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-H---cCCcE-E--EecCCcH--HHHHHHh--cCCcccEE
Confidence 7999999999999999998899999999999887776553 2 34332 2 2544432 1222222 11469999
Q ss_pred EEcCCC
Q 025672 94 VNAAAG 99 (249)
Q Consensus 94 i~~ag~ 99 (249)
|.++|.
T Consensus 221 id~~g~ 226 (328)
T 1xa0_A 221 VDPVGG 226 (328)
T ss_dssp EECSTT
T ss_pred EECCcH
Confidence 999983
|
| >3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021} | Back alignment and structure |
|---|
Probab=97.40 E-value=0.00052 Score=57.86 Aligned_cols=78 Identities=23% Similarity=0.236 Sum_probs=54.6
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCc
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 90 (249)
.|.++||+| +|++|...+..+...|++|+++++++++++.+ +++ |... + .| .+.+++.+.+.+... ...+
T Consensus 189 ~g~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~-~~l---Ga~~-v--i~-~~~~~~~~~v~~~~~-g~g~ 258 (363)
T 3uog_A 189 AGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSSSREKLDRA-FAL---GADH-G--IN-RLEEDWVERVYALTG-DRGA 258 (363)
T ss_dssp TTCEEEEES-SBHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHH---TCSE-E--EE-TTTSCHHHHHHHHHT-TCCE
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEecCchhHHHH-HHc---CCCE-E--Ec-CCcccHHHHHHHHhC-CCCc
Confidence 589999999 89999999998889999999999988776653 333 4332 2 24 443333333333221 1269
Q ss_pred cEEEEcCC
Q 025672 91 DILVNAAA 98 (249)
Q Consensus 91 d~vi~~ag 98 (249)
|++|.++|
T Consensus 259 D~vid~~g 266 (363)
T 3uog_A 259 DHILEIAG 266 (363)
T ss_dssp EEEEEETT
T ss_pred eEEEECCC
Confidence 99999998
|
| >3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A* | Back alignment and structure |
|---|
Probab=97.40 E-value=0.0009 Score=55.79 Aligned_cols=76 Identities=18% Similarity=0.228 Sum_probs=54.6
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCc
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 90 (249)
.|.++||+|+ |++|...+..+...|++|+.+++++++++.+. +.|.... .|..+.+-.+.+. +..+.+
T Consensus 166 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~----~lGa~~~---i~~~~~~~~~~~~----~~~g~~ 233 (340)
T 3s2e_A 166 PGQWVVISGI-GGLGHVAVQYARAMGLRVAAVDIDDAKLNLAR----RLGAEVA---VNARDTDPAAWLQ----KEIGGA 233 (340)
T ss_dssp TTSEEEEECC-STTHHHHHHHHHHTTCEEEEEESCHHHHHHHH----HTTCSEE---EETTTSCHHHHHH----HHHSSE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH----HcCCCEE---EeCCCcCHHHHHH----HhCCCC
Confidence 5899999997 89999999988889999999999887766432 2344322 3555543333332 234689
Q ss_pred cEEEEcCC
Q 025672 91 DILVNAAA 98 (249)
Q Consensus 91 d~vi~~ag 98 (249)
|++|.++|
T Consensus 234 d~vid~~g 241 (340)
T 3s2e_A 234 HGVLVTAV 241 (340)
T ss_dssp EEEEESSC
T ss_pred CEEEEeCC
Confidence 99999987
|
| >4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ... | Back alignment and structure |
|---|
Probab=97.35 E-value=0.0026 Score=52.89 Aligned_cols=120 Identities=8% Similarity=0.058 Sum_probs=76.9
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCC--eEEEEeCCcchHHHHHHHHHhcC---CCeeEEEccCCCHHHHHHHHHHH
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGA--AIAIMGRRKTVLRSAVAALHSLG---IPAIGLEGDVRKREDAVRVVEST 83 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~--~v~l~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dl~~~~~~~~~~~~~ 83 (249)
..+.+.+.|+|+ |.+|..++..|+.+|. +|+++|+++++++....++.+.. .....+.. .|.
T Consensus 16 ~~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~--~d~---------- 82 (331)
T 4aj2_A 16 QVPQNKITVVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSS--KDY---------- 82 (331)
T ss_dssp -CCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEEC--SSG----------
T ss_pred cCCCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEc--CCH----------
Confidence 456788999997 8999999999999997 79999999888888777776431 11122222 121
Q ss_pred HHHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccc
Q 025672 84 INHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH 159 (249)
Q Consensus 84 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~ 159 (249)
+.+..-|++|.++|... ++ ..+. .+.++.|+--...+.+.+.+ ..+ .+.++++|....
T Consensus 83 -~~~~~aDiVvi~aG~~~-kp--G~tR---~dL~~~N~~I~~~i~~~i~~----~~p-------~a~vlvvtNPvd 140 (331)
T 4aj2_A 83 -SVTANSKLVIITAGARQ-QE--GESR---LNLVQRNVNIFKFIIPNVVK----YSP-------QCKLLIVSNPVD 140 (331)
T ss_dssp -GGGTTEEEEEECCSCCC-CT--TCCG---GGGHHHHHHHHHHHHHHHHH----HCT-------TCEEEECSSSHH
T ss_pred -HHhCCCCEEEEccCCCC-CC--CccH---HHHHHHHHHHHHHHHHHHHH----HCC-------CeEEEEecChHH
Confidence 12346899999998643 21 2233 34566666544444444443 322 367888876543
|
| >2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A | Back alignment and structure |
|---|
Probab=97.33 E-value=0.00034 Score=55.13 Aligned_cols=72 Identities=11% Similarity=0.062 Sum_probs=55.0
Q ss_pred CcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCcc
Q 025672 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD 91 (249)
Q Consensus 12 ~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 91 (249)
.+.++|.|+ |.+|+.+++.|.+.|+ |++++++++..+.+. ..+.++.+|.++++.++++ .....|
T Consensus 9 ~~~viI~G~-G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~-------~~~~~i~gd~~~~~~l~~a------~i~~ad 73 (234)
T 2aef_A 9 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKKVLR-------SGANFVHGDPTRVSDLEKA------NVRGAR 73 (234)
T ss_dssp -CEEEEESC-CHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH-------TTCEEEESCTTCHHHHHHT------TCTTCS
T ss_pred CCEEEEECC-ChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh-------cCCeEEEcCCCCHHHHHhc------Ccchhc
Confidence 467888887 8999999999999999 999999987665443 2377888999998876554 123578
Q ss_pred EEEEcCC
Q 025672 92 ILVNAAA 98 (249)
Q Consensus 92 ~vi~~ag 98 (249)
.+|.+.+
T Consensus 74 ~vi~~~~ 80 (234)
T 2aef_A 74 AVIVDLE 80 (234)
T ss_dssp EEEECCS
T ss_pred EEEEcCC
Confidence 8887654
|
| >1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=97.32 E-value=0.00092 Score=56.54 Aligned_cols=79 Identities=16% Similarity=0.228 Sum_probs=55.0
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCC-HHHHHHHHHHHHHHhC
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK-REDAVRVVESTINHFG 88 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~ 88 (249)
.|.++||+|+ |++|..++..+...|+ +|+.+++++++++.+. + .|... + +|.++ .+++.+.+.++.. +
T Consensus 192 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~-~---lGa~~-v--i~~~~~~~~~~~~~~~~~~--~ 261 (374)
T 1cdo_A 192 PGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAK-V---FGATD-F--VNPNDHSEPISQVLSKMTN--G 261 (374)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-H---TTCCE-E--ECGGGCSSCHHHHHHHHHT--S
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH-H---hCCce-E--EeccccchhHHHHHHHHhC--C
Confidence 5889999995 8999999998888999 7999999988776543 3 34322 2 24443 1234444433322 4
Q ss_pred CccEEEEcCCC
Q 025672 89 KLDILVNAAAG 99 (249)
Q Consensus 89 ~id~vi~~ag~ 99 (249)
.+|++|.++|.
T Consensus 262 g~D~vid~~g~ 272 (374)
T 1cdo_A 262 GVDFSLECVGN 272 (374)
T ss_dssp CBSEEEECSCC
T ss_pred CCCEEEECCCC
Confidence 79999999983
|
| >3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=97.31 E-value=0.0031 Score=52.11 Aligned_cols=118 Identities=14% Similarity=0.150 Sum_probs=73.2
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCC-eEEEEeCC--cchHHHHHHHHHhc------CCCeeEEEccCCCHHHHHH
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRR--KTVLRSAVAALHSL------GIPAIGLEGDVRKREDAVR 78 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~-~v~l~~r~--~~~~~~~~~~~~~~------~~~~~~~~~Dl~~~~~~~~ 78 (249)
|+++.+.+.|+|+ |.+|..++..|+..|. +|++++++ ++..+....++.+. ..++.. . ++.
T Consensus 4 m~~~~~kv~ViGa-G~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~--t--~d~----- 73 (315)
T 3tl2_A 4 MTIKRKKVSVIGA-GFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIG--T--SDY----- 73 (315)
T ss_dssp CCCCCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEE--E--SCG-----
T ss_pred cccCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEE--c--CCH-----
Confidence 5566788999997 9999999999999999 99999998 55555444444321 122221 1 111
Q ss_pred HHHHHHHHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccc
Q 025672 79 VVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL 158 (249)
Q Consensus 79 ~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~ 158 (249)
+.+..-|+||.++|... ++ ..+. .+.++.|+.-...+.+.+. +..+ .+.++++|...
T Consensus 74 ------~a~~~aDvVIiaag~p~-kp--g~~R---~dl~~~N~~i~~~i~~~i~----~~~p-------~a~vlvvsNPv 130 (315)
T 3tl2_A 74 ------ADTADSDVVVITAGIAR-KP--GMSR---DDLVATNSKIMKSITRDIA----KHSP-------NAIIVVLTNPV 130 (315)
T ss_dssp ------GGGTTCSEEEECCSCCC-CT--TCCH---HHHHHHHHHHHHHHHHHHH----HHCT-------TCEEEECCSSH
T ss_pred ------HHhCCCCEEEEeCCCCC-CC--CCCH---HHHHHHHHHHHHHHHHHHH----HhCC-------CeEEEECCChH
Confidence 23457899999998642 21 1233 3456666654444444444 3322 36677777643
|
| >1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=97.31 E-value=0.00094 Score=56.00 Aligned_cols=80 Identities=19% Similarity=0.221 Sum_probs=53.3
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCC-HHHHHHHHHHHHH-HhC
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK-REDAVRVVESTIN-HFG 88 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~-~~~ 88 (249)
.|.++||+|+ |++|..++..+...|++|+++++++++++.+. + .|.. .+ .|.++ .+..+++.+.... ..+
T Consensus 168 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~---lGa~-~~--~~~~~~~~~~~~i~~~~~~~~g~ 239 (352)
T 1e3j_A 168 LGTTVLVIGA-GPIGLVSVLAAKAYGAFVVCTARSPRRLEVAK-N---CGAD-VT--LVVDPAKEEESSIIERIRSAIGD 239 (352)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-H---TTCS-EE--EECCTTTSCHHHHHHHHHHHSSS
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-H---hCCC-EE--EcCcccccHHHHHHHHhccccCC
Confidence 5789999997 89999999988889999999999887765443 2 3443 22 24443 2222332222110 013
Q ss_pred CccEEEEcCC
Q 025672 89 KLDILVNAAA 98 (249)
Q Consensus 89 ~id~vi~~ag 98 (249)
.+|++|.++|
T Consensus 240 g~D~vid~~g 249 (352)
T 1e3j_A 240 LPNVTIDCSG 249 (352)
T ss_dssp CCSEEEECSC
T ss_pred CCCEEEECCC
Confidence 6999999998
|
| >4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=97.30 E-value=0.00069 Score=57.13 Aligned_cols=76 Identities=14% Similarity=0.183 Sum_probs=52.1
Q ss_pred CCcEEEEecCCCchhHHHHHHHHH-cCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHH-hC
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGK-HGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH-FG 88 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~-~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~ 88 (249)
.|.++||+||+|++|...+..+.. .|++|+.+++++++++.+. + .|.... .|-.+ ++ .+++.+. .+
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~-~---lGad~v---i~~~~--~~---~~~v~~~~~~ 238 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVK-S---LGAHHV---IDHSK--PL---AAEVAALGLG 238 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHH-H---TTCSEE---ECTTS--CH---HHHHHTTCSC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHH-H---cCCCEE---EeCCC--CH---HHHHHHhcCC
Confidence 588999999999999887766655 5889999999887766543 2 344322 24433 22 2333332 24
Q ss_pred CccEEEEcCC
Q 025672 89 KLDILVNAAA 98 (249)
Q Consensus 89 ~id~vi~~ag 98 (249)
.+|++|.+.|
T Consensus 239 g~Dvvid~~g 248 (363)
T 4dvj_A 239 APAFVFSTTH 248 (363)
T ss_dssp CEEEEEECSC
T ss_pred CceEEEECCC
Confidence 7999999988
|
| >1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=97.29 E-value=0.00099 Score=56.32 Aligned_cols=74 Identities=20% Similarity=0.246 Sum_probs=54.2
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCc
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 90 (249)
.|.++||+|+ |++|..++..+...|++|+.+++++++++.+. ++ |... + +|..+.+.+++ +. +.+
T Consensus 194 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~-~l---Ga~~-v--i~~~~~~~~~~----~~---~g~ 258 (369)
T 1uuf_A 194 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAK-AL---GADE-V--VNSRNADEMAA----HL---KSF 258 (369)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH-HH---TCSE-E--EETTCHHHHHT----TT---TCE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc---CCcE-E--eccccHHHHHH----hh---cCC
Confidence 5889999998 89999999888889999999999988877554 34 3322 2 35555443222 21 579
Q ss_pred cEEEEcCCC
Q 025672 91 DILVNAAAG 99 (249)
Q Consensus 91 d~vi~~ag~ 99 (249)
|++|.++|.
T Consensus 259 Dvvid~~g~ 267 (369)
T 1uuf_A 259 DFILNTVAA 267 (369)
T ss_dssp EEEEECCSS
T ss_pred CEEEECCCC
Confidence 999999984
|
| >3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str} | Back alignment and structure |
|---|
Probab=97.28 E-value=0.0033 Score=53.12 Aligned_cols=84 Identities=18% Similarity=0.178 Sum_probs=57.7
Q ss_pred CCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccC-----------CCHHHHHH
Q 025672 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDV-----------RKREDAVR 78 (249)
Q Consensus 10 l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl-----------~~~~~~~~ 78 (249)
+.+++++|+|+ |.+|..+++.+...|++|++++|+.++++.+.+ + |. .++..|+ ...+....
T Consensus 182 v~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~-l---Ga--~~~~l~~~~~~~~gya~~~~~~~~~~ 254 (381)
T 3p2y_A 182 VKPASALVLGV-GVAGLQALATAKRLGAKTTGYDVRPEVAEQVRS-V---GA--QWLDLGIDAAGEGGYARELSEAERAQ 254 (381)
T ss_dssp ECCCEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHH-T---TC--EECCCC-------------CHHHHHH
T ss_pred cCCCEEEEECc-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-c---CC--eEEeccccccccccchhhhhHHHHhh
Confidence 57899999998 799999999999999999999999988777654 2 32 2333221 00111222
Q ss_pred HHHHHHHHhCCccEEEEcCCCC
Q 025672 79 VVESTINHFGKLDILVNAAAGN 100 (249)
Q Consensus 79 ~~~~~~~~~~~id~vi~~ag~~ 100 (249)
-.+.+.+.....|+||.++...
T Consensus 255 ~~~~l~e~l~~aDIVI~tv~iP 276 (381)
T 3p2y_A 255 QQQALEDAITKFDIVITTALVP 276 (381)
T ss_dssp HHHHHHHHHTTCSEEEECCCCT
T ss_pred hHHHHHHHHhcCCEEEECCCCC
Confidence 2334444557899999987543
|
| >1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=97.26 E-value=0.0013 Score=55.41 Aligned_cols=77 Identities=19% Similarity=0.250 Sum_probs=54.0
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHc-CCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhC-
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKH-GAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG- 88 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~-G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~- 88 (249)
.|.++||+|+ |++|...+..+... |++|+.+++++++++.+. + .|... + .|..+. +.+.+.++. .+
T Consensus 186 ~g~~VlV~Ga-G~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~-~---lGa~~-v--i~~~~~--~~~~v~~~~--~g~ 253 (359)
T 1h2b_A 186 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAE-R---LGADH-V--VDARRD--PVKQVMELT--RGR 253 (359)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHH-H---TTCSE-E--EETTSC--HHHHHHHHT--TTC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH-H---hCCCE-E--Eeccch--HHHHHHHHh--CCC
Confidence 5889999999 89999998888888 999999999887766543 3 34332 2 255543 333333221 13
Q ss_pred CccEEEEcCCC
Q 025672 89 KLDILVNAAAG 99 (249)
Q Consensus 89 ~id~vi~~ag~ 99 (249)
.+|++|.++|.
T Consensus 254 g~Dvvid~~G~ 264 (359)
T 1h2b_A 254 GVNVAMDFVGS 264 (359)
T ss_dssp CEEEEEESSCC
T ss_pred CCcEEEECCCC
Confidence 69999999983
|
| >1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A | Back alignment and structure |
|---|
Probab=97.26 E-value=0.00048 Score=58.02 Aligned_cols=75 Identities=23% Similarity=0.252 Sum_probs=53.3
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCc
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 90 (249)
.|.++||+|+ |++|..++..+...|++|+.+++++++++.+.+ + |... ++ |..+.++ +.+++. +++
T Consensus 179 ~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~-l---Ga~~-v~--~~~~~~~---~~~~~~---~~~ 244 (360)
T 1piw_A 179 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAMK-M---GADH-YI--ATLEEGD---WGEKYF---DTF 244 (360)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH-H---TCSE-EE--EGGGTSC---HHHHSC---SCE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH-c---CCCE-EE--cCcCchH---HHHHhh---cCC
Confidence 5899999999 999999999888899999999999887765543 3 3322 22 4333211 112221 579
Q ss_pred cEEEEcCCC
Q 025672 91 DILVNAAAG 99 (249)
Q Consensus 91 d~vi~~ag~ 99 (249)
|++|.+.|.
T Consensus 245 D~vid~~g~ 253 (360)
T 1piw_A 245 DLIVVCASS 253 (360)
T ss_dssp EEEEECCSC
T ss_pred CEEEECCCC
Confidence 999999985
|
| >3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha} | Back alignment and structure |
|---|
Probab=97.25 E-value=0.0011 Score=56.33 Aligned_cols=80 Identities=18% Similarity=0.167 Sum_probs=54.6
Q ss_pred CCcEEEEec-CCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCC
Q 025672 11 KGKVALLTG-GGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK 89 (249)
Q Consensus 11 ~~k~~lItG-a~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 89 (249)
.+.++||.| |+|++|...+..+...|++|+.+++++++++.+.+ .|.... .|..+.+-.+.+.+.. .. ..
T Consensus 170 ~g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~~~~~~~~~~----lGa~~~---~~~~~~~~~~~v~~~t-~~-~g 240 (379)
T 3iup_A 170 EGHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQADLLKA----QGAVHV---CNAASPTFMQDLTEAL-VS-TG 240 (379)
T ss_dssp TTCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEESSHHHHHHHHH----TTCSCE---EETTSTTHHHHHHHHH-HH-HC
T ss_pred CCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHh----CCCcEE---EeCCChHHHHHHHHHh-cC-CC
Confidence 477899997 99999999999888899999999998877665442 343322 2444433223322222 11 26
Q ss_pred ccEEEEcCCC
Q 025672 90 LDILVNAAAG 99 (249)
Q Consensus 90 id~vi~~ag~ 99 (249)
+|++|.+.|.
T Consensus 241 ~d~v~d~~g~ 250 (379)
T 3iup_A 241 ATIAFDATGG 250 (379)
T ss_dssp CCEEEESCEE
T ss_pred ceEEEECCCc
Confidence 9999999984
|
| >2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ... | Back alignment and structure |
|---|
Probab=97.24 E-value=0.001 Score=56.22 Aligned_cols=79 Identities=18% Similarity=0.261 Sum_probs=54.4
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCC-HHHHHHHHHHHHHHhC
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK-REDAVRVVESTINHFG 88 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~ 88 (249)
.|.++||+|+ |+||..++..+...|+ +|+.+++++++++.+. ++ |... + +|..+ .+++.+.+.++.. +
T Consensus 191 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~-~l---Ga~~-v--i~~~~~~~~~~~~~~~~~~--~ 260 (374)
T 2jhf_A 191 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAK-EV---GATE-C--VNPQDYKKPIQEVLTEMSN--G 260 (374)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HT---TCSE-E--ECGGGCSSCHHHHHHHHTT--S
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-Hh---CCce-E--ecccccchhHHHHHHHHhC--C
Confidence 5889999995 8999999998888999 7999999988776543 33 4322 2 24443 1233333333321 4
Q ss_pred CccEEEEcCCC
Q 025672 89 KLDILVNAAAG 99 (249)
Q Consensus 89 ~id~vi~~ag~ 99 (249)
.+|++|.++|.
T Consensus 261 g~D~vid~~g~ 271 (374)
T 2jhf_A 261 GVDFSFEVIGR 271 (374)
T ss_dssp CBSEEEECSCC
T ss_pred CCcEEEECCCC
Confidence 79999999983
|
| >3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A* | Back alignment and structure |
|---|
Probab=97.22 E-value=0.002 Score=53.57 Aligned_cols=58 Identities=22% Similarity=0.201 Sum_probs=44.3
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCC-eEEEEeCCc-------------------chHHHHHHHHHhcCCCeeEEE
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRK-------------------TVLRSAVAALHSLGIPAIGLE 67 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~-~v~l~~r~~-------------------~~~~~~~~~~~~~~~~~~~~~ 67 (249)
.+++++|+|.|+ ||+|.++++.|+..|. ++.++|++. .+.+.+++.+...+..+.+..
T Consensus 31 kL~~~~VlIvGa-GGlGs~va~~La~aGVg~ItlvD~D~Ve~SNL~RQ~l~~~~diG~~Ka~aaa~~L~~inP~v~v~~ 108 (340)
T 3rui_A 31 IIKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATG 108 (340)
T ss_dssp HHHTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCBCCTTSTTTSTTCCGGGTTSBHHHHHHHHHHHHCTTCEEEE
T ss_pred HHhCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEecCCEeccccccccccCChhhcChHHHHHHHHHHHHhCCCCEEEE
Confidence 367899999987 5999999999999998 799988754 456667777766655544433
|
| >1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A* | Back alignment and structure |
|---|
Probab=97.21 E-value=0.0014 Score=55.39 Aligned_cols=79 Identities=19% Similarity=0.220 Sum_probs=54.2
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCC-HHHHHHHHHHHHHHhC
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK-REDAVRVVESTINHFG 88 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~ 88 (249)
.|.++||+|+ |+||..++..+...|+ +|+.+++++++++.+. + .|... + +|.++ .+++.+.+.++.. +
T Consensus 195 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~---lGa~~-v--i~~~~~~~~~~~~v~~~~~--~ 264 (376)
T 1e3i_A 195 PGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKAK-A---LGATD-C--LNPRELDKPVQDVITELTA--G 264 (376)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-H---TTCSE-E--ECGGGCSSCHHHHHHHHHT--S
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-H---hCCcE-E--EccccccchHHHHHHHHhC--C
Confidence 5889999996 8999999988888999 7999999988776543 3 34322 2 24443 1233333333322 4
Q ss_pred CccEEEEcCCC
Q 025672 89 KLDILVNAAAG 99 (249)
Q Consensus 89 ~id~vi~~ag~ 99 (249)
.+|++|.+.|.
T Consensus 265 g~Dvvid~~G~ 275 (376)
T 1e3i_A 265 GVDYSLDCAGT 275 (376)
T ss_dssp CBSEEEESSCC
T ss_pred CccEEEECCCC
Confidence 79999999983
|
| >1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A | Back alignment and structure |
|---|
Probab=97.19 E-value=0.0036 Score=52.48 Aligned_cols=78 Identities=21% Similarity=0.301 Sum_probs=52.7
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCC--CHHHHHHHHHHHHHHh
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVR--KREDAVRVVESTINHF 87 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~--~~~~~~~~~~~~~~~~ 87 (249)
.|.++||+|+ |++|...+..+...|+ +|+.+++++++++.+. + .|.. .+ .|.. +.+++.+.+.+...
T Consensus 171 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~---lGa~-~v--i~~~~~~~~~~~~~i~~~~~-- 240 (356)
T 1pl8_A 171 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAK-E---IGAD-LV--LQISKESPQEIARKVEGQLG-- 240 (356)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-H---TTCS-EE--EECSSCCHHHHHHHHHHHHT--
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-H---hCCC-EE--EcCcccccchHHHHHHHHhC--
Confidence 5789999996 8999999888888999 8999999887665443 3 3443 22 2444 22333222222211
Q ss_pred CCccEEEEcCC
Q 025672 88 GKLDILVNAAA 98 (249)
Q Consensus 88 ~~id~vi~~ag 98 (249)
+.+|++|.++|
T Consensus 241 ~g~D~vid~~g 251 (356)
T 1pl8_A 241 CKPEVTIECTG 251 (356)
T ss_dssp SCCSEEEECSC
T ss_pred CCCCEEEECCC
Confidence 47999999998
|
| >2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A* | Back alignment and structure |
|---|
Probab=97.19 E-value=0.00088 Score=56.32 Aligned_cols=75 Identities=13% Similarity=0.105 Sum_probs=53.7
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCc
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 90 (249)
.|.++||+|+ |+||...+..+...|++|+.+++++++.+.+.+++ |... + .|..+.+.+. +..+.+
T Consensus 180 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~l---Ga~~-v--i~~~~~~~~~-------~~~~g~ 245 (357)
T 2cf5_A 180 PGLRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDL---GADD-Y--VIGSDQAKMS-------ELADSL 245 (357)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTS---CCSC-E--EETTCHHHHH-------HSTTTE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHc---CCce-e--eccccHHHHH-------HhcCCC
Confidence 6889999995 99999999988889999999999887766544333 4332 2 2445543322 222579
Q ss_pred cEEEEcCCC
Q 025672 91 DILVNAAAG 99 (249)
Q Consensus 91 d~vi~~ag~ 99 (249)
|++|.++|.
T Consensus 246 D~vid~~g~ 254 (357)
T 2cf5_A 246 DYVIDTVPV 254 (357)
T ss_dssp EEEEECCCS
T ss_pred CEEEECCCC
Confidence 999999984
|
| >4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major} | Back alignment and structure |
|---|
Probab=97.19 E-value=0.0095 Score=49.74 Aligned_cols=110 Identities=11% Similarity=0.137 Sum_probs=65.5
Q ss_pred CCCCCCCcEEEEecCCCchhHHHHHHHHHcCC-------eEEEEeCCcc--hHHHHHHHHHhcCC--CeeEEEccCCCHH
Q 025672 6 KGDILKGKVALLTGGGSGIGFEISLQLGKHGA-------AIAIMGRRKT--VLRSAVAALHSLGI--PAIGLEGDVRKRE 74 (249)
Q Consensus 6 ~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~-------~v~l~~r~~~--~~~~~~~~~~~~~~--~~~~~~~Dl~~~~ 74 (249)
.+..++.-+|.|+||+|+||+.++..|++... ++.|+|.++. .++...-++.+... ....+.. +|.
T Consensus 18 ~~~s~~~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~~~~~~~~~~~~--~~~- 94 (345)
T 4h7p_A 18 GPGSMSAVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDCAFPLLDKVVVT--ADP- 94 (345)
T ss_dssp ----CCCEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTTCTTEEEEEEE--SCH-
T ss_pred CCCCCCCCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhhcCccCCCcEEEc--CCh-
Confidence 34556778999999999999999999987643 6889998754 34555555654321 1122211 121
Q ss_pred HHHHHHHHHHHHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHh
Q 025672 75 DAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKK 137 (249)
Q Consensus 75 ~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~ 137 (249)
. +.+..-|+||..||... ++ ..+.+ +.++.|.. +++.+.+.+.+
T Consensus 95 --~-------~a~~~advVvi~aG~pr-kp--GmtR~---DLl~~Na~----I~~~~~~~i~~ 138 (345)
T 4h7p_A 95 --R-------VAFDGVAIAIMCGAFPR-KA--GMERK---DLLEMNAR----IFKEQGEAIAA 138 (345)
T ss_dssp --H-------HHTTTCSEEEECCCCCC-CT--TCCHH---HHHHHHHH----HHHHHHHHHHH
T ss_pred --H-------HHhCCCCEEEECCCCCC-CC--CCCHH---HHHHHhHH----HHHHHHHHHHh
Confidence 1 22456899999999643 22 23444 44667765 44444555544
|
| >1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=97.18 E-value=0.0019 Score=54.71 Aligned_cols=78 Identities=18% Similarity=0.328 Sum_probs=54.3
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcC-CeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCC--CHHHHHHHHHHHHHHh
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHG-AAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVR--KREDAVRVVESTINHF 87 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G-~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~--~~~~~~~~~~~~~~~~ 87 (249)
.|.++||+| +|++|...+..+...| ++|+.+++++++++.+. + .|.. .++ |.. +.+++.+. +.+..
T Consensus 195 ~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~-~---lGa~-~vi--~~~~~~~~~~~~~---v~~~~ 263 (380)
T 1vj0_A 195 AGKTVVIQG-AGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAE-E---IGAD-LTL--NRRETSVEERRKA---IMDIT 263 (380)
T ss_dssp BTCEEEEEC-CSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHH-H---TTCS-EEE--ETTTSCHHHHHHH---HHHHT
T ss_pred CCCEEEEEC-cCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHH-H---cCCc-EEE--eccccCcchHHHH---HHHHh
Confidence 488999999 8999999999888899 59999999887766543 2 3433 222 433 23443333 33332
Q ss_pred -C-CccEEEEcCCC
Q 025672 88 -G-KLDILVNAAAG 99 (249)
Q Consensus 88 -~-~id~vi~~ag~ 99 (249)
+ .+|++|.++|.
T Consensus 264 ~g~g~Dvvid~~g~ 277 (380)
T 1vj0_A 264 HGRGADFILEATGD 277 (380)
T ss_dssp TTSCEEEEEECSSC
T ss_pred CCCCCcEEEECCCC
Confidence 2 69999999983
|
| >4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A* | Back alignment and structure |
|---|
Probab=97.17 E-value=0.0083 Score=48.62 Aligned_cols=42 Identities=21% Similarity=0.255 Sum_probs=36.5
Q ss_pred cEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHH
Q 025672 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAA 55 (249)
Q Consensus 13 k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~ 55 (249)
+++.|.|+ |.+|..+|..|++.|++|++.+++++.++...+.
T Consensus 5 ~kV~VIGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~ 46 (283)
T 4e12_A 5 TNVTVLGT-GVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKR 46 (283)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHH
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHH
Confidence 57788875 7899999999999999999999999888776655
|
| >3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum} | Back alignment and structure |
|---|
Probab=97.17 E-value=0.00033 Score=56.97 Aligned_cols=47 Identities=15% Similarity=0.162 Sum_probs=40.6
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCC-eEEEEeCCcchHHHHHHH
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAA 55 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~-~v~l~~r~~~~~~~~~~~ 55 (249)
.++++|+++|+|+ ||.|++++..|.+.|+ +|+++.|+.++.++++++
T Consensus 118 ~~~~~k~vlvlGa-GGaaraia~~L~~~G~~~v~v~nRt~~ka~~La~~ 165 (282)
T 3fbt_A 118 VEIKNNICVVLGS-GGAARAVLQYLKDNFAKDIYVVTRNPEKTSEIYGE 165 (282)
T ss_dssp CCCTTSEEEEECS-STTHHHHHHHHHHTTCSEEEEEESCHHHHHHHCTT
T ss_pred CCccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHh
Confidence 4578999999997 6999999999999998 899999998877766543
|
| >3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=97.15 E-value=0.00083 Score=56.23 Aligned_cols=69 Identities=19% Similarity=0.301 Sum_probs=51.8
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCc
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 90 (249)
.|.++||+|+ |+||...+..+...|++|+.+++++++.+.+. +.|....+ ++.+.+.+ .+
T Consensus 176 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~----~lGa~~v~-----~~~~~~~~----------~~ 235 (348)
T 3two_A 176 KGTKVGVAGF-GGLGSMAVKYAVAMGAEVSVFARNEHKKQDAL----SMGVKHFY-----TDPKQCKE----------EL 235 (348)
T ss_dssp TTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSSTTHHHHH----HTTCSEEE-----SSGGGCCS----------CE
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH----hcCCCeec-----CCHHHHhc----------CC
Confidence 5899999997 89999999888889999999999988876543 23443333 34333221 69
Q ss_pred cEEEEcCCC
Q 025672 91 DILVNAAAG 99 (249)
Q Consensus 91 d~vi~~ag~ 99 (249)
|++|.+.|.
T Consensus 236 D~vid~~g~ 244 (348)
T 3two_A 236 DFIISTIPT 244 (348)
T ss_dssp EEEEECCCS
T ss_pred CEEEECCCc
Confidence 999999984
|
| >2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A* | Back alignment and structure |
|---|
Probab=97.13 E-value=0.0013 Score=55.54 Aligned_cols=79 Identities=18% Similarity=0.230 Sum_probs=54.2
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCC-HHHHHHHHHHHHHHhC
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK-REDAVRVVESTINHFG 88 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~ 88 (249)
.|.++||+|+ |++|...+..+...|+ +|+.+++++++++.+. ++ |... + .|.++ .+++.+.+.++.. +
T Consensus 190 ~g~~VlV~Ga-G~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~-~l---Ga~~-v--i~~~~~~~~~~~~v~~~~~--~ 259 (373)
T 2fzw_A 190 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARAK-EF---GATE-C--INPQDFSKPIQEVLIEMTD--G 259 (373)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH-HH---TCSE-E--ECGGGCSSCHHHHHHHHTT--S
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-Hc---CCce-E--eccccccccHHHHHHHHhC--C
Confidence 5889999996 8999999988888999 7999999888776543 34 3322 2 24443 1233333333221 4
Q ss_pred CccEEEEcCCC
Q 025672 89 KLDILVNAAAG 99 (249)
Q Consensus 89 ~id~vi~~ag~ 99 (249)
.+|++|.++|.
T Consensus 260 g~D~vid~~g~ 270 (373)
T 2fzw_A 260 GVDYSFECIGN 270 (373)
T ss_dssp CBSEEEECSCC
T ss_pred CCCEEEECCCc
Confidence 79999999983
|
| >2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus} | Back alignment and structure |
|---|
Probab=97.12 E-value=0.0011 Score=55.40 Aligned_cols=77 Identities=14% Similarity=0.116 Sum_probs=52.8
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHc--CCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhC
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKH--GAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~--G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 88 (249)
.|.++||+|+ |+||...+..+... |++|+.+++++++++.+. ++ |... ++ |..+. +..++++.+ ..
T Consensus 170 ~g~~VlV~Ga-G~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~-~l---Ga~~-vi--~~~~~---~~~~~~~~~-g~ 237 (344)
T 2h6e_A 170 AEPVVIVNGI-GGLAVYTIQILKALMKNITIVGISRSKKHRDFAL-EL---GADY-VS--EMKDA---ESLINKLTD-GL 237 (344)
T ss_dssp SSCEEEEECC-SHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHH-HH---TCSE-EE--CHHHH---HHHHHHHHT-TC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHH-Hh---CCCE-Ee--ccccc---hHHHHHhhc-CC
Confidence 7899999999 89999999888888 999999999887766543 33 3322 22 33220 122333322 12
Q ss_pred CccEEEEcCCC
Q 025672 89 KLDILVNAAAG 99 (249)
Q Consensus 89 ~id~vi~~ag~ 99 (249)
++|++|.++|.
T Consensus 238 g~D~vid~~g~ 248 (344)
T 2h6e_A 238 GASIAIDLVGT 248 (344)
T ss_dssp CEEEEEESSCC
T ss_pred CccEEEECCCC
Confidence 79999999983
|
| >3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=97.11 E-value=0.00049 Score=55.11 Aligned_cols=70 Identities=17% Similarity=0.156 Sum_probs=49.8
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
.+++ +++|.|+ ||.|++++..|.+.|+ +|++++|+.++.+++.+++ ... + .+++.+.+
T Consensus 106 ~~~~-~vliiGa-Gg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~la~~~-------~~~--~---~~~~~~~~------- 164 (253)
T 3u62_A 106 EVKE-PVVVVGA-GGAARAVIYALLQMGVKDIWVVNRTIERAKALDFPV-------KIF--S---LDQLDEVV------- 164 (253)
T ss_dssp CCCS-SEEEECC-SHHHHHHHHHHHHTTCCCEEEEESCHHHHHTCCSSC-------EEE--E---GGGHHHHH-------
T ss_pred CCCC-eEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHc-------ccC--C---HHHHHhhh-------
Confidence 4678 8999987 8999999999999998 8999999987766544322 111 1 12333332
Q ss_pred CCccEEEEcCCC
Q 025672 88 GKLDILVNAAAG 99 (249)
Q Consensus 88 ~~id~vi~~ag~ 99 (249)
...|+||++...
T Consensus 165 ~~aDiVInatp~ 176 (253)
T 3u62_A 165 KKAKSLFNTTSV 176 (253)
T ss_dssp HTCSEEEECSST
T ss_pred cCCCEEEECCCC
Confidence 257999998753
|
| >3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A* | Back alignment and structure |
|---|
Probab=97.11 E-value=0.0034 Score=53.04 Aligned_cols=78 Identities=14% Similarity=0.031 Sum_probs=53.4
Q ss_pred CCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHH-hC
Q 025672 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH-FG 88 (249)
Q Consensus 10 l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~ 88 (249)
-.|.++||+|++|++|...+..+...|++|+.+. ++++++ ..++ .|... + .|..+.+-. +++.+. .+
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~-~~~~---lGa~~-v--i~~~~~~~~----~~v~~~t~g 230 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFD-LAKS---RGAEE-V--FDYRAPNLA----QTIRTYTKN 230 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHH-HHHH---TTCSE-E--EETTSTTHH----HHHHHHTTT
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHH-HHHH---cCCcE-E--EECCCchHH----HHHHHHccC
Confidence 4689999999999999999999989999988876 555554 3333 34332 2 255554322 223332 24
Q ss_pred CccEEEEcCCC
Q 025672 89 KLDILVNAAAG 99 (249)
Q Consensus 89 ~id~vi~~ag~ 99 (249)
++|++|.+.|.
T Consensus 231 ~~d~v~d~~g~ 241 (371)
T 3gqv_A 231 NLRYALDCITN 241 (371)
T ss_dssp CCCEEEESSCS
T ss_pred CccEEEECCCc
Confidence 69999999983
|
| >1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A* | Back alignment and structure |
|---|
Probab=97.11 E-value=0.0023 Score=54.43 Aligned_cols=44 Identities=14% Similarity=0.114 Sum_probs=39.0
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHH
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAV 53 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~ 53 (249)
.+.+++++|+|+ |++|..+++.+...|++|++++++..+++...
T Consensus 169 ~l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~~ 212 (384)
T 1l7d_A 169 TVPPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVE 212 (384)
T ss_dssp EECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHH
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 468999999996 89999999999999999999999988776654
|
| >1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A* | Back alignment and structure |
|---|
Probab=97.10 E-value=0.0016 Score=54.98 Aligned_cols=79 Identities=23% Similarity=0.306 Sum_probs=53.5
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCC-HHHHHHHHHHHHHHhC
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK-REDAVRVVESTINHFG 88 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~ 88 (249)
.|.++||+|+ |+||...+..+...|+ +|+.+++++++++.+. + .|... + .|..+ .+++.+.+.++. .+
T Consensus 191 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~---lGa~~-v--i~~~~~~~~~~~~i~~~t--~g 260 (373)
T 1p0f_A 191 PGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAI-E---LGATE-C--LNPKDYDKPIYEVICEKT--NG 260 (373)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH-H---TTCSE-E--ECGGGCSSCHHHHHHHHT--TS
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHH-H---cCCcE-E--EecccccchHHHHHHHHh--CC
Confidence 5889999995 8999999888888999 7999999888776543 3 34332 2 24332 122333333221 14
Q ss_pred CccEEEEcCCC
Q 025672 89 KLDILVNAAAG 99 (249)
Q Consensus 89 ~id~vi~~ag~ 99 (249)
.+|++|.++|.
T Consensus 261 g~Dvvid~~g~ 271 (373)
T 1p0f_A 261 GVDYAVECAGR 271 (373)
T ss_dssp CBSEEEECSCC
T ss_pred CCCEEEECCCC
Confidence 79999999983
|
| >3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A* | Back alignment and structure |
|---|
Probab=97.10 E-value=0.0036 Score=51.91 Aligned_cols=116 Identities=15% Similarity=0.135 Sum_probs=71.3
Q ss_pred CCCcEEEEecCCCchhHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhc------CCCeeEEEccCCCHHHHHHHHHH
Q 025672 10 LKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSL------GIPAIGLEGDVRKREDAVRVVES 82 (249)
Q Consensus 10 l~~k~~lItGa~~giG~~~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~------~~~~~~~~~Dl~~~~~~~~~~~~ 82 (249)
++.+.+.|+|+ |.+|.+++..|+..|. +|+++|+++++++....++.+. ..++.. ..| .
T Consensus 5 m~~~kI~viGa-G~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~-t~d---~--------- 70 (324)
T 3gvi_A 5 MARNKIALIGS-GMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTG-AND---Y--------- 70 (324)
T ss_dssp -CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEE-ESS---G---------
T ss_pred CcCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEE-eCC---H---------
Confidence 45678999998 9999999999999998 9999999998876555555432 222221 112 1
Q ss_pred HHHHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccc
Q 025672 83 TINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL 158 (249)
Q Consensus 83 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~ 158 (249)
+.+..-|+||.++|.... + ..+. .+.+..|+.- ++.+.+.+.+..+ .+.++++|...
T Consensus 71 --~a~~~aDiVIiaag~p~k-~--G~~R---~dl~~~N~~i----~~~i~~~i~~~~p-------~a~iivvtNPv 127 (324)
T 3gvi_A 71 --AAIEGADVVIVTAGVPRK-P--GMSR---DDLLGINLKV----MEQVGAGIKKYAP-------EAFVICITNPL 127 (324)
T ss_dssp --GGGTTCSEEEECCSCCCC-----------CHHHHHHHHH----HHHHHHHHHHHCT-------TCEEEECCSSH
T ss_pred --HHHCCCCEEEEccCcCCC-C--CCCH---HHHHHhhHHH----HHHHHHHHHHHCC-------CeEEEecCCCc
Confidence 123467999999985321 1 1122 2345555544 4444444444332 36777777654
|
| >3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=97.09 E-value=0.001 Score=56.38 Aligned_cols=79 Identities=14% Similarity=0.159 Sum_probs=54.3
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCC-HHHHHHHHHHHHHHhC
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK-REDAVRVVESTINHFG 88 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~ 88 (249)
.|.++||+|+ |+||...+..+...|+ +|+.+++++++++.+ + +.|... + .|..+ .+++.+.+.++. .+
T Consensus 193 ~g~~VlV~Ga-G~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a-~---~lGa~~-v--i~~~~~~~~~~~~i~~~~--~g 262 (378)
T 3uko_A 193 PGSNVAIFGL-GTVGLAVAEGAKTAGASRIIGIDIDSKKYETA-K---KFGVNE-F--VNPKDHDKPIQEVIVDLT--DG 262 (378)
T ss_dssp TTCCEEEECC-SHHHHHHHHHHHHHTCSCEEEECSCTTHHHHH-H---TTTCCE-E--ECGGGCSSCHHHHHHHHT--TS
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-H---HcCCcE-E--EccccCchhHHHHHHHhc--CC
Confidence 5889999998 9999999988888999 799999998876643 2 334332 2 24432 223333333322 24
Q ss_pred CccEEEEcCCC
Q 025672 89 KLDILVNAAAG 99 (249)
Q Consensus 89 ~id~vi~~ag~ 99 (249)
.+|++|.++|.
T Consensus 263 g~D~vid~~g~ 273 (378)
T 3uko_A 263 GVDYSFECIGN 273 (378)
T ss_dssp CBSEEEECSCC
T ss_pred CCCEEEECCCC
Confidence 79999999983
|
| >4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=97.07 E-value=0.0041 Score=52.94 Aligned_cols=44 Identities=11% Similarity=0.192 Sum_probs=38.9
Q ss_pred CCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHH
Q 025672 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVA 54 (249)
Q Consensus 10 l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~ 54 (249)
+.+.+++|+|+ |.+|..+++.+...|++|++++++..+++.+.+
T Consensus 188 v~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~ 231 (405)
T 4dio_A 188 VPAAKIFVMGA-GVAGLQAIATARRLGAVVSATDVRPAAKEQVAS 231 (405)
T ss_dssp ECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSTTHHHHHHH
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH
Confidence 56889999998 799999999999999999999999987766543
|
| >4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A* | Back alignment and structure |
|---|
Probab=97.04 E-value=0.0012 Score=55.88 Aligned_cols=80 Identities=20% Similarity=0.234 Sum_probs=52.6
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCC
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK 89 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 89 (249)
.|.++||+|+ |++|...+..+...|+ +|+.+++++++.+ +.+++ |.... .|.++.+-.+.+.+......+.
T Consensus 182 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~-~a~~l---Ga~~v---i~~~~~~~~~~i~~~~~~~~gg 253 (370)
T 4ej6_A 182 AGSTVAILGG-GVIGLLTVQLARLAGATTVILSTRQATKRR-LAEEV---GATAT---VDPSAGDVVEAIAGPVGLVPGG 253 (370)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHH-HHHHH---TCSEE---ECTTSSCHHHHHHSTTSSSTTC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHH-HHHHc---CCCEE---ECCCCcCHHHHHHhhhhccCCC
Confidence 4889999998 8999999988888999 7888988877655 33344 33322 2555443222221100011247
Q ss_pred ccEEEEcCC
Q 025672 90 LDILVNAAA 98 (249)
Q Consensus 90 id~vi~~ag 98 (249)
+|++|.++|
T Consensus 254 ~Dvvid~~G 262 (370)
T 4ej6_A 254 VDVVIECAG 262 (370)
T ss_dssp EEEEEECSC
T ss_pred CCEEEECCC
Confidence 999999988
|
| >1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A* | Back alignment and structure |
|---|
Probab=97.03 E-value=0.016 Score=47.23 Aligned_cols=114 Identities=11% Similarity=0.069 Sum_probs=70.6
Q ss_pred EEEEecCCCchhHHHHHHHHHcCC--eEEEEeCCcchHHHHHHHHHhc----CCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 14 VALLTGGGSGIGFEISLQLGKHGA--AIAIMGRRKTVLRSAVAALHSL----GIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 14 ~~lItGa~~giG~~~a~~l~~~G~--~v~l~~r~~~~~~~~~~~~~~~----~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
.+.|+|+ |.+|.+++..|+..|. +|+++++++++++....++.+. .....+... +|.+ .+
T Consensus 2 kI~ViGa-G~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t--~d~~-----------a~ 67 (294)
T 1oju_A 2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG--ADYS-----------LL 67 (294)
T ss_dssp EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEE--SCGG-----------GG
T ss_pred EEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEe--CCHH-----------Hh
Confidence 5789999 9999999999999998 8999999998776444333321 112222211 1221 22
Q ss_pred CCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccc
Q 025672 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL 158 (249)
Q Consensus 88 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~ 158 (249)
..-|+||.++|.... + ..+.. +.++.|+ .+++.+.+.+.+..+ .+.|+++|...
T Consensus 68 ~~aDiVViaag~~~k-p--G~~R~---dl~~~N~----~i~~~i~~~i~~~~p-------~a~iivvsNPv 121 (294)
T 1oju_A 68 KGSEIIVVTAGLARK-P--GMTRL---DLAHKNA----GIIKDIAKKIVENAP-------ESKILVVTNPM 121 (294)
T ss_dssp TTCSEEEECCCCCCC-S--SCCHH---HHHHHHH----HHHHHHHHHHHTTST-------TCEEEECSSSH
T ss_pred CCCCEEEECCCCCCC-C--CCcHH---HHHHHHH----HHHHHHHHHHHhhCC-------CeEEEEeCCcc
Confidence 457999999986421 1 12333 3355564 345555666655433 37788877654
|
| >3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1 | Back alignment and structure |
|---|
Probab=97.01 E-value=0.025 Score=46.91 Aligned_cols=116 Identities=9% Similarity=-0.023 Sum_probs=72.8
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCC--eEEEEeCCcchHHHHHHHHHhc---CCCeeEE-EccCCCHHHHHHHHHHHH
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGA--AIAIMGRRKTVLRSAVAALHSL---GIPAIGL-EGDVRKREDAVRVVESTI 84 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~--~v~l~~r~~~~~~~~~~~~~~~---~~~~~~~-~~Dl~~~~~~~~~~~~~~ 84 (249)
..+.+.|+|+ |.+|..++..|+..|. +|+++|.+++.++....++.+. .....+. ..|..+
T Consensus 20 ~~~kV~ViGa-G~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~t~d~~~------------ 86 (330)
T 3ldh_A 20 SYNKITVVGC-DAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVSGKDYSV------------ 86 (330)
T ss_dssp CCCEEEEEST-THHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEEESSSCS------------
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEEcCCHHH------------
Confidence 4578999998 9999999999999997 8999999988887766666532 1111222 223221
Q ss_pred HHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccc
Q 025672 85 NHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL 158 (249)
Q Consensus 85 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~ 158 (249)
+..-|+||.++|.... + ..+. .+.+..|..- .+.+.+.+.+..+ .+.++++|...
T Consensus 87 --~~daDiVIitaG~p~k-p--G~tR---~dll~~N~~I----~k~i~~~I~k~~P-------~a~ilvvtNPv 141 (330)
T 3ldh_A 87 --SAGSKLVVITAGARQQ-E--GESR---LNLVQRNVNI----FKFIIPNIVKHSP-------DCLKELHPELG 141 (330)
T ss_dssp --CSSCSEEEECCSCCCC-S--SCCT---TGGGHHHHHH----HHHHHHHHHHHCT-------TCEEEECSSSH
T ss_pred --hCCCCEEEEeCCCCCC-C--CCCH---HHHHHhhHHH----HHHHHHHHHhhCC-------CceEEeCCCcc
Confidence 3468999999986432 1 1222 2344555543 4444444444322 36677777654
|
| >3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=97.01 E-value=0.0038 Score=51.04 Aligned_cols=85 Identities=11% Similarity=0.072 Sum_probs=61.8
Q ss_pred CcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHH-------HHhcCCCeeEEEccCCCHHHHHHHHHHHH
Q 025672 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAA-------LHSLGIPAIGLEGDVRKREDAVRVVESTI 84 (249)
Q Consensus 12 ~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~-------~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 84 (249)
.+++.|.| .|.+|..++..|++.|++|++++|++++.+.+.+. +.+.-. ..++-.-+.+...++.+++.+.
T Consensus 15 ~~~I~vIG-~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~-aDvvi~~vp~~~~~~~v~~~l~ 92 (296)
T 3qha_A 15 QLKLGYIG-LGNMGAPMATRMTEWPGGVTVYDIRIEAMTPLAEAGATLADSVADVAA-ADLIHITVLDDAQVREVVGELA 92 (296)
T ss_dssp CCCEEEEC-CSTTHHHHHHHHTTSTTCEEEECSSTTTSHHHHHTTCEECSSHHHHTT-SSEEEECCSSHHHHHHHHHHHH
T ss_pred CCeEEEEC-cCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCEEcCCHHHHHh-CCEEEEECCChHHHHHHHHHHH
Confidence 35677887 57999999999999999999999999887766532 111111 4455566777788888888777
Q ss_pred HHhCCccEEEEcCC
Q 025672 85 NHFGKLDILVNAAA 98 (249)
Q Consensus 85 ~~~~~id~vi~~ag 98 (249)
+...+-.+||++..
T Consensus 93 ~~l~~g~ivv~~st 106 (296)
T 3qha_A 93 GHAKPGTVIAIHST 106 (296)
T ss_dssp TTCCTTCEEEECSC
T ss_pred HhcCCCCEEEEeCC
Confidence 65555567777665
|
| >2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A* | Back alignment and structure |
|---|
Probab=96.99 E-value=0.0017 Score=54.56 Aligned_cols=75 Identities=17% Similarity=0.320 Sum_probs=52.0
Q ss_pred CCCcEEEEecCCCchhHHH-HHHH-HHcCCe-EEEEeCCcc---hHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHH
Q 025672 10 LKGKVALLTGGGSGIGFEI-SLQL-GKHGAA-IAIMGRRKT---VLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVEST 83 (249)
Q Consensus 10 l~~k~~lItGa~~giG~~~-a~~l-~~~G~~-v~l~~r~~~---~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 83 (249)
+++.++||+|+ |++|... +..+ ...|++ |+.++++++ +++.+. ++ |. ..+ |..+. ++.+ +.++
T Consensus 171 ~~~~~VlV~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~-~l---Ga--~~v--~~~~~-~~~~-i~~~ 239 (357)
T 2b5w_A 171 WDPSSAFVLGN-GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIE-EL---DA--TYV--DSRQT-PVED-VPDV 239 (357)
T ss_dssp CCCCEEEEECC-SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHH-HT---TC--EEE--ETTTS-CGGG-HHHH
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHH-Hc---CC--ccc--CCCcc-CHHH-HHHh
Confidence 44589999999 9999998 7766 678997 999999887 665543 33 33 223 55443 2333 3333
Q ss_pred HHHhCCccEEEEcCC
Q 025672 84 INHFGKLDILVNAAA 98 (249)
Q Consensus 84 ~~~~~~id~vi~~ag 98 (249)
.+.+|++|.+.|
T Consensus 240 ---~gg~Dvvid~~g 251 (357)
T 2b5w_A 240 ---YEQMDFIYEATG 251 (357)
T ss_dssp ---SCCEEEEEECSC
T ss_pred ---CCCCCEEEECCC
Confidence 247999999998
|
| >3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=96.98 E-value=0.0016 Score=53.82 Aligned_cols=73 Identities=15% Similarity=0.259 Sum_probs=50.9
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCc
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 90 (249)
.|.+++|+||+|++|...+..+...|++|+.++++ ++ .+..+++ |... + .|..+.+.+.+ ....+
T Consensus 152 ~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~-~~-~~~~~~l---Ga~~-~--i~~~~~~~~~~-------~~~g~ 216 (321)
T 3tqh_A 152 QGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASK-RN-HAFLKAL---GAEQ-C--INYHEEDFLLA-------ISTPV 216 (321)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEECH-HH-HHHHHHH---TCSE-E--EETTTSCHHHH-------CCSCE
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEecc-ch-HHHHHHc---CCCE-E--EeCCCcchhhh-------hccCC
Confidence 58999999999999999999999999999988754 33 3333333 4332 2 25444432222 22579
Q ss_pred cEEEEcCC
Q 025672 91 DILVNAAA 98 (249)
Q Consensus 91 d~vi~~ag 98 (249)
|++|.+.|
T Consensus 217 D~v~d~~g 224 (321)
T 3tqh_A 217 DAVIDLVG 224 (321)
T ss_dssp EEEEESSC
T ss_pred CEEEECCC
Confidence 99999998
|
| >3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis} | Back alignment and structure |
|---|
Probab=96.97 E-value=0.011 Score=48.82 Aligned_cols=117 Identities=14% Similarity=0.112 Sum_probs=72.2
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhc----CCCeeEEEccCCCHHHHHHHHHHHHH
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSL----GIPAIGLEGDVRKREDAVRVVESTIN 85 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~----~~~~~~~~~Dl~~~~~~~~~~~~~~~ 85 (249)
+.+.+.|+|+ |.+|.+++..|+..|. +|+++|+++++++....++.+. +....+... .|. +
T Consensus 4 ~~~kI~iiGa-G~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t--~d~-----------~ 69 (321)
T 3p7m_A 4 ARKKITLVGA-GNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGT--NDY-----------K 69 (321)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE--SCG-----------G
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEc--CCH-----------H
Confidence 3467889995 9999999999999988 9999999998877666666542 112222211 121 1
Q ss_pred HhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccc
Q 025672 86 HFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL 158 (249)
Q Consensus 86 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~ 158 (249)
.+..-|+||..+|... ++ ..+. .+.+..|+.-...+ .+.+.+..+ .+.++++|...
T Consensus 70 a~~~aDvVIi~ag~p~-k~--G~~R---~dl~~~N~~i~~~i----~~~i~~~~p-------~a~vivvtNPv 125 (321)
T 3p7m_A 70 DLENSDVVIVTAGVPR-KP--GMSR---DDLLGINIKVMQTV----GEGIKHNCP-------NAFVICITNPL 125 (321)
T ss_dssp GGTTCSEEEECCSCCC-CT--TCCH---HHHHHHHHHHHHHH----HHHHHHHCT-------TCEEEECCSSH
T ss_pred HHCCCCEEEEcCCcCC-CC--CCCH---HHHHHHhHHHHHHH----HHHHHHHCC-------CcEEEEecCch
Confidence 2346799999998532 11 1233 33455565544444 444444332 36677776544
|
| >1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A | Back alignment and structure |
|---|
Probab=96.97 E-value=0.0011 Score=55.77 Aligned_cols=83 Identities=13% Similarity=0.205 Sum_probs=49.6
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCc
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 90 (249)
.|.++||+|++|++|...+..+...|++++.+.++.++.++..+.+...|.... + |-.+ ...+. +.++....+.+
T Consensus 167 ~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~v-i--~~~~-~~~~~-~~~~~~~~~~~ 241 (357)
T 1zsy_A 167 PGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAEHV-I--TEEE-LRRPE-MKNFFKDMPQP 241 (357)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSCHHHHHHHHHHTTCSEE-E--EHHH-HHSGG-GGGTTSSSCCC
T ss_pred CCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccchHHHHHHHHhcCCcEE-E--ecCc-chHHH-HHHHHhCCCCc
Confidence 589999999999999998888888899988776654433322333334454322 2 2111 11111 11111111258
Q ss_pred cEEEEcCC
Q 025672 91 DILVNAAA 98 (249)
Q Consensus 91 d~vi~~ag 98 (249)
|++|.+.|
T Consensus 242 Dvvid~~g 249 (357)
T 1zsy_A 242 RLALNCVG 249 (357)
T ss_dssp SEEEESSC
T ss_pred eEEEECCC
Confidence 99999988
|
| >4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A | Back alignment and structure |
|---|
Probab=96.96 E-value=0.0041 Score=55.50 Aligned_cols=89 Identities=19% Similarity=0.183 Sum_probs=57.6
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCC-eEEEEeCCc-------------------chHHHHHHHHHhcCCCeeE--E
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRK-------------------TVLRSAVAALHSLGIPAIG--L 66 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~-~v~l~~r~~-------------------~~~~~~~~~~~~~~~~~~~--~ 66 (249)
.+++++|+|.|++ |+|..+++.|+..|. ++.++|.+. .+.+.+++.+...+..+.+ +
T Consensus 323 kL~~arVLIVGaG-GLGs~vA~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~dIG~~KAeaaa~~L~~iNP~V~v~~~ 401 (615)
T 4gsl_A 323 IIKNTKVLLLGAG-TLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGV 401 (615)
T ss_dssp HHHTCEEEEECCS-HHHHHHHHHHHHTTCCEEEEECCCBCCTTGGGTSTTCCGGGTTSBHHHHHHHHHHHHCTTCEEEEE
T ss_pred HHhCCeEEEECCC-HHHHHHHHHHHHcCCCEEEEEcCCCCcccCcccccCCChhhcChHHHHHHHHHHHhhCCCcEEEEe
Confidence 3678999999875 999999999999998 799998854 4566777777766655444 4
Q ss_pred EccC-------CCHHHHHHHHHHHHHHhCCccEEEEcCC
Q 025672 67 EGDV-------RKREDAVRVVESTINHFGKLDILVNAAA 98 (249)
Q Consensus 67 ~~Dl-------~~~~~~~~~~~~~~~~~~~id~vi~~ag 98 (249)
..++ ++++...--.+.+.+.+...|+||.+..
T Consensus 402 ~~~Ipm~gh~v~~e~~~~l~~~~l~~ll~~~DlVvd~tD 440 (615)
T 4gsl_A 402 KLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVD 440 (615)
T ss_dssp CCCCCCTTCCCSCHHHHHHHHHHHHHHHHHCSEEEECCS
T ss_pred eccccccCccccchhhhcCCHHHHHHHhhcCCEEEecCC
Confidence 3333 2221111001112222345799998765
|
| >1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1 | Back alignment and structure |
|---|
Probab=96.94 E-value=0.0016 Score=54.84 Aligned_cols=47 Identities=21% Similarity=0.304 Sum_probs=42.1
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHH
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAAL 56 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~ 56 (249)
+++||+++|+|. |.+|..+|+.|.+.|++|++.+++.++++++.+++
T Consensus 170 ~L~GktV~V~G~-G~VG~~~A~~L~~~GakVvv~D~~~~~l~~~a~~~ 216 (364)
T 1leh_A 170 SLEGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEE 216 (364)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH
T ss_pred CCCcCEEEEECc-hHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHc
Confidence 689999999987 78999999999999999999999988877777665
|
| >3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=96.94 E-value=0.0028 Score=54.22 Aligned_cols=78 Identities=21% Similarity=0.244 Sum_probs=53.8
Q ss_pred CCCcEEEEecCCCchhHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh-
Q 025672 10 LKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF- 87 (249)
Q Consensus 10 l~~k~~lItGa~~giG~~~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~- 87 (249)
-.|.++||+|+ |++|...+..+...|+ +|+.+++++++++.+ +++ |... + .|-.+.+-. +++.+..
T Consensus 212 ~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~-~~l---Ga~~-v--i~~~~~~~~----~~i~~~t~ 279 (404)
T 3ip1_A 212 RPGDNVVILGG-GPIGLAAVAILKHAGASKVILSEPSEVRRNLA-KEL---GADH-V--IDPTKENFV----EAVLDYTN 279 (404)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHHH-HHH---TCSE-E--ECTTTSCHH----HHHHHHTT
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHc---CCCE-E--EcCCCCCHH----HHHHHHhC
Confidence 35899999998 8999999888888999 899999888776543 334 4332 2 254443322 2333322
Q ss_pred C-CccEEEEcCCC
Q 025672 88 G-KLDILVNAAAG 99 (249)
Q Consensus 88 ~-~id~vi~~ag~ 99 (249)
+ .+|++|.+.|.
T Consensus 280 g~g~D~vid~~g~ 292 (404)
T 3ip1_A 280 GLGAKLFLEATGV 292 (404)
T ss_dssp TCCCSEEEECSSC
T ss_pred CCCCCEEEECCCC
Confidence 2 69999999983
|
| >3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae} | Back alignment and structure |
|---|
Probab=96.88 E-value=0.0024 Score=55.51 Aligned_cols=79 Identities=15% Similarity=0.179 Sum_probs=55.3
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
+++++|.++|.|. |+.|.++|+.|.++|++|.+.|++........+.+...|..+ ....-. ++ .+
T Consensus 5 ~~~~~k~v~viG~-G~sG~s~A~~l~~~G~~V~~~D~~~~~~~~~~~~L~~~gi~~--~~g~~~--~~----------~~ 69 (451)
T 3lk7_A 5 TTFENKKVLVLGL-ARSGEAAARLLAKLGAIVTVNDGKPFDENPTAQSLLEEGIKV--VCGSHP--LE----------LL 69 (451)
T ss_dssp CTTTTCEEEEECC-TTTHHHHHHHHHHTTCEEEEEESSCGGGCHHHHHHHHTTCEE--EESCCC--GG----------GG
T ss_pred hhcCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEeCCcccCChHHHHHHhCCCEE--EECCCh--HH----------hh
Confidence 4578999999999 789999999999999999999987643333445565555433 222211 11 11
Q ss_pred CC-ccEEEEcCCCCC
Q 025672 88 GK-LDILVNAAAGNF 101 (249)
Q Consensus 88 ~~-id~vi~~ag~~~ 101 (249)
.. .|.||.++|+..
T Consensus 70 ~~~~d~vv~spgi~~ 84 (451)
T 3lk7_A 70 DEDFCYMIKNPGIPY 84 (451)
T ss_dssp GSCEEEEEECTTSCT
T ss_pred cCCCCEEEECCcCCC
Confidence 23 899999999754
|
| >3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A | Back alignment and structure |
|---|
Probab=96.82 E-value=0.002 Score=54.08 Aligned_cols=79 Identities=20% Similarity=0.256 Sum_probs=55.1
Q ss_pred CCCcEEEEecCCCchhHHHHHHHHHcCC-eEEEEeCCc-------------------chHHHHHHHHHhcCC--CeeEEE
Q 025672 10 LKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRK-------------------TVLRSAVAALHSLGI--PAIGLE 67 (249)
Q Consensus 10 l~~k~~lItGa~~giG~~~a~~l~~~G~-~v~l~~r~~-------------------~~~~~~~~~~~~~~~--~~~~~~ 67 (249)
+++++|+|.|+ ||+|.++++.|+..|. ++.++|++. .+.+.+++.+...+. ++..+.
T Consensus 116 L~~~~VlvvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~~ 194 (353)
T 3h5n_A 116 LKNAKVVILGC-GGIGNHVSVILATSGIGEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKRNSEISVSEIA 194 (353)
T ss_dssp HHTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEEE
T ss_pred HhCCeEEEECC-CHHHHHHHHHHHhCCCCeEEEECCCcCcccccccccCCChHHCCChHHHHHHHHHHHHCCCCeEEEee
Confidence 56789999987 6999999999999998 799998863 244556666655544 345566
Q ss_pred ccCCCHHHHHHHHHHHHHHhCCccEEEEcC
Q 025672 68 GDVRKREDAVRVVESTINHFGKLDILVNAA 97 (249)
Q Consensus 68 ~Dl~~~~~~~~~~~~~~~~~~~id~vi~~a 97 (249)
.+++...++. + +...|+||.+.
T Consensus 195 ~~i~~~~~~~-------~-~~~~DlVvd~~ 216 (353)
T 3h5n_A 195 LNINDYTDLH-------K-VPEADIWVVSA 216 (353)
T ss_dssp CCCCSGGGGG-------G-SCCCSEEEECC
T ss_pred cccCchhhhh-------H-hccCCEEEEec
Confidence 6666554222 1 34677877755
|
| >4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=96.81 E-value=0.002 Score=56.15 Aligned_cols=74 Identities=15% Similarity=0.166 Sum_probs=58.0
Q ss_pred cEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCccE
Q 025672 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI 92 (249)
Q Consensus 13 k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ 92 (249)
..++|.|+ |.+|+.+|+.|.++|++|++++++++.++.+.+++ .+.++..|-++++-++++=- ..-|.
T Consensus 4 M~iiI~G~-G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~-----~~~~i~Gd~~~~~~L~~Agi------~~ad~ 71 (461)
T 4g65_A 4 MKIIILGA-GQVGGTLAENLVGENNDITIVDKDGDRLRELQDKY-----DLRVVNGHASHPDVLHEAGA------QDADM 71 (461)
T ss_dssp EEEEEECC-SHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHS-----SCEEEESCTTCHHHHHHHTT------TTCSE
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhc-----CcEEEEEcCCCHHHHHhcCC------CcCCE
Confidence 45777776 58999999999999999999999998888776655 36678889988888776621 35677
Q ss_pred EEEcCC
Q 025672 93 LVNAAA 98 (249)
Q Consensus 93 vi~~ag 98 (249)
+|...+
T Consensus 72 ~ia~t~ 77 (461)
T 4g65_A 72 LVAVTN 77 (461)
T ss_dssp EEECCS
T ss_pred EEEEcC
Confidence 776554
|
| >2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A* | Back alignment and structure |
|---|
Probab=96.80 E-value=0.064 Score=43.70 Aligned_cols=114 Identities=11% Similarity=0.074 Sum_probs=73.1
Q ss_pred EEEEecCCCchhHHHHHHHHHcCC--eEEEEeCCcchHHHHHHHHHhc----CCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 14 VALLTGGGSGIGFEISLQLGKHGA--AIAIMGRRKTVLRSAVAALHSL----GIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 14 ~~lItGa~~giG~~~a~~l~~~G~--~v~l~~r~~~~~~~~~~~~~~~----~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
.+.|+|+ |+||..+|..|+.++. +++|+|.+++..+..+.++.+. +........+ |.+ .+
T Consensus 2 KV~IiGa-G~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~~~~~~~~i~~~~--d~~-----------~~ 67 (294)
T 2x0j_A 2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGA--DYS-----------LL 67 (294)
T ss_dssp EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHGGGTCCCEEEEES--CGG-----------GG
T ss_pred EEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhcccccCCCCCeEecCC--CHH-----------Hh
Confidence 4778895 9999999999999885 7999999987777666666542 2223333221 222 23
Q ss_pred CCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccc
Q 025672 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL 158 (249)
Q Consensus 88 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~ 158 (249)
..-|+||..||.... | ..+.+ +.++.|.. +++.+.+.+.+..+ .+.++.+|...
T Consensus 68 ~~aDvVvitAG~prk-p--GmtR~---dLl~~Na~----I~~~i~~~i~~~~p-------~aivlvvsNPv 121 (294)
T 2x0j_A 68 KGSEIIVVTAGLARK-P--GMTRL---DLAHKNAG----IIKDIAKKIVENAP-------ESKILVVTNPM 121 (294)
T ss_dssp TTCSEEEECCCCCCC-S--SSCHH---HHHHHHHH----HHHHHHHHHHTTST-------TCEEEECSSSH
T ss_pred CCCCEEEEecCCCCC-C--CCchH---HHHHHHHH----HHHHHHHHHHhcCC-------ceEEEEecCcc
Confidence 457999999996432 1 23444 44666654 55555666655543 36677777654
|
| >3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A* | Back alignment and structure |
|---|
Probab=96.79 E-value=0.0039 Score=53.50 Aligned_cols=61 Identities=11% Similarity=0.128 Sum_probs=45.3
Q ss_pred CcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHH
Q 025672 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRV 79 (249)
Q Consensus 12 ~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~ 79 (249)
+..++|.|. |.+|+.+++.|.+.|..|++++++++..+.+.+ . .+.++.+|.++++.++++
T Consensus 4 ~~~viIiG~-Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~----~--g~~vi~GDat~~~~L~~a 64 (413)
T 3l9w_A 4 GMRVIIAGF-GRFGQITGRLLLSSGVKMVVLDHDPDHIETLRK----F--GMKVFYGDATRMDLLESA 64 (413)
T ss_dssp CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHH----T--TCCCEESCTTCHHHHHHT
T ss_pred CCeEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHh----C--CCeEEEcCCCCHHHHHhc
Confidence 345888886 789999999999999999999999887665542 2 234555666666655443
|
| >3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A* | Back alignment and structure |
|---|
Probab=96.78 E-value=0.038 Score=45.44 Aligned_cols=116 Identities=12% Similarity=0.095 Sum_probs=70.1
Q ss_pred EEEEecCCCchhHHHHHHHHHc-C--CeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCc
Q 025672 14 VALLTGGGSGIGFEISLQLGKH-G--AAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (249)
Q Consensus 14 ~~lItGa~~giG~~~a~~l~~~-G--~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 90 (249)
.+.|+||+|.+|..++..|..+ + .+++++|.++ ..+....++.+....+.+...--++. .+.+...
T Consensus 2 KV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~-~~~G~a~Dl~~~~~~~~v~~~~~~~~----------~~~~~~a 70 (312)
T 3hhp_A 2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHIPTAVKIKGFSGEDA----------TPALEGA 70 (312)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSST-THHHHHHHHHTSCSSEEEEEECSSCC----------HHHHTTC
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCC-CchhHHHHhhCCCCCceEEEecCCCc----------HHHhCCC
Confidence 5789999999999999999886 5 3799999987 45555555654322222221100111 1223468
Q ss_pred cEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccc
Q 025672 91 DILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISAT 157 (249)
Q Consensus 91 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~ 157 (249)
|++|..+|... ++ ..+. .+.++.|..-...+.+.+.++ .+ .+.++++|..
T Consensus 71 Divii~ag~~r-kp--G~~R---~dll~~N~~I~~~i~~~i~~~----~p-------~a~vlvvtNP 120 (312)
T 3hhp_A 71 DVVLISAGVAR-KP--GMDR---SDLFNVNAGIVKNLVQQVAKT----CP-------KACIGIITNP 120 (312)
T ss_dssp SEEEECCSCSC-CT--TCCH---HHHHHHHHHHHHHHHHHHHHH----CT-------TSEEEECSSC
T ss_pred CEEEEeCCCCC-CC--CCCH---HHHHHHHHHHHHHHHHHHHHH----CC-------CcEEEEecCc
Confidence 99999998532 21 2233 455667765555555444433 22 3667777654
|
| >1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A* | Back alignment and structure |
|---|
Probab=96.78 E-value=0.0028 Score=52.75 Aligned_cols=74 Identities=11% Similarity=0.058 Sum_probs=51.6
Q ss_pred CcEEEEecCCCchhHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhc----C--CCeeEEEccCCCHHHHHHHHHHHH
Q 025672 12 GKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSL----G--IPAIGLEGDVRKREDAVRVVESTI 84 (249)
Q Consensus 12 ~k~~lItGa~~giG~~~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~----~--~~~~~~~~Dl~~~~~~~~~~~~~~ 84 (249)
.+++.|+|+ |.+|..++..|+..|. +|++++++++.++.....+.+. . .++... +|. +..+
T Consensus 9 ~~kI~VIGa-G~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t----~d~---~ea~---- 76 (331)
T 1pzg_A 9 RKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAE----YSY---EAAL---- 76 (331)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEE----CSH---HHHH----
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEEe----CCH---HHHh----
Confidence 357899998 9999999999999998 9999999998877744444321 1 122211 222 2222
Q ss_pred HHhCCccEEEEcCCCC
Q 025672 85 NHFGKLDILVNAAAGN 100 (249)
Q Consensus 85 ~~~~~id~vi~~ag~~ 100 (249)
..-|+||..+|..
T Consensus 77 ---~~aDiVi~a~g~p 89 (331)
T 1pzg_A 77 ---TGADCVIVTAGLT 89 (331)
T ss_dssp ---TTCSEEEECCSCS
T ss_pred ---CCCCEEEEccCCC
Confidence 3579999999864
|
| >1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A* | Back alignment and structure |
|---|
Probab=96.78 E-value=0.0011 Score=54.72 Aligned_cols=83 Identities=11% Similarity=0.102 Sum_probs=56.3
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCee-EEEccCCCHHHHHHHHHHHHHH
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAI-GLEGDVRKREDAVRVVESTINH 86 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~~~~~ 86 (249)
.++++++++|.|++.=+|+.+|+.|+..|++|++++|+..++....+++. ...+ ...+..++++++.+.+.+
T Consensus 173 ~~l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~ra~~la---~~~~~~t~~~~t~~~~L~e~l~~---- 245 (320)
T 1edz_A 173 NRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLK---LNKHHVEDLGEYSEDLLKKCSLD---- 245 (320)
T ss_dssp CTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSS---CCCCEEEEEEECCHHHHHHHHHH----
T ss_pred CCCCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHhHHHHHh---hhcccccccccccHhHHHHHhcc----
Confidence 37899999999998888999999999999999999987443222111111 1111 111112445667666653
Q ss_pred hCCccEEEEcCCCC
Q 025672 87 FGKLDILVNAAAGN 100 (249)
Q Consensus 87 ~~~id~vi~~ag~~ 100 (249)
-|+||.+.|..
T Consensus 246 ---ADIVIsAtg~p 256 (320)
T 1edz_A 246 ---SDVVITGVPSE 256 (320)
T ss_dssp ---CSEEEECCCCT
T ss_pred ---CCEEEECCCCC
Confidence 69999998853
|
| >3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP} | Back alignment and structure |
|---|
Probab=96.76 E-value=0.0058 Score=49.57 Aligned_cols=42 Identities=14% Similarity=0.188 Sum_probs=37.2
Q ss_pred cEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHH
Q 025672 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVA 54 (249)
Q Consensus 13 k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~ 54 (249)
+++.|+|++|.+|..++..|.+.|++|++++|+.+..+.+.+
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~~ 53 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQG 53 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHh
Confidence 479999999999999999999999999999999877766543
|
| >1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=96.75 E-value=0.035 Score=45.83 Aligned_cols=115 Identities=15% Similarity=0.215 Sum_probs=71.1
Q ss_pred cEEEEecCCCchhHHHHHHHHHcCC--eEEEEeCCcchHHHHHHHHHhcC---CCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 13 KVALLTGGGSGIGFEISLQLGKHGA--AIAIMGRRKTVLRSAVAALHSLG---IPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 13 k~~lItGa~~giG~~~a~~l~~~G~--~v~l~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
..+.|+|+ |.+|..++..|+..+. +|+++|+++++++....++.+.. ..+.+. .| + .+.+
T Consensus 6 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~-~~--~-----------~~a~ 70 (318)
T 1ez4_A 6 QKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIY-SG--E-----------YSDC 70 (318)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEE-EC--C-----------GGGG
T ss_pred CEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEE-EC--C-----------HHHh
Confidence 57999998 9999999999999886 79999999888887777775431 222222 22 1 1224
Q ss_pred CCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccc
Q 025672 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH 159 (249)
Q Consensus 88 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~ 159 (249)
..-|+||..+|.... + ..+ -.+.+..|+- +++.+.+.+.+..+ .+.|+++|....
T Consensus 71 ~~aDvVii~ag~~~~-~--g~~---R~dl~~~n~~----i~~~i~~~i~~~~p-------~a~iiv~tNPv~ 125 (318)
T 1ez4_A 71 KDADLVVITAGAPQK-P--GES---RLDLVNKNLN----ILSSIVKPVVDSGF-------DGIFLVAANPVD 125 (318)
T ss_dssp TTCSEEEECCCC----------------CHHHHHH----HHHHHHHHHHHTTC-------CSEEEECSSSHH
T ss_pred CCCCEEEECCCCCCC-C--CCC---HHHHHHHHHH----HHHHHHHHHHHhCC-------CeEEEEeCCcHH
Confidence 568999999986421 1 111 1223444443 44555555555433 377888766543
|
| >2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=96.68 E-value=0.0094 Score=50.74 Aligned_cols=78 Identities=15% Similarity=0.179 Sum_probs=52.7
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhC-
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG- 88 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~- 88 (249)
.|.++||+|+ |+||...+..+...|+ +|+.+++++++++.+. +.|. .++ |..+.+-+.+.+.++. .+
T Consensus 185 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~----~lGa--~~i--~~~~~~~~~~~~~~~~--~g~ 253 (398)
T 2dph_A 185 PGSHVYIAGA-GPVGRCAAAGARLLGAACVIVGDQNPERLKLLS----DAGF--ETI--DLRNSAPLRDQIDQIL--GKP 253 (398)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHH----TTTC--EEE--ETTSSSCHHHHHHHHH--SSS
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH----HcCC--cEE--cCCCcchHHHHHHHHh--CCC
Confidence 5889999996 9999998888888899 8999999887765432 3344 333 5544322122222211 12
Q ss_pred CccEEEEcCCC
Q 025672 89 KLDILVNAAAG 99 (249)
Q Consensus 89 ~id~vi~~ag~ 99 (249)
.+|++|.+.|.
T Consensus 254 g~Dvvid~~g~ 264 (398)
T 2dph_A 254 EVDCGVDAVGF 264 (398)
T ss_dssp CEEEEEECSCT
T ss_pred CCCEEEECCCC
Confidence 69999999985
|
| >3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=96.68 E-value=0.019 Score=46.40 Aligned_cols=84 Identities=18% Similarity=0.142 Sum_probs=60.0
Q ss_pred CcEEEEecCCCchhHHHHHHHHHcCC---eEEEEeCCcchHHHHHHHHH----------hcCCCeeEEEccCCCHHHHHH
Q 025672 12 GKVALLTGGGSGIGFEISLQLGKHGA---AIAIMGRRKTVLRSAVAALH----------SLGIPAIGLEGDVRKREDAVR 78 (249)
Q Consensus 12 ~k~~lItGa~~giG~~~a~~l~~~G~---~v~l~~r~~~~~~~~~~~~~----------~~~~~~~~~~~Dl~~~~~~~~ 78 (249)
.+++.|+|+ |.+|.+++..|++.|+ +|++++|++++.+.+.++.. -.+..+.++.+ .+..++.
T Consensus 3 ~~~I~iIG~-G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~gi~~~~~~~~~~~~aDvVilav---~p~~~~~ 78 (280)
T 3tri_A 3 TSNITFIGG-GNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKCGVHTTQDNRQGALNADVVVLAV---KPHQIKM 78 (280)
T ss_dssp CSCEEEESC-SHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTTCCEEESCHHHHHSSCSEEEECS---CGGGHHH
T ss_pred CCEEEEEcc-cHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHcCCEEeCChHHHHhcCCeEEEEe---CHHHHHH
Confidence 456888887 7999999999999998 89999999988887766421 01234444433 4567788
Q ss_pred HHHHHHHH-hCCccEEEEcCCC
Q 025672 79 VVESTINH-FGKLDILVNAAAG 99 (249)
Q Consensus 79 ~~~~~~~~-~~~id~vi~~ag~ 99 (249)
+++++... +.+=.+||++++.
T Consensus 79 vl~~l~~~~l~~~~iiiS~~ag 100 (280)
T 3tri_A 79 VCEELKDILSETKILVISLAVG 100 (280)
T ss_dssp HHHHHHHHHHTTTCEEEECCTT
T ss_pred HHHHHHhhccCCCeEEEEecCC
Confidence 88887765 5432378887653
|
| >3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A | Back alignment and structure |
|---|
Probab=96.67 E-value=0.0057 Score=54.49 Aligned_cols=56 Identities=27% Similarity=0.275 Sum_probs=43.7
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCC-eEEEEeCC-------------------cchHHHHHHHHHhcCCCeeE
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRR-------------------KTVLRSAVAALHSLGIPAIG 65 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~-~v~l~~r~-------------------~~~~~~~~~~~~~~~~~~~~ 65 (249)
.+++++|+|.|++ |+|..+++.|+..|. ++.++|.+ ..+.+.+++.+...+..+.+
T Consensus 324 kL~~~kVLIVGaG-GLGs~va~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~DvG~~KAeaaa~~L~~iNP~v~v 399 (598)
T 3vh1_A 324 IIKNTKVLLLGAG-TLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDA 399 (598)
T ss_dssp HHHTCEEEEECCS-HHHHHHHHHHHTTTCCEEEEECCSBCCTTSTTTSTTCCSTTCSSBHHHHHHHHHHHHCTTCEE
T ss_pred HHhCCeEEEECCC-HHHHHHHHHHHHcCCCEEEEECCCcccccccccccccchhhcCcHHHHHHHHHHHhHCCCcEE
Confidence 4678899999865 999999999999998 79999764 24667778888766555443
|
| >2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A* | Back alignment and structure |
|---|
Probab=96.67 E-value=0.024 Score=46.94 Aligned_cols=117 Identities=14% Similarity=0.152 Sum_probs=72.5
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCC--eEEEEeCCcchHHHHHHHHHhcC---CCeeEEEccCCCHHHHHHHHHHHHH
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGA--AIAIMGRRKTVLRSAVAALHSLG---IPAIGLEGDVRKREDAVRVVESTIN 85 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~--~v~l~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dl~~~~~~~~~~~~~~~ 85 (249)
+...+.|+|+ |.+|..++..|+..+. +|+++|.++++++....++.+.. ..+.+. .| +. +
T Consensus 8 ~~~KI~IiGa-G~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~-~~--~~-----------~ 72 (326)
T 2zqz_A 8 DHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIY-SA--EY-----------S 72 (326)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEE-EC--CG-----------G
T ss_pred CCCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEE-EC--CH-----------H
Confidence 4468999998 9999999999999886 79999999888887777665421 222222 22 21 1
Q ss_pred HhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccc
Q 025672 86 HFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH 159 (249)
Q Consensus 86 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~ 159 (249)
.+..-|+||..+|.... + ..+.. ..+..|+-- ++.+.+.+.+..+ .+.|+++|....
T Consensus 73 a~~~aDvVii~ag~~~k-~--g~~R~---dl~~~n~~i----~~~i~~~i~~~~p-------~a~iiv~tNPv~ 129 (326)
T 2zqz_A 73 DAKDADLVVITAGAPQK-P--GETRL---DLVNKNLKI----LKSIVDPIVDSGF-------NGIFLVAANPVD 129 (326)
T ss_dssp GGGGCSEEEECCCCC--------CHH---HHHHHHHHH----HHHHHHHHHHHTC-------CSEEEECSSSHH
T ss_pred HhCCCCEEEEcCCCCCC-C--CCCHH---HHHHHHHHH----HHHHHHHHHHHCC-------CeEEEEeCCcHH
Confidence 23457999999986421 1 12222 334555443 4444444444332 377888766543
|
| >3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=96.67 E-value=0.0099 Score=47.54 Aligned_cols=89 Identities=10% Similarity=0.137 Sum_probs=58.9
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCCe-EEEEeCCcchHHHHHHHHH--------hcCCCeeEEEccCCCHHHHHHHHH
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGAA-IAIMGRRKTVLRSAVAALH--------SLGIPAIGLEGDVRKREDAVRVVE 81 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~~-v~l~~r~~~~~~~~~~~~~--------~~~~~~~~~~~Dl~~~~~~~~~~~ 81 (249)
.+.++.|.|+ |.+|..++..|.+.|++ |.+++|+.+..+.+.+.+. +.-....++-.-+. ...+..+++
T Consensus 9 ~~m~i~iiG~-G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~Dvvi~av~-~~~~~~v~~ 86 (266)
T 3d1l_A 9 EDTPIVLIGA-GNLATNLAKALYRKGFRIVQVYSRTEESARELAQKVEAEYTTDLAEVNPYAKLYIVSLK-DSAFAELLQ 86 (266)
T ss_dssp GGCCEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTTCEEESCGGGSCSCCSEEEECCC-HHHHHHHHH
T ss_pred CCCeEEEEcC-CHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCceeCCHHHHhcCCCEEEEecC-HHHHHHHHH
Confidence 3457889986 89999999999999998 8899999888877766531 10012223322333 345677777
Q ss_pred HHHHHhCCccEEEEcCCCCC
Q 025672 82 STINHFGKLDILVNAAAGNF 101 (249)
Q Consensus 82 ~~~~~~~~id~vi~~ag~~~ 101 (249)
++.+...+=.+||++.+...
T Consensus 87 ~l~~~~~~~~ivv~~s~~~~ 106 (266)
T 3d1l_A 87 GIVEGKREEALMVHTAGSIP 106 (266)
T ss_dssp HHHTTCCTTCEEEECCTTSC
T ss_pred HHHhhcCCCcEEEECCCCCc
Confidence 77654433356777766443
|
| >3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A* | Back alignment and structure |
|---|
Probab=96.66 E-value=0.033 Score=45.95 Aligned_cols=116 Identities=14% Similarity=0.184 Sum_probs=70.8
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCC--eEEEEeCCcchHHHHHHHHHhc----CCCeeEEEccCCCHHHHHHHHHHHH
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGA--AIAIMGRRKTVLRSAVAALHSL----GIPAIGLEGDVRKREDAVRVVESTI 84 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~--~v~l~~r~~~~~~~~~~~~~~~----~~~~~~~~~Dl~~~~~~~~~~~~~~ 84 (249)
+...+.|+|+ |.+|..++..|+.+|. +|+++|.++++++....++.+. +..+.+. .| +.
T Consensus 5 ~~~KI~IIGa-G~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~-~~--~~----------- 69 (317)
T 3d0o_A 5 KGNKVVLIGN-GAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVK-AG--EY----------- 69 (317)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEE-EC--CG-----------
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEE-eC--CH-----------
Confidence 4568899998 9999999999999985 7999999987776555554331 1222222 22 21
Q ss_pred HHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccc
Q 025672 85 NHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL 158 (249)
Q Consensus 85 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~ 158 (249)
+.+..-|+||..+|.... + ..+.. ..+..|.- +++.+.+.+.+..+ ++.|+++|...
T Consensus 70 ~a~~~aDvVvi~ag~~~~-~--g~~r~---dl~~~n~~----i~~~i~~~i~~~~p-------~a~viv~tNPv 126 (317)
T 3d0o_A 70 SDCHDADLVVICAGAAQK-P--GETRL---DLVSKNLK----IFKSIVGEVMASKF-------DGIFLVATNPV 126 (317)
T ss_dssp GGGTTCSEEEECCCCCCC-T--TCCHH---HHHHHHHH----HHHHHHHHHHHTTC-------CSEEEECSSSH
T ss_pred HHhCCCCEEEECCCCCCC-C--CCcHH---HHHHHHHH----HHHHHHHHHHHhCC-------CcEEEEecCcH
Confidence 223468999999986432 1 12222 33445544 34444555544432 36677766544
|
| >3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp} | Back alignment and structure |
|---|
Probab=96.66 E-value=0.0027 Score=51.32 Aligned_cols=39 Identities=23% Similarity=0.315 Sum_probs=35.9
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCc
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK 46 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~ 46 (249)
.+++||+++|+|.++-+|+.++..|..+|++|+++.++.
T Consensus 156 i~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t 194 (285)
T 3p2o_A 156 IDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKT 194 (285)
T ss_dssp CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCc
Confidence 468999999999999999999999999999999998754
|
| >1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=96.65 E-value=0.0051 Score=52.35 Aligned_cols=80 Identities=16% Similarity=0.183 Sum_probs=53.4
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCC
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK 89 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 89 (249)
.|.++||+|+ |++|...+..+...|+ +|+.+++++++++.+. + .|.. . +|.++.+++.+.+.+... ...
T Consensus 185 ~g~~VlV~Ga-G~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~-~---lGa~--~--i~~~~~~~~~~~v~~~t~-g~g 254 (398)
T 1kol_A 185 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHAK-A---QGFE--I--ADLSLDTPLHEQIAALLG-EPE 254 (398)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-H---TTCE--E--EETTSSSCHHHHHHHHHS-SSC
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHH-H---cCCc--E--EccCCcchHHHHHHHHhC-CCC
Confidence 5889999995 9999998888888999 6888998887766543 2 3442 2 355543323222222211 126
Q ss_pred ccEEEEcCCCC
Q 025672 90 LDILVNAAAGN 100 (249)
Q Consensus 90 id~vi~~ag~~ 100 (249)
+|++|.+.|..
T Consensus 255 ~Dvvid~~G~~ 265 (398)
T 1kol_A 255 VDCAVDAVGFE 265 (398)
T ss_dssp EEEEEECCCTT
T ss_pred CCEEEECCCCc
Confidence 99999999853
|
| >3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens} | Back alignment and structure |
|---|
Probab=96.65 E-value=0.0064 Score=49.32 Aligned_cols=85 Identities=14% Similarity=0.061 Sum_probs=58.7
Q ss_pred cEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHH-------HHhcCCCeeEEEccCCCHHHHHHHH---HH
Q 025672 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAA-------LHSLGIPAIGLEGDVRKREDAVRVV---ES 82 (249)
Q Consensus 13 k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~-------~~~~~~~~~~~~~Dl~~~~~~~~~~---~~ 82 (249)
+++.|.|. |.+|..++..|++.|++|++.+|++++.+.+.+. +.+.-....++-.-+.+...++.++ ++
T Consensus 2 ~~i~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~~~~~ 80 (287)
T 3pef_A 2 QKFGFIGL-GIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAALGAERAATPCEVVESCPVTFAMLADPAAAEEVCFGKHG 80 (287)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTC
T ss_pred CEEEEEee-cHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeecCCHHHHHhcCCEEEEEcCCHHHHHHHHcCcch
Confidence 46788875 7999999999999999999999999887766532 0000001234445566677788877 66
Q ss_pred HHHHhCCccEEEEcCC
Q 025672 83 TINHFGKLDILVNAAA 98 (249)
Q Consensus 83 ~~~~~~~id~vi~~ag 98 (249)
+.+...+=.+||+..+
T Consensus 81 l~~~l~~~~~vi~~st 96 (287)
T 3pef_A 81 VLEGIGEGRGYVDMST 96 (287)
T ss_dssp HHHHCCTTCEEEECSC
T ss_pred HhhcCCCCCEEEeCCC
Confidence 6665544456777654
|
| >1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=96.64 E-value=0.0066 Score=51.15 Aligned_cols=76 Identities=14% Similarity=0.209 Sum_probs=51.5
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh-C
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF-G 88 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~ 88 (249)
.|.++||+|+ |+||...+..+...|+ +|+.+++++++++.+ +++ |... ++ |..+.+-.+ ++.+.. +
T Consensus 190 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a-~~l---Ga~~-vi--~~~~~~~~~----~~~~~~~g 257 (371)
T 1f8f_A 190 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELA-KQL---GATH-VI--NSKTQDPVA----AIKEITDG 257 (371)
T ss_dssp TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHH-HHH---TCSE-EE--ETTTSCHHH----HHHHHTTS
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHH-HHc---CCCE-Ee--cCCccCHHH----HHHHhcCC
Confidence 5789999995 8999999888888999 699999988776554 333 3322 22 444332222 222222 3
Q ss_pred CccEEEEcCC
Q 025672 89 KLDILVNAAA 98 (249)
Q Consensus 89 ~id~vi~~ag 98 (249)
.+|++|.++|
T Consensus 258 g~D~vid~~g 267 (371)
T 1f8f_A 258 GVNFALESTG 267 (371)
T ss_dssp CEEEEEECSC
T ss_pred CCcEEEECCC
Confidence 7999999998
|
| >3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=96.60 E-value=0.00078 Score=57.61 Aligned_cols=47 Identities=19% Similarity=0.256 Sum_probs=38.5
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEE-EEeC----------CcchHHHHHHH
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIA-IMGR----------RKTVLRSAVAA 55 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~-l~~r----------~~~~~~~~~~~ 55 (249)
.++++|+++|+| .|.+|..+++.|.+.|++|+ +.|+ +.+.+.+.+++
T Consensus 214 ~~l~gk~vaVqG-~GnVG~~~a~~L~~~GakVVavsD~~G~i~dp~Gld~~~l~~~~~~ 271 (419)
T 3aoe_E 214 LDLRGARVVVQG-LGQVGAAVALHAERLGMRVVAVATSMGGMYAPEGLDVAEVLSAYEA 271 (419)
T ss_dssp CCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEEETTEEEECTTCCCHHHHHHHHHH
T ss_pred CCccCCEEEEEC-cCHHHHHHHHHHHHCCCEEEEEEcCCCeEECCCCCCHHHHHHHHHh
Confidence 368899999998 78999999999999999988 7777 55555555554
|
| >3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber} | Back alignment and structure |
|---|
Probab=96.60 E-value=0.057 Score=44.42 Aligned_cols=114 Identities=10% Similarity=0.167 Sum_probs=70.1
Q ss_pred EEEEecCCCchhHHHHHHHHHcCC--eEEEEeCCcchHHHHHHHHHhc----CCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 14 VALLTGGGSGIGFEISLQLGKHGA--AIAIMGRRKTVLRSAVAALHSL----GIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 14 ~~lItGa~~giG~~~a~~l~~~G~--~v~l~~r~~~~~~~~~~~~~~~----~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
.+.|+|+ |.+|..++..|+..|. +|+++|+++++++....++.+. +....+...| +. +.+
T Consensus 2 kv~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~~--~~-----------~a~ 67 (314)
T 3nep_X 2 KVTVIGA-GNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGTN--DY-----------GPT 67 (314)
T ss_dssp EEEEECC-SHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEES--SS-----------GGG
T ss_pred EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEECC--CH-----------HHh
Confidence 4789996 9999999999999997 8999999998877655555432 1222222122 11 234
Q ss_pred CCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccc
Q 025672 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL 158 (249)
Q Consensus 88 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~ 158 (249)
..-|++|.++|.... + ..+. .+.++.|+. +++.+.+.+.+..+ .+.++++|...
T Consensus 68 ~~aDvVii~ag~~~k-p--G~~R---~dl~~~N~~----i~~~i~~~i~~~~p-------~a~vivvtNPv 121 (314)
T 3nep_X 68 EDSDVCIITAGLPRS-P--GMSR---DDLLAKNTE----IVGGVTEQFVEGSP-------DSTIIVVANPL 121 (314)
T ss_dssp TTCSEEEECCCC----------C---HHHHHHHHH----HHHHHHHHHHTTCT-------TCEEEECCSSH
T ss_pred CCCCEEEECCCCCCC-C--CCCH---HHHHHhhHH----HHHHHHHHHHHhCC-------CcEEEecCCch
Confidence 568999999986321 1 1122 344556654 45555555555432 37777777654
|
| >2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans} | Back alignment and structure |
|---|
Probab=96.59 E-value=0.014 Score=47.84 Aligned_cols=72 Identities=10% Similarity=0.139 Sum_probs=48.6
Q ss_pred EEEEecCCCchhHHHHHHHHHcCC--eEEEEeCCcchHHHHHHHHHhcCC---CeeEEEccCCCHHHHHHHHHHHHHHhC
Q 025672 14 VALLTGGGSGIGFEISLQLGKHGA--AIAIMGRRKTVLRSAVAALHSLGI---PAIGLEGDVRKREDAVRVVESTINHFG 88 (249)
Q Consensus 14 ~~lItGa~~giG~~~a~~l~~~G~--~v~l~~r~~~~~~~~~~~~~~~~~---~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 88 (249)
++.|+|+ |.+|..++..|+..|. +|+++|+++++++....++.+... ...+. . .+. +.+.
T Consensus 2 kI~VIGa-G~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~-~--~~~-----------~a~~ 66 (304)
T 2v6b_A 2 KVGVVGT-GFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVW-H--GGH-----------SELA 66 (304)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEE-E--ECG-----------GGGT
T ss_pred EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEE-E--CCH-----------HHhC
Confidence 5789998 9999999999999998 899999998777665555543211 11121 1 121 1234
Q ss_pred CccEEEEcCCCC
Q 025672 89 KLDILVNAAAGN 100 (249)
Q Consensus 89 ~id~vi~~ag~~ 100 (249)
.-|+||.+++..
T Consensus 67 ~aDvVIi~~~~~ 78 (304)
T 2v6b_A 67 DAQVVILTAGAN 78 (304)
T ss_dssp TCSEEEECC---
T ss_pred CCCEEEEcCCCC
Confidence 689999999753
|
| >1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=96.58 E-value=0.018 Score=47.52 Aligned_cols=115 Identities=11% Similarity=0.116 Sum_probs=67.2
Q ss_pred CcEEEEecCCCchhHHHHHHHHHcCC--eEEEEeCCcchHHHHHHHHHhcCC---CeeEEEccCCCHHHHHHHHHHHHHH
Q 025672 12 GKVALLTGGGSGIGFEISLQLGKHGA--AIAIMGRRKTVLRSAVAALHSLGI---PAIGLEGDVRKREDAVRVVESTINH 86 (249)
Q Consensus 12 ~k~~lItGa~~giG~~~a~~l~~~G~--~v~l~~r~~~~~~~~~~~~~~~~~---~~~~~~~Dl~~~~~~~~~~~~~~~~ 86 (249)
...+.|+|+ |.+|..++..|+..|. +|+++|.++++++....++.+... .+.+. . .+ .+.
T Consensus 7 ~~KI~IiGa-G~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~-~--~~-----------~~a 71 (318)
T 1y6j_A 7 RSKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLY-A--GD-----------YSD 71 (318)
T ss_dssp CCCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC-----C-----------GGG
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEE-E--CC-----------HHH
Confidence 356899998 9999999999999987 899999998877766666644211 12111 1 11 122
Q ss_pred hCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccc
Q 025672 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL 158 (249)
Q Consensus 87 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~ 158 (249)
+..-|+||.++|.... + ..+. .+.+..|+--...+++.+.++ .+ ++.|+++|...
T Consensus 72 ~~~aDvVii~~g~p~k-~--g~~r---~dl~~~n~~i~~~i~~~i~~~----~p-------~a~viv~tNPv 126 (318)
T 1y6j_A 72 VKDCDVIVVTAGANRK-P--GETR---LDLAKKNVMIAKEVTQNIMKY----YN-------HGVILVVSNPV 126 (318)
T ss_dssp GTTCSEEEECCCC---------CH---HHHHHHHHHHHHHHHHHHHHH----CC-------SCEEEECSSSH
T ss_pred hCCCCEEEEcCCCCCC-C--CcCH---HHHHHhhHHHHHHHHHHHHHh----CC-------CcEEEEecCcH
Confidence 4568999999986321 1 1122 334566665555555555444 22 26677765443
|
| >3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A | Back alignment and structure |
|---|
Probab=96.54 E-value=0.0036 Score=52.36 Aligned_cols=77 Identities=21% Similarity=0.217 Sum_probs=52.0
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh-C
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF-G 88 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~ 88 (249)
.|.++||+|+ |+||...+..+...|+ +|+.+++++++++.+ +++ |... + .|..+.+-. +++.+.. +
T Consensus 166 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~-~~l---Ga~~-v--i~~~~~~~~----~~v~~~t~g 233 (352)
T 3fpc_A 166 LGDTVCVIGI-GPVGLMSVAGANHLGAGRIFAVGSRKHCCDIA-LEY---GATD-I--INYKNGDIV----EQILKATDG 233 (352)
T ss_dssp TTCCEEEECC-SHHHHHHHHHHHTTTCSSEEEECCCHHHHHHH-HHH---TCCE-E--ECGGGSCHH----HHHHHHTTT
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHH-HHh---CCce-E--EcCCCcCHH----HHHHHHcCC
Confidence 4889999985 8999999888888999 799999887765533 334 3322 2 244333222 2333322 2
Q ss_pred -CccEEEEcCCC
Q 025672 89 -KLDILVNAAAG 99 (249)
Q Consensus 89 -~id~vi~~ag~ 99 (249)
.+|++|.+.|.
T Consensus 234 ~g~D~v~d~~g~ 245 (352)
T 3fpc_A 234 KGVDKVVIAGGD 245 (352)
T ss_dssp CCEEEEEECSSC
T ss_pred CCCCEEEECCCC
Confidence 69999999884
|
| >4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=96.53 E-value=0.011 Score=48.76 Aligned_cols=87 Identities=13% Similarity=0.109 Sum_probs=60.0
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHH-------HHhcCCCeeEEEccCCCHHHHHHHHH--
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAA-------LHSLGIPAIGLEGDVRKREDAVRVVE-- 81 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~-------~~~~~~~~~~~~~Dl~~~~~~~~~~~-- 81 (249)
..+++.|.|. |.+|..++..|++.|++|++++|++++.+++.+. +.+.-....++-.-+.+...++.++.
T Consensus 30 ~~~~I~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~~~~~e~~~~aDvVi~~vp~~~~~~~v~~~~ 108 (320)
T 4dll_A 30 YARKITFLGT-GSMGLPMARRLCEAGYALQVWNRTPARAASLAALGATIHEQARAAARDADIVVSMLENGAVVQDVLFAQ 108 (320)
T ss_dssp CCSEEEEECC-TTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCEEESSHHHHHTTCSEEEECCSSHHHHHHHHTTT
T ss_pred CCCEEEEECc-cHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCCCEeeCCHHHHHhcCCEEEEECCCHHHHHHHHcch
Confidence 3467888865 7999999999999999999999998877765432 11100123344456667777887776
Q ss_pred HHHHHhCCccEEEEcCC
Q 025672 82 STINHFGKLDILVNAAA 98 (249)
Q Consensus 82 ~~~~~~~~id~vi~~ag 98 (249)
.+.+...+-.+||+...
T Consensus 109 ~~~~~l~~~~~vi~~st 125 (320)
T 4dll_A 109 GVAAAMKPGSLFLDMAS 125 (320)
T ss_dssp CHHHHCCTTCEEEECSC
T ss_pred hHHhhCCCCCEEEecCC
Confidence 56555555567777655
|
| >3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A | Back alignment and structure |
|---|
Probab=96.52 E-value=0.0056 Score=49.21 Aligned_cols=37 Identities=8% Similarity=0.176 Sum_probs=34.4
Q ss_pred CCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCc
Q 025672 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK 46 (249)
Q Consensus 10 l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~ 46 (249)
++||+++|.|.++-+|+.++..|..+|++|+++.++.
T Consensus 148 l~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~t 184 (276)
T 3ngx_A 148 YHENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSKT 184 (276)
T ss_dssp CCSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC
T ss_pred cCCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCCc
Confidence 7899999999999999999999999999999998653
|
| >1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A* | Back alignment and structure |
|---|
Probab=96.51 E-value=0.017 Score=45.88 Aligned_cols=77 Identities=9% Similarity=0.023 Sum_probs=56.3
Q ss_pred EEEEecCCCchhHHHHHHHHHc-CCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCccE
Q 025672 14 VALLTGGGSGIGFEISLQLGKH-GAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI 92 (249)
Q Consensus 14 ~~lItGa~~giG~~~a~~l~~~-G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ 92 (249)
++.|+|++|.+|+.+++.+.+. |++|+.+..+.+.++.+.. .+.. +.+|++.++.+...+..+.+. ++++
T Consensus 2 kV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~dl~~~~~----~~~D---vvIDfT~p~a~~~~~~~a~~~--g~~~ 72 (245)
T 1p9l_A 2 RVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDPLSLLTD----GNTE---VVIDFTHPDVVMGNLEFLIDN--GIHA 72 (245)
T ss_dssp EEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCCTHHHHH----TTCC---EEEECSCTTTHHHHHHHHHHT--TCEE
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCCHHHHhc----cCCc---EEEEccChHHHHHHHHHHHHc--CCCE
Confidence 5899999999999999999876 8887754433344443322 1222 556999999998888877664 5889
Q ss_pred EEEcCCC
Q 025672 93 LVNAAAG 99 (249)
Q Consensus 93 vi~~ag~ 99 (249)
|+-..|.
T Consensus 73 VigTTG~ 79 (245)
T 1p9l_A 73 VVGTTGF 79 (245)
T ss_dssp EECCCCC
T ss_pred EEcCCCC
Confidence 9988873
|
| >1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A | Back alignment and structure |
|---|
Probab=96.51 E-value=0.0039 Score=51.88 Aligned_cols=72 Identities=11% Similarity=0.087 Sum_probs=55.4
Q ss_pred CcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCcc
Q 025672 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD 91 (249)
Q Consensus 12 ~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 91 (249)
.+.++|.|+ |.+|+.+++.|.++|. |++++++++..+ +.+ ..+.++.+|.+|++.++++ .....|
T Consensus 115 ~~~viI~G~-G~~g~~l~~~L~~~g~-v~vid~~~~~~~-~~~------~~~~~i~gd~~~~~~L~~a------~i~~a~ 179 (336)
T 1lnq_A 115 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKK-VLR------SGANFVHGDPTRVSDLEKA------NVRGAR 179 (336)
T ss_dssp -CEEEEESC-CHHHHHHHTTGGGSCE-EEEESCGGGHHH-HHH------TTCEEEESCTTSHHHHHHT------CSTTEE
T ss_pred cCCEEEECC-cHHHHHHHHHHHhCCc-EEEEeCChhhhh-HHh------CCcEEEEeCCCCHHHHHhc------Chhhcc
Confidence 457899996 8999999999999999 999999988766 332 2577899999999887765 113567
Q ss_pred EEEEcCC
Q 025672 92 ILVNAAA 98 (249)
Q Consensus 92 ~vi~~ag 98 (249)
.+|...+
T Consensus 180 ~vi~~~~ 186 (336)
T 1lnq_A 180 AVIVDLE 186 (336)
T ss_dssp EEEECCS
T ss_pred EEEEcCC
Confidence 7776554
|
| >2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1} | Back alignment and structure |
|---|
Probab=96.49 E-value=0.018 Score=44.38 Aligned_cols=77 Identities=10% Similarity=0.112 Sum_probs=52.2
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
..++.+++.|.| .|.+|.+++..|.+.|++|++++|+++ ......+.++.+ . ...++.+++++....
T Consensus 15 ~~~~~~~I~iiG-~G~mG~~la~~l~~~g~~V~~~~~~~~---------~~~~aD~vi~av--~-~~~~~~v~~~l~~~~ 81 (209)
T 2raf_A 15 LYFQGMEITIFG-KGNMGQAIGHNFEIAGHEVTYYGSKDQ---------ATTLGEIVIMAV--P-YPALAALAKQYATQL 81 (209)
T ss_dssp -----CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECTTCC---------CSSCCSEEEECS--C-HHHHHHHHHHTHHHH
T ss_pred cccCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEcCCHH---------HhccCCEEEEcC--C-cHHHHHHHHHHHHhc
Confidence 346778899999 689999999999999999999999876 112334444433 3 667788888776555
Q ss_pred CCccEEEEcCC
Q 025672 88 GKLDILVNAAA 98 (249)
Q Consensus 88 ~~id~vi~~ag 98 (249)
. =.++|+...
T Consensus 82 ~-~~~vi~~~~ 91 (209)
T 2raf_A 82 K-GKIVVDITN 91 (209)
T ss_dssp T-TSEEEECCC
T ss_pred C-CCEEEEECC
Confidence 4 345666544
|
| >1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A* | Back alignment and structure |
|---|
Probab=96.49 E-value=0.00045 Score=57.90 Aligned_cols=39 Identities=18% Similarity=0.268 Sum_probs=35.0
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcch
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTV 48 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~ 48 (249)
+++||++.|.| .|.||+.+++.|.+.|++|++.|++..+
T Consensus 172 ~L~GktV~I~G-~GnVG~~~A~~l~~~GakVvvsD~~~~~ 210 (355)
T 1c1d_A 172 SLDGLTVLVQG-LGAVGGSLASLAAEAGAQLLVADTDTER 210 (355)
T ss_dssp CSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred CCCCCEEEEEC-cCHHHHHHHHHHHHCCCEEEEEeCCccH
Confidence 68999999997 5899999999999999999998887654
|
| >2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A | Back alignment and structure |
|---|
Probab=96.49 E-value=0.046 Score=44.91 Aligned_cols=115 Identities=8% Similarity=0.095 Sum_probs=71.8
Q ss_pred cEEEEecCCCchhHHHHHHHHHcC--CeEEEEeCCcchHHHHHHHHHhcC---CCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 13 KVALLTGGGSGIGFEISLQLGKHG--AAIAIMGRRKTVLRSAVAALHSLG---IPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 13 k~~lItGa~~giG~~~a~~l~~~G--~~v~l~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
+++.|+|+ |.+|..++..|+..+ .+|+++|.++++++....++.+.. ..+.+. .| +.+ .+
T Consensus 1 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~~~~~~~~v~-~~--~~~-----------a~ 65 (310)
T 2xxj_A 1 MKVGIVGS-GMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATPFAHPVWVW-AG--SYG-----------DL 65 (310)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTGGGSCCCEEE-EC--CGG-----------GG
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhHhhcCCeEEE-EC--CHH-----------Hh
Confidence 35889998 999999999999987 479999999888887677775421 122322 22 222 23
Q ss_pred CCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccc
Q 025672 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH 159 (249)
Q Consensus 88 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~ 159 (249)
..-|+||..+|.... + ..+.. ..+..|.-- ++.+.+.+.+..+ .+.|+++|....
T Consensus 66 ~~aD~Vii~ag~~~~-~--g~~r~---dl~~~n~~i----~~~i~~~i~~~~p-------~a~iiv~tNPv~ 120 (310)
T 2xxj_A 66 EGARAVVLAAGVAQR-P--GETRL---QLLDRNAQV----FAQVVPRVLEAAP-------EAVLLVATNPVD 120 (310)
T ss_dssp TTEEEEEECCCCCCC-T--TCCHH---HHHHHHHHH----HHHHHHHHHHHCT-------TCEEEECSSSHH
T ss_pred CCCCEEEECCCCCCC-C--CcCHH---HHHHhhHHH----HHHHHHHHHHHCC-------CcEEEEecCchH
Confidence 468999999986432 1 22333 334555443 4444444444332 377888766543
|
| >4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=96.48 E-value=0.0028 Score=49.46 Aligned_cols=53 Identities=13% Similarity=0.079 Sum_probs=41.4
Q ss_pred CCCCCCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEE-EeCCcchHHHHHHHH
Q 025672 3 SPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAI-MGRRKTVLRSAVAAL 56 (249)
Q Consensus 3 ~~~~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l-~~r~~~~~~~~~~~~ 56 (249)
++.+...++-+++.|+| .|.+|.+++..|.+.|++|++ .+|++++.+++.++.
T Consensus 14 ~~~~~~~m~mmkI~IIG-~G~mG~~la~~l~~~g~~V~~v~~r~~~~~~~l~~~~ 67 (220)
T 4huj_A 14 GTENLYFQSMTTYAIIG-AGAIGSALAERFTAAQIPAIIANSRGPASLSSVTDRF 67 (220)
T ss_dssp ---CTTGGGSCCEEEEE-CHHHHHHHHHHHHHTTCCEEEECTTCGGGGHHHHHHH
T ss_pred cccchhhhcCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEECCCHHHHHHHHHHh
Confidence 34444444446789999 789999999999999999998 999999888877665
|
| >3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A* | Back alignment and structure |
|---|
Probab=96.48 E-value=0.017 Score=48.02 Aligned_cols=76 Identities=16% Similarity=0.137 Sum_probs=50.7
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHc-CCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh--
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKH-GAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF-- 87 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~-G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-- 87 (249)
.|.+++|+|+ |++|...+..+... |++|+.+++++++++.+. +.|... ++ |-.+ +.. +++.+..
T Consensus 171 ~g~~vlv~Ga-G~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~----~lGa~~-~i--~~~~-~~~----~~v~~~t~g 237 (345)
T 3jv7_A 171 PGSTAVVIGV-GGLGHVGIQILRAVSAARVIAVDLDDDRLALAR----EVGADA-AV--KSGA-GAA----DAIRELTGG 237 (345)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHH----HTTCSE-EE--ECST-THH----HHHHHHHGG
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH----HcCCCE-EE--cCCC-cHH----HHHHHHhCC
Confidence 5889999998 99999888777667 779999999887766443 234432 22 3222 222 2232222
Q ss_pred CCccEEEEcCCC
Q 025672 88 GKLDILVNAAAG 99 (249)
Q Consensus 88 ~~id~vi~~ag~ 99 (249)
..+|+++.+.|.
T Consensus 238 ~g~d~v~d~~G~ 249 (345)
T 3jv7_A 238 QGATAVFDFVGA 249 (345)
T ss_dssp GCEEEEEESSCC
T ss_pred CCCeEEEECCCC
Confidence 279999999983
|
| >2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=96.48 E-value=0.0061 Score=49.87 Aligned_cols=74 Identities=18% Similarity=0.321 Sum_probs=52.8
Q ss_pred CCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHH
Q 025672 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (249)
Q Consensus 7 ~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 86 (249)
...+++++++|.|+ |+||+++++.|...|++|++++|+.++.+.+.+ .+. ..+. .+++++++
T Consensus 152 ~~~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~----~g~--~~~~-----~~~l~~~l------ 213 (300)
T 2rir_A 152 DYTIHGSQVAVLGL-GRTGMTIARTFAALGANVKVGARSSAHLARITE----MGL--VPFH-----TDELKEHV------ 213 (300)
T ss_dssp SSCSTTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----TTC--EEEE-----GGGHHHHS------
T ss_pred CCCCCCCEEEEEcc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH----CCC--eEEc-----hhhHHHHh------
Confidence 34688999999996 899999999999999999999998765544322 232 2221 12333332
Q ss_pred hCCccEEEEcCCC
Q 025672 87 FGKLDILVNAAAG 99 (249)
Q Consensus 87 ~~~id~vi~~ag~ 99 (249)
...|+||++...
T Consensus 214 -~~aDvVi~~~p~ 225 (300)
T 2rir_A 214 -KDIDICINTIPS 225 (300)
T ss_dssp -TTCSEEEECCSS
T ss_pred -hCCCEEEECCCh
Confidence 468999998773
|
| >2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A | Back alignment and structure |
|---|
Probab=96.47 E-value=0.0019 Score=52.22 Aligned_cols=45 Identities=24% Similarity=0.268 Sum_probs=38.9
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHH
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVA 54 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~ 54 (249)
.+++++++|.|+ |++|++++..|.+.|++|++++|+.++.+++.+
T Consensus 126 ~~~~~~v~iiGa-G~~g~aia~~L~~~g~~V~v~~r~~~~~~~l~~ 170 (275)
T 2hk9_A 126 EVKEKSILVLGA-GGASRAVIYALVKEGAKVFLWNRTKEKAIKLAQ 170 (275)
T ss_dssp TGGGSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSHHHHHHHTT
T ss_pred CcCCCEEEEECc-hHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHH
Confidence 567899999996 799999999999999999999999877665543
|
| >3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis} | Back alignment and structure |
|---|
Probab=96.45 E-value=0.0036 Score=51.50 Aligned_cols=68 Identities=15% Similarity=0.146 Sum_probs=47.6
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCc
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 90 (249)
.|.++||+|+ |++|...+..+...|++|+.++ ++++.+.+. ++ |.. .++ | |. +++ .+.+
T Consensus 142 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~-~~~~~~~~~-~l---Ga~-~v~--~--d~---~~v-------~~g~ 200 (315)
T 3goh_A 142 KQREVLIVGF-GAVNNLLTQMLNNAGYVVDLVS-ASLSQALAA-KR---GVR-HLY--R--EP---SQV-------TQKY 200 (315)
T ss_dssp SCCEEEEECC-SHHHHHHHHHHHHHTCEEEEEC-SSCCHHHHH-HH---TEE-EEE--S--SG---GGC-------CSCE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEE-ChhhHHHHH-Hc---CCC-EEE--c--CH---HHh-------CCCc
Confidence 5899999999 9999999988888999999999 777766543 34 322 222 3 21 111 3579
Q ss_pred cEEEEcCCC
Q 025672 91 DILVNAAAG 99 (249)
Q Consensus 91 d~vi~~ag~ 99 (249)
|+++.+.|.
T Consensus 201 Dvv~d~~g~ 209 (315)
T 3goh_A 201 FAIFDAVNS 209 (315)
T ss_dssp EEEECC---
T ss_pred cEEEECCCc
Confidence 999999884
|
| >1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A* | Back alignment and structure |
|---|
Probab=96.42 E-value=0.0035 Score=51.89 Aligned_cols=74 Identities=15% Similarity=0.121 Sum_probs=49.7
Q ss_pred EEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCccEE
Q 025672 14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDIL 93 (249)
Q Consensus 14 ~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~v 93 (249)
++||+|++|++|..++..+...|++|+.+++++++++.+. ++ |... ++ |..+.+ ...+.++ ..+.+|++
T Consensus 153 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~-~l---Ga~~-v~--~~~~~~--~~~~~~~--~~~~~d~v 221 (330)
T 1tt7_A 153 SVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLK-QL---GASE-VI--SREDVY--DGTLKAL--SKQQWQGA 221 (330)
T ss_dssp CEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHH-HH---TCSE-EE--EHHHHC--SSCCCSS--CCCCEEEE
T ss_pred eEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc---CCcE-EE--ECCCch--HHHHHHh--hcCCccEE
Confidence 7999999999999999998899999999999988766553 33 3322 22 322110 0111111 11369999
Q ss_pred EEcCC
Q 025672 94 VNAAA 98 (249)
Q Consensus 94 i~~ag 98 (249)
|.++|
T Consensus 222 id~~g 226 (330)
T 1tt7_A 222 VDPVG 226 (330)
T ss_dssp EESCC
T ss_pred EECCc
Confidence 99998
|
| >4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1} | Back alignment and structure |
|---|
Probab=96.42 E-value=0.006 Score=49.30 Aligned_cols=40 Identities=23% Similarity=0.296 Sum_probs=36.1
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcc
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT 47 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~ 47 (249)
.+++||.++|.|.++-+|+.++..|...|++|+++.++..
T Consensus 157 i~l~Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~T~ 196 (286)
T 4a5o_A 157 ADLYGMDAVVVGASNIVGRPMALELLLGGCTVTVTHRFTR 196 (286)
T ss_dssp CCCTTCEEEEECTTSTTHHHHHHHHHHTTCEEEEECTTCS
T ss_pred CCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCCc
Confidence 4689999999999988999999999999999999987543
|
| >1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A* | Back alignment and structure |
|---|
Probab=96.41 E-value=0.044 Score=44.97 Aligned_cols=74 Identities=14% Similarity=0.111 Sum_probs=51.2
Q ss_pred cEEEEecCCCchhHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhc----CCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 13 KVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSL----GIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 13 k~~lItGa~~giG~~~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~----~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
+++.|+|+ |.+|..++..|+..|. +|+++|+++++++....++.+. .....+... +|.+ .+
T Consensus 3 ~kI~VIGa-G~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t--~d~~-----------a~ 68 (309)
T 1ur5_A 3 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGT--NNYA-----------DT 68 (309)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE--SCGG-----------GG
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEEC--CCHH-----------HH
Confidence 46899998 9999999999999996 8999999988887655555431 111111110 2211 13
Q ss_pred CCccEEEEcCCCC
Q 025672 88 GKLDILVNAAAGN 100 (249)
Q Consensus 88 ~~id~vi~~ag~~ 100 (249)
..-|+||.++|..
T Consensus 69 ~~aD~Vi~a~g~p 81 (309)
T 1ur5_A 69 ANSDVIVVTSGAP 81 (309)
T ss_dssp TTCSEEEECCCC-
T ss_pred CCCCEEEEcCCCC
Confidence 4679999999864
|
| >1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A* | Back alignment and structure |
|---|
Probab=96.40 E-value=0.048 Score=44.44 Aligned_cols=39 Identities=18% Similarity=0.354 Sum_probs=34.8
Q ss_pred cEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHH
Q 025672 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSA 52 (249)
Q Consensus 13 k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~ 52 (249)
+++.|.|+ |.+|..+|..|++.|++|++++|+++.++..
T Consensus 16 ~~I~VIG~-G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~ 54 (302)
T 1f0y_A 16 KHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKS 54 (302)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHH
Confidence 56889988 7999999999999999999999998877654
|
| >4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens} | Back alignment and structure |
|---|
Probab=96.39 E-value=0.024 Score=47.64 Aligned_cols=89 Identities=9% Similarity=0.040 Sum_probs=55.7
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHH----------HHhcCCCeeEEEccCCCHHHHH
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAA----------LHSLGIPAIGLEGDVRKREDAV 77 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~----------~~~~~~~~~~~~~Dl~~~~~~~ 77 (249)
.+++.+++.|+| .|-+|..++..|++.|++|++.+|+.++.+.+.+. +-..-.+..++-.=+.+. .++
T Consensus 18 ~Mm~~mkIgiIG-lG~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~a~~~DvVi~~vp~~-~v~ 95 (358)
T 4e21_A 18 LYFQSMQIGMIG-LGRMGADMVRRLRKGGHECVVYDLNVNAVQALEREGIAGARSIEEFCAKLVKPRVVWLMVPAA-VVD 95 (358)
T ss_dssp ----CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCBCCSSHHHHHHHSCSSCEEEECSCGG-GHH
T ss_pred hhhcCCEEEEEC-chHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCCCEEeCCHHHHHhcCCCCCEEEEeCCHH-HHH
Confidence 345678899998 68999999999999999999999998876654321 101000112232333443 666
Q ss_pred HHHHHHHHHhCCccEEEEcCC
Q 025672 78 RVVESTINHFGKLDILVNAAA 98 (249)
Q Consensus 78 ~~~~~~~~~~~~id~vi~~ag 98 (249)
.+++.+.....+=++||.+..
T Consensus 96 ~vl~~l~~~l~~g~iiId~st 116 (358)
T 4e21_A 96 SMLQRMTPLLAANDIVIDGGN 116 (358)
T ss_dssp HHHHHHGGGCCTTCEEEECSS
T ss_pred HHHHHHHhhCCCCCEEEeCCC
Confidence 777666555544466776655
|
| >2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A* | Back alignment and structure |
|---|
Probab=96.38 E-value=0.0054 Score=49.18 Aligned_cols=70 Identities=23% Similarity=0.281 Sum_probs=52.5
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
.++++ +++|.|+ |++|++++..|.+.|++|++++|+.++.+++.+++. .. ..+.++ +
T Consensus 113 ~~l~~-~v~iiG~-G~~g~~~a~~l~~~g~~v~v~~r~~~~~~~l~~~~~---~~-------~~~~~~---~-------- 169 (263)
T 2d5c_A 113 IPLKG-PALVLGA-GGAGRAVAFALREAGLEVWVWNRTPQRALALAEEFG---LR-------AVPLEK---A-------- 169 (263)
T ss_dssp CCCCS-CEEEECC-SHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHT---CE-------ECCGGG---G--------
T ss_pred CCCCC-eEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc---cc-------hhhHhh---c--------
Confidence 35778 9999996 789999999999999999999999887777776653 11 112211 1
Q ss_pred CCccEEEEcCCCC
Q 025672 88 GKLDILVNAAAGN 100 (249)
Q Consensus 88 ~~id~vi~~ag~~ 100 (249)
...|+||++....
T Consensus 170 ~~~Divi~~tp~~ 182 (263)
T 2d5c_A 170 REARLLVNATRVG 182 (263)
T ss_dssp GGCSEEEECSSTT
T ss_pred cCCCEEEEccCCC
Confidence 2479999988754
|
| >3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=96.36 E-value=0.0068 Score=49.44 Aligned_cols=72 Identities=15% Similarity=0.310 Sum_probs=51.4
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
..+++++++|.|. |+||+.+++.|...|++|++++|+.++.+... ..+. .++ + .++++++ +
T Consensus 151 ~~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~~----~~g~--~~~--~---~~~l~~~-------l 211 (293)
T 3d4o_A 151 FTIHGANVAVLGL-GRVGMSVARKFAALGAKVKVGARESDLLARIA----EMGM--EPF--H---ISKAAQE-------L 211 (293)
T ss_dssp SCSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH----HTTS--EEE--E---GGGHHHH-------T
T ss_pred CCCCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH----HCCC--eec--C---hhhHHHH-------h
Confidence 4678999999995 79999999999999999999999876544332 2232 222 1 1233333 2
Q ss_pred CCccEEEEcCC
Q 025672 88 GKLDILVNAAA 98 (249)
Q Consensus 88 ~~id~vi~~ag 98 (249)
...|+|+++..
T Consensus 212 ~~aDvVi~~~p 222 (293)
T 3d4o_A 212 RDVDVCINTIP 222 (293)
T ss_dssp TTCSEEEECCS
T ss_pred cCCCEEEECCC
Confidence 46899999874
|
| >1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=96.34 E-value=0.025 Score=46.69 Aligned_cols=72 Identities=15% Similarity=0.072 Sum_probs=50.4
Q ss_pred EEEEecCCCchhHHHHHHHHHcCC--eEEEEeCCcchHHHHHHHHHhc---CCCeeEEEccCCCHHHHHHHHHHHHHHhC
Q 025672 14 VALLTGGGSGIGFEISLQLGKHGA--AIAIMGRRKTVLRSAVAALHSL---GIPAIGLEGDVRKREDAVRVVESTINHFG 88 (249)
Q Consensus 14 ~~lItGa~~giG~~~a~~l~~~G~--~v~l~~r~~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 88 (249)
++.|+|+ |.+|..++..|+..|. +|++++++++.++....++... .....+. . ++.+. +.
T Consensus 2 kI~VIGa-G~~G~~la~~l~~~g~~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~i~-~--~d~~~-----------~~ 66 (319)
T 1a5z_A 2 KIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIY-A--GDYAD-----------LK 66 (319)
T ss_dssp EEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEE-E--CCGGG-----------GT
T ss_pred EEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHHHHHhhhhhcCCcEEE-e--CCHHH-----------hC
Confidence 5789998 9999999999999998 9999999988777766554321 1111111 1 23221 23
Q ss_pred CccEEEEcCCCC
Q 025672 89 KLDILVNAAAGN 100 (249)
Q Consensus 89 ~id~vi~~ag~~ 100 (249)
..|+||.+++..
T Consensus 67 ~aDvViiav~~~ 78 (319)
T 1a5z_A 67 GSDVVIVAAGVP 78 (319)
T ss_dssp TCSEEEECCCCC
T ss_pred CCCEEEEccCCC
Confidence 679999998854
|
| >3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A* | Back alignment and structure |
|---|
Probab=96.32 E-value=0.0058 Score=50.41 Aligned_cols=73 Identities=18% Similarity=0.205 Sum_probs=50.4
Q ss_pred CcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCcc
Q 025672 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD 91 (249)
Q Consensus 12 ~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 91 (249)
++ +||+|++|++|...+..+...|++|+.+++++++.+.+.+ + |....+ |..+.+. +.++ ..+.+|
T Consensus 148 g~-VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~~-l---Ga~~vi---~~~~~~~----~~~~--~~~~~d 213 (324)
T 3nx4_A 148 GE-VVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYLKS-L---GANRIL---SRDEFAE----SRPL--EKQLWA 213 (324)
T ss_dssp CC-EEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHH-H---TCSEEE---EGGGSSC----CCSS--CCCCEE
T ss_pred Ce-EEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-c---CCCEEE---ecCCHHH----HHhh--cCCCcc
Confidence 45 9999999999999999998999999999999887766543 3 333222 2222211 1111 114789
Q ss_pred EEEEcCC
Q 025672 92 ILVNAAA 98 (249)
Q Consensus 92 ~vi~~ag 98 (249)
++|.+.|
T Consensus 214 ~v~d~~g 220 (324)
T 3nx4_A 214 GAIDTVG 220 (324)
T ss_dssp EEEESSC
T ss_pred EEEECCC
Confidence 9999887
|
| >1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A* | Back alignment and structure |
|---|
Probab=96.32 E-value=0.11 Score=42.66 Aligned_cols=75 Identities=15% Similarity=0.202 Sum_probs=52.0
Q ss_pred CcEEEEecCCCchhHHHHHHHHHcCC--eEEEEeCCcchHHHHHHHHHhcCC----CeeEEEccCCCHHHHHHHHHHHHH
Q 025672 12 GKVALLTGGGSGIGFEISLQLGKHGA--AIAIMGRRKTVLRSAVAALHSLGI----PAIGLEGDVRKREDAVRVVESTIN 85 (249)
Q Consensus 12 ~k~~lItGa~~giG~~~a~~l~~~G~--~v~l~~r~~~~~~~~~~~~~~~~~----~~~~~~~Dl~~~~~~~~~~~~~~~ 85 (249)
.+++.|+|+ |.+|..++..|+..|. +|+++|++++.++....++.+... .+.+.. | +. +
T Consensus 6 ~~kI~IIGa-G~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~~-~--~~-----------~ 70 (316)
T 1ldn_A 6 GARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWH-G--DY-----------D 70 (316)
T ss_dssp SCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEE-C--CG-----------G
T ss_pred CCEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHHhhhcCCCeEEEc-C--cH-----------H
Confidence 367899998 9999999999999885 799999998766655555543221 233321 1 21 1
Q ss_pred HhCCccEEEEcCCCCC
Q 025672 86 HFGKLDILVNAAAGNF 101 (249)
Q Consensus 86 ~~~~id~vi~~ag~~~ 101 (249)
.+..-|+||.++|...
T Consensus 71 al~~aDvViia~~~~~ 86 (316)
T 1ldn_A 71 DCRDADLVVICAGANQ 86 (316)
T ss_dssp GTTTCSEEEECCSCCC
T ss_pred HhCCCCEEEEcCCCCC
Confidence 2346899999998643
|
| >2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A | Back alignment and structure |
|---|
Probab=96.31 E-value=0.08 Score=43.53 Aligned_cols=40 Identities=15% Similarity=0.277 Sum_probs=35.4
Q ss_pred CcEEEEecCCCchhHHHHHHHHHcCC-eEEEEeCCcchHHHH
Q 025672 12 GKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSA 52 (249)
Q Consensus 12 ~k~~lItGa~~giG~~~a~~l~~~G~-~v~l~~r~~~~~~~~ 52 (249)
.+++.|+|+ |.+|..++..|+..|. +|++++++++.++..
T Consensus 4 ~~kI~VIGa-G~~G~~ia~~la~~g~~~V~l~D~~~~~~~~~ 44 (317)
T 2ewd_A 4 RRKIAVIGS-GQIGGNIAYIVGKDNLADVVLFDIAEGIPQGK 44 (317)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHH
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCchHHHHH
Confidence 357899998 8999999999999998 999999998877764
|
| >4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major} | Back alignment and structure |
|---|
Probab=96.30 E-value=0.0077 Score=49.03 Aligned_cols=40 Identities=23% Similarity=0.292 Sum_probs=36.0
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcc
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT 47 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~ 47 (249)
.+++||.++|.|.++-+|+.++..|...|++|+++.|+..
T Consensus 161 i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~T~ 200 (300)
T 4a26_A 161 IEMAGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSGTS 200 (300)
T ss_dssp CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTSC
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 4689999999999988999999999999999999987543
|
| >1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A* | Back alignment and structure |
|---|
Probab=96.27 E-value=0.077 Score=43.79 Aligned_cols=72 Identities=11% Similarity=0.123 Sum_probs=51.6
Q ss_pred cEEEEecCCCchhHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhc------CCCeeEEEccCCCHHHHHHHHHHHHH
Q 025672 13 KVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSL------GIPAIGLEGDVRKREDAVRVVESTIN 85 (249)
Q Consensus 13 k~~lItGa~~giG~~~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~------~~~~~~~~~Dl~~~~~~~~~~~~~~~ 85 (249)
+++.|+|+ |.+|..++..|+..|. +|+++|+++++++.....+... ..++... +|. +
T Consensus 5 ~kI~VIGa-G~vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t----~d~-----------~ 68 (322)
T 1t2d_A 5 AKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGS----NTY-----------D 68 (322)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEE----CCG-----------G
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEEC----CCH-----------H
Confidence 57899998 9999999999999998 8999999998887665555431 1122211 221 1
Q ss_pred HhCCccEEEEcCCCC
Q 025672 86 HFGKLDILVNAAAGN 100 (249)
Q Consensus 86 ~~~~id~vi~~ag~~ 100 (249)
.+..-|+||.++|..
T Consensus 69 al~~aD~Vi~a~g~p 83 (322)
T 1t2d_A 69 DLAGADVVIVTAGFT 83 (322)
T ss_dssp GGTTCSEEEECCSCS
T ss_pred HhCCCCEEEEeCCCC
Confidence 134679999999854
|
| >3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis} | Back alignment and structure |
|---|
Probab=96.27 E-value=0.0066 Score=49.06 Aligned_cols=39 Identities=21% Similarity=0.191 Sum_probs=35.3
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCc
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK 46 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~ 46 (249)
.+++||.++|.|.++-+|+.++..|..+|++|+++.++.
T Consensus 157 i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t 195 (285)
T 3l07_A 157 IKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFT 195 (285)
T ss_dssp CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC
T ss_pred CCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc
Confidence 468999999999998899999999999999999987653
|
| >4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A | Back alignment and structure |
|---|
Probab=96.26 E-value=0.021 Score=49.00 Aligned_cols=72 Identities=15% Similarity=0.205 Sum_probs=53.8
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
+.+.+|+++|.|++ -+|+.+++.+.+.|++|++++.+..... ..+. -..+..|..|.+.+.++++
T Consensus 31 ~~~~~~~IlIlG~G-~lg~~~~~aa~~lG~~v~v~d~~~~~p~---~~~a-----d~~~~~~~~d~~~l~~~a~------ 95 (419)
T 4e4t_A 31 PILPGAWLGMVGGG-QLGRMFCFAAQSMGYRVAVLDPDPASPA---GAVA-----DRHLRAAYDDEAALAELAG------ 95 (419)
T ss_dssp CCCTTCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSCTTCHH---HHHS-----SEEECCCTTCHHHHHHHHH------
T ss_pred cCCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEECCCCcCch---hhhC-----CEEEECCcCCHHHHHHHHh------
Confidence 45789999999864 7999999999999999999987654321 1111 1245578999988887773
Q ss_pred CCccEEEE
Q 025672 88 GKLDILVN 95 (249)
Q Consensus 88 ~~id~vi~ 95 (249)
++|+|+.
T Consensus 96 -~~D~V~~ 102 (419)
T 4e4t_A 96 -LCEAVST 102 (419)
T ss_dssp -HCSEEEE
T ss_pred -cCCEEEE
Confidence 4888884
|
| >2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=96.26 E-value=0.044 Score=44.96 Aligned_cols=113 Identities=13% Similarity=0.198 Sum_probs=68.9
Q ss_pred EEEecCCCchhHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhc----CCCeeEEEccCCCHHHHHHHHHHHHHHhCC
Q 025672 15 ALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSL----GIPAIGLEGDVRKREDAVRVVESTINHFGK 89 (249)
Q Consensus 15 ~lItGa~~giG~~~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~----~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 89 (249)
+.|+|+ |.+|..++..|+..|. +|++.|+++++++....++.+. +....+... +|.+ .+..
T Consensus 2 I~IiGa-G~vG~~~a~~l~~~~l~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t--~d~~-----------a~~~ 67 (308)
T 2d4a_B 2 ITILGA-GKVGMATAVMLMMRGYDDLLLIARTPGKPQGEALDLAHAAAELGVDIRISGS--NSYE-----------DMRG 67 (308)
T ss_dssp EEEECC-SHHHHHHHHHHHHHTCSCEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEE--SCGG-----------GGTT
T ss_pred EEEECc-CHHHHHHHHHHHhCCCCEEEEEcCChhhHHHHHHHHHHhhhhcCCCeEEEEC--CCHH-----------HhCC
Confidence 678998 9999999999999887 6999999988887666665432 222222221 1211 2346
Q ss_pred ccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccc
Q 025672 90 LDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL 158 (249)
Q Consensus 90 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~ 158 (249)
-|+||..+|.... + ..+.. ..+..|.- +.+.+.+.+.+..+ .+.++++|...
T Consensus 68 aD~Vi~~ag~~~k-~--G~~r~---dl~~~n~~----i~~~i~~~i~~~~p-------~a~iiv~tNPv 119 (308)
T 2d4a_B 68 SDIVLVTAGIGRK-P--GMTRE---QLLEANAN----TMADLAEKIKAYAK-------DAIVVITTNPV 119 (308)
T ss_dssp CSEEEECCSCCCC-S--SCCTH---HHHHHHHH----HHHHHHHHHHHHCT-------TCEEEECCSSH
T ss_pred CCEEEEeCCCCCC-C--CCcHH---HHHHHHHH----HHHHHHHHHHHHCC-------CeEEEEeCCch
Confidence 8999999886432 1 12332 22344433 45555555544332 36677776543
|
| >1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2 | Back alignment and structure |
|---|
Probab=96.25 E-value=0.0091 Score=48.28 Aligned_cols=40 Identities=20% Similarity=0.184 Sum_probs=36.2
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcc
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT 47 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~ 47 (249)
.+++||+++|.|++.-+|+.+++.|...|++|.++.++..
T Consensus 155 i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~ 194 (288)
T 1b0a_A 155 IDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTK 194 (288)
T ss_dssp CCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCS
T ss_pred CCCCCCEEEEECCChHHHHHHHHHHHHCCCeEEEEeCCch
Confidence 4689999999999988999999999999999999986653
|
| >1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A* | Back alignment and structure |
|---|
Probab=96.23 E-value=0.023 Score=45.82 Aligned_cols=86 Identities=13% Similarity=0.162 Sum_probs=54.9
Q ss_pred CCcEEEEecCCCchhHHHHHHHHH-cCCeEE-EEeCCcchH--HHHH-------------HHHHhcCCCeeEEEccCCCH
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGK-HGAAIA-IMGRRKTVL--RSAV-------------AALHSLGIPAIGLEGDVRKR 73 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~-~G~~v~-l~~r~~~~~--~~~~-------------~~~~~~~~~~~~~~~Dl~~~ 73 (249)
+..++.|+|++|.+|+.+++.+.+ .|++|+ +++++.+.. +.+. ..+...-..+ -+-+|++.+
T Consensus 4 ~~mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~~~~~~g~d~~~~~g~~~~~v~~~~dl~~~l~~~-DvVIDft~p 82 (273)
T 1dih_A 4 ANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVKDDF-DVFIDFTRP 82 (273)
T ss_dssp CBEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCSTTTTTSC-SEEEECSCH
T ss_pred CCcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCchhhhhhhHHHHcCCCcCCceecCCHHHHhcCC-CEEEEcCCh
Confidence 345799999999999999999885 466766 566654321 0000 0000000012 234599999
Q ss_pred HHHHHHHHHHHHHhCCccEEEEcCCC
Q 025672 74 EDAVRVVESTINHFGKLDILVNAAAG 99 (249)
Q Consensus 74 ~~~~~~~~~~~~~~~~id~vi~~ag~ 99 (249)
+.....+..+.+. .+++|+-..|.
T Consensus 83 ~~~~~~~~~a~~~--G~~vVigTtG~ 106 (273)
T 1dih_A 83 EGTLNHLAFCRQH--GKGMVIGTTGF 106 (273)
T ss_dssp HHHHHHHHHHHHT--TCEEEECCCCC
T ss_pred HHHHHHHHHHHhC--CCCEEEECCCC
Confidence 9888888877665 57788877763
|
| >3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A* | Back alignment and structure |
|---|
Probab=96.23 E-value=0.034 Score=47.06 Aligned_cols=75 Identities=21% Similarity=0.287 Sum_probs=53.4
Q ss_pred CCCCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHH
Q 025672 5 FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTI 84 (249)
Q Consensus 5 ~~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 84 (249)
|+.+.+.+|+++|.|+. .+|+.+++.+.+.|++|++++.+..... ....-..+..|..|.+.+.++++
T Consensus 7 m~~~~~~~k~IlIlG~G-~~g~~la~aa~~~G~~vi~~d~~~~~~~--------~~~ad~~~~~~~~d~~~l~~~~~--- 74 (389)
T 3q2o_A 7 MTRIILPGKTIGIIGGG-QLGRMMALAAKEMGYKIAVLDPTKNSPC--------AQVADIEIVASYDDLKAIQHLAE--- 74 (389)
T ss_dssp CCCCCCTTSEEEEECCS-HHHHHHHHHHHHTTCEEEEEESSTTCTT--------TTTCSEEEECCTTCHHHHHHHHH---
T ss_pred ccccCCCCCEEEEECCC-HHHHHHHHHHHHcCCEEEEEeCCCCCch--------HHhCCceEecCcCCHHHHHHHHH---
Confidence 55667899999999876 5999999999999999999987653210 00111345578888887777765
Q ss_pred HHhCCccEEEE
Q 025672 85 NHFGKLDILVN 95 (249)
Q Consensus 85 ~~~~~id~vi~ 95 (249)
..|++..
T Consensus 75 ----~~dvI~~ 81 (389)
T 3q2o_A 75 ----ISDVVTY 81 (389)
T ss_dssp ----TCSEEEE
T ss_pred ----hCCEeee
Confidence 3576643
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 249 | ||||
| d2ew8a1 | 247 | c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenas | 9e-54 | |
| d1xq1a_ | 259 | c.2.1.2 (A:) Tropinone reductase {Thale cress (Ara | 2e-50 | |
| d2d1ya1 | 248 | c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T | 6e-50 | |
| d1xg5a_ | 257 | c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC41 | 7e-50 | |
| d1spxa_ | 264 | c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nemato | 6e-48 | |
| d1hxha_ | 253 | c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydroge | 1e-47 | |
| d1zk4a1 | 251 | c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase | 3e-47 | |
| d1ydea1 | 250 | c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase | 8e-47 | |
| d1xkqa_ | 272 | c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorh | 2e-46 | |
| d2ae2a_ | 259 | c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu | 2e-45 | |
| d1hdca_ | 254 | c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydr | 4e-45 | |
| d1h5qa_ | 260 | c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Aga | 2e-44 | |
| d1yxma1 | 297 | c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA re | 7e-44 | |
| d1ulsa_ | 242 | c.2.1.2 (A:) beta-keto acyl carrier protein reduct | 1e-43 | |
| d1w6ua_ | 294 | c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondr | 1e-43 | |
| d1vl8a_ | 251 | c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga | 1e-43 | |
| d1g0oa_ | 272 | c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase | 2e-43 | |
| d1fmca_ | 255 | c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase | 3e-43 | |
| d2c07a1 | 251 | c.2.1.2 (A:54-304) beta-keto acyl carrier protein | 3e-43 | |
| d1pr9a_ | 244 | c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapie | 7e-43 | |
| d1ja9a_ | 259 | c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reduc | 7e-43 | |
| d1cyda_ | 242 | c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus muscul | 2e-42 | |
| d2rhca1 | 257 | c.2.1.2 (A:5-261) beta-keto acyl carrier protein r | 5e-42 | |
| d1ae1a_ | 258 | c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu | 6e-42 | |
| d1yb1a_ | 244 | c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase | 1e-41 | |
| d1xhla_ | 274 | c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorh | 1e-41 | |
| d1geea_ | 261 | c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megat | 1e-41 | |
| d1gz6a_ | 302 | c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase do | 2e-41 | |
| d2gdza1 | 254 | c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrog | 1e-40 | |
| d2bgka1 | 268 | c.2.1.2 (A:11-278) Rhizome secoisolariciresinol de | 3e-40 | |
| d1xu9a_ | 269 | c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase | 6e-40 | |
| d1bdba_ | 276 | c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehy | 7e-39 | |
| d1nffa_ | 244 | c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycob | 7e-38 | |
| d1iy8a_ | 258 | c.2.1.2 (A:) Levodione reductase {Corynebacterium | 2e-37 | |
| d1zema1 | 260 | c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconoba | 2e-36 | |
| d2a4ka1 | 241 | c.2.1.2 (A:2-242) beta-keto acyl carrier protein r | 2e-36 | |
| d1sbya1 | 254 | c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase | 2e-36 | |
| d1o5ia_ | 234 | c.2.1.2 (A:) beta-keto acyl carrier protein reduct | 5e-36 | |
| d1zmta1 | 252 | c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Ag | 5e-36 | |
| d1oaaa_ | 259 | c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus mus | 7e-36 | |
| d2bd0a1 | 240 | c.2.1.2 (A:2-241) Bacterial sepiapterin reductase | 1e-35 | |
| d2ag5a1 | 245 | c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR fami | 2e-35 | |
| d1q7ba_ | 243 | c.2.1.2 (A:) beta-keto acyl carrier protein reduct | 6e-35 | |
| d1x1ta1 | 260 | c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydroge | 1e-34 | |
| d1uzma1 | 237 | c.2.1.2 (A:9-245) beta-keto acyl carrier protein r | 2e-34 | |
| d1gega_ | 255 | c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Kl | 3e-34 | |
| d1k2wa_ | 256 | c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter s | 6e-34 | |
| d1wmaa1 | 275 | c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydrox | 2e-32 | |
| d1edoa_ | 244 | c.2.1.2 (A:) beta-keto acyl carrier protein reduct | 2e-32 | |
| d1uaya_ | 241 | c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogena | 1e-30 | |
| d1mxha_ | 266 | c.2.1.2 (A:) Dihydropteridin reductase (pteridine | 4e-30 | |
| d1ulua_ | 256 | c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermoph | 5e-30 | |
| d2o23a1 | 248 | c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydr | 2e-29 | |
| d1dhra_ | 236 | c.2.1.2 (A:) Dihydropteridin reductase (pteridine | 4e-29 | |
| d1yo6a1 | 250 | c.2.1.2 (A:1-250) Putative carbonyl reductase snif | 1e-25 | |
| d1qsga_ | 258 | c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli | 3e-25 | |
| d2pd4a1 | 274 | c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacte | 4e-23 | |
| d1jtva_ | 285 | c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroi | 2e-22 | |
| d1ooea_ | 235 | c.2.1.2 (A:) Dihydropteridin reductase (pteridine | 3e-22 | |
| d1e7wa_ | 284 | c.2.1.2 (A:) Dihydropteridin reductase (pteridine | 4e-21 | |
| d1fjha_ | 257 | c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase | 3e-18 | |
| d1snya_ | 248 | c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly | 1e-16 | |
| d2h7ma1 | 268 | c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacteri | 2e-13 | |
| d1d7oa_ | 297 | c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (B | 3e-12 | |
| d2fr1a1 | 259 | c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI | 9e-12 | |
| d1jaya_ | 212 | c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase | 7e-11 | |
| d1luaa1 | 191 | c.2.1.7 (A:98-288) Methylene-tetrahydromethanopter | 1e-09 | |
| d1uh5a_ | 329 | c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite | 3e-09 | |
| d1t2aa_ | 347 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H | 1e-04 | |
| d1kewa_ | 361 | c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) { | 7e-04 | |
| d1rpna_ | 321 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomo | 0.002 | |
| d1db3a_ | 357 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric | 0.003 | |
| d1z45a2 | 347 | c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-ep | 0.003 | |
| d1udca_ | 338 | c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras | 0.003 |
| >d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} Length = 247 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (s)-1-phenylethanol dehydrogenase species: Azoarcus sp. ebn1 [TaxId: 76114]
Score = 171 bits (435), Expect = 9e-54
Identities = 73/240 (30%), Positives = 113/240 (47%), Gaps = 13/240 (5%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
LK K+A++TGG +GIG I+ + GA IAI A AA+ +LG + ++ D
Sbjct: 3 LKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVP--APEAEAAIRNLGRRVLTVKCD 60
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
V + D + I+ FG+ DILVN A L+P ++L+ ++ EI+ F+M
Sbjct: 61 VSQPGDVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAK 120
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
+ +K+ G G IIN+++T ++ H + KAA TR+LA + G
Sbjct: 121 AFVPGMKRNG--------WGRIINLTSTTYWLKIEAYTHYISTKAANIGFTRALASDLG- 171
Query: 190 DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK-FGEKWDIAMAALYLASDAG 248
I VN IAP + TA A + + + A D+ AA +LASD
Sbjct: 172 KDGITVNAIAPSLV-RTATTEASALSAMFDVLPNMLQAIPRLQVPLDLTGAAAFLASDDA 230
|
| >d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 259 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 163 bits (414), Expect = 2e-50
Identities = 62/240 (25%), Positives = 95/240 (39%), Gaps = 11/240 (4%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
LK K L+TGG GIG I + GA I R + L ++ G G D
Sbjct: 6 LKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCD 65
Query: 70 VRKREDAVRVVESTINHF-GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
R + +++++ + F GKLDIL+N P D + F I + + +
Sbjct: 66 ASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLS 125
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
A LK G G II +S+ + SA K A++ + R+LA EW
Sbjct: 126 QLAHPLLKASGC--------GNIIFMSSIAGVVSASVGSIYSATKGALNQLARNLACEWA 177
Query: 189 TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAG 248
IR N +AP I T + +E + +FGE +++ +L A
Sbjct: 178 -SDGIRANAVAPAVI-ATPLAEAVYDDEFKKVVISRKPLGRFGEPEEVSSLVAFLCMPAA 235
|
| >d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein TTHA0369 species: Thermus thermophilus [TaxId: 274]
Score = 161 bits (410), Expect = 6e-50
Identities = 69/244 (28%), Positives = 107/244 (43%), Gaps = 19/244 (7%)
Query: 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEG 68
+ GK L+TGG GIG I+ + GA +A+ R A A I +
Sbjct: 2 LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVAEA------IGGAFFQV 55
Query: 69 DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
D+ + VR VE G++D+LVN AA A + +R V+E++ +
Sbjct: 56 DLEDERERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLS 115
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
A + ++K G G I+N+++ A +A+K + ++TRSLAL+
Sbjct: 116 ALAAREMRKVGGGA--------IVNVASVQGLFAEQENAAYNASKGGLVNLTRSLALDLA 167
Query: 189 TDYAIRVNGIAPGPIK----DTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLA 244
IRVN +APG I A PE R D A + G+ ++A A L+LA
Sbjct: 168 -PLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFLA 226
Query: 245 SDAG 248
S+
Sbjct: 227 SEKA 230
|
| >d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Length = 257 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative dehydrogenase ARPG836 (MGC4172) species: Human (Homo sapiens) [TaxId: 9606]
Score = 162 bits (410), Expect = 7e-50
Identities = 57/243 (23%), Positives = 98/243 (40%), Gaps = 13/243 (5%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIP--AIGLE 67
+ ++AL+TG GIG ++ L + G + R + A S G P I
Sbjct: 8 WRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYR 67
Query: 68 GDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIM 127
D+ ED + + + + +DI +N A S +G++ + ++ + I
Sbjct: 68 CDLSNEEDILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSIC 127
Query: 128 CHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHV--SAAKAAVDSITRSLAL 185
EA + +K+ G IINI++ + + SA K AV ++T L
Sbjct: 128 TREAYQSMKERNVD------DGHIININSMSGHRVLPLSVTHFYSATKYAVTALTEGLRQ 181
Query: 186 EWGT-DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLA 244
E IR I+PG + +T KL ++ KA K + D+A A +Y+
Sbjct: 182 ELREAQTHIRATCISPGVV-ETQFAFKL-HDKDPEKAAATYEQMKCLKPEDVAEAVIYVL 239
Query: 245 SDA 247
S
Sbjct: 240 STP 242
|
| >d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 264 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase (5l265) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 157 bits (398), Expect = 6e-48
Identities = 66/251 (26%), Positives = 102/251 (40%), Gaps = 23/251 (9%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIP---AIGL 66
KVA++TG +GIG ++ + GA + I GR L + + G+ +
Sbjct: 3 FAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSV 62
Query: 67 EGDVRKREDAVRVVESTINHFGKLDILVNAAA----GNFLVPAEDLSPNGFRTVIEIDSV 122
DV ++ +T+ FGKLDILVN A + S + + ++
Sbjct: 63 VADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLR 122
Query: 123 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRS 182
+ +A+ +L G I+ S AT + S AKAA+D TR+
Sbjct: 123 SVIALTKKAVPHLSSTK--------GEIVNISSIASGLHATPDFPYYSIAKAAIDQYTRN 174
Query: 183 LALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK-------FGEKWD 235
A++ + IRVN I+PG + G + PEE K MA K G+ D
Sbjct: 175 TAIDLI-QHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQPQD 233
Query: 236 IAMAALYLASD 246
IA +LA
Sbjct: 234 IAEVIAFLADR 244
|
| >d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 253 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3beta/17beta hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Score = 156 bits (395), Expect = 1e-47
Identities = 70/244 (28%), Positives = 108/244 (44%), Gaps = 18/244 (7%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L+GKVAL+TGG SG+G E+ L GA +A + + A L G ++ + D
Sbjct: 4 LQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL---GERSMFVRHD 60
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
V D V+ + G L++LVN A E F +++I++ FI C
Sbjct: 61 VSSEADWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQ 120
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
+ + +K+ +GG IIN+++ + SA+KAAV ++TR+ AL
Sbjct: 121 QGIAAMKE---------TGGSIINMASVSSWLPIEQYAGYSASKAAVSALTRAAALSCRK 171
Query: 190 D-YAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK----FGEKWDIAMAALYLA 244
YAIRVN I P I T + P+ + + + IA L+LA
Sbjct: 172 QGYAIRVNSIHPDGI-YTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPERIAQLVLFLA 230
Query: 245 SDAG 248
SD
Sbjct: 231 SDES 234
|
| >d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} Length = 251 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: R-specific alcohol dehydrogenase species: Lactobacillus brevis [TaxId: 1580]
Score = 155 bits (393), Expect = 3e-47
Identities = 66/240 (27%), Positives = 105/240 (43%), Gaps = 10/240 (4%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L GKVA++TGG GIG I+ + + GA + I GR V A ++ + + D
Sbjct: 4 LDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPD-QIQFFQHD 62
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
+ ++ ++T FG + LVN A E+ + +R ++ ++ G F
Sbjct: 63 SSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTR 122
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
++ +K G G IIN+S+ + +A+K AV +++S AL+
Sbjct: 123 LGIQRMKNKGL-------GASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCAL 175
Query: 190 -DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAG 248
DY +RVN + PG I T V L E GE DIA +YLAS+
Sbjct: 176 KDYDVRVNTVHPGYI-KTPLVDDLPGAEEAMSQRTKTPMGHIGEPNDIAYICVYLASNES 234
|
| >d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 250 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Retinal dehydrogenase/reductase 3 species: Human (Homo sapiens) [TaxId: 9606]
Score = 153 bits (389), Expect = 8e-47
Identities = 76/248 (30%), Positives = 120/248 (48%), Gaps = 21/248 (8%)
Query: 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGL 66
G GKV ++TGGG GIG I GA + I + ++ R+ L A+ +
Sbjct: 1 GTRYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPG----AVFI 56
Query: 67 EGDVRKREDAVRVVESTINHFGKLDILVNAAAGN-FLVPAEDLSPNGFRTVIEIDSVGTF 125
DV + +D +V TI FG+LD +VN A + E+ S GFR ++E++ +GT+
Sbjct: 57 LCDVTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTY 116
Query: 126 IMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLAL 185
+ AL YL+K G +INIS+ + + A K AV ++T++LAL
Sbjct: 117 TLTKLALPYLRKS---------QGNVINISSLVGAIGQAQAVPYVATKGAVTAMTKALAL 167
Query: 186 EWGTDYAIRVNGIAPGPIKDTAGVSKLA-----PEEIRSKATDYMAAYKFGEKWDIAMAA 240
+ Y +RVN I+PG I T +LA P + + G+ ++ AA
Sbjct: 168 DES-PYGVRVNCISPGNI-WTPLWEELAALMPDPRASIREGMLAQPLGRMGQPAEVGAAA 225
Query: 241 LYLASDAG 248
++LAS+A
Sbjct: 226 VFLASEAN 233
|
| >d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} Length = 272 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein R05D8.7 species: Caenorhabditis elegans [TaxId: 6239]
Score = 154 bits (389), Expect = 2e-46
Identities = 59/251 (23%), Positives = 105/251 (41%), Gaps = 23/251 (9%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIP---AIGL 66
K ++TG +GIG ++ + GA + I GR L + G+ +
Sbjct: 3 FSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSV 62
Query: 67 EGDVRKREDAVRVVESTINHFGKLDILVNAAA----GNFLVPAEDLSPNGFRTVIEIDSV 122
DV + +++ ST+ FGK+D+LVN A F D + + ++++
Sbjct: 63 VADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQ 122
Query: 123 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRS 182
M + +L G I+ S A ++ + AKAA+D TRS
Sbjct: 123 AVIEMTKKVKPHLVASK--------GEIVNVSSIVAGPQAQPDFLYYAIAKAALDQYTRS 174
Query: 183 LALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK-------FGEKWD 235
A++ + IRVN ++PG ++ + P++ K ++MA++K G+
Sbjct: 175 TAIDLA-KFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKPEH 233
Query: 236 IAMAALYLASD 246
IA L+LA
Sbjct: 234 IANIILFLADR 244
|
| >d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} Length = 259 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), II [TaxId: 4076]
Score = 150 bits (380), Expect = 2e-45
Identities = 68/244 (27%), Positives = 108/244 (44%), Gaps = 15/244 (6%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L+G AL+TGG GIG+ I +L GA++ R + L + S G D
Sbjct: 6 LEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCD 65
Query: 70 VRKREDAVRVVESTINHF-GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
+ R + ++ + NHF GKL+ILVN A A+D + + ++ I+ + +
Sbjct: 66 LSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLS 125
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
A +LK RG ++ IS+ A Y+ A K A+D +TR LA EW
Sbjct: 126 VLAHPFLKASERGN--------VVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWA 177
Query: 189 TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAY----KFGEKWDIAMAALYLA 244
IRVNG+ PG I T+ V + + + + + + GE ++A +L
Sbjct: 178 -KDNIRVNGVGPGVI-ATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVAFLC 235
Query: 245 SDAG 248
A
Sbjct: 236 FPAA 239
|
| >d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} Length = 254 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase species: Streptomyces hydrogenans [TaxId: 1905]
Score = 149 bits (378), Expect = 4e-45
Identities = 69/238 (28%), Positives = 97/238 (40%), Gaps = 13/238 (5%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L GK ++TGG G+G E + Q GA + + + L G A D
Sbjct: 3 LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL---GDAARYQHLD 59
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
V ED RVV FG +D LVN A + + E S FR V+EI+ G FI
Sbjct: 60 VTIEEDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMK 119
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
+ +K G GG I+NIS+ A+K V +++ A+E GT
Sbjct: 120 TVIPAMKDAG--------GGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELGT 171
Query: 190 DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247
D IRVN + PG T ++ + + E +IA A + L SD
Sbjct: 172 DR-IRVNSVHPGMT-YTPMTAETGIRQGEGNYPNTPMGRVGNEPGEIAGAVVKLLSDT 227
|
| >d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} Length = 260 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Mannitol dehydrogenase species: Mushroom (Agaricus bisporus) [TaxId: 5341]
Score = 147 bits (373), Expect = 2e-44
Identities = 49/240 (20%), Positives = 99/240 (41%), Gaps = 4/240 (1%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAAL-HSLGIPAIGLEG 68
K ++TGG GIG + + GA +A++ R + G+ +
Sbjct: 7 FVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQC 66
Query: 69 DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
DV + + ++ G + L+ A + + PA +L+ F V +++ G F C
Sbjct: 67 DVSNTDIVTKTIQQIDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTC 126
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
K + + + + + I + Q+ +++KAA ++ + LA EW
Sbjct: 127 RAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVKGLAAEWA 186
Query: 189 TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAG 248
IRVN ++PG + +T + + ++IR + +F + ++ A+ L SD
Sbjct: 187 -SAGIRVNALSPGYV-NTDQTAHM-DKKIRDHQASNIPLNRFAQPEEMTGQAILLLSDHA 243
|
| >d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 297 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Peroxisomal trans 2-enoyl CoA reductase species: Human (Homo sapiens) [TaxId: 9606]
Score = 147 bits (373), Expect = 7e-44
Identities = 75/254 (29%), Positives = 118/254 (46%), Gaps = 17/254 (6%)
Query: 2 ESPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAAL----- 56
S +L+G+VA++TGG +GIG I +L + G+ + I R+ L+SA L
Sbjct: 2 RSYLAPGLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLP 61
Query: 57 HSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTV 116
+ I ++ ++R E+ +V+ST++ FGK++ LVN G FL PAE +S G+ V
Sbjct: 62 PTKQARVIPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAV 121
Query: 117 IEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAV 176
+E + GTF MC K G I +H AA+A V
Sbjct: 122 LETNLTGTFYMCKAVYSSWMKEHGGS---------IVNIIVPTKAGFPLAVHSGAARAGV 172
Query: 177 DSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA--PEEIRSKATDYMAAYKFGEKW 234
++T+SLALEW IR+N +APG I V + + + A + G
Sbjct: 173 YNLTKSLALEWA-CSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGVPE 231
Query: 235 DIAMAALYLASDAG 248
+++ +L S A
Sbjct: 232 EVSSVVCFLLSPAA 245
|
| >d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} Length = 242 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus [TaxId: 274]
Score = 145 bits (368), Expect = 1e-43
Identities = 67/239 (28%), Positives = 108/239 (45%), Gaps = 17/239 (7%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
LK K L+TG GIG K GA + + LR A A + A + D
Sbjct: 3 LKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEA-----VGAHPVVMD 57
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
V R + H G+LD +V+ A + + V+ ++ G+F++
Sbjct: 58 VADPASVERGFAEALAHLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAK 117
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
A + +++ I ++A+ Y Q + +A+ A V +TR+LALE G
Sbjct: 118 AASEAMRE---------KNPGSIVLTASRVYLGNLGQANYAASMAGVVGLTRTLALELG- 167
Query: 190 DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAG 248
+ IRVN +APG I +T +K+ PE++R KA + G+ ++A AAL+L SD
Sbjct: 168 RWGIRVNTLAPGFI-ETRMTAKV-PEKVREKAIAATPLGRAGKPLEVAYAALFLLSDES 224
|
| >d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} Length = 294 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR) species: Human (Homo sapiens), [TaxId: 9606]
Score = 147 bits (371), Expect = 1e-43
Identities = 79/250 (31%), Positives = 123/250 (49%), Gaps = 13/250 (5%)
Query: 1 MESPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHS-L 59
M P +GKVA +TGGG+G+G ++ L GA I R+ VL++ + S
Sbjct: 17 MLPPNS---FQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQT 73
Query: 60 GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEI 119
G ++ DVR + V I G +I++N AAGNF+ P E LSPN ++T+ +I
Sbjct: 74 GNKVHAIQCDVRDPDMVQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDI 133
Query: 120 DSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSI 179
GT + E K L K + G ++I+ T + + + ++AKA V+++
Sbjct: 134 VLNGTAFVTLEIGKQLIKAQK-------GAAFLSITTIYAETGSGFVVPSASAKAGVEAM 186
Query: 180 TRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP-EEIRSKATDYMAAYKFGEKWDIAM 238
++SLA EWG Y +R N I PGPIK S+L P + + + G ++A
Sbjct: 187 SKSLAAEWG-KYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPCGRLGTVEELAN 245
Query: 239 AALYLASDAG 248
A +L SD
Sbjct: 246 LAAFLCSDYA 255
|
| >d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} Length = 251 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Gluconate 5-dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Score = 145 bits (367), Expect = 1e-43
Identities = 76/240 (31%), Positives = 115/240 (47%), Gaps = 9/240 (3%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAAL-HSLGIPAIGLEG 68
L+G+VAL+TGG G+GF I+ L + G ++ + R A L G+ +
Sbjct: 3 LRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRC 62
Query: 69 DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
DV E+ +++E+ FGKLD +VNAA N PAE+ + FR VIE++ GT+ +C
Sbjct: 63 DVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVC 122
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
EA S + II S T+ +A+K V S+T++LA EWG
Sbjct: 123 REAFSL-------LRESDNPSIINIGSLTVEEVTMPNISAYAASKGGVASLTKALAKEWG 175
Query: 189 TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAG 248
Y IRVN IAPG + + + E + + G D+ A++LAS+
Sbjct: 176 -RYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPLGRTGVPEDLKGVAVFLASEEA 234
|
| >d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 272 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Score = 146 bits (368), Expect = 2e-43
Identities = 76/252 (30%), Positives = 115/252 (45%), Gaps = 24/252 (9%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT-VLRSAVAALHSLGIPAIGLEG 68
L+GKVAL+TG G GIG E++++LG+ G + + T VAA+ G A ++
Sbjct: 16 LEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKA 75
Query: 69 DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
+V ED VR+ E + FGKLDI+ + + +D++P F V I++ G F +
Sbjct: 76 NVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVA 135
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
EA K+L+ GGR S G A S +K A+++ R +A++
Sbjct: 136 REAYKHLEIGGRLILMGSITG---------QAKAVPKHAVYSGSKGAIETFARCMAIDMA 186
Query: 189 TDYAIRVNGIAPGPIKDTAGVSKLAPEEI------------RSKATDYMAAYKFGEKWDI 236
D I VN +APG I T + E I A + + G DI
Sbjct: 187 -DKKITVNVVAPGGI-KTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDI 244
Query: 237 AMAALYLASDAG 248
A +LAS+ G
Sbjct: 245 ARVVCFLASNDG 256
|
| >d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} Length = 255 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 7-alpha-hydroxysteroid dehydrogenase species: Escherichia coli [TaxId: 562]
Score = 144 bits (365), Expect = 3e-43
Identities = 70/239 (29%), Positives = 111/239 (46%), Gaps = 11/239 (4%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L GK A++TG G+GIG EI++ GA++ + V + LG A D
Sbjct: 9 LDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCD 68
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
+ ++ + + I+ GK+DILVN A G P D+ FR E++ F +
Sbjct: 69 ITSEQELSALADFAISKLGKVDILVNNAGGGGPKP-FDMPMADFRRAYELNVFSFFHLSQ 127
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
++K + GG+I+ I++ +++KAA + R++A + G
Sbjct: 128 LVAPEMEK--------NGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLG- 178
Query: 190 DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAG 248
+ IRVNGIAPG I T + + EI K + + G+ DIA AAL+L S A
Sbjct: 179 EKNIRVNGIAPGAI-LTDALKSVITPEIEQKMLQHTPIRRLGQPQDIANAALFLCSPAA 236
|
| >d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 251 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Score = 144 bits (365), Expect = 3e-43
Identities = 69/239 (28%), Positives = 104/239 (43%), Gaps = 11/239 (4%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
+ KVAL+TG G GIG EI+ L K + + + R + S V + S G + G GD
Sbjct: 8 GENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGD 67
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
V K+E+ V+ + +DILVN A + + + V+ + F +
Sbjct: 68 VSKKEEISEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQ 127
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
K + G IINIS+ + T Q + S++KA V T+SLA E
Sbjct: 128 PISKRMINNR--------YGRIINISSIVGLTGNVGQANYSSSKAGVIGFTKSLAKELA- 178
Query: 190 DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAG 248
I VN IAPG I E+I+ + A + G ++A A +L+SD
Sbjct: 179 SRNITVNAIAPGFISSDMTDKI--SEQIKKNIISNIPAGRMGTPEEVANLACFLSSDKS 235
|
| >d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 244 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Human (Homo sapiens) [TaxId: 9606]
Score = 143 bits (362), Expect = 7e-43
Identities = 58/238 (24%), Positives = 93/238 (39%), Gaps = 16/238 (6%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L G+ L+TG G GIG L GA + + R + L S V + D
Sbjct: 5 LAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPG----IEPVCVD 60
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
+ E E + G +D+LVN AA L P +++ F E++ +
Sbjct: 61 LGDWEA----TERALGSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQ 116
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
+ L G I+N+S+ A + K A+D +T+ +ALE G
Sbjct: 117 IVARGLIARGVPG-------AIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVMALELG- 168
Query: 190 DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247
+ IRVN + P + + G + + + + KF E + A L+L SD
Sbjct: 169 PHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNAILFLLSDR 226
|
| >d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 259 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,6,8-tetrahydroxynaphthalene reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Score = 144 bits (363), Expect = 7e-43
Identities = 64/251 (25%), Positives = 112/251 (44%), Gaps = 22/251 (8%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT-VLRSAVAALHSLGIPAIGLEG 68
L GKVAL TG G GIG I+++LG+ GA++ + + VA L LG + ++
Sbjct: 4 LAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQA 63
Query: 69 DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
D+ K + V + + ++HFG LD +++ + +++ F V +++ G F +
Sbjct: 64 DISKPSEVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVA 123
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
+ LK+ ++GGR +SS ++ T + +KAAV+ R+ A++ G
Sbjct: 124 QQGLKHCRRGGRIILTSSIAAVM---------TGIPNHALYAGSKAAVEGFCRAFAVDCG 174
Query: 189 TDYAIRVNGIAPGPIK-----------DTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIA 237
+ VN IAPG +K G + E+I + + G DI
Sbjct: 175 -AKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPADIG 233
Query: 238 MAALYLASDAG 248
A L +
Sbjct: 234 RAVSALCQEES 244
|
| >d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 242 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Mouse (Mus musculus) [TaxId: 10090]
Score = 142 bits (359), Expect = 2e-42
Identities = 56/238 (23%), Positives = 95/238 (39%), Gaps = 16/238 (6%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
G AL+TG G GIG + L GA + + R + L S + D
Sbjct: 3 FSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPG----IEPVCVD 58
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
+ + E + G +D+LVN AA + P +++ F ++ F +
Sbjct: 59 LGDWDA----TEKALGGIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQ 114
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
+ + G I+N+S+ + + I S+ K A+ +T+++A+E G
Sbjct: 115 MVARDMIN-------RGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKAMAMELG- 166
Query: 190 DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247
+ IRVN + P + G A E K + KF E D+ + L+L SD
Sbjct: 167 PHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERHPLRKFAEVEDVVNSILFLLSDR 224
|
| >d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} Length = 257 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Streptomyces coelicolor [TaxId: 1902]
Score = 141 bits (357), Expect = 5e-42
Identities = 65/246 (26%), Positives = 111/246 (45%), Gaps = 16/246 (6%)
Query: 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVR 71
+VAL+TG SGIG EI+ +LGK G + + R + LR+ + L G+ A G DVR
Sbjct: 2 SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVR 61
Query: 72 KREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEA 131
+ +V + + +G +D+LVN A +L+ + V+E + G F + +
Sbjct: 62 SVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQV 121
Query: 132 LKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDY 191
LK RG G I+NI++T + SA+K V T++L LE
Sbjct: 122 LKAGGMLERGT------GRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELA-RT 174
Query: 192 AIRVNGIAPGPIK---------DTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALY 242
I VN + PG ++ + + +++ EE + T + ++ + ++A Y
Sbjct: 175 GITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAY 234
Query: 243 LASDAG 248
L
Sbjct: 235 LIGPGA 240
|
| >d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), I [TaxId: 4076]
Score = 141 bits (357), Expect = 6e-42
Identities = 63/244 (25%), Positives = 106/244 (43%), Gaps = 14/244 (5%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
LKG AL+TGG GIG+ I +L GA + R + L + G+ G D
Sbjct: 4 LKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCD 63
Query: 70 VRKREDAVRVVESTINHF-GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
+ R + +++++ + F GKL+ILVN A A+D + + ++ + + +
Sbjct: 64 LLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLS 123
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
A LK G +I +S+ ++A SA+K A++ +T+SLA EW
Sbjct: 124 QIAYPLLKASQNGN--------VIFLSSIAGFSALPSVSLYSASKGAINQMTKSLACEWA 175
Query: 189 TDYAIRVNGIAPGPIK----DTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLA 244
IRVN +APG I +TA +E + G+ +++ +L
Sbjct: 176 -KDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQEVSALIAFLC 234
Query: 245 SDAG 248
A
Sbjct: 235 FPAA 238
|
| >d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} Length = 244 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 17-beta-hydroxysteroid dehydrogenase type XI species: Human (Homo sapiens) [TaxId: 9606]
Score = 140 bits (355), Expect = 1e-41
Identities = 42/245 (17%), Positives = 84/245 (34%), Gaps = 19/245 (7%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
+ G++ L+TG G GIG + + K + + + K L A LG D
Sbjct: 5 VTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVD 64
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
RED + G + ILVN A + E++ + F
Sbjct: 65 CSNREDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTK 124
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
L + K G I+ +++ + + + + ++K A ++L E
Sbjct: 125 AFLPAMTKNN--------HGHIVTVASAAGHVSVPFLLAYCSSKFAAVGFHKTLTDELAA 176
Query: 190 --DYAIRVNGIAPGPIK-------DTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAA 240
++ + P + T+ L PEE+ ++ + + + I +
Sbjct: 177 LQITGVKTTCLCPNFVNTGFIKNPSTSLGPTLEPEEVVNRLMHGILTEQ--KMIFIPSSI 234
Query: 241 LYLAS 245
+L +
Sbjct: 235 AFLTT 239
|
| >d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} Length = 274 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein F25D1.5 species: Caenorhabditis elegans [TaxId: 6239]
Score = 141 bits (357), Expect = 1e-41
Identities = 59/249 (23%), Positives = 102/249 (40%), Gaps = 21/249 (8%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPA---IGL 66
GK ++TG +GIG ++ K GA + I GR + L + G+PA +
Sbjct: 2 FSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAV 61
Query: 67 EGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL--VPAEDLSPNGFRTVIEIDSVGT 124
DV + ++ +T+ FGK+DILVN A N D ++ +++
Sbjct: 62 VADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAV 121
Query: 125 FIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLA 184
M + ++L K I+ S A + + AKAA+D TR A
Sbjct: 122 IEMTQKTKEHLIKTKG--------EIVNVSSIVAGPQAHSGYPYYACAKAALDQYTRCTA 173
Query: 185 LEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK-------FGEKWDIA 237
++ + +RVN ++PG + + PE K ++ + K G+ +IA
Sbjct: 174 IDLI-QHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPEEIA 232
Query: 238 MAALYLASD 246
++LA
Sbjct: 233 NIIVFLADR 241
|
| >d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} Length = 261 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase species: Bacillus megaterium [TaxId: 1404]
Score = 141 bits (355), Expect = 1e-41
Identities = 71/240 (29%), Positives = 117/240 (48%), Gaps = 9/240 (3%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK-TVLRSAVAALHSLGIPAIGLEG 68
L+GKV ++TG +G+G ++++ A + + R K S + + +G AI ++G
Sbjct: 5 LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKG 64
Query: 69 DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
DV D + +V+S I FGKLD+++N A V + ++S + + VI+ + G F+
Sbjct: 65 DVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGS 124
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
EA+KY + G +IN+S+ +H +A+K + +T +LALE+
Sbjct: 125 REAIKY-------FVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYA 177
Query: 189 TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAG 248
IRVN I PG I K A E R+ + GE +IA A +LAS
Sbjct: 178 -PKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPEEIAAVAAWLASSEA 236
|
| >d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 302 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 141 bits (357), Expect = 2e-41
Identities = 52/254 (20%), Positives = 101/254 (39%), Gaps = 36/254 (14%)
Query: 3 SPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAI---------MGRRKTVLRSAV 53
SP + G+V L+TG G G+G +L + GA + + +G+ + V
Sbjct: 1 SPLR---FDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVV 57
Query: 54 AALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGF 113
+ G A+ V E ++V++ ++ FG++D++VN A +S +
Sbjct: 58 EEIRRRGGKAVANYDSV---EAGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDW 114
Query: 114 RTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAK 173
+ + G+F + A ++KK G II ++ + Q + SAAK
Sbjct: 115 DIIQRVHLRGSFQVTRAAWDHMKKQN--------YGRIIMTASASGIYGNFGQANYSAAK 166
Query: 174 AAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEK 233
+ + +L +E I N IAP + + PE++ + +
Sbjct: 167 LGLLGLANTLVIEGR-KNNIHCNTIAPNAG--SRMTETVMPEDLV----------EALKP 213
Query: 234 WDIAMAALYLASDA 247
+A L+L ++
Sbjct: 214 EYVAPLVLWLCHES 227
|
| >d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} Length = 254 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 15-hydroxyprostaglandin dehydrogenase, PGDH species: Human (Homo sapiens) [TaxId: 9606]
Score = 138 bits (348), Expect = 1e-40
Identities = 67/247 (27%), Positives = 103/247 (41%), Gaps = 24/247 (9%)
Query: 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL--GIPAIGLEG 68
GKVAL+TG GIG + L GA +A++ AALH + ++
Sbjct: 2 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQC 61
Query: 69 DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
DV ++ ++HFG+LDILVN A N + + ++I+ V
Sbjct: 62 DVADQQQLRDTFRKVVDHFGRLDILVNNAGVN--------NEKNWEKTLQINLVSVISGT 113
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
+ L Y+ K G+ GGIIIN+S+ Q A+K + TRS AL
Sbjct: 114 YLGLDYMSKQNGGE-----GGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRSAALAAN 168
Query: 189 T-DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK-------FGEKWDIAMAA 240
+ +R+N I PG + +TA + + EE + +Y K + IA
Sbjct: 169 LMNSGVRLNAICPGFV-NTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIANGL 227
Query: 241 LYLASDA 247
+ L D
Sbjct: 228 ITLIEDD 234
|
| >d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} Length = 268 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Rhizome secoisolariciresinol dehydrogenase species: Mayapple (Podophyllum peltatum) [TaxId: 35933]
Score = 137 bits (346), Expect = 3e-40
Identities = 62/244 (25%), Positives = 99/244 (40%), Gaps = 14/244 (5%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L+ KVA++TGG GIG + ++GA + I + + S + + D
Sbjct: 4 LQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDV-ISFVHCD 62
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVP--AEDLSPNGFRTVIEIDSVGTFIM 127
V K ED +V++TI GKLDI+ P + F+ V++I+ G F++
Sbjct: 63 VTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLV 122
Query: 128 CHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEW 187
A + + + G I+ S + +A K AV +T SL E
Sbjct: 123 AKHAARVMIPAKK-------GSIVFTASISSFTAGEGVSHVYTATKHAVLGLTTSLCTEL 175
Query: 188 GTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAY---KFGEKWDIAMAALYLA 244
G +Y IRVN ++P + + R + + AA D+A A YLA
Sbjct: 176 G-EYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVADAVAYLA 234
Query: 245 SDAG 248
D
Sbjct: 235 GDES 238
|
| >d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 11-beta-hydroxysteroid dehydrogenase 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 136 bits (344), Expect = 6e-40
Identities = 53/257 (20%), Positives = 96/257 (37%), Gaps = 20/257 (7%)
Query: 1 MESPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG 60
+ F+ ++L+GK ++TG GIG E++ L K GA + + R K L+ V+ LG
Sbjct: 3 LNEEFRPEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELG 62
Query: 61 IP-AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEI 119
A + G + A + V G LD+L+ N + + R +E+
Sbjct: 63 AASAHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEV 122
Query: 120 DSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSI 179
+ + ++ AL LK+ G I+ +S+ A SA+K A+D
Sbjct: 123 NFLSYVVLTVAALPMLKQS---------NGSIVVVSSLAGKVAYPMVAAYSASKFALDGF 173
Query: 180 TRSLALEWGTD-YAIRVNGIAPGPIK---------DTAGVSKLAPEEIRSKATDYMAAYK 229
S+ E+ + + G I + EE + A +
Sbjct: 174 FSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAVSGIVHMQAAPKEECALEIIKGGALRQ 233
Query: 230 FGEKWDIAMAALYLASD 246
+D ++ L +
Sbjct: 234 EEVYYDSSLWTTLLIRN 250
|
| >d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} Length = 276 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase species: Pseudomonas sp., lb400 [TaxId: 306]
Score = 134 bits (338), Expect = 7e-39
Identities = 59/251 (23%), Positives = 90/251 (35%), Gaps = 27/251 (10%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
LKG+ L+TGG SG+G + + GA +A++ + L G +G+ GD
Sbjct: 3 LKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETD---HGDNVLGIVGD 59
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSP-----NGFRTVIEIDSVGT 124
VR ED + + FGK+D L+ A A P F V I+ G
Sbjct: 60 VRSLEDQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGY 119
Query: 125 FIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLA 184
L L G +I IS Y +AAK A+ + R LA
Sbjct: 120 IHAVKACLPALVASR--------GNVIFTISNAGFY-PNGGGPLYTAAKHAIVGLVRELA 170
Query: 185 LEWGTDYAIRVNGIAPGPIK--------DTAGVSKLAPEEIRSKATDYMAAYKFGEKWDI 236
E +RVNG+ G I G ++ + + + E +
Sbjct: 171 FELAPY--VRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSVLPIGRMPEVEEY 228
Query: 237 AMAALYLASDA 247
A ++ A+
Sbjct: 229 TGAYVFFATRG 239
|
| >d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 244 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative oxidoreductase Rv2002 species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 130 bits (329), Expect = 7e-38
Identities = 65/238 (27%), Positives = 105/238 (44%), Gaps = 19/238 (7%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L GKVAL++GG G+G + GA + ++ A L A + D
Sbjct: 4 LTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAE---LADAARYVHLD 60
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
V + V++ + FG L +LVN A + ED + ++ +++++ G F+
Sbjct: 61 VTQPAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIR 120
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
+K +K+ GRG IINIS+ T +A K AV +T+S ALE G
Sbjct: 121 AVVKPMKEAGRGS--------IINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELG- 171
Query: 190 DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247
IRVN I PG + T + + ++ A + E +++ +YLASD
Sbjct: 172 PSGIRVNSIHPGLV-KTPMTDWVPEDIFQT------ALGRAAEPVEVSNLVVYLASDE 222
|
| >d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Levodione reductase species: Corynebacterium aquaticum [TaxId: 144185]
Score = 130 bits (327), Expect = 2e-37
Identities = 62/248 (25%), Positives = 106/248 (42%), Gaps = 18/248 (7%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL--GIPAIGLE 67
+V L+TGGGSG+G +++L GA ++++ L ++ AA+ +
Sbjct: 2 FTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTV 61
Query: 68 GDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLV-PAEDLSPNGFRTVIEIDSVGTFI 126
DV V +T FG++D N A P E + F V+ I+ G F+
Sbjct: 62 ADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFL 121
Query: 127 MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALE 186
+ LK +++ G+++N ++ Q +AAK V +TR+ A+E
Sbjct: 122 GLEKVLKIMRE--------QGSGMVVNTASVGGIRGIGNQSGYAAAKHGVVGLTRNSAVE 173
Query: 187 WGTDYAIRVNGIAPGPIK------DTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAA 240
+G Y IR+N IAPG I + P + + + ++GE +IA
Sbjct: 174 YG-RYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAPEIAAVV 232
Query: 241 LYLASDAG 248
+L SD
Sbjct: 233 AFLLSDDA 240
|
| >d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} Length = 260 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Xylitol dehydrogenase species: Gluconobacter oxydans [TaxId: 442]
Score = 127 bits (320), Expect = 2e-36
Identities = 61/253 (24%), Positives = 104/253 (41%), Gaps = 24/253 (9%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
GKV L+TG G IG +L+L + G AIA++ + L A A++ G+ A D
Sbjct: 3 FNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCD 62
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGN-FLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
V E + V+S + FGK+D L N A P +D + F V+ I+ G F +
Sbjct: 63 VTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVL 122
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
+ + G+ I+N ++ +K A+ ++T + AL+
Sbjct: 123 KAVSRQMITQNYGR--------IVNTASMAGVKGPPNMAAYGTSKGAIIALTETAALDLA 174
Query: 189 TDYAIRVNGIAPGPI--------------KDTAGVSKLAPEEIRSKATDYMAAYKFGEKW 234
Y IRVN I+PG + K + P+ + + + ++G+
Sbjct: 175 -PYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDIN 233
Query: 235 DIAMAALYLASDA 247
+I +L D
Sbjct: 234 EIPGVVAFLLGDD 246
|
| >d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} Length = 241 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus, TTHB020 [TaxId: 274]
Score = 127 bits (319), Expect = 2e-36
Identities = 63/239 (26%), Positives = 104/239 (43%), Gaps = 17/239 (7%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L GK L+TG SGIG + GA++ + R + +L AVAA L AI + D
Sbjct: 3 LSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAA---LEAEAIAVVAD 59
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
V + V + FG+L + + A + +L + V+ ++ G+F++
Sbjct: 60 VSDPKAVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVAR 119
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
+A + L++GG + S G+ + H +A K V + R+LALE
Sbjct: 120 KAGEVLEEGGSLVLTGSVAGLGA-----------FGLAHYAAGKLGVVGLARTLALELA- 167
Query: 190 DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAG 248
+RVN + PG I T + L P + + G ++A AAL+L S+
Sbjct: 168 RKGVRVNVLLPGLI-QTPMTAGLPPWA-WEQEVGASPLGRAGRPEEVAQAALFLLSEES 224
|
| >d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} Length = 254 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Drosophila alcohol dehydrogenase species: Fly (Drosophila lebanonensis) [TaxId: 7225]
Score = 127 bits (319), Expect = 2e-36
Identities = 46/241 (19%), Positives = 75/241 (31%), Gaps = 17/241 (7%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAAL-HSLGIPAIGLEG 68
L K + GIG + S +L K ++ R + + +
Sbjct: 3 LTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTY 62
Query: 69 DV-RKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIM 127
DV ++ ++++ + +DIL+N A L + I I+ G
Sbjct: 63 DVTVPVAESKKLLKKIFDQLKTVDILINGAG--------ILDDHQIERTIAINFTGLVNT 114
Query: 128 CHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEW 187
L + + GGII NI + + A SA+KAAV S T SLA
Sbjct: 115 TTAILDF-----WDKRKGGPGGIIANICSVTGFNAIHQVPVYSASKAAVVSFTNSLAKLA 169
Query: 188 GTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247
+ I PG T V + + + A +A
Sbjct: 170 P-ITGVTAYSINPGIT-RTPLVHTFNSWLDVEPRVAELLLSHPTQTSEQCGQNFVKAIEA 227
Query: 248 G 248
Sbjct: 228 N 228
|
| >d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} Length = 234 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermotoga maritima [TaxId: 2336]
Score = 125 bits (316), Expect = 5e-36
Identities = 50/238 (21%), Positives = 98/238 (41%), Gaps = 25/238 (10%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
++ K L+ GIG ++ L + GA + I R + +L+ + + D
Sbjct: 2 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGHRY---------VVCD 52
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
+RK D + ++DILV A G ++L+ F+ I+ + +
Sbjct: 53 LRKDLDLL------FEKVKEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVR 106
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
L +K+ G G+ I+ I++ + ++A+ A+ ++L+ E
Sbjct: 107 NYLPAMKEKGWGR--------IVAITSFSVISPIENLYTSNSARMALTGFLKTLSFEVA- 157
Query: 190 DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247
Y I VN +APG +T V +L EE + + + + + +IA +L S+
Sbjct: 158 PYGITVNCVAPGWT-ETERVKELLSEEKKKQVESQIPMRRMAKPEEIASVVAFLCSEK 214
|
| >d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} Length = 252 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Halohydrin dehalogenase HheC species: Agrobacterium tumefaciens [TaxId: 358]
Score = 126 bits (317), Expect = 5e-36
Identities = 41/241 (17%), Positives = 88/241 (36%), Gaps = 24/241 (9%)
Query: 15 ALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKRE 74
A++T G +L+L + G +A A + +
Sbjct: 3 AIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFA------ETYPQLKPMSEQ 56
Query: 75 DAVRVVESTINHFGKLDILVNAAAGNFLV-PAEDLSPNGFRTVIEIDSVGTFIMCHEALK 133
+ ++E+ + +G++D+LV+ P + + +R +E + F + +
Sbjct: 57 EPAELIEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVAS 116
Query: 134 YLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAI 193
+KK G II I++ + ++A+A ++ +L+ E G +Y I
Sbjct: 117 QMKKRKSGH--------IIFITSATPFGPWKELSTYTSARAGACTLANALSKELG-EYNI 167
Query: 194 RVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK-------FGEKWDIAMAALYLASD 246
V I P + + P E +++A K G + ++ +LAS
Sbjct: 168 PVFAIGPNYL-HSEDSPYFYPTEPWKTNPEHVAHVKKVTALQRLGTQKELGELVAFLASG 226
Query: 247 A 247
+
Sbjct: 227 S 227
|
| >d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 259 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sepiapterin reductase species: Mouse (Mus musculus) [TaxId: 10090]
Score = 126 bits (316), Expect = 7e-36
Identities = 48/255 (18%), Positives = 82/255 (32%), Gaps = 24/255 (9%)
Query: 8 DILKGKVALLTGGGSGIGFEISLQLGK---HGAAIAIMGRRKTVLRSAVAALHS--LGIP 62
D L V +LTG G G ++ QL + G+ + + R +++LR L + +
Sbjct: 2 DGLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLK 61
Query: 63 AIGLEGDVRKREDAVRVV----ESTINHFGKLDILVNAAAGNFLVPA---EDLSPNGFRT 115
+ D+ R++ E + +L+N AA V
Sbjct: 62 VVLAAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNN 121
Query: 116 VIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAA 175
++ + L + ++NIS+ A KAA
Sbjct: 122 YWALNLTSMLCLTSGTLNAFQDSPGLS------KTVVNISSLCALQPYKGWGLYCAGKAA 175
Query: 176 VDSITRSLALEWGTDYAIRVNGIAPGPIK---DTAGVSKLAPEEIRSKATDYMAAYKFGE 232
D + + LA E ++RV APGP+ E+RSK + +
Sbjct: 176 RDMLYQVLAAEE---PSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSDGALVD 232
Query: 233 KWDIAMAALYLASDA 247
A L L
Sbjct: 233 CGTSAQKLLGLLQKD 247
|
| >d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} Length = 240 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Bacterial sepiapterin reductase species: Chlorobium tepidum [TaxId: 1097]
Score = 124 bits (312), Expect = 1e-35
Identities = 43/242 (17%), Positives = 77/242 (31%), Gaps = 27/242 (11%)
Query: 13 KVALLTGGGSGIGFEISLQLGKHGA-------AIAIMGRRKTVLRSAVAALHSLGIPAIG 65
+ L+TG G GIG I+L+ + + + R L + G
Sbjct: 2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDT 61
Query: 66 LEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTF 125
+ D+ D R+ + +G +D LVN A DL+ F + + GTF
Sbjct: 62 ITADISDMADVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTF 121
Query: 126 IMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLAL 185
+ +++ G I I++ A + +K + ++ L
Sbjct: 122 FLTQALFALMERQH--------SGHIFFITSVAATKAFRHSSIYCMSKFGQRGLVETMRL 173
Query: 186 EWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245
+R+ + PG + + K D M A DIA +
Sbjct: 174 YAR-KCNVRITDVQPGAVY----------TPMWGKVDDEMQA-LMMMPEDIAAPVVQAYL 221
Query: 246 DA 247
Sbjct: 222 QP 223
|
| >d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} Length = 245 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dehydrogenase/reductase SDR family member 6, DHRS6 species: Human (Homo sapiens) [TaxId: 9606]
Score = 124 bits (313), Expect = 2e-35
Identities = 52/242 (21%), Positives = 89/242 (36%), Gaps = 21/242 (8%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L GKV +LT GIG +L + GA + ++ L+ G++
Sbjct: 4 LDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEK--------YPGIQTR 55
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
V ++ + N +LD+L N A D + + ++ ++M
Sbjct: 56 VLDVTKKKQIDQ-FANEVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIK 114
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
L + SG II S + S KAAV +T+S+A ++
Sbjct: 115 AFLPKMLAQ-------KSGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSVAADFI- 166
Query: 190 DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAY----KFGEKWDIAMAALYLAS 245
IR N + PG + + ++ +A + +F +IAM +YLAS
Sbjct: 167 QQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAMLCVYLAS 226
Query: 246 DA 247
D
Sbjct: 227 DE 228
|
| >d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} Length = 243 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Escherichia coli [TaxId: 562]
Score = 122 bits (308), Expect = 6e-35
Identities = 62/239 (25%), Positives = 99/239 (41%), Gaps = 14/239 (5%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
+GK+AL+TG GIG I+ L GA + + ++ LG GL +
Sbjct: 2 FEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDY---LGANGKGLMLN 58
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
V V+E FG++DILVN A + + +IE + F +
Sbjct: 59 VTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSK 118
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
++ + K G II I + + Q + +AAKA + ++SLA E
Sbjct: 119 AVMRAMMKKR--------HGRIITIGSVVGTMGNGGQANYAAAKAGLIGFSKSLAREVA- 169
Query: 190 DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAG 248
I VN +APG I+ + ++ R+ + A + G +IA A +LASD
Sbjct: 170 SRGITVNVVAPGFIETDMTRAL--SDDQRAGILAQVPAGRLGGAQEIANAVAFLASDEA 226
|
| >d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} Length = 260 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: D(-)-3-hydroxybutyrate dehydrogenase species: Pseudomonas fragi [TaxId: 296]
Score = 122 bits (308), Expect = 1e-34
Identities = 71/253 (28%), Positives = 102/253 (40%), Gaps = 23/253 (9%)
Query: 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAA--LHSLGIPAIGL 66
+LKGKVA++TG SGIG I+ L GA I + G V A G+ +
Sbjct: 1 MLKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYD 60
Query: 67 EGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFI 126
D+ K E +V++ + G++DILVN A ED + ++ ++ F
Sbjct: 61 GADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFH 120
Query: 127 MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALE 186
AL ++KK G G IINI++ A+ + AAK V T+ ALE
Sbjct: 121 GTAAALPHMKKQGF--------GRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALE 172
Query: 187 WGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK-----------FGEKWD 235
I N I PG + T V K D A + F
Sbjct: 173 TA-GQGITANAICPGWV-RTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQ 230
Query: 236 IAMAALYLASDAG 248
+ A++LASDA
Sbjct: 231 LGGTAVFLASDAA 243
|
| >d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 237 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 121 bits (305), Expect = 2e-34
Identities = 57/239 (23%), Positives = 99/239 (41%), Gaps = 22/239 (9%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
+ L+TGG GIG I+ +L G +A+ R + G+E D
Sbjct: 5 FVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKG-----------LFGVEVD 53
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
V + R + H G +++LV+ A + ++ F VI + G F +
Sbjct: 54 VTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQ 113
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
A + +++ G+ +I I + Q + +A+KA V + RS+A E +
Sbjct: 114 RASRSMQRNKFGR--------MIFIGSVSGLWGIGNQANYAASKAGVIGMARSIAREL-S 164
Query: 190 DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAG 248
+ N +APG I DT L E I+ A ++ A + G ++A +LAS+
Sbjct: 165 KANVTANVVAPGYI-DTDMTRAL-DERIQQGALQFIPAKRVGTPAEVAGVVSFLASEDA 221
|
| >d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} Length = 255 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: meso-2,3-butanediol dehydrogenase species: Klebsiella pneumoniae [TaxId: 573]
Score = 121 bits (305), Expect = 3e-34
Identities = 63/245 (25%), Positives = 100/245 (40%), Gaps = 17/245 (6%)
Query: 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK 72
KVAL+TG G GIG I+L+L K G A+AI ++ + ++ G A+ ++ DV
Sbjct: 2 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSD 61
Query: 73 REDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEAL 132
R+ VE G D++VN A P E ++P V I+ G A+
Sbjct: 62 RDQVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAV 121
Query: 133 KYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYA 192
+ KK G G IIN + + S++K AV +T++ A +
Sbjct: 122 EAFKKEGHGG-------KIINACSQAGHVGNPELAVYSSSKFAVRGLTQTAARDLA-PLG 173
Query: 193 IRVNGIAPGPI---------KDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYL 243
I VNG PG + + + + ++ + + E D+A YL
Sbjct: 174 ITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVSYL 233
Query: 244 ASDAG 248
AS
Sbjct: 234 ASPDS 238
|
| >d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} Length = 256 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sorbitol dehydrogenase species: Rhodobacter sphaeroides [TaxId: 1063]
Score = 121 bits (303), Expect = 6e-34
Identities = 67/248 (27%), Positives = 101/248 (40%), Gaps = 20/248 (8%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L GK AL+TG GIG + + GA +AI R+ A +G A + D
Sbjct: 3 LDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAE---IGPAACAIALD 59
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
V + R V ++ +G +DILVN AA L P +++ + + I+ GT M
Sbjct: 60 VTDQASIDRCVAELLDRWGSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQ 119
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
+ + GGRG IIN+++ A KAAV S+T+S L
Sbjct: 120 AVARAMIAGGRGG-------KIINMASQAGRRGEALVGVYCATKAAVISLTQSAGLNLI- 171
Query: 190 DYAIRVNGIAPGP---------IKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAA 240
+ I VN IAPG A L E + + + + G D+ A
Sbjct: 172 RHGINVNAIAPGVVDGEHWDGVDAKFADYENLPRGEKKRQVGAAVPFGRMGRAEDLTGMA 231
Query: 241 LYLASDAG 248
++LA+
Sbjct: 232 IFLATPEA 239
|
| >d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 275 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Score = 117 bits (294), Expect = 2e-32
Identities = 53/267 (19%), Positives = 85/267 (31%), Gaps = 52/267 (19%)
Query: 13 KVALLTGGGSGIGFEISLQLGK-HGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVR 71
VAL+TGG GIG I L + + + R T ++AV L + G+ + D+
Sbjct: 4 HVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDID 63
Query: 72 KREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEA 131
+ + + +G LD+LVN A F V ++ + GT +C E
Sbjct: 64 DLQSIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTEL 123
Query: 132 LKYLKKGGRGQASSSSGGI-------------------------------IINISATLHY 160
L +K GR SS + + + +H
Sbjct: 124 LPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVEDTKKGVHQ 183
Query: 161 TATWYQIHVSAAKAAVDSITRSLALEWGTDYA---IRVNGIAPGPIKDTAGVSKLAPEEI 217
W K V ++R A + I +N PG ++
Sbjct: 184 KEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVR------------- 230
Query: 218 RSKATDYMAAYKFGEKWDIAMAALYLA 244
TD + A +YLA
Sbjct: 231 ----TDMAGPKATKSPEEGAETPVYLA 253
|
| >d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 244 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Score = 116 bits (291), Expect = 2e-32
Identities = 61/238 (25%), Positives = 104/238 (43%), Gaps = 13/238 (5%)
Query: 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR-KTVLRSAVAALHSLGIPAIGLEGDVR 71
V ++TG GIG I+L LGK G + + R + + G AI GDV
Sbjct: 2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVS 61
Query: 72 KREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEA 131
K D ++++ I+ +G +D++VN A + + + VI+++ G F+ A
Sbjct: 62 KEADVEAMMKTAIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAA 121
Query: 132 LKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDY 191
K + K G IINI++ + Q + +AAKA V +++ A E
Sbjct: 122 TKIMMKKR--------KGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGA-SR 172
Query: 192 AIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLA-SDAG 248
I VN + PG I ++ E++ K + + G+ ++A +LA S A
Sbjct: 173 NINVNVVCPGFIAS--DMTAKLGEDMEKKILGTIPLGRTGQPENVAGLVEFLALSPAA 228
|
| >d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 241 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Thermus thermophilus [TaxId: 274]
Score = 111 bits (279), Expect = 1e-30
Identities = 57/238 (23%), Positives = 96/238 (40%), Gaps = 19/238 (7%)
Query: 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK 72
+ AL+TGG SG+G +L L G + ++ R+ G I +EGDV +
Sbjct: 2 RSALVTGGASGLGRAAALALKARGYRVVVLDLRRE------------GEDLIYVEGDVTR 49
Query: 73 REDAVRVVESTINHFGKLDILVNA---AAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
ED R V ++ A A L FR V+E++ +GTF +
Sbjct: 50 EEDVRRAVARAQEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLR 109
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
A +++ + G+I+N ++ + Q +A+K V ++T A E
Sbjct: 110 LAAWAMRE--NPPDAEGQRGVIVNTASVAAFEGQIGQAAYAASKGGVVALTLPAARELA- 166
Query: 190 DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247
+ IRV +APG DT + L + S A + G + A L++ +
Sbjct: 167 GWGIRVVTVAPGLF-DTPLLQGLPEKAKASLAAQVPFPPRLGRPEEYAALVLHILENP 223
|
| >d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} Length = 266 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Trypanosoma cruzi [TaxId: 5693]
Score = 111 bits (277), Expect = 4e-30
Identities = 51/249 (20%), Positives = 90/249 (36%), Gaps = 18/249 (7%)
Query: 14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAA--LHSLGIPAIGLEGDVR 71
A++TGG IG I+++L + G + + R + A + A+ +GD+
Sbjct: 3 AAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLS 62
Query: 72 K----REDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIM 127
+ +++ + FG+ D+LVN A+ + P + +
Sbjct: 63 LSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAEL 122
Query: 128 CHEALK--------YLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSI 179
+ ++ G G A S ++N+ + + AK A+ +
Sbjct: 123 FGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLPLPGFCVYTMAKHALGGL 182
Query: 180 TRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMA 239
TR+ ALE IRVN +APG + + EE R K IA A
Sbjct: 183 TRAAALELA-PRHIRVNAVAPGLSLLPPAMPQETQEEYRRKV---PLGQSEASAAQIADA 238
Query: 240 ALYLASDAG 248
+L S
Sbjct: 239 IAFLVSKDA 247
|
| >d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} Length = 256 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Thermus thermophilus [TaxId: 274]
Score = 110 bits (276), Expect = 5e-30
Identities = 54/245 (22%), Positives = 98/245 (40%), Gaps = 18/245 (7%)
Query: 10 LKGKVALLTGGGS--GIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLE 67
L GK AL+ G + +GF I+ +L + GA +A+ + + + A +LG +
Sbjct: 6 LSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLF-R 64
Query: 68 GDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVP----AEDLSPNGFRTVIEIDSVG 123
DV + E+ + FG LD LV+A A D + +E+ +
Sbjct: 65 ADVTQDEELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYS 124
Query: 124 TFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSL 183
+ A L++GG I+ ++ ++ AKAA+++ R L
Sbjct: 125 LVAVARRAEPLLREGGG----------IVTLTYYASEKVVPKYNVMAIAKAALEASVRYL 174
Query: 184 ALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYL 243
A E G +RVN I+ GP++ A S ++ + + + ++ L+L
Sbjct: 175 AYELG-PKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPLRRNITQEEVGNLGLFL 233
Query: 244 ASDAG 248
S
Sbjct: 234 LSPLA 238
|
| >d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 248 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Score = 108 bits (271), Expect = 2e-29
Identities = 46/241 (19%), Positives = 93/241 (38%), Gaps = 7/241 (2%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAAL---HSLGIPAIGL 66
+KG VA++TGG SG+G + +L GA+ ++ + + L +
Sbjct: 3 VKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTS 62
Query: 67 EGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFI 126
E DV+ + ++ + A+ L + + F+ V++++ +GTF
Sbjct: 63 EKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFN 122
Query: 127 MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALE 186
+ + + G+IIN ++ + Q SA+K + +T +A +
Sbjct: 123 VIRLVAGEMGQ--NEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIARD 180
Query: 187 WGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246
IRV IAPG T ++ L + A+ + G+ + A + +
Sbjct: 181 LA-PIGIRVMTIAPGLF-GTPLLTSLPEKVCNFLASQVPFPSRLGDPAEYAHLVQAIIEN 238
Query: 247 A 247
Sbjct: 239 P 239
|
| >d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 236 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 107 bits (269), Expect = 4e-29
Identities = 37/239 (15%), Positives = 68/239 (28%), Gaps = 30/239 (12%)
Query: 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDV 70
+ + L+ GG +G +A + + SA + +
Sbjct: 1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEASASVIVK--------MTDSF 52
Query: 71 RKREDAVRVVESTINHFGKLDILVNAAAGN-FLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
++ D V + K+D ++ A G + + + I H
Sbjct: 53 TEQADQVTAEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSH 112
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG- 188
A K+LK+GG + + + T I AK AV + +SLA +
Sbjct: 113 LATKHLKEGGLLTLAGAKAALD----------GTPGMIGYGMAKGAVHQLCQSLAGKNSG 162
Query: 189 TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247
+ P + DT K PE S + + +
Sbjct: 163 MPSGAAAIAVLPVTL-DTPMNRKSMPEADFS---------SWTPLEFLVETFHDWITGN 211
|
| >d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative carbonyl reductase sniffer species: Caenorhabditis elegans [TaxId: 6239]
Score = 99.2 bits (246), Expect = 1e-25
Identities = 33/210 (15%), Positives = 68/210 (32%), Gaps = 19/210 (9%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGA--AIAIMGRRKTVLRSAVAALHSLGIPAIGLE 67
+ ++TG GIG + QL K I R + L
Sbjct: 1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSI---KDSRVHVLP 57
Query: 68 GDVRKREDAVRVVESTINHFGK--LDILVNAAAGNFLV-PAEDLSPNGFRTVIEIDSVGT 124
V + V G L +L+N A + + +++++
Sbjct: 58 LTVTCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSV 117
Query: 125 FIMCHEALKYLKKGGRGQASSSSG----------GIIINISATLHYTATWYQIHVSAAKA 174
++ + L LK ++ + +I+ +A + + +KA
Sbjct: 118 VLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYRMSKA 177
Query: 175 AVDSITRSLALEWGTDYAIRVNGIAPGPIK 204
A++ R+LA++ D + V PG ++
Sbjct: 178 AINMFGRTLAVDLK-DDNVLVVNFCPGWVQ 206
|
| >d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Escherichia coli [TaxId: 562]
Score = 98.1 bits (243), Expect = 3e-25
Identities = 50/247 (20%), Positives = 87/247 (35%), Gaps = 19/247 (7%)
Query: 9 ILKGKVALLTGGGS--GIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGL 66
L GK L+TG S I + I+ + + GA +A + L+ V + I L
Sbjct: 2 FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDK-LKGRVEEFAAQLGSDIVL 60
Query: 67 EGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPN-----GFRTVIEIDS 121
+ DV + + + K D V++ + N GF+ +I S
Sbjct: 61 QCDVAEDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISS 120
Query: 122 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITR 181
M L G ++ +S A + AKA++++ R
Sbjct: 121 YSFVAMAKACRSMLNPGS----------ALLTLSYLGAERAIPNYNVMGLAKASLEANVR 170
Query: 182 SLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAAL 241
+A G +RVN I+ GPI+ A ++ + + D+ +A
Sbjct: 171 YMANAMG-PEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAA 229
Query: 242 YLASDAG 248
+L SD
Sbjct: 230 FLCSDLS 236
|
| >d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} Length = 274 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Helicobacter pylori [TaxId: 210]
Score = 92.4 bits (228), Expect = 4e-23
Identities = 52/242 (21%), Positives = 85/242 (35%), Gaps = 10/242 (4%)
Query: 9 ILKGKVALLTG--GGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGL 66
LKGK L+ G I + I+ GA +A +++ + V +
Sbjct: 2 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEK-RVRPIAQELNSPYVY 60
Query: 67 EGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFI 126
E DV K E + S G LD +V++ A E ++ +
Sbjct: 61 ELDVSKEEHFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVY 120
Query: 127 MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALE 186
E LK +G ++ +S + + AKAA++S R LA++
Sbjct: 121 SLIELTNTLKPLLN------NGASVLTLSYLGSTKYMAHYNVMGLAKAALESAVRYLAVD 174
Query: 187 WGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246
G + IRVN ++ GPI+ A I K ++ A +YL S
Sbjct: 175 LG-KHHIRVNALSAGPIRTLASSGIADFRMILKWNEINAPLRKNVSLEEVGNAGMYLLSS 233
Query: 247 AG 248
Sbjct: 234 LS 235
|
| >d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Score = 91.1 bits (225), Expect = 2e-22
Identities = 53/237 (22%), Positives = 95/237 (40%), Gaps = 21/237 (8%)
Query: 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGR------RKTVLRSAVAALHSLGIPAIGL 66
V L+TG SGIG ++++L + + + L A AL L
Sbjct: 3 TVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETL 62
Query: 67 EGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFI 126
+ DVR + E D+LV A L P E L + +V++++ VGT
Sbjct: 63 QLDVRDSKSVAAARERVTEGRV--DVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVR 120
Query: 127 MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALE 186
M L +K+ G G ++ + + A+K A++ + SLA+
Sbjct: 121 MLQAFLPDMKRRGS--------GRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVL 172
Query: 187 WGTDYAIRVNGIAPGPIKDTAGVSKL--APEEIRSKATDYMAAYKFGEKWDIAMAAL 241
+ + ++ I GP+ TA + K+ +PEE+ + TD ++F + +
Sbjct: 173 LL-PFGVHLSLIECGPV-HTAFMEKVLGSPEEVLDR-TDIHTFHRFYQYLAHSKQVF 226
|
| >d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 235 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 89.5 bits (221), Expect = 3e-22
Identities = 47/241 (19%), Positives = 75/241 (31%), Gaps = 36/241 (14%)
Query: 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVR 71
GKV ++ GG +G I K+G + + + I ++G+
Sbjct: 3 GKV-IVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQADS----------NILVDGNKN 51
Query: 72 KREDAVRVVEST--INHFGKLDILVNAAAGN-FLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
E ++E T ++D + A G + +I+ + I
Sbjct: 52 WTEQEQSILEQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAA 111
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEW- 187
A +LK GG + A T I AKAAV +T SLA +
Sbjct: 112 KLATTHLKPGGL----------LQLTGAAAAMGPTPSMIGYGMAKAAVHHLTSSLAAKDS 161
Query: 188 GTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAAL-YLASD 246
G V I P + DT K P S + I+ L +
Sbjct: 162 GLPDNSAVLTIMPVTL-DTPMNRKWMPNADHS---------SWTPLSFISEHLLKWTTET 211
Query: 247 A 247
+
Sbjct: 212 S 212
|
| >d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Leishmania major [TaxId: 5664]
Score = 87.4 bits (215), Expect = 4e-21
Identities = 49/268 (18%), Positives = 89/268 (33%), Gaps = 39/268 (14%)
Query: 14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAAL----------------- 56
VAL+TG +G I+ L G A+ + R +A++A
Sbjct: 4 VALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLS 63
Query: 57 --HSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFR 114
+ + V +V + H+G+ D+LVN A+ + P +G
Sbjct: 64 NVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHE 123
Query: 115 T--------------VIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY 160
+ +++ + + + + IIN+ +
Sbjct: 124 PCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHR--GTNYSIINMVDAMTN 181
Query: 161 TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSK 220
+ AK A++ +TRS ALE IRVNG+ PG + E RSK
Sbjct: 182 QPLLGYTIYTMAKGALEGLTRSAALELA-PLQIRVNGVGPGLSVLVDDMPPAVWEGHRSK 240
Query: 221 ATDYMAAYKFGEKWDIAMAALYLASDAG 248
+ +++ ++L S
Sbjct: 241 VP---LYQRDSSAAEVSDVVIFLCSSKA 265
|
| >d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 257 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha-hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Score = 79.2 bits (194), Expect = 3e-18
Identities = 38/249 (15%), Positives = 65/249 (26%), Gaps = 31/249 (12%)
Query: 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK 72
+ +++G +GIG L G I + R + V A D+
Sbjct: 2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRD----AEVIA-------------DLST 44
Query: 73 REDAVRVVESTINHFGK-LDILVNAAAGNFLVPAED------------LSPNGFRTVIEI 119
E + + + K +D LV A L + +
Sbjct: 45 AEGRKQAIADVLAKCSKGMDGLVLCAGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKG 104
Query: 120 DSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL-HYTATWYQIHVSAAKAAVDS 178
++ A +L A + G A + H + + +K A+
Sbjct: 105 HQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGNLAYAGSKNALTV 164
Query: 179 ITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAM 238
R A WG P S A + E ++A
Sbjct: 165 AVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAKFVPPMGRRAEPSEMAS 224
Query: 239 AALYLASDA 247
+L S A
Sbjct: 225 VIAFLMSPA 233
|
| >d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 248 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase sniffer species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Score = 74.7 bits (182), Expect = 1e-16
Identities = 37/230 (16%), Positives = 76/230 (33%), Gaps = 15/230 (6%)
Query: 13 KVALLTGGGSGIGFEIS---LQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L+TG G+G + L L + + R + + + L LE D
Sbjct: 3 NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAK-ELEDLAKNHSNIHILEID 61
Query: 70 VRKRE--DAVRVVESTINHFGKLDILV-NAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFI 126
+R + D + + L++L NA + ++ ++V +
Sbjct: 62 LRNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIM 121
Query: 127 MCHEALKYLKKGGRGQASSSSGGIIIN------ISATLHYTATWYQIHVSAAKAAVDSIT 180
+ L LKK + S G I ++ +K+A+++ T
Sbjct: 122 LAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNTDGGMYAYRTSKSALNAAT 181
Query: 181 RSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKF 230
+SL+++ I + PG + T AP ++ + +
Sbjct: 182 KSLSVDLY-PQRIMCVSLHPGWV-KTDMGGSSAPLDVPTSTGQIVQTISK 229
|
| >d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} Length = 268 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]
Score = 65.9 bits (159), Expect = 2e-13
Identities = 44/254 (17%), Positives = 78/254 (30%), Gaps = 21/254 (8%)
Query: 9 ILKGKVALLTG--GGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAA-LHSLGIPAIG 65
+L GK L++G S I F I+ + GA + + G + L + L +
Sbjct: 3 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLEL 62
Query: 66 LEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTF 125
+ V I KLD +V++ + G +
Sbjct: 63 DVQNEEHLASLAGRVTEAIGAGNKLDGVVHSIGFM------PQTGMGINPFFDAPYADVS 116
Query: 126 IMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLAL 185
H + + + G I A ++ AK+A++S+ R +A
Sbjct: 117 KGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSRAMPAYNWMTVAKSALESVNRFVAR 176
Query: 186 EWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK-----------FGEKW 234
E Y +R N +A GPI+ A + + + +
Sbjct: 177 EA-GKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMKDAT 235
Query: 235 DIAMAALYLASDAG 248
+A L SD
Sbjct: 236 PVAKTVCALLSDWL 249
|
| >d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 297 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Score = 62.5 bits (150), Expect = 3e-12
Identities = 50/273 (18%), Positives = 78/273 (28%), Gaps = 41/273 (15%)
Query: 10 LKGKVALLTGGGS--GIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAAL----------- 56
L+GK A + G G G+ ++ L GA I + + +
Sbjct: 6 LRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLP 65
Query: 57 ---------------------HSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVN 95
E FG +DILV+
Sbjct: 66 DGSLMEIKKVYPLDAVFDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVH 125
Query: 96 AAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINIS 155
+ A V L + + I + G I
Sbjct: 126 SLANGPEVSKPLLETSRKGYLA-------AISASSYSFVSLLSHFLPIMNPGGASISLTY 178
Query: 156 ATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPE 215
Y +S+AKAA++S TR LA E G IRVN I+ GP+ A + +
Sbjct: 179 IASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGFID 238
Query: 216 EIRSKATDYMAAYKFGEKWDIAMAALYLASDAG 248
+ + + K ++ AA +L S
Sbjct: 239 TMIEYSYNNAPIQKTLTADEVGNAAAFLVSPLA 271
|
| >d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} Length = 259 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Erythromycin synthase, eryAI, 1st ketoreductase module species: Saccharopolyspora erythraea [TaxId: 1836]
Score = 61.2 bits (147), Expect = 9e-12
Identities = 34/241 (14%), Positives = 67/241 (27%), Gaps = 27/241 (11%)
Query: 12 GKVALLTGGGSGIGFEISLQLGKHGAA-IAIMGRRKTVLRSAVAALHSLG--IPAIGLEG 68
L+TGG G+G +I+ L + GA + ++ R A + L +
Sbjct: 9 TGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAA 68
Query: 69 DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
++VR + I L + +AAA + L+ +G +
Sbjct: 69 CDVTDRESVRELLGGIGDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLH 128
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
+ + S+ + A +D + + +
Sbjct: 129 ELTRE------------LDLTAFVLFSSFASAFGAPGLGGYAPGNAYLDGLAQQRRSDG- 175
Query: 189 TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAG 248
+ +A G + + R M + A AL A D
Sbjct: 176 ----LPATAVAWGTWAGSGMAEGPVADRFRRHGVIEMPP-------ETACRALQNALDRA 224
Query: 249 Q 249
+
Sbjct: 225 E 225
|
| >d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 212 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO) species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Score = 57.8 bits (138), Expect = 7e-11
Identities = 28/206 (13%), Positives = 58/206 (28%), Gaps = 10/206 (4%)
Query: 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK 72
+VALL G G +G ++L+L G I + RR+ + A + A
Sbjct: 2 RVALLGGTG-NLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASITGMKNED 60
Query: 73 REDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEAL 132
+A + TI +D + R
Sbjct: 61 AAEACDIAVLTIPWEHAIDTARDLKNILREKIVVSPLVPVSRGAKGFTYSSERSAAEIVA 120
Query: 133 KYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYA 192
+ L+ A + + + D ++ + + ++
Sbjct: 121 EVLESEKVVSALHTIPA--------ARFANLDEKFDWDVPVCGDDDESKKVVMSLISE-I 171
Query: 193 IRVNGIAPGPIKDTAGVSKLAPEEIR 218
+ + GP+ ++ V L P +
Sbjct: 172 DGLRPLDAGPLSNSRLVESLTPLILN 197
|
| >d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} Length = 191 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylene-tetrahydromethanopterin dehydrogenase species: Methylobacterium extorquens [TaxId: 408]
Score = 54.5 bits (130), Expect = 1e-09
Identities = 25/183 (13%), Positives = 52/183 (28%), Gaps = 20/183 (10%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
+KGK A++ G +G + L GA + + GR+ ++A ++
Sbjct: 21 VKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAA--------DSVNKRFK 72
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
V S + A A + E L ++ I+ V +
Sbjct: 73 VNVTAAETADDASRAEAVKGAHFVFTAGA----IGLELLPQAAWQNESSIEIVADYNAQP 128
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
G ++ G A + + +A + + S +
Sbjct: 129 PLGI------GGIDATDKGKEYGGKRAFGALGIG--GLKLKLHRACIAKLFESSEGVFDA 180
Query: 190 DYA 192
+
Sbjct: 181 EEI 183
|
| >d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 329 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Score = 54.5 bits (129), Expect = 3e-09
Identities = 41/316 (12%), Positives = 80/316 (25%), Gaps = 88/316 (27%)
Query: 12 GKVALLTGGGS--GIGFEISLQLGKHGAAIAIMGRR----------------KTVLRSAV 53
+ + G G G G+ I+ +L K I ++
Sbjct: 2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKD 61
Query: 54 AALHSLGI----------------PAIGLEGDVRKREDAVRVVESTINHFGKLDILVN-- 95
++ L + ++ + V +GK+++LV+
Sbjct: 62 KKMNILDMLPFDASFDTANDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSL 121
Query: 96 AAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINIS 155
A A + S G+ + S +C + +K + + +
Sbjct: 122 ANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIMKPQSSIISLTYHASQKVVPG 181
Query: 156 ATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAG------- 208
++ + TR LA G +Y IR+N I+ GP+K A
Sbjct: 182 YGGGMSSAKAALES---------DTRVLAYHLGRNYNIRINTISAGPLKSRAATAINKLN 232
Query: 209 ------------------------------------VSKLAPEEIRSKATDYMAAYKFGE 232
+ + + Y +
Sbjct: 233 NTYENNTNQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLRQKLL 292
Query: 233 KWDIAMAALYLASDAG 248
DI A +L S
Sbjct: 293 STDIGSVASFLLSRES 308
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Score = 40.7 bits (94), Expect = 1e-04
Identities = 32/226 (14%), Positives = 66/226 (29%), Gaps = 15/226 (6%)
Query: 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK 72
VAL+TG G ++ L + G + + RR + + H P +EG+++
Sbjct: 2 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIE-HLYKNPQAHIEGNMKL 60
Query: 73 REDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEAL 132
+ + ++ +S + ++D VGT +
Sbjct: 61 HYGDLTDSTCLVKIINEVKP--TEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVK 118
Query: 133 KYLKKGGRG--QASSSS-----GGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLAL 185
QAS+S I + + + Y AAK I +
Sbjct: 119 TCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPR-SPY----GAAKLYAYWIVVNFRE 173
Query: 186 EWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFG 231
+ + P + V++ + + + G
Sbjct: 174 AYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLG 219
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Score = 37.8 bits (87), Expect = 7e-04
Identities = 37/200 (18%), Positives = 66/200 (33%), Gaps = 34/200 (17%)
Query: 16 LLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGL-EGDVRKRE 74
L+TGG IG + + K+ + + T + + D+
Sbjct: 4 LITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSA 63
Query: 75 DAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKY 134
+ R+ E + D +++ AA V P F IE + VGT+ + A KY
Sbjct: 64 EITRIFEQ-----YQPDAVMHLAA-ESHVDRSITGPAAF---IETNIVGTYALLEVARKY 114
Query: 135 LKKGGRGQASSSSGGIIINISATLHYTATWYQIHV---------------------SAAK 173
G + ++ +IS Y + V SA+K
Sbjct: 115 WSALGEDKKNNF---RFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASK 171
Query: 174 AAVDSITRSLALEWGTDYAI 193
A+ D + R+ +G +
Sbjct: 172 ASSDHLVRAWRRTYGLPTIV 191
|
| >d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} Length = 321 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Pseudomonas aeruginosa [TaxId: 287]
Score = 36.1 bits (82), Expect = 0.002
Identities = 28/209 (13%), Positives = 63/209 (30%), Gaps = 9/209 (4%)
Query: 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK 72
+ AL+TG G ++ L + G + + R++ + +GD+
Sbjct: 1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMAD 60
Query: 73 REDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEAL 132
R V + ++ P +G +G +
Sbjct: 61 ACSVQRAVIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDG---------LGVTHLLEAIR 111
Query: 133 KYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYA 192
++ + QAS+S +I T + + AK IT + +G +
Sbjct: 112 QFSPETRFYQASTSEMFGLIQAERQDENTPFYPRSPYGVAKLYGHWITVNYRESFGLHAS 171
Query: 193 IRVNGIAPGPIKDTAGVSKLAPEEIRSKA 221
+ P++ V++ + +
Sbjct: 172 SGILFNHESPLRGIEFVTRKVTDAVARIK 200
|
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Score = 36.3 bits (83), Expect = 0.003
Identities = 43/231 (18%), Positives = 78/231 (33%), Gaps = 26/231 (11%)
Query: 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT-----VLRSAVAALHSLGIPAIGLE 67
KVAL+TG G ++ L + G + + RR + + H+
Sbjct: 2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHY 61
Query: 68 GDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIM 127
GD+ + R++ + D + N A + V SP ++D++GT +
Sbjct: 62 GDLSDTSNLTRILREV-----QPDEVYNLGAMSH-VAVSFESPEYT---ADVDAMGTLRL 112
Query: 128 CHEALKY-LKKGGR-GQASSSS-----GGIIINISATLHYTATWYQIHVSAAKAAVDSIT 180
L+K R QAS+S I + + + Y + AK IT
Sbjct: 113 LEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPR-SPY----AVAKLYAYWIT 167
Query: 181 RSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFG 231
+ +G + P + V++ I + A + G
Sbjct: 168 VNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLG 218
|
| >d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 347 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 36.2 bits (82), Expect = 0.003
Identities = 27/126 (21%), Positives = 45/126 (35%), Gaps = 10/126 (7%)
Query: 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGL-EGDVR 71
K+ L+TGG IG ++L ++G + +VA L L I E D+
Sbjct: 2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLC 61
Query: 72 KREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEA 131
R+ + + K+D V AG V P + + GT ++
Sbjct: 62 DRKGLEK-----VFKEYKIDS-VIHFAGLKAVGESTQIPLRYYHNNIL---GTVVLLELM 112
Query: 132 LKYLKK 137
+Y
Sbjct: 113 QQYNVS 118
|
| >d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Length = 338 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Escherichia coli [TaxId: 562]
Score = 36.1 bits (82), Expect = 0.003
Identities = 40/224 (17%), Positives = 71/224 (31%), Gaps = 15/224 (6%)
Query: 16 LLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGL-EGDVRKRE 74
L+TGG IG +QL ++G + I+ RS + + LG EGD+R
Sbjct: 4 LVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEA 63
Query: 75 DAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKY 134
I H +D +++ A + A S + + GT +
Sbjct: 64 LMTE-----ILHDHAIDTVIHFAG----LKAVGESVQKPLEYYDNNVNGTLRLISAMRAA 114
Query: 135 LKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIR 194
K +S++ G I + Q +K V+ I
Sbjct: 115 NVKNFIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILTD---LQKAQPDWS 171
Query: 195 VNGIAPGPI--KDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDI 236
+ + +G P+ I + Y+A G + +
Sbjct: 172 IALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSL 215
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 249 | |||
| d2c07a1 | 251 | beta-keto acyl carrier protein reductase {Malaria | 100.0 | |
| d1vl8a_ | 251 | Gluconate 5-dehydrogenase {Thermotoga maritima [Ta | 100.0 | |
| d1fmca_ | 255 | 7-alpha-hydroxysteroid dehydrogenase {Escherichia | 100.0 | |
| d1geea_ | 261 | Glucose dehydrogenase {Bacillus megaterium [TaxId: | 100.0 | |
| d2ae2a_ | 259 | Tropinone reductase {Jimsonweed (Datura stramonium | 100.0 | |
| d1zema1 | 260 | Xylitol dehydrogenase {Gluconobacter oxydans [TaxI | 100.0 | |
| d1q7ba_ | 243 | beta-keto acyl carrier protein reductase {Escheric | 100.0 | |
| d2rhca1 | 257 | beta-keto acyl carrier protein reductase {Streptom | 100.0 | |
| d1k2wa_ | 256 | Sorbitol dehydrogenase {Rhodobacter sphaeroides [T | 100.0 | |
| d2ew8a1 | 247 | (s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb | 100.0 | |
| d1xq1a_ | 259 | Tropinone reductase {Thale cress (Arabidopsis thal | 100.0 | |
| d1x1ta1 | 260 | D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas | 100.0 | |
| d1iy8a_ | 258 | Levodione reductase {Corynebacterium aquaticum [Ta | 100.0 | |
| d1gega_ | 255 | meso-2,3-butanediol dehydrogenase {Klebsiella pneu | 100.0 | |
| d1zk4a1 | 251 | R-specific alcohol dehydrogenase {Lactobacillus br | 100.0 | |
| d1nffa_ | 244 | Putative oxidoreductase Rv2002 {Mycobacterium tube | 100.0 | |
| d1ulsa_ | 242 | beta-keto acyl carrier protein reductase {Thermus | 100.0 | |
| d2d1ya1 | 248 | Hypothetical protein TTHA0369 {Thermus thermophilu | 100.0 | |
| d1edoa_ | 244 | beta-keto acyl carrier protein reductase {Oil seed | 100.0 | |
| d1hdca_ | 254 | 3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre | 100.0 | |
| d1uzma1 | 237 | beta-keto acyl carrier protein reductase {Mycobact | 100.0 | |
| d1ae1a_ | 258 | Tropinone reductase {Jimsonweed (Datura stramonium | 100.0 | |
| d1ydea1 | 250 | Retinal dehydrogenase/reductase 3 {Human (Homo sap | 100.0 | |
| d1cyda_ | 242 | Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1 | 100.0 | |
| d1hxha_ | 253 | 3beta/17beta hydroxysteroid dehydrogenase {Comamon | 100.0 | |
| d1pr9a_ | 244 | Carbonyl reductase {Human (Homo sapiens) [TaxId: 9 | 100.0 | |
| d1h5qa_ | 260 | Mannitol dehydrogenase {Mushroom (Agaricus bisporu | 100.0 | |
| d2bgka1 | 268 | Rhizome secoisolariciresinol dehydrogenase {Mayapp | 100.0 | |
| d1xkqa_ | 272 | Hypothetical protein R05D8.7 {Caenorhabditis elega | 100.0 | |
| d1yxma1 | 297 | Peroxisomal trans 2-enoyl CoA reductase {Human (Ho | 100.0 | |
| d1spxa_ | 264 | Glucose dehydrogenase (5l265) {Nematode (Caenorhab | 100.0 | |
| d2bd0a1 | 240 | Bacterial sepiapterin reductase {Chlorobium tepidu | 100.0 | |
| d1xhla_ | 274 | Hypothetical protein F25D1.5 {Caenorhabditis elega | 100.0 | |
| d1xg5a_ | 257 | Putative dehydrogenase ARPG836 (MGC4172) {Human (H | 100.0 | |
| d1ja9a_ | 259 | 1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl | 100.0 | |
| d1ulua_ | 256 | Enoyl-ACP reductase {Thermus thermophilus [TaxId: | 100.0 | |
| d1bdba_ | 276 | Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps | 100.0 | |
| d1zmta1 | 252 | Halohydrin dehalogenase HheC {Agrobacterium tumefa | 100.0 | |
| d2gdza1 | 254 | 15-hydroxyprostaglandin dehydrogenase, PGDH {Human | 100.0 | |
| d2a4ka1 | 241 | beta-keto acyl carrier protein reductase {Thermus | 100.0 | |
| d1g0oa_ | 272 | 1,3,8-trihydroxynaphtalene reductase (THNR, naphto | 100.0 | |
| d1o5ia_ | 234 | beta-keto acyl carrier protein reductase {Thermoto | 100.0 | |
| d1yb1a_ | 244 | 17-beta-hydroxysteroid dehydrogenase type XI {Huma | 100.0 | |
| d1w6ua_ | 294 | 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H | 100.0 | |
| d1gz6a_ | 302 | (3R)-hydroxyacyl-CoA dehydrogenase domain of estra | 100.0 | |
| d2ag5a1 | 245 | Dehydrogenase/reductase SDR family member 6, DHRS6 | 100.0 | |
| d1oaaa_ | 259 | Sepiapterin reductase {Mouse (Mus musculus) [TaxId | 100.0 | |
| d1sbya1 | 254 | Drosophila alcohol dehydrogenase {Fly (Drosophila | 100.0 | |
| d1jtva_ | 285 | Human estrogenic 17beta-hydroxysteroid dehydrogena | 100.0 | |
| d2o23a1 | 248 | Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho | 100.0 | |
| d1qsga_ | 258 | Enoyl-ACP reductase {Escherichia coli [TaxId: 562] | 100.0 | |
| d1wmaa1 | 275 | Carbonyl reductase/20beta-hydroxysteroid dehydroge | 100.0 | |
| d1xu9a_ | 269 | 11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom | 100.0 | |
| d1e7wa_ | 284 | Dihydropteridin reductase (pteridine reductase) {L | 100.0 | |
| d1uh5a_ | 329 | Enoyl-ACP reductase {Malaria parasite (Plasmodium | 100.0 | |
| d1d7oa_ | 297 | Enoyl-ACP reductase {Oil seed rape (Brassica napus | 100.0 | |
| d1snya_ | 248 | Carbonyl reductase sniffer {Fruit fly (Drosophila | 100.0 | |
| d2pd4a1 | 274 | Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2 | 100.0 | |
| d1yo6a1 | 250 | Putative carbonyl reductase sniffer {Caenorhabditi | 100.0 | |
| d1dhra_ | 236 | Dihydropteridin reductase (pteridine reductase) {R | 100.0 | |
| d1mxha_ | 266 | Dihydropteridin reductase (pteridine reductase) {T | 100.0 | |
| d1uaya_ | 241 | Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t | 100.0 | |
| d2h7ma1 | 268 | Enoyl-ACP reductase {Mycobacterium tuberculosis, T | 100.0 | |
| d1ooea_ | 235 | Dihydropteridin reductase (pteridine reductase) {N | 100.0 | |
| d1fjha_ | 257 | 3-alpha-hydroxysteroid dehydrogenase {Comamonas te | 100.0 | |
| d2fr1a1 | 259 | Erythromycin synthase, eryAI, 1st ketoreductase mo | 100.0 | |
| d1db3a_ | 357 | GDP-mannose 4,6-dehydratase {Escherichia coli [Tax | 99.88 | |
| d1luaa1 | 191 | Methylene-tetrahydromethanopterin dehydrogenase {M | 99.84 | |
| d1i24a_ | 393 | Sulfolipid biosynthesis protein SQD1 {Thale cress | 99.8 | |
| d1t2aa_ | 347 | GDP-mannose 4,6-dehydratase {Human (Homo sapiens) | 99.8 | |
| d1y1pa1 | 342 | Aldehyde reductase II {Sporobolomyces salmonicolor | 99.79 | |
| d1kewa_ | 361 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 99.78 | |
| d1udca_ | 338 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.77 | |
| d1rpna_ | 321 | GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos | 99.77 | |
| d1n7ha_ | 339 | GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop | 99.77 | |
| d1z45a2 | 347 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.76 | |
| d1orra_ | 338 | CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: | 99.75 | |
| d1e6ua_ | 315 | GDP-4-keto-6-deoxy-d-mannose epimerase/reductase ( | 99.73 | |
| d1sb8a_ | 341 | UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo | 99.73 | |
| d1rkxa_ | 356 | CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc | 99.73 | |
| d1oc2a_ | 346 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 99.71 | |
| d1ek6a_ | 346 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.71 | |
| d1hdoa_ | 205 | Biliverdin IX beta reductase {Human (Homo sapiens) | 99.7 | |
| d2b69a1 | 312 | UDP-glucuronate decarboxylase 1 {Human (Homo sapie | 99.7 | |
| d2c5aa1 | 363 | GDP-mannose-3', 5'-epimerase {Thale cress (Arabido | 99.69 | |
| d2blla1 | 342 | Polymyxin resistance protein ArnA (PrmI) {Escheric | 99.68 | |
| d1r6da_ | 322 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces | 99.67 | |
| d2bkaa1 | 232 | TAT-interacting protein TIP30 {Human (Homo sapiens | 99.64 | |
| d1gy8a_ | 383 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.63 | |
| d2q46a1 | 252 | Hypothetical protein At5g02240 (T7H20_290) {Thale | 99.62 | |
| d2a35a1 | 212 | Hypothetical protein PA4017 {Pseudomonas aeruginos | 99.44 | |
| d1vl0a_ | 281 | DTDP-4-dehydrorhamnose reductase RfbD {Clostridium | 99.38 | |
| d1qyca_ | 307 | Phenylcoumaran benzylic ether reductase {Loblolly | 99.37 | |
| d1qyda_ | 312 | Pinoresinol-lariciresinol reductase {Giant arborvi | 99.33 | |
| d1n2sa_ | 298 | dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S | 99.23 | |
| d1eq2a_ | 307 | ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric | 99.19 | |
| d1jaya_ | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae | 99.16 | |
| d1xgka_ | 350 | Negative transcriptional regulator NmrA {Aspergill | 99.14 | |
| d1vi2a1 | 182 | Putative shikimate dehydrogenase YdiB {Escherichia | 98.3 | |
| d1gpja2 | 159 | Glutamyl tRNA-reductase middle domain {Archaeon Me | 98.22 | |
| d1e5qa1 | 182 | Saccharopine reductase {Rice blast fungus (Magnapo | 98.2 | |
| d1v3va2 | 182 | Leukotriene b4 12-hydroxydehydrogenase/prostagland | 98.06 | |
| d1lssa_ | 132 | Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax | 98.03 | |
| d1nyta1 | 170 | Shikimate 5-dehydrogenase AroE {Escherichia coli [ | 98.01 | |
| d1gu7a2 | 189 | 2,4-dienoyl-CoA reductase {Yeast (Candida tropical | 98.0 | |
| d1yb5a2 | 174 | Quinone oxidoreductase {Human (Homo sapiens) [TaxI | 98.0 | |
| d1e3ja2 | 170 | Ketose reductase (sorbitol dehydrogenase) {Silverl | 97.97 | |
| d1ez4a1 | 146 | Lactate dehydrogenase {Lactobacillus pentosus [Tax | 97.91 | |
| d2ldxa1 | 159 | Lactate dehydrogenase {Mouse (Mus musculus) [TaxId | 97.88 | |
| d1p77a1 | 171 | Shikimate 5-dehydrogenase AroE {Haemophilus influe | 97.86 | |
| d1ldna1 | 148 | Lactate dehydrogenase {Bacillus stearothermophilus | 97.83 | |
| d1pqwa_ | 183 | Putative enoyl reductase domain of polyketide synt | 97.83 | |
| d1o8ca2 | 77 | Hypothetical protein YhdH {Escherichia coli [TaxId | 97.82 | |
| d1qora2 | 179 | Quinone oxidoreductase {Escherichia coli [TaxId: 5 | 97.82 | |
| d1xa0a2 | 176 | B. subtilis YhfP homologue {Bacillus stearothermop | 97.8 | |
| d1i0za1 | 160 | Lactate dehydrogenase {Human (Homo sapiens), heart | 97.79 | |
| d1iz0a2 | 171 | Quinone oxidoreductase {Thermus thermophilus [TaxI | 97.74 | |
| d1vj0a2 | 182 | Hypothetical protein TM0436 {Thermotoga maritima [ | 97.69 | |
| d1u7za_ | 223 | Coenzyme A biosynthesis bifunctional protein CoaBC | 97.65 | |
| d1hyha1 | 146 | L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La | 97.64 | |
| d1pzga1 | 154 | Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5 | 97.63 | |
| d2hmva1 | 134 | Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | 97.58 | |
| d1o6za1 | 142 | Malate dehydrogenase {Archaeon Haloarcula marismor | 97.58 | |
| d1mlda1 | 144 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 97.56 | |
| d1y6ja1 | 142 | Lactate dehydrogenase {Clostridium thermocellum [T | 97.56 | |
| d1pl8a2 | 171 | Ketose reductase (sorbitol dehydrogenase) {Human ( | 97.51 | |
| d1hyea1 | 145 | MJ0490, lactate/malate dehydrogenase {Archaeon Met | 97.47 | |
| d1jvba2 | 170 | Alcohol dehydrogenase {Archaeon Sulfolobus solfata | 97.45 | |
| d1llda1 | 143 | Lactate dehydrogenase {Bifidobacterium longum, str | 97.43 | |
| d1a5za1 | 140 | Lactate dehydrogenase {Thermotoga maritima [TaxId: | 97.42 | |
| d1uxja1 | 142 | Malate dehydrogenase {Chloroflexus aurantiacus [Ta | 97.42 | |
| d1t2da1 | 150 | Lactate dehydrogenase {Malaria parasite (Plasmodiu | 97.42 | |
| d7mdha1 | 175 | Malate dehydrogenase {Sorghum (Sorghum vulgare), c | 97.41 | |
| d1vj1a2 | 187 | Putative zinc-binding alcohol dehydrogenase {Mouse | 97.38 | |
| d1piwa2 | 168 | Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas | 97.35 | |
| d1y7ta1 | 154 | Malate dehydrogenase {Thermus thermophilus [TaxId: | 97.31 | |
| d1tt7a2 | 167 | Hypothetical protein YhfP {Bacillus subtilis [TaxI | 97.27 | |
| d2pv7a2 | 152 | Prephenate dehydrogenase TyrA {Haemophilus influen | 97.26 | |
| d1llua2 | 166 | Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax | 97.25 | |
| d1jqba2 | 174 | Bacterial secondary alcohol dehydrogenase {Clostri | 97.24 | |
| d1id1a_ | 153 | Rck domain from putative potassium channel Kch {Es | 97.22 | |
| d2cmda1 | 145 | Malate dehydrogenase {Escherichia coli [TaxId: 562 | 97.21 | |
| d2jfga1 | 93 | UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase | 97.2 | |
| d2pgda2 | 176 | 6-phosphogluconate dehydrogenase {Sheep (Ovis orie | 97.2 | |
| d1d1ta2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 97.19 | |
| d1o89a2 | 177 | Hypothetical protein YhdH {Escherichia coli [TaxId | 97.17 | |
| d1uufa2 | 168 | Hypothetical protein YahK {Escherichia coli [TaxId | 97.16 | |
| d1guza1 | 142 | Malate dehydrogenase {Chlorobium vibrioforme [TaxI | 97.13 | |
| d2jhfa2 | 176 | Alcohol dehydrogenase {Horse (Equus caballus) [Tax | 97.1 | |
| d1ojua1 | 142 | Malate dehydrogenase {Archaeon Archaeoglobus fulgi | 97.08 | |
| d1npya1 | 167 | Shikimate 5-dehydrogenase-like protein HI0607 {Hae | 97.07 | |
| d1p0fa2 | 174 | Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: | 97.05 | |
| d1f8fa2 | 174 | Benzyl alcohol dehydrogenase {Acinetobacter calcoa | 97.01 | |
| d1e3ia2 | 174 | Alcohol dehydrogenase {Mouse (Mus musculus), class | 96.97 | |
| d2f1ka2 | 165 | Prephenate dehydrogenase TyrA {Synechocystis sp. p | 96.96 | |
| d1pjqa1 | 113 | Siroheme synthase CysG, domain 1 {Salmonella typhi | 96.94 | |
| d2fzwa2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 96.85 | |
| d5mdha1 | 154 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 96.83 | |
| d1nvta1 | 177 | Shikimate 5-dehydrogenase AroE {Archaeon Methanoco | 96.82 | |
| d1f0ya2 | 192 | Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum | 96.8 | |
| d1bg6a2 | 184 | N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A | 96.76 | |
| d1rjwa2 | 168 | Alcohol dehydrogenase {Bacillus stearothermophilus | 96.74 | |
| d1c1da1 | 201 | Phenylalanine dehydrogenase {Rhodococcus sp., M4 [ | 96.73 | |
| d1pjca1 | 168 | L-alanine dehydrogenase {Phormidium lapideum [TaxI | 96.66 | |
| d1wdka3 | 186 | Fatty oxidation complex alpha subunit, middle doma | 96.63 | |
| d1cdoa2 | 175 | Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI | 96.63 | |
| d1h2ba2 | 172 | Alcohol dehydrogenase {Archaeon Aeropyrum pernix [ | 96.57 | |
| d1kola2 | 195 | Formaldehyde dehydrogenase {Pseudomonas putida [Ta | 96.54 | |
| d1kyqa1 | 150 | Bifunctional dehydrogenase/ferrochelatase Met8p, N | 96.41 | |
| d1jw9b_ | 247 | Molybdenum cofactor biosynthesis protein MoeB {Esc | 96.39 | |
| d1vpda2 | 161 | Hydroxyisobutyrate dehydrogenase {Salmonella typhi | 96.36 | |
| d1leha1 | 230 | Leucine dehydrogenase {Bacillus sphaericus [TaxId: | 96.19 | |
| d1wy7a1 | 201 | Hypothetical protein PH1948 {Archaeon Pyrococcus h | 96.15 | |
| d2g5ca2 | 171 | Prephenate dehydrogenase TyrA {Aquifex aeolicus [T | 96.14 | |
| d3cuma2 | 162 | Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru | 96.09 | |
| d1kjqa2 | 111 | Glycinamide ribonucleotide transformylase PurT, N- | 96.07 | |
| d1p9oa_ | 290 | Phosphopantothenoylcysteine synthetase {Human (Hom | 96.03 | |
| d1b0aa1 | 166 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 96.03 | |
| d1yovb1 | 426 | UBA3 {Human (Homo sapiens) [TaxId: 9606]} | 95.97 | |
| d1a4ia1 | 170 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 95.93 | |
| d2fy8a1 | 129 | Potassium channel-related protein MthK {Archaeon M | 95.87 | |
| d1j4aa1 | 197 | D-lactate dehydrogenase {Lactobacillus helveticus | 95.86 | |
| d1pgja2 | 178 | 6-phosphogluconate dehydrogenase {Trypanosoma bruc | 95.84 | |
| d1p3da1 | 96 | UDP-N-acetylmuramate-alanine ligase MurC {Haemophi | 95.79 | |
| d1vm6a3 | 128 | Dihydrodipicolinate reductase {Thermotoga maritima | 95.77 | |
| d1ygya1 | 184 | Phosphoglycerate dehydrogenase {Mycobacterium tube | 95.77 | |
| d1l7da1 | 183 | Nicotinamide nucleotide transhydrogenase dI compon | 95.76 | |
| d1ks9a2 | 167 | Ketopantoate reductase PanE {Escherichia coli [Tax | 95.76 | |
| d1dxya1 | 199 | D-2-hydroxyisocaproate dehydrogenase {Lactobacillu | 95.62 | |
| d1edza1 | 171 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 95.6 | |
| d1ebda2 | 117 | Dihydrolipoamide dehydrogenase {Bacillus stearothe | 95.59 | |
| d1d7ya2 | 121 | NADH-dependent ferredoxin reductase, BphA4 {Pseudo | 95.59 | |
| d1mx3a1 | 193 | Transcription corepressor CtbP {Human (Homo sapien | 95.52 | |
| d1nhpa2 | 123 | NADH peroxidase {Enterococcus faecalis [TaxId: 135 | 95.48 | |
| d1ne2a_ | 197 | Hypothetical protein Ta1320 {Archaeon Thermoplasma | 95.44 | |
| d1v59a2 | 122 | Dihydrolipoamide dehydrogenase {Baker's yeast (Sac | 95.34 | |
| d1m6ya2 | 192 | TM0872, methyltransferase domain {Thermotoga marit | 95.34 | |
| d1yl7a1 | 135 | Dihydrodipicolinate reductase {Mycobacterium tuber | 95.3 | |
| d1yqga2 | 152 | Pyrroline-5-carboxylate reductase ProC {Neisseria | 95.28 | |
| d1sc6a1 | 188 | Phosphoglycerate dehydrogenase {Escherichia coli [ | 95.24 | |
| d1pjza_ | 201 | Thiopurine S-methyltransferase {Pseudomonas syring | 95.11 | |
| d1onfa2 | 117 | Glutathione reductase {Plasmodium falciparum [TaxI | 95.06 | |
| d1wzna1 | 251 | Hypothetical methyltransferase PH1305 {Archaeon Py | 95.04 | |
| d1gesa2 | 116 | Glutathione reductase {Escherichia coli [TaxId: 56 | 95.0 | |
| d2d59a1 | 139 | Hypothetical protein PH1109 {Pyrococcus horikoshii | 94.98 | |
| d3grsa2 | 125 | Glutathione reductase {Human (Homo sapiens) [TaxId | 94.97 | |
| d1li4a1 | 163 | S-adenosylhomocystein hydrolase {Human (Homo sapie | 94.78 | |
| d1djqa2 | 156 | Trimethylamine dehydrogenase, C-terminal domain {M | 94.69 | |
| d3lada2 | 119 | Dihydrolipoamide dehydrogenase {Azotobacter vinela | 94.66 | |
| d1xhca2 | 122 | NADH oxidase /nitrite reductase {Pyrococcus furios | 94.6 | |
| d2naca1 | 188 | Formate dehydrogenase {Pseudomonas sp., strain 101 | 94.55 | |
| d1y8ca_ | 246 | Putative methyltransferase CAC2371 {Clostridium ac | 94.55 | |
| d2nxca1 | 254 | PrmA-like protein TTHA0656 (TT0836) {Thermus therm | 94.54 | |
| d1lvla2 | 115 | Dihydrolipoamide dehydrogenase {Pseudomonas putida | 94.44 | |
| d1u8xx1 | 167 | Maltose-6'-phosphate glucosidase GlvA {Bacillus su | 94.43 | |
| d1n1ea2 | 189 | Glycerol-3- phosphate dehydrogenase {Trypanosome ( | 94.42 | |
| d1dxla2 | 123 | Dihydrolipoamide dehydrogenase {Garden pea (Pisum | 94.41 | |
| d1c0pa1 | 268 | D-aminoacid oxidase, N-terminal domain {Rhodotorul | 94.38 | |
| d2ahra2 | 152 | Pyrroline-5-carboxylate reductase ProC {Streptococ | 94.32 | |
| d1j6ua1 | 89 | UDP-N-acetylmuramate-alanine ligase MurC {Thermoto | 94.31 | |
| d2fr1a2 | 209 | Erythromycin synthase, eryAI, 1st ketoreductase mo | 94.12 | |
| d1qp8a1 | 181 | Putative formate dehydrogenase {Archaeon Pyrobacul | 94.04 | |
| d1mo9a2 | 121 | NADH-dependent 2-ketopropyl coenzyme M oxidoreduct | 94.02 | |
| d1h6va2 | 122 | Mammalian thioredoxin reductase {Rat (Rattus norve | 94.0 | |
| d1jg1a_ | 215 | Protein-L-isoaspartyl O-methyltransferase {Archaeo | 94.0 | |
| d1yova1 | 529 | Amyloid beta precursor protein-binding protein 1, | 93.9 | |
| d1q1ra2 | 133 | Putidaredoxin reductase {Pseudomonas putida [TaxId | 93.89 | |
| d1ve3a1 | 226 | Hypothetical protein PH0226 {Archaeon Pyrococcus h | 93.82 | |
| d1l3ia_ | 186 | Precorrin-6Y methyltransferase (CbiT) {Archaeon Me | 93.73 | |
| d1wxxa2 | 318 | Hypothetical protein TTHA1280, middle and C-termin | 93.73 | |
| d2esra1 | 152 | Putative methyltransferase SPy1538 {Streptococcus | 93.67 | |
| d1ps9a3 | 179 | 2,4-dienoyl-CoA reductase, middle domain {Escheric | 93.58 | |
| d2bzga1 | 229 | Thiopurine S-methyltransferase {Human (Homo sapien | 93.57 | |
| d1v8ba1 | 163 | S-adenosylhomocystein hydrolase {Plasmodium falcip | 93.38 | |
| d1y81a1 | 116 | Hypothetical protein PF0725 {Pyrococcus furiosus [ | 93.37 | |
| d1q0qa2 | 151 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase {E | 93.34 | |
| d1byia_ | 224 | Dethiobiotin synthetase {Escherichia coli [TaxId: | 93.27 | |
| d1ojta2 | 125 | Dihydrolipoamide dehydrogenase {Neisseria meningit | 93.16 | |
| d1gtea4 | 196 | Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su | 93.09 | |
| d1i36a2 | 152 | Conserved hypothetical protein MTH1747 {Archaeon M | 92.98 | |
| d2fyta1 | 311 | Protein arginine N-methyltransferase 3, PRMT3 {Hum | 92.96 | |
| d1seza1 | 373 | Protoporphyrinogen oxidase {Tobacco (Nicotiana tab | 92.95 | |
| d1nv8a_ | 271 | N5-glutamine methyltransferase, HemK {Thermotoga m | 92.92 | |
| d1u0sy_ | 118 | CheY protein {Thermotoga maritima [TaxId: 2336]} | 92.9 | |
| d1bgva1 | 255 | Glutamate dehydrogenase {Clostridium symbiosum [Ta | 92.89 | |
| d2as0a2 | 324 | Hypothetical protein PH1915, middle and C-terminal | 92.84 | |
| d1r0ka2 | 150 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z | 92.7 | |
| d1txga2 | 180 | Glycerol-3- phosphate dehydrogenase {Archaeoglobus | 92.68 | |
| d2i6ga1 | 198 | Putative methyltransferase TehB {Salmonella typhim | 92.61 | |
| d1v9la1 | 242 | Glutamate dehydrogenase {Pyrobaculum islandicum [T | 92.57 | |
| d1b26a1 | 234 | Glutamate dehydrogenase {Thermotoga maritima [TaxI | 92.47 | |
| d1gdha1 | 191 | D-glycerate dehydrogenase {Hyphomicrobium methylov | 92.44 | |
| d1aoga2 | 117 | Trypanothione reductase {Trypanosoma cruzi [TaxId: | 92.33 | |
| d1dl5a1 | 213 | Protein-L-isoaspartyl O-methyltransferase {Thermot | 92.21 | |
| d2cvza2 | 156 | Hydroxyisobutyrate dehydrogenase {Thermus thermoph | 92.19 | |
| d1g3qa_ | 237 | Cell division regulator MinD {Archaeon Pyrococcus | 92.19 | |
| d1hwxa1 | 293 | Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: | 92.12 | |
| d1up7a1 | 162 | 6-phospho-beta-glucosidase {Thermotoga maritima [T | 92.09 | |
| d2csua1 | 129 | Acetate-CoA ligase alpha chain, AcdA, N-terminal d | 91.98 | |
| d1mv8a2 | 202 | GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos | 91.97 | |
| d2b78a2 | 317 | Hypothetical protein SMu776, middle and C-terminal | 91.97 | |
| d1ryia1 | 276 | Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} | 91.8 | |
| d1ws6a1 | 171 | Methyltransferase TTHA0928 {Thermus thermophilus [ | 91.78 | |
| d1ihua2 | 279 | Arsenite-translocating ATPase ArsA {Escherichia co | 91.77 | |
| d1fcda1 | 186 | Flavocytochrome c sulfide dehydrogenase, FCSD, fla | 91.68 | |
| d2voua1 | 265 | Dihydroxypyridine hydroxylase DhpH {Arthrobacter n | 91.31 | |
| d1iuka_ | 136 | Hypothetical protein TT1466 {Thermus thermophilus | 91.26 | |
| d1djqa3 | 233 | Trimethylamine dehydrogenase, middle domain {Methy | 91.23 | |
| d2iida1 | 370 | L-aminoacid oxidase {Malayan pit viper (Calloselas | 91.11 | |
| d1hyqa_ | 232 | Cell division regulator MinD {Archaeon Archaeoglob | 90.95 | |
| d1vl5a_ | 231 | Hypothetical protein BH2331 {Bacillus halodurans [ | 90.41 | |
| d1vbfa_ | 224 | Protein-L-isoaspartyl O-methyltransferase {Sulfolo | 90.4 | |
| d2fhpa1 | 182 | Putative methylase EF2452 {Enterococcus faecalis [ | 90.4 | |
| d1i1na_ | 224 | Protein-L-isoaspartyl O-methyltransferase {Human ( | 90.3 | |
| d1oria_ | 316 | Protein arginine N-methyltransferase 1, PRMT1 {Rat | 90.26 | |
| d2igta1 | 309 | Putative methyltransferase Atu0340 {Agrobacterium | 89.91 | |
| d1gtma1 | 239 | Glutamate dehydrogenase {Archaeon Pyrococcus furio | 89.9 | |
| d2gv8a2 | 107 | Flavin-dependent monoxygenase SPBP16F5.08c {Schizo | 89.68 | |
| d2bi7a1 | 314 | UDP-galactopyranose mutase, N-terminal domain {Kle | 89.56 | |
| d2gf3a1 | 281 | Sarcosine oxidase {Bacillus sp., strain b0618 [Tax | 89.29 | |
| d1cp2a_ | 269 | Nitrogenase iron protein {Clostridium pasteurianum | 89.03 | |
| d1a9xa3 | 127 | Carbamoyl phosphate synthetase (CPS), large subuni | 88.85 | |
| d1feca2 | 117 | Trypanothione reductase {Crithidia fasciculata [Ta | 88.5 | |
| d1pj5a2 | 305 | N,N-dimethylglycine oxidase {Arthrobacter globifor | 88.47 | |
| d1g6q1_ | 328 | Arginine methyltransferase, HMT1 {Baker's yeast (S | 88.4 | |
| d1a9xa4 | 121 | Carbamoyl phosphate synthetase (CPS), large subuni | 88.36 | |
| d2bcgg1 | 297 | Guanine nucleotide dissociation inhibitor, GDI {Ba | 88.09 | |
| d1diha1 | 162 | Dihydrodipicolinate reductase {Escherichia coli [T | 88.09 | |
| d1qkia1 | 203 | Glucose 6-phosphate dehydrogenase, N-terminal doma | 87.83 | |
| d1m1na_ | 477 | Nitrogenase iron-molybdenum protein, alpha chain { | 87.68 | |
| d1vb3a1 | 428 | Threonine synthase {Escherichia coli [TaxId: 562]} | 87.42 | |
| d1vbka1 | 132 | Hypothetical protein PH1313, C-terminal domain {Ar | 87.3 | |
| d2ivda1 | 347 | Protoporphyrinogen oxidase {Myxococcus xanthus [Ta | 87.11 | |
| d1xxla_ | 234 | Hypothetical protein YcgJ {Bacillus subtilis [TaxI | 86.98 | |
| d1f0ka_ | 351 | Peptidoglycan biosynthesis glycosyltransferase Mur | 86.57 | |
| d2csua3 | 163 | Acetate-CoA ligase alpha chain, AcdA, domains 2 an | 86.56 | |
| d2fpoa1 | 183 | Methylase YhhF {Escherichia coli [TaxId: 562]} | 86.23 | |
| d1nt2a_ | 209 | Fibrillarin homologue {Archaeon Archaeoglobus fulg | 86.05 | |
| d2hjsa1 | 144 | Usg-1 protein homolog PA3116 {Pseudomonas aerugino | 86.03 | |
| d1xvaa_ | 292 | Glycine N-methyltransferase {Rat (Rattus norvegicu | 85.97 | |
| d1wg8a2 | 182 | TM0872, methyltransferase domain {Thermus thermoph | 85.9 | |
| d1k0ia1 | 292 | p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a | 85.81 | |
| d2b3ta1 | 274 | N5-glutamine methyltransferase, HemK {Escherichia | 85.78 | |
| d1gtea3 | 153 | Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su | 85.55 | |
| d1m6ia2 | 137 | Apoptosis-inducing factor (AIF) {Human (Homo sapie | 85.54 | |
| d1d5ta1 | 336 | Guanine nucleotide dissociation inhibitor, GDI {Co | 85.26 | |
| d1krwa_ | 123 | NTRC receiver domain {Salmonella typhimurium [TaxI | 85.09 | |
| d2i0za1 | 251 | Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396] | 84.99 | |
| d1inla_ | 295 | Spermidine synthase {Thermotoga maritima [TaxId: 2 | 84.99 | |
| d2b2ca1 | 312 | Spermidine synthase {Caenorhabditis elegans [TaxId | 84.85 | |
| d1q1ra1 | 185 | Putidaredoxin reductase {Pseudomonas putida [TaxId | 84.71 | |
| d1dusa_ | 194 | Hypothetical protein MJ0882 {Archaeon Methanococcu | 84.23 | |
| d1r18a_ | 223 | Protein-L-isoaspartyl O-methyltransferase {Fruit f | 84.13 | |
| d1gesa1 | 217 | Glutathione reductase {Escherichia coli [TaxId: 56 | 83.71 | |
| d1t4ba1 | 146 | Aspartate beta-semialdehyde dehydrogenase {Escheri | 83.57 | |
| d1xj5a_ | 290 | Spermidine synthase {Thale cress (Arabidopsis thal | 83.29 | |
| d2gqfa1 | 253 | Hypothetical protein HI0933 {Haemophilus influenza | 83.2 | |
| d2o57a1 | 282 | Putative sarcosine dimethylglycine methyltransfera | 83.18 | |
| d2dw4a2 | 449 | Lysine-specific histone demethylase 1, LSD1 {Human | 83.12 | |
| d2i76a2 | 153 | Hypothetical protein TM1727 {Thermotoga maritima [ | 83.11 | |
| d1y0pa2 | 308 | Flavocytochrome c3 (respiratory fumarate reductase | 82.84 | |
| d1pn3a_ | 391 | TDP-epi-vancosaminyltransferase GtfA {Amycolatopsi | 82.71 | |
| d1w4xa2 | 235 | Phenylacetone monooxygenase {Thermobifida fusca [T | 82.68 | |
| d1nkva_ | 245 | Hypothetical Protein YjhP {Escherichia coli [TaxId | 82.48 | |
| d1mjfa_ | 276 | Putative spermidine synthetase PF0127 (SpeE) {Arch | 82.41 | |
| d1dxla1 | 221 | Dihydrolipoamide dehydrogenase {Garden pea (Pisum | 82.3 | |
| d1c4oa2 | 174 | Nucleotide excision repair enzyme UvrB {Thermus th | 82.28 | |
| d1v71a1 | 318 | Hypothetical protein C320.14 (SPCC320.14, SPCC330. | 82.25 | |
| d1yb2a1 | 250 | Hypothetical protein Ta0852 {Thermoplasma acidophi | 82.2 | |
| d2p7ia1 | 225 | Hypothetical protein ECA1738 {Erwinia carotovora [ | 82.06 | |
| d1vkna1 | 176 | N-acetyl-gamma-glutamyl-phosphate reductase ArgC { | 81.75 | |
| d1i8ta1 | 298 | UDP-galactopyranose mutase, N-terminal domain {Esc | 81.72 | |
| d1v59a1 | 233 | Dihydrolipoamide dehydrogenase {Baker's yeast (Sac | 81.48 | |
| d1dlja2 | 196 | UDP-glucose dehydrogenase (UDPGDH) {Streptococcus | 81.46 | |
| d1xk7a1 | 402 | Crotonobetainyl-CoA:carnitine CoA-transferase, Cai | 81.17 | |
| d2gh1a1 | 281 | Methyltransferase BC2162 {Bacillus cereus [TaxId: | 81.12 | |
| d1kl7a_ | 511 | Threonine synthase {Baker's yeast (Saccharomyces c | 81.03 | |
| d1ydhb_ | 181 | Hypothetical protein At5g11950 {Thale cress (Arabi | 81.01 | |
| d1trba1 | 190 | Thioredoxin reductase {Escherichia coli [TaxId: 56 | 81.0 | |
| d1ydwa1 | 184 | Probable oxidoreductase At4g09670 {Thale cress (Ar | 80.95 | |
| d2afhe1 | 289 | Nitrogenase iron protein {Azotobacter vinelandii [ | 80.53 | |
| d2o07a1 | 285 | Spermidine synthase {Human (Homo sapiens) [TaxId: | 80.29 | |
| d1jyea_ | 271 | Lac-repressor (lacR) core (C-terminal domain) {Esc | 80.28 | |
| d1h9aa1 | 195 | Glucose 6-phosphate dehydrogenase, N-terminal doma | 80.27 | |
| d1trba2 | 126 | Thioredoxin reductase {Escherichia coli [TaxId: 56 | 80.03 |
| >d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=100.00 E-value=2.5e-56 Score=361.01 Aligned_cols=232 Identities=30% Similarity=0.360 Sum_probs=215.5
Q ss_pred CCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHH
Q 025672 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (249)
Q Consensus 7 ~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 86 (249)
.+.|++|++|||||++|||+++|++|+++|++|++++|+++.++++.+++...+.++.++++|++|+++++++++++.++
T Consensus 5 ~f~lenKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~ 84 (251)
T d2c07a1 5 YYCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTE 84 (251)
T ss_dssp CCCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred ccCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHh
Confidence 35688999999999999999999999999999999999999999999999988889999999999999999999999999
Q ss_pred hCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccc
Q 025672 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ 166 (249)
Q Consensus 87 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~ 166 (249)
+|++|++|||||.....++.+.+.++|++++++|+.++++++|+++|.|.+++. |+||++||..+..+.++.
T Consensus 85 ~g~iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~--------G~IVnisS~~~~~~~~~~ 156 (251)
T d2c07a1 85 HKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRY--------GRIINISSIVGLTGNVGQ 156 (251)
T ss_dssp CSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTC--------EEEEEECCTHHHHCCTTC
T ss_pred cCCceeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCCC--------eEEEEECCHHhcCCCCCC
Confidence 999999999999988889999999999999999999999999999999998764 999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhccC
Q 025672 167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246 (249)
Q Consensus 167 ~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~ 246 (249)
.+|++||+|+.+|+|+|++||+ ++|||||+|+||+|+|++... . +++..+.+.+.+|++|+++|||+|+++.||+||
T Consensus 157 ~~Y~asKaal~~ltr~lA~el~-~~gIrVN~V~PG~v~T~~~~~-~-~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~ 233 (251)
T d2c07a1 157 ANYSSSKAGVIGFTKSLAKELA-SRNITVNAIAPGFISSDMTDK-I-SEQIKKNIISNIPAGRMGTPEEVANLACFLSSD 233 (251)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCC------C-CHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHHHHHHHHHHhh-hhCeEEEEEccCCEecccccc-c-CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCc
Confidence 9999999999999999999999 999999999999999876433 2 456777888899999999999999999999999
Q ss_pred CCC
Q 025672 247 AGQ 249 (249)
Q Consensus 247 ~a~ 249 (249)
+++
T Consensus 234 ~s~ 236 (251)
T d2c07a1 234 KSG 236 (251)
T ss_dssp GGT
T ss_pred hhC
Confidence 874
|
| >d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Gluconate 5-dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=2.3e-56 Score=361.06 Aligned_cols=233 Identities=33% Similarity=0.487 Sum_probs=214.8
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHH-hcCCCeeEEEccCCCHHHHHHHHHHHHHH
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALH-SLGIPAIGLEGDVRKREDAVRVVESTINH 86 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 86 (249)
.+|+||++|||||++|||+++|++|+++|++|++++|+.+++++..+++. ..+.++.++++|++|+++++++++++.++
T Consensus 1 f~l~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~ 80 (251)
T d1vl8a_ 1 FDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEK 80 (251)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 46899999999999999999999999999999999999999998888875 45778999999999999999999999999
Q ss_pred hCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccc-ccCcc
Q 025672 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY-TATWY 165 (249)
Q Consensus 87 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~-~~~~~ 165 (249)
+|+||++|||||.....++.+.+.++|++.+++|+.++++++|+++|.|.+++. |+||+++|..+. .+.++
T Consensus 81 ~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~--------G~Ii~i~S~~~~~~~~~~ 152 (251)
T d1vl8a_ 81 FGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDN--------PSIINIGSLTVEEVTMPN 152 (251)
T ss_dssp HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSS--------CEEEEECCGGGTCCCSSS
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhccccccc--------ccccccccchhccccCcc
Confidence 999999999999988899999999999999999999999999999999988764 899999997664 46778
Q ss_pred chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhcc
Q 025672 166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245 (249)
Q Consensus 166 ~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s 245 (249)
...|+++|+|+.+|+|+|+.|++ ++|||||+|+||+|+|++.......++..+.+.+.+|++|+++|||||++++||+|
T Consensus 153 ~~~Y~asKaal~~lt~~lA~e~~-~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S 231 (251)
T d1vl8a_ 153 ISAYAASKGGVASLTKALAKEWG-RYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPLGRTGVPEDLKGVAVFLAS 231 (251)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECCBCSTTTHHHHTCHHHHHHHHHTCTTSSCBCGGGGHHHHHHHHS
T ss_pred ccchHHHHHhHHHHHHHHHHHhc-ccCeEEEEEeeCcccCHHHHhccCCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhC
Confidence 89999999999999999999999 99999999999999988766555556677788889999999999999999999999
Q ss_pred CCCC
Q 025672 246 DAGQ 249 (249)
Q Consensus 246 ~~a~ 249 (249)
|+++
T Consensus 232 ~~a~ 235 (251)
T d1vl8a_ 232 EEAK 235 (251)
T ss_dssp GGGT
T ss_pred chhC
Confidence 9874
|
| >d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 7-alpha-hydroxysteroid dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=3e-56 Score=361.18 Aligned_cols=233 Identities=30% Similarity=0.460 Sum_probs=216.9
Q ss_pred CCCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHH
Q 025672 6 KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN 85 (249)
Q Consensus 6 ~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 85 (249)
..+.|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++.+.+.++.+++||++|+++++++++++.+
T Consensus 5 d~m~L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~ 84 (255)
T d1fmca_ 5 DNLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAIS 84 (255)
T ss_dssp GGGCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 35678999999999999999999999999999999999999999999999998888999999999999999999999999
Q ss_pred HhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCcc
Q 025672 86 HFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY 165 (249)
Q Consensus 86 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~ 165 (249)
++|++|++|||||+....++ +.+.++|++.+++|+.++++++|+++|.|.+++. |+||++||..+..+.++
T Consensus 85 ~~g~iDilvnnAG~~~~~~~-e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~--------g~Ii~isS~~~~~~~~~ 155 (255)
T d1fmca_ 85 KLGKVDILVNNAGGGGPKPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGG--------GVILTITSMAAENKNIN 155 (255)
T ss_dssp HHSSCCEEEECCCCCCCCCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--------EEEEEECCGGGTCCCTT
T ss_pred HcCCCCEeeeCCcCCCCCcc-cCCHHHHHHHHHHHHHHhhhhHHHHHhhhccccc--------cccccccccchhccccc
Confidence 99999999999998877766 7899999999999999999999999999998764 89999999999999999
Q ss_pred chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhcc
Q 025672 166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245 (249)
Q Consensus 166 ~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s 245 (249)
..+|++||+|+.+|+|+||.|++ ++|||||+|+||+|+|++..... +++..+.+.+.+|++|+++|||||++++||+|
T Consensus 156 ~~~Y~asKaal~~lt~~lA~el~-~~gIrVN~I~PG~i~T~~~~~~~-~~e~~~~~~~~~pl~R~g~pedvA~~v~fL~S 233 (255)
T d1fmca_ 156 MTSYASSKAAASHLVRNMAFDLG-EKNIRVNGIAPGAILTDALKSVI-TPEIEQKMLQHTPIRRLGQPQDIANAALFLCS 233 (255)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHH-TTTEEEEEEEECSBCSHHHHTTC-CHHHHHHHHHTCSSCSCBCHHHHHHHHHHHHS
T ss_pred cccchhHHHHHHHHHHHHHHHhC-ccCeEEEEeeeCcCcChHhhccC-CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC
Confidence 99999999999999999999999 99999999999999987665544 44566778889999999999999999999999
Q ss_pred CCCC
Q 025672 246 DAGQ 249 (249)
Q Consensus 246 ~~a~ 249 (249)
|+++
T Consensus 234 ~~s~ 237 (255)
T d1fmca_ 234 PAAS 237 (255)
T ss_dssp GGGT
T ss_pred chhc
Confidence 9864
|
| >d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase species: Bacillus megaterium [TaxId: 1404]
Probab=100.00 E-value=2.4e-56 Score=362.78 Aligned_cols=233 Identities=30% Similarity=0.481 Sum_probs=216.8
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcc-hHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT-VLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~-~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
+|+||++|||||++|||+++|++|+++|++|++++|+.+ .++++.+++...+.++.+++||++|+++++++++++.+++
T Consensus 4 dL~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~ 83 (261)
T d1geea_ 4 DLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEF 83 (261)
T ss_dssp GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 689999999999999999999999999999999999854 6788899998888899999999999999999999999999
Q ss_pred CCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch
Q 025672 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 167 (249)
Q Consensus 88 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~ 167 (249)
|+||++|||||+....++.+.+.++|++.+++|+.++++++|+++|.|.+++. +++||++||..+..+.++..
T Consensus 84 G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~-------g~~Iv~isS~~~~~~~~~~~ 156 (261)
T d1geea_ 84 GKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDI-------KGTVINMSSVHEKIPWPLFV 156 (261)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTC-------CCEEEEECCGGGTSCCTTCH
T ss_pred CCCCEeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccc-------cccccccccchhcccCcccc
Confidence 99999999999988889999999999999999999999999999999987754 46699999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhccCC
Q 025672 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247 (249)
Q Consensus 168 ~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~ 247 (249)
+|++||+|+.+|+|+|+.||+ ++|||||+|+||+|+|++......+++..+.+.+.+|++|+++|||||++++||+||+
T Consensus 157 ~Y~asKaal~~lt~~lA~e~~-~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~R~~~pediA~~v~fL~S~~ 235 (261)
T d1geea_ 157 HYAASKGGMKLMTETLALEYA-PKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPEEIAAVAAWLASSE 235 (261)
T ss_dssp HHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECSBCSGGGHHHHHSHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGG
T ss_pred ccccCCccchhhHHHHHHHhh-hhCcEEEEEeeCcCcCHhHhhhcCCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCch
Confidence 999999999999999999999 9999999999999998876555545667778888999999999999999999999998
Q ss_pred CC
Q 025672 248 GQ 249 (249)
Q Consensus 248 a~ 249 (249)
++
T Consensus 236 s~ 237 (261)
T d1geea_ 236 AS 237 (261)
T ss_dssp GT
T ss_pred hc
Confidence 64
|
| >d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), II [TaxId: 4076]
Probab=100.00 E-value=6.8e-56 Score=360.00 Aligned_cols=234 Identities=29% Similarity=0.412 Sum_probs=217.2
Q ss_pred CCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHH
Q 025672 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (249)
Q Consensus 7 ~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 86 (249)
+++|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++...+.++.+++||++|+++++++++++.++
T Consensus 3 ~f~L~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~ 82 (259)
T d2ae2a_ 3 RWNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANH 82 (259)
T ss_dssp TTCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CcCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHH
Confidence 46899999999999999999999999999999999999999999999999988889999999999999999999999999
Q ss_pred hC-CccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCcc
Q 025672 87 FG-KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY 165 (249)
Q Consensus 87 ~~-~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~ 165 (249)
++ ++|++|||||+....++.+.+.++|++++++|+.++++++++++|.|.++.. |+||++||..+..+.++
T Consensus 83 ~~~~idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~--------G~Ii~isS~~~~~~~~~ 154 (259)
T d2ae2a_ 83 FHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASER--------GNVVFISSVSGALAVPY 154 (259)
T ss_dssp TTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSS--------EEEEEECCGGGTSCCTT
T ss_pred hCCCceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhcc--------ccccccccccccccccc
Confidence 86 8999999999988889999999999999999999999999999999998764 99999999999999999
Q ss_pred chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCC---hHHHHHhhhhhhcccCCCCHHHHHHHHHH
Q 025672 166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA---PEEIRSKATDYMAAYKFGEKWDIAMAALY 242 (249)
Q Consensus 166 ~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~dva~~v~~ 242 (249)
...|+++|+|+.+|+|++++||+ ++|||||+|+||+|+|++...... .++..+.+.+.+|++|+++|||||++++|
T Consensus 155 ~~~Y~asKaal~~lt~~lA~el~-~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~pedvA~~v~f 233 (259)
T d2ae2a_ 155 EAVYGATKGAMDQLTRCLAFEWA-KDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVAF 233 (259)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTG-GGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTSTTCSCBCHHHHHHHHHH
T ss_pred ccchHHHHHHHHHHHHHHHHHhC-cCceEEEEeeeCcccCHHHHhhhhchhhHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence 99999999999999999999999 999999999999999886543332 23455667788999999999999999999
Q ss_pred hccCCCC
Q 025672 243 LASDAGQ 249 (249)
Q Consensus 243 l~s~~a~ 249 (249)
|+||+++
T Consensus 234 L~S~~s~ 240 (259)
T d2ae2a_ 234 LCFPAAS 240 (259)
T ss_dssp HHSGGGT
T ss_pred HhCchhC
Confidence 9999864
|
| >d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Xylitol dehydrogenase species: Gluconobacter oxydans [TaxId: 442]
Probab=100.00 E-value=1.5e-55 Score=358.33 Aligned_cols=232 Identities=26% Similarity=0.414 Sum_probs=216.4
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhC
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 88 (249)
.|+||++|||||++|||+++|++|+++|++|++++|+++.++++.+++...+.++.++.||++|+++++++++++.+++|
T Consensus 2 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 81 (260)
T d1zema1 2 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFG 81 (260)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 47999999999999999999999999999999999999999999999998888999999999999999999999999999
Q ss_pred CccEEEEcCCCCC-CCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch
Q 025672 89 KLDILVNAAAGNF-LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 167 (249)
Q Consensus 89 ~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~ 167 (249)
++|++|||||... ..++.+.+.++|++.+++|+.++++++++++|.|.++.. |+||++||..+..+.++..
T Consensus 82 ~iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~--------G~II~isS~~~~~~~~~~~ 153 (260)
T d1zema1 82 KIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNY--------GRIVNTASMAGVKGPPNMA 153 (260)
T ss_dssp CCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--------EEEEEECCHHHHSCCTTBH
T ss_pred CCCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhcC--------CCCCeeechhhccCCcchH
Confidence 9999999999875 478999999999999999999999999999999988764 9999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccccccc--------------CCCChHHHHHhhhhhhcccCCCCH
Q 025672 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGV--------------SKLAPEEIRSKATDYMAAYKFGEK 233 (249)
Q Consensus 168 ~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~ 233 (249)
.|+++|+|+.+|+|+|+.||+ ++|||||+|+||+|+|++.. ....++...+.+...+|++|+++|
T Consensus 154 ~Y~asKaal~~ltk~lA~el~-~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~p 232 (260)
T d1zema1 154 AYGTSKGAIIALTETAALDLA-PYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDI 232 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTSTTSSCBCG
T ss_pred HHHHHHHHHHHHHHHHHHHhh-hhCCEEEEeccCcccCcchhhcchhhhhhhcccccccCHHHHHHHHHhcCCCCCCcCH
Confidence 999999999999999999999 99999999999999987532 223456777888899999999999
Q ss_pred HHHHHHHHHhccCCCC
Q 025672 234 WDIAMAALYLASDAGQ 249 (249)
Q Consensus 234 ~dva~~v~~l~s~~a~ 249 (249)
||||+++.||+||+++
T Consensus 233 edvA~~v~fL~S~~s~ 248 (260)
T d1zema1 233 NEIPGVVAFLLGDDSS 248 (260)
T ss_dssp GGSHHHHHHHHSGGGT
T ss_pred HHHHHHHHHHhCchhc
Confidence 9999999999999874
|
| >d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=9.6e-56 Score=355.75 Aligned_cols=227 Identities=27% Similarity=0.324 Sum_probs=210.5
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhC
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 88 (249)
+|+||+++||||++|||+++|++|+++|++|++++|+++.++++.+++. .+..++.+|++|+++++++++++.+++|
T Consensus 1 dl~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~~---~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 77 (243)
T d1q7ba_ 1 NFEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLG---ANGKGLMLNVTDPASIESVLEKIRAEFG 77 (243)
T ss_dssp CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHG---GGEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhC---CCCcEEEEEecCHHHhhhhhhhhhcccC
Confidence 5899999999999999999999999999999999999999999988884 4678899999999999999999999999
Q ss_pred CccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchh
Q 025672 89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH 168 (249)
Q Consensus 89 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~ 168 (249)
+||++|||||.....++.+.+.++|++.+++|+.++++++|+++|.|.+++. |+||++||..+..+.++.++
T Consensus 78 ~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~--------G~II~isS~~~~~~~~~~~~ 149 (243)
T d1q7ba_ 78 EVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRH--------GRIITIGSVVGTMGNGGQAN 149 (243)
T ss_dssp SCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--------EEEEEECCHHHHHCCTTCHH
T ss_pred CcceehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCC--------CEeeeecchhhcCCCCCCHH
Confidence 9999999999998899999999999999999999999999999999988764 99999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhccCCC
Q 025672 169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAG 248 (249)
Q Consensus 169 y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~a 248 (249)
|++||+|+.+|+|+++.||+ ++|||||+|+||+++|++... .. ++..+.+.+..|++|+++|||||+++.||+||++
T Consensus 150 Y~asKaal~~lt~~lA~ela-~~gIrVN~I~PG~i~T~~~~~-~~-~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~s 226 (243)
T d1q7ba_ 150 YAAAKAGLIGFSKSLAREVA-SRGITVNVVAPGFIETDMTRA-LS-DDQRAGILAQVPAGRLGGAQEIANAVAFLASDEA 226 (243)
T ss_dssp HHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCCHHHHT-SC-HHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHHHHHHHHHHHHHHHHhC-ccCeEEEEEecceEechhhhh-hh-hhHHHHHHhcCCCCCCCCHHHHHHHHHHHhCchh
Confidence 99999999999999999999 999999999999999875443 33 3445667788999999999999999999999986
Q ss_pred C
Q 025672 249 Q 249 (249)
Q Consensus 249 ~ 249 (249)
+
T Consensus 227 ~ 227 (243)
T d1q7ba_ 227 A 227 (243)
T ss_dssp T
T ss_pred c
Confidence 4
|
| >d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Streptomyces coelicolor [TaxId: 1902]
Probab=100.00 E-value=1.3e-55 Score=358.21 Aligned_cols=229 Identities=28% Similarity=0.403 Sum_probs=213.8
Q ss_pred CcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCcc
Q 025672 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD 91 (249)
Q Consensus 12 ~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 91 (249)
||++|||||++|||+++|++|+++|++|++++|++++++++.+++.+.+.++.++++|++|+++++++++++.++||+||
T Consensus 2 gKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iD 81 (257)
T d2rhca1 2 SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVD 81 (257)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSCS
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHhCCCC
Confidence 79999999999999999999999999999999999999999999998888999999999999999999999999999999
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHH--HHhcCCCCCCCCCCceEEEeccccccccCccchhh
Q 025672 92 ILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKY--LKKGGRGQASSSSGGIIINISATLHYTATWYQIHV 169 (249)
Q Consensus 92 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y 169 (249)
++|||||+....++.+.+.++|++.+++|+.++++++|+++|+ |.+++ +|+||+++|..+..+.++...|
T Consensus 82 ilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~--------~g~Ii~i~S~~~~~~~~~~~~Y 153 (257)
T d2rhca1 82 VLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERG--------TGRIVNIASTGGKQGVVHAAPY 153 (257)
T ss_dssp EEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHT--------EEEEEEECCGGGTSCCTTCHHH
T ss_pred EEEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcC--------CcccccccccccccccccchhH
Confidence 9999999988899999999999999999999999999999997 45544 3899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccC---------CCChHHHHHhhhhhhcccCCCCHHHHHHHH
Q 025672 170 SAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVS---------KLAPEEIRSKATDYMAAYKFGEKWDIAMAA 240 (249)
Q Consensus 170 ~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~dva~~v 240 (249)
++||+|+.+|+|+||.||+ ++|||||+|+||+|+|++... ...+++..+.+.+.+|++|+++|||||+++
T Consensus 154 ~asKaal~~ltk~lA~el~-~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~e~~~~~~~~~PlgR~~~pedia~~v 232 (257)
T d2rhca1 154 SASKHGVVGFTKALGLELA-RTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMV 232 (257)
T ss_dssp HHHHHHHHHHHHHHHHHTT-TSEEEEEEEEECSBCSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSTTSSCBCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhh-hhCcEEEEEeeCCCCCHHHHHHHhhhhhhcccChHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence 9999999999999999999 999999999999999876432 244677778888999999999999999999
Q ss_pred HHhccCCCC
Q 025672 241 LYLASDAGQ 249 (249)
Q Consensus 241 ~~l~s~~a~ 249 (249)
.||+||+++
T Consensus 233 ~fL~S~~s~ 241 (257)
T d2rhca1 233 AYLIGPGAA 241 (257)
T ss_dssp HHHTSGGGT
T ss_pred HHHhCchhc
Confidence 999999874
|
| >d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sorbitol dehydrogenase species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=100.00 E-value=2.6e-55 Score=356.10 Aligned_cols=231 Identities=29% Similarity=0.381 Sum_probs=211.5
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
|.|+||++|||||++|||+++|+.|+++|++|++++|+.++++++.+++ +.++.+++||++|+++++++++++.+++
T Consensus 1 M~L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~---~~~~~~~~~Dvt~~~~v~~~~~~~~~~~ 77 (256)
T d1k2wa_ 1 MRLDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEI---GPAACAIALDVTDQASIDRCVAELLDRW 77 (256)
T ss_dssp CTTTTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---CCceEEEEeeCCCHHHHHHHHHHHHHHh
Confidence 4589999999999999999999999999999999999999888888877 5678999999999999999999999999
Q ss_pred CCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch
Q 025672 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 167 (249)
Q Consensus 88 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~ 167 (249)
|+||++|||||+....++.+.+.++|++.+++|+.++++++|+++|.|.+++. +|+||++||..+..+.++.+
T Consensus 78 g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~-------~g~Iv~isS~~~~~~~~~~~ 150 (256)
T d1k2wa_ 78 GSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGR-------GGKIINMASQAGRRGEALVG 150 (256)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTS-------CEEEEEECCGGGTSCCTTCH
T ss_pred CCccEEEeecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHhcc-------CCccccccchhhcccccccc
Confidence 99999999999988889999999999999999999999999999998766542 49999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccC---------CCChHHHHHhhhhhhcccCCCCHHHHHH
Q 025672 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVS---------KLAPEEIRSKATDYMAAYKFGEKWDIAM 238 (249)
Q Consensus 168 ~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~dva~ 238 (249)
.|++||+|+.+|+|+++.||+ ++|||||+|+||+++|++... ....++..+.+...+|++|+++|+|||+
T Consensus 151 ~Y~asKaal~~lt~~lA~el~-~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~~~p~evA~ 229 (256)
T d1k2wa_ 151 VYCATKAAVISLTQSAGLNLI-RHGINVNAIAPGVVDGEHWDGVDAKFADYENLPRGEKKRQVGAAVPFGRMGRAEDLTG 229 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECCBCCTTHHHHHHHHHHHHTCCTTHHHHHHHHHSTTSSCBCHHHHHH
T ss_pred chhhhhhHHHHHHHHHHHHhc-ccCeEEEEEecCCCCchhhhhhhhhhhhhccCChHHHHHHHHhcCCCCCCcCHHHHHH
Confidence 999999999999999999999 999999999999999876432 2234456677788899999999999999
Q ss_pred HHHHhccCCCC
Q 025672 239 AALYLASDAGQ 249 (249)
Q Consensus 239 ~v~~l~s~~a~ 249 (249)
+++||+||+++
T Consensus 230 ~v~fL~S~~a~ 240 (256)
T d1k2wa_ 230 MAIFLATPEAD 240 (256)
T ss_dssp HHHHTTSGGGT
T ss_pred HHHHHhCchhC
Confidence 99999999874
|
| >d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (s)-1-phenylethanol dehydrogenase species: Azoarcus sp. ebn1 [TaxId: 76114]
Probab=100.00 E-value=2.6e-55 Score=354.15 Aligned_cols=230 Identities=30% Similarity=0.390 Sum_probs=198.0
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhC
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 88 (249)
.|+||++|||||++|||+++|+.|+++|++|++++|++.+ ...+.++..+.++.+++||++|+++++++++++.++||
T Consensus 2 rL~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~--~~~~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~G 79 (247)
T d2ew8a1 2 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAP--EAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFG 79 (247)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCH--HHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchH--HHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHHcC
Confidence 4789999999999999999999999999999999998763 34455666788999999999999999999999999999
Q ss_pred CccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchh
Q 025672 89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH 168 (249)
Q Consensus 89 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~ 168 (249)
+||++|||||+....++.+.+.++|++.+++|+.++++++|+++|.|.+++. |+||++||..+..+.++...
T Consensus 80 ~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~--------G~Iv~isS~~~~~~~~~~~~ 151 (247)
T d2ew8a1 80 RCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGW--------GRIINLTSTTYWLKIEAYTH 151 (247)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--------EEEEEECCGGGGSCCSSCHH
T ss_pred CCCEEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCC--------CCccccccchhcccCccccc
Confidence 9999999999998899999999999999999999999999999999998764 99999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhccCCC
Q 025672 169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAG 248 (249)
Q Consensus 169 y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~a 248 (249)
|++||+|+.+|+|+|+.|++ ++|||||+|+||+|+|++......++..........|++|+++|||||++++||+||++
T Consensus 152 Y~asKaal~~ltk~lA~ela-~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~l~r~~~pedvA~~v~fL~S~~s 230 (247)
T d2ew8a1 152 YISTKAANIGFTRALASDLG-KDGITVNAIAPSLVRTATTEASALSAMFDVLPNMLQAIPRLQVPLDLTGAAAFLASDDA 230 (247)
T ss_dssp HHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECCC------------------CTTSSSCSCCCTHHHHHHHHHHTSGGG
T ss_pred chhhhccHHHHHHHHHHHhc-ccCeEEEEEeeCCCCCccccccccchhHHHHHHHhccCCCCCCHHHHHHHHHHHhCchh
Confidence 99999999999999999999 99999999999999988765444333333333444688999999999999999999986
Q ss_pred C
Q 025672 249 Q 249 (249)
Q Consensus 249 ~ 249 (249)
+
T Consensus 231 ~ 231 (247)
T d2ew8a1 231 S 231 (247)
T ss_dssp T
T ss_pred c
Confidence 4
|
| >d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=100.00 E-value=2.1e-55 Score=356.90 Aligned_cols=234 Identities=26% Similarity=0.360 Sum_probs=185.2
Q ss_pred CCCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHH
Q 025672 6 KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN 85 (249)
Q Consensus 6 ~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 85 (249)
..++|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++...+.++.++.||++++++++++++++.+
T Consensus 2 ~~F~LkgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 81 (259)
T d1xq1a_ 2 QRWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSS 81 (259)
T ss_dssp CTTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHH
Confidence 35689999999999999999999999999999999999999999999999988888999999999999999999999999
Q ss_pred Hh-CCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCc
Q 025672 86 HF-GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW 164 (249)
Q Consensus 86 ~~-~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~ 164 (249)
+| |++|++|||||.....++.+.+.++|++.+++|+.++++++|+++|.|++++. |+||++||..+..+.+
T Consensus 82 ~~~g~idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~--------G~Iv~isS~~~~~~~~ 153 (259)
T d1xq1a_ 82 MFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGC--------GNIIFMSSIAGVVSAS 153 (259)
T ss_dssp HHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSS--------CEEEEEC---------
T ss_pred HhCCCcccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhccccccc--------cccccccccccccccc
Confidence 98 78999999999988899999999999999999999999999999999988764 9999999999999999
Q ss_pred cchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhc
Q 025672 165 YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLA 244 (249)
Q Consensus 165 ~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~ 244 (249)
+...|+++|+|+.+|+|++|.|++ ++|||||+|+||+|+|++.. ...+++..+.+....|++|+++|||||++++||+
T Consensus 154 ~~~~Y~asKaal~~lt~~lA~e~~-~~gIrVN~V~PG~i~T~~~~-~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~ 231 (259)
T d1xq1a_ 154 VGSIYSATKGALNQLARNLACEWA-SDGIRANAVAPAVIATPLAE-AVYDDEFKKVVISRKPLGRFGEPEEVSSLVAFLC 231 (259)
T ss_dssp -CCHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEECCSCC--------------------------CCGGGGHHHHHHHT
T ss_pred ccccccccccchhhhhHHHHHHhc-ccCeEEEEeccCcccCHHhh-hhchHHHHHHHHhCCCCCCCcCHHHHHHHHHHHh
Confidence 999999999999999999999999 99999999999999987654 3344566677888899999999999999999999
Q ss_pred cCCCC
Q 025672 245 SDAGQ 249 (249)
Q Consensus 245 s~~a~ 249 (249)
||+++
T Consensus 232 S~~s~ 236 (259)
T d1xq1a_ 232 MPAAS 236 (259)
T ss_dssp SGGGT
T ss_pred Cchhc
Confidence 99864
|
| >d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: D(-)-3-hydroxybutyrate dehydrogenase species: Pseudomonas fragi [TaxId: 296]
Probab=100.00 E-value=3.4e-55 Score=356.39 Aligned_cols=232 Identities=29% Similarity=0.391 Sum_probs=205.1
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCc-chHHHHHHHHHh-cCCCeeEEEccCCCHHHHHHHHHHHHHH
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK-TVLRSAVAALHS-LGIPAIGLEGDVRKREDAVRVVESTINH 86 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~-~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 86 (249)
+|+||++|||||++|||+++|++|+++|++|++++|++ +.++++.+++.. .+.++.++++|++|+++++++++++.++
T Consensus 1 ~L~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~ 80 (260)
T d1x1ta1 1 MLKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQ 80 (260)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHH
T ss_pred CCCcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 47899999999999999999999999999999999974 567888887754 4778999999999999999999999999
Q ss_pred hCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccc
Q 025672 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ 166 (249)
Q Consensus 87 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~ 166 (249)
||+||++|||||.....++.+.+.++|++.+++|+.++++++|+++|+|.+++. |+||++||..+..+.++.
T Consensus 81 ~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~--------G~Iv~isS~~~~~~~~~~ 152 (260)
T d1x1ta1 81 MGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGF--------GRIINIASAHGLVASANK 152 (260)
T ss_dssp HSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--------EEEEEECCGGGTSCCTTC
T ss_pred hCCCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCC--------ceEeecccccceeccCCc
Confidence 999999999999988899999999999999999999999999999999998764 999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCC----------hHHHHHhhhhhhcccCCCCHHHH
Q 025672 167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA----------PEEIRSKATDYMAAYKFGEKWDI 236 (249)
Q Consensus 167 ~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~dv 236 (249)
..|++||+|+.+|+|+++.|++ ++|||||+|+||+|+|++...... ++...+.+.+.+|++|+++|+||
T Consensus 153 ~~Y~asKaal~~lt~~lA~el~-~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~pedi 231 (260)
T d1x1ta1 153 SAYVAAKHGVVGFTKVTALETA-GQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQL 231 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHT-TTTEEEEEEEECCBCC------------------------CHHHHCTTCCCBCHHHH
T ss_pred chhhhhhhhHHHhHHHHHHHhc-hhCcEEEEEecCCCCChhhhhhhhhhhhhcCCChHHHHHHHHHhcCCCCCCcCHHHH
Confidence 9999999999999999999999 999999999999999886543221 12233456788999999999999
Q ss_pred HHHHHHhccCCCC
Q 025672 237 AMAALYLASDAGQ 249 (249)
Q Consensus 237 a~~v~~l~s~~a~ 249 (249)
|++++|||||+++
T Consensus 232 A~~v~fL~S~~a~ 244 (260)
T d1x1ta1 232 GGTAVFLASDAAA 244 (260)
T ss_dssp HHHHHHHHSGGGT
T ss_pred HHHHHHHhChhhC
Confidence 9999999999864
|
| >d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Levodione reductase species: Corynebacterium aquaticum [TaxId: 144185]
Probab=100.00 E-value=5.7e-55 Score=354.19 Aligned_cols=232 Identities=27% Similarity=0.415 Sum_probs=212.3
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhc--CCCeeEEEccCCCHHHHHHHHHHHHHH
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVESTINH 86 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 86 (249)
.|+||++|||||++|||+++|++|+++|++|++++|+.++++++.+++... +.++.+++||++|+++++++++++.++
T Consensus 1 rl~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~ 80 (258)
T d1iy8a_ 1 RFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTER 80 (258)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHH
Confidence 378999999999999999999999999999999999999999988888643 457899999999999999999999999
Q ss_pred hCCccEEEEcCCCCC-CCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCcc
Q 025672 87 FGKLDILVNAAAGNF-LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY 165 (249)
Q Consensus 87 ~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~ 165 (249)
||+||++|||||+.. ..++.+.+.++|++.+++|+.++++++|+++|.|.++.. |+||++||..+..+.++
T Consensus 81 ~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~--------G~Ii~isS~~~~~~~~~ 152 (258)
T d1iy8a_ 81 FGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGS--------GMVVNTASVGGIRGIGN 152 (258)
T ss_dssp HSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--------CEEEEECCGGGTSBCSS
T ss_pred hCCCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcC--------CCCcccccHhhccCCCC
Confidence 999999999999864 568889999999999999999999999999999988764 99999999999999999
Q ss_pred chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCC------CChHHHHHhhhhhhcccCCCCHHHHHHH
Q 025672 166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK------LAPEEIRSKATDYMAAYKFGEKWDIAMA 239 (249)
Q Consensus 166 ~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~dva~~ 239 (249)
...|+++|+|+.+|+|+|+.|++ ++|||||+|+||+|+|++.... ..+++..+.+.+.+|++|+++|+|+|++
T Consensus 153 ~~~Y~asKaal~~lt~~lA~el~-~~gIrVN~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~p~dvA~~ 231 (258)
T d1iy8a_ 153 QSGYAAAKHGVVGLTRNSAVEYG-RYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAPEIAAV 231 (258)
T ss_dssp BHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCTTCSCBCHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHhC-ccCceEEEEeeCcccCHHHHHHHhhcCcccHHHHHHHHHhcCCCCCCcCHHHHHHH
Confidence 99999999999999999999999 9999999999999998764322 2345667778888999999999999999
Q ss_pred HHHhccCCCC
Q 025672 240 ALYLASDAGQ 249 (249)
Q Consensus 240 v~~l~s~~a~ 249 (249)
++||+||+++
T Consensus 232 v~fL~S~~s~ 241 (258)
T d1iy8a_ 232 VAFLLSDDAS 241 (258)
T ss_dssp HHHHTSGGGT
T ss_pred HHHHhCchhc
Confidence 9999999864
|
| >d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: meso-2,3-butanediol dehydrogenase species: Klebsiella pneumoniae [TaxId: 573]
Probab=100.00 E-value=6.1e-55 Score=353.83 Aligned_cols=230 Identities=28% Similarity=0.358 Sum_probs=211.7
Q ss_pred CcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCcc
Q 025672 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD 91 (249)
Q Consensus 12 ~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 91 (249)
.|++|||||++|||+++|++|+++|++|++++|++++++++.+++.+.+.++.+++||++|+++++++++++.++||+||
T Consensus 1 KKValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD 80 (255)
T d1gega_ 1 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFD 80 (255)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCC
T ss_pred CCEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCcc
Confidence 48899999999999999999999999999999999999999999998888999999999999999999999999999999
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhhHH
Q 025672 92 ILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSA 171 (249)
Q Consensus 92 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~~ 171 (249)
++|||||+....++.+.+.++|++.+++|+.++++++|+++|.|.+++. +++|+++||..+..+.++.+.|++
T Consensus 81 ilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~-------~g~Iv~isS~~~~~~~~~~~~Y~a 153 (255)
T d1gega_ 81 VIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGH-------GGKIINACSQAGHVGNPELAVYSS 153 (255)
T ss_dssp EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTS-------CEEEEEECCGGGTSCCTTBHHHHH
T ss_pred EEEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhcc-------ccccccccchhhcccCcccccchh
Confidence 9999999988899999999999999999999999999999998876643 488999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCC---------CChHHHHHhhhhhhcccCCCCHHHHHHHHHH
Q 025672 172 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK---------LAPEEIRSKATDYMAAYKFGEKWDIAMAALY 242 (249)
Q Consensus 172 sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~ 242 (249)
+|+|+.+|+|+|+.||+ ++|||||+|+||+|+|++.... ...++..+.+.+.+|++|+++|||||++++|
T Consensus 154 sKaal~~ltk~lA~el~-~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~peevA~~v~f 232 (255)
T d1gega_ 154 SKFAVRGLTQTAARDLA-PLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVSY 232 (255)
T ss_dssp HHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTCTTCSCBCHHHHHHHHHH
T ss_pred CHHHHHhhHHHHHHHhh-hhCcEEEEEecCcccChHHhhhhhhhHhhhcccchhHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence 99999999999999999 9999999999999998754321 1223445667788999999999999999999
Q ss_pred hccCCCC
Q 025672 243 LASDAGQ 249 (249)
Q Consensus 243 l~s~~a~ 249 (249)
|+||+++
T Consensus 233 L~S~~a~ 239 (255)
T d1gega_ 233 LASPDSD 239 (255)
T ss_dssp HHSGGGT
T ss_pred HhCchhC
Confidence 9999874
|
| >d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: R-specific alcohol dehydrogenase species: Lactobacillus brevis [TaxId: 1580]
Probab=100.00 E-value=1.5e-54 Score=350.51 Aligned_cols=231 Identities=28% Similarity=0.371 Sum_probs=211.7
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhC
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 88 (249)
.|+||++|||||++|||+++|++|+++|++|++++|+.+.++++.+++.. +.++.+++||++|+++++++++++.++||
T Consensus 3 rL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G 81 (251)
T d1zk4a1 3 RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGT-PDQIQFFQHDSSDEDGWTKLFDATEKAFG 81 (251)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC-TTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCC-CCcEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 58999999999999999999999999999999999999999999998854 55899999999999999999999999999
Q ss_pred CccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchh
Q 025672 89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH 168 (249)
Q Consensus 89 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~ 168 (249)
+||++|||||.....++.+.+.++|++.+++|+.++++++++++|.|.+++. +|+||++||..+..+.++...
T Consensus 82 ~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~-------gg~Ii~isS~~~~~~~~~~~~ 154 (251)
T d1zk4a1 82 PVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGL-------GASIINMSSIEGFVGDPSLGA 154 (251)
T ss_dssp SCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSS-------CEEEEEECCGGGTSCCTTCHH
T ss_pred CceEEEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCC-------CCceEeeeccceeccCCCchh
Confidence 9999999999998899999999999999999999999999999999988764 468999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHH--hcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhccC
Q 025672 169 VSAAKAAVDSITRSLALE--WGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246 (249)
Q Consensus 169 y~~sK~a~~~l~~~la~e--~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~ 246 (249)
|+++|+|+.+|+|++|.| ++ ++|||||+|+||+|+|++......+ +........+|++|+++|||||++++||+||
T Consensus 155 Y~asKaal~~lt~~lA~e~~l~-~~gIrVN~I~PG~i~T~~~~~~~~~-~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~ 232 (251)
T d1zk4a1 155 YNASKGAVRIMSKSAALDCALK-DYDVRVNTVHPGYIKTPLVDDLPGA-EEAMSQRTKTPMGHIGEPNDIAYICVYLASN 232 (251)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHT-TCSEEEEEEEECCBCCHHHHTSTTH-HHHHTSTTTCTTSSCBCHHHHHHHHHHHHSG
T ss_pred HHHHHHHHhcchHHHHHHHhcC-CCcEEEEEEeCCCCCChhHHhcCCH-HHHHHHHhCCCCCCCcCHHHHHHHHHHHhCc
Confidence 999999999999999998 55 8899999999999998765554433 4445566778999999999999999999999
Q ss_pred CCC
Q 025672 247 AGQ 249 (249)
Q Consensus 247 ~a~ 249 (249)
+++
T Consensus 233 ~s~ 235 (251)
T d1zk4a1 233 ESK 235 (251)
T ss_dssp GGT
T ss_pred hhC
Confidence 864
|
| >d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative oxidoreductase Rv2002 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=100.00 E-value=2.4e-54 Score=347.29 Aligned_cols=222 Identities=29% Similarity=0.351 Sum_probs=205.2
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhC
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 88 (249)
.|+||++|||||++|||+++|+.|+++|++|++++|++++++++.+++. .++.+++||++|+++++++++++.++++
T Consensus 3 ~L~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 79 (244)
T d1nffa_ 3 RLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELA---DAARYVHLDVTQPAQWKAAVDTAVTAFG 79 (244)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTG---GGEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhh---CcceEEEeecCCHHHHHHHHHHHHHHhC
Confidence 5899999999999999999999999999999999999999988888874 4688999999999999999999999999
Q ss_pred CccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchh
Q 025672 89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH 168 (249)
Q Consensus 89 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~ 168 (249)
++|++|||||.....++.+.+.++|++.+++|+.++++++|+++|.|.+++. |+||++||..+..+.++...
T Consensus 80 ~idilinnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~--------G~Ii~isS~~~~~~~~~~~~ 151 (244)
T d1nffa_ 80 GLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGR--------GSIINISSIEGLAGTVACHG 151 (244)
T ss_dssp CCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--------EEEEEECCGGGTSCCTTBHH
T ss_pred CCeEEEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCc--------ceEEeccccccccccccccc
Confidence 9999999999988899999999999999999999999999999999998764 99999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhccCCC
Q 025672 169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAG 248 (249)
Q Consensus 169 y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~a 248 (249)
|+++|+|+.+|+|++++||+ ++|||||+|+||+|+|++... .. ......|++|+++|||+|++++||+||++
T Consensus 152 Y~asKaal~~ltk~lA~el~-~~gIrVN~I~PG~i~T~~~~~-~~------~~~~~~pl~R~~~p~diA~~v~fL~s~~s 223 (244)
T d1nffa_ 152 YTATKFAVRGLTKSTALELG-PSGIRVNSIHPGLVKTPMTDW-VP------EDIFQTALGRAAEPVEVSNLVVYLASDES 223 (244)
T ss_dssp HHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECCBCSGGGTT-SC------TTCSCCSSSSCBCHHHHHHHHHHHHSGGG
T ss_pred hhhHHHHHHHHHHHHHHHhc-ccCEEEEEEeeCCccChhHhh-hh------HHHHhccccCCCCHHHHHHHHHHHhChhh
Confidence 99999999999999999999 999999999999999876432 21 12345799999999999999999999986
Q ss_pred C
Q 025672 249 Q 249 (249)
Q Consensus 249 ~ 249 (249)
+
T Consensus 224 ~ 224 (244)
T d1nffa_ 224 S 224 (244)
T ss_dssp T
T ss_pred C
Confidence 4
|
| >d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=2.9e-54 Score=346.88 Aligned_cols=225 Identities=29% Similarity=0.376 Sum_probs=204.2
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
|.|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++ +..++.||++|+++++++++++.+++
T Consensus 1 M~L~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~~-----~~~~~~~Dv~~~~~v~~~~~~~~~~~ 75 (242)
T d1ulsa_ 1 MRLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV-----GAHPVVMDVADPASVERGFAEALAHL 75 (242)
T ss_dssp CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT-----TCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc-----CCeEEEEecCCHHHHHHHHHHHHHhc
Confidence 4589999999999999999999999999999999999998888877655 46789999999999999999999999
Q ss_pred CCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch
Q 025672 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 167 (249)
Q Consensus 88 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~ 167 (249)
|+||++|||||+....++.+.+.++|++.+++|+.++++++|+++|.|.+++. +.|+++|| .+..+.++..
T Consensus 76 g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~--------~~i~~~ss-~~~~~~~~~~ 146 (242)
T d1ulsa_ 76 GRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNP--------GSIVLTAS-RVYLGNLGQA 146 (242)
T ss_dssp SSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCC--------EEEEEECC-GGGGCCTTCH
T ss_pred CCceEEEECCcccccCchhhCcchhhhccccccchhhhhhhhhcccccccccc--------ceeeeecc-ccccCCCCCc
Confidence 99999999999988899999999999999999999999999999999987753 66777766 4677888899
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhccCC
Q 025672 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247 (249)
Q Consensus 168 ~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~ 247 (249)
+|+++|+|+.+|+|+|++||+ ++|||||+|+||+|+|++... . +++..+.+...+|++|+++|||+|+++.||+||+
T Consensus 147 ~Y~asKaal~~ltk~lA~ela-~~gIrVN~I~PG~v~T~~~~~-~-~~~~~~~~~~~~pl~R~~~pedia~~v~fL~S~~ 223 (242)
T d1ulsa_ 147 NYAASMAGVVGLTRTLALELG-RWGIRVNTLAPGFIETRMTAK-V-PEKVREKAIAATPLGRAGKPLEVAYAALFLLSDE 223 (242)
T ss_dssp HHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCCTTTSS-S-CHHHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGG
T ss_pred chHHHHHHHHHHHHHHHHHHh-hhCcEEEEEeeCcccChhhhc-C-CHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhchh
Confidence 999999999999999999999 999999999999999876533 2 4566778888999999999999999999999998
Q ss_pred CC
Q 025672 248 GQ 249 (249)
Q Consensus 248 a~ 249 (249)
++
T Consensus 224 s~ 225 (242)
T d1ulsa_ 224 SS 225 (242)
T ss_dssp GT
T ss_pred hC
Confidence 64
|
| >d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein TTHA0369 species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=2.6e-54 Score=348.26 Aligned_cols=226 Identities=30% Similarity=0.411 Sum_probs=202.6
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhC
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 88 (249)
.|+||++|||||++|||+++|+.|+++|++|++++|+++.. +..+++ ...+++||++|+++++++++++.++||
T Consensus 2 ~l~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~-~~~~~~-----~~~~~~~Dv~~~~~v~~~~~~~~~~~G 75 (248)
T d2d1ya1 2 LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGK-EVAEAI-----GGAFFQVDLEDERERVRFVEEAAYALG 75 (248)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHH-HHHHHH-----TCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHH-HHHHHc-----CCeEEEEeCCCHHHHHHHHHHHHHhcC
Confidence 47999999999999999999999999999999999997753 344444 246789999999999999999999999
Q ss_pred CccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchh
Q 025672 89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH 168 (249)
Q Consensus 89 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~ 168 (249)
+||++|||||.....++.+.+.++|++.+++|+.++++++|+++|.|++++. |+||+++|..+..+.++...
T Consensus 76 ~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~--------G~Ii~isS~~~~~~~~~~~~ 147 (248)
T d2d1ya1 76 RVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGG--------GAIVNVASVQGLFAEQENAA 147 (248)
T ss_dssp CCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTC--------EEEEEECCGGGTSBCTTBHH
T ss_pred CCCeEEEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhccccccccc--------ccccccccccccccccccch
Confidence 9999999999988899999999999999999999999999999999988764 99999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCC----CChHHHHHhhhhhhcccCCCCHHHHHHHHHHhc
Q 025672 169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK----LAPEEIRSKATDYMAAYKFGEKWDIAMAALYLA 244 (249)
Q Consensus 169 y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~ 244 (249)
|+++|+|+.+|+|++++||+ ++|||||+|+||+|+|++.... ..+++..+.+.+..|++|+++|||+|++++||+
T Consensus 148 Y~asKaal~~ltk~lA~el~-~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~pedia~~v~fL~ 226 (248)
T d2d1ya1 148 YNASKGGLVNLTRSLALDLA-PLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFLA 226 (248)
T ss_dssp HHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCCHHHHHHHC--------CHHHHTTSTTSSCBCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHhh-hhCcEEEEEeeCCCCCchHHHHhhcCCCHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh
Confidence 99999999999999999999 9999999999999998865432 234566677888899999999999999999999
Q ss_pred cCCCC
Q 025672 245 SDAGQ 249 (249)
Q Consensus 245 s~~a~ 249 (249)
||+++
T Consensus 227 S~~s~ 231 (248)
T d2d1ya1 227 SEKAS 231 (248)
T ss_dssp SGGGT
T ss_pred Cchhc
Confidence 99864
|
| >d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=100.00 E-value=2.5e-54 Score=347.67 Aligned_cols=226 Identities=27% Similarity=0.374 Sum_probs=209.1
Q ss_pred cEEEEecCCCchhHHHHHHHHHcCCeEEEEe-CCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCcc
Q 025672 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMG-RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD 91 (249)
Q Consensus 13 k~~lItGa~~giG~~~a~~l~~~G~~v~l~~-r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 91 (249)
+++|||||++|||+++|++|+++|++|++.+ |+++.++++.++++..+.++.++++|++|+++++++++++.+++|++|
T Consensus 2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD 81 (244)
T d1edoa_ 2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTID 81 (244)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCS
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence 5899999999999999999999999999875 567778999999988888999999999999999999999999999999
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhhHH
Q 025672 92 ILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSA 171 (249)
Q Consensus 92 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~~ 171 (249)
++|||||.....++.+.+.++|++.+++|+.++++++|+++|.|.+++. |+||++||..+..+.++...|++
T Consensus 82 iLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~--------G~IVnisS~~~~~~~~~~~~Y~a 153 (244)
T d1edoa_ 82 VVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRK--------GRIINIASVVGLIGNIGQANYAA 153 (244)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--------EEEEEECCTHHHHCCTTCHHHHH
T ss_pred ccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCC--------cEEEEEcChhhcCCCCCCHHHHH
Confidence 9999999998899999999999999999999999999999999988764 99999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhc-cCCCC
Q 025672 172 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLA-SDAGQ 249 (249)
Q Consensus 172 sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~-s~~a~ 249 (249)
||+|+.+|+|+|+.||+ ++|||||+|+||+++|++... . .++..+.+.+..|++|+++|||+|+++.||+ ||+++
T Consensus 154 sKaal~~ltk~lA~el~-~~gIrvN~I~PG~i~T~~~~~-~-~~~~~~~~~~~~pl~R~~~p~dvA~~v~fLa~S~~a~ 229 (244)
T d1edoa_ 154 AKAGVIGFSKTAAREGA-SRNINVNVVCPGFIASDMTAK-L-GEDMEKKILGTIPLGRTGQPENVAGLVEFLALSPAAS 229 (244)
T ss_dssp HHHHHHHHHHHHHHHHH-TTTEEEEEEEECSBCSHHHHT-T-CHHHHHHHHTSCTTCSCBCHHHHHHHHHHHHHCSGGG
T ss_pred HHHHHHHChHHHHHHHh-hhCcEEEEEecceeccHHHHH-h-hHHHHHHHHhcCCCCCCcCHHHHHHHHHHHHCCchhc
Confidence 99999999999999999 999999999999999875433 3 3556677888899999999999999999996 88763
|
| >d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase species: Streptomyces hydrogenans [TaxId: 1905]
Probab=100.00 E-value=1.4e-54 Score=350.72 Aligned_cols=228 Identities=29% Similarity=0.303 Sum_probs=207.6
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
.+|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++ +.++.+++||++|+++++++++++.++|
T Consensus 1 ndL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 77 (254)
T d1hdca_ 1 NDLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL---GDAARYQHLDVTIEEDWQRVVAYAREEF 77 (254)
T ss_dssp CCCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT---GGGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---CCceEEEEcccCCHHHHHHHHHHHHHHc
Confidence 3689999999999999999999999999999999999998888777666 4578999999999999999999999999
Q ss_pred CCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch
Q 025672 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 167 (249)
Q Consensus 88 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~ 167 (249)
|++|++|||||.....++.+.+.++|++.+++|+.++++++|+++|.|++++. |+||++||..+..+.++..
T Consensus 78 g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~--------G~II~isS~~~~~~~~~~~ 149 (254)
T d1hdca_ 78 GSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGG--------GSIVNISSAAGLMGLALTS 149 (254)
T ss_dssp SCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--------EEEEEECCGGGTSCCTTCH
T ss_pred CCccEEEecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCC--------Ceecccccchhcccccchh
Confidence 99999999999988899999999999999999999999999999999988764 9999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCC-CHHHHHHHHHHhccC
Q 025672 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFG-EKWDIAMAALYLASD 246 (249)
Q Consensus 168 ~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~dva~~v~~l~s~ 246 (249)
.|++||+|+.+|+|+|+.||+ ++|||||+|+||+|+|++...... +..+......|++|++ +|||||++++||+||
T Consensus 150 ~Y~asKaal~~lt~~lA~e~a-~~gIrVN~I~PG~v~T~~~~~~~~--~~~~~~~~~~pl~R~g~~PedvA~~v~fL~S~ 226 (254)
T d1hdca_ 150 SYGASKWGVRGLSKLAAVELG-TDRIRVNSVHPGMTYTPMTAETGI--RQGEGNYPNTPMGRVGNEPGEIAGAVVKLLSD 226 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCCHHHHHHTC--CCSTTSCTTSTTSSCB-CHHHHHHHHHHHHSG
T ss_pred hHHHHHHHHHHHHHHHHHHhC-CCceEEEEeeeCcccCccchhcCH--HHHHHHHhCCCCCCCCCCHHHHHHHHHHHhch
Confidence 999999999999999999999 999999999999999876533221 1234456678999998 699999999999999
Q ss_pred CCC
Q 025672 247 AGQ 249 (249)
Q Consensus 247 ~a~ 249 (249)
+++
T Consensus 227 ~a~ 229 (254)
T d1hdca_ 227 TSS 229 (254)
T ss_dssp GGT
T ss_pred hhC
Confidence 864
|
| >d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=100.00 E-value=3.3e-54 Score=345.37 Aligned_cols=221 Identities=25% Similarity=0.338 Sum_probs=195.2
Q ss_pred CCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHH
Q 025672 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (249)
Q Consensus 7 ~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 86 (249)
.++|+||++|||||++|||+++|++|+++|++|++++|+.+.+ .++..+++|++|+++++++++++.+.
T Consensus 2 ~psl~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~-----------~~~~~~~~Dv~~~~~v~~~~~~~~~~ 70 (237)
T d1uzma1 2 KPPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAP-----------KGLFGVEVDVTDSDAVDRAFTAVEEH 70 (237)
T ss_dssp CCCCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCC-----------TTSEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcchh-----------cCceEEEEecCCHHHHHHHHHHHHHh
Confidence 4678999999999999999999999999999999999987643 35778999999999999999999999
Q ss_pred hCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccc
Q 025672 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ 166 (249)
Q Consensus 87 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~ 166 (249)
+|++|++|||||.....++.+.+.++|++++++|+.+++.++|+++|.|.+++. |+||++||..+..+.++.
T Consensus 71 ~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~--------g~Iv~isS~~~~~~~~~~ 142 (237)
T d1uzma1 71 QGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKF--------GRMIFIGSVSGLWGIGNQ 142 (237)
T ss_dssp HSSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTC--------EEEEEECCCCC-----CC
T ss_pred cCCceEEEeeecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccCC--------CceEEEcchhhccCCccc
Confidence 999999999999988899999999999999999999999999999999998864 899999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhccC
Q 025672 167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246 (249)
Q Consensus 167 ~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~ 246 (249)
..|++||+|+.+|+|+|+.|++ ++|||||+|+||+|+|++... . ++...+...+.+|++|+++|||+|++++||+||
T Consensus 143 ~~Y~asKaal~~lt~~lA~e~~-~~gIrVN~I~PG~v~T~~~~~-~-~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~ 219 (237)
T d1uzma1 143 ANYAASKAGVIGMARSIARELS-KANVTANVVAPGYIDTDMTRA-L-DERIQQGALQFIPAKRVGTPAEVAGVVSFLASE 219 (237)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCCHHHHH-S-CHHHHHHHGGGCTTCSCBCHHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHHHHHHHHhhhh-cCCceeeeeeeCcCCChhhhc-c-CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCc
Confidence 9999999999999999999999 999999999999999876433 2 455667788889999999999999999999999
Q ss_pred CCC
Q 025672 247 AGQ 249 (249)
Q Consensus 247 ~a~ 249 (249)
+++
T Consensus 220 ~s~ 222 (237)
T d1uzma1 220 DAS 222 (237)
T ss_dssp GGT
T ss_pred hhc
Confidence 864
|
| >d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), I [TaxId: 4076]
Probab=100.00 E-value=3.2e-53 Score=343.88 Aligned_cols=234 Identities=26% Similarity=0.358 Sum_probs=213.9
Q ss_pred CCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHH
Q 025672 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (249)
Q Consensus 7 ~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 86 (249)
+++|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++...+..++++.||++++++++++++++.+.
T Consensus 1 ~f~L~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~ 80 (258)
T d1ae1a_ 1 RWSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHV 80 (258)
T ss_dssp CCCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CcCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHH
Confidence 36789999999999999999999999999999999999999999999999988889999999999999999999999999
Q ss_pred h-CCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCcc
Q 025672 87 F-GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY 165 (249)
Q Consensus 87 ~-~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~ 165 (249)
+ +.+|++|||||.....++.+.+.++|.+.+++|+.+++++.+++.|.|.++.. |+||++||..+..+.++
T Consensus 81 ~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~--------g~ii~isS~~~~~~~~~ 152 (258)
T d1ae1a_ 81 FDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQN--------GNVIFLSSIAGFSALPS 152 (258)
T ss_dssp TTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTS--------EEEEEECCGGGTSCCTT
T ss_pred hCCCcEEEeccccccccCccccCCHHHHhhhhhhccccccccccccccccccccc--------ccccccccccccccccc
Confidence 8 68999999999998899999999999999999999999999999999988764 99999999999999999
Q ss_pred chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCC----hHHHHHhhhhhhcccCCCCHHHHHHHHH
Q 025672 166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA----PEEIRSKATDYMAAYKFGEKWDIAMAAL 241 (249)
Q Consensus 166 ~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~dva~~v~ 241 (249)
...|+++|+|+.+|+|.+++|++ ++|||||+|+||+++|++...... .++..+.+....|++|+++|+|||++++
T Consensus 153 ~~~Y~~sK~al~~lt~~lA~el~-~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~plgR~~~pediA~~v~ 231 (258)
T d1ae1a_ 153 VSLYSASKGAINQMTKSLACEWA-KDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQEVSALIA 231 (258)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBC-------------CHHHHHHHHHHSTTCSCBCHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHHHHHhcC-cCcEEEEEEeeCcccCcchhhhhhhhhhhHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence 99999999999999999999999 999999999999999886544322 3567778888899999999999999999
Q ss_pred HhccCCCC
Q 025672 242 YLASDAGQ 249 (249)
Q Consensus 242 ~l~s~~a~ 249 (249)
||+||+++
T Consensus 232 fL~S~~s~ 239 (258)
T d1ae1a_ 232 FLCFPAAS 239 (258)
T ss_dssp HHHSGGGT
T ss_pred HHhChhhC
Confidence 99999864
|
| >d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Retinal dehydrogenase/reductase 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.3e-53 Score=344.37 Aligned_cols=225 Identities=32% Similarity=0.442 Sum_probs=204.0
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
..|+||++|||||++|||+++|++|+++|++|++++|+++.++++.+++ .++.++.||++|+++++++++++.++|
T Consensus 2 ~rl~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~----~~~~~~~~Dvs~~~~v~~~~~~~~~~~ 77 (250)
T d1ydea1 2 TRYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQEL----PGAVFILCDVTQEDDVKTLVSETIRRF 77 (250)
T ss_dssp CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC----TTEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc----CCCeEEEccCCCHHHHHHHHHHHHHhc
Confidence 4689999999999999999999999999999999999998888877765 357899999999999999999999999
Q ss_pred CCccEEEEcCCCCC-CCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccc
Q 025672 88 GKLDILVNAAAGNF-LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ 166 (249)
Q Consensus 88 ~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~ 166 (249)
|+||++|||||... ..++.+.+.++|++.+++|+.++++++|+++|+|+++ +|+||++||..+..+.++.
T Consensus 78 g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~---------~G~Ii~isS~~~~~~~~~~ 148 (250)
T d1ydea1 78 GRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS---------QGNVINISSLVGAIGQAQA 148 (250)
T ss_dssp SCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH---------TCEEEEECCHHHHHCCTTC
T ss_pred CCCCEEEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhC---------CCCCcccccccccccccCc
Confidence 99999999999765 4677889999999999999999999999999999865 3899999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccC----CCChHHHHHhhhhhhcccCCCCHHHHHHHHHH
Q 025672 167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVS----KLAPEEIRSKATDYMAAYKFGEKWDIAMAALY 242 (249)
Q Consensus 167 ~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~ 242 (249)
..|+++|+|+.+|+|+||+|++ ++|||||+|+||+|+|++... ...++...+......|++|+++|||+|++++|
T Consensus 149 ~~Y~asKaal~~lt~~lA~e~a-~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~p~eva~~v~f 227 (250)
T d1ydea1 149 VPYVATKGAVTAMTKALALDES-PYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPLGRMGQPAEVGAAAVF 227 (250)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTSTTSSCBCHHHHHHHHHH
T ss_pred chhHHHHhhHHHHHHHHHHHhc-ccCeEEEEEeeCCCCChhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCHHHHHHHHHH
Confidence 9999999999999999999999 999999999999999876432 22244556666777899999999999999999
Q ss_pred hccC
Q 025672 243 LASD 246 (249)
Q Consensus 243 l~s~ 246 (249)
|+||
T Consensus 228 L~Sd 231 (250)
T d1ydea1 228 LASE 231 (250)
T ss_dssp HHHH
T ss_pred HhCc
Confidence 9997
|
| >d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=7.1e-54 Score=344.61 Aligned_cols=226 Identities=25% Similarity=0.314 Sum_probs=206.3
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
|+|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++. .+..+.||++|+++++++++ ++
T Consensus 1 mdl~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~----~~~~~~~Dv~~~~~v~~~~~----~~ 72 (242)
T d1cyda_ 1 LNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECP----GIEPVCVDLGDWDATEKALG----GI 72 (242)
T ss_dssp CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST----TCEEEECCTTCHHHHHHHHT----TC
T ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcC----CCeEEEEeCCCHHHHHHHHH----Hc
Confidence 56899999999999999999999999999999999999988888777663 57889999999999887764 57
Q ss_pred CCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch
Q 025672 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 167 (249)
Q Consensus 88 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~ 167 (249)
|+||++|||||.....++.+.+.++|++.+++|+.++++++|.+.|.|.+++. +|+||+++|..+..+.++..
T Consensus 73 g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~-------~g~ii~isS~~~~~~~~~~~ 145 (242)
T d1cyda_ 73 GPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGV-------PGSIVNVSSMVAHVTFPNLI 145 (242)
T ss_dssp CCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC-------CEEEEEECCGGGTSCCTTBH
T ss_pred CCCeEEEECCccccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcc-------cCcccccchhhccccCCccc
Confidence 99999999999988899999999999999999999999999999998765432 48999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhccCC
Q 025672 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247 (249)
Q Consensus 168 ~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~ 247 (249)
.|+++|+|+.+|+|+|+.||+ ++|||||+|+||+++|++.......++..+.+.+..|++|+++|||+|+++.||+||+
T Consensus 146 ~Y~asKaal~~lt~~lA~e~~-~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~R~~~peeva~~v~fL~S~~ 224 (242)
T d1cyda_ 146 TYSSTKGAMTMLTKAMAMELG-PHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERHPLRKFAEVEDVVNSILFLLSDR 224 (242)
T ss_dssp HHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECCBTTHHHHHHTCCHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGG
T ss_pred cccchHHHHHHHHHHHHHHhC-ccCeecccCCCCCccCHHHHhhcCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCch
Confidence 999999999999999999999 9999999999999998876655666778888889999999999999999999999998
Q ss_pred CC
Q 025672 248 GQ 249 (249)
Q Consensus 248 a~ 249 (249)
++
T Consensus 225 s~ 226 (242)
T d1cyda_ 225 SA 226 (242)
T ss_dssp GT
T ss_pred hc
Confidence 64
|
| >d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3beta/17beta hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=100.00 E-value=1.8e-53 Score=344.40 Aligned_cols=229 Identities=31% Similarity=0.386 Sum_probs=207.4
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
..|+||++|||||++|||+++|++|+++|++|++++|+++.++++.+++ +.+..++++|++|+++++++++++.+++
T Consensus 2 nrL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 78 (253)
T d1hxha_ 2 NRLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL---GERSMFVRHDVSSEADWTLVMAAVQRRL 78 (253)
T ss_dssp CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH---CTTEEEECCCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---CCCeEEEEeecCCHHHHHHHHHHHHHHh
Confidence 4589999999999999999999999999999999999999999888887 4578899999999999999999999999
Q ss_pred CCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch
Q 025672 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 167 (249)
Q Consensus 88 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~ 167 (249)
|++|++|||||.....++.+.+.++|++.+++|+.++++++++++|.|+++ +|+||++||..+..+.++..
T Consensus 79 g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~---------~G~Iv~isS~~~~~~~~~~~ 149 (253)
T d1hxha_ 79 GTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKET---------GGSIINMASVSSWLPIEQYA 149 (253)
T ss_dssp CSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT---------CEEEEEECCGGGTSCCTTBH
T ss_pred CCCCeEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhc---------CCceecccchhhhcCccccc
Confidence 999999999999888899999999999999999999999999999999654 39999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCC--CCeEEEEEecCccccccccCCCC---hHHHHHhhhhhhcccCCCCHHHHHHHHHH
Q 025672 168 HVSAAKAAVDSITRSLALEWGTD--YAIRVNGIAPGPIKDTAGVSKLA---PEEIRSKATDYMAAYKFGEKWDIAMAALY 242 (249)
Q Consensus 168 ~y~~sK~a~~~l~~~la~e~~~~--~gi~v~~v~pG~v~t~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~dva~~v~~ 242 (249)
+|++||+|+.+|+|++++|++ + +|||||+|+||+|+|++...... .++.........|++|+++|||+|++++|
T Consensus 150 ~Y~asKaal~~lt~~lA~e~~-~~g~~IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~gr~~~pedvA~~v~f 228 (253)
T d1hxha_ 150 GYSASKAAVSALTRAAALSCR-KQGYAIRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPERIAQLVLF 228 (253)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH-HHTCCEEEEEEEESEECCHHHHHHSCTTCCHHHHBCBTTTBTTCCEECHHHHHHHHHH
T ss_pred cccchhHHHHHHHHHHHHHHh-hcCCCEEEEEEeECCCcCHhHHhhCcchhhHHHHHhCccccccCCCCCHHHHHHHHHH
Confidence 999999999999999999998 5 56999999999999886543322 34444455566778999999999999999
Q ss_pred hccCCCC
Q 025672 243 LASDAGQ 249 (249)
Q Consensus 243 l~s~~a~ 249 (249)
|+||+++
T Consensus 229 L~S~~s~ 235 (253)
T d1hxha_ 229 LASDESS 235 (253)
T ss_dssp HHSGGGT
T ss_pred HhChhhC
Confidence 9999874
|
| >d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.5e-53 Score=341.11 Aligned_cols=226 Identities=26% Similarity=0.327 Sum_probs=206.2
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
+.|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++. .+..+.+|++|+++++++++ ++
T Consensus 3 ~~L~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~~----~~~~~~~Dv~d~~~v~~~~~----~~ 74 (244)
T d1pr9a_ 3 LFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECP----GIEPVCVDLGDWEATERALG----SV 74 (244)
T ss_dssp CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST----TCEEEECCTTCHHHHHHHHT----TC
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcC----CCeEEEEeCCCHHHHHHHHH----Hh
Confidence 45899999999999999999999999999999999999998888877763 47889999999999887764 57
Q ss_pred CCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch
Q 025672 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 167 (249)
Q Consensus 88 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~ 167 (249)
|+||++|||||.....++.+.+.++|++.+++|+.++++++++++|.|.++.. +|+||++||..+..+.++..
T Consensus 75 g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~-------~g~Ii~isS~~~~~~~~~~~ 147 (244)
T d1pr9a_ 75 GPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGV-------PGAIVNVSSQCSQRAVTNHS 147 (244)
T ss_dssp CCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC-------CEEEEEECCGGGTSCCTTBH
T ss_pred CCceEEEeccccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCC-------cceEeecccccccccccchh
Confidence 99999999999998899999999999999999999999999999997654432 49999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhccCC
Q 025672 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247 (249)
Q Consensus 168 ~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~ 247 (249)
.|++||+|+.+|+|+++.||+ ++|||||+|+||+|+|++........+..+.+.+.+|++|+++|||||+++.||+||+
T Consensus 148 ~Y~asKaal~~lt~~lA~el~-~~gIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~R~~~peevA~~v~fL~S~~ 226 (244)
T d1pr9a_ 148 VYCSTKGALDMLTKVMALELG-PHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNAILFLLSDR 226 (244)
T ss_dssp HHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECCBCSHHHHTTSCSHHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGG
T ss_pred hhhhhHHHHHHHHHHHHHHhC-CCcEEEEEEeeCcCcChHHhhhccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCch
Confidence 999999999999999999999 8999999999999999877666666677778888999999999999999999999998
Q ss_pred CC
Q 025672 248 GQ 249 (249)
Q Consensus 248 a~ 249 (249)
++
T Consensus 227 a~ 228 (244)
T d1pr9a_ 227 SG 228 (244)
T ss_dssp GT
T ss_pred hC
Confidence 74
|
| >d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Mannitol dehydrogenase species: Mushroom (Agaricus bisporus) [TaxId: 5341]
Probab=100.00 E-value=1.2e-52 Score=341.28 Aligned_cols=233 Identities=21% Similarity=0.379 Sum_probs=209.4
Q ss_pred CCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHH-hcCCCeeEEEccCCCHHHHHHHHHHHHH
Q 025672 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALH-SLGIPAIGLEGDVRKREDAVRVVESTIN 85 (249)
Q Consensus 7 ~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 85 (249)
.++++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++. ..+.++.+++||++|+++++++++++.+
T Consensus 4 ~m~l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~ 83 (260)
T d1h5qa_ 4 TISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDA 83 (260)
T ss_dssp EECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred cccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHH
Confidence 357999999999999999999999999999999999999999998888875 4577899999999999999999999999
Q ss_pred HhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc----
Q 025672 86 HFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT---- 161 (249)
Q Consensus 86 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~---- 161 (249)
++|++|++|||||+....++.+.+.++|++.+++|+.++++++++++|.|.++.. ++.|++++|.....
T Consensus 84 ~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~-------~g~i~~~~s~~~~~~~~~ 156 (260)
T d1h5qa_ 84 DLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQ-------KGSIVVTSSMSSQIINQS 156 (260)
T ss_dssp HSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC-------CEEEEEECCGGGTSCCEE
T ss_pred HhCCCcEecccccccccCCHHHhccccccccccccccchhhhhhhhccccccccc-------ceEEEEeecccccccccc
Confidence 9999999999999988899999999999999999999999999999999965543 47888887766543
Q ss_pred ---cCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHH
Q 025672 162 ---ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAM 238 (249)
Q Consensus 162 ---~~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~ 238 (249)
+.++...|+++|+|+.+|+|+++.||+ ++|||||+|+||+|+|++... . +++..+...+.+|++|+++|||||+
T Consensus 157 ~~~~~~~~~~Y~asKaal~~lt~~lA~el~-~~gIrvN~I~PG~i~T~~~~~-~-~~~~~~~~~~~~pl~R~g~pedvA~ 233 (260)
T d1h5qa_ 157 SLNGSLTQVFYNSSKAACSNLVKGLAAEWA-SAGIRVNALSPGYVNTDQTAH-M-DKKIRDHQASNIPLNRFAQPEEMTG 233 (260)
T ss_dssp ETTEECSCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCCGGGGG-S-CHHHHHHHHHTCTTSSCBCGGGGHH
T ss_pred ccccCccccchhhhhhhHHHHHHHHHHHhc-hhCeEEeecCCCcccCcchhc-c-CHHHHHHHHhcCCCCCCcCHHHHHH
Confidence 335678999999999999999999999 999999999999999876533 3 4566777888999999999999999
Q ss_pred HHHHhccCCCC
Q 025672 239 AALYLASDAGQ 249 (249)
Q Consensus 239 ~v~~l~s~~a~ 249 (249)
+++||+||+++
T Consensus 234 ~v~fL~S~~s~ 244 (260)
T d1h5qa_ 234 QAILLLSDHAT 244 (260)
T ss_dssp HHHHHHSGGGT
T ss_pred HHHHHhcchhC
Confidence 99999999874
|
| >d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Rhizome secoisolariciresinol dehydrogenase species: Mayapple (Podophyllum peltatum) [TaxId: 35933]
Probab=100.00 E-value=3.6e-52 Score=339.91 Aligned_cols=232 Identities=25% Similarity=0.307 Sum_probs=203.9
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
..|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++... ..+.+++||++|+++++++++++.++|
T Consensus 2 nrL~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 80 (268)
T d2bgka1 2 NRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSP-DVISFVHCDVTKDEDVRNLVDTTIAKH 80 (268)
T ss_dssp CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCT-TTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCC-CceEEEEccCCCHHHHHHHHHHHHHHc
Confidence 4689999999999999999999999999999999999999999999999653 458889999999999999999999999
Q ss_pred CCccEEEEcCCCCCCC--CCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCcc
Q 025672 88 GKLDILVNAAAGNFLV--PAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY 165 (249)
Q Consensus 88 ~~id~vi~~ag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~ 165 (249)
|++|++|||||..... .+.+.+.++|++.+++|+.++++++|+++|.|.+++. |+||++||..+..+.++
T Consensus 81 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~--------g~ii~iss~~~~~~~~~ 152 (268)
T d2bgka1 81 GKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKK--------GSIVFTASISSFTAGEG 152 (268)
T ss_dssp SCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTC--------EEEEEECCGGGTCCCTT
T ss_pred CCcceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCC--------CCccccccccccccccc
Confidence 9999999999987644 5778899999999999999999999999999988764 89999999988887655
Q ss_pred -chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCC--hHHHHHh-hhhhhcccCCCCHHHHHHHHH
Q 025672 166 -QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA--PEEIRSK-ATDYMAAYKFGEKWDIAMAAL 241 (249)
Q Consensus 166 -~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~dva~~v~ 241 (249)
...|++||+|+.+|+|+++.||+ ++|||||+|+||+|+|++...... ++...+. .....|.+|+++|||||++++
T Consensus 153 ~~~~Y~asKaal~~lt~~lA~el~-~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~gr~~~pedvA~~v~ 231 (268)
T d2bgka1 153 VSHVYTATKHAVLGLTTSLCTELG-EYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVADAVA 231 (268)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTCSSCSCCCCHHHHHHHHH
T ss_pred cccccchhHHHHHhCHHHHHHHhC-hhCeEEEecCCCCccChHHhhhhcCCHHHHHHHHHhccccCCCCcCHHHHHHHHH
Confidence 45899999999999999999999 999999999999999887654433 2222222 223457889999999999999
Q ss_pred HhccCCCC
Q 025672 242 YLASDAGQ 249 (249)
Q Consensus 242 ~l~s~~a~ 249 (249)
||+||+++
T Consensus 232 fL~S~~s~ 239 (268)
T d2bgka1 232 YLAGDESK 239 (268)
T ss_dssp HHHSGGGT
T ss_pred HHhChhhC
Confidence 99999864
|
| >d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein R05D8.7 species: Caenorhabditis elegans [TaxId: 6239]
Probab=100.00 E-value=1.2e-52 Score=343.29 Aligned_cols=230 Identities=24% Similarity=0.345 Sum_probs=201.4
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcC---CCeeEEEccCCCHHHHHHHHHHHH
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG---IPAIGLEGDVRKREDAVRVVESTI 84 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dl~~~~~~~~~~~~~~ 84 (249)
+.|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++.+.+ .++.++.||++|+++++++++++.
T Consensus 1 prL~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~ 80 (272)
T d1xkqa_ 1 PRFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTL 80 (272)
T ss_dssp CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHH
Confidence 35899999999999999999999999999999999999999999999997653 468999999999999999999999
Q ss_pred HHhCCccEEEEcCCCCCCCCC----CCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEec-cccc
Q 025672 85 NHFGKLDILVNAAAGNFLVPA----EDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINIS-ATLH 159 (249)
Q Consensus 85 ~~~~~id~vi~~ag~~~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~is-s~~~ 159 (249)
++||++|++|||||.....++ .+.+.++|++.+++|+.+++.++|+++|.|.++. |.+|+++ |..+
T Consensus 81 ~~~g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~---------g~iI~~~Ss~a~ 151 (272)
T d1xkqa_ 81 KQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK---------GEIVNVSSIVAG 151 (272)
T ss_dssp HHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT---------CEEEEECCGGGS
T ss_pred HHhCCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccC---------Cccccccchhcc
Confidence 999999999999998766554 3566778999999999999999999999998764 4555554 4677
Q ss_pred cccCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChH-------HHHHhhhhhhcccCCCC
Q 025672 160 YTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPE-------EIRSKATDYMAAYKFGE 232 (249)
Q Consensus 160 ~~~~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~-------~~~~~~~~~~~~~~~~~ 232 (249)
..+.++...|+++|+|+.+|+|+||.||+ ++|||||+|+||+|+|++......++ +........+|++|+++
T Consensus 152 ~~~~~~~~~Y~asKaal~~ltk~lA~el~-~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~ 230 (272)
T d1xkqa_ 152 PQAQPDFLYYAIAKAALDQYTRSTAIDLA-KFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGK 230 (272)
T ss_dssp SSCCCSSHHHHHHHHHHHHHHHHHHHHHH-TTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBC
T ss_pred ccCCCCcchhhhHHHHHHHHHHHHHHHhc-ccCeEEEEEeeCCCcchhhhccCCchHHHHHHHHHHHHHhcCCCCCCCcC
Confidence 88999999999999999999999999999 99999999999999988765443332 22334456689999999
Q ss_pred HHHHHHHHHHhccCC
Q 025672 233 KWDIAMAALYLASDA 247 (249)
Q Consensus 233 ~~dva~~v~~l~s~~ 247 (249)
|||||+++.||+|++
T Consensus 231 pediA~~v~fL~S~~ 245 (272)
T d1xkqa_ 231 PEHIANIILFLADRN 245 (272)
T ss_dssp HHHHHHHHHHHHCHH
T ss_pred HHHHHHHHHHHhCcc
Confidence 999999999999975
|
| >d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Peroxisomal trans 2-enoyl CoA reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.6e-52 Score=343.23 Aligned_cols=234 Identities=32% Similarity=0.525 Sum_probs=211.6
Q ss_pred CCCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHh-----cCCCeeEEEccCCCHHHHHHHH
Q 025672 6 KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHS-----LGIPAIGLEGDVRKREDAVRVV 80 (249)
Q Consensus 6 ~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~-----~~~~~~~~~~Dl~~~~~~~~~~ 80 (249)
.+..|+||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.. .+.++.+++||++|++++++++
T Consensus 6 ~~g~L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~ 85 (297)
T d1yxma1 6 APGLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLV 85 (297)
T ss_dssp CTTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHH
T ss_pred CCCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHH
Confidence 34569999999999999999999999999999999999999999999999864 3568999999999999999999
Q ss_pred HHHHHHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccc
Q 025672 81 ESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY 160 (249)
Q Consensus 81 ~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~ 160 (249)
+++.+.+|++|++|||||.....++.+.+.++|++.+++|+.++++++++++|.|.+++. |+||++|+. +.
T Consensus 86 ~~~~~~~G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~~--------g~Ii~~ss~-~~ 156 (297)
T d1yxma1 86 KSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHG--------GSIVNIIVP-TK 156 (297)
T ss_dssp HHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHC--------EEEEEECCC-CT
T ss_pred HHHHHHhCCeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhccccc--------ccccccccc-cc
Confidence 999999999999999999988899999999999999999999999999999999988764 888888664 55
Q ss_pred ccCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCC--hHHHHHhhhhhhcccCCCCHHHHHH
Q 025672 161 TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA--PEEIRSKATDYMAAYKFGEKWDIAM 238 (249)
Q Consensus 161 ~~~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~ 238 (249)
.+.++...|+++|+|+.+|+|++|.||+ ++|||||+|+||+|+|++...... .++..+...+.+|++|+++|||||+
T Consensus 157 ~~~~~~~~Y~asKaal~~ltk~lA~el~-~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~plgR~g~pedvA~ 235 (297)
T d1yxma1 157 AGFPLAVHSGAARAGVYNLTKSLALEWA-CSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGVPEEVSS 235 (297)
T ss_dssp TCCTTCHHHHHHHHHHHHHHHHHHHHTG-GGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGGSTTSSCBCTHHHHH
T ss_pred ccccccccchhHHHHHHHHHHHHHHHhc-ccCceEEEeeeCcCcCcchhhhccccCHHHHHHHHhcCCCCCCcCHHHHHH
Confidence 6778899999999999999999999999 999999999999999887644432 3456667778899999999999999
Q ss_pred HHHHhccCCCC
Q 025672 239 AALYLASDAGQ 249 (249)
Q Consensus 239 ~v~~l~s~~a~ 249 (249)
+++||+||+++
T Consensus 236 ~v~fL~Sd~s~ 246 (297)
T d1yxma1 236 VVCFLLSPAAS 246 (297)
T ss_dssp HHHHHHSGGGT
T ss_pred HHHHHhCchhc
Confidence 99999999864
|
| >d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase (5l265) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=100.00 E-value=4.8e-52 Score=338.49 Aligned_cols=229 Identities=28% Similarity=0.361 Sum_probs=194.2
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcC---CCeeEEEccCCCHHHHHHHHHHHHH
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG---IPAIGLEGDVRKREDAVRVVESTIN 85 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dl~~~~~~~~~~~~~~~ 85 (249)
.|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++.+.+ .++.++.+|++|+++++++++++.+
T Consensus 2 rl~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~ 81 (264)
T d1spxa_ 2 RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLG 81 (264)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHH
Confidence 4899999999999999999999999999999999999999999999997654 3589999999999999999999999
Q ss_pred HhCCccEEEEcCCCCCC----CCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccc-ccc
Q 025672 86 HFGKLDILVNAAAGNFL----VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISAT-LHY 160 (249)
Q Consensus 86 ~~~~id~vi~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~-~~~ 160 (249)
+||++|++|||||.... .++.+.+.++|++.+++|+.++++++|+++|.|+++. |.+|+++|. .+.
T Consensus 82 ~~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~---------g~iI~~~S~~~~~ 152 (264)
T d1spxa_ 82 KFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK---------GEIVNISSIASGL 152 (264)
T ss_dssp HHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT---------CEEEEECCTTSSS
T ss_pred HhCCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCcccccc---------Ccceeeeeecccc
Confidence 99999999999998643 3456678899999999999999999999999998764 566666665 567
Q ss_pred ccCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCCh-------HHHHHhhhhhhcccCCCCH
Q 025672 161 TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP-------EEIRSKATDYMAAYKFGEK 233 (249)
Q Consensus 161 ~~~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~ 233 (249)
.+.++...|++||+|+.+|+|+|+.||+ ++|||||+|+||+|+|++......+ ....+.+.+.+|++|+++|
T Consensus 153 ~~~~~~~~Y~asKaal~~lt~~lA~el~-~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~p 231 (264)
T d1spxa_ 153 HATPDFPYYSIAKAAIDQYTRNTAIDLI-QHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQP 231 (264)
T ss_dssp SCCTTSHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECCBCCCC--------------HHHHHHHHHHCTTSSCBCH
T ss_pred ccCCCchhhhhhhhhHHHHHHHHHHHhc-ccCeEEEEEeeCCCCCcchhccCCcHHHHHHHHHHHHHHHhcCCCCCCcCH
Confidence 8889999999999999999999999999 9999999999999998865433222 2334456778999999999
Q ss_pred HHHHHHHHHhccCC
Q 025672 234 WDIAMAALYLASDA 247 (249)
Q Consensus 234 ~dva~~v~~l~s~~ 247 (249)
||||+++.||+|++
T Consensus 232 edvA~~v~fL~S~~ 245 (264)
T d1spxa_ 232 QDIAEVIAFLADRK 245 (264)
T ss_dssp HHHHHHHHHHHCHH
T ss_pred HHHHHHHHHHhCCc
Confidence 99999999999954
|
| >d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Bacterial sepiapterin reductase species: Chlorobium tepidum [TaxId: 1097]
Probab=100.00 E-value=1.1e-51 Score=331.32 Aligned_cols=217 Identities=18% Similarity=0.267 Sum_probs=200.6
Q ss_pred cEEEEecCCCchhHHHHHHHHHcCCe-------EEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHH
Q 025672 13 KVALLTGGGSGIGFEISLQLGKHGAA-------IAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN 85 (249)
Q Consensus 13 k~~lItGa~~giG~~~a~~l~~~G~~-------v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 85 (249)
+++|||||++|||+++|++|+++|++ |++++|+.++++++.+++...+.++.++.||++|+++++++++++.+
T Consensus 2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~ 81 (240)
T d2bd0a1 2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVE 81 (240)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence 67999999999999999999999998 89999999999999999998888999999999999999999999999
Q ss_pred HhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCcc
Q 025672 86 HFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY 165 (249)
Q Consensus 86 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~ 165 (249)
+||++|++|||||.....++.+.+.++|++.+++|+.|+++++|+++|+|++++. |+||++||..+..+.++
T Consensus 82 ~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~--------G~Ii~isS~~~~~~~~~ 153 (240)
T d2bd0a1 82 RYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHS--------GHIFFITSVAATKAFRH 153 (240)
T ss_dssp HTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--------EEEEEECCGGGTSCCTT
T ss_pred HcCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCC--------CceEEEechhhcCCCCC
Confidence 9999999999999998899999999999999999999999999999999988764 99999999999999999
Q ss_pred chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhcc
Q 025672 166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245 (249)
Q Consensus 166 ~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s 245 (249)
.+.|++||+|+.+|+|+|+.|++ ++|||||+|+||+|+|++... ..++ ...++.+|||+|++++||++
T Consensus 154 ~~~Y~asK~al~~lt~~la~el~-~~gIrvn~i~PG~v~T~~~~~-~~~~----------~~~~~~~PedvA~~v~~l~s 221 (240)
T d2bd0a1 154 SSIYCMSKFGQRGLVETMRLYAR-KCNVRITDVQPGAVYTPMWGK-VDDE----------MQALMMMPEDIAAPVVQAYL 221 (240)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHT-TTTEEEEEEEECCBCSTTTCC-CCST----------TGGGSBCHHHHHHHHHHHHT
T ss_pred ChHHHHHHHHHHHHHHHHHHHhC-cCCeEEEEeeeCcccCchhhh-cCHh----------hHhcCCCHHHHHHHHHHHHc
Confidence 99999999999999999999999 999999999999999876433 2211 12467899999999999999
Q ss_pred CCCC
Q 025672 246 DAGQ 249 (249)
Q Consensus 246 ~~a~ 249 (249)
+.++
T Consensus 222 ~~~~ 225 (240)
T d2bd0a1 222 QPSR 225 (240)
T ss_dssp SCTT
T ss_pred CCcc
Confidence 8653
|
| >d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein F25D1.5 species: Caenorhabditis elegans [TaxId: 6239]
Probab=100.00 E-value=9.9e-52 Score=338.12 Aligned_cols=229 Identities=24% Similarity=0.323 Sum_probs=203.1
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcC---CCeeEEEccCCCHHHHHHHHHHHHH
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG---IPAIGLEGDVRKREDAVRVVESTIN 85 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dl~~~~~~~~~~~~~~~ 85 (249)
.|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++.+.+ .++.++.||++|+++++++++++.+
T Consensus 1 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 80 (274)
T d1xhla_ 1 RFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLA 80 (274)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHH
Confidence 3789999999999999999999999999999999999999999999998754 3688999999999999999999999
Q ss_pred HhCCccEEEEcCCCCCCC--CCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC
Q 025672 86 HFGKLDILVNAAAGNFLV--PAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT 163 (249)
Q Consensus 86 ~~~~id~vi~~ag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~ 163 (249)
+||+||++|||||..... ...+.+.++|++.+++|+.+++.++|+++|.|.++. +|+|+++||..+..+.
T Consensus 81 ~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~--------~g~ii~~ss~~~~~~~ 152 (274)
T d1xhla_ 81 KFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK--------GEIVNVSSIVAGPQAH 152 (274)
T ss_dssp HHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT--------CEEEEECCGGGSSSCC
T ss_pred HcCCceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccc--------cccccchhhhhccccC
Confidence 999999999999976543 445568899999999999999999999999998875 3889999999999999
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChH-------HHHHhhhhhhcccCCCCHHHH
Q 025672 164 WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPE-------EIRSKATDYMAAYKFGEKWDI 236 (249)
Q Consensus 164 ~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~dv 236 (249)
++...|+++|+|+.+|+|++|.||+ ++|||||+|+||+|+|++.......+ +..+...+.+|++|+++||||
T Consensus 153 ~~~~~Y~asKaal~~ltk~lA~ela-~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~iPlgR~g~pedi 231 (274)
T d1xhla_ 153 SGYPYYACAKAALDQYTRCTAIDLI-QHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPEEI 231 (274)
T ss_dssp TTSHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHHH
T ss_pred CCCceehhhhhHHHHHHHHHHHHHh-HhCCceeeeccCCCcCchhhhhcccchhhHHHHHHHHHHHcCCCCCCCcCHHHH
Confidence 9999999999999999999999999 99999999999999987654433221 223334566899999999999
Q ss_pred HHHHHHhccC
Q 025672 237 AMAALYLASD 246 (249)
Q Consensus 237 a~~v~~l~s~ 246 (249)
|++++||+|+
T Consensus 232 A~~v~fL~S~ 241 (274)
T d1xhla_ 232 ANIIVFLADR 241 (274)
T ss_dssp HHHHHHHHCH
T ss_pred HHHHHHHcCC
Confidence 9999999994
|
| >d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative dehydrogenase ARPG836 (MGC4172) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5e-51 Score=330.87 Aligned_cols=231 Identities=23% Similarity=0.260 Sum_probs=204.1
Q ss_pred CCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcC--CCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG--IPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 10 l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
|+||++|||||++|||+++|+.|+++|++|++++|++++++++.+++.+.+ .++.+++||++|+++++++++++.+++
T Consensus 8 lk~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~~~ 87 (257)
T d1xg5a_ 8 WRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQH 87 (257)
T ss_dssp GTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHHhc
Confidence 899999999999999999999999999999999999999999999998764 478899999999999999999999999
Q ss_pred CCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc--Ccc
Q 025672 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA--TWY 165 (249)
Q Consensus 88 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~--~~~ 165 (249)
|+||++|||||.....++.+.+.++|++.+++|+.+++++.++++|.|.++... +|+||++||..+... .+.
T Consensus 88 g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~------~g~Ii~isS~~~~~~~p~~~ 161 (257)
T d1xg5a_ 88 SGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVD------DGHIININSMSGHRVLPLSV 161 (257)
T ss_dssp CCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCC------SCEEEEECCGGGTSCCSCGG
T ss_pred CCCCEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccC------CCceEEEechHhcCCCCCcc
Confidence 999999999999988999999999999999999999999999999999876432 489999999988754 456
Q ss_pred chhhHHHHHHHHHHHHHHHHHh--cCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHh
Q 025672 166 QIHVSAAKAAVDSITRSLALEW--GTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYL 243 (249)
Q Consensus 166 ~~~y~~sK~a~~~l~~~la~e~--~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l 243 (249)
...|+++|+|+.+|+|+|+.|+ + ++||+||+|+||+++|++...... ...+......|.+|+++|||||++++||
T Consensus 162 ~~~Y~~sKaal~~ltr~la~el~~~-~~~I~vn~i~PG~i~t~~~~~~~~--~~~~~~~~~~~~~r~~~pedvA~~v~fL 238 (257)
T d1xg5a_ 162 THFYSATKYAVTALTEGLRQELREA-QTHIRATCISPGVVETQFAFKLHD--KDPEKAAATYEQMKCLKPEDVAEAVIYV 238 (257)
T ss_dssp GHHHHHHHHHHHHHHHHHHHHHHHT-TCCCEEEEEEESCBCSSHHHHHTT--TCHHHHHHHHC---CBCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHhCHHHHHHHHHhC-CCCEEEEEEeCCCCCChhhhhcCh--hhHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence 6789999999999999999998 6 789999999999999765433221 2234566778999999999999999999
Q ss_pred ccCCCC
Q 025672 244 ASDAGQ 249 (249)
Q Consensus 244 ~s~~a~ 249 (249)
+|++++
T Consensus 239 ~s~~a~ 244 (257)
T d1xg5a_ 239 LSTPAH 244 (257)
T ss_dssp HHSCTT
T ss_pred hCChhc
Confidence 999874
|
| >d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,6,8-tetrahydroxynaphthalene reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=100.00 E-value=3.4e-51 Score=332.60 Aligned_cols=231 Identities=27% Similarity=0.442 Sum_probs=208.1
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEe-CCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHH
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMG-RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~-r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 86 (249)
.+|+||++|||||++|||+++|++|+++|++|++++ |+.+.++++.+++.+.+.++.+++||++|+++++++++++.++
T Consensus 2 ~~L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~ 81 (259)
T d1ja9a_ 2 KPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSH 81 (259)
T ss_dssp CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHH
Confidence 358999999999999999999999999999999875 4555578899999988999999999999999999999999999
Q ss_pred hCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccc-cccCcc
Q 025672 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH-YTATWY 165 (249)
Q Consensus 87 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~-~~~~~~ 165 (249)
+|+||++|||||.....++.+.+.++|++.+++|+.++++++|+++|.|+++ +++++++|..+ ..+.++
T Consensus 82 ~g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~----------g~~iii~s~~~~~~~~~~ 151 (259)
T d1ja9a_ 82 FGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRG----------GRIILTSSIAAVMTGIPN 151 (259)
T ss_dssp HSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEE----------EEEEEECCGGGTCCSCCS
T ss_pred cCCCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcC----------CcccccccccccccCCCC
Confidence 9999999999999888999999999999999999999999999999999764 66777766555 446889
Q ss_pred chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccccccc-----------CCCChHHHHHhhhhhhcccCCCCHH
Q 025672 166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGV-----------SKLAPEEIRSKATDYMAAYKFGEKW 234 (249)
Q Consensus 166 ~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (249)
+..|+++|+|+.+|+|+|++||+ ++|||||+|+||+++|++.. ....++++.+.+.+..|++|+++|+
T Consensus 152 ~~~Y~asK~al~~l~r~lA~e~~-~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~p~ 230 (259)
T d1ja9a_ 152 HALYAGSKAAVEGFCRAFAVDCG-AKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPA 230 (259)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTSTTSSCBCHH
T ss_pred chhHHHHHHHHHHHHHHHHHHHh-hcCeEEeccCcCCccChhhhhhhhhhhhhhcccCCHHHHHHHHHhCCCCCCCcCHH
Confidence 99999999999999999999999 89999999999999987532 1234567788888999999999999
Q ss_pred HHHHHHHHhccCCCC
Q 025672 235 DIAMAALYLASDAGQ 249 (249)
Q Consensus 235 dva~~v~~l~s~~a~ 249 (249)
|||++++||+||+++
T Consensus 231 eVa~~v~fL~S~~a~ 245 (259)
T d1ja9a_ 231 DIGRAVSALCQEESE 245 (259)
T ss_dssp HHHHHHHHHHSGGGT
T ss_pred HHHHHHHHHhCchhc
Confidence 999999999999874
|
| >d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=3.3e-51 Score=332.33 Aligned_cols=231 Identities=23% Similarity=0.252 Sum_probs=199.7
Q ss_pred CCCCCCcEEEEecCCC--chhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHH
Q 025672 7 GDILKGKVALLTGGGS--GIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTI 84 (249)
Q Consensus 7 ~~~l~~k~~lItGa~~--giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 84 (249)
+.+|+||++|||||+| |||+++|++|+++|++|++++|+++..+.. +++...+.+..++++|++|+++++++++++.
T Consensus 3 ~~~L~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~-~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~ 81 (256)
T d1ulua_ 3 TVDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEA-EKLAEALGGALLFRADVTQDEELDALFAGVK 81 (256)
T ss_dssp EECCTTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHH-HHHHHHTTCCEEEECCTTCHHHHHHHHHHHH
T ss_pred CcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHH-HHhhhccCcccccccccCCHHHHHHHHHHHH
Confidence 4579999999999986 999999999999999999999987655544 4444445577889999999999999999999
Q ss_pred HHhCCccEEEEcCCCCCC----CCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccc
Q 025672 85 NHFGKLDILVNAAAGNFL----VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY 160 (249)
Q Consensus 85 ~~~~~id~vi~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~ 160 (249)
+++|++|++|||||.... .++.+.+.++|+..+++|+.+++.+++++.|.|.+. |+||++||..+.
T Consensus 82 ~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~----------G~Iv~isS~~~~ 151 (256)
T d1ulua_ 82 EAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREG----------GGIVTLTYYASE 151 (256)
T ss_dssp HHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEE----------EEEEEEECGGGT
T ss_pred HhcCCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccC----------CEEEEEeehHhc
Confidence 999999999999998642 456778899999999999999999999999988653 889999999999
Q ss_pred ccCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHH
Q 025672 161 TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAA 240 (249)
Q Consensus 161 ~~~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v 240 (249)
.+.++...|+++|+|+.+|+|++|.||+ ++|||||+|+||+++|++.......++..+.+.+..|++|+++|||||+++
T Consensus 152 ~~~~~~~~Y~asKaal~~ltr~lA~ela-~~gIrVN~I~PG~i~t~~~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v 230 (256)
T d1ulua_ 152 KVVPKYNVMAIAKAALEASVRYLAYELG-PKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPLRRNITQEEVGNLG 230 (256)
T ss_dssp SBCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECCC----------CHHHHHHHHHHSTTSSCCCHHHHHHHH
T ss_pred CCCCCchHHHHHHHHHHHHHHHHHHHhc-ccCCEEeeeccceeeeccccchhhhHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence 9999999999999999999999999999 999999999999999887666666677888888999999999999999999
Q ss_pred HHhccCCCC
Q 025672 241 LYLASDAGQ 249 (249)
Q Consensus 241 ~~l~s~~a~ 249 (249)
.||+||+++
T Consensus 231 ~fL~S~~s~ 239 (256)
T d1ulua_ 231 LFLLSPLAS 239 (256)
T ss_dssp HHHHSGGGT
T ss_pred HHHhCchhC
Confidence 999999874
|
| >d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase species: Pseudomonas sp., lb400 [TaxId: 306]
Probab=100.00 E-value=7e-51 Score=333.40 Aligned_cols=225 Identities=24% Similarity=0.328 Sum_probs=197.6
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
|+|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++ +.++.++.+|++++++++++++++.+++
T Consensus 1 M~L~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~---~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 77 (276)
T d1bdba_ 1 MKLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDH---GDNVLGIVGDVRSLEDQKQAASRCVARF 77 (276)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---GGGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc---CCCeeEEecccccHHHHHHHHHHHHHHh
Confidence 4589999999999999999999999999999999999998888877766 4578999999999999999999999999
Q ss_pred CCccEEEEcCCCCCCC-----CCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc
Q 025672 88 GKLDILVNAAAGNFLV-----PAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 162 (249)
Q Consensus 88 ~~id~vi~~ag~~~~~-----~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~ 162 (249)
|++|++|||||+.... ...+.+.++|++.+++|+.++++++|+++|.|++++ |+||+++|..+..+
T Consensus 78 g~idilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~---------g~iI~i~S~~~~~~ 148 (276)
T d1bdba_ 78 GKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASR---------GNVIFTISNAGFYP 148 (276)
T ss_dssp SCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT---------CEEEEECCGGGTST
T ss_pred CCcccccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcC---------CCceeeeechhccC
Confidence 9999999999976533 224445567999999999999999999999998763 88999999999999
Q ss_pred CccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCC--------CChHHHHHhhhhhhcccCCCCHH
Q 025672 163 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK--------LAPEEIRSKATDYMAAYKFGEKW 234 (249)
Q Consensus 163 ~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~ 234 (249)
.++.+.|+++|+|+.+|+|+||.||+ ++ ||||+|+||+|+|++.... ...++..+.+...+|++|+++||
T Consensus 149 ~~~~~~Y~asKaal~~ltr~lA~ela-~~-IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~pe 226 (276)
T d1bdba_ 149 NGGGPLYTAAKHAIVGLVRELAFELA-PY-VRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSVLPIGRMPEVE 226 (276)
T ss_dssp TSSCHHHHHHHHHHHHHHHHHHHHHT-TT-CEEEEEEECCCCSCCCCCGGGC---------CHHHHHTTTCTTSSCCCGG
T ss_pred CCCCchHHHHHHHHHHHHHHHHHHhh-cc-eEEcccCCCCEecCcCCccchhhhhhccCcHHHHHHHHhcCCCCCCcCHH
Confidence 99999999999999999999999998 75 9999999999998754322 12334556778889999999999
Q ss_pred HHHHHHHHhccC
Q 025672 235 DIAMAALYLASD 246 (249)
Q Consensus 235 dva~~v~~l~s~ 246 (249)
|+|++++||+|+
T Consensus 227 eva~~v~fL~S~ 238 (276)
T d1bdba_ 227 EYTGAYVFFATR 238 (276)
T ss_dssp GGSHHHHHHHCH
T ss_pred HHHHHHHHHcCC
Confidence 999999999984
|
| >d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Halohydrin dehalogenase HheC species: Agrobacterium tumefaciens [TaxId: 358]
Probab=100.00 E-value=2.6e-51 Score=331.84 Aligned_cols=221 Identities=18% Similarity=0.226 Sum_probs=200.1
Q ss_pred EEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCccEE
Q 025672 14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDIL 93 (249)
Q Consensus 14 ~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~v 93 (249)
|+|||||++|||+++|++|+++|++|++++|+.+.++++...... +.++|++++++++++++++.++||+||++
T Consensus 2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~~~~------~~~~dv~~~~~~~~~~~~~~~~~G~iDiL 75 (252)
T d1zmta1 2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAET------YPQLKPMSEQEPAELIEAVTSAYGQVDVL 75 (252)
T ss_dssp EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHH------CTTSEECCCCSHHHHHHHHHHHHSCCCEE
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhhhCc------EEEeccCCHHHHHHHHHHHHHHcCCCCEE
Confidence 899999999999999999999999999999999888877654432 35689999999999999999999999999
Q ss_pred EEcCCCCC-CCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhhHHH
Q 025672 94 VNAAAGNF-LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAA 172 (249)
Q Consensus 94 i~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~~s 172 (249)
|||||+.. ..++.+.+.++|++.+++|+.++++++|+++|.|.+++. |+||++||..+..+.++...|+++
T Consensus 76 VnNAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~--------G~IV~isS~~~~~~~~~~~~Y~as 147 (252)
T d1zmta1 76 VSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKS--------GHIIFITSATPFGPWKELSTYTSA 147 (252)
T ss_dssp EEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--------CEEEEECCSTTTSCCTTCHHHHHH
T ss_pred EECCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhccccc--------ceeecccccccccccccccccccc
Confidence 99999865 478899999999999999999999999999999988764 999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCC------hHHHHHhhhhhhcccCCCCHHHHHHHHHHhccC
Q 025672 173 KAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA------PEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246 (249)
Q Consensus 173 K~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~ 246 (249)
|+|+.+|+|+|++||+ ++|||||+|+||+|+|++...... .++..+.+.+.+|++|+++|||||++++||+||
T Consensus 148 Kaal~~lt~~lA~ela-~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~e~~~~~~~~~pl~R~g~pedvA~~v~fL~S~ 226 (252)
T d1zmta1 148 RAGACTLANALSKELG-EYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQRLGTQKELGELVAFLASG 226 (252)
T ss_dssp HHHHHHHHHHHHHHHG-GGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHSSSSSCBCHHHHHHHHHHHHTT
T ss_pred cccHHHHHHHHHHHhc-ccCcEEEEEecCCCcCcchhhhhhcccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCc
Confidence 9999999999999999 999999999999999876544322 345667788889999999999999999999999
Q ss_pred CCC
Q 025672 247 AGQ 249 (249)
Q Consensus 247 ~a~ 249 (249)
+++
T Consensus 227 ~s~ 229 (252)
T d1zmta1 227 SCD 229 (252)
T ss_dssp SCG
T ss_pred hhc
Confidence 874
|
| >d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 15-hydroxyprostaglandin dehydrogenase, PGDH species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.8e-51 Score=329.11 Aligned_cols=225 Identities=29% Similarity=0.362 Sum_probs=199.3
Q ss_pred CCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhc--CCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 10 l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
+.||++|||||++|||+++|++|+++|++|++++|+.+++++..+++... +.++.+++||++|+++++++++++.+++
T Consensus 1 i~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 80 (254)
T d2gdza1 1 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHF 80 (254)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHc
Confidence 46999999999999999999999999999999999999999999988654 4578999999999999999999999999
Q ss_pred CCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch
Q 025672 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 167 (249)
Q Consensus 88 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~ 167 (249)
|++|++|||||... .++|++.+++|+.+++.++++++|+|.++..+ .+|+||++||..+..+.++.+
T Consensus 81 G~iDilVnnAg~~~--------~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~-----~~g~Iv~isS~~~~~~~~~~~ 147 (254)
T d2gdza1 81 GRLDILVNNAGVNN--------EKNWEKTLQINLVSVISGTYLGLDYMSKQNGG-----EGGIIINMSSLAGLMPVAQQP 147 (254)
T ss_dssp SCCCEEEECCCCCC--------SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTC-----CCEEEEEECCGGGTSCCTTCH
T ss_pred CCcCeecccccccc--------cccchheeeeehhhHHHHHHHHHHHHHHhhcC-----CCcEEEeeccHhhccCCCCcc
Confidence 99999999999753 34589999999999999999999999776432 258999999999999999999
Q ss_pred hhHHHHHHHHHHHHH--HHHHhcCCCCeEEEEEecCccccccccCCCChH------HHHHhhhhhhcccCCCCHHHHHHH
Q 025672 168 HVSAAKAAVDSITRS--LALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPE------EIRSKATDYMAAYKFGEKWDIAMA 239 (249)
Q Consensus 168 ~y~~sK~a~~~l~~~--la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~dva~~ 239 (249)
.|++||+|+.+|+|+ |+.|++ ++|||||+|+||+|+|++.......+ +..+.+.+.+|++|+++|||||++
T Consensus 148 ~Y~asKaal~~ltrs~ala~e~~-~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~ 226 (254)
T d2gdza1 148 VYCASKHGIVGFTRSAALAANLM-NSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIANG 226 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH-TCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHHHHHHHCCBCHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHhc-CCCEEEEEEEcCCCCChhhhhccccccccccHHHHHHHHhcCCCCCCcCHHHHHHH
Confidence 999999999999997 788999 99999999999999987654433322 234456678899999999999999
Q ss_pred HHHhccCCC
Q 025672 240 ALYLASDAG 248 (249)
Q Consensus 240 v~~l~s~~a 248 (249)
++||+|+++
T Consensus 227 v~fL~s~~~ 235 (254)
T d2gdza1 227 LITLIEDDA 235 (254)
T ss_dssp HHHHHHCTT
T ss_pred HHHHHcCCC
Confidence 999999864
|
| >d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus, TTHB020 [TaxId: 274]
Probab=100.00 E-value=8.5e-51 Score=326.51 Aligned_cols=224 Identities=26% Similarity=0.377 Sum_probs=195.4
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhC
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 88 (249)
.|+||++|||||++|||+++|++|+++|++|++++|+.+++++..+ +.+.++.+++||++++++++++++++.+.+|
T Consensus 2 ~l~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~---~~~~~~~~~~~Dls~~~~i~~~~~~i~~~~g 78 (241)
T d2a4ka1 2 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVA---ALEAEAIAVVADVSDPKAVEAVFAEALEEFG 78 (241)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH---TCCSSEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred cCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH---HcCCceEEEEecCCCHHHHHHHHHHHHHHhC
Confidence 5899999999999999999999999999999999999877765554 4467899999999999999999999999999
Q ss_pred CccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchh
Q 025672 89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH 168 (249)
Q Consensus 89 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~ 168 (249)
++|++|||||.....++.+.+.++|++.+++|+.+++.++|+++|+|.++ +.|+++||. +..+.++...
T Consensus 79 ~iDiLinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~----------~~i~~~ss~-a~~~~~~~~~ 147 (241)
T d2a4ka1 79 RLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEG----------GSLVLTGSV-AGLGAFGLAH 147 (241)
T ss_dssp CCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTT----------CEEEEECCC-TTCCHHHHHH
T ss_pred CccEeccccccccccchhhhhccccccccccccccccccccccccccccc----------cceeecccc-ccccccCccc
Confidence 99999999999888999999999999999999999999999999988664 445555554 5556678999
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhccCCC
Q 025672 169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAG 248 (249)
Q Consensus 169 y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~a 248 (249)
|+++|+|+.+|+|+||+||+ ++|||||+|+||+++|++. ... +++..+.+.+..|++|+++|+|||++++||+||++
T Consensus 148 Y~~sK~al~~lt~~lA~el~-~~gIrvN~I~PG~v~T~~~-~~~-~~~~~~~~~~~~p~~r~~~p~dva~~v~fL~S~~s 224 (241)
T d2a4ka1 148 YAAGKLGVVGLARTLALELA-RKGVRVNVLLPGLIQTPMT-AGL-PPWAWEQEVGASPLGRAGRPEEVAQAALFLLSEES 224 (241)
T ss_dssp HHHCSSHHHHHHHHHHHHHT-TTTCEEEEEEECSBCCGGG-TTS-CHHHHHHHHHTSTTCSCBCHHHHHHHHHHHHSGGG
T ss_pred cchhhHHHHHHHHHHHHHHh-HhCCEEeeeccCcCCCHHH-Hhh-hHhHHHHHHhCCCCCCCcCHHHHHHHHHHHhcchh
Confidence 99999999999999999999 9999999999999998754 333 34566677888999999999999999999999986
Q ss_pred C
Q 025672 249 Q 249 (249)
Q Consensus 249 ~ 249 (249)
+
T Consensus 225 ~ 225 (241)
T d2a4ka1 225 A 225 (241)
T ss_dssp T
T ss_pred C
Confidence 4
|
| >d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=100.00 E-value=1.3e-49 Score=325.43 Aligned_cols=232 Identities=32% Similarity=0.475 Sum_probs=205.2
Q ss_pred CCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCC-cchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHH
Q 025672 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR-KTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN 85 (249)
Q Consensus 7 ~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~-~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 85 (249)
..+|+||++|||||++|||+++|++|+++|++|++++|+ ++.++++.+++...+.++.++++|++|+++++++++++.+
T Consensus 13 ~~sL~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~ 92 (272)
T d1g0oa_ 13 SASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVK 92 (272)
T ss_dssp GGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CcCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHHH
Confidence 345999999999999999999999999999999999887 4557888889988888999999999999999999999999
Q ss_pred HhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccc-ccCc
Q 025672 86 HFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY-TATW 164 (249)
Q Consensus 86 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~-~~~~ 164 (249)
.+|++|++|||+|.....++.+.+.++|++.+++|+.+++.+++++.|.|.++ |++++++|..+. .+.+
T Consensus 93 ~~g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~----------g~~i~i~s~~~~~~~~~ 162 (272)
T d1g0oa_ 93 IFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIG----------GRLILMGSITGQAKAVP 162 (272)
T ss_dssp HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTT----------CEEEEECCGGGTCSSCS
T ss_pred HhCCCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeeccccccccccc----------ccccccccccccccccc
Confidence 99999999999999888899999999999999999999999999999999764 778888887654 4567
Q ss_pred cchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccC----------CCChHHHHH-hhhhhhcccCCCCH
Q 025672 165 YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVS----------KLAPEEIRS-KATDYMAAYKFGEK 233 (249)
Q Consensus 165 ~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~----------~~~~~~~~~-~~~~~~~~~~~~~~ 233 (249)
+...|+++|+|+.+|+|++|+||+ ++|||||+|+||+|+|++... ....++..+ .....+|++|+++|
T Consensus 163 ~~~~Y~asKaal~~ltk~lA~e~~-~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~~~p 241 (272)
T d1g0oa_ 163 KHAVYSGSKGAIETFARCMAIDMA-DKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLP 241 (272)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCTTCSCBCH
T ss_pred chhhHHHHHHHHHHHHHHHHHHhc-hhCeEEEEEccCCcCChHHHHHHHhhhhcccccchHHHHHHHHHccCCCCCCcCH
Confidence 788899999999999999999999 899999999999999875321 122333322 45678999999999
Q ss_pred HHHHHHHHHhccCCCC
Q 025672 234 WDIAMAALYLASDAGQ 249 (249)
Q Consensus 234 ~dva~~v~~l~s~~a~ 249 (249)
+|||++++||+|++++
T Consensus 242 eevA~~v~fL~s~~s~ 257 (272)
T d1g0oa_ 242 IDIARVVCFLASNDGG 257 (272)
T ss_dssp HHHHHHHHHHHSGGGT
T ss_pred HHHHHHHHHHhCchhc
Confidence 9999999999999864
|
| >d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=1.5e-49 Score=318.08 Aligned_cols=215 Identities=22% Similarity=0.303 Sum_probs=191.8
Q ss_pred CCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCC
Q 025672 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK 89 (249)
Q Consensus 10 l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 89 (249)
|+||++|||||++|||+++|++|+++|++|++++|+++.+++ . ...++.||+++. ++.+.+++++
T Consensus 2 LkgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~~-------~--~~~~~~~Dv~~~------~~~~~~~~g~ 66 (234)
T d1o5ia_ 2 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKR-------S--GHRYVVCDLRKD------LDLLFEKVKE 66 (234)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-------T--CSEEEECCTTTC------HHHHHHHSCC
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHh-------c--CCcEEEcchHHH------HHHHHHHhCC
Confidence 689999999999999999999999999999999999765442 2 245788999874 3445567899
Q ss_pred ccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhh
Q 025672 90 LDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHV 169 (249)
Q Consensus 90 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y 169 (249)
+|++|||||.....++.+.+.++|++.+++|+.++++++|+++|.|+++.. |+||+++|..+..+.++...|
T Consensus 67 iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~--------G~ii~i~S~~~~~~~~~~~~Y 138 (234)
T d1o5ia_ 67 VDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGW--------GRIVAITSFSVISPIENLYTS 138 (234)
T ss_dssp CSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--------EEEEEECCGGGTSCCTTBHHH
T ss_pred CcEEEecccccCCcchhhhhhHHHHHHhhhhhhhhhhhhhccccccccccc--------ccccccccccccccccccccc
Confidence 999999999988889999999999999999999999999999999988764 999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhccCCCC
Q 025672 170 SAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGQ 249 (249)
Q Consensus 170 ~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~a~ 249 (249)
+++|+|+.+|+|++|+||+ ++|||||+|+||+++|++..... +++..+.+.+..|++|+++|||+|++++||+||+++
T Consensus 139 ~asKaal~~ltk~lA~ela-~~gIrVN~I~PG~v~T~~~~~~~-~~~~~~~~~~~~pl~R~~~pediA~~v~fL~S~~s~ 216 (234)
T d1o5ia_ 139 NSARMALTGFLKTLSFEVA-PYGITVNCVAPGWTETERVKELL-SEEKKKQVESQIPMRRMAKPEEIASVVAFLCSEKAS 216 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCCTTHHHHS-CHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGT
T ss_pred hhHHHHHHHHHHHHHHHhc-ccCeEEeecccCccchhhhhhhc-CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhChhhc
Confidence 9999999999999999999 99999999999999987655444 345567788889999999999999999999999874
|
| >d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 17-beta-hydroxysteroid dehydrogenase type XI species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.7e-49 Score=316.30 Aligned_cols=218 Identities=17% Similarity=0.191 Sum_probs=198.6
Q ss_pred CCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHH
Q 025672 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (249)
Q Consensus 7 ~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 86 (249)
..+++||++|||||++|||+++|++|+++|++|++++|+.++++++.+++...+.++.++.||++|+++++++++++.+.
T Consensus 2 ~~~l~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~ 81 (244)
T d1yb1a_ 2 RKSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAE 81 (244)
T ss_dssp CCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHH
Confidence 45799999999999999999999999999999999999999999999999988999999999999999999999999999
Q ss_pred hCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccc
Q 025672 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ 166 (249)
Q Consensus 87 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~ 166 (249)
+|++|++|||||.....++.+.+.+.|++++++|+.|+++++++++|.|.+++. |+||++||..+..+.+++
T Consensus 82 ~g~idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~--------G~Iv~isS~~~~~~~~~~ 153 (244)
T d1yb1a_ 82 IGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNH--------GHIVTVASAAGHVSVPFL 153 (244)
T ss_dssp TCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTC--------EEEEEECCCC-CCCHHHH
T ss_pred cCCCceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCC--------ceEEEeecchhcCCCCCc
Confidence 999999999999998888889999999999999999999999999999998764 999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcC--CCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhc
Q 025672 167 IHVSAAKAAVDSITRSLALEWGT--DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLA 244 (249)
Q Consensus 167 ~~y~~sK~a~~~l~~~la~e~~~--~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~ 244 (249)
+.|++||+|+.+|+++|+.|+++ ..||+||+|+||+|+|++... . ..+..+..+|||+++.+...+
T Consensus 154 ~~Y~asKaal~~~~~~La~El~~~~~~gI~V~~i~PG~v~T~~~~~-~-----------~~~~~~~~~pe~va~~i~~~~ 221 (244)
T d1yb1a_ 154 LAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKN-P-----------STSLGPTLEPEEVVNRLMHGI 221 (244)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTC-T-----------HHHHCCCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCEEEEEEEcCCCCChhhhC-c-----------CccccCCCCHHHHHHHHHHHH
Confidence 99999999999999999999861 268999999999999875422 1 123456789999999988755
|
| >d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR) species: Human (Homo sapiens), [TaxId: 9606]
Probab=100.00 E-value=2.5e-48 Score=321.37 Aligned_cols=236 Identities=32% Similarity=0.518 Sum_probs=210.2
Q ss_pred CCCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHH-hcCCCeeEEEccCCCHHHHHHHHHHHH
Q 025672 6 KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALH-SLGIPAIGLEGDVRKREDAVRVVESTI 84 (249)
Q Consensus 6 ~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 84 (249)
++.+|+||++|||||++|||+++|++|+++|++|++++|+.+++++..+++. ..+.++.+++||++++++++++++.+.
T Consensus 19 ~~~~l~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~ 98 (294)
T d1w6ua_ 19 PPNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELI 98 (294)
T ss_dssp CTTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhhh
Confidence 3457999999999999999999999999999999999999999999888885 447789999999999999999999999
Q ss_pred HHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCc
Q 025672 85 NHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW 164 (249)
Q Consensus 85 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~ 164 (249)
+.++++|++|||||.....++.+.+.++|...+.+|+.+.+.+.+...+.+..... ++.+++++|..+..+.+
T Consensus 99 ~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~-------~~~i~~~ss~~~~~~~~ 171 (294)
T d1w6ua_ 99 KVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQK-------GAAFLSITTIYAETGSG 171 (294)
T ss_dssp HHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC-------CEEEEEECCTHHHHCCT
T ss_pred hhccccchhhhhhhhccccccccchhhhhhhheeeecccchhhhhhhhcccccccc-------cccccccccchhhhccc
Confidence 99999999999999988888899999999999999999999999988887765443 47788999999999999
Q ss_pred cchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCC-hHHHHHhhhhhhcccCCCCHHHHHHHHHHh
Q 025672 165 YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA-PEEIRSKATDYMAAYKFGEKWDIAMAALYL 243 (249)
Q Consensus 165 ~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~v~~l 243 (249)
+..+|+++|+|+.+|+|.+|+|++ ++|||||+|+||+|+|++...... .+...+...+.+|++|+++|||||+++.||
T Consensus 172 ~~~~YsasKaal~~ltk~lA~ela-~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~pl~R~~~pediA~~v~fL 250 (294)
T d1w6ua_ 172 FVVPSASAKAGVEAMSKSLAAEWG-KYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPCGRLGTVEELANLAAFL 250 (294)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECCBCC------CCTTSHHHHHHHTTCTTSSCBCHHHHHHHHHHH
T ss_pred ccchHHHHHHHHHHHHHHHHHHHh-HhCeEEEEEccCccccchhhhccCCcHHHHHHHhhcCCCCCCCCHHHHHHHHHHH
Confidence 999999999999999999999999 999999999999999887654433 345667788899999999999999999999
Q ss_pred ccCCCC
Q 025672 244 ASDAGQ 249 (249)
Q Consensus 244 ~s~~a~ 249 (249)
|||+++
T Consensus 251 ~sd~s~ 256 (294)
T d1w6ua_ 251 CSDYAS 256 (294)
T ss_dssp TSGGGT
T ss_pred hCchhc
Confidence 999864
|
| >d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=6.9e-49 Score=324.72 Aligned_cols=219 Identities=21% Similarity=0.266 Sum_probs=193.4
Q ss_pred CCCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCc---------chHHHHHHHHHhcCCCeeEEEccCCCHHHH
Q 025672 6 KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK---------TVLRSAVAALHSLGIPAIGLEGDVRKREDA 76 (249)
Q Consensus 6 ~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~---------~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~ 76 (249)
++|.|+||++|||||++|||+++|++|+++|++|++.+|+. +.++++.+++... ...+.+|++|.+++
T Consensus 1 sPm~l~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~d~~~~~~~ 77 (302)
T d1gz6a_ 1 SPLRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRR---GGKAVANYDSVEAG 77 (302)
T ss_dssp CCCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHT---TCEEEEECCCGGGH
T ss_pred CCcCcCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhc---ccccccccchHHHH
Confidence 35679999999999999999999999999999999987653 3456667776553 44677899999999
Q ss_pred HHHHHHHHHHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecc
Q 025672 77 VRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISA 156 (249)
Q Consensus 77 ~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss 156 (249)
+++++++.+.+|+||++|||||+....++.+.+.++|++.+++|+.++++++|+++|.|++++. |+||++||
T Consensus 78 ~~~v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~--------G~IV~isS 149 (302)
T d1gz6a_ 78 EKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNY--------GRIIMTAS 149 (302)
T ss_dssp HHHHHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC--------EEEEEECC
T ss_pred HHHHHHHHHHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCC--------cEEEEeCC
Confidence 9999999999999999999999998899999999999999999999999999999999998764 99999999
Q ss_pred ccccccCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHH
Q 025672 157 TLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDI 236 (249)
Q Consensus 157 ~~~~~~~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv 236 (249)
..+..+.++...|++||+|+.+|+|+|+.|++ ++|||||+|+||++.| ++..... ++ +.+..+||||
T Consensus 150 ~~~~~~~~~~~~Y~asKaal~~lt~~la~E~~-~~gIrVN~I~PG~~~t-~~~~~~~-~~----------~~~~~~Pedv 216 (302)
T d1gz6a_ 150 ASGIYGNFGQANYSAAKLGLLGLANTLVIEGR-KNNIHCNTIAPNAGSR-MTETVMP-ED----------LVEALKPEYV 216 (302)
T ss_dssp HHHHHCCTTCHHHHHHHHHHHHHHHHHHHHTG-GGTEEEEEEEEECCST-TTGGGSC-HH----------HHHHSCGGGT
T ss_pred hhhcCCCCCcHHHHHHHHHHHHHHHHHHHHHh-ccCCceeeeCCCCCCc-chhhcCc-Hh----------hHhcCCHHHH
Confidence 99999999999999999999999999999999 9999999999999964 3333332 22 2346789999
Q ss_pred HHHHHHhccCCC
Q 025672 237 AMAALYLASDAG 248 (249)
Q Consensus 237 a~~v~~l~s~~a 248 (249)
|.+++|||||.+
T Consensus 217 A~~v~fL~S~~a 228 (302)
T d1gz6a_ 217 APLVLWLCHESC 228 (302)
T ss_dssp HHHHHHHTSTTC
T ss_pred HHHHHHHcCCCc
Confidence 999999999875
|
| >d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dehydrogenase/reductase SDR family member 6, DHRS6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.3e-48 Score=311.45 Aligned_cols=223 Identities=25% Similarity=0.301 Sum_probs=196.6
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhC
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 88 (249)
.|+||++|||||++|||+++|+.|+++|++|++++|++++++++.+ ...+....+|+.+.+.++.+. +.++
T Consensus 3 ~l~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~-----~~~~~~~~~d~~~~~~~~~~~----~~~~ 73 (245)
T d2ag5a1 3 RLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEK-----YPGIQTRVLDVTKKKQIDQFA----NEVE 73 (245)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGG-----STTEEEEECCTTCHHHHHHHH----HHCS
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-----ccCCceeeeeccccccccccc----cccc
Confidence 3899999999999999999999999999999999999877665443 235778889999877666554 4568
Q ss_pred CccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccc-ccCccch
Q 025672 89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY-TATWYQI 167 (249)
Q Consensus 89 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~-~~~~~~~ 167 (249)
++|++|||+|.....++.+.+.++|++.+++|+.+++.+++++.|.|.++.. |+||+++|..+. .+.+...
T Consensus 74 ~id~lVn~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~--------g~Ii~isS~~~~~~~~~~~~ 145 (245)
T d2ag5a1 74 RLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKS--------GNIINMSSVASSVKGVVNRC 145 (245)
T ss_dssp CCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--------EEEEEECCSBTTTBCCTTBH
T ss_pred cceeEEecccccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCC--------ceeeeeechhhccCCccchh
Confidence 9999999999999899999999999999999999999999999999988764 899999998764 5778899
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccC----CCChHHHHHhhhhhhcccCCCCHHHHHHHHHHh
Q 025672 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVS----KLAPEEIRSKATDYMAAYKFGEKWDIAMAALYL 243 (249)
Q Consensus 168 ~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l 243 (249)
.|+++|+|+.+|+|+||.||+ ++|||||+|+||+|+|++... ...++...+.+.+..|++|+++|||+++++.||
T Consensus 146 ~Y~~sKaal~~l~r~lA~e~~-~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~pedva~~v~fL 224 (245)
T d2ag5a1 146 VYSTTKAAVIGLTKSVAADFI-QQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAMLCVYL 224 (245)
T ss_dssp HHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCTTSSCEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhh-hhCcEEEEEeeceeechhhHhhhhhhhhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence 999999999999999999999 999999999999999876542 234566777888899999999999999999999
Q ss_pred ccCCCC
Q 025672 244 ASDAGQ 249 (249)
Q Consensus 244 ~s~~a~ 249 (249)
+||+++
T Consensus 225 ~s~~s~ 230 (245)
T d2ag5a1 225 ASDESA 230 (245)
T ss_dssp HSGGGT
T ss_pred hChhhC
Confidence 999864
|
| >d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sepiapterin reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=3e-47 Score=309.39 Aligned_cols=231 Identities=20% Similarity=0.168 Sum_probs=203.0
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHH---cCCeEEEEeCCcchHHHHHHHHHhc--CCCeeEEEccCCCHHHHHHHHHH
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGK---HGAAIAIMGRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVES 82 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~---~G~~v~l~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~ 82 (249)
..|+||+++||||++|||+++|++|++ +|++|++++|++++++++.+++... +.++.+++||++|+++++++++.
T Consensus 2 ~~L~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~ 81 (259)
T d1oaaa_ 2 DGLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSA 81 (259)
T ss_dssp CCCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHH
Confidence 358899999999999999999999986 7999999999999999999999754 45789999999999999999998
Q ss_pred HHHH----hCCccEEEEcCCCCC---CCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEec
Q 025672 83 TINH----FGKLDILVNAAAGNF---LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINIS 155 (249)
Q Consensus 83 ~~~~----~~~id~vi~~ag~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~is 155 (249)
+.+. ++.+|++|||||... ..++.+.++++|++++++|+.++++++++++|+|.+++. .+|+||++|
T Consensus 82 ~~~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~------~~g~Iv~is 155 (259)
T d1oaaa_ 82 VRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPG------LSKTVVNIS 155 (259)
T ss_dssp HHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTT------CEEEEEEEC
T ss_pred HHHhhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCC------Ccccccccc
Confidence 8763 457999999999754 356778999999999999999999999999999987542 138999999
Q ss_pred cccccccCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccC---CCChHHHHHhhhhhhcccCCCC
Q 025672 156 ATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVS---KLAPEEIRSKATDYMAAYKFGE 232 (249)
Q Consensus 156 s~~~~~~~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 232 (249)
|..+..+.+++..|++||+|+.+|+|+|+.| .+|||||+|+||+|+|++... ....++..+.+....|.+|+++
T Consensus 156 S~~~~~~~~~~~~Y~asKaal~~lt~~la~e---~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 232 (259)
T d1oaaa_ 156 SLCALQPYKGWGLYCAGKAARDMLYQVLAAE---EPSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSDGALVD 232 (259)
T ss_dssp CGGGTSCCTTCHHHHHHHHHHHHHHHHHHHH---CTTEEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHHHHHHTTCSBC
T ss_pred cccccCCCccchHHHHHHHHHHHHHHHHHhC---CCCCEEEEEEcCCCCCHHHHHhhhcCCCHHHHHHHHhcCCCCCCCC
Confidence 9999999999999999999999999999998 458999999999999876432 2234566677788889999999
Q ss_pred HHHHHHHHHHhccCC
Q 025672 233 KWDIAMAALYLASDA 247 (249)
Q Consensus 233 ~~dva~~v~~l~s~~ 247 (249)
|+|+|+.++||+++.
T Consensus 233 p~evA~~i~~ll~~~ 247 (259)
T d1oaaa_ 233 CGTSAQKLLGLLQKD 247 (259)
T ss_dssp HHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhhhc
Confidence 999999999999864
|
| >d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Drosophila alcohol dehydrogenase species: Fly (Drosophila lebanonensis) [TaxId: 7225]
Probab=100.00 E-value=7.7e-47 Score=305.50 Aligned_cols=225 Identities=20% Similarity=0.163 Sum_probs=189.1
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhc-CCCeeEEEccCC-CHHHHHHHHHHHHH
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL-GIPAIGLEGDVR-KREDAVRVVESTIN 85 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dl~-~~~~~~~~~~~~~~ 85 (249)
|+|+||++|||||++|||+++|++|+++|++|++++|+.++.+.+.+..... +.++.++.+|++ +.++++++++++.+
T Consensus 1 m~l~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 80 (254)
T d1sbya1 1 MDLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFD 80 (254)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHH
Confidence 5799999999999999999999999999999999999888776665544333 457899999998 67789999999999
Q ss_pred HhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCcc
Q 025672 86 HFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY 165 (249)
Q Consensus 86 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~ 165 (249)
++|+||+||||||. .+.++|++++++|+.|+++++++++|.|.+++.+ .+|+||++||..+..+.++
T Consensus 81 ~~g~iDilvnnAG~--------~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~-----~~g~Ii~isS~~~~~~~~~ 147 (254)
T d1sbya1 81 QLKTVDILINGAGI--------LDDHQIERTIAINFTGLVNTTTAILDFWDKRKGG-----PGGIIANICSVTGFNAIHQ 147 (254)
T ss_dssp HHSCCCEEEECCCC--------CCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTC-----CCEEEEEECCGGGTSCCTT
T ss_pred HcCCCCEEEeCCCC--------CCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccC-----CCceEEEEechhhccCCCC
Confidence 99999999999995 3567899999999999999999999999775431 2599999999999999999
Q ss_pred chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhcc
Q 025672 166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245 (249)
Q Consensus 166 ~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s 245 (249)
+..|++||+|+.+|+++|+.|++ ++|||||+|+||+|+|++.......++..+.+.......+..+||++|++++++++
T Consensus 148 ~~~Y~asKaal~~~t~~la~el~-~~gIrVn~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~va~~~~~~~~ 226 (254)
T d1sbya1 148 VPVYSASKAAVVSFTNSLAKLAP-ITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLLSHPTQTSEQCGQNFVKAIE 226 (254)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHH-HHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHHTTSCCEEHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHhhcc-ccCeEEEEEEeCCCcCccccccccchhHHHHHHhccccCCCCCHHHHHHHHHHhhh
Confidence 99999999999999999999998 89999999999999987644333333333333333334456689999999988775
Q ss_pred C
Q 025672 246 D 246 (249)
Q Consensus 246 ~ 246 (249)
.
T Consensus 227 ~ 227 (254)
T d1sbya1 227 A 227 (254)
T ss_dssp H
T ss_pred C
Confidence 3
|
| >d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.5e-46 Score=305.40 Aligned_cols=225 Identities=22% Similarity=0.235 Sum_probs=186.3
Q ss_pred CcEEEEecCCCchhHHHHHHHHHcCCeEEE---EeCCcchHHHH---HHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHH
Q 025672 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAI---MGRRKTVLRSA---VAALHSLGIPAIGLEGDVRKREDAVRVVESTIN 85 (249)
Q Consensus 12 ~k~~lItGa~~giG~~~a~~l~~~G~~v~l---~~r~~~~~~~~---~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 85 (249)
.|++|||||++|||+++|+.|+++|++|++ +.|+.+..+++ .+++...+.++.++.||++|+++++++++++.
T Consensus 2 kkVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~- 80 (285)
T d1jtva_ 2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVT- 80 (285)
T ss_dssp CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCT-
T ss_pred CCEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhcc-
Confidence 689999999999999999999999997544 45555544444 44444557789999999999999999998774
Q ss_pred HhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCcc
Q 025672 86 HFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY 165 (249)
Q Consensus 86 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~ 165 (249)
.+.+|++|||+|.....++.+.+.++|++.+++|+.|+++++++++|.|.+++. |+||++||..+..+.++
T Consensus 81 -~g~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~--------G~Iv~isS~~g~~~~~~ 151 (285)
T d1jtva_ 81 -EGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGS--------GRVLVTGSVGGLMGLPF 151 (285)
T ss_dssp -TSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC--------EEEEEEEEGGGTSCCTT
T ss_pred -ccchhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCC--------CceEEEechhhcCCCCC
Confidence 389999999999988889999999999999999999999999999999988764 99999999999999999
Q ss_pred chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCCh-HHH------------HHh--hhhhhcccCC
Q 025672 166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP-EEI------------RSK--ATDYMAAYKF 230 (249)
Q Consensus 166 ~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~-~~~------------~~~--~~~~~~~~~~ 230 (249)
...|++||+|+.+|+++|+.|++ ++||+||+|+||+|+|++....... ++. .+. .....+..+.
T Consensus 152 ~~~Y~asKaal~~l~~~la~El~-~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (285)
T d1jtva_ 152 NDVYCASKFALEGLCESLAVLLL-PFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFREAA 230 (285)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred chHHHHHHHHHHHHHHHHHHHhh-ccCcEEEEEecCCCCChHHHHhccCHHHHhhccchhHHHHHHHHHHHHhhhhcccC
Confidence 99999999999999999999999 9999999999999998765443321 111 111 1233556788
Q ss_pred CCHHHHHHHHHHhccCC
Q 025672 231 GEKWDIAMAALYLASDA 247 (249)
Q Consensus 231 ~~~~dva~~v~~l~s~~ 247 (249)
.+|||||++++++++..
T Consensus 231 ~~PeeVA~~v~~~~~~~ 247 (285)
T d1jtva_ 231 QNPEEVAEVFLTALRAP 247 (285)
T ss_dssp BCHHHHHHHHHHHHHCS
T ss_pred CCHHHHHHHHHHHHhCC
Confidence 99999999999998643
|
| >d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.9e-45 Score=294.04 Aligned_cols=230 Identities=23% Similarity=0.326 Sum_probs=197.5
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhC
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 88 (249)
+|+||++|||||++|||+++|++|+++|++|++++|+.+++++..+++ +.......+|+.+.++++..+..+...++
T Consensus 2 slkGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (248)
T d2o23a1 2 SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL---GNNCVFAPADVTSEKDVQTALALAKGKFG 78 (248)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh---CCCcccccccccccccccccccccccccc
Confidence 689999999999999999999999999999999999999999888877 45788999999999999999999999999
Q ss_pred CccEEEEcCCCCCC------CCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc
Q 025672 89 KLDILVNAAAGNFL------VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 162 (249)
Q Consensus 89 ~id~vi~~ag~~~~------~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~ 162 (249)
.+|.+++|++.... .++.+.+.++|++.+++|+.+++++++++.|.|..+.... ...+|+||++||..+..+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~--~~~~G~Ii~isS~~~~~~ 156 (248)
T d2o23a1 79 RVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQ--GGQRGVIINTASVAAFEG 156 (248)
T ss_dssp CCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCT--TSCCEEEEEECCTHHHHC
T ss_pred cccccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhc--cCCceEEEEecchhhccC
Confidence 99999999876432 3556778899999999999999999999999997653211 123589999999999999
Q ss_pred CccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcc-cCCCCHHHHHHHHH
Q 025672 163 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAA-YKFGEKWDIAMAAL 241 (249)
Q Consensus 163 ~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~v~ 241 (249)
.++.+.|+++|+|+.+|+|+|++|++ ++|||||+|+||+++|++... . +++..+.+.+.+|+ +|+++|||||++++
T Consensus 157 ~~~~~~Y~asKaal~~lt~~la~e~~-~~gIrvN~I~PG~i~T~~~~~-~-~~~~~~~~~~~~pl~~R~g~peevA~~v~ 233 (248)
T d2o23a1 157 QVGQAAYSASKGGIVGMTLPIARDLA-PIGIRVMTIAPGLFGTPLLTS-L-PEKVCNFLASQVPFPSRLGDPAEYAHLVQ 233 (248)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECCBCCC------------CHHHHTCSSSCSCBCHHHHHHHHH
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHhc-ccCcceeeeccCceecchhhc-C-CHHHHHHHHhcCCCCCCCcCHHHHHHHHH
Confidence 99999999999999999999999999 999999999999999875433 2 34555667777886 89999999999999
Q ss_pred HhccC
Q 025672 242 YLASD 246 (249)
Q Consensus 242 ~l~s~ 246 (249)
||+|.
T Consensus 234 fL~s~ 238 (248)
T d2o23a1 234 AIIEN 238 (248)
T ss_dssp HHHHC
T ss_pred HHHhC
Confidence 99974
|
| >d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=5.5e-44 Score=289.91 Aligned_cols=229 Identities=21% Similarity=0.210 Sum_probs=201.8
Q ss_pred CCCCcEEEEecCCC--chhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHH
Q 025672 9 ILKGKVALLTGGGS--GIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (249)
Q Consensus 9 ~l~~k~~lItGa~~--giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 86 (249)
.|+||++|||||++ |||+++|+.|+++|++|++++|+++..+.+ +++.....+...+.+|+++..++...+.++.+.
T Consensus 2 ~L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (258)
T d1qsga_ 2 FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRV-EEFAAQLGSDIVLQCDVAEDASIDTMFAELGKV 80 (258)
T ss_dssp TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHH-HHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTT
T ss_pred cCCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHHHhhcCCcceeecccchHHHHHHHHHHhhhc
Confidence 47899999999998 899999999999999999999996654444 455444556788899999999999999999999
Q ss_pred hCCccEEEEcCCCCCCCCC-----CCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc
Q 025672 87 FGKLDILVNAAAGNFLVPA-----EDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT 161 (249)
Q Consensus 87 ~~~id~vi~~ag~~~~~~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~ 161 (249)
++++|++|||++......+ .....+.|...+++|+.+++.+++.+.+.+.+. +.|+++||..+..
T Consensus 81 ~~~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~Ii~iss~~~~~ 150 (258)
T d1qsga_ 81 WPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPG----------SALLTLSYLGAER 150 (258)
T ss_dssp CSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEE----------EEEEEEECGGGTS
T ss_pred ccccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCC----------cEEEEecchhhcc
Confidence 9999999999998654332 345567799999999999999999999988553 6799999999999
Q ss_pred cCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHH
Q 025672 162 ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAAL 241 (249)
Q Consensus 162 ~~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~ 241 (249)
+.++...|++||+|+.+|+|++|+||+ ++|||||+|+||+|+|++.......+...+...+.+|++|+++|||||+++.
T Consensus 151 ~~~~~~~Y~~sKaal~~ltr~lA~el~-~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~R~~~peeia~~v~ 229 (258)
T d1qsga_ 151 AIPNYNVMGLAKASLEANVRYMANAMG-PEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAA 229 (258)
T ss_dssp BCTTTTHHHHHHHHHHHHHHHHHHHHT-TTTEEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHHHHHHHHH
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHHhC-ccCceeecccccccccccccccchhhhHHHHHHhCCCCCCCcCHHHHHHHHH
Confidence 999999999999999999999999999 9999999999999998877666667777888889999999999999999999
Q ss_pred HhccCCCC
Q 025672 242 YLASDAGQ 249 (249)
Q Consensus 242 ~l~s~~a~ 249 (249)
||+||+++
T Consensus 230 fL~s~~s~ 237 (258)
T d1qsga_ 230 FLCSDLSA 237 (258)
T ss_dssp HHTSGGGT
T ss_pred HHhCchhc
Confidence 99999764
|
| >d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3e-44 Score=294.03 Aligned_cols=205 Identities=25% Similarity=0.315 Sum_probs=181.7
Q ss_pred cEEEEecCCCchhHHHHHHHHHc-CCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCcc
Q 025672 13 KVALLTGGGSGIGFEISLQLGKH-GAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD 91 (249)
Q Consensus 13 k~~lItGa~~giG~~~a~~l~~~-G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 91 (249)
+++|||||++|||+++|++|+++ |++|++++|+.++++++.+++.+.+.++.+++||++|.++++++++++.+++|+||
T Consensus 4 rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g~iD 83 (275)
T d1wmaa1 4 HVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGGLD 83 (275)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSSEE
T ss_pred eEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhcCCcE
Confidence 56699999999999999999986 89999999999999999999998888999999999999999999999999999999
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC--------
Q 025672 92 ILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT-------- 163 (249)
Q Consensus 92 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~-------- 163 (249)
++|||||+....+..+.+.++|+.++++|+.|++.+++.++|.|+++ |+||++||..+..+.
T Consensus 84 iLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~----------g~ivnisS~~~~~~~~~~~~y~~ 153 (275)
T d1wmaa1 84 VLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQ----------GRVVNVSSIMSVRALKSCSPELQ 153 (275)
T ss_dssp EEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEE----------EEEEEECCHHHHHHHHTSCHHHH
T ss_pred EEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----------CCcccccccceeccccccchhhh
Confidence 99999999888888888889999999999999999999999999653 889999997664321
Q ss_pred ---------------------------------ccchhhHHHHHHHHHHHHHHHHHhcC---CCCeEEEEEecCcccccc
Q 025672 164 ---------------------------------WYQIHVSAAKAAVDSITRSLALEWGT---DYAIRVNGIAPGPIKDTA 207 (249)
Q Consensus 164 ---------------------------------~~~~~y~~sK~a~~~l~~~la~e~~~---~~gi~v~~v~pG~v~t~~ 207 (249)
.+...|++||+++.+|++.+++||++ ..||+||+|+||+|+|++
T Consensus 154 ~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~sK~a~~~~t~~la~~l~~~~~~~~I~vn~v~PG~v~T~m 233 (275)
T d1wmaa1 154 QKFRSETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDM 233 (275)
T ss_dssp HHHHCSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTT
T ss_pred hhhcccccchhhhccccccchhcccccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecccccCCc
Confidence 12356999999999999999999861 359999999999999876
Q ss_pred ccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhc
Q 025672 208 GVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLA 244 (249)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~ 244 (249)
.... ...+|||+|++++|++
T Consensus 234 ~~~~-----------------~~~~pee~A~~~~~~a 253 (275)
T d1wmaa1 234 AGPK-----------------ATKSPEEGAETPVYLA 253 (275)
T ss_dssp TCTT-----------------CSBCHHHHTHHHHHHH
T ss_pred ccCc-----------------ccCCHHHHHHHHHHHH
Confidence 4321 2458999999999986
|
| >d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 11-beta-hydroxysteroid dehydrogenase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.1e-42 Score=282.08 Aligned_cols=196 Identities=23% Similarity=0.289 Sum_probs=180.7
Q ss_pred CCCCCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHH-hcCCCeeEEEccCCCHHHHHHHHHH
Q 025672 4 PFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALH-SLGIPAIGLEGDVRKREDAVRVVES 82 (249)
Q Consensus 4 ~~~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~ 82 (249)
+..+..|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++. ..+..+.++.+|+++.++++.+++.
T Consensus 6 ~f~~~~L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 85 (269)
T d1xu9a_ 6 EFRPEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQ 85 (269)
T ss_dssp CCCGGGGTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHH
T ss_pred cCCccccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHH
Confidence 345556999999999999999999999999999999999999999999988875 4466788999999999999999999
Q ss_pred HHHHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc
Q 025672 83 TINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 162 (249)
Q Consensus 83 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~ 162 (249)
+.+.++.+|+++||+|.....++.+.+.++|++++++|+.+++.+++.++|.|++. +|+||++||..+..+
T Consensus 86 ~~~~~g~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~---------~G~ii~isS~~~~~~ 156 (269)
T d1xu9a_ 86 AGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQS---------NGSIVVVSSLAGKVA 156 (269)
T ss_dssp HHHHHTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH---------TCEEEEEEEGGGTSC
T ss_pred HHHHhCCccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhc---------CCcceEeccchhcCC
Confidence 99999999999999999888888899999999999999999999999999999765 389999999999999
Q ss_pred CccchhhHHHHHHHHHHHHHHHHHhc-CCCCeEEEEEecCccccccc
Q 025672 163 TWYQIHVSAAKAAVDSITRSLALEWG-TDYAIRVNGIAPGPIKDTAG 208 (249)
Q Consensus 163 ~~~~~~y~~sK~a~~~l~~~la~e~~-~~~gi~v~~v~pG~v~t~~~ 208 (249)
.++...|++||+|+.+|+++|+.|++ .+.||+||+|+||+|+|++.
T Consensus 157 ~p~~~~Y~asKaal~~~~~~La~El~~~~~~I~V~~v~PG~v~T~~~ 203 (269)
T d1xu9a_ 157 YPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETA 203 (269)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHH
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHhhhcCCCEEEEEEecCcCCCcHH
Confidence 99999999999999999999999986 24579999999999998754
|
| >d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Leishmania major [TaxId: 5664]
Probab=100.00 E-value=1.3e-42 Score=285.38 Aligned_cols=230 Identities=21% Similarity=0.280 Sum_probs=186.2
Q ss_pred cEEEEecCCCchhHHHHHHHHHcCCeEEEEeCC-cchHHHHHHHHHhc-CCCeeE-----------------EEccCCCH
Q 025672 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR-KTVLRSAVAALHSL-GIPAIG-----------------LEGDVRKR 73 (249)
Q Consensus 13 k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~-~~~~~~~~~~~~~~-~~~~~~-----------------~~~Dl~~~ 73 (249)
.++|||||++|||+++|++|+++|++|++++++ ++..+++.+++... +..... +.+|++++
T Consensus 3 pVAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv~~~ 82 (284)
T d1e7wa_ 3 PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLF 82 (284)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccccccccCCCH
Confidence 478999999999999999999999999998765 55577788888643 333333 45669999
Q ss_pred HHHHHHHHHHHHHhCCccEEEEcCCCCCCCCCCCCCHHHHH--------------HHHhhhhHHHHHHHHHHHHHHHhcC
Q 025672 74 EDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFR--------------TVIEIDSVGTFIMCHEALKYLKKGG 139 (249)
Q Consensus 74 ~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~--------------~~~~~n~~~~~~l~~~~~~~~~~~~ 139 (249)
++++++++++.+++|+||++|||||.....++.+.+.++|+ ..+.+|+.+++++.+.+.+.+....
T Consensus 83 ~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~ 162 (284)
T d1e7wa_ 83 TRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTP 162 (284)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSC
T ss_pred HHHHHHHHHHHHHhCCCCEEEecCCccCCCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccchhhhhH
Confidence 99999999999999999999999999887777776665554 4789999999999999998875322
Q ss_pred CCCCCCCCCceEEEeccccccccCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHH
Q 025672 140 RGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRS 219 (249)
Q Consensus 140 ~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~ 219 (249)
... ....++|++++|.....+.++...|+++|+|+.+|+|++|+||+ ++|||||+|+||++.+.. .. +++..+
T Consensus 163 ~~~--~~~~~~ii~~~s~~~~~~~~~~~~Y~asKaal~~lt~~lA~el~-~~gIrvN~I~PG~t~~~~---~~-~~~~~~ 235 (284)
T d1e7wa_ 163 AKH--RGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELA-PLQIRVNGVGPGLSVLVD---DM-PPAVWE 235 (284)
T ss_dssp GGG--SCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEESSBCCGG---GS-CHHHHH
T ss_pred HHh--cCCCCcccccccccccCCccceeeeccccccchhhhHHHHHHhC-Cccccccccccccccccc---cC-CHHHHH
Confidence 110 11248899999999999999999999999999999999999999 999999999999976432 22 345666
Q ss_pred hhhhhhcc-cCCCCHHHHHHHHHHhccCCCC
Q 025672 220 KATDYMAA-YKFGEKWDIAMAALYLASDAGQ 249 (249)
Q Consensus 220 ~~~~~~~~-~~~~~~~dva~~v~~l~s~~a~ 249 (249)
......|+ +|+++|||||+++.||+|++++
T Consensus 236 ~~~~~~pl~~R~~~peeiA~~v~fL~S~~s~ 266 (284)
T d1e7wa_ 236 GHRSKVPLYQRDSSAAEVSDVVIFLCSSKAK 266 (284)
T ss_dssp HHHTTCTTTTSCBCHHHHHHHHHHHHSGGGT
T ss_pred HHHhcCCCCCCCCCHHHHHHHHHHHhCchhc
Confidence 67777775 9999999999999999999864
|
| >d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=100.00 E-value=3.4e-43 Score=294.52 Aligned_cols=228 Identities=21% Similarity=0.200 Sum_probs=189.6
Q ss_pred CCcEEEEec--CCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhc-C-----------CCeeEE----------
Q 025672 11 KGKVALLTG--GGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL-G-----------IPAIGL---------- 66 (249)
Q Consensus 11 ~~k~~lItG--a~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~-~-----------~~~~~~---------- 66 (249)
.+|++|||| +++|||+++|+.|+++|++|++++++.............. . ......
T Consensus 1 n~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (329)
T d1uh5a_ 1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAN 80 (329)
T ss_dssp CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTCSSGG
T ss_pred CCcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccceehhhc
Confidence 379999999 6689999999999999999999998877555444433211 0 001122
Q ss_pred ----------EccCCCHHHHHHHHHHHHHHhCCccEEEEcCCCCCC--CCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHH
Q 025672 67 ----------EGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL--VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKY 134 (249)
Q Consensus 67 ----------~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 134 (249)
.+|+++.++++++++++.+.||+||++|||+|.... +++.+.+.++|.+.+++|+.+++.++|+++|+
T Consensus 81 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~~~ 160 (329)
T d1uh5a_ 81 DIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNI 160 (329)
T ss_dssp GCCHHHHTSHHHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred ccchhhhhhhhhhhhhHHHHHHHHHHHHHHhCCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHHHHhh
Confidence 357789999999999999999999999999997653 57889999999999999999999999999999
Q ss_pred HHhcCCCCCCCCCCceEEEeccccccccCcc-chhhHHHHHHHHHHHHHHHHHhcCC-CCeEEEEEecCcccccccc---
Q 025672 135 LKKGGRGQASSSSGGIIINISATLHYTATWY-QIHVSAAKAAVDSITRSLALEWGTD-YAIRVNGIAPGPIKDTAGV--- 209 (249)
Q Consensus 135 ~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~-~~~y~~sK~a~~~l~~~la~e~~~~-~gi~v~~v~pG~v~t~~~~--- 209 (249)
|.+. |+||++||..+..+.|+ ...|+++|+|+++|+|+||.||+ + +|||||+|+||+|+|+...
T Consensus 161 m~~~----------GsIv~iss~~~~~~~p~y~~~y~asKaal~~ltr~lA~Ela-~~~gIRVNaI~PG~i~T~a~~~i~ 229 (329)
T d1uh5a_ 161 MKPQ----------SSIISLTYHASQKVVPGYGGGMSSAKAALESDTRVLAYHLG-RNYNIRINTISAGPLKSRAATAIN 229 (329)
T ss_dssp EEEE----------EEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHH-HHHCCEEEEEEECCCCCTTGGGCC
T ss_pred cccc----------cccccceeehhcccccccchhhhhhhccccccchhhHHHHh-cccCcEEEEEecCcccchhhhccc
Confidence 9653 88999999998888776 56799999999999999999998 6 6999999999999984211
Q ss_pred ----------------------------------------CCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhccCCCC
Q 025672 210 ----------------------------------------SKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGQ 249 (249)
Q Consensus 210 ----------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~a~ 249 (249)
.....++..+...+..|++|+++|||||.+++||+||+++
T Consensus 230 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~~~pedvA~~v~fLaSd~s~ 309 (329)
T d1uh5a_ 230 KLNNTYENNTNQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLRQKLLSTDIGSVASFLLSRESR 309 (329)
T ss_dssp ------------------------------------------CHHHHHHHHHHHHSSSCSCCCHHHHHHHHHHHHSGGGT
T ss_pred chhhhhhhhhhhhhccccccccccccccccccchhhhhhhcccchHHHHHHHhccCCCCCCcCHHHHHHHHHHHhCchhC
Confidence 1122456677788889999999999999999999999864
|
| >d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=100.00 E-value=2.2e-42 Score=285.84 Aligned_cols=233 Identities=24% Similarity=0.231 Sum_probs=189.6
Q ss_pred CCCCCCcEEEEecCCC--chhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhc---------CC--Ce-eEEEcc---
Q 025672 7 GDILKGKVALLTGGGS--GIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL---------GI--PA-IGLEGD--- 69 (249)
Q Consensus 7 ~~~l~~k~~lItGa~~--giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~---------~~--~~-~~~~~D--- 69 (249)
+++|+||++|||||++ |||+++|++|+++|++|++++|+.............. +. .. ....+|
T Consensus 3 ~~~L~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (297)
T d1d7oa_ 3 PIDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVF 82 (297)
T ss_dssp CCCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTC
T ss_pred CcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhhc
Confidence 5779999999999875 9999999999999999999998765433332222110 00 00 122232
Q ss_pred -----------------CCCHHHHHHHHHHHHHHhCCccEEEEcCCCCC--CCCCCCCCHHHHHHHHhhhhHHHHHHHHH
Q 025672 70 -----------------VRKREDAVRVVESTINHFGKLDILVNAAAGNF--LVPAEDLSPNGFRTVIEIDSVGTFIMCHE 130 (249)
Q Consensus 70 -----------------l~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~ 130 (249)
.++..+++++++++.++||+||++|||||... ..++.+.+.++|.+.+++|+.+++.++++
T Consensus 83 ~~~~~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~ 162 (297)
T d1d7oa_ 83 DNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSH 162 (297)
T ss_dssp CSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHH
T ss_pred cccccchhhhhhhhhhhhccHHHHHHHHHHHHHHhCCCcccccccccccccccchhhhhcccccccccchhhhhhhhhhH
Confidence 35666789999999999999999999999864 46788999999999999999999999999
Q ss_pred HHHHHHhcCCCCCCCCCCceEEEeccccccc-cCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccccccc
Q 025672 131 ALKYLKKGGRGQASSSSGGIIINISATLHYT-ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGV 209 (249)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~-~~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~ 209 (249)
+++.+.++ +.++++++..... ..+....|+++|+++.++++.++.|++.++|||||+|+||+++|++..
T Consensus 163 ~~~~~~~~----------g~~~~~~~~~~~~~~~~~~~~y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~PG~i~T~~~~ 232 (297)
T d1d7oa_ 163 FLPIMNPG----------GASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAK 232 (297)
T ss_dssp HGGGEEEE----------EEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSS
T ss_pred HHHHhhcC----------CcceeeeehhhcccccccccceecccccccccccccchhccccceEEecccccccccchhhh
Confidence 99888664 5566666655443 446677899999999999999999996257999999999999998776
Q ss_pred CCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhccCCCC
Q 025672 210 SKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGQ 249 (249)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~a~ 249 (249)
.....++..+...+..|++|+++|||||++++||+||+++
T Consensus 233 ~~~~~~~~~~~~~~~~PlgR~~~peevA~~v~fL~S~~a~ 272 (297)
T d1d7oa_ 233 AIGFIDTMIEYSYNNAPIQKTLTADEVGNAAAFLVSPLAS 272 (297)
T ss_dssp CCSHHHHHHHHHHHHSSSCCCBCHHHHHHHHHHHTSGGGT
T ss_pred hccCCHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCchhc
Confidence 6666677888888999999999999999999999999864
|
| >d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase sniffer species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=100.00 E-value=1.5e-41 Score=273.95 Aligned_cols=196 Identities=19% Similarity=0.197 Sum_probs=168.8
Q ss_pred cEEEEecCCCchhHHHHHHHH---HcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHH--Hh
Q 025672 13 KVALLTGGGSGIGFEISLQLG---KHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN--HF 87 (249)
Q Consensus 13 k~~lItGa~~giG~~~a~~l~---~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~--~~ 87 (249)
|++|||||++|||+++|++|+ ++|++|++++|++++++++.+... .+.++.++.||++|+++++++++++.+ .+
T Consensus 3 KtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~ 81 (248)
T d1snya_ 3 NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAK-NHSNIHILEIDLRNFDAYDKLVADIEGVTKD 81 (248)
T ss_dssp SEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHH-HCTTEEEEECCTTCGGGHHHHHHHHHHHHGG
T ss_pred CEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHh-cCCcEEEEEEEeccHHHHHHHHhhhHHHhhc
Confidence 789999999999999999996 579999999999999988765444 466899999999999999999999854 67
Q ss_pred CCccEEEEcCCCCCC-CCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCC---CCCCCCCceEEEeccccccc--
Q 025672 88 GKLDILVNAAAGNFL-VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRG---QASSSSGGIIINISATLHYT-- 161 (249)
Q Consensus 88 ~~id~vi~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~---~~~~~~~g~iv~iss~~~~~-- 161 (249)
+++|++|||||+... .++.+.+.++|++++++|+.|++.++++++|.|+++... .......|++|+++|..+..
T Consensus 82 ~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~g~~~~ 161 (248)
T d1snya_ 82 QGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQG 161 (248)
T ss_dssp GCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCSTT
T ss_pred CCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhccccccccccccccccccccccccCC
Confidence 899999999998654 467788999999999999999999999999999764221 12233469999999987754
Q ss_pred -cCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccC
Q 025672 162 -ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVS 210 (249)
Q Consensus 162 -~~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~ 210 (249)
+.++..+|++||+|+.+|+++++.|++ ++||+||+|+||+|+|++...
T Consensus 162 ~~~~~~~~Y~aSKaal~~lt~~la~e~~-~~gI~vn~v~PG~v~T~m~~~ 210 (248)
T d1snya_ 162 NTDGGMYAYRTSKSALNAATKSLSVDLY-PQRIMCVSLHPGWVKTDMGGS 210 (248)
T ss_dssp CCSCCCHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEECCCSBCSTTTCT
T ss_pred CCCCChHHHHHHHHHHHHHHHHHHHHhC-CCCeEEEEcCCCcccCCcccc
Confidence 345677999999999999999999998 899999999999999886543
|
| >d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Helicobacter pylori [TaxId: 210]
Probab=100.00 E-value=2.4e-41 Score=276.60 Aligned_cols=229 Identities=24% Similarity=0.231 Sum_probs=184.1
Q ss_pred CCCCcEEEEecCCC--chhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHH
Q 025672 9 ILKGKVALLTGGGS--GIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (249)
Q Consensus 9 ~l~~k~~lItGa~~--giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 86 (249)
.|+||++|||||+| |||+++|++|+++|++|++++|+++ +++..+++...+....++.+|++++++++++++++.+.
T Consensus 2 ~L~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~-~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 80 (274)
T d2pd4a1 2 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKD 80 (274)
T ss_dssp TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHhhCCceeEeeecccchhhHHHHHHHHHHH
Confidence 47999999999765 9999999999999999999999854 55556666666777889999999999999999999999
Q ss_pred hCCccEEEEcCCCCCCCCC----CCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc
Q 025672 87 FGKLDILVNAAAGNFLVPA----EDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 162 (249)
Q Consensus 87 ~~~id~vi~~ag~~~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~ 162 (249)
+|++|++|+|+|....... .....+.+...+.++..+.+.+.+...+.+.. ++.|+++|+.....+
T Consensus 81 ~g~id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~i~~~s~~~~~~~ 150 (274)
T d2pd4a1 81 LGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNN----------GASVLTLSYLGSTKY 150 (274)
T ss_dssp TSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE----------EEEEEEEECGGGTSB
T ss_pred cCCCCeEEeecccccccccccccccccchhhhhhhcccccccccccccccccccc----------Ccceeeecccccccc
Confidence 9999999999998654322 22333334444444444444444433332211 255777777777778
Q ss_pred CccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHH
Q 025672 163 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALY 242 (249)
Q Consensus 163 ~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~ 242 (249)
.+....|+++|+|+.+|+|+++.|++ ++|||||+|+||+++|++.......++.........|.+|+++|+|||++++|
T Consensus 151 ~~~~~~y~asK~al~~ltr~lA~e~~-~~GIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedIA~~v~f 229 (274)
T d2pd4a1 151 MAHYNVMGLAKAALESAVRYLAVDLG-KHHIRVNALSAGPIRTLASSGIADFRMILKWNEINAPLRKNVSLEEVGNAGMY 229 (274)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHHHHH-TTTCEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHH
T ss_pred cccchhhhHHHHHHHHHHHhhHHHhc-CcCceecccccCcccCccccccCchHHHHHHHhhhhhccCCcCHHHHHHHHHH
Confidence 88889999999999999999999999 99999999999999988766666667777778888999999999999999999
Q ss_pred hccCCCC
Q 025672 243 LASDAGQ 249 (249)
Q Consensus 243 l~s~~a~ 249 (249)
|+||+++
T Consensus 230 L~S~~s~ 236 (274)
T d2pd4a1 230 LLSSLSS 236 (274)
T ss_dssp HHSGGGT
T ss_pred HhChhhC
Confidence 9999763
|
| >d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative carbonyl reductase sniffer species: Caenorhabditis elegans [TaxId: 6239]
Probab=100.00 E-value=2.3e-40 Score=267.25 Aligned_cols=215 Identities=18% Similarity=0.187 Sum_probs=171.0
Q ss_pred CCCcEEEEecCCCchhHHHHHHHHHcCC--eEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 10 LKGKVALLTGGGSGIGFEISLQLGKHGA--AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 10 l~~k~~lItGa~~giG~~~a~~l~~~G~--~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
|+.|++|||||++|||+++|++|+++|+ +|++++|+.++++++.++ .+.++.+++||++|+++++++++++.+.+
T Consensus 1 M~~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~~---~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~ 77 (250)
T d1yo6a1 1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSI---KDSRVHVLPLTVTCDKSLDTFVSKVGEIV 77 (250)
T ss_dssp CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTC---CCTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CcCCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHh---hCCceEEEEEecCCHHHHHHHHHHHHHHh
Confidence 4579999999999999999999999996 688999999888776532 35689999999999999999999999987
Q ss_pred C--CccEEEEcCCCCC-CCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCC---CCCCCCCCceEEEeccccccc
Q 025672 88 G--KLDILVNAAAGNF-LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR---GQASSSSGGIIINISATLHYT 161 (249)
Q Consensus 88 ~--~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~---~~~~~~~~g~iv~iss~~~~~ 161 (249)
+ ++|++|||||+.. ..++.+.+.++|++++++|+.|++++++.++|+|+++.. ....+...++++++++.....
T Consensus 78 ~~~~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~~~ 157 (250)
T d1yo6a1 78 GSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSI 157 (250)
T ss_dssp GGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCS
T ss_pred CCCCeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceeccccccccccccc
Confidence 6 4999999999865 467788999999999999999999999999999976432 222344468899998876543
Q ss_pred c-------CccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHH
Q 025672 162 A-------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKW 234 (249)
Q Consensus 162 ~-------~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (249)
. ..+..+|++||+|+.+|+++|+.||+ +.||+||+|+||+|+|++.... ...+||
T Consensus 158 ~~~~~~~~~~~~~aY~aSKaal~~l~~~la~el~-~~gI~v~~i~PG~v~T~m~~~~-----------------~~~~~e 219 (250)
T d1yo6a1 158 TDNTSGSAQFPVLAYRMSKAAINMFGRTLAVDLK-DDNVLVVNFCPGWVQTNLGGKN-----------------AALTVE 219 (250)
T ss_dssp TTCCSTTSSSCBHHHHHHHHHHHHHHHHHHHHTG-GGTCEEEEEECCCC------------------------------H
T ss_pred cCCcccccchhHHHHHHHHHHHHHHHHHHHHHhc-ccCeEEEEEecCCCCCCCCCCC-----------------CCCCHH
Confidence 3 23456799999999999999999998 8999999999999998754221 124667
Q ss_pred HHHHHHHHhcc
Q 025672 235 DIAMAALYLAS 245 (249)
Q Consensus 235 dva~~v~~l~s 245 (249)
|.++.++.++.
T Consensus 220 ~~a~~~~~~~~ 230 (250)
T d1yo6a1 220 QSTAELISSFN 230 (250)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHHh
Confidence 77777666654
|
| >d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=1.4e-40 Score=266.19 Aligned_cols=208 Identities=15% Similarity=0.062 Sum_probs=178.5
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhC--
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG-- 88 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~-- 88 (249)
+||++|||||++|||+++|++|+++|++|+++++++.+ .......+.+|.++.++.+.+.+.+.+.++
T Consensus 1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (236)
T d1dhra_ 1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENE----------EASASVIVKMTDSFTEQADQVTAEVGKLLGDQ 70 (236)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCT----------TSSEEEECCCCSCHHHHHHHHHHHHHHHHTTC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccc----------cccccceeecccCcHHHHHHHHHHHHHHhCCC
Confidence 58999999999999999999999999999999987653 123456778899999999999888877654
Q ss_pred CccEEEEcCCCCCC-CCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch
Q 025672 89 KLDILVNAAAGNFL-VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 167 (249)
Q Consensus 89 ~id~vi~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~ 167 (249)
++|++|||||.... .++.+.+.++|++.+++|+.++++++++++|+|++. |+||++||..+..+.++..
T Consensus 71 ~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~----------G~Iv~isS~~~~~~~~~~~ 140 (236)
T d1dhra_ 71 KVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEG----------GLLTLAGAKAALDGTPGMI 140 (236)
T ss_dssp CEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE----------EEEEEECCGGGGSCCTTBH
T ss_pred CceEEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccc----------cceeEEccHHHcCCccCCc
Confidence 79999999997544 455667779999999999999999999999999653 8999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHhcC-CCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhccC
Q 025672 168 HVSAAKAAVDSITRSLALEWGT-DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246 (249)
Q Consensus 168 ~y~~sK~a~~~l~~~la~e~~~-~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~ 246 (249)
.|++||+|+.+|+|+|+.|++. ++||+||+|+||+++|++..... ...+..++..||++++.+.||+++
T Consensus 141 ~Y~asKaal~~lt~~la~El~~~~~gI~vn~v~PG~v~T~~~~~~~----------~~~~~~~~~~pe~va~~~~~l~s~ 210 (236)
T d1dhra_ 141 GYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRKSM----------PEADFSSWTPLEFLVETFHDWITG 210 (236)
T ss_dssp HHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHHHHHS----------TTSCGGGSEEHHHHHHHHHHHHTT
T ss_pred ccHHHHHHHHHHHHHHHHHhccCCCcEEEEEEEeccCcCCcchhhC----------ccchhhcCCCHHHHHHHHHHHhCC
Confidence 9999999999999999999972 47999999999999987543222 223456788899999999999998
Q ss_pred CC
Q 025672 247 AG 248 (249)
Q Consensus 247 ~a 248 (249)
++
T Consensus 211 ~~ 212 (236)
T d1dhra_ 211 NK 212 (236)
T ss_dssp TT
T ss_pred Cc
Confidence 75
|
| >d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Trypanosoma cruzi [TaxId: 5693]
Probab=100.00 E-value=1.5e-39 Score=264.53 Aligned_cols=229 Identities=22% Similarity=0.285 Sum_probs=184.6
Q ss_pred cEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcch-HHHHHHHHHhc-CCCeeEEEccCCC----HHHHHHHHHHHHHH
Q 025672 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTV-LRSAVAALHSL-GIPAIGLEGDVRK----REDAVRVVESTINH 86 (249)
Q Consensus 13 k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~-~~~~~~~~~~~-~~~~~~~~~Dl~~----~~~~~~~~~~~~~~ 86 (249)
.++|||||++|||+++|++|+++|++|++++|+.++ .+++.+++... +.+...+.+|+.+ ++.++++++++.++
T Consensus 2 ~vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (266)
T d1mxha_ 2 PAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRA 81 (266)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHHHHHHHH
Confidence 379999999999999999999999999999998665 56778888644 5567777666654 56788888889999
Q ss_pred hCCccEEEEcCCCCCCCCCC-----------CCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEec
Q 025672 87 FGKLDILVNAAAGNFLVPAE-----------DLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINIS 155 (249)
Q Consensus 87 ~~~id~vi~~ag~~~~~~~~-----------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~is 155 (249)
+|++|++|||||+....++. +...+.+...+..|+.+++...+...+.+...... ....+.+++++
T Consensus 82 ~g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 158 (266)
T d1mxha_ 82 FGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAW---RSRNLSVVNLC 158 (266)
T ss_dssp HSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC----------CCCEEEEEEC
T ss_pred hCCCCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhcccccccccc---ccccccchhhh
Confidence 99999999999987654432 22345567888899999998888887766443221 12247788999
Q ss_pred cccccccCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCC-CCHH
Q 025672 156 ATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKF-GEKW 234 (249)
Q Consensus 156 s~~~~~~~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 234 (249)
+..+..+.+++..|++||+|+++|+|++++|++ ++|||||+|+||+++|+... +++..+.+.+.+|++|. ++||
T Consensus 159 ~~~~~~~~~~~~~Y~asKaal~~lt~~lA~e~~-~~gIrVN~I~PG~i~t~~~~----~~~~~~~~~~~~pl~r~~~~pe 233 (266)
T d1mxha_ 159 DAMTDLPLPGFCVYTMAKHALGGLTRAAALELA-PRHIRVNAVAPGLSLLPPAM----PQETQEEYRRKVPLGQSEASAA 233 (266)
T ss_dssp CGGGGSCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEESSBSCCSSS----CHHHHHHHHTTCTTTSCCBCHH
T ss_pred hccccccCcchhhhhhhHHHHhhhHHHHHHHhC-ccCcEEEEeccCcEeccccC----CHHHHHHHHhcCCCCCCCCCHH
Confidence 999999999999999999999999999999999 99999999999999987432 35666778888998664 8999
Q ss_pred HHHHHHHHhccCCCC
Q 025672 235 DIAMAALYLASDAGQ 249 (249)
Q Consensus 235 dva~~v~~l~s~~a~ 249 (249)
|+|++++||+|++++
T Consensus 234 eva~~v~fL~s~~s~ 248 (266)
T d1mxha_ 234 QIADAIAFLVSKDAG 248 (266)
T ss_dssp HHHHHHHHHHSGGGT
T ss_pred HHHHHHHHHhCchhC
Confidence 999999999999863
|
| >d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=1.1e-39 Score=261.75 Aligned_cols=217 Identities=25% Similarity=0.337 Sum_probs=178.8
Q ss_pred CcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCcc
Q 025672 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD 91 (249)
Q Consensus 12 ~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 91 (249)
+|++|||||++|||+++|++|+++|++|++++|+++ +.+...+++|+++......+.....+... .+
T Consensus 1 DK~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~------------~~~~~~~~~d~~~~~~~~~~~~~~~~~~~-~~ 67 (241)
T d1uaya_ 1 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE------------GEDLIYVEGDVTREEDVRRAVARAQEEAP-LF 67 (241)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC------------SSSSEEEECCTTCHHHHHHHHHHHHHHSC-EE
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcc------------cccceEeeccccchhhhHHHHHhhhcccc-cc
Confidence 599999999999999999999999999999999875 24577889999999999999988776654 45
Q ss_pred EEEEcCCCCC----CCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch
Q 025672 92 ILVNAAAGNF----LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 167 (249)
Q Consensus 92 ~vi~~ag~~~----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~ 167 (249)
.++.+++... .......+.+.|++.+++|+.+++.+++.+.+.+.+... ......|+||++||..+..+.++..
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~--~~~~~~G~Ii~isS~~~~~~~~~~~ 145 (241)
T d1uaya_ 68 AVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPP--DAEGQRGVIVNTASVAAFEGQIGQA 145 (241)
T ss_dssp EEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCC--CTTSCSEEEEEECCTHHHHCCTTCH
T ss_pred chhhhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhh--hcccCceeeeeecchhhccCCCCch
Confidence 5556655432 234456778899999999999999999999998754321 1112359999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcc-cCCCCHHHHHHHHHHhccC
Q 025672 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAA-YKFGEKWDIAMAALYLASD 246 (249)
Q Consensus 168 ~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~v~~l~s~ 246 (249)
.|+++|+|+.+|+|+|+.||+ ++|||||+|+||+|+|++.... ..+. .+......|+ +|+++|||||++++||+|+
T Consensus 146 ~Y~asKaal~~lt~~lA~ela-~~gIrVN~V~PG~i~T~~~~~~-~~~~-~~~~~~~~~~~~R~g~pedvA~~v~fL~s~ 222 (241)
T d1uaya_ 146 AYAASKGGVVALTLPAARELA-GWGIRVVTVAPGLFDTPLLQGL-PEKA-KASLAAQVPFPPRLGRPEEYAALVLHILEN 222 (241)
T ss_dssp HHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSCSSHHHHTS-CHHH-HHHHHTTCCSSCSCCCHHHHHHHHHHHHHC
T ss_pred hhHHHHHHHHHHHHHHHHHHh-hcCCceeeecCCcccccccchh-hhhH-HHHHHhcCCCCCCCcCHHHHHHHHHHHHhC
Confidence 999999999999999999999 9999999999999998765443 3333 3344445554 8999999999999999984
|
| >d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]
Probab=100.00 E-value=3.3e-39 Score=262.90 Aligned_cols=227 Identities=24% Similarity=0.179 Sum_probs=185.9
Q ss_pred CCCCCcEEEEecC--CCchhHHHHHHHHHcCCeEEEEeCCcchHHH-HHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHH
Q 025672 8 DILKGKVALLTGG--GSGIGFEISLQLGKHGAAIAIMGRRKTVLRS-AVAALHSLGIPAIGLEGDVRKREDAVRVVESTI 84 (249)
Q Consensus 8 ~~l~~k~~lItGa--~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~-~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 84 (249)
..|+||++||||| ++|||+++|++|+++|++|++++|+.+++.+ +.+ ..+.+...++||++++++++.+++.+.
T Consensus 2 ~~l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~~~~~---~~~~~~~~~~~dv~~~~~~~~~~~~v~ 78 (268)
T d2h7ma1 2 GLLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITD---RLPAKAPLLELDVQNEEHLASLAGRVT 78 (268)
T ss_dssp CTTTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHT---TSSSCCCEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHH---HcCCceeeEeeecccccccccccchhh
Confidence 4689999999994 5799999999999999999999998876532 222 346678899999999999999999998
Q ss_pred HHh---CCccEEEEcCCCCCC-----CCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecc
Q 025672 85 NHF---GKLDILVNAAAGNFL-----VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISA 156 (249)
Q Consensus 85 ~~~---~~id~vi~~ag~~~~-----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss 156 (249)
+.+ +.+|++|||+|+... .++.+.+.++|...+.+|+...+...+.+.+.+.. +.+++++|
T Consensus 79 ~~~~~~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~i~~~s 147 (268)
T d2h7ma1 79 EAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNP-----------GGSIVGMD 147 (268)
T ss_dssp HHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE-----------EEEEEEEE
T ss_pred hccccCCCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhccc-----------cccccccc
Confidence 765 679999999997642 35567888999999999999999988888766433 44666677
Q ss_pred ccccccCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCC----CC------hHHHHHhhhhhhc
Q 025672 157 TLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK----LA------PEEIRSKATDYMA 226 (249)
Q Consensus 157 ~~~~~~~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~----~~------~~~~~~~~~~~~~ 226 (249)
.....+.+....|+++|+|+.+|+|++++||+ ++|||||+|+||+|+|++.... .. .+.+.+......|
T Consensus 148 ~~~~~~~p~~~~y~~sK~a~~~ltr~lA~e~~-~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 226 (268)
T d2h7ma1 148 FDPSRAMPAYNWMTVAKSALESVNRFVAREAG-KYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAP 226 (268)
T ss_dssp CCCSSCCTTTHHHHHHHHHHHHHHHHHHHHHH-TTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCT
T ss_pred ccccccCcccchhhccccchhhccccchhhhh-ccCCcceEEecCCCCChhhhhhccchhhhhhccchHHHHHHHHhcCC
Confidence 77777888899999999999999999999999 9999999999999998754211 11 1233445566678
Q ss_pred ccC-CCCHHHHHHHHHHhccCCCC
Q 025672 227 AYK-FGEKWDIAMAALYLASDAGQ 249 (249)
Q Consensus 227 ~~~-~~~~~dva~~v~~l~s~~a~ 249 (249)
++| +++|+|+|+++.||+||+++
T Consensus 227 l~rr~~~p~dva~~v~fL~Sd~a~ 250 (268)
T d2h7ma1 227 IGWNMKDATPVAKTVCALLSDWLP 250 (268)
T ss_dssp TCCCTTCCHHHHHHHHHHHSSSCT
T ss_pred CCCCCCCHHHHHHHHHHHhCchhc
Confidence 766 89999999999999999874
|
| >d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=100.00 E-value=6.8e-38 Score=250.41 Aligned_cols=206 Identities=18% Similarity=0.093 Sum_probs=170.9
Q ss_pred CcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHH--hCC
Q 025672 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH--FGK 89 (249)
Q Consensus 12 ~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~--~~~ 89 (249)
.++||||||++|||+++|++|+++|++|++++|++++. ......+.+|+.+.+..+...+.+.+. +++
T Consensus 2 ~gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 71 (235)
T d1ooea_ 2 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQ----------ADSNILVDGNKNWTEQEQSILEQTASSLQGSQ 71 (235)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTT----------SSEEEECCTTSCHHHHHHHHHHHHHHHHTTCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhc----------ccccceeccccCchhHHHHHHHHHHHHhcCCC
Confidence 35579999999999999999999999999999987631 224556778999998888888777764 589
Q ss_pred ccEEEEcCCCCCC-CCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchh
Q 025672 90 LDILVNAAAGNFL-VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH 168 (249)
Q Consensus 90 id~vi~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~ 168 (249)
||+||||||.... .+..+.+.+.|+.++++|+.++++++++++|+|++. |+||++||..+..+.++...
T Consensus 72 iD~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~----------g~Iv~isS~~~~~~~~~~~~ 141 (235)
T d1ooea_ 72 VDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPG----------GLLQLTGAAAAMGPTPSMIG 141 (235)
T ss_dssp EEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE----------EEEEEECCGGGGSCCTTBHH
T ss_pred eeEEEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccc----------eEEEEeccHHhcCCcccccc
Confidence 9999999997654 445555568899999999999999999999999653 88999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHhcC-CCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHH-hccC
Q 025672 169 VSAAKAAVDSITRSLALEWGT-DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALY-LASD 246 (249)
Q Consensus 169 y~~sK~a~~~l~~~la~e~~~-~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~-l~s~ 246 (249)
|++||+|+.+|+++|+.|++. +.||+||+|+||+++|++.... ....+..++.+|+|+++.+++ |.++
T Consensus 142 Y~asKaal~~l~~~la~e~~~~~~~i~v~~i~Pg~~~T~~~~~~----------~~~~~~~~~~~~~~va~~~~~~l~~~ 211 (235)
T d1ooea_ 142 YGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRKW----------MPNADHSSWTPLSFISEHLLKWTTET 211 (235)
T ss_dssp HHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHHHH----------STTCCGGGCBCHHHHHHHHHHHHHCG
T ss_pred hHHHHHHHHHHHHHHHHHhccCCCceEEEEEecCcCcCcchhhh----------CcCCccccCCCHHHHHHHHHHHhcCc
Confidence 999999999999999999962 4699999999999998654322 222345678899999999874 5454
Q ss_pred C
Q 025672 247 A 247 (249)
Q Consensus 247 ~ 247 (249)
.
T Consensus 212 ~ 212 (235)
T d1ooea_ 212 S 212 (235)
T ss_dssp G
T ss_pred c
Confidence 4
|
| >d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha-hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=100.00 E-value=2.2e-36 Score=244.59 Aligned_cols=204 Identities=20% Similarity=0.244 Sum_probs=152.2
Q ss_pred cEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh-CCcc
Q 025672 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF-GKLD 91 (249)
Q Consensus 13 k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~~id 91 (249)
|++|||||++|||+++|++|+++|++|++++|++++ ..+|+++.+..+....++.... +.+|
T Consensus 2 kVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~~-----------------~~~d~~~~~~~~~~~~~~~~~~~~~id 64 (257)
T d1fjha_ 2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAE-----------------VIADLSTAEGRKQAIADVLAKCSKGMD 64 (257)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSS-----------------EECCTTSHHHHHHHHHHHHTTCTTCCS
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChHH-----------------HHHHhcCHHHHHHHHHHHHHHhCCCCc
Confidence 799999999999999999999999999999998652 3469999999988877666544 6899
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccc--------------
Q 025672 92 ILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISAT-------------- 157 (249)
Q Consensus 92 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~-------------- 157 (249)
++|+|||+.. ..+.+.....+|..+...+.+.+.+.+.+... ..+.++++.
T Consensus 65 ~lv~~Ag~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~ 129 (257)
T d1fjha_ 65 GLVLCAGLGP-------QTKVLGNVVSVNYFGATELMDAFLPALKKGHQ--------PAAVVISSVASAHLAFDKNPLAL 129 (257)
T ss_dssp EEEECCCCCT-------TCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSS--------CEEEEECCGGGGSSCGGGCTTHH
T ss_pred EEEEcCCCCC-------cHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcc--------Ccceeeeeccccchhhhhhhhhh
Confidence 9999999643 22446788899999999999999998877553 334444332
Q ss_pred -------------ccccc-CccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhh-
Q 025672 158 -------------LHYTA-TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKAT- 222 (249)
Q Consensus 158 -------------~~~~~-~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~- 222 (249)
.+..+ .++..+|++||+|+.+|+|++|.||+ ++|||||+|+||+|+|++......+++..+.+.
T Consensus 130 ~~~~g~~~~i~s~~~~~~~~~~~~~Y~asKaal~~ltr~lA~el~-~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~ 208 (257)
T d1fjha_ 130 ALEAGEEAKARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWG-EAGVRLNTIAPGATETPLLQAGLQDPRYGESIAK 208 (257)
T ss_dssp HHHHTCHHHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHH-HTTCEEEEEEECC---------------------
T ss_pred hccCCcEEEEeeehhccCCCcchHHHHHHhhhhhccccccccccc-cccccccccccCCcCChhHHhhcCCHHHHHHHHh
Confidence 22222 23456799999999999999999999 999999999999999987766555555555443
Q ss_pred hhhcccCCCCHHHHHHHHHHhccCCCC
Q 025672 223 DYMAAYKFGEKWDIAMAALYLASDAGQ 249 (249)
Q Consensus 223 ~~~~~~~~~~~~dva~~v~~l~s~~a~ 249 (249)
...|++|+++|||||+++.||+||+++
T Consensus 209 ~~~PlgR~g~p~eva~~v~fL~S~~s~ 235 (257)
T d1fjha_ 209 FVPPMGRRAEPSEMASVIAFLMSPAAS 235 (257)
T ss_dssp CCCSTTSCCCTHHHHHHHHHHTSGGGT
T ss_pred cCCCCCCCcCHHHHHHHHHHHhCchhC
Confidence 346999999999999999999999874
|
| >d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Erythromycin synthase, eryAI, 1st ketoreductase module species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=100.00 E-value=2.9e-34 Score=232.47 Aligned_cols=212 Identities=15% Similarity=0.073 Sum_probs=170.0
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCC-eEEEEeCCc---chHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHH
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRK---TVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~-~v~l~~r~~---~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 86 (249)
.++++|||||++|||+++|++|+++|+ +|++++|+. +..+++.+++...+.++.++.||++|+++++++++++.+.
T Consensus 8 p~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~i~~~ 87 (259)
T d2fr1a1 8 PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGDD 87 (259)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTT
T ss_pred CcCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHHHHHHhhcccccc
Confidence 368999999999999999999999999 689999874 4466777888888889999999999999999999987654
Q ss_pred hCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccc
Q 025672 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ 166 (249)
Q Consensus 87 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~ 166 (249)
+++|+||||+|.....++.+.+.++|+..+++|+.+++++.+++. ... .++||++||..+..+.+++
T Consensus 88 -~~i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~----~~~--------~~~iv~~SS~a~~~g~~~~ 154 (259)
T d2fr1a1 88 -VPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTR----ELD--------LTAFVLFSSFASAFGAPGL 154 (259)
T ss_dssp -SCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHT----TSC--------CSEEEEEEEHHHHTCCTTC
T ss_pred -ccccccccccccccccccccccHHHHHHHhhhhccchhHHHHHhh----ccC--------CceEeeecchhhccCCccc
Confidence 689999999999988999999999999999999999999877543 222 3889999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhccC
Q 025672 167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246 (249)
Q Consensus 167 ~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~ 246 (249)
+.|+++|+++++|++.++ ..||++++|+||.+.++.+.... ..+.+... .....+|+++++++..++..
T Consensus 155 ~~YaAaka~l~~la~~~~-----~~Gi~v~~I~pg~~~~~g~~~~~----~~~~~~~~--G~~~~~~~~~~~~l~~~l~~ 223 (259)
T d2fr1a1 155 GGYAPGNAYLDGLAQQRR-----SDGLPATAVAWGTWAGSGMAEGP----VADRFRRH--GVIEMPPETACRALQNALDR 223 (259)
T ss_dssp TTTHHHHHHHHHHHHHHH-----HTTCCCEEEEECCBC----------------CTTT--TEECBCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhHHHHHHHHH-----hCCCCEEECCCCcccCCccccch----HHHHHHhc--CCCCCCHHHHHHHHHHHHhC
Confidence 999999999988876654 45899999999999765443221 11111111 11345899999998887753
|
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Probab=99.88 E-value=1.3e-21 Score=164.42 Aligned_cols=213 Identities=15% Similarity=0.079 Sum_probs=148.3
Q ss_pred cEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcc-----hHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT-----VLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 13 k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~-----~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
|+||||||+|.||++++++|+++|++|+.++|... +++.+..+......++.++++|++|.+++++++...
T Consensus 2 K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---- 77 (357)
T d1db3a_ 2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREV---- 77 (357)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHH----
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhcc----
Confidence 89999999999999999999999999999998543 333333333334568999999999999999999876
Q ss_pred CCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc------
Q 025672 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT------ 161 (249)
Q Consensus 88 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~------ 161 (249)
.+|+|+|+|+..... .+.++....+++|+.|+.++++++...-.+. ..++|++||...+.
T Consensus 78 -~~d~v~h~aa~~~~~----~~~~~~~~~~~~Nv~gt~nllea~~~~~~~~---------~~r~i~~SS~~vYG~~~~~~ 143 (357)
T d1db3a_ 78 -QPDEVYNLGAMSHVA----VSFESPEYTADVDAMGTLRLLEAIRFLGLEK---------KTRFYQASTSELYGLVQEIP 143 (357)
T ss_dssp -CCSEEEECCCCCTTT----TTTSCHHHHHHHHTHHHHHHHHHHHHTTCTT---------TCEEEEEEEGGGGTTCCSSS
T ss_pred -CCCEEEEeecccccc----hhhhCHHHHHHHHHHHHHHHHHHHHHhCCCC---------CcEEEEEEchhhhCCCCCCC
Confidence 689999999976533 2334556788999999999999886442221 25699999865331
Q ss_pred -----cCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhh----hh---c---
Q 025672 162 -----ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATD----YM---A--- 226 (249)
Q Consensus 162 -----~~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~----~~---~--- 226 (249)
+..+...|+.+|.+.+.+++.+++.+ |+.+..+.|+.+..|..........+...+.. .. .
T Consensus 144 ~~E~~~~~P~~~Y~~sK~~~E~~~~~~~~~~----~l~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~ 219 (357)
T d1db3a_ 144 QKETTPFYPRSPYAVAKLYAYWITVNYRESY----GMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGN 219 (357)
T ss_dssp BCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH----CCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESC
T ss_pred cCCCCCCCCCChHHHHHHHHHHHHHHHHHHh----CCCEEEEEeccccCCCCCcCCCchHHHHHHHHHHhCCCceEEECC
Confidence 11245679999999999999988765 58999999999987643322222222222211 11 1
Q ss_pred ---ccCCCCHHHHHHHHHHhccCC
Q 025672 227 ---AYKFGEKWDIAMAALYLASDA 247 (249)
Q Consensus 227 ---~~~~~~~~dva~~v~~l~s~~ 247 (249)
.+-+...+|+++++..++...
T Consensus 220 ~~~~r~~~~v~D~~~a~~~~~~~~ 243 (357)
T d1db3a_ 220 MDSLRDWGHAKDYVKMQWMMLQQE 243 (357)
T ss_dssp TTCEECCEEHHHHHHHHHHTTSSS
T ss_pred CCeeecceeechHHHHHHHHHhCC
Confidence 112567899999999888643
|
| >d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylene-tetrahydromethanopterin dehydrogenase species: Methylobacterium extorquens [TaxId: 408]
Probab=99.84 E-value=2.7e-22 Score=154.25 Aligned_cols=154 Identities=14% Similarity=0.142 Sum_probs=114.9
Q ss_pred CCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHH
Q 025672 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (249)
Q Consensus 7 ~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 86 (249)
..+|+||+++||||++|||+++++.|+++|++|++++|+.++++++.+++... .++.+..+|++|.+++++++
T Consensus 18 ~~~l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~------ 90 (191)
T d1luaa1 18 GGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKR-FKVNVTAAETADDASRAEAV------ 90 (191)
T ss_dssp TSCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH-HTCCCEEEECCSHHHHHHHT------
T ss_pred CCCCCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhc-cchhhhhhhcccHHHHHHHh------
Confidence 45799999999999999999999999999999999999999999999888653 34667889999999887764
Q ss_pred hCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc-Ccc
Q 025672 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA-TWY 165 (249)
Q Consensus 87 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~-~~~ 165 (249)
+++|+||||+|.. +...+.++|+..+++|+.+.++.+..+.+.+.... .....+++...+.+ ..+
T Consensus 91 -~~iDilin~Ag~g----~~~~~~e~~~~~~~~nv~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~g~~~~g 156 (191)
T d1luaa1 91 -KGAHFVFTAGAIG----LELLPQAAWQNESSIEIVADYNAQPPLGIGGIDAT---------DKGKEYGGKRAFGALGIG 156 (191)
T ss_dssp -TTCSEEEECCCTT----CCCBCHHHHHTCTTCCEEEECCCSSSCSBTTCCTT---------CEEEEETTEEEECHHHHH
T ss_pred -cCcCeeeecCccc----cccCCHHHHHhhhcceeehhHhhHHHHHHHhhhhc---------cCcEEecceEEEeccCcC
Confidence 5799999999963 34568899999999999887766544322221110 12223332222221 123
Q ss_pred chhhHHHHHHHHHHHH
Q 025672 166 QIHVSAAKAAVDSITR 181 (249)
Q Consensus 166 ~~~y~~sK~a~~~l~~ 181 (249)
...|+++|+++..+++
T Consensus 157 ~~~y~~sk~a~~~l~~ 172 (191)
T d1luaa1 157 GLKLKLHRACIAKLFE 172 (191)
T ss_dssp HHHHHHHHHHHHHHTS
T ss_pred cHHHHHHHHHHHHHHh
Confidence 4569999999887764
|
| >d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sulfolipid biosynthesis protein SQD1 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.80 E-value=3.3e-18 Score=145.08 Aligned_cols=174 Identities=13% Similarity=0.147 Sum_probs=128.3
Q ss_pred CcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCC----------------cchHHHHHHHHH-hcCCCeeEEEccCCCHH
Q 025672 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR----------------KTVLRSAVAALH-SLGIPAIGLEGDVRKRE 74 (249)
Q Consensus 12 ~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~----------------~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~ 74 (249)
|++||||||+|.||.+++++|+++|++|+++|.- ............ -.+.++.++++|++|.+
T Consensus 1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~ 80 (393)
T d1i24a_ 1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFE 80 (393)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhcCCCcEEEEccCCCHH
Confidence 6899999999999999999999999999998721 111111122221 22567999999999999
Q ss_pred HHHHHHHHHHHHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEe
Q 025672 75 DAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINI 154 (249)
Q Consensus 75 ~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~i 154 (249)
.++.+++.. ++|+|||.|+..... ....+.+.....+++|+.|+.++++++...-.+ -++++.
T Consensus 81 ~l~~~~~~~-----~~d~ViHlAa~~~~~-~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~-----------~~~i~~ 143 (393)
T d1i24a_ 81 FLAESFKSF-----EPDSVVHFGEQRSAP-YSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEE-----------CHLVKL 143 (393)
T ss_dssp HHHHHHHHH-----CCSEEEECCSCCCHH-HHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTT-----------CEEEEE
T ss_pred HHHHHHHhh-----cchheeccccccccc-cccccccccccccccccccccHHHHHHHHhccc-----------cceeec
Confidence 999999875 699999999864321 122455667788999999999999988754322 346666
Q ss_pred cccccccc------------------------CccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccc
Q 025672 155 SATLHYTA------------------------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDT 206 (249)
Q Consensus 155 ss~~~~~~------------------------~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~ 206 (249)
||...+.. ..+...|+.+|.+.+.+++.+.+++ ++++..+.|+.+..+
T Consensus 144 ss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~----~l~~~~lR~~~v~G~ 215 (393)
T d1i24a_ 144 GTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW----GIRATDLNQGVVYGV 215 (393)
T ss_dssp CCGGGGCCCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHH----CCEEEEEEECEEECS
T ss_pred cccccccccccccccccccccccccccccccccccccHHHHHhhhhccccccccccc----ceeeeecccccccCC
Confidence 66544321 1233469999999999999888765 599999999888754
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.80 E-value=1.7e-18 Score=144.19 Aligned_cols=212 Identities=15% Similarity=0.077 Sum_probs=145.7
Q ss_pred cEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcc-----hHHHHHHHHH-hcCCCeeEEEccCCCHHHHHHHHHHHHHH
Q 025672 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT-----VLRSAVAALH-SLGIPAIGLEGDVRKREDAVRVVESTINH 86 (249)
Q Consensus 13 k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~-----~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 86 (249)
|++|||||+|.||++++++|+++|++|+.++|+.. +++.+..... ....++.++.+|++|.+++..++...
T Consensus 2 KI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--- 78 (347)
T d1t2aa_ 2 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEV--- 78 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHH---
T ss_pred CEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHhhc---
Confidence 45599999999999999999999999999998643 2222211111 11346899999999999999999875
Q ss_pred hCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc----
Q 025672 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA---- 162 (249)
Q Consensus 87 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~---- 162 (249)
.+++++|.++..... ...+.....+++|+.|+.++++++....... ..++|++||..-+..
T Consensus 79 --~~~~v~~~~a~~~~~----~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~---------~~~~i~~SS~~vyg~~~~~ 143 (347)
T d1t2aa_ 79 --KPTEIYNLGAQSHVK----ISFDLAEYTADVDGVGTLRLLDAVKTCGLIN---------SVKFYQASTSELYGKVQEI 143 (347)
T ss_dssp --CCSEEEECCSCCCHH----HHHHSHHHHHHHHTHHHHHHHHHHHHTTCTT---------TCEEEEEEEGGGTCSCSSS
T ss_pred --ccceeeeeeeccccc----hhhccchhhhhhHHHHHHHHHHHHHHcCCCC---------CcEEEEecchheecCCCCC
Confidence 688999988854321 2334456678999999999998886543221 146999998654321
Q ss_pred -------CccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhh----hhhc-----
Q 025672 163 -------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKAT----DYMA----- 226 (249)
Q Consensus 163 -------~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~----~~~~----- 226 (249)
..+...|+.||.+.+.+++.+.+.+ ++.+..+.|+.+..|..............+. ...+
T Consensus 144 ~~~E~~~~~P~~~Yg~sK~~aE~~~~~~~~~~----~~~~~ilr~~~vyGp~~~~~~~~~~~~~~i~~~~~~~~~~~~~g 219 (347)
T d1t2aa_ 144 PQKETTPFYPRSPYGAAKLYAYWIVVNFREAY----NLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLG 219 (347)
T ss_dssp SBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH----CCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEES
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh----CCCEEEEEecceeCCCCCCCccccccceeeehhhcCCcceeecC
Confidence 1235679999999999999888765 5888899998888654333322222222111 1111
Q ss_pred ----ccCCCCHHHHHHHHHHhccC
Q 025672 227 ----AYKFGEKWDIAMAALYLASD 246 (249)
Q Consensus 227 ----~~~~~~~~dva~~v~~l~s~ 246 (249)
.+.+...+|+++++..++..
T Consensus 220 ~g~~~r~~i~v~D~~~a~~~~~~~ 243 (347)
T d1t2aa_ 220 NLDAKRDWGHAKDYVEAMWLMLQN 243 (347)
T ss_dssp CTTCEECCEEHHHHHHHHHHHHHS
T ss_pred CCcceeeeeEecHHHHHHHHHhhc
Confidence 12356789999999988754
|
| >d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Aldehyde reductase II species: Sporobolomyces salmonicolor [TaxId: 5005]
Probab=99.79 E-value=1e-18 Score=145.62 Aligned_cols=208 Identities=15% Similarity=0.047 Sum_probs=144.8
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhc--CCCeeEEEccCCCHHHHHHHHHHHHHHhC
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVESTINHFG 88 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 88 (249)
+||+||||||+|.||.+++++|+++|++|+.+.|+..+...+....... .....++..|++|.+++..++.
T Consensus 10 ~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------- 82 (342)
T d1y1pa1 10 EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIK------- 82 (342)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTT-------
T ss_pred CcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhhhcc-------
Confidence 4899999999999999999999999999999999887766655443322 2334568899999998777654
Q ss_pred CccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc------
Q 025672 89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA------ 162 (249)
Q Consensus 89 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~------ 162 (249)
.+|.++|+++.... ..+ ....++.|+.|+.++++.+.... . -.++|++||......
T Consensus 83 ~~~~v~~~a~~~~~----~~~---~~~~~~~nv~gt~~ll~~~~~~~---~--------v~~~i~~SS~~~~~~~~~~~~ 144 (342)
T d1y1pa1 83 GAAGVAHIASVVSF----SNK---YDEVVTPAIGGTLNALRAAAATP---S--------VKRFVLTSSTVSALIPKPNVE 144 (342)
T ss_dssp TCSEEEECCCCCSC----CSC---HHHHHHHHHHHHHHHHHHHHTCT---T--------CCEEEEECCGGGTCCCCTTCC
T ss_pred cchhhhhhcccccc----ccc---ccccccchhhhHHHHHHhhhccc---c--------cccccccccceeeccCCCCCC
Confidence 58999999986431 122 34567889999999988876431 1 156999999653211
Q ss_pred -------------------------CccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCC---h
Q 025672 163 -------------------------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA---P 214 (249)
Q Consensus 163 -------------------------~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~---~ 214 (249)
..+...|+.+|.+.+.+++.++++.. .++++..|+|+.+..+....... .
T Consensus 145 ~~~~~e~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~--~~~~~~~i~p~~v~Gp~~~~~~~~~~~ 222 (342)
T d1y1pa1 145 GIYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENK--PHFTLNAVLPNYTIGTIFDPETQSGST 222 (342)
T ss_dssp CCEECTTCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHC--CSSEEEEEEESEEECCCSCTTTCCCHH
T ss_pred CccccccccccccccccccccccCCCCCcCcccchhHhHHHHHHHhhhhcc--cccccceecccceeCCCCCccccccch
Confidence 12345699999999999999988763 47888999999887553322211 1
Q ss_pred HHHHHhhhhh--------hcccCCCCHHHHHHHHHHhcc
Q 025672 215 EEIRSKATDY--------MAAYKFGEKWDIAMAALYLAS 245 (249)
Q Consensus 215 ~~~~~~~~~~--------~~~~~~~~~~dva~~v~~l~s 245 (249)
..+...+... .+...+..++|+|++++.++.
T Consensus 223 ~~~~~~l~~g~~~~~~~~~~~~~~v~v~Dva~~~i~~l~ 261 (342)
T d1y1pa1 223 SGWMMSLFNGEVSPALALMPPQYYVSAVDIGLLHLGCLV 261 (342)
T ss_dssp HHHHHHHHTTCCCHHHHTCCSEEEEEHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCcCcccCCccceeeeeHHHHHHHHHHhhc
Confidence 2222222111 111225678999999776653
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=99.78 E-value=2.2e-18 Score=144.76 Aligned_cols=215 Identities=19% Similarity=0.118 Sum_probs=148.6
Q ss_pred EEEEecCCCchhHHHHHHHHHcCCeEE-EEeCCcch--HHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCc
Q 025672 14 VALLTGGGSGIGFEISLQLGKHGAAIA-IMGRRKTV--LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (249)
Q Consensus 14 ~~lItGa~~giG~~~a~~l~~~G~~v~-l~~r~~~~--~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 90 (249)
+||||||+|.||++++++|++.|++++ ++++.... .+.+. .+ ....++.++++|++|.++++.+++.. .+
T Consensus 2 kILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~~~~~~-~~-~~~~~~~~~~~Dl~d~~~l~~~~~~~-----~~ 74 (361)
T d1kewa_ 2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLS-DI-SESNRYNFEHADICDSAEITRIFEQY-----QP 74 (361)
T ss_dssp EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGT-TT-TTCTTEEEEECCTTCHHHHHHHHHHH-----CC
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCccccHHHHH-hh-hhcCCcEEEEccCCCHHHHHHHHHhC-----CC
Confidence 589999999999999999999999754 45542211 11111 11 11357899999999999999998764 69
Q ss_pred cEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc--------
Q 025672 91 DILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA-------- 162 (249)
Q Consensus 91 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~-------- 162 (249)
|+|||+|+.... ..+.++....+++|+.|..++++++........... ....++|++||...+..
T Consensus 75 d~VihlAa~~~~----~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~---~~~~~~i~~SS~~vyg~~~~~~~~~ 147 (361)
T d1kewa_ 75 DAVMHLAAESHV----DRSITGPAAFIETNIVGTYALLEVARKYWSALGEDK---KNNFRFHHISTDEVYGDLPHPDEVE 147 (361)
T ss_dssp SEEEECCSCCCH----HHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHH---HHHCEEEEEEEGGGGCCCCCGGGSC
T ss_pred CEEEECccccch----hhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcc---cCceEEEEeccceeeCCCccCCccc
Confidence 999999985431 112334467899999999999999987654310000 00146999999764421
Q ss_pred -------------CccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcc--
Q 025672 163 -------------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAA-- 227 (249)
Q Consensus 163 -------------~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~-- 227 (249)
..+...|+.+|.+.+.+++.+...+ |+.+..+.|+.+..|..........+.......-+.
T Consensus 148 ~~~~~~~~~e~~~~~p~s~Yg~sK~~~E~~~~~~~~~~----~i~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~g~~~~v 223 (361)
T d1kewa_ 148 NSVTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTY----GLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPI 223 (361)
T ss_dssp TTSCCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH----CCCEEEEEECEEESTTCCTTSHHHHHHHHHHHTCCEEE
T ss_pred cccCCCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHh----CCCEEEEecCceECcCCCcCcHHHHHHHHHHcCCCcEE
Confidence 1234569999999999999998764 599999999999976554332223444433333222
Q ss_pred -------cCCCCHHHHHHHHHHhccC
Q 025672 228 -------YKFGEKWDIAMAALYLASD 246 (249)
Q Consensus 228 -------~~~~~~~dva~~v~~l~s~ 246 (249)
+.+...+|+|+++..++..
T Consensus 224 ~g~g~~~r~~i~v~D~a~ai~~~~~~ 249 (361)
T d1kewa_ 224 YGKGDQIRDWLYVEDHARALHMVVTE 249 (361)
T ss_dssp ETTSCCEEEEEEHHHHHHHHHHHHHH
T ss_pred eCCCCeEEeCEEHHHHHHHHHHHHhc
Confidence 1245789999999988753
|
| >d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Escherichia coli [TaxId: 562]
Probab=99.77 E-value=4e-18 Score=141.81 Aligned_cols=168 Identities=17% Similarity=0.105 Sum_probs=128.0
Q ss_pred EEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcch---HHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCc
Q 025672 14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTV---LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (249)
Q Consensus 14 ~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~---~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 90 (249)
.+|||||+|.||++++++|+++|++|++++|-... .....+... ..++.++++|++|.+.+.++++.. ++
T Consensus 2 KiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~l~~~~~~~-----~~ 74 (338)
T d1udca_ 2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLG--GKHPTFVEGDIRNEALMTEILHDH-----AI 74 (338)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHH--TSCCEEEECCTTCHHHHHHHHHHT-----TC
T ss_pred EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhhc--CCCCEEEEeecCCHHHHHHHHhcc-----CC
Confidence 48999999999999999999999999999863222 112222222 357999999999999999998853 69
Q ss_pred cEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC-------
Q 025672 91 DILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT------- 163 (249)
Q Consensus 91 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~------- 163 (249)
|+|||+|+..... .+.++....+++|+.|+.++++++...-. .++|++||...+...
T Consensus 75 d~ViHlAa~~~~~----~~~~~~~~~~~~Nv~gt~nlL~~~~~~~v------------~~~i~~Ss~~vy~~~~~~~~~e 138 (338)
T d1udca_ 75 DTVIHFAGLKAVG----ESVQKPLEYYDNNVNGTLRLISAMRAANV------------KNFIFSSSATVYGDQPKIPYVE 138 (338)
T ss_dssp SEEEECCSCCCHH----HHHHCHHHHHHHHHHHHHHHHHHHHHHTC------------CEEEEEEEGGGGCSCCSSSBCT
T ss_pred CEEEECCCccchh----hHHhCHHHHHHhHHHHHHHHHHHHHHhCC------------CEEEecCcceEEcccccccccc
Confidence 9999999853211 22344568899999999999998876521 458898887654321
Q ss_pred -----ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccccc
Q 025672 164 -----WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTA 207 (249)
Q Consensus 164 -----~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~ 207 (249)
.+...|+.+|.+.+.+.+....++ .++.+..+.|+.+..+.
T Consensus 139 ~~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~ilR~~~v~G~~ 184 (338)
T d1udca_ 139 SFPTGTPQSPYGKSKLMVEQILTDLQKAQ---PDWSIALLRYFNPVGAH 184 (338)
T ss_dssp TSCCCCCSSHHHHHHHHHHHHHHHHHHHS---TTCEEEEEEECEEECCC
T ss_pred ccccCCCcchHHHHHhhhhHHHHHHHhhc---cCCeEEEEeeccEEecc
Confidence 246679999999999999888774 37888889998888653
|
| >d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.77 E-value=6.7e-18 Score=139.13 Aligned_cols=209 Identities=14% Similarity=0.046 Sum_probs=143.8
Q ss_pred cEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHH-HHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCcc
Q 025672 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLR-SAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD 91 (249)
Q Consensus 13 k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 91 (249)
|+||||||+|.||++++++|+++|++|+.++|+..... ...+++ ....++.++++|++|.+.++.++... ..+
T Consensus 1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~l~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~~ 74 (321)
T d1rpna_ 1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLREL-GIEGDIQYEDGDMADACSVQRAVIKA-----QPQ 74 (321)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHT-TCGGGEEEEECCTTCHHHHHHHHHHH-----CCS
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcccHHHHHHh-cccCCcEEEEccccChHHhhhhhccc-----ccc
Confidence 78999999999999999999999999999998754311 112222 12346899999999999999988765 578
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc----------
Q 025672 92 ILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT---------- 161 (249)
Q Consensus 92 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~---------- 161 (249)
+++++++..... ...+.....+++|+.|+.+++.++...-.+ .++++.||.....
T Consensus 75 ~~~~~a~~~~~~----~~~~~~~~~~~~n~~g~~~~l~~~~~~~~~-----------~~~i~~Ss~~~~~~~~~~~~~E~ 139 (321)
T d1rpna_ 75 EVYNLAAQSFVG----ASWNQPVTTGVVDGLGVTHLLEAIRQFSPE-----------TRFYQASTSEMFGLIQAERQDEN 139 (321)
T ss_dssp EEEECCSCCCHH----HHTTSHHHHHHHHTHHHHHHHHHHHHHCTT-----------SEEEEEEEGGGGCSCSSSSBCTT
T ss_pred cccccccccccc----ccccchHHHHhhhhhchHHHHHHHHHhCCC-----------cccccccchhhcCcccCCCCCCC
Confidence 888888754321 112335678899999999998888654222 3466666654321
Q ss_pred -cCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChH----HHHHhhhhh-hc--------c
Q 025672 162 -ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPE----EIRSKATDY-MA--------A 227 (249)
Q Consensus 162 -~~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~----~~~~~~~~~-~~--------~ 227 (249)
+..+...|+.+|.+.+.+.+.+..++ ++++..+.|+.+..|......... .+.+..... .+ .
T Consensus 140 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~----~~~~~~lr~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~i~~g~g~~~ 215 (321)
T d1rpna_ 140 TPFYPRSPYGVAKLYGHWITVNYRESF----GLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAK 215 (321)
T ss_dssp SCCCCCSHHHHHHHHHHHHHHHHHHHH----CCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCE
T ss_pred CCccccChhHHHHHHHHHHHHHHHhhc----CCcEEEEEEecccCCCccccccHHHHHHHHHHHHhCCCCcEEECCCCeE
Confidence 11345789999999999999988765 488889999888765433222111 112211111 11 1
Q ss_pred cCCCCHHHHHHHHHHhccC
Q 025672 228 YKFGEKWDIAMAALYLASD 246 (249)
Q Consensus 228 ~~~~~~~dva~~v~~l~s~ 246 (249)
+.+...+|+++++..++..
T Consensus 216 r~~i~v~D~~~~~~~~~~~ 234 (321)
T d1rpna_ 216 RDWGFAGDYVEAMWLMLQQ 234 (321)
T ss_dssp EECEEHHHHHHHHHHHHHS
T ss_pred EccEEeHHHHHHHHHHHhc
Confidence 1256789999999998743
|
| >d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.77 E-value=2.3e-17 Score=136.82 Aligned_cols=216 Identities=14% Similarity=0.047 Sum_probs=147.9
Q ss_pred CcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcc-----hHHHHHHHHHh-cCCCeeEEEccCCCHHHHHHHHHHHHH
Q 025672 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT-----VLRSAVAALHS-LGIPAIGLEGDVRKREDAVRVVESTIN 85 (249)
Q Consensus 12 ~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~-----~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 85 (249)
.|++|||||+|.||++++++|+++|++|+.++|... +...+...... ....+.++.+|+++.++++..++..
T Consensus 1 ~k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~-- 78 (339)
T d1n7ha_ 1 RKIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVI-- 78 (339)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHH--
T ss_pred CCEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHhhh--
Confidence 489999999999999999999999999999998532 22222111111 1246789999999999999998864
Q ss_pred HhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc---
Q 025672 86 HFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA--- 162 (249)
Q Consensus 86 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~--- 162 (249)
.+|+|||+|+..... ...++....++.|+.+..+++.++.....+... ..++++.||......
T Consensus 79 ---~~D~Vih~Aa~~~~~----~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~-------~~~~~~~ss~~~~~~~~~ 144 (339)
T d1n7ha_ 79 ---KPDEVYNLAAQSHVA----VSFEIPDYTADVVATGALRLLEAVRSHTIDSGR-------TVKYYQAGSSEMFGSTPP 144 (339)
T ss_dssp ---CCSEEEECCSCCCHH----HHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCC-------CCEEEEEEEGGGGTTSCS
T ss_pred ---ccchhhhcccccccc----ccccCccccccccccccchhhhhhhhccccccc-------ceeeeecccceecccCCC
Confidence 799999999864321 123455778899999999999988766544321 134555555433221
Q ss_pred -------CccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHh----hhhhhc-----
Q 025672 163 -------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSK----ATDYMA----- 226 (249)
Q Consensus 163 -------~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~----~~~~~~----- 226 (249)
..+...|+.+|.+.+.+++...+.+ |+.+..+.|+.+..|..........+... .....+
T Consensus 145 ~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~----~~~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g 220 (339)
T d1n7ha_ 145 PQSETTPFHPRSPYAASKCAAHWYTVNYREAY----GLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLG 220 (339)
T ss_dssp SBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH----CCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEES
T ss_pred CCCCCCCCCCcchhhHHHHHHHHHHHHHHHHh----CCCEEEEEEccccCCCCCCCCCcchhhHHHHHHhcCCCCeEEeC
Confidence 2346689999999999998888764 59999999999987643333322222211 111111
Q ss_pred ----ccCCCCHHHHHHHHHHhccCC
Q 025672 227 ----AYKFGEKWDIAMAALYLASDA 247 (249)
Q Consensus 227 ----~~~~~~~~dva~~v~~l~s~~ 247 (249)
.+-+...+|+++++..++...
T Consensus 221 ~~~~~rd~~~v~D~a~~~~~~~~~~ 245 (339)
T d1n7ha_ 221 NLQASRDWGFAGDYVEAMWLMLQQE 245 (339)
T ss_dssp CTTCEEECEEHHHHHHHHHHHHTSS
T ss_pred CCCccccceeeehHHHHHHHHHhcC
Confidence 112567899999999887653
|
| >d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.76 E-value=1.1e-17 Score=139.63 Aligned_cols=170 Identities=16% Similarity=0.051 Sum_probs=126.4
Q ss_pred cEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcch-HHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCcc
Q 025672 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTV-LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD 91 (249)
Q Consensus 13 k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 91 (249)
|+||||||+|.||++++++|+++|++|+++++.... .+.....-.....++.++++|++|.++++.++... ++|
T Consensus 2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~-----~~d 76 (347)
T d1z45a2 2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEY-----KID 76 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHS-----CCC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhhcccCCeEEEeecCCHHHHHHHHhcc-----CCC
Confidence 789999999999999999999999999998763222 22222221122457889999999999999998753 699
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc---------
Q 025672 92 ILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA--------- 162 (249)
Q Consensus 92 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~--------- 162 (249)
+|||+|+..... ...+.......+|+.++.++++++...-. -++|++||...+..
T Consensus 77 ~VihlAa~~~~~----~~~~~~~~~~~~N~~~t~~ll~~~~~~~i------------~~~i~~SS~~vyg~~~~~~~~~~ 140 (347)
T d1z45a2 77 SVIHFAGLKAVG----ESTQIPLRYYHNNILGTVVLLELMQQYNV------------SKFVFSSSATVYGDATRFPNMIP 140 (347)
T ss_dssp EEEECCSCCCHH----HHHHSHHHHHHHHHHHHHHHHHHHHHHTC------------CEEEEEEEGGGGCCGGGSTTCCS
T ss_pred EEEEcccccccc----ccccCcccccccchhhhHHHHHHHHhccc------------ceEEeecceeeecCcccCCCCCc
Confidence 999999964311 12234467788999999999999864321 45999999665421
Q ss_pred ------CccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccc
Q 025672 163 ------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKD 205 (249)
Q Consensus 163 ------~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t 205 (249)
..+...|+.+|.+.+.+++.+.+.. ..++.+..+.|+.+..
T Consensus 141 ~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~~lR~~~v~g 187 (347)
T d1z45a2 141 IPEECPLGPTNPYGHTKYAIENILNDLYNSD--KKSWKFAILRYFNPIG 187 (347)
T ss_dssp BCTTSCCCCCSHHHHHHHHHHHHHHHHHHHS--TTSCEEEEEEECEEEC
T ss_pred cccccCCCCCChhHhHHHHHHHHHHHHHHhh--ccCCcEEEEeecceEe
Confidence 1234579999999999999888764 5678888888776653
|
| >d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-tyvelose-2-epimerase species: Salmonella typhi [TaxId: 90370]
Probab=99.75 E-value=1.1e-16 Score=132.28 Aligned_cols=153 Identities=18% Similarity=0.139 Sum_probs=112.1
Q ss_pred EEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcch-HHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCccE
Q 025672 14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTV-LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI 92 (249)
Q Consensus 14 ~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ 92 (249)
.||||||+|.||++++++|+++|++|+.+++-... .......+. ...++.++.+|++|.+++..+++.. ++|+
T Consensus 2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~-~~~~~~~i~~Di~~~~~l~~~~~~~-----~~d~ 75 (338)
T d1orra_ 2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLS-SLGNFEFVHGDIRNKNDVTRLITKY-----MPDS 75 (338)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHH-TTCCCEEEECCTTCHHHHHHHHHHH-----CCSE
T ss_pred EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHhh-ccCCcEEEEcccCCHHHHHHHHHhc-----CCce
Confidence 48999999999999999999999999998753222 222223332 2457899999999999999998866 6899
Q ss_pred EEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC---------
Q 025672 93 LVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT--------- 163 (249)
Q Consensus 93 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~--------- 163 (249)
|||+|+..... ...++....+++|+.|+.++++++...-. .+.++.||.....+.
T Consensus 76 Vih~aa~~~~~----~~~~~~~~~~~~Nv~gt~nll~~~~~~~~------------~~~i~~sS~~~~~~~~~~~~~~~~ 139 (338)
T d1orra_ 76 CFHLAGQVAMT----TSIDNPCMDFEINVGGTLNLLEAVRQYNS------------NCNIIYSSTNKVYGDLEQYKYNET 139 (338)
T ss_dssp EEECCCCCCHH----HHHHCHHHHHHHHHHHHHHHHHHHHHHCT------------TCEEEEEEEGGGGTTCTTSCEEEC
T ss_pred EEeeccccccc----ccccChHHHHHHHHHHHHHHHHhhhcccc------------cccccccccccccccccccccccc
Confidence 99999864321 12344578899999999999988765422 225555554332211
Q ss_pred -------------------ccchhhHHHHHHHHHHHHHHHHHhc
Q 025672 164 -------------------WYQIHVSAAKAAVDSITRSLALEWG 188 (249)
Q Consensus 164 -------------------~~~~~y~~sK~a~~~l~~~la~e~~ 188 (249)
.+...|+.+|...+.+.......+.
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~y~~~k~~~e~~~~~~~~~~~ 183 (338)
T d1orra_ 140 ETRYTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIFG 183 (338)
T ss_dssp SSCEEETTCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred cccccccccccCcccCCccccccccccccchhhhhhhhhhhccC
Confidence 2356799999999999988888764
|
| >d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) species: Escherichia coli [TaxId: 562]
Probab=99.73 E-value=4.7e-17 Score=133.67 Aligned_cols=189 Identities=14% Similarity=0.070 Sum_probs=135.3
Q ss_pred CcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCcc
Q 025672 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD 91 (249)
Q Consensus 12 ~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 91 (249)
.|.||||||+|.||++++++|+++|+.+++++++.+ +|+.|.+.++.+++.- .+|
T Consensus 2 kkkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~~--------------------~~~~~~~~~~~~~~~~-----~~d 56 (315)
T d1e6ua_ 2 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRDE--------------------LNLLDSRAVHDFFASE-----RID 56 (315)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTTT--------------------CCTTCHHHHHHHHHHH-----CCS
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCchh--------------------ccccCHHHHHHHHhhc-----CCC
Confidence 578999999999999999999999999887765432 5999999999887643 689
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC--------
Q 025672 92 ILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT-------- 163 (249)
Q Consensus 92 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~-------- 163 (249)
.++|+++...... .........+++|+.++.++++++... +. -++|++||...+.+.
T Consensus 57 ~v~~~a~~~~~~~---~~~~~~~~~~~~Nv~gt~~ll~~a~~~----~v--------~~~i~~SS~~vyg~~~~~~~~E~ 121 (315)
T d1e6ua_ 57 QVYLAAAKVGGIV---ANNTYPADFIYQNMMIESNIIHAAHQN----DV--------NKLLFLGSSCIYPKLAKQPMAES 121 (315)
T ss_dssp EEEECCCCCCCHH---HHHHCHHHHHHHHHHHHHHHHHHHHHT----TC--------CEEEEECCGGGSCTTCCSSBCGG
T ss_pred EEEEcchhccccc---cchhhHHHHHHHHHHHHHHHHHHHHHc----CC--------CEEEEECCceEcCCCCCCCccCC
Confidence 9999987543211 123445667889999999998888643 11 459999998754321
Q ss_pred --------ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCCh----HHHH-----Hhhhhh--
Q 025672 164 --------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP----EEIR-----SKATDY-- 224 (249)
Q Consensus 164 --------~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~----~~~~-----~~~~~~-- 224 (249)
++...|+.+|.+.+.+++.+.++. |+++..+.|+.|..|........ .... ......
T Consensus 122 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~----gl~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (315)
T d1e6ua_ 122 ELLQGTLEPTNEPYAIAKIAGIKLCESYNRQY----GRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPD 197 (315)
T ss_dssp GTTSSCCCGGGHHHHHHHHHHHHHHHHHHHHH----CCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSE
T ss_pred ccccCCCCCCCCHHHHHHHHHHHHHHHHHHHh----CCCEEEEeeccEECCCCCCCccccccceeeeccchhhhhccCCc
Confidence 234579999999999999998765 59999999999987644322221 1111 111011
Q ss_pred -------hcccCCCCHHHHHHHHHHhc
Q 025672 225 -------MAAYKFGEKWDIAMAALYLA 244 (249)
Q Consensus 225 -------~~~~~~~~~~dva~~v~~l~ 244 (249)
.+.+.+...+|+++++.+++
T Consensus 198 ~~~~g~g~~~~~~~~v~d~~~~~~~~~ 224 (315)
T d1e6ua_ 198 VVVWGSGTPMREFLHVDDMAAASIHVM 224 (315)
T ss_dssp EEEESCSCCEECEEEHHHHHHHHHHHH
T ss_pred eEEcCCCceEEEEEEeehhHHHHHHhh
Confidence 12234457789999998876
|
| >d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-N-acetylglucosamine 4-epimerase WbpP species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.73 E-value=1e-16 Score=133.15 Aligned_cols=209 Identities=16% Similarity=0.018 Sum_probs=146.1
Q ss_pred CCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcch----HHHHHHHHH-hcCCCeeEEEccCCCHHHHHHHHHHHH
Q 025672 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTV----LRSAVAALH-SLGIPAIGLEGDVRKREDAVRVVESTI 84 (249)
Q Consensus 10 l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~----~~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 84 (249)
.+.|++|||||+|.||++++++|.++|++|+.++|.... .+....... .....+.++.+|+.|.........
T Consensus 14 ~~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~--- 90 (341)
T d1sb8a_ 14 AQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACA--- 90 (341)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHT---
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeeccccccccccccc---
Confidence 456899999999999999999999999999999873322 222211111 112468999999999887665543
Q ss_pred HHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc--
Q 025672 85 NHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA-- 162 (249)
Q Consensus 85 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~-- 162 (249)
..+.++|.++.... ....++....+++|+.|+.++++++... +. .++|++||...+..
T Consensus 91 ----~~~~v~~~~a~~~~----~~~~~~~~~~~~~Nv~gt~~ll~~~~~~----~~--------~~~i~~SS~~vyg~~~ 150 (341)
T d1sb8a_ 91 ----GVDYVLHQAALGSV----PRSINDPITSNATNIDGFLNMLIAARDA----KV--------QSFTYAASSSTYGDHP 150 (341)
T ss_dssp ----TCSEEEECCSCCCH----HHHHHCHHHHHHHHTHHHHHHHHHHHHT----TC--------SEEEEEEEGGGGTTCC
T ss_pred ----cccccccccccccc----cccccCccchhheeehhHHHHHHHHHhc----CC--------ceEEEcccceeeCCCC
Confidence 57888888775331 1234566788999999999999888643 21 46999999765432
Q ss_pred ---------CccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCCh----HHHHHhhhhh--hc-
Q 025672 163 ---------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP----EEIRSKATDY--MA- 226 (249)
Q Consensus 163 ---------~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~----~~~~~~~~~~--~~- 226 (249)
..+...|+.+|.+.+.+++.+++.. ++++..+.|+.+.++........ ..+.+..... +.
T Consensus 151 ~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~----~i~~~ilR~~~v~G~~~~~~~~~~~~i~~~~~~~~~g~~i~~ 226 (341)
T d1sb8a_ 151 GLPKVEDTIGKPLSPYAVTKYVNELYADVFSRCY----GFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYI 226 (341)
T ss_dssp CSSBCTTCCCCCCSHHHHHHHHHHHHHHHHHHHH----CCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEE
T ss_pred CCCccCCCCCCCCCcchHHHHHHHHHHHHHHHHh----CCCeEEEEeceeeccCcCCCCchhhhHHHHHHHHHcCCceEE
Confidence 2245789999999999999998765 48899999998886644333221 2222322222 11
Q ss_pred ------ccCCCCHHHHHHHHHHhcc
Q 025672 227 ------AYKFGEKWDIAMAALYLAS 245 (249)
Q Consensus 227 ------~~~~~~~~dva~~v~~l~s 245 (249)
.+.+...+|++.++..++.
T Consensus 227 ~g~g~~~r~~i~v~D~~~a~~~~~~ 251 (341)
T d1sb8a_ 227 NGDGETSRDFCYIENTVQANLLAAT 251 (341)
T ss_dssp ESSSCCEECCEEHHHHHHHHHHHHT
T ss_pred cCCCCEEEEEEEEeccchhhhhhhh
Confidence 2235678999999888764
|
| >d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-glucose-4,6-dehydratase species: Yersinia pseudotuberculosis [TaxId: 633]
Probab=99.73 E-value=7.5e-17 Score=134.53 Aligned_cols=215 Identities=16% Similarity=0.103 Sum_probs=151.8
Q ss_pred CCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCC
Q 025672 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK 89 (249)
Q Consensus 10 l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 89 (249)
+++|+||||||+|.||+++++.|+++|++|++++|+......+.+... ....+.++.+|++|++.+.+++... .
T Consensus 6 ~~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~-~~~~i~~~~~Dl~d~~~l~~~~~~~-----~ 79 (356)
T d1rkxa_ 6 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETAR-VADGMQSEIGDIRDQNKLLESIREF-----Q 79 (356)
T ss_dssp HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTT-TTTTSEEEECCTTCHHHHHHHHHHH-----C
T ss_pred hCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhhh-cccCCeEEEeeccChHhhhhhhhhc-----h
Confidence 689999999999999999999999999999999998776554443332 2346899999999999999988765 7
Q ss_pred ccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc-------
Q 025672 90 LDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA------- 162 (249)
Q Consensus 90 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~------- 162 (249)
+|+++|.++.... ..+.+.....+++|+.++.++++++...-.. ..+++.|+......
T Consensus 80 ~~~v~~~aa~~~~----~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~~~-----------~~~~~~s~~~~~~~~~~~~~~ 144 (356)
T d1rkxa_ 80 PEIVFHMAAQPLV----RLSYSEPVETYSTNVMGTVYLLEAIRHVGGV-----------KAVVNITSDKCYDNKEWIWGY 144 (356)
T ss_dssp CSEEEECCSCCCH----HHHHHCHHHHHHHHTHHHHHHHHHHHHHCCC-----------CEEEEECCGGGBCCCCSSSCB
T ss_pred hhhhhhhhccccc----cccccCCccccccccccchhhhhhhhccccc-----------ccccccccccccccccccccc
Confidence 8999999985432 1223456778899999999999888754211 33555554433321
Q ss_pred -----CccchhhHHHHHHHHHHHHHHHHHhc-----CCCCeEEEEEecCccccccccCCC-ChHHHHHhhhhhhc-----
Q 025672 163 -----TWYQIHVSAAKAAVDSITRSLALEWG-----TDYAIRVNGIAPGPIKDTAGVSKL-APEEIRSKATDYMA----- 226 (249)
Q Consensus 163 -----~~~~~~y~~sK~a~~~l~~~la~e~~-----~~~gi~v~~v~pG~v~t~~~~~~~-~~~~~~~~~~~~~~----- 226 (249)
..+...|+.+|...+.+.+..+.++. ..+++.+..+.|+.+..+...... ....+.+......+
T Consensus 145 ~~~~~~~p~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~i~~~~~~~~~~~~~~~~~ 224 (356)
T d1rkxa_ 145 RENEAMGGYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIRN 224 (356)
T ss_dssp CTTSCBCCSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEECSC
T ss_pred ccccccCCCCccccccccchhhhhHHhhhcccchhccccCceEEeccCCCeeCCCcchhhHHHHHHHHHHhCCCceEEee
Confidence 12455699999999999999888753 134788999999988865432221 12333333333322
Q ss_pred ---ccCCCCHHHHHHHHHHhcc
Q 025672 227 ---AYKFGEKWDIAMAALYLAS 245 (249)
Q Consensus 227 ---~~~~~~~~dva~~v~~l~s 245 (249)
...+...+|++.++..++.
T Consensus 225 ~~~~~~~~~v~D~~~a~~~~~~ 246 (356)
T d1rkxa_ 225 PHAIRPWQHVLEPLSGYLLLAQ 246 (356)
T ss_dssp TTCEECCEETHHHHHHHHHHHH
T ss_pred ccccccccccccccchhhhhhh
Confidence 1123457899999887754
|
| >d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=99.71 E-value=3.4e-17 Score=136.49 Aligned_cols=205 Identities=17% Similarity=0.077 Sum_probs=137.8
Q ss_pred CcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCc--ch-HHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhC
Q 025672 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK--TV-LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (249)
Q Consensus 12 ~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~--~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 88 (249)
-|.||||||+|.||++++++|.++|++|.++.++. .. ....... -.+.++.++++|++|.+.+..++.
T Consensus 2 ~mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~~~~--~~~~~i~~~~~Di~d~~~~~~~~~------- 72 (346)
T d1oc2a_ 2 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEA--ILGDRVELVVGDIADAELVDKLAA------- 72 (346)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGG--GCSSSEEEEECCTTCHHHHHHHHT-------
T ss_pred cCEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHHHHHH--hhcCCeEEEEccCCCHHHHHHHHh-------
Confidence 47899999999999999999999998655444321 10 0000001 124579999999999999888764
Q ss_pred CccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc------
Q 025672 89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA------ 162 (249)
Q Consensus 89 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~------ 162 (249)
..|.++|.|+..... ....+....+++|+.|..+++.++...- .++|++||...+..
T Consensus 73 ~~~~v~~~a~~~~~~----~~~~~~~~~~~~N~~g~~nll~~~~~~~-------------~k~i~~ss~~vyg~~~~~~~ 135 (346)
T d1oc2a_ 73 KADAIVHYAAESHND----NSLNDPSPFIHTNFIGTYTLLEAARKYD-------------IRFHHVSTDEVYGDLPLRED 135 (346)
T ss_dssp TCSEEEECCSCCCHH----HHHHCCHHHHHHHTHHHHHHHHHHHHHT-------------CEEEEEEEGGGGCCBCCGGG
T ss_pred hhhhhhhhhhccccc----chhhCcccceeeehHhHHhhhhhhcccc-------------ccccccccceEecccCcccc
Confidence 578899998864421 1123346778999999999998775442 34777776654321
Q ss_pred -----------------CccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhh-
Q 025672 163 -----------------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDY- 224 (249)
Q Consensus 163 -----------------~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~- 224 (249)
..+...|+.+|.+.+.+++.+.+++ |+++..+.|+.+..|..........+.......
T Consensus 136 ~~~~~~~~~~~~~e~~~~~p~s~Y~~sK~~~E~~~~~~~~~~----~i~~~ilR~~~vyGp~~~~~~~~~~~i~~~~~~~ 211 (346)
T d1oc2a_ 136 LPGHGEGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSF----GVKATISNCSNNYGPYQHIEKFIPRQITNILAGI 211 (346)
T ss_dssp STTTTCSTTSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH----CCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTC
T ss_pred ccccccCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHc----CCCEEEEeecceeCCCCCccchhHHHHHHHHcCC
Confidence 1234579999999999999888764 599999999999875433222222222211111
Q ss_pred --------hcccCCCCHHHHHHHHHHhccC
Q 025672 225 --------MAAYKFGEKWDIAMAALYLASD 246 (249)
Q Consensus 225 --------~~~~~~~~~~dva~~v~~l~s~ 246 (249)
...+.+...+|++++++.++..
T Consensus 212 ~~~i~~~g~~~r~~i~v~D~a~a~~~~~~~ 241 (346)
T d1oc2a_ 212 KPKLYGEGKNVRDWIHTNDHSTGVWAILTK 241 (346)
T ss_dssp CCEEETTSCCEEECEEHHHHHHHHHHHHHH
T ss_pred ceeEeCCCCccccccchhhHHHHHHHHHhh
Confidence 1122356789999999887643
|
| >d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.71 E-value=1.9e-16 Score=131.74 Aligned_cols=170 Identities=15% Similarity=0.063 Sum_probs=124.3
Q ss_pred cEEEEecCCCchhHHHHHHHHHcCCeEEEEeCC------cchHHHHHHHHH-hcCCCeeEEEccCCCHHHHHHHHHHHHH
Q 025672 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR------KTVLRSAVAALH-SLGIPAIGLEGDVRKREDAVRVVESTIN 85 (249)
Q Consensus 13 k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~------~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 85 (249)
|+||||||+|.||++++++|+++|++|+.+++. ........+.+. -.+.++.++++|++|.+.++.++..
T Consensus 3 kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~--- 79 (346)
T d1ek6a_ 3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKK--- 79 (346)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHH---
T ss_pred CeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHhcCCCcEEEEeeccccccccccccc---
Confidence 678999999999999999999999999998741 111111122221 1246789999999999999998875
Q ss_pred HhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC--
Q 025672 86 HFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT-- 163 (249)
Q Consensus 86 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~-- 163 (249)
..+++++|.|+..... .+.++....+++|+.++.++++++... +. .+++++||...+...
T Consensus 80 --~~~~~i~h~Aa~~~~~----~~~~~p~~~~~~Nv~gt~~l~~~~~~~----~v--------~~~i~~ss~~~~~~~~~ 141 (346)
T d1ek6a_ 80 --YSFMAVIHFAGLKAVG----ESVQKPLDYYRVNLTGTIQLLEIMKAH----GV--------KNLVFSSSATVYGNPQY 141 (346)
T ss_dssp --CCEEEEEECCSCCCHH----HHHHCHHHHHHHHHHHHHHHHHHHHHT----TC--------CEEEEEEEGGGGCSCSS
T ss_pred --cccccccccccccCcH----hhHhCHHHHHHhhhcccccccchhhhc----Cc--------ccccccccceeeecccc
Confidence 3689999999964321 122345678899999999998887532 21 458888877544321
Q ss_pred ----------ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccc
Q 025672 164 ----------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDT 206 (249)
Q Consensus 164 ----------~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~ 206 (249)
.....|+.+|...+...+.+++. ..++....+.|+.+..+
T Consensus 142 ~~~~~~~~~~~~~~~Y~~~k~~~e~~~~~~~~~---~~~~~~~~lR~~~v~G~ 191 (346)
T d1ek6a_ 142 LPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQA---DKTWNAVLLRYFNPTGA 191 (346)
T ss_dssp SSBCTTSCCCCCSSHHHHHHHHHHHHHHHHHHH---CTTCEEEEEEECEEECC
T ss_pred ccccccccccccCChHHHHHHHHHHHHHHHHHh---ccCCceEEEeecceecc
Confidence 23457999999999999887764 44788888988888754
|
| >d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Biliverdin IX beta reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.70 E-value=6.6e-16 Score=119.30 Aligned_cols=186 Identities=16% Similarity=0.134 Sum_probs=122.7
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCc
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 90 (249)
..|+++||||+|+||++++++|+++|++|+++.|+.++++.. ....+.++.+|++|.+++.++++ ..
T Consensus 2 ~~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~------~~~~~~~~~gD~~d~~~l~~al~-------~~ 68 (205)
T d1hdoa_ 2 AVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE------GPRPAHVVVGDVLQAADVDKTVA-------GQ 68 (205)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS------SCCCSEEEESCTTSHHHHHHHHT-------TC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhcccc------cccccccccccccchhhHHHHhc-------CC
Confidence 457899999999999999999999999999999998764321 13468899999999999887765 57
Q ss_pred cEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCc----cc
Q 025672 91 DILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW----YQ 166 (249)
Q Consensus 91 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~----~~ 166 (249)
|+||+++|...... . .+++..+..+++++ +++.+. .++|++||........ ..
T Consensus 69 d~vi~~~g~~~~~~-----~------~~~~~~~~~~l~~a----a~~~~v--------~r~i~~ss~~~~~~~~~~~~~~ 125 (205)
T d1hdoa_ 69 DAVIVLLGTRNDLS-----P------TTVMSEGARNIVAA----MKAHGV--------DKVVACTSAFLLWDPTKVPPRL 125 (205)
T ss_dssp SEEEECCCCTTCCS-----C------CCHHHHHHHHHHHH----HHHHTC--------CEEEEECCGGGTSCTTCSCGGG
T ss_pred CEEEEEeccCCchh-----h------hhhhHHHHHHHHHH----HHhcCC--------CeEEEEeeeeccCCCccccccc
Confidence 99999998643211 1 12334444444444 444432 6799999876543322 22
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHHHHhccC
Q 025672 167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246 (249)
Q Consensus 167 ~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~ 246 (249)
..|...|...+.+ +. ..|++...|.||++.......... ...+......+.+.+|+|+.++.++.+
T Consensus 126 ~~~~~~~~~~e~~-------l~-~~~~~~tiirp~~~~~~~~~~~~~------~~~~~~~~~~~i~~~DvA~~~~~~l~~ 191 (205)
T d1hdoa_ 126 QAVTDDHIRMHKV-------LR-ESGLKYVAVMPPHIGDQPLTGAYT------VTLDGRGPSRVISKHDLGHFMLRCLTT 191 (205)
T ss_dssp HHHHHHHHHHHHH-------HH-HTCSEEEEECCSEEECCCCCSCCE------EESSSCSSCSEEEHHHHHHHHHHTTSC
T ss_pred cccchHHHHHHHH-------HH-hcCCceEEEecceecCCCCcccEE------EeeCCCCCCCcCCHHHHHHHHHHHhCC
Confidence 3445555444433 22 458999999999996432211110 011111223356789999999988854
|
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.70 E-value=2e-16 Score=130.03 Aligned_cols=200 Identities=14% Similarity=0.031 Sum_probs=134.7
Q ss_pred CcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcc-hHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCc
Q 025672 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT-VLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (249)
Q Consensus 12 ~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~-~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 90 (249)
.|++|||||+|.||++++++|+++|++|+.+++... ..+.+. .. ....++.+...|+.+. .+..+
T Consensus 1 kKKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~-~~-~~~~~~d~~~~~~~~~------------~~~~~ 66 (312)
T d2b69a1 1 RKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVE-HW-IGHENFELINHDVVEP------------LYIEV 66 (312)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTG-GG-TTCTTEEEEECCTTSC------------CCCCC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHHHH-Hh-cCCCceEEEehHHHHH------------HHcCC
Confidence 478999999999999999999999999999986322 111111 11 1123455555555432 12369
Q ss_pred cEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc---------
Q 025672 91 DILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT--------- 161 (249)
Q Consensus 91 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~--------- 161 (249)
|+|||+|+...... ...+..+.+++|+.+..++++++... +-++|++||...+.
T Consensus 67 d~VihlAa~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~~~~~-------------~~k~I~~SS~~vy~~~~~~~~~e 129 (312)
T d2b69a1 67 DQIYHLASPASPPN----YMYNPIKTLKTNTIGTLNMLGLAKRV-------------GARLLLASTSEVYGDPEVHPQSE 129 (312)
T ss_dssp SEEEECCSCCSHHH----HTTCHHHHHHHHHHHHHHHHHHHHHH-------------TCEEEEEEEGGGGBSCSSSSBCT
T ss_pred CEEEECcccCCchh----HHhCHHHHHHHHHHHHHHHHHHHHHc-------------CCcEEEEEChheecCCCCCCCCc
Confidence 99999998654211 11234677899999999999887543 14599999865442
Q ss_pred -------cCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCC--hHHHHHhhhhhhc--c---
Q 025672 162 -------ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA--PEEIRSKATDYMA--A--- 227 (249)
Q Consensus 162 -------~~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~--~~~~~~~~~~~~~--~--- 227 (249)
+..+...|+.+|.+.+.+++..++++ |+.+..+.|+.|..|....... ...+.......-+ .
T Consensus 130 ~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~----~~~~~~lR~~~vyGp~~~~~~~~~i~~~i~~~~~g~~i~i~~~ 205 (312)
T d2b69a1 130 DYWGHVNPIGPRACYDEGKRVAETMCYAYMKQE----GVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGS 205 (312)
T ss_dssp TCCCBCCSSSTTHHHHHHHHHHHHHHHHHHHHH----CCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESS
T ss_pred cccCCCCCCCCccHHHHHHHHHHHHHHHHHHHh----CCcEEEEEeeeEECCCCCCCCccHHHHHHHHHHcCCCeEEeCC
Confidence 12345779999999999999998875 5999999999999765443221 2233333222211 1
Q ss_pred ----cCCCCHHHHHHHHHHhccC
Q 025672 228 ----YKFGEKWDIAMAALYLASD 246 (249)
Q Consensus 228 ----~~~~~~~dva~~v~~l~s~ 246 (249)
+-+...+|+++++..++..
T Consensus 206 g~~~r~~i~v~D~~~~~~~~~~~ 228 (312)
T d2b69a1 206 GSQTRAFQYVSDLVNGLVALMNS 228 (312)
T ss_dssp SCCEEECEEHHHHHHHHHHHHTS
T ss_pred CCeeEccEEHHHHHHHHHHHHhh
Confidence 2245689999999988754
|
| >d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose-3', 5'-epimerase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.69 E-value=2.7e-16 Score=131.70 Aligned_cols=205 Identities=17% Similarity=0.038 Sum_probs=142.7
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCc
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 90 (249)
+++.||||||+|.||++++++|+++|++|+++++...... ...-....+..+|+.+.+.+..+++ .+
T Consensus 14 ~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~------~~~~~~~~~~~~D~~~~~~~~~~~~-------~~ 80 (363)
T d2c5aa1 14 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHM------TEDMFCDEFHLVDLRVMENCLKVTE-------GV 80 (363)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSS------CGGGTCSEEEECCTTSHHHHHHHHT-------TC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccch------hhhcccCcEEEeechhHHHHHHHhh-------cC
Confidence 5778999999999999999999999999999987644210 0111245678889999888766553 68
Q ss_pred cEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC-------
Q 025672 91 DILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT------- 163 (249)
Q Consensus 91 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~------- 163 (249)
|.|||.|+...... ...+.....+.+|+.++.+++.++...-. .++|++||...+...
T Consensus 81 d~Vih~a~~~~~~~---~~~~~~~~~~~~n~~gt~~ll~~~~~~~v------------k~~i~~SS~~~~~~~~~~~~~~ 145 (363)
T d2c5aa1 81 DHVFNLAADMGGMG---FIQSNHSVIMYNNTMISFNMIEAARINGI------------KRFFYASSACIYPEFKQLETTN 145 (363)
T ss_dssp SEEEECCCCCCCHH---HHTTCHHHHHHHHHHHHHHHHHHHHHTTC------------SEEEEEEEGGGSCGGGSSSSSS
T ss_pred CeEeeccccccccc---ccccccccccccccchhhHHHHhHHhhCc------------cccccccccccccccccccccc
Confidence 99999998654321 11234567788999999999888764421 459999997654321
Q ss_pred -----------ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCCh-----HHHHHhhhhhh--
Q 025672 164 -----------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP-----EEIRSKATDYM-- 225 (249)
Q Consensus 164 -----------~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~-----~~~~~~~~~~~-- 225 (249)
.+...|+.+|.+.+.+++.+.+++ |+++..+.|+.+..+........ ...........
T Consensus 146 ~~~~~~e~~~~~p~~~Yg~sK~~~E~~~~~~~~~~----gl~~~ilR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (363)
T d2c5aa1 146 VSLKESDAWPAEPQDAFGLEKLATEELCKHYNKDF----GIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRF 221 (363)
T ss_dssp CEECGGGGSSBCCSSHHHHHHHHHHHHHHHHHHHH----CCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCE
T ss_pred cccccccCCcCCCCCHHHHHHHHHHHHHHHHHHHh----CCCEEEEEeeeEeccCCcccccccccccccccccccccccc
Confidence 234579999999999999888765 59999999999986543322111 11111111111
Q ss_pred -------cccCCCCHHHHHHHHHHhccCC
Q 025672 226 -------AAYKFGEKWDIAMAALYLASDA 247 (249)
Q Consensus 226 -------~~~~~~~~~dva~~v~~l~s~~ 247 (249)
+.+.+...+|+++++..++...
T Consensus 222 ~~~g~g~~~rd~i~v~D~~~~~~~~~~~~ 250 (363)
T d2c5aa1 222 EMWGDGLQTRSFTFIDECVEGVLRLTKSD 250 (363)
T ss_dssp EEESCSCCEECCEEHHHHHHHHHHHHHSS
T ss_pred cccCCCCeEEEEeehhHHHHHHHHHHhCC
Confidence 1233677899999999887543
|
| >d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Polymyxin resistance protein ArnA (PrmI) species: Escherichia coli [TaxId: 562]
Probab=99.68 E-value=4.1e-16 Score=129.45 Aligned_cols=201 Identities=14% Similarity=0.031 Sum_probs=139.8
Q ss_pred EEEEecCCCchhHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCccE
Q 025672 14 VALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI 92 (249)
Q Consensus 14 ~~lItGa~~giG~~~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ 92 (249)
++|||||+|.||++++++|+++|. +|+.+++......... ...++.++++|+++.+++.+.+.+ .+|+
T Consensus 2 KILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~-----~~~~~~~i~~Di~~~~~~~~~~~~------~~d~ 70 (342)
T d2blla1 2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL-----NHPHFHFVEGDISIHSEWIEYHVK------KCDV 70 (342)
T ss_dssp EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGT-----TCTTEEEEECCTTTCSHHHHHHHH------HCSE
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhc-----cCCCeEEEECccCChHHHHHHHHh------CCCc
Confidence 489999999999999999999994 8999988655433222 135799999999998776654321 4899
Q ss_pred EEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC---------
Q 025672 93 LVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT--------- 163 (249)
Q Consensus 93 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~--------- 163 (249)
|||+|+..... ...++....+++|+.|+.++++++... +-+++++||...+...
T Consensus 71 Vih~a~~~~~~----~~~~~~~~~~~~nv~gt~~ll~~~~~~-------------~~~~~~~ss~~~~~~~~~~~~~~~~ 133 (342)
T d2blla1 71 VLPLVAIATPI----EYTRNPLRVFELDFEENLRIIRYCVKY-------------RKRIIFPSTSEVYGMCSDKYFDEDH 133 (342)
T ss_dssp EEECBCCCCHH----HHHHSHHHHHHHHTHHHHHHHHHHHHT-------------TCEEEEECCGGGGBTCCCSSBCTTT
T ss_pred ccccccccccc----ccccCCccccccccccccccccccccc-------------ccccccccccccccccccccccccc
Confidence 99999965421 122334678999999999999987533 1446777775543221
Q ss_pred ---------ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCC--------hHHHHHhhhhhh-
Q 025672 164 ---------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA--------PEEIRSKATDYM- 225 (249)
Q Consensus 164 ---------~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~--------~~~~~~~~~~~~- 225 (249)
.+...|+.+|.+.+.+++.+++.+ |+.+..+.|..+..+....... ...+...+...-
T Consensus 134 ~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~----~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 209 (342)
T d2blla1 134 SNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKE----GLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSP 209 (342)
T ss_dssp CCCBCCCTTCGGGHHHHHHHHHHHHHHHHHHHH----CCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCC
T ss_pred ccccccccCCCcchhhhcccchhhhhhhhhccc----CceeEEeeccccccccccccccccccccccchHHHHHHHhCCC
Confidence 234679999999999999998765 5888899888887653322211 122222222111
Q ss_pred --------cccCCCCHHHHHHHHHHhccC
Q 025672 226 --------AAYKFGEKWDIAMAALYLASD 246 (249)
Q Consensus 226 --------~~~~~~~~~dva~~v~~l~s~ 246 (249)
..+-+...+|+++++..++..
T Consensus 210 ~~~~~~g~~~r~~i~v~D~~~a~~~~~~~ 238 (342)
T d2blla1 210 IKLIDGGKQKRCFTDIRDGIEALYRIIEN 238 (342)
T ss_dssp EEEGGGSCCEEECEEHHHHHHHHHHHHHC
T ss_pred ccccCCCCeeeeecccccccceeeeehhh
Confidence 112266899999999999854
|
| >d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptomyces venezuelae [TaxId: 54571]
Probab=99.67 E-value=2.9e-16 Score=129.49 Aligned_cols=205 Identities=17% Similarity=0.092 Sum_probs=141.9
Q ss_pred EEEEecCCCchhHHHHHHHHHcCCeEE------EEeCCcc--hHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHH
Q 025672 14 VALLTGGGSGIGFEISLQLGKHGAAIA------IMGRRKT--VLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN 85 (249)
Q Consensus 14 ~~lItGa~~giG~~~a~~l~~~G~~v~------l~~r~~~--~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 85 (249)
++|||||+|.||++++++|+++|+.|. .++.... ....+ ..+ ....++.++..|+++........
T Consensus 2 kIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~~~~-~~~-~~~~~~~~~~~d~~~~~~~~~~~----- 74 (322)
T d1r6da_ 2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANL-APV-DADPRLRFVHGDIRDAGLLAREL----- 74 (322)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGG-GGG-TTCTTEEEEECCTTCHHHHHHHT-----
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccHhHh-hhh-hcCCCeEEEEeccccchhhhccc-----
Confidence 589999999999999999999998543 3332211 11111 111 22457899999999998776543
Q ss_pred HhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC--
Q 025672 86 HFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT-- 163 (249)
Q Consensus 86 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~-- 163 (249)
..+|.|+|.|+..... .........+++|+.++.++++++... +. .++|++||...+.+.
T Consensus 75 --~~~d~vi~~a~~~~~~----~~~~~~~~~~~~N~~gt~~ll~~~~~~----~~--------~~~I~~Ss~~~yg~~~~ 136 (322)
T d1r6da_ 75 --RGVDAIVHFAAESHVD----RSIAGASVFTETNVQGTQTLLQCAVDA----GV--------GRVVHVSTNQVYGSIDS 136 (322)
T ss_dssp --TTCCEEEECCSCCCHH----HHHHCCHHHHHHHTHHHHHHHHHHHHT----TC--------CEEEEEEEGGGGCCCSS
T ss_pred --cccceEEeeccccccc----ccccchHHHhhhhHHHHHHHHHHHHHc----CC--------ceEEEeecceeecCCCC
Confidence 3689999999864321 223445677899999999999988643 21 559999998655332
Q ss_pred ---------ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcc-------
Q 025672 164 ---------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAA------- 227 (249)
Q Consensus 164 ---------~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~------- 227 (249)
.+...|+.+|.+.+.+++.+++++ |+.+..+.|+.+..+..........+.......-++
T Consensus 137 ~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~----~~~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~~~~i~v~~~g~ 212 (322)
T d1r6da_ 137 GSWTESSPLEPNSPYAASKAGSDLVARAYHRTY----GLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGA 212 (322)
T ss_dssp SCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH----CCCEEEEEECEEECTTCCTTSHHHHHHHHHHTTCCEEEETTSC
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh----CCCEEEEEeeeEECcCCCcCcHHHHHHHHHHcCCCcEEecCCC
Confidence 244679999999999999998765 599999999999976543332233443333322221
Q ss_pred --cCCCCHHHHHHHHHHhccCC
Q 025672 228 --YKFGEKWDIAMAALYLASDA 247 (249)
Q Consensus 228 --~~~~~~~dva~~v~~l~s~~ 247 (249)
+.+...+|+|+++.+++...
T Consensus 213 ~~r~~i~v~D~a~ai~~~~~~~ 234 (322)
T d1r6da_ 213 NVREWVHTDDHCRGIALVLAGG 234 (322)
T ss_dssp CEEEEEEHHHHHHHHHHHHHHC
T ss_pred eEEccEEHHHHHHHHHHHHhCC
Confidence 12457899999999988643
|
| >d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: TAT-interacting protein TIP30 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.64 E-value=4.7e-16 Score=122.48 Aligned_cols=196 Identities=15% Similarity=0.096 Sum_probs=131.6
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCC--eEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHH
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGA--AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~--~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 86 (249)
.+++|++|||||||.||++++++|+++|. +|++++|++..... .....+.+..+|+.+.+++..+
T Consensus 11 ~m~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~------~~~~~i~~~~~D~~~~~~~~~~------- 77 (232)
T d2bkaa1 11 RMQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDE------EAYKNVNQEVVDFEKLDDYASA------- 77 (232)
T ss_dssp HHTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCS------GGGGGCEEEECCGGGGGGGGGG-------
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcc------cccceeeeeeeccccccccccc-------
Confidence 36789999999999999999999999996 79999998654321 1123566777888877665444
Q ss_pred hCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccc
Q 025672 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ 166 (249)
Q Consensus 87 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~ 166 (249)
+...|++||++|... .........++|+.++..+++.+.. .+. .++|++|+....... .
T Consensus 78 ~~~~d~vi~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~a~~----~~v--------~~fi~~Ss~~~~~~~--~ 136 (232)
T d2bkaa1 78 FQGHDVGFCCLGTTR-------GKAGAEGFVRVDRDYVLKSAELAKA----GGC--------KHFNLLSSKGADKSS--N 136 (232)
T ss_dssp GSSCSEEEECCCCCH-------HHHHHHHHHHHHTHHHHHHHHHHHH----TTC--------CEEEEECCTTCCTTC--S
T ss_pred ccccccccccccccc-------cccchhhhhhhcccccceeeecccc----cCc--------cccccCCccccccCc--c
Confidence 346899999998431 2344566788999999998887753 222 569999998765443 4
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcCCCCe-EEEEEecCccccccccCCCChHHHHHhhhhhhc----ccCCCCHHHHHHHHH
Q 025672 167 IHVSAAKAAVDSITRSLALEWGTDYAI-RVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMA----AYKFGEKWDIAMAAL 241 (249)
Q Consensus 167 ~~y~~sK~a~~~l~~~la~e~~~~~gi-~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~dva~~v~ 241 (249)
..|+.+|...+...+ ..|. ++..+.||.+..+.... ...+.+...+....+ ..+..+.+|+|++++
T Consensus 137 ~~Y~~~K~~~E~~l~--------~~~~~~~~IlRP~~i~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~I~~~dvA~a~i 207 (232)
T d2bkaa1 137 FLYLQVKGEVEAKVE--------ELKFDRYSVFRPGVLLCDRQES-RPGEWLVRKFFGSLPDSWASGHSVPVVTVVRAML 207 (232)
T ss_dssp SHHHHHHHHHHHHHH--------TTCCSEEEEEECCEEECTTGGG-SHHHHHHHHHHCSCCTTGGGGTEEEHHHHHHHHH
T ss_pred chhHHHHHHhhhccc--------cccccceEEecCceeecCCCcC-cHHHHHHHHHhhccCCcccCCCeEEHHHHHHHHH
Confidence 569999987775442 2233 46778999998653222 112222222222221 223456799999988
Q ss_pred HhccCC
Q 025672 242 YLASDA 247 (249)
Q Consensus 242 ~l~s~~ 247 (249)
.++...
T Consensus 208 ~~~~~~ 213 (232)
T d2bkaa1 208 NNVVRP 213 (232)
T ss_dssp HHHTSC
T ss_pred HHHhcC
Confidence 776443
|
| >d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Trypanosoma brucei [TaxId: 5691]
Probab=99.63 E-value=9.6e-15 Score=123.02 Aligned_cols=174 Identities=17% Similarity=0.069 Sum_probs=126.2
Q ss_pred CcEEEEecCCCchhHHHHHHHHH-cCCeEEEEeC---------CcchHHHHHHHHHhc--------CCCeeEEEccCCCH
Q 025672 12 GKVALLTGGGSGIGFEISLQLGK-HGAAIAIMGR---------RKTVLRSAVAALHSL--------GIPAIGLEGDVRKR 73 (249)
Q Consensus 12 ~k~~lItGa~~giG~~~a~~l~~-~G~~v~l~~r---------~~~~~~~~~~~~~~~--------~~~~~~~~~Dl~~~ 73 (249)
+..||||||+|.||++++++|++ .|++|+++|+ +.+..+.....+... ...+.++.+|++|.
T Consensus 2 ~MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~ 81 (383)
T d1gy8a_ 2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE 81 (383)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred cCEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCH
Confidence 45799999999999999999986 6889999874 122233333333221 34578999999999
Q ss_pred HHHHHHHHHHHHHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEE
Q 025672 74 EDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIIN 153 (249)
Q Consensus 74 ~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~ 153 (249)
+.++++++.. .++|+|||.|+..... ...+.....+++|+.+..+++.++..... .++++
T Consensus 82 ~~l~~~~~~~----~~~d~ViH~Aa~~~~~----~~~~~~~~~~~~N~~~t~~~l~~~~~~~~------------~~~~~ 141 (383)
T d1gy8a_ 82 DFLNGVFTRH----GPIDAVVHMCAFLAVG----ESVRDPLKYYDNNVVGILRLLQAMLLHKC------------DKIIF 141 (383)
T ss_dssp HHHHHHHHHS----CCCCEEEECCCCCCHH----HHHHCHHHHHHHHHHHHHHHHHHHHHTTC------------CEEEE
T ss_pred HHhhhhhhcc----ceeehhhccccccccc----ccccccccccccccccccccchhhhccCC------------ccccc
Confidence 9998888653 5789999999965421 12344567788999999999888874321 34666
Q ss_pred eccccccc------------------cCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccccccc
Q 025672 154 ISATLHYT------------------ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGV 209 (249)
Q Consensus 154 iss~~~~~------------------~~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~ 209 (249)
+++...+. +..+...|+.+|.+.+.+++.+...+ |+.+..+.|+.+..+...
T Consensus 142 ~~s~~~~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~----gl~~~~lR~~~vyG~~~~ 211 (383)
T d1gy8a_ 142 SSSAAIFGNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAY----GIKGICLRYFNACGAHED 211 (383)
T ss_dssp EEEGGGTBSCCC-----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHH----CCEEEEEEECEEECCCTT
T ss_pred ccccccccccccccccccccccccccCCCCCCHHHhhHhHHHHHHHHHHHHh----CCCEEEEecceeeccCcc
Confidence 66554332 11245779999999999999888754 599999999998866543
|
| >d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein At5g02240 (T7H20 290) species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.62 E-value=2.9e-15 Score=117.55 Aligned_cols=202 Identities=12% Similarity=0.007 Sum_probs=126.1
Q ss_pred cEEEEecCCCchhHHHHHHHHHcCCe--EEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCc
Q 025672 13 KVALLTGGGSGIGFEISLQLGKHGAA--IAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (249)
Q Consensus 13 k~~lItGa~~giG~~~a~~l~~~G~~--v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 90 (249)
++||||||+|+||++++++|+++|++ |+.+.|+++..+ ....+++++.+|+++.+++.++++ .+
T Consensus 4 ~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~-------~~~~~~~~~~~d~~~~~~~~~~~~-------~~ 69 (252)
T d2q46a1 4 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKE-------KIGGEADVFIGDITDADSINPAFQ-------GI 69 (252)
T ss_dssp CEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHH-------HTTCCTTEEECCTTSHHHHHHHHT-------TC
T ss_pred CEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHH-------hccCCcEEEEeeeccccccccccc-------cc
Confidence 69999999999999999999999975 555677765432 223578899999999999887764 58
Q ss_pred cEEEEcCCCCCCCC---------CCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc
Q 025672 91 DILVNAAAGNFLVP---------AEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT 161 (249)
Q Consensus 91 d~vi~~ag~~~~~~---------~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~ 161 (249)
|.|||+++...... ..............+|+.+...++....... .+...+.++.....
T Consensus 70 d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~s~~~~~~ 137 (252)
T d2q46a1 70 DALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAG------------VKHIVVVGSMGGTN 137 (252)
T ss_dssp SEEEECCCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHT------------CSEEEEEEETTTTC
T ss_pred eeeEEEEeeccccccccchhhhhhcccccccchhhhccccccceeecccccccc------------ccccccccccccCC
Confidence 99999998643210 1111223355667788888888776655432 15577777766555
Q ss_pred cCccchhhHHHH-HHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhcccCCCCHHHHHHHH
Q 025672 162 ATWYQIHVSAAK-AAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAA 240 (249)
Q Consensus 162 ~~~~~~~y~~sK-~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v 240 (249)
+..+...+...+ .....+...+.. ..|+++..+.||++..+............... ......+.+.+|+|+++
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~--~~~~~~~i~~~Dva~a~ 211 (252)
T d2q46a1 138 PDHPLNKLGNGNILVWKRKAEQYLA----DSGTPYTIIRAGGLLDKEGGVRELLVGKDDEL--LQTDTKTVPRADVAEVC 211 (252)
T ss_dssp TTCGGGGGGGCCHHHHHHHHHHHHH----HSSSCEEEEEECEEECSCTTSSCEEEESTTGG--GGSSCCEEEHHHHHHHH
T ss_pred CCcccccccccchhhhhhhhhhhhh----cccccceeecceEEECCCcchhhhhhccCccc--ccCCCCeEEHHHHHHHH
Confidence 443333332222 222222222222 45799999999999865322111000000000 01112355789999999
Q ss_pred HHhccC
Q 025672 241 LYLASD 246 (249)
Q Consensus 241 ~~l~s~ 246 (249)
+.++.+
T Consensus 212 ~~~l~~ 217 (252)
T d2q46a1 212 IQALLF 217 (252)
T ss_dssp HHHTTC
T ss_pred HHHhCC
Confidence 988764
|
| >d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein PA4017 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.44 E-value=1.3e-13 Score=106.56 Aligned_cols=188 Identities=15% Similarity=0.091 Sum_probs=116.0
Q ss_pred CcEEEEecCCCchhHHHHHHHHHcCC--eEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCC
Q 025672 12 GKVALLTGGGSGIGFEISLQLGKHGA--AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK 89 (249)
Q Consensus 12 ~k~~lItGa~~giG~~~a~~l~~~G~--~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 89 (249)
.|++|||||||.||++++++|+++|+ +|+...|+... ...+ +..+..|..++.. ...+.
T Consensus 2 ~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~----------~~~~---~~~~~~d~~~~~~------~~~~~ 62 (212)
T d2a35a1 2 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA----------EHPR---LDNPVGPLAELLP------QLDGS 62 (212)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC----------CCTT---EECCBSCHHHHGG------GCCSC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchh----------hccc---ccccccchhhhhh------ccccc
Confidence 58999999999999999999999998 56666765431 1122 3445555444321 12357
Q ss_pred ccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccchhh
Q 025672 90 LDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHV 169 (249)
Q Consensus 90 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y 169 (249)
+|.+|+++|..... ...-....++|+.++.++++++.. .+. .+++++||..+... ....|
T Consensus 63 ~d~vi~~~g~~~~~------~~~~~~~~~~~~~~~~~~~~~a~~----~~v--------~~~i~~Ss~~~~~~--~~~~y 122 (212)
T d2a35a1 63 IDTAFCCLGTTIKE------AGSEEAFRAVDFDLPLAVGKRALE----MGA--------RHYLVVSALGADAK--SSIFY 122 (212)
T ss_dssp CSEEEECCCCCHHH------HSSHHHHHHHHTHHHHHHHHHHHH----TTC--------CEEEEECCTTCCTT--CSSHH
T ss_pred hheeeeeeeeeccc------cccccccccchhhhhhhccccccc----ccc--------cccccccccccccc--cccch
Confidence 89999999854211 122356778899999888887642 222 56999998765433 34568
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCe-EEEEEecCccccccccCCCChHHHHHhhhhhhc-ccCCCCHHHHHHHHHHhccCC
Q 025672 170 SAAKAAVDSITRSLALEWGTDYAI-RVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMA-AYKFGEKWDIAMAALYLASDA 247 (249)
Q Consensus 170 ~~sK~a~~~l~~~la~e~~~~~gi-~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~dva~~v~~l~s~~ 247 (249)
..+|...+.+.+ ..+. +...+.|+.+..+...... ...+...+....+ ..++...+|+|+++.+++.++
T Consensus 123 ~~~K~~~E~~l~--------~~~~~~~~I~Rp~~v~G~~~~~~~-~~~~~~~~~~~~~~~~~~i~v~DvA~ai~~~~~~~ 193 (212)
T d2a35a1 123 NRVKGELEQALQ--------EQGWPQLTIARPSLLFGPREEFRL-AEILAAPIARILPGKYHGIEACDLARALWRLALEE 193 (212)
T ss_dssp HHHHHHHHHHHT--------TSCCSEEEEEECCSEESTTSCEEG-GGGTTCCCC----CHHHHHHHHHHHHHHHHHHTCC
T ss_pred hHHHHHHhhhcc--------ccccccceeeCCcceeCCcccccH-HHHHHHHHhhccCCCCcEEEHHHHHHHHHHHHcCC
Confidence 999977665442 2233 5778899999754321110 0000000000000 012356799999999988664
|
| >d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: DTDP-4-dehydrorhamnose reductase RfbD species: Clostridium acetobutylicum [TaxId: 1488]
Probab=99.38 E-value=5e-12 Score=101.18 Aligned_cols=180 Identities=13% Similarity=0.107 Sum_probs=119.5
Q ss_pred cEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCccE
Q 025672 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI 92 (249)
Q Consensus 13 k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ 92 (249)
..+|||||+|.||++++++|.++|++|+.++|++ +|++|.++++++++.. .+|+
T Consensus 2 MKIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~---------------------~D~~d~~~~~~~l~~~-----~~d~ 55 (281)
T d1vl0a_ 2 MKILITGANGQLGREIQKQLKGKNVEVIPTDVQD---------------------LDITNVLAVNKFFNEK-----KPNV 55 (281)
T ss_dssp EEEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT---------------------CCTTCHHHHHHHHHHH-----CCSE
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEeechh---------------------ccCCCHHHHHHHHHHc-----CCCE
Confidence 3589999999999999999999999999999864 4999999999988765 6899
Q ss_pred EEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc-----------
Q 025672 93 LVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT----------- 161 (249)
Q Consensus 93 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~----------- 161 (249)
|||+++..... .........+..|+.....+........ ..+++.||...+.
T Consensus 56 vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~~~~~~~~-------------~~~~~~ss~~v~~~~~~~~~~e~~ 118 (281)
T d1vl0a_ 56 VINCAAHTAVD----KCEEQYDLAYKINAIGPKNLAAAAYSVG-------------AEIVQISTDYVFDGEAKEPITEFD 118 (281)
T ss_dssp EEECCCCCCHH----HHHHCHHHHHHHHTHHHHHHHHHHHHHT-------------CEEEEEEEGGGSCSCCSSCBCTTS
T ss_pred EEeeccccccc----cccccchhhccccccccccccccccccc-------------ccccccccceeeeccccccccccc
Confidence 99998854311 1223345667778877777766554331 3355665543221
Q ss_pred cCccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCChHHHHHhhhhhhc-------ccCCCCHH
Q 025672 162 ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMA-------AYKFGEKW 234 (249)
Q Consensus 162 ~~~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~ 234 (249)
+..+...|+.+|...+.+.+ +. +.+...+.|+++..+... ....+........+ .+.+...+
T Consensus 119 ~~~~~~~~~~~k~~~e~~~~----~~----~~~~~i~R~~~vyG~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~v~ 187 (281)
T d1vl0a_ 119 EVNPQSAYGKTKLEGENFVK----AL----NPKYYIVRTAWLYGDGNN---FVKTMINLGKTHDELKVVHDQVGTPTSTV 187 (281)
T ss_dssp CCCCCSHHHHHHHHHHHHHH----HH----CSSEEEEEECSEESSSSC---HHHHHHHHHHHCSEEEEESSCEECCEEHH
T ss_pred cccchhhhhhhhhHHHHHHH----Hh----CCCccccceeEEeCCCcc---cccchhhhhccCCceeecCCceeccchhh
Confidence 12345568888877665542 22 456778999999854321 12223322222211 12355789
Q ss_pred HHHHHHHHhccC
Q 025672 235 DIAMAALYLASD 246 (249)
Q Consensus 235 dva~~v~~l~s~ 246 (249)
|+++++.+++..
T Consensus 188 D~~~~~~~~~~~ 199 (281)
T d1vl0a_ 188 DLARVVLKVIDE 199 (281)
T ss_dssp HHHHHHHHHHHH
T ss_pred hhhhhhhhhhhh
Confidence 999999988753
|
| >d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Phenylcoumaran benzylic ether reductase species: Loblolly pine (Pinus taeda) [TaxId: 3352]
Probab=99.37 E-value=5.2e-12 Score=101.72 Aligned_cols=194 Identities=14% Similarity=0.047 Sum_probs=113.5
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHH--HHHHH-hcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSA--VAALH-SLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~--~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
+.|+||||||+|.||++++++|+++|++|++++|+....... ...+. .....+.++.+|+.+.....+.++
T Consensus 2 ~kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~------ 75 (307)
T d1qyca_ 2 SRSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVK------ 75 (307)
T ss_dssp CCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHH------
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhccCCcEEEEeecccchhhhhhhh------
Confidence 368899999999999999999999999999999976543211 11111 123468899999999998777765
Q ss_pred CCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch
Q 025672 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 167 (249)
Q Consensus 88 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~ 167 (249)
..+.++++++.. +..+...+.+++... .. ..+++.||...........
T Consensus 76 -~~~~vi~~~~~~-------------------~~~~~~~~~~a~~~~----~~--------~~~~~~s~~~~~~~~~~~~ 123 (307)
T d1qyca_ 76 -NVDVVISTVGSL-------------------QIESQVNIIKAIKEV----GT--------VKRFFPSEFGNDVDNVHAV 123 (307)
T ss_dssp -TCSEEEECCCGG-------------------GSGGGHHHHHHHHHH----CC--------CSEEECSCCSSCTTSCCCC
T ss_pred -hceeeeeccccc-------------------ccchhhHHHHHHHHh----cc--------ccceeeecccccccccccc
Confidence 478899988632 222223333333322 11 3366767654443333333
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCC------hHHHHHhhhhhhcccCCCCHHHHHHHHH
Q 025672 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA------PEEIRSKATDYMAAYKFGEKWDIAMAAL 241 (249)
Q Consensus 168 ~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~dva~~v~ 241 (249)
.+...+............+ .|+....+.|+.+..+....... .......+........+...+|+|+++.
T Consensus 124 ~~~~~~~~~~~~~~~~~~~----~~~~~~i~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~ 199 (307)
T d1qyca_ 124 EPAKSVFEVKAKVRRAIEA----EGIPYTYVSSNCFAGYFLRSLAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTI 199 (307)
T ss_dssp TTHHHHHHHHHHHHHHHHH----HTCCBEEEECCEEHHHHTTTTTCTTCSSCCSSEEEEETTSCCEEEEECHHHHHHHHH
T ss_pred ccccccccccccccchhhc----cCCCceecccceecCCCccchhhhhhhhhhcccceeeecccccccCCcHHHHHHHHH
Confidence 3333333333333333333 35777888998887432111000 0000000111112233568899999999
Q ss_pred HhccC
Q 025672 242 YLASD 246 (249)
Q Consensus 242 ~l~s~ 246 (249)
.++.+
T Consensus 200 ~~l~~ 204 (307)
T d1qyca_ 200 KAVDD 204 (307)
T ss_dssp TTSSC
T ss_pred HHhcC
Confidence 88864
|
| >d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Pinoresinol-lariciresinol reductase species: Giant arborvitae (Thuja plicata) [TaxId: 3316]
Probab=99.33 E-value=9.9e-12 Score=100.62 Aligned_cols=193 Identities=15% Similarity=0.040 Sum_probs=111.7
Q ss_pred CcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchH--HHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCC
Q 025672 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVL--RSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK 89 (249)
Q Consensus 12 ~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~--~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 89 (249)
.++||||||+|.||++++++|+++|++|+++.|+.... .............+.++++|++|.+++.+.++ .
T Consensus 3 k~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~~v~~v~~d~~d~~~~~~~~~-------~ 75 (312)
T d1qyda_ 3 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALK-------Q 75 (312)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHT-------T
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhccCCcEEEEeecccchhhhhhcc-------C
Confidence 46699999999999999999999999999999975432 22111111224568899999999998877765 5
Q ss_pred ccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC-----c
Q 025672 90 LDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT-----W 164 (249)
Q Consensus 90 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~-----~ 164 (249)
.+.++++++.... ..|..+...++.++. +.. ..++++.||....... .
T Consensus 76 ~~~~~~~~~~~~~---------------~~~~~~~~~~l~~a~----~~~--------~~~~v~~Ss~g~~~~~~~~~~~ 128 (312)
T d1qyda_ 76 VDVVISALAGGVL---------------SHHILEQLKLVEAIK----EAG--------NIKRFLPSEFGMDPDIMEHALQ 128 (312)
T ss_dssp CSEEEECCCCSSS---------------STTTTTHHHHHHHHH----HSC--------CCSEEECSCCSSCTTSCCCCCS
T ss_pred cchhhhhhhhccc---------------ccchhhhhHHHHHHH----Hhc--------CCcEEEEeeccccCCCcccccc
Confidence 7888888874321 123334444444433 222 1446777765433221 1
Q ss_pred cchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCCC-------hHHHHHhhhhhhcccCCCCHHHHH
Q 025672 165 YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA-------PEEIRSKATDYMAAYKFGEKWDIA 237 (249)
Q Consensus 165 ~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~dva 237 (249)
+...|..+|.. ...... ..|+....+.||.+..+....... .......+........+...+|+|
T Consensus 129 ~~~~~~~~~~~----~~~~~~----~~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva 200 (312)
T d1qyda_ 129 PGSITFIDKRK----VRRAIE----AASIPYTYVSSNMFAGYFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVG 200 (312)
T ss_dssp STTHHHHHHHH----HHHHHH----HTTCCBCEEECCEEHHHHTTTSSCTTCCSSCCSSEECCBTTSCSEEEEECHHHHH
T ss_pred hhhhhhHHHHH----HHHhhc----ccccceEEeccceeecCCccchhhHHHHhhhcccccccccccccccceeeHHHHH
Confidence 22334444333 333322 346778888888886422111000 000000011111122356889999
Q ss_pred HHHHHhccC
Q 025672 238 MAALYLASD 246 (249)
Q Consensus 238 ~~v~~l~s~ 246 (249)
++++.++.+
T Consensus 201 ~a~~~~l~~ 209 (312)
T d1qyda_ 201 TYTIKSIDD 209 (312)
T ss_dssp HHHHHHTTC
T ss_pred HHHHHHhcC
Confidence 999887754
|
| >d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) species: Salmonella enterica serovar typhimurium [TaxId: 90371]
Probab=99.23 E-value=1.1e-11 Score=99.68 Aligned_cols=128 Identities=17% Similarity=0.200 Sum_probs=91.8
Q ss_pred EEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCccEE
Q 025672 14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDIL 93 (249)
Q Consensus 14 ~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~v 93 (249)
.+|||||+|.||++++++|.++|. ++.++++... +..|++|.+.++++++.. .+|+|
T Consensus 2 KILItG~tGfiG~~l~~~L~~~g~-~v~~~~~~~~-----------------~~~Dl~~~~~~~~~i~~~-----~~D~V 58 (298)
T d1n2sa_ 2 NILLFGKTGQVGWELQRSLAPVGN-LIALDVHSKE-----------------FCGDFSNPKGVAETVRKL-----RPDVI 58 (298)
T ss_dssp EEEEECTTSHHHHHHHHHTTTTSE-EEEECTTCSS-----------------SCCCTTCHHHHHHHHHHH-----CCSEE
T ss_pred EEEEECCCCHHHHHHHHHHHhCCC-EEEEECCCcc-----------------ccCcCCCHHHHHHHHHHc-----CCCEE
Confidence 489999999999999999999985 4455554431 346999999999998765 69999
Q ss_pred EEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC----------
Q 025672 94 VNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT---------- 163 (249)
Q Consensus 94 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~---------- 163 (249)
||+||...... ..+.-...+++|+.+..+++.++.. . +.+++++||...+...
T Consensus 59 ih~Aa~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~---------~~~~~~~ss~~~~~~~~~~~~~E~~~ 121 (298)
T d1n2sa_ 59 VNAAAHTAVDK----AESEPELAQLLNATSVEAIAKAANE----T---------GAWVVHYSTDYVFPGTGDIPWQETDA 121 (298)
T ss_dssp EECCCCCCHHH----HTTCHHHHHHHHTHHHHHHHHHHTT----T---------TCEEEEEEEGGGSCCCTTCCBCTTSC
T ss_pred EEecccccccc----cccCccccccccccccccchhhhhc----c---------ccccccccccccccCCCCCCCccccc
Confidence 99999654221 1223466788999999888887642 1 2557777776543221
Q ss_pred -ccchhhHHHHHHHHHHHH
Q 025672 164 -WYQIHVSAAKAAVDSITR 181 (249)
Q Consensus 164 -~~~~~y~~sK~a~~~l~~ 181 (249)
.+...|+.+|.+.+.+.+
T Consensus 122 ~~p~~~y~~~k~~~e~~~~ 140 (298)
T d1n2sa_ 122 TSPLNVYGKTKLAGEKALQ 140 (298)
T ss_dssp CCCSSHHHHHHHHHHHHHH
T ss_pred cCCCchHhhhhhhhhhhHH
Confidence 234579999987766553
|
| >d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: ADP-L-glycero-D-mannoheptose 6-epimerase species: Escherichia coli [TaxId: 562]
Probab=99.19 E-value=8.5e-11 Score=94.74 Aligned_cols=198 Identities=15% Similarity=0.100 Sum_probs=116.8
Q ss_pred EEEecCCCchhHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHH--HhCCcc
Q 025672 15 ALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN--HFGKLD 91 (249)
Q Consensus 15 ~lItGa~~giG~~~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~--~~~~id 91 (249)
||||||+|.||++++++|+++|+ .|+.+++-... .+..... . ...+|..+.+. ....... .+..++
T Consensus 2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~-~~~~~~~-~------~~~~~~~~~~~---~~~~~~~~~~~~~~~ 70 (307)
T d1eq2a_ 2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDG-TKFVNLV-D------LNIADYMDKED---FLIQIMAGEEFGDVE 70 (307)
T ss_dssp EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSG-GGGHHHH-T------SCCSEEEEHHH---HHHHHHTTCCCSSCC
T ss_pred EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCc-chhhccc-c------cchhhhccchH---HHHHHhhhhcccchh
Confidence 79999999999999999999997 58777632221 1111111 1 11123333333 3333322 345788
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC--------
Q 025672 92 ILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT-------- 163 (249)
Q Consensus 92 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~-------- 163 (249)
+++|.|+..... ........+.|+.+...++.++...- -++++.||.....+.
T Consensus 71 ~i~~~aa~~~~~------~~~~~~~~~~~~~~~~~~l~~~~~~~-------------i~~v~~ss~~~~~~~~~~~~~~~ 131 (307)
T d1eq2a_ 71 AIFHEGACSSTT------EWDGKYMMDNNYQYSKELLHYCLERE-------------IPFLYASSAATYGGRTSDFIESR 131 (307)
T ss_dssp EEEECCSCCCTT------CCCHHHHHHHTHHHHHHHHHHHHHHT-------------CCEEEEEEGGGGTTCCSCBCSSG
T ss_pred hhhhhccccccc------cccccccccccccccccccccccccc-------------ccccccccccccccccccccccc
Confidence 999988743321 12234566788888888877665432 225555554443221
Q ss_pred ---ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccccccccCCC----ChHHHHHhhhhh----------hc
Q 025672 164 ---WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL----APEEIRSKATDY----------MA 226 (249)
Q Consensus 164 ---~~~~~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~----~~~~~~~~~~~~----------~~ 226 (249)
.+...|+.+|.+.+.+.+.+.. ..++.+..+.|..+..+...... ....+.+.+... ..
T Consensus 132 ~~~~~~~~Y~~~K~~~e~~~~~~~~----~~~~~~~~~r~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 207 (307)
T d1eq2a_ 132 EYEKPLNVYGYSKFLFDEYVRQILP----EANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENF 207 (307)
T ss_dssp GGCCCSSHHHHHHHHHHHHHHHHGG----GCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------
T ss_pred cccccccccccccchhhhhcccccc----ccccccccccceeEeeccccccccccccccccccccccccceeeecCccce
Confidence 3456799999999999887764 44688999999888765432211 111222222111 11
Q ss_pred ccCCCCHHHHHHHHHHhccC
Q 025672 227 AYKFGEKWDIAMAALYLASD 246 (249)
Q Consensus 227 ~~~~~~~~dva~~v~~l~s~ 246 (249)
.+.+...+|++.++..++..
T Consensus 208 ~r~~~~v~d~~~~~~~~~~~ 227 (307)
T d1eq2a_ 208 KRDFVYVGDVADVNLWFLEN 227 (307)
T ss_dssp CBCEEEHHHHHHHHHHHHHH
T ss_pred eeeeeecccHHHHHHHHhhh
Confidence 22345688999999877643
|
| >d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO) species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.16 E-value=8.9e-16 Score=117.40 Aligned_cols=46 Identities=24% Similarity=0.394 Sum_probs=41.8
Q ss_pred EEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhc
Q 025672 14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL 59 (249)
Q Consensus 14 ~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~ 59 (249)
++.|+||+|++|+++|+.|++.|++|++.+|++++++++.+++...
T Consensus 2 ki~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~~~~l~~~i~~~ 47 (212)
T d1jaya_ 2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRI 47 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHH
T ss_pred EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc
Confidence 4678888899999999999999999999999999999999988644
|
| >d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Negative transcriptional regulator NmrA species: Aspergillus nidulans [TaxId: 162425]
Probab=99.14 E-value=4.8e-10 Score=92.52 Aligned_cols=148 Identities=11% Similarity=0.044 Sum_probs=95.3
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHH-HHHHHHHHHHHhCC
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKRED-AVRVVESTINHFGK 89 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~-~~~~~~~~~~~~~~ 89 (249)
++|+++||||+|.||++++++|+++|++|+++.|+...... ..+. ....+.++++|+.|..+ ++.+ +..
T Consensus 2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~--~~~~-~~~~v~~~~gD~~d~~~~~~~a-------~~~ 71 (350)
T d1xgka_ 2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIA--EELQ-AIPNVTLFQGPLLNNVPLMDTL-------FEG 71 (350)
T ss_dssp CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHH--HHHH-TSTTEEEEESCCTTCHHHHHHH-------HTT
T ss_pred CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhhh--hhhc-ccCCCEEEEeeCCCcHHHHHHH-------hcC
Confidence 57999999999999999999999999999999998775432 2222 23468999999999765 3333 346
Q ss_pred ccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc--Cccch
Q 025672 90 LDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA--TWYQI 167 (249)
Q Consensus 90 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~--~~~~~ 167 (249)
.|.++.+..... ..++....+++.++.. .+. .+++..||...... .....
T Consensus 72 ~~~~~~~~~~~~----------------~~~~~~~~~~~~aa~~----agv--------~~~v~~Ss~~~~~~~~~~~~~ 123 (350)
T d1xgka_ 72 AHLAFINTTSQA----------------GDEIAIGKDLADAAKR----AGT--------IQHYIYSSMPDHSLYGPWPAV 123 (350)
T ss_dssp CSEEEECCCSTT----------------SCHHHHHHHHHHHHHH----HSC--------CSEEEEEECCCGGGTSSCCCC
T ss_pred CceEEeeccccc----------------chhhhhhhHHHHHHHH----hCC--------CceEEEeeccccccCCcccch
Confidence 788777654211 1123333444444432 221 34777777654433 23344
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccc
Q 025672 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK 204 (249)
Q Consensus 168 ~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~pG~v~ 204 (249)
.|..+|.....+.+ ..++....+.||++.
T Consensus 124 ~~~~~k~~~~~~~~--------~~~~~~~~vr~~~~~ 152 (350)
T d1xgka_ 124 PMWAPKFTVENYVR--------QLGLPSTFVYAGIYN 152 (350)
T ss_dssp TTTHHHHHHHHHHH--------TSSSCEEEEEECEEG
T ss_pred hhhhhHHHHHHHHH--------hhccCceeeeeceee
Confidence 56677765544332 335777788888875
|
| >d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Putative shikimate dehydrogenase YdiB species: Escherichia coli [TaxId: 562]
Probab=98.30 E-value=6e-06 Score=61.12 Aligned_cols=86 Identities=23% Similarity=0.307 Sum_probs=65.2
Q ss_pred CCCCCCcEEEEecCCCchhHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhc--CCCeeEEEccCCCHHHHHHHHHHH
Q 025672 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVEST 83 (249)
Q Consensus 7 ~~~l~~k~~lItGa~~giG~~~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~ 83 (249)
..++++|+++|.|+ ||.|++++..|.+.|. +++++.|+.++.+++.+.++.. .........|+.+.+++.....
T Consensus 13 ~~~l~~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 89 (182)
T d1vi2a1 13 GFDIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALA-- 89 (182)
T ss_dssp TCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHH--
T ss_pred CCCcCCCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeecccccchhhhhc--
Confidence 34689999999998 6999999999999998 6999999988776654433221 1224455679999887766654
Q ss_pred HHHhCCccEEEEcCCCC
Q 025672 84 INHFGKLDILVNAAAGN 100 (249)
Q Consensus 84 ~~~~~~id~vi~~ag~~ 100 (249)
..|+|||+....
T Consensus 90 -----~~diiIN~Tp~G 101 (182)
T d1vi2a1 90 -----SADILTNGTKVG 101 (182)
T ss_dssp -----TCSEEEECSSTT
T ss_pred -----ccceeccccCCc
Confidence 589999997653
|
| >d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamyl tRNA-reductase middle domain species: Archaeon Methanopyrus kandleri [TaxId: 2320]
Probab=98.22 E-value=5.8e-06 Score=59.80 Aligned_cols=73 Identities=21% Similarity=0.311 Sum_probs=57.7
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
+++++++||.|+ |++|+.+++.|..+|+ ++.++.|+.++.+.+++++. ...+ +.+++...+
T Consensus 21 ~l~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~-----~~~~-----~~~~~~~~l------- 82 (159)
T d1gpja2 21 SLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLG-----GEAV-----RFDELVDHL------- 82 (159)
T ss_dssp CCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHT-----CEEC-----CGGGHHHHH-------
T ss_pred CcccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhh-----cccc-----cchhHHHHh-------
Confidence 578999999998 9999999999999998 69999999999888888773 1222 233444433
Q ss_pred CCccEEEEcCCC
Q 025672 88 GKLDILVNAAAG 99 (249)
Q Consensus 88 ~~id~vi~~ag~ 99 (249)
...|+||++.+.
T Consensus 83 ~~~Divi~atss 94 (159)
T d1gpja2 83 ARSDVVVSATAA 94 (159)
T ss_dssp HTCSEEEECCSS
T ss_pred ccCCEEEEecCC
Confidence 368999999884
|
| >d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Saccharopine reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=98.20 E-value=3.3e-06 Score=61.88 Aligned_cols=76 Identities=16% Similarity=0.130 Sum_probs=58.0
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCc
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 90 (249)
+.|.++|.|+ |.+|+.+|+.|+++|++|++++|+.++.+.+.+++ ........+..+....+..+. ..
T Consensus 1 ~~K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~~----~~~~~~~~~~~~~~~~~~~i~-------~~ 68 (182)
T d1e5qa1 1 ATKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGV----QHSTPISLDVNDDAALDAEVA-------KH 68 (182)
T ss_dssp CCCEEEEECC-STTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTTC----TTEEEEECCTTCHHHHHHHHT-------TS
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhcc----cccccccccccchhhhHhhhh-------cc
Confidence 3689999987 89999999999999999999999999888776544 334555566666666666543 46
Q ss_pred cEEEEcCC
Q 025672 91 DILVNAAA 98 (249)
Q Consensus 91 d~vi~~ag 98 (249)
|.++....
T Consensus 69 ~~~i~~~~ 76 (182)
T d1e5qa1 69 DLVISLIP 76 (182)
T ss_dssp SEEEECSC
T ss_pred ceeEeecc
Confidence 77776543
|
| >d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase species: Guinea pig (Cavia porcellus) [TaxId: 10141]
Probab=98.06 E-value=1e-05 Score=59.77 Aligned_cols=79 Identities=9% Similarity=0.127 Sum_probs=56.6
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCc
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 90 (249)
+|.++||+||+|++|...+......|++|+.+.+++++.+.+. ..|....+ |-.+++..+.+.+.. ....+
T Consensus 29 ~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~~~~----~~Ga~~vi---~~~~~~~~~~~~~~~--~~~Gv 99 (182)
T d1v3va2 29 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLK----QIGFDAAF---NYKTVNSLEEALKKA--SPDGY 99 (182)
T ss_dssp SSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH----HTTCSEEE---ETTSCSCHHHHHHHH--CTTCE
T ss_pred CCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHHHHHH----hhhhhhhc---ccccccHHHHHHHHh--hcCCC
Confidence 5899999999999999999999999999999998877644333 34444333 444444444443322 22469
Q ss_pred cEEEEcCC
Q 025672 91 DILVNAAA 98 (249)
Q Consensus 91 d~vi~~ag 98 (249)
|+++.+.|
T Consensus 100 d~v~D~vG 107 (182)
T d1v3va2 100 DCYFDNVG 107 (182)
T ss_dssp EEEEESSC
T ss_pred ceeEEecC
Confidence 99999998
|
| >d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn Mja218 species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=98.03 E-value=7.7e-06 Score=57.16 Aligned_cols=73 Identities=18% Similarity=0.354 Sum_probs=58.8
Q ss_pred EEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCccEE
Q 025672 14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDIL 93 (249)
Q Consensus 14 ~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~v 93 (249)
+++|.|+ |.+|+.+++.|.++|+.|++++.+++..+++.+++ ...++..|.++++.++++- ....|.+
T Consensus 2 ~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~~-----~~~vi~Gd~~~~~~l~~~~------i~~a~~v 69 (132)
T d1lssa_ 2 YIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEI-----DALVINGDCTKIKTLEDAG------IEDADMY 69 (132)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC-----SSEEEESCTTSHHHHHHTT------TTTCSEE
T ss_pred EEEEECC-CHHHHHHHHHHHHCCCCcceecCChhhhhhhhhhh-----hhhhccCcccchhhhhhcC------hhhhhhh
Confidence 6789987 89999999999999999999999998887765543 3668889999999877662 2357888
Q ss_pred EEcCC
Q 025672 94 VNAAA 98 (249)
Q Consensus 94 i~~ag 98 (249)
+....
T Consensus 70 v~~t~ 74 (132)
T d1lssa_ 70 IAVTG 74 (132)
T ss_dssp EECCS
T ss_pred cccCC
Confidence 77543
|
| >d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Escherichia coli [TaxId: 562]
Probab=98.01 E-value=1.6e-05 Score=58.10 Aligned_cols=77 Identities=21% Similarity=0.244 Sum_probs=58.9
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
..+++|.++|.|+ ||.+++++..|.+.|.+|+++.|+.++.+.+.+.+...+ .+..+ +..+. ..
T Consensus 14 ~~~~~k~vlIlGa-GGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~~~-~~~~~--~~~~~------------~~ 77 (170)
T d1nyta1 14 FIRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTG-SIQAL--SMDEL------------EG 77 (170)
T ss_dssp CCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGS-SEEEC--CSGGG------------TT
T ss_pred CCCCCCEEEEECC-cHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHhhcc-ccccc--ccccc------------cc
Confidence 4578999999997 699999999999999999999999999999888886543 23332 22211 11
Q ss_pred CCccEEEEcCCCC
Q 025672 88 GKLDILVNAAAGN 100 (249)
Q Consensus 88 ~~id~vi~~ag~~ 100 (249)
...|++||+....
T Consensus 78 ~~~dliIN~Tp~G 90 (170)
T d1nyta1 78 HEFDLIINATSSG 90 (170)
T ss_dssp CCCSEEEECCSCG
T ss_pred cccceeecccccC
Confidence 3689999987644
|
| >d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: 2,4-dienoyl-CoA reductase species: Yeast (Candida tropicalis) [TaxId: 5482]
Probab=98.00 E-value=1.1e-05 Score=59.99 Aligned_cols=86 Identities=21% Similarity=0.193 Sum_probs=59.5
Q ss_pred CcEEEE-ecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHH-HhCC
Q 025672 12 GKVALL-TGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN-HFGK 89 (249)
Q Consensus 12 ~k~~lI-tGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~-~~~~ 89 (249)
|.+++| +||+|++|.....-....|++|+.+.|+.+..++..+.+.+.|....+. .|-.+..++...+.++.+ ..+.
T Consensus 29 g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~~~lGad~vi~-~~~~~~~~~~~~v~~~~~~~g~~ 107 (189)
T d1gu7a2 29 GKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVIT-EDQNNSREFGPTIKEWIKQSGGE 107 (189)
T ss_dssp TTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCSEEEE-HHHHHCGGGHHHHHHHHHHHTCC
T ss_pred CCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhhhhccccEEEe-ccccchhHHHHHHHHHHhhccCC
Confidence 555555 6999999999998888899999999988888887777777666544332 222222333444444443 3357
Q ss_pred ccEEEEcCC
Q 025672 90 LDILVNAAA 98 (249)
Q Consensus 90 id~vi~~ag 98 (249)
+|+++.+.|
T Consensus 108 vdvv~D~vg 116 (189)
T d1gu7a2 108 AKLALNCVG 116 (189)
T ss_dssp EEEEEESSC
T ss_pred ceEEEECCC
Confidence 999999887
|
| >d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.00 E-value=1.3e-05 Score=58.67 Aligned_cols=79 Identities=15% Similarity=0.144 Sum_probs=55.3
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCc
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 90 (249)
+|.++||+||+|++|...+......|++|+.+++++++.+.+. +.|..- + .|.++.+-.+.+.+... -..+
T Consensus 28 ~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~~~~~----~~Ga~~-v--i~~~~~~~~~~i~~~t~--~~g~ 98 (174)
T d1yb5a2 28 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVL----QNGAHE-V--FNHREVNYIDKIKKYVG--EKGI 98 (174)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH----HTTCSE-E--EETTSTTHHHHHHHHHC--TTCE
T ss_pred CCCEEEEEeccccccccccccccccCccccccccccccccccc----ccCccc-c--cccccccHHHHhhhhhc--cCCc
Confidence 5889999999999999999999899999999998876554433 334432 2 36666544343333221 1359
Q ss_pred cEEEEcCC
Q 025672 91 DILVNAAA 98 (249)
Q Consensus 91 d~vi~~ag 98 (249)
|+++.+.|
T Consensus 99 d~v~d~~g 106 (174)
T d1yb5a2 99 DIIIEMLA 106 (174)
T ss_dssp EEEEESCH
T ss_pred eEEeeccc
Confidence 99999876
|
| >d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]
Probab=97.97 E-value=3.3e-05 Score=56.17 Aligned_cols=82 Identities=20% Similarity=0.270 Sum_probs=57.3
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhC-C
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG-K 89 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~-~ 89 (249)
.|.+++|+| +|+||...+..+...|++|+++++++++++...+ .+....+. .|- ..++.....+++.+..| .
T Consensus 26 ~g~~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a~~----~ga~~~~~-~~~-~~~~~~~~~~~~~~~~g~g 98 (170)
T d1e3ja2 26 LGTTVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKN----CGADVTLV-VDP-AKEEESSIIERIRSAIGDL 98 (170)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----TTCSEEEE-CCT-TTSCHHHHHHHHHHHSSSC
T ss_pred CCCEEEEEc-ccccchhhHhhHhhhcccccccchHHHHHHHHHH----cCCcEEEe-ccc-cccccchhhhhhhcccccC
Confidence 477899997 6899999999999999999999999887655433 24333322 222 22344455555555553 7
Q ss_pred ccEEEEcCCC
Q 025672 90 LDILVNAAAG 99 (249)
Q Consensus 90 id~vi~~ag~ 99 (249)
+|++|.++|.
T Consensus 99 ~D~vid~~g~ 108 (170)
T d1e3ja2 99 PNVTIDCSGN 108 (170)
T ss_dssp CSEEEECSCC
T ss_pred CceeeecCCC
Confidence 9999999983
|
| >d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Lactobacillus pentosus [TaxId: 1589]
Probab=97.91 E-value=0.00023 Score=50.32 Aligned_cols=114 Identities=14% Similarity=0.199 Sum_probs=70.5
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCC--eEEEEeCCcchHHHHHHHHHhc---CCCeeEEEccCCCHHHHHHHHHHHHH
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGA--AIAIMGRRKTVLRSAVAALHSL---GIPAIGLEGDVRKREDAVRVVESTIN 85 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~--~v~l~~r~~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~~~ 85 (249)
+++.+.|+|+ |.+|..+|..|+.+|. +|+++|+++++.+....++.+. .....+...|. +
T Consensus 4 ~~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d~---~----------- 68 (146)
T d1ez4a1 4 NHQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEY---S----------- 68 (146)
T ss_dssp TBCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCG---G-----------
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEeeccH---H-----------
Confidence 4668888996 8999999999999984 7999999998877666666542 22334444442 1
Q ss_pred HhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecc
Q 025672 86 HFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISA 156 (249)
Q Consensus 86 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss 156 (249)
....-|++|.++|..... .++-...+..|+ .+++.+.+.+.+..+ .+.++++|.
T Consensus 69 ~~~~adivvitag~~~~~------g~~r~~l~~~N~----~i~~~~~~~i~~~~p-------~aivivvtN 122 (146)
T d1ez4a1 69 DCKDADLVVITAGAPQKP------GESRLDLVNKNL----NILSSIVKPVVDSGF-------DGIFLVAAN 122 (146)
T ss_dssp GGTTCSEEEECCCC----------------CHHHHH----HHHHHHHHHHHHTTC-------CSEEEECSS
T ss_pred HhccccEEEEecccccCC------CCCHHHHHHHHH----HHHHHHHHHHhhcCC-------CcEEEEeCC
Confidence 223579999999854321 122234455554 455555666655543 355666664
|
| >d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.88 E-value=9.5e-05 Score=53.07 Aligned_cols=121 Identities=12% Similarity=0.166 Sum_probs=76.1
Q ss_pred CCCCCCCCcEEEEecCCCchhHHHHHHHHHcCC--eEEEEeCCcchHHHHHHHHHhcC----CCeeEEEccCCCHHHHHH
Q 025672 5 FKGDILKGKVALLTGGGSGIGFEISLQLGKHGA--AIAIMGRRKTVLRSAVAALHSLG----IPAIGLEGDVRKREDAVR 78 (249)
Q Consensus 5 ~~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~--~v~l~~r~~~~~~~~~~~~~~~~----~~~~~~~~Dl~~~~~~~~ 78 (249)
.+...++...+.|+|+ |.+|..+|..|+.+|. +++++|++++.++....++.+.. ........|. +
T Consensus 12 ~~~~~~~~~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~~d~---~---- 83 (159)
T d2ldxa1 12 VPEDKLSRCKITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKIVFGKDY---N---- 83 (159)
T ss_dssp SSCCCCCCCEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEESSG---G----
T ss_pred cccccCCCCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeEEeccch---h----
Confidence 4445566677888896 9999999999999986 79999999988877777776432 1222222222 1
Q ss_pred HHHHHHHHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccc
Q 025672 79 VVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISAT 157 (249)
Q Consensus 79 ~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~ 157 (249)
....-|++|..+|...... .+. ...++.|+ .+++.+.+.+.+..+ .+.++++|..
T Consensus 84 -------~~~~adivvitag~~~~~~---~~R---~dll~~N~----~i~~~i~~~i~~~~p-------~~ivivvtNP 138 (159)
T d2ldxa1 84 -------VSANSKLVIITAGARMVSG---QTR---LDLLQRNV----AIMKAIVPGVIQNSP-------DCKIIVVTNP 138 (159)
T ss_dssp -------GGTTEEEEEECCSCCCCTT---TCS---SCTTHHHH----HHHHHHTTTHHHHST-------TCEEEECSSS
T ss_pred -------hhccccEEEEecccccCCC---CCH---HHHHHHHH----HHHHHHHHHHhccCC-------CeEEEEeCCc
Confidence 2245799999998643221 121 12234443 345555666655443 3667777763
|
| >d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Haemophilus influenzae [TaxId: 727]
Probab=97.86 E-value=4.5e-05 Score=55.62 Aligned_cols=78 Identities=15% Similarity=0.214 Sum_probs=59.3
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
.++++|+++|.|+ ||.+++++..|.+.+.+|+++.|+.++.+.+.+.+.... .+..+..|-. ..
T Consensus 14 ~~~~~k~vlIlGa-GGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~~-~~~~~~~~~~--------------~~ 77 (171)
T d1p77a1 14 WLRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYG-NIQAVSMDSI--------------PL 77 (171)
T ss_dssp CCCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGS-CEEEEEGGGC--------------CC
T ss_pred CCCCCCEEEEECC-cHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhhcc-ccchhhhccc--------------cc
Confidence 4678999999987 688999999999988899999999999999999886533 3444443321 12
Q ss_pred CCccEEEEcCCCCC
Q 025672 88 GKLDILVNAAAGNF 101 (249)
Q Consensus 88 ~~id~vi~~ag~~~ 101 (249)
...|++||+.....
T Consensus 78 ~~~diiIN~tp~g~ 91 (171)
T d1p77a1 78 QTYDLVINATSAGL 91 (171)
T ss_dssp SCCSEEEECCCC--
T ss_pred cccceeeecccccc
Confidence 46899999977543
|
| >d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=97.83 E-value=0.00025 Score=50.19 Aligned_cols=115 Identities=13% Similarity=0.183 Sum_probs=73.2
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCC--eEEEEeCCcchHHHHHHHHHhc----CCCeeEEEccCCCHHHHHHHHHHHH
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGA--AIAIMGRRKTVLRSAVAALHSL----GIPAIGLEGDVRKREDAVRVVESTI 84 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~--~v~l~~r~~~~~~~~~~~~~~~----~~~~~~~~~Dl~~~~~~~~~~~~~~ 84 (249)
.++.+.|+|+ |.+|..+|..|+.+|. +++|+|++++.++....++.+. ...+.+...|. +
T Consensus 5 ~~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d~---~---------- 70 (148)
T d1ldna1 5 GGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDY---D---------- 70 (148)
T ss_dssp TSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCG---G----------
T ss_pred CCCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEECCH---H----------
Confidence 4678889997 8999999999999986 7999999998877777777543 12233333332 1
Q ss_pred HHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccc
Q 025672 85 NHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISAT 157 (249)
Q Consensus 85 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~ 157 (249)
.+..-|++|.++|...... .+. .+.+..|. .+++.+.+.+.+..+ .+.++++|..
T Consensus 71 -~l~daDvvvitag~~~~~~---~~R---~dl~~~N~----~i~~~i~~~i~~~~p-------~a~~ivvtNP 125 (148)
T d1ldna1 71 -DCRDADLVVICAGANQKPG---ETR---LDLVDKNI----AIFRSIVESVMASGF-------QGLFLVATNP 125 (148)
T ss_dssp -GTTTCSEEEECCSCCCCTT---TCS---GGGHHHHH----HHHHHHHHHHHHHTC-------CSEEEECSSS
T ss_pred -HhccceeEEEecccccccC---cch---hHHHHHHH----HHHHHHHHHHHhhCC-------CceEEEecCc
Confidence 1235799999998643211 121 23344453 345555555555443 3667777654
|
| >d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative enoyl reductase domain of polyketide synthase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=97.83 E-value=2.9e-05 Score=57.09 Aligned_cols=77 Identities=22% Similarity=0.254 Sum_probs=54.9
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh--C
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF--G 88 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~--~ 88 (249)
+|.++||+||+|++|...+..+...|++|+.+.+++++.+. +.+.|... + .|-.+++-.+ ++++.. .
T Consensus 25 ~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~~~----l~~~Ga~~-v--i~~~~~~~~~----~v~~~t~~~ 93 (183)
T d1pqwa_ 25 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREM----LSRLGVEY-V--GDSRSVDFAD----EILELTDGY 93 (183)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHH----HHTTCCSE-E--EETTCSTHHH----HHHHHTTTC
T ss_pred CCCEEEEECCCCCcccccchhhccccccceeeecccccccc----cccccccc-c--ccCCccCHHH----HHHHHhCCC
Confidence 47899999999999999999998999999999988765543 33445442 2 2555543333 333322 3
Q ss_pred CccEEEEcCC
Q 025672 89 KLDILVNAAA 98 (249)
Q Consensus 89 ~id~vi~~ag 98 (249)
.+|+++.+.|
T Consensus 94 g~d~v~d~~g 103 (183)
T d1pqwa_ 94 GVDVVLNSLA 103 (183)
T ss_dssp CEEEEEECCC
T ss_pred CEEEEEeccc
Confidence 6999999987
|
| >d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=97.82 E-value=1.8e-05 Score=49.56 Aligned_cols=43 Identities=19% Similarity=0.259 Sum_probs=38.0
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHH
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAV 53 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~ 53 (249)
++.++||+||+||+|......+...|++|+.+.+++++.+.+.
T Consensus 31 ~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~~~~~ 73 (77)
T d1o8ca2 31 QDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLK 73 (77)
T ss_dssp GGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHH
T ss_pred CCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHHHHHHH
Confidence 5889999999999999999988889999999999888766553
|
| >d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Escherichia coli [TaxId: 562]
Probab=97.82 E-value=2.6e-05 Score=57.17 Aligned_cols=80 Identities=15% Similarity=0.089 Sum_probs=57.4
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCc
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 90 (249)
.|.+++|+||+|++|..++......|++|+.+++++++.+.++ ++ |.. ++ +|-++++-.+++.+ .. .-..+
T Consensus 28 ~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~~-~l---Ga~-~v--i~~~~~d~~~~v~~-~t-~g~g~ 98 (179)
T d1qora2 28 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSAL-KA---GAW-QV--INYREEDLVERLKE-IT-GGKKV 98 (179)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-HH---TCS-EE--EETTTSCHHHHHHH-HT-TTCCE
T ss_pred CCCEEEEEccccccchHHHHHHHHhCCeEeecccchHHHHHHH-hc---CCe-EE--EECCCCCHHHHHHH-Hh-CCCCe
Confidence 4889999999999999999999999999999999988766544 33 433 22 36666543333322 21 12368
Q ss_pred cEEEEcCCC
Q 025672 91 DILVNAAAG 99 (249)
Q Consensus 91 d~vi~~ag~ 99 (249)
|+++.+.|.
T Consensus 99 d~v~d~~g~ 107 (179)
T d1qora2 99 RVVYDSVGR 107 (179)
T ss_dssp EEEEECSCG
T ss_pred EEEEeCccH
Confidence 999998873
|
| >d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: B. subtilis YhfP homologue species: Bacillus stearothermophilus [TaxId: 1422]
Probab=97.80 E-value=4.1e-05 Score=56.12 Aligned_cols=78 Identities=15% Similarity=0.158 Sum_probs=52.3
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCc
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 90 (249)
+|.++||+||+||+|.....-....|++|+.+.+++++.+.+. ..|....+ |-.+. ..+....+ .-+++
T Consensus 31 ~g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~~----~lGa~~vi---~~~~~--~~~~~~~~--~~~gv 99 (176)
T d1xa0a2 31 ERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLR----VLGAKEVL---AREDV--MAERIRPL--DKQRW 99 (176)
T ss_dssp GGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHH----HTTCSEEE---ECC-----------C--CSCCE
T ss_pred CCCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHHHHHH----hcccceee---ecchh--HHHHHHHh--hccCc
Confidence 4789999999999999999888899999999999888765543 23444322 32221 12222111 22479
Q ss_pred cEEEEcCCC
Q 025672 91 DILVNAAAG 99 (249)
Q Consensus 91 d~vi~~ag~ 99 (249)
|+|+.+.|.
T Consensus 100 D~vid~vgg 108 (176)
T d1xa0a2 100 AAAVDPVGG 108 (176)
T ss_dssp EEEEECSTT
T ss_pred CEEEEcCCc
Confidence 999999984
|
| >d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]
Probab=97.79 E-value=0.00044 Score=49.46 Aligned_cols=119 Identities=14% Similarity=0.122 Sum_probs=77.4
Q ss_pred CCCCCCcEEEEecCCCchhHHHHHHHHHcCC--eEEEEeCCcchHHHHHHHHHhc----CCCeeEEEccCCCHHHHHHHH
Q 025672 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGA--AIAIMGRRKTVLRSAVAALHSL----GIPAIGLEGDVRKREDAVRVV 80 (249)
Q Consensus 7 ~~~l~~k~~lItGa~~giG~~~a~~l~~~G~--~v~l~~r~~~~~~~~~~~~~~~----~~~~~~~~~Dl~~~~~~~~~~ 80 (249)
...+..+.+.|+|+ |.+|..+|..|+.+|. +++++|++++..+....++.+. +........| .++
T Consensus 15 ~~~~~~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~~~~~d---~~~----- 85 (160)
T d1i0za1 15 EATVPNNKITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVADKD---YSV----- 85 (160)
T ss_dssp CCCCCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEEEECSS---GGG-----
T ss_pred cccCCCCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccCCCeEEeccc---hhh-----
Confidence 44466788899996 8999999999999997 7999999988887777777542 2222222222 222
Q ss_pred HHHHHHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccc
Q 025672 81 ESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISAT 157 (249)
Q Consensus 81 ~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~ 157 (249)
...-|+||..||.... + ..+. ...++.|+ .+++.+.+.+.+..+ .+.++++|..
T Consensus 86 ------~~~adiVVitAg~~~~-~--g~tR---~~l~~~N~----~i~~~i~~~i~~~~p-------~aiiivvtNP 139 (160)
T d1i0za1 86 ------TANSKIVVVTAGVRQQ-E--GESR---LNLVQRNV----NVFKFIIPQIVKYSP-------DCIIIVVSNP 139 (160)
T ss_dssp ------GTTCSEEEECCSCCCC-T--TCCG---GGGHHHHH----HHHHHHHHHHHHHCT-------TCEEEECSSS
T ss_pred ------cccccEEEEecCCccc-c--Ccch---HHHHHHHH----HHHHHHHHHHHhcCC-------CcEEEEeCCc
Confidence 2357999999996432 1 1222 23344554 356666666666543 3667777764
|
| >d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Thermus thermophilus [TaxId: 274]
Probab=97.74 E-value=6.9e-05 Score=54.55 Aligned_cols=75 Identities=16% Similarity=0.260 Sum_probs=53.0
Q ss_pred CCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCC
Q 025672 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK 89 (249)
Q Consensus 10 l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 89 (249)
-.|.++||+||+|++|...+..+...|++|+.+++++++.+.+. +.|....+ |..+. . .+. .....
T Consensus 26 ~~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~~~----~lGa~~~i---~~~~~--~----~~~-~~~~g 91 (171)
T d1iz0a2 26 RPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPL----ALGAEEAA---TYAEV--P----ERA-KAWGG 91 (171)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHH----HTTCSEEE---EGGGH--H----HHH-HHTTS
T ss_pred CCCCEEEEEeccccchhhhhhhhccccccccccccccccccccc----ccccceee---ehhhh--h----hhh-hcccc
Confidence 36899999999999999999988899999999998887766543 23443222 33221 1 122 22357
Q ss_pred ccEEEEcCC
Q 025672 90 LDILVNAAA 98 (249)
Q Consensus 90 id~vi~~ag 98 (249)
+|+++.+.|
T Consensus 92 ~D~v~d~~G 100 (171)
T d1iz0a2 92 LDLVLEVRG 100 (171)
T ss_dssp EEEEEECSC
T ss_pred ccccccccc
Confidence 999999776
|
| >d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein TM0436 species: Thermotoga maritima [TaxId: 2336]
Probab=97.69 E-value=0.00012 Score=53.72 Aligned_cols=80 Identities=16% Similarity=0.263 Sum_probs=54.4
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh--
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF-- 87 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-- 87 (249)
.|.++||+|+ |+||...+..+...|+ +|+++++++++++.+ +++ |... ++ |.++. +.....+++.+..
T Consensus 28 ~G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a-~~l---Ga~~-vi--~~~~~-~~~~~~~~i~~~~~~ 98 (182)
T d1vj0a2 28 AGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRLKLA-EEI---GADL-TL--NRRET-SVEERRKAIMDITHG 98 (182)
T ss_dssp BTCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHHHHHHH-HHT---TCSE-EE--ETTTS-CHHHHHHHHHHHTTT
T ss_pred CCCEEEEECC-Cccchhheeccccccccccccccccccccccc-ccc---cceE-EE--ecccc-chHHHHHHHHHhhCC
Confidence 5899999997 8999999999999998 799999998877644 333 4332 23 33332 2222233333332
Q ss_pred CCccEEEEcCCC
Q 025672 88 GKLDILVNAAAG 99 (249)
Q Consensus 88 ~~id~vi~~ag~ 99 (249)
..+|++|.+.|.
T Consensus 99 ~g~Dvvid~vG~ 110 (182)
T d1vj0a2 99 RGADFILEATGD 110 (182)
T ss_dssp SCEEEEEECSSC
T ss_pred CCceEEeecCCc
Confidence 259999999984
|
| >d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: CoaB-like family: CoaB-like domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) species: Escherichia coli [TaxId: 562]
Probab=97.65 E-value=0.00011 Score=55.73 Aligned_cols=81 Identities=17% Similarity=0.201 Sum_probs=57.0
Q ss_pred CCCCCcEEEEecCC----------------CchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCC
Q 025672 8 DILKGKVALLTGGG----------------SGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVR 71 (249)
Q Consensus 8 ~~l~~k~~lItGa~----------------~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~ 71 (249)
.+|+|+++|||+|. |..|.++|+++..+|++|+++.-.... .....+..+ .+.
T Consensus 2 ~dl~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g~~~~---------~~p~~~~~~--~~~ 70 (223)
T d1u7za_ 2 NDLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSL---------PTPPFVKRV--DVM 70 (223)
T ss_dssp CTTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCC---------CCCTTEEEE--ECC
T ss_pred cccCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhccccc---------Ccccccccc--eeh
Confidence 47899999999885 789999999999999999987654321 111234444 444
Q ss_pred CHHHHHHHHHHHHHHhCCccEEEEcCCCCCC
Q 025672 72 KREDAVRVVESTINHFGKLDILVNAAAGNFL 102 (249)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~ 102 (249)
..++.... +.+.+...|++|++|++...
T Consensus 71 t~~~m~~~---~~~~~~~~D~~i~aAAvsDf 98 (223)
T d1u7za_ 71 TALEMEAA---VNASVQQQNIFIGCAAVADY 98 (223)
T ss_dssp SHHHHHHH---HHHHGGGCSEEEECCBCCSE
T ss_pred hhHHHHHH---HHhhhccceeEeeeechhhh
Confidence 44554444 44445668999999997654
|
| >d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH species: Lactobacillus confusus [TaxId: 1583]
Probab=97.64 E-value=0.00033 Score=49.41 Aligned_cols=117 Identities=13% Similarity=0.166 Sum_probs=71.6
Q ss_pred cEEEEecCCCchhHHHHHHHHHcCC--eEEEEeCCcchHHHHHHHHHhc----CCCeeEEEccCCCHHHHHHHHHHHHHH
Q 025672 13 KVALLTGGGSGIGFEISLQLGKHGA--AIAIMGRRKTVLRSAVAALHSL----GIPAIGLEGDVRKREDAVRVVESTINH 86 (249)
Q Consensus 13 k~~lItGa~~giG~~~a~~l~~~G~--~v~l~~r~~~~~~~~~~~~~~~----~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 86 (249)
|.+.|+|+ |.+|..+|..|+.+|. +++++|.++++++....++.+. +........ |.++
T Consensus 2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~~---d~~~----------- 66 (146)
T d1hyha1 2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVIN---DWAA----------- 66 (146)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEES---CGGG-----------
T ss_pred CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCccceecc---CHHH-----------
Confidence 66778895 8999999999999985 7999999998877666666532 222233322 3222
Q ss_pred hCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccc
Q 025672 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISAT 157 (249)
Q Consensus 87 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~ 157 (249)
...-|++|.++|..... .+...++-...++.|. .+++.+.+.+.+..+ .+.++++|..
T Consensus 67 l~~adiVVitaG~~~~~--~~~~g~~R~~l~~~N~----~i~~~i~~~i~~~~p-------~aivivvtNP 124 (146)
T d1hyha1 67 LADADVVISTLGNIKLQ--QDNPTGDRFAELKFTS----SMVQSVGTNLKESGF-------HGVLVVISNP 124 (146)
T ss_dssp GTTCSEEEECCSCGGGT--C-------CTTHHHHH----HHHHHHHHHHHHTTC-------CSEEEECSSS
T ss_pred hccccEEEEeccccccc--cccCCccHHHHHHHHH----HHHHHHHHHHhhcCC-------CeEEEEecCc
Confidence 23579999999964311 1011111223344553 456677777766544 3666666664
|
| >d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Toxoplasma gondii [TaxId: 5811]
Probab=97.63 E-value=0.00044 Score=49.21 Aligned_cols=123 Identities=13% Similarity=0.077 Sum_probs=73.0
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhc----CCCeeEEEccCCCHHHHHHHHHH
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSL----GIPAIGLEGDVRKREDAVRVVES 82 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~----~~~~~~~~~Dl~~~~~~~~~~~~ 82 (249)
+.-+.+.+.|+|+ |.+|..+|..|+.++. +++++|.+++.++....++.+. +...... . -++.+ ..
T Consensus 3 ~~~k~~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~-~-~~~~~---~~--- 73 (154)
T d1pzga1 3 LVQRRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVR-A-EYSYE---AA--- 73 (154)
T ss_dssp CCSCCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEE-E-ECSHH---HH---
T ss_pred cccCCCcEEEECC-CHHHHHHHHHHHhCCCceEEEEEeccccchhHHHHHhhhccccCCeeEEe-c-cCchh---hh---
Confidence 4446788899997 9999999999999885 8999999998877776666532 1111111 1 12211 11
Q ss_pred HHHHhCCccEEEEcCCCCCCCC--CCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccc
Q 025672 83 TINHFGKLDILVNAAAGNFLVP--AEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISAT 157 (249)
Q Consensus 83 ~~~~~~~id~vi~~ag~~~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~ 157 (249)
...-|+||.++|...... -...+. ...+..|.. +++.+.+.+.+..+ .+.++++|..
T Consensus 74 ----~~~adiVvitag~~~~~g~~~~~~tR---~~l~~~n~~----iv~~i~~~i~~~~p-------~aiviivsNP 132 (154)
T d1pzga1 74 ----LTGADCVIVTAGLTKVPGKPDSEWSR---NDLLPFNSK----IIREIGQNIKKYCP-------KTFIIVVTNP 132 (154)
T ss_dssp ----HTTCSEEEECCSCSSCTTCCGGGCCG---GGGHHHHHH----HHHHHHHHHHHHCT-------TCEEEECCSS
T ss_pred ----hcCCCeEEEecccccCCCCCCcccch---hhhhhhhHH----HHHHHHHHHHhcCC-------CcEEEEeCCc
Confidence 135799999998643211 011122 333445544 44555555555443 3666666653
|
| >d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn bsu222 species: Bacillus subtilis [TaxId: 1423]
Probab=97.58 E-value=2.6e-05 Score=54.40 Aligned_cols=73 Identities=11% Similarity=0.158 Sum_probs=55.4
Q ss_pred cEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCccE
Q 025672 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI 92 (249)
Q Consensus 13 k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ 92 (249)
|.++|.|. |-+|+.+++.|.+.|+.|++++.+++..+++. ..+ ...+.+|.++++.++++- ....|.
T Consensus 1 k~~iIiG~-G~~G~~la~~L~~~g~~vvvid~d~~~~~~~~----~~~--~~~~~gd~~~~~~l~~a~------i~~a~~ 67 (134)
T d2hmva1 1 KQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYA----SYA--THAVIANATEENELLSLG------IRNFEY 67 (134)
T ss_dssp CCEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHHTT----TTC--SEEEECCTTCTTHHHHHT------GGGCSE
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCeEEEecCcHHHHHHHH----HhC--CcceeeecccchhhhccC------CccccE
Confidence 55777766 79999999999999999999999988766643 222 346678999998877651 124688
Q ss_pred EEEcCC
Q 025672 93 LVNAAA 98 (249)
Q Consensus 93 vi~~ag 98 (249)
+|...+
T Consensus 68 vi~~~~ 73 (134)
T d2hmva1 68 VIVAIG 73 (134)
T ss_dssp EEECCC
T ss_pred EEEEcC
Confidence 777665
|
| >d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Archaeon Haloarcula marismortui [TaxId: 2238]
Probab=97.58 E-value=0.0017 Score=45.31 Aligned_cols=113 Identities=12% Similarity=0.074 Sum_probs=71.5
Q ss_pred EEEEecCCCchhHHHHHHHHHcCC--eEEEEeCC--cchHHHHHHHHHh---cCCCeeEEEccCCCHHHHHHHHHHHHHH
Q 025672 14 VALLTGGGSGIGFEISLQLGKHGA--AIAIMGRR--KTVLRSAVAALHS---LGIPAIGLEGDVRKREDAVRVVESTINH 86 (249)
Q Consensus 14 ~~lItGa~~giG~~~a~~l~~~G~--~v~l~~r~--~~~~~~~~~~~~~---~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 86 (249)
.+.|+|++|.+|..+|..|+.+|. +++++|.+ ++..+....++.+ ......+...| .++
T Consensus 2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~i~~~~---~~~----------- 67 (142)
T d1o6za1 2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGG---YED----------- 67 (142)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECC---GGG-----------
T ss_pred eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcccccCCceEeeCC---HHH-----------
Confidence 578999999999999999999986 69999964 3334444444543 23334443333 222
Q ss_pred hCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccc
Q 025672 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISAT 157 (249)
Q Consensus 87 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~ 157 (249)
...-|++|..||... ++ ..+ -.+.++.|. .+++.+.+.+.+..+ .+.++.+|..
T Consensus 68 ~~~aDiVvitaG~~~-~~--g~~---R~dl~~~N~----~I~~~i~~~i~~~~p-------~~i~ivvtNP 121 (142)
T d1o6za1 68 TAGSDVVVITAGIPR-QP--GQT---RIDLAGDNA----PIMEDIQSSLDEHND-------DYISLTTSNP 121 (142)
T ss_dssp GTTCSEEEECCCCCC-CT--TCC---HHHHHHHHH----HHHHHHHHHHHTTCS-------CCEEEECCSS
T ss_pred hhhcCEEEEeccccc-cc--CCc---hhhHHHHHH----HHHHHHHHHHHhcCC-------CceEEEecCh
Confidence 235799999999532 22 122 344556664 456667777766654 3667777653
|
| >d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=97.56 E-value=0.0002 Score=50.44 Aligned_cols=116 Identities=17% Similarity=0.158 Sum_probs=69.0
Q ss_pred EEEEecCCCchhHHHHHHHHHcCC--eEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCcc
Q 025672 14 VALLTGGGSGIGFEISLQLGKHGA--AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD 91 (249)
Q Consensus 14 ~~lItGa~~giG~~~a~~l~~~G~--~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 91 (249)
.+.|+||+|.+|.++|..|+.+|. +++++|.++.+.+ ..++.+..... ....-+. ..+..+.+ ..-|
T Consensus 2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~--a~Dl~~~~~~~-~~~~~~~-~~~~~~~~-------~~aD 70 (144)
T d1mlda1 2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGV--AADLSHIETRA-TVKGYLG-PEQLPDCL-------KGCD 70 (144)
T ss_dssp EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHH--HHHHTTSSSSC-EEEEEES-GGGHHHHH-------TTCS
T ss_pred eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchh--hHHHhhhhhhc-CCCeEEc-CCChHHHh-------CCCC
Confidence 578999999999999999999986 6999998765433 33444322211 1111122 22322222 3579
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccc
Q 025672 92 ILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISAT 157 (249)
Q Consensus 92 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~ 157 (249)
++|..+|... .+ ..+. ...++.|+.-. +.+.+.+.+..+ .+.|+++|..
T Consensus 71 ivVitag~~~-~~--g~sR---~~ll~~N~~i~----~~i~~~i~~~~p-------~~iiivvtNP 119 (144)
T d1mlda1 71 VVVIPAGVPR-KP--GMTR---DDLFNTNATIV----ATLTAACAQHCP-------DAMICIISNP 119 (144)
T ss_dssp EEEECCSCCC-CT--TCCG---GGGHHHHHHHH----HHHHHHHHHHCT-------TSEEEECSSC
T ss_pred EEEECCCcCC-CC--CCCc---chHHHHHHHHH----HHHHHHHHhcCC-------CeEEEEecCc
Confidence 9999999632 22 1232 34466666544 445555555433 3667777764
|
| >d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Clostridium thermocellum [TaxId: 1515]
Probab=97.56 E-value=0.00021 Score=50.24 Aligned_cols=113 Identities=12% Similarity=0.130 Sum_probs=66.4
Q ss_pred cEEEEecCCCchhHHHHHHHHHcCC--eEEEEeCCcchHHHHHHHHHhcCC---CeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 13 KVALLTGGGSGIGFEISLQLGKHGA--AIAIMGRRKTVLRSAVAALHSLGI---PAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 13 k~~lItGa~~giG~~~a~~l~~~G~--~v~l~~r~~~~~~~~~~~~~~~~~---~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
+.+.|+|+ |.+|..++..|+.+|. +++++|++++..+....++.+... ....... +. +..
T Consensus 2 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~---~~-----------~~~ 66 (142)
T d1y6ja1 2 SKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAG---DY-----------SDV 66 (142)
T ss_dssp CCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC-----CG-----------GGG
T ss_pred CeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeEeeC---cH-----------HHh
Confidence 34667787 9999999999999986 799999999877776667764321 2222211 11 123
Q ss_pred CCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccc
Q 025672 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISAT 157 (249)
Q Consensus 88 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~ 157 (249)
..-|++|..+|.... + ..+ -...++.|+ .+++.+.+.+.+..+ .+.++++|..
T Consensus 67 ~~adivvitag~~~~-~--~~~---r~~l~~~N~----~i~~~i~~~i~~~~p-------~ai~ivvtNP 119 (142)
T d1y6ja1 67 KDCDVIVVTAGANRK-P--GET---RLDLAKKNV----MIAKEVTQNIMKYYN-------HGVILVVSNP 119 (142)
T ss_dssp TTCSEEEECCCC---------C---HHHHHHHHH----HHHHHHHHHHHHHCC-------SCEEEECSSS
T ss_pred CCCceEEEecccccC-c--Ccc---hhHHhhHHH----HHHHHHHHHhhccCC-------CceEEEecCh
Confidence 457999999985431 1 112 234455555 455556666665543 3666666653
|
| >d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.51 E-value=0.00052 Score=49.58 Aligned_cols=79 Identities=20% Similarity=0.285 Sum_probs=55.5
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhC-
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG- 88 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~- 88 (249)
.|.+++|.|+ |++|...+..+...|+ +|+++++++++++.. +++ |... ++..+-.+..+.... +...++
T Consensus 26 ~gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a-~~~---Ga~~-~~~~~~~~~~~~~~~---~~~~~g~ 96 (171)
T d1pl8a2 26 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKA-KEI---GADL-VLQISKESPQEIARK---VEGQLGC 96 (171)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH-HHT---TCSE-EEECSSCCHHHHHHH---HHHHHTS
T ss_pred CCCEEEEECC-CccHHHHHHHHHHcCCceEEeccCCHHHHHHH-HHh---CCcc-ccccccccccccccc---ccccCCC
Confidence 4778999986 9999999999999999 799999998877643 333 3332 333333444444443 333343
Q ss_pred CccEEEEcCC
Q 025672 89 KLDILVNAAA 98 (249)
Q Consensus 89 ~id~vi~~ag 98 (249)
.+|++|.+.|
T Consensus 97 g~Dvvid~~G 106 (171)
T d1pl8a2 97 KPEVTIECTG 106 (171)
T ss_dssp CCSEEEECSC
T ss_pred CceEEEeccC
Confidence 7999999998
|
| >d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: MJ0490, lactate/malate dehydrogenase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=97.47 E-value=0.0016 Score=45.64 Aligned_cols=105 Identities=11% Similarity=0.093 Sum_probs=63.0
Q ss_pred EEEEecCCCchhHHHHHHHHHcCC--eEEEEeCCcc--hHHHHHHHHHhc----CCCeeEEEccCCCHHHHHHHHHHHHH
Q 025672 14 VALLTGGGSGIGFEISLQLGKHGA--AIAIMGRRKT--VLRSAVAALHSL----GIPAIGLEGDVRKREDAVRVVESTIN 85 (249)
Q Consensus 14 ~~lItGa~~giG~~~a~~l~~~G~--~v~l~~r~~~--~~~~~~~~~~~~----~~~~~~~~~Dl~~~~~~~~~~~~~~~ 85 (249)
.+.|+||+|.+|..+|..|+.+|. ++++++++++ +++....++.+. ...+.....--.|. +
T Consensus 2 KV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~d~-----------~ 70 (145)
T d1hyea1 2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDENL-----------R 70 (145)
T ss_dssp EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTCG-----------G
T ss_pred EEEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccchhcccccccCCccccCCcchH-----------H
Confidence 488999999999999999999994 8999998864 344455555431 22222211111122 1
Q ss_pred HhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC
Q 025672 86 HFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGG 139 (249)
Q Consensus 86 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~ 139 (249)
.+..-|++|.+||..... ..+. ...++.|.. +++.+.+.+.+..
T Consensus 71 ~l~~aDvVVitAG~~~~~---g~sR---~dl~~~Na~----iv~~i~~~i~~~~ 114 (145)
T d1hyea1 71 IIDESDVVIITSGVPRKE---GMSR---MDLAKTNAK----IVGKYAKKIAEIC 114 (145)
T ss_dssp GGTTCSEEEECCSCCCCT---TCCH---HHHHHHHHH----HHHHHHHHHHHHC
T ss_pred HhccceEEEEecccccCC---CCCh---hhhhhhhHH----HHHHHHHHHhccC
Confidence 224579999999964321 1233 345566654 4555555555543
|
| >d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=97.45 E-value=0.00022 Score=51.61 Aligned_cols=80 Identities=15% Similarity=0.195 Sum_probs=55.4
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCC
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK 89 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 89 (249)
.+.+++|+|++|++|..++..+...|. +|+++++++++.+.+.+ + |.. .++ |-++++-.+...+.. .-+.
T Consensus 27 ~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~~-~---Ga~-~~i--~~~~~~~~~~~~~~~--~~~~ 97 (170)
T d1jvba2 27 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKR-A---GAD-YVI--NASMQDPLAEIRRIT--ESKG 97 (170)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHH-H---TCS-EEE--ETTTSCHHHHHHHHT--TTSC
T ss_pred CCCEEEEEeccccceeeeeecccccccccccccccchhhHHHHHH-c---CCc-eee--ccCCcCHHHHHHHHh--hccc
Confidence 478999999999999999999999996 78899998876555442 3 433 223 444444444443222 1136
Q ss_pred ccEEEEcCCC
Q 025672 90 LDILVNAAAG 99 (249)
Q Consensus 90 id~vi~~ag~ 99 (249)
+|++|.++|.
T Consensus 98 ~d~vid~~g~ 107 (170)
T d1jvba2 98 VDAVIDLNNS 107 (170)
T ss_dssp EEEEEESCCC
T ss_pred chhhhccccc
Confidence 9999999883
|
| >d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]
Probab=97.43 E-value=0.0039 Score=43.49 Aligned_cols=112 Identities=14% Similarity=0.111 Sum_probs=69.1
Q ss_pred EEEEecCCCchhHHHHHHHHHcCC--eEEEEeCCcchHHHHHHHHHhc---CCCeeEEEccCCCHHHHHHHHHHHHHHhC
Q 025672 14 VALLTGGGSGIGFEISLQLGKHGA--AIAIMGRRKTVLRSAVAALHSL---GIPAIGLEGDVRKREDAVRVVESTINHFG 88 (249)
Q Consensus 14 ~~lItGa~~giG~~~a~~l~~~G~--~v~l~~r~~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 88 (249)
.+.|+|+ |.+|..+|..|+.+|. +++++|++++..+....++.+. .....+... .+.++ ..
T Consensus 3 Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i~~~--~~~~~-----------~~ 68 (143)
T d1llda1 3 KLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGS--DDPEI-----------CR 68 (143)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEE--SCGGG-----------GT
T ss_pred EEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccccCCCceeecC--CCHHH-----------hh
Confidence 4677796 9999999999999986 7999999998877666666543 112222211 11111 12
Q ss_pred CccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecc
Q 025672 89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISA 156 (249)
Q Consensus 89 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss 156 (249)
.-|++|..+|... ++ ..+. .+.+..|. .+++.+.+.+.+..+ .+.++++|.
T Consensus 69 daDvVVitaG~~~-~~--g~~R---~dl~~~N~----~i~~~i~~~i~~~~p-------~ai~ivvtN 119 (143)
T d1llda1 69 DADMVVITAGPRQ-KP--GQSR---LELVGATV----NILKAIMPNLVKVAP-------NAIYMLITN 119 (143)
T ss_dssp TCSEEEECCCCCC-CT--TCCH---HHHHHHHH----HHHHHHHHHHHHHCT-------TSEEEECCS
T ss_pred CCcEEEEeccccc-CC--CCch---hhhhhhhH----HHHHHHHHHHHhhCC-------CeEEEEeCC
Confidence 4699999999542 11 2233 33455665 455555566655543 355666664
|
| >d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=97.42 E-value=0.0029 Score=43.97 Aligned_cols=111 Identities=15% Similarity=0.111 Sum_probs=70.2
Q ss_pred EEEEecCCCchhHHHHHHHHHcCC--eEEEEeCCcchHHHHHHHHHhc---CCCeeEEEccCCCHHHHHHHHHHHHHHhC
Q 025672 14 VALLTGGGSGIGFEISLQLGKHGA--AIAIMGRRKTVLRSAVAALHSL---GIPAIGLEGDVRKREDAVRVVESTINHFG 88 (249)
Q Consensus 14 ~~lItGa~~giG~~~a~~l~~~G~--~v~l~~r~~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 88 (249)
.+.|+|+ |.+|..++..|+.+|. +++++|.++++++....++.+. .........| .++ +.
T Consensus 2 KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~~~---~~~-----------~~ 66 (140)
T d1a5za1 2 KIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGD---YAD-----------LK 66 (140)
T ss_dssp EEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECC---GGG-----------GT
T ss_pred EEEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccccccccCCc---HHH-----------hc
Confidence 4677796 8999999999999885 7999999988877666665432 2233333322 222 23
Q ss_pred CccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecc
Q 025672 89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISA 156 (249)
Q Consensus 89 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss 156 (249)
.-|++|.++|..... ..+. .+.+..|. .+++.+.+.+.+..+ .+.++++|.
T Consensus 67 ~adivvitag~~~~~---g~~r---~dl~~~N~----~I~~~i~~~i~~~~p-------~aivivvtN 117 (140)
T d1a5za1 67 GSDVVIVAAGVPQKP---GETR---LQLLGRNA----RVMKEIARNVSKYAP-------DSIVIVVTN 117 (140)
T ss_dssp TCSEEEECCCCCCCS---SCCH---HHHHHHHH----HHHHHHHHHHHHHCT-------TCEEEECSS
T ss_pred CCCEEEEecccccCC---Ccch---hhhhcccc----chHHHHHHHHHhcCC-------CcEEEEeCC
Confidence 579999999864321 1222 33344553 456666777766544 355666664
|
| >d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Chloroflexus aurantiacus [TaxId: 1108]
Probab=97.42 E-value=0.0014 Score=45.77 Aligned_cols=113 Identities=12% Similarity=0.107 Sum_probs=68.5
Q ss_pred cEEEEecCCCchhHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhc----CCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 13 KVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSL----GIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 13 k~~lItGa~~giG~~~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~----~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
|.+.|+|+ |.+|..+|..|+.++. +++++|.+++..+....++.+. +....+..+ .|.++ .
T Consensus 2 ~KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~--~d~~~-----------~ 67 (142)
T d1uxja1 2 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGT--NNYAD-----------T 67 (142)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE--SCGGG-----------G
T ss_pred CeEEEECC-CHHHHHHHHHHHhCCcceEEEEeeccccchhHHHHhhccccccCCCCEEEec--CcHHH-----------h
Confidence 56777786 9999999999999886 8999999988777666666432 122222211 11111 2
Q ss_pred CCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecc
Q 025672 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISA 156 (249)
Q Consensus 88 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss 156 (249)
..-|++|.+||..... .++-.+.++.|+ .+++.+.+.+.+..+ .+.++++|.
T Consensus 68 ~~advvvitag~~~~~------~~~r~dl~~~N~----~i~~~i~~~i~k~~p-------~aivivvtN 119 (142)
T d1uxja1 68 ANSDVIVVTSGAPRKP------GMSREDLIKVNA----DITRACISQAAPLSP-------NAVIIMVNN 119 (142)
T ss_dssp TTCSEEEECCSCC---------------CHHHHH----HHHHHHHHHHGGGCT-------TCEEEECSS
T ss_pred cCCCEEEEeeeccCCc------CcchhHHHhHHH----HHHHHHHHHHhccCC-------CceEEEeCC
Confidence 3579999999964321 112233445554 467777777777654 355666554
|
| >d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=97.42 E-value=0.0037 Score=44.00 Aligned_cols=119 Identities=11% Similarity=0.059 Sum_probs=72.1
Q ss_pred cEEEEecCCCchhHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhc----CCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 13 KVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSL----GIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 13 k~~lItGa~~giG~~~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~----~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
..+.|+|+ |.+|..+|..|..++. +++|+|++++..+....++.+. +....+...| +. +..
T Consensus 4 ~KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~--~~-----------~~~ 69 (150)
T d1t2da1 4 AKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSN--TY-----------DDL 69 (150)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEEC--CG-----------GGG
T ss_pred CeEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhhhccccCCCcEEEecc--cc-----------ccc
Confidence 45778895 8999999998888886 7999999998877776666532 2333333322 11 123
Q ss_pred CCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccc
Q 025672 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISAT 157 (249)
Q Consensus 88 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~ 157 (249)
..-|++|.++|........+.+. +-...+..|. .+++.+.+.+.+..+ .+.++++|..
T Consensus 70 ~~advvvitag~~~~~g~~~~~~-~R~~l~~~N~----~iv~~i~~~i~~~~p-------~aivivvtNP 127 (150)
T d1t2da1 70 AGADVVIVTAGFTKAPGKSDKEW-NRDDLLPLNN----KIMIEIGGHIKKNCP-------NAFIIVVTNP 127 (150)
T ss_dssp TTCSEEEECCSCSSCTTCCSTTC-CGGGGHHHHH----HHHHHHHHHHHHHCT-------TSEEEECSSS
T ss_pred CCCcEEEEecccccCCCCCcccc-chhHHHHHHH----HHHHHHHHHHHhcCC-------CeEEEEecCc
Confidence 45799999999643211111111 1233455554 455555666655543 3656666664
|
| >d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]
Probab=97.41 E-value=0.003 Score=45.66 Aligned_cols=107 Identities=13% Similarity=0.096 Sum_probs=61.8
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcC---C----eEEEEeCCc--chHHHHHHHHHhcCC-CeeEEEccCCCHHHHHHHH
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHG---A----AIAIMGRRK--TVLRSAVAALHSLGI-PAIGLEGDVRKREDAVRVV 80 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G---~----~v~l~~r~~--~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~~~~~~ 80 (249)
+...|.||||+|.||..++..|++.. . .+.+++.+. +.++.+.-++.+... ....+.. -++.
T Consensus 23 ~~~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~a~~~~~~~~~-~~~~------- 94 (175)
T d7mdha1 23 KLVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSI-GIDP------- 94 (175)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEE-ESCH-------
T ss_pred CCcEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhcccccccccCccc-cccc-------
Confidence 35579999999999999999999753 2 355556544 334555555544321 2222111 1221
Q ss_pred HHHHHHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc
Q 025672 81 ESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKG 138 (249)
Q Consensus 81 ~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 138 (249)
.+.+...|++|..+|.... ...+. .+.++.|. .+++...+.+.+.
T Consensus 95 ---~~~~~~aDvVvi~ag~~rk---pg~tR---~Dll~~N~----~I~k~~~~~i~~~ 139 (175)
T d7mdha1 95 ---YEVFEDVDWALLIGAKPRG---PGMER---AALLDING----QIFADQGKALNAV 139 (175)
T ss_dssp ---HHHTTTCSEEEECCCCCCC---TTCCH---HHHHHHHH----HHHHHHHHHHHHH
T ss_pred ---hhhccCCceEEEeeccCCC---CCCcH---HHHHHHHH----HHHHHHHHHHHhh
Confidence 1234578999999986421 12333 44566664 4455556666553
|
| >d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative zinc-binding alcohol dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.38 E-value=0.0003 Score=51.81 Aligned_cols=78 Identities=12% Similarity=0.102 Sum_probs=52.0
Q ss_pred CcEEEEecCCCchhHHHHHHHHHcCCeE-EEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCc
Q 025672 12 GKVALLTGGGSGIGFEISLQLGKHGAAI-AIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (249)
Q Consensus 12 ~k~~lItGa~~giG~~~a~~l~~~G~~v-~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 90 (249)
+.+|||+||+||+|...+......|+++ +.++.++++...++.++ +... + .|..+++.. +.+.++. -..+
T Consensus 31 ~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~---gad~-v--i~~~~~~~~-~~~~~~~--~~Gv 101 (187)
T d1vj1a2 31 NQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSEL---GFDA-A--VNYKTGNVA-EQLREAC--PGGV 101 (187)
T ss_dssp CCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHS---CCSE-E--EETTSSCHH-HHHHHHC--TTCE
T ss_pred CCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcc---cceE-E--eeccchhHH-HHHHHHh--ccCc
Confidence 4799999999999999998888899964 44566666655555554 3332 2 255554433 3333332 1369
Q ss_pred cEEEEcCC
Q 025672 91 DILVNAAA 98 (249)
Q Consensus 91 d~vi~~ag 98 (249)
|+++.+.|
T Consensus 102 Dvv~D~vG 109 (187)
T d1vj1a2 102 DVYFDNVG 109 (187)
T ss_dssp EEEEESSC
T ss_pred eEEEecCC
Confidence 99999988
|
| >d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Cinnamyl alcohol dehydrogenase, ADH6 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=97.35 E-value=0.00083 Score=48.33 Aligned_cols=76 Identities=22% Similarity=0.214 Sum_probs=51.9
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCc
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 90 (249)
.|.+++|.|+ |++|...+..+...|++|+++++++++++... ++ |....+ |-.+..+.. .+..+..
T Consensus 27 ~g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k~~~a~-~l---Ga~~~i---~~~~~~~~~------~~~~~~~ 92 (168)
T d1piwa2 27 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAM-KM---GADHYI---ATLEEGDWG------EKYFDTF 92 (168)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHH-HH---TCSEEE---EGGGTSCHH------HHSCSCE
T ss_pred CCCEEEEECC-CCcchhHHHHhhhccccccccccchhHHHHhh-cc---CCcEEe---eccchHHHH------Hhhhccc
Confidence 5889999987 89999988888889999999999988776543 33 433222 222221111 1223578
Q ss_pred cEEEEcCCCC
Q 025672 91 DILVNAAAGN 100 (249)
Q Consensus 91 d~vi~~ag~~ 100 (249)
|.++.+.+..
T Consensus 93 d~vi~~~~~~ 102 (168)
T d1piwa2 93 DLIVVCASSL 102 (168)
T ss_dssp EEEEECCSCS
T ss_pred ceEEEEecCC
Confidence 9999988753
|
| >d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=97.31 E-value=0.0021 Score=45.48 Aligned_cols=106 Identities=14% Similarity=0.187 Sum_probs=61.8
Q ss_pred CcEEEEecCCCchhHHHHHHHHHcCC---------eEEEEeCCcchHHHHHHHHHhcC-CCeeEEEccCCCHHHHHHHHH
Q 025672 12 GKVALLTGGGSGIGFEISLQLGKHGA---------AIAIMGRRKTVLRSAVAALHSLG-IPAIGLEGDVRKREDAVRVVE 81 (249)
Q Consensus 12 ~k~~lItGa~~giG~~~a~~l~~~G~---------~v~l~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~ 81 (249)
...+.|+||+|.+|..++..|+..+. +++..+++.+.++....++.... .....+...-.+.
T Consensus 4 p~KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 75 (154)
T d1y7ta1 4 PVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLEATDDPK-------- 75 (154)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHH--------
T ss_pred CCEEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhccccccccccccCCchh--------
Confidence 34799999999999999999998763 23334445555555555554432 2233333332221
Q ss_pred HHHHHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc
Q 025672 82 STINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKG 138 (249)
Q Consensus 82 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 138 (249)
+.+...|++|..+|.... ...+.. +.++.|+. +++.+.+.+.+.
T Consensus 76 ---~~~~~advViitaG~~~~---pg~~r~---dl~~~N~~----i~~~~~~~i~k~ 119 (154)
T d1y7ta1 76 ---VAFKDADYALLVGAAPRK---AGMERR---DLLQVNGK----IFTEQGRALAEV 119 (154)
T ss_dssp ---HHTTTCSEEEECCCCCCC---TTCCHH---HHHHHHHH----HHHHHHHHHHHH
T ss_pred ---hhcccccEEEeecCcCCC---CCCcHH---HHHHHHHH----HHHHHHHHHHHh
Confidence 223468999999996432 223433 33555544 455555555553
|
| >d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhfP species: Bacillus subtilis [TaxId: 1423]
Probab=97.27 E-value=0.00015 Score=52.54 Aligned_cols=76 Identities=22% Similarity=0.273 Sum_probs=51.7
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHH--hC
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH--FG 88 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~--~~ 88 (249)
++.+|||+||+||+|...+......|++|+.+.+++++.+.+.+ .|....+ | .++ ...+..+. -+
T Consensus 23 ~~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~~~~----lGad~vi---~---~~~---~~~~~~~~~~~~ 89 (167)
T d1tt7a2 23 EKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQ----LGASEVI---S---RED---VYDGTLKALSKQ 89 (167)
T ss_dssp GGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHH----HTCSEEE---E---HHH---HCSSCCCSSCCC
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHHHHHh----hcccceE---e---ccc---hhchhhhcccCC
Confidence 46689999999999999998888899999999999887665432 2433322 1 111 11111111 24
Q ss_pred CccEEEEcCCC
Q 025672 89 KLDILVNAAAG 99 (249)
Q Consensus 89 ~id~vi~~ag~ 99 (249)
++|+++.+.|.
T Consensus 90 gvd~vid~vgg 100 (167)
T d1tt7a2 90 QWQGAVDPVGG 100 (167)
T ss_dssp CEEEEEESCCT
T ss_pred CceEEEecCcH
Confidence 79999999883
|
| >d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Haemophilus influenzae [TaxId: 727]
Probab=97.26 E-value=0.00072 Score=47.77 Aligned_cols=84 Identities=12% Similarity=0.084 Sum_probs=56.0
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
+..+=|++.|+||.|.+|..+|+.|.+.|++|.+.+|+........ ..+....+. ......+...+.++....
T Consensus 5 ~~~~~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~~~~~~----~~~~~~v~~---~~~~~~~~~v~~~~~~~~ 77 (152)
T d2pv7a2 5 INSDIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAVAESI----LANADVVIV---SVPINLTLETIERLKPYL 77 (152)
T ss_dssp SCTTCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGGHHHH----HTTCSEEEE---CSCGGGHHHHHHHHGGGC
T ss_pred cCCCCCeEEEEcCCCHHHHHHHHHHHHcCCCcEecccccccccchh----hhhcccccc---ccchhhheeeeecccccc
Confidence 3344578999999999999999999999999999999876544322 123334443 333456666666665544
Q ss_pred CCccEEEEcCC
Q 025672 88 GKLDILVNAAA 98 (249)
Q Consensus 88 ~~id~vi~~ag 98 (249)
.+=.+++....
T Consensus 78 ~~~~iiiD~~S 88 (152)
T d2pv7a2 78 TENMLLADLTS 88 (152)
T ss_dssp CTTSEEEECCS
T ss_pred cCCceEEEecc
Confidence 33335555544
|
| >d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=97.25 E-value=0.001 Score=47.59 Aligned_cols=76 Identities=17% Similarity=0.236 Sum_probs=51.6
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCc
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 90 (249)
.|.+++|.|+ |++|...+..+...|++|+.+++++++++... +.|... ++ |.++.+..+.+.+ ..+..
T Consensus 27 ~g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~~~~~~a~----~~Ga~~-~i--~~~~~~~~~~~~~----~~~g~ 94 (166)
T d1llua2 27 PGQWVAISGI-GGLGHVAVQYARAMGLHVAAIDIDDAKLELAR----KLGASL-TV--NARQEDPVEAIQR----DIGGA 94 (166)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH----HTTCSE-EE--ETTTSCHHHHHHH----HHSSE
T ss_pred CCCEEEEeec-cccHHHHHHHHHHcCCccceecchhhHHHhhh----ccCccc-cc--cccchhHHHHHHH----hhcCC
Confidence 4789999886 89999999988889999999999988765433 334432 22 5555554444432 23456
Q ss_pred cEEEEcCC
Q 025672 91 DILVNAAA 98 (249)
Q Consensus 91 d~vi~~ag 98 (249)
+.+|.+++
T Consensus 95 ~~~i~~~~ 102 (166)
T d1llua2 95 HGVLVTAV 102 (166)
T ss_dssp EEEEECCS
T ss_pred cccccccc
Confidence 66666655
|
| >d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Bacterial secondary alcohol dehydrogenase species: Clostridium beijerinckii [TaxId: 1520]
Probab=97.24 E-value=0.00027 Score=51.44 Aligned_cols=79 Identities=20% Similarity=0.176 Sum_probs=52.8
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCC
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK 89 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 89 (249)
.|.+++|.|+ |+||...+..+...|+ +|+++++++++++.. +++ |.. ++ +|..+++..+.+.+.. . ...
T Consensus 27 ~g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a-~~l---Ga~-~~--i~~~~~~~~~~v~~~t-~-g~G 96 (174)
T d1jqba2 27 MGSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPICVEAA-KFY---GAT-DI--LNYKNGHIEDQVMKLT-N-GKG 96 (174)
T ss_dssp TTCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHHHHHHH-HHH---TCS-EE--ECGGGSCHHHHHHHHT-T-TSC
T ss_pred CCCEEEEEcC-CcchhhhhhhhhcccccccccccchhhhHHHH-Hhh---Ccc-cc--ccccchhHHHHHHHHh-h-ccC
Confidence 4788999986 8999999998888998 699999988775544 334 332 22 2554433333332221 1 125
Q ss_pred ccEEEEcCCC
Q 025672 90 LDILVNAAAG 99 (249)
Q Consensus 90 id~vi~~ag~ 99 (249)
+|++|.++|.
T Consensus 97 ~D~vid~~g~ 106 (174)
T d1jqba2 97 VDRVIMAGGG 106 (174)
T ss_dssp EEEEEECSSC
T ss_pred cceEEEccCC
Confidence 9999999984
|
| >d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Rck domain from putative potassium channel Kch species: Escherichia coli [TaxId: 562]
Probab=97.22 E-value=0.00093 Score=47.25 Aligned_cols=76 Identities=12% Similarity=0.104 Sum_probs=59.2
Q ss_pred EEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCccEE
Q 025672 14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDIL 93 (249)
Q Consensus 14 ~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~v 93 (249)
.++|.|. +.+|+.+++.|.++|.++++++.+++......++... ..+.++..|.++++.++++- ....|.+
T Consensus 5 HiII~G~-g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~~--~~~~vi~Gd~~d~~~L~~a~------i~~a~~v 75 (153)
T d1id1a_ 5 HFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLG--DNADVIPGDSNDSSVLKKAG------IDRCRAI 75 (153)
T ss_dssp CEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHC--TTCEEEESCTTSHHHHHHHT------TTTCSEE
T ss_pred EEEEECC-CHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhhc--CCcEEEEccCcchHHHHHhc------cccCCEE
Confidence 4677776 6999999999999999999999988766655555543 46788999999998877662 2357888
Q ss_pred EEcCC
Q 025672 94 VNAAA 98 (249)
Q Consensus 94 i~~ag 98 (249)
|....
T Consensus 76 i~~~~ 80 (153)
T d1id1a_ 76 LALSD 80 (153)
T ss_dssp EECSS
T ss_pred EEccc
Confidence 87654
|
| >d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=97.21 E-value=0.0034 Score=43.93 Aligned_cols=115 Identities=12% Similarity=0.137 Sum_probs=68.4
Q ss_pred EEEEecCCCchhHHHHHHHHHc-C--CeEEEEeCCcchHHHHHHHHHhcCCCeeE-EEccCCCHHHHHHHHHHHHHHhCC
Q 025672 14 VALLTGGGSGIGFEISLQLGKH-G--AAIAIMGRRKTVLRSAVAALHSLGIPAIG-LEGDVRKREDAVRVVESTINHFGK 89 (249)
Q Consensus 14 ~~lItGa~~giG~~~a~~l~~~-G--~~v~l~~r~~~~~~~~~~~~~~~~~~~~~-~~~Dl~~~~~~~~~~~~~~~~~~~ 89 (249)
.+.|+|++|.+|.++|..|+.+ + .++++.|.++ ..+....++.+....... ....-.+.++ + ..
T Consensus 2 KV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~-~~~g~a~Dl~h~~~~~~~~~~~~~~~~~~---~--------~~ 69 (145)
T d2cmda1 2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHIPTAVKIKGFSGEDATPA---L--------EG 69 (145)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSST-THHHHHHHHHTSCSSCEEEEECSSCCHHH---H--------TT
T ss_pred EEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccc-cchhHHHHHHCCccccCCcEEEcCCCccc---c--------CC
Confidence 5789999999999999988754 4 4799999864 455555566554322221 1122222222 1 24
Q ss_pred ccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccc
Q 025672 90 LDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISAT 157 (249)
Q Consensus 90 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~ 157 (249)
-|++|.++|.... + ..+. .+.++.|.. +++.+.+.+.+..+ .+.|+++|..
T Consensus 70 aDvvvitaG~~~k-~--g~~R---~dl~~~N~~----i~~~v~~~i~~~~p-------~aivivvtNP 120 (145)
T d2cmda1 70 ADVVLISAGVRRK-P--GMDR---SDLFNVNAG----IVKNLVQQVAKTCP-------KACIGIITNP 120 (145)
T ss_dssp CSEEEECCSCCCC-T--TCCG---GGGHHHHHH----HHHHHHHHHHHHCT-------TSEEEECSSS
T ss_pred CCEEEECCCccCC-C--Ccch---hhHHHHHHH----HHHHHHHHHHhhCC-------CcEEEEccCC
Confidence 6999999996432 1 1222 344666654 44445555555433 3667777764
|
| >d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD species: Escherichia coli [TaxId: 562]
Probab=97.20 E-value=0.00018 Score=46.69 Aligned_cols=38 Identities=21% Similarity=0.196 Sum_probs=34.2
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcc
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT 47 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~ 47 (249)
++++|+++|.|. |..|.++|+.|.++|++|++.|.+..
T Consensus 2 ~~~~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~ 39 (93)
T d2jfga1 2 DYQGKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMT 39 (93)
T ss_dssp CCTTCCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSS
T ss_pred CcCCCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcC
Confidence 689999999988 57899999999999999999998654
|
| >d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: 6-phosphogluconate dehydrogenase species: Sheep (Ovis orientalis aries) [TaxId: 9940]
Probab=97.20 E-value=0.0019 Score=46.77 Aligned_cols=85 Identities=15% Similarity=0.142 Sum_probs=62.6
Q ss_pred cEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHH---------------HhcCCCeeEEEccCCCHHHHH
Q 025672 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAAL---------------HSLGIPAIGLEGDVRKREDAV 77 (249)
Q Consensus 13 k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~---------------~~~~~~~~~~~~Dl~~~~~~~ 77 (249)
..+-|+|- |-+|..+|+.|++.|++|++.+|++++.+++.++- ...-.....+...+.+.+.+.
T Consensus 3 ~nIg~IGl-G~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~ii~~~~~~~~v~ 81 (176)
T d2pgda2 3 ADIALIGL-AVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVSKLKKPRRIILLVKAGQAVD 81 (176)
T ss_dssp BSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHHBCSSCEEEECSCTTHHHH
T ss_pred CcEEEEeE-hHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHhccccccccchhhhhhhhhhhcccceEEEecCchHHHH
Confidence 45677776 79999999999999999999999999888775431 111122345555777778888
Q ss_pred HHHHHHHHHhCCccEEEEcCC
Q 025672 78 RVVESTINHFGKLDILVNAAA 98 (249)
Q Consensus 78 ~~~~~~~~~~~~id~vi~~ag 98 (249)
.....+.....+=+++|....
T Consensus 82 ~v~~~l~~~~~~g~iiid~sT 102 (176)
T d2pgda2 82 NFIEKLVPLLDIGDIIIDGGN 102 (176)
T ss_dssp HHHHHHHHHCCTTCEEEECSC
T ss_pred HHHHHHHhccccCcEEEecCc
Confidence 888888776655567777665
|
| >d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=97.19 E-value=0.00066 Score=49.37 Aligned_cols=80 Identities=14% Similarity=0.182 Sum_probs=54.4
Q ss_pred CCCcEEEEecCCCchhHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHH-HHHHHHHHHHHh
Q 025672 10 LKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKRED-AVRVVESTINHF 87 (249)
Q Consensus 10 l~~k~~lItGa~~giG~~~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~-~~~~~~~~~~~~ 87 (249)
-.|.+++|+|+ ||+|...+..+...|+ +|+.+++++++++. +.++ |....+ |-++.+. .+.+.+.. ..
T Consensus 28 ~~g~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~-Ak~~---GA~~~i---n~~~~~~~~~~~~~~~--~g 97 (176)
T d1d1ta2 28 KPGSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDKFEK-AMAV---GATECI---SPKDSTKPISEVLSEM--TG 97 (176)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHH-HHHH---TCSEEE---CGGGCSSCHHHHHHHH--HT
T ss_pred CCCCEEEEECC-CchhHHHHHHHHHcCCceEEEecCcHHHHHH-HHhc---CCcEEE---CccccchHHHHHHHHh--cc
Confidence 35889999986 8999999999999996 79999999998774 4444 333222 3333222 22222221 12
Q ss_pred CCccEEEEcCCC
Q 025672 88 GKLDILVNAAAG 99 (249)
Q Consensus 88 ~~id~vi~~ag~ 99 (249)
..+|++|.+.|.
T Consensus 98 ~G~d~vi~~~g~ 109 (176)
T d1d1ta2 98 NNVGYTFEVIGH 109 (176)
T ss_dssp SCCCEEEECSCC
T ss_pred ccceEEEEeCCc
Confidence 479999999983
|
| >d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=97.17 E-value=0.00028 Score=51.52 Aligned_cols=41 Identities=20% Similarity=0.273 Sum_probs=36.2
Q ss_pred CcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHH
Q 025672 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSA 52 (249)
Q Consensus 12 ~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~ 52 (249)
+.++||+||+||+|...+.-....|++|+.+.+++++.+.+
T Consensus 32 ~~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~~~ 72 (177)
T d1o89a2 32 DGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYL 72 (177)
T ss_dssp GCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHH
T ss_pred CCcEEEEEccccchHHHHHHHHHcCCCeEEEecchhHHHHH
Confidence 45899999999999999988889999999999998876544
|
| >d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YahK species: Escherichia coli [TaxId: 562]
Probab=97.16 E-value=0.00089 Score=48.15 Aligned_cols=74 Identities=22% Similarity=0.274 Sum_probs=53.2
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCc
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 90 (249)
.|.+++|.|+ |+||...+..+...|+++++++++.++.+ ..+++ |... + +|..+.+... +....+
T Consensus 30 ~G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~~~-~a~~l---Gad~-~--i~~~~~~~~~-------~~~~~~ 94 (168)
T d1uufa2 30 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKRE-AAKAL---GADE-V--VNSRNADEMA-------AHLKSF 94 (168)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHH-HHHHH---TCSE-E--EETTCHHHHH-------TTTTCE
T ss_pred CCCEEEEecc-chHHHHHHHHhhcccccchhhccchhHHH-HHhcc---CCcE-E--EECchhhHHH-------HhcCCC
Confidence 4889999986 89999999888889999999999888764 33444 3332 2 3555554322 222579
Q ss_pred cEEEEcCCC
Q 025672 91 DILVNAAAG 99 (249)
Q Consensus 91 d~vi~~ag~ 99 (249)
|++|.+.|.
T Consensus 95 D~vid~~g~ 103 (168)
T d1uufa2 95 DFILNTVAA 103 (168)
T ss_dssp EEEEECCSS
T ss_pred ceeeeeeec
Confidence 999999984
|
| >d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Chlorobium vibrioforme [TaxId: 1098]
Probab=97.13 E-value=0.0061 Score=42.34 Aligned_cols=112 Identities=12% Similarity=0.139 Sum_probs=67.8
Q ss_pred EEEEecCCCchhHHHHHHHHHcCC--eEEEEeCCcchHHHHHHHHHhc----CCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 14 VALLTGGGSGIGFEISLQLGKHGA--AIAIMGRRKTVLRSAVAALHSL----GIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 14 ~~lItGa~~giG~~~a~~l~~~G~--~v~l~~r~~~~~~~~~~~~~~~----~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
.+.|+|+ |.+|..++..|+.+|. +++++|.++++++.....+... .....+... .+.++ +
T Consensus 2 KI~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~--~~~~~-----------~ 67 (142)
T d1guza1 2 KITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGS--NDYAD-----------T 67 (142)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEE--SCGGG-----------G
T ss_pred EEEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEEec--CCHHH-----------h
Confidence 4678896 8999999999999984 7999999998877655555332 223333322 22222 2
Q ss_pred CCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecc
Q 025672 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISA 156 (249)
Q Consensus 88 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss 156 (249)
..-|++|.++|..... ..+. ...++.|.. +++-+.+.+.+..+ .+.++++|.
T Consensus 68 ~dadvvvitag~~~~~---g~~r---~~l~~~N~~----i~~~i~~~i~~~~p-------~aivivvtN 119 (142)
T d1guza1 68 ANSDIVIITAGLPRKP---GMTR---EDLLMKNAG----IVKEVTDNIMKHSK-------NPIIIVVSN 119 (142)
T ss_dssp TTCSEEEECCSCCCCT---TCCH---HHHHHHHHH----HHHHHHHHHHHHCS-------SCEEEECCS
T ss_pred cCCeEEEEEEecCCCC---CCch---HHHHHHHHH----HHHHHHHHhhccCC-------CeEEEEecC
Confidence 3579999999864321 1222 334555544 34444555544433 255666655
|
| >d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Horse (Equus caballus) [TaxId: 9796]
Probab=97.10 E-value=0.0018 Score=46.81 Aligned_cols=79 Identities=16% Similarity=0.242 Sum_probs=53.5
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCC-HHHHHHHHHHHHHHhC
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK-REDAVRVVESTINHFG 88 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~ 88 (249)
.|.+++|.|+ +|+|...+..+...|+ +|+.+++++++.+... ++ +..-.+ |-.+ ++.++...... ..+
T Consensus 28 ~GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~-~~---Ga~~~i---~~~~~~~~~~~~~~~~--~~~ 97 (176)
T d2jhfa2 28 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAK-EV---GATECV---NPQDYKKPIQEVLTEM--SNG 97 (176)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HT---TCSEEE---CGGGCSSCHHHHHHHH--TTS
T ss_pred CCCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHHHHHHHH-Hh---CCeeEE---ecCCchhHHHHHHHHH--hcC
Confidence 5789999999 6899999999999986 7889999988866443 22 332222 2222 22344444333 225
Q ss_pred CccEEEEcCCC
Q 025672 89 KLDILVNAAAG 99 (249)
Q Consensus 89 ~id~vi~~ag~ 99 (249)
.+|++|.+.|.
T Consensus 98 G~D~vid~~G~ 108 (176)
T d2jhfa2 98 GVDFSFEVIGR 108 (176)
T ss_dssp CBSEEEECSCC
T ss_pred CCCEEEecCCc
Confidence 79999999984
|
| >d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=97.08 E-value=0.013 Score=40.63 Aligned_cols=112 Identities=10% Similarity=0.036 Sum_probs=69.0
Q ss_pred EEEEecCCCchhHHHHHHHHHcCC--eEEEEeCCcchHHHHHHHHHhc----CCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 14 VALLTGGGSGIGFEISLQLGKHGA--AIAIMGRRKTVLRSAVAALHSL----GIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 14 ~~lItGa~~giG~~~a~~l~~~G~--~v~l~~r~~~~~~~~~~~~~~~----~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
.+.|+|+ |.+|..+|..|+.+|. +++++|.+++..+....++.+. +....+... .|.+ .+
T Consensus 2 KI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~~--~d~~-----------~~ 67 (142)
T d1ojua1 2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG--ADYS-----------LL 67 (142)
T ss_dssp EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEE--SCGG-----------GG
T ss_pred EEEEECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccccCCCCccccC--CCHH-----------Hh
Confidence 4677886 9999999999999986 6999999988877666666432 222222221 1112 12
Q ss_pred CCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecc
Q 025672 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISA 156 (249)
Q Consensus 88 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss 156 (249)
..-|++|..+|..... ..+. .+.+..|. .+++.+.+.+.+..+ .+.++++|.
T Consensus 68 ~~adiVvitag~~~~~---g~~r---~~l~~~n~----~i~~~i~~~i~~~~p-------~aivivvtN 119 (142)
T d1ojua1 68 KGSEIIVVTAGLARKP---GMTR---LDLAHKNA----GIIKDIAKKIVENAP-------ESKILVVTN 119 (142)
T ss_dssp TTCSEEEECCCCCCCS---SCCH---HHHHHHHH----HHHHHHHHHHHTTST-------TCEEEECSS
T ss_pred ccccEEEEeccccCCC---CCch---HHHHHHhh----HHHHHHHHHHHhhCC-------CcEEEEecC
Confidence 3579999999854321 1222 33444454 455666666666543 355666665
|
| >d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase-like protein HI0607 species: Haemophilus influenzae [TaxId: 727]
Probab=97.07 E-value=0.00046 Score=49.81 Aligned_cols=46 Identities=15% Similarity=0.217 Sum_probs=40.8
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHH
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALH 57 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~ 57 (249)
++|.++|.|+ ||.+++++..|.+.|+ ++.++.|+.++.+.+++.+.
T Consensus 16 ~~~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~~ 62 (167)
T d1npya1 16 KNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYG 62 (167)
T ss_dssp TTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHT
T ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhhh
Confidence 5788999987 7999999999999997 79999999998888887663
|
| >d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Frog (Rana perezi) [TaxId: 8403]
Probab=97.05 E-value=0.0011 Score=48.08 Aligned_cols=80 Identities=24% Similarity=0.336 Sum_probs=54.3
Q ss_pred CCCcEEEEecCCCchhHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHH-HHHHHHHHHHHHh
Q 025672 10 LKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKRE-DAVRVVESTINHF 87 (249)
Q Consensus 10 l~~k~~lItGa~~giG~~~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~ 87 (249)
-.|.+++|.|+ ||+|...+..+...|+ +|+.+++++++++... + .|.... + |.++.+ .++...... ..
T Consensus 26 ~~G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~-~---lGa~~~-i--~~~~~d~~~~~~~~~~--~~ 95 (174)
T d1p0fa2 26 TPGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAI-E---LGATEC-L--NPKDYDKPIYEVICEK--TN 95 (174)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH-H---TTCSEE-E--CGGGCSSCHHHHHHHH--TT
T ss_pred CCCCEEEEECC-CchhHHHHHHHHHcCCceeeccCChHHHHHHHH-H---cCCcEE-E--cCCCchhHHHHHHHHh--cC
Confidence 45889999986 8999999999999997 6889999988876543 2 343322 2 333322 133333222 22
Q ss_pred CCccEEEEcCCC
Q 025672 88 GKLDILVNAAAG 99 (249)
Q Consensus 88 ~~id~vi~~ag~ 99 (249)
+.+|++|.+.|.
T Consensus 96 ~G~d~vid~~g~ 107 (174)
T d1p0fa2 96 GGVDYAVECAGR 107 (174)
T ss_dssp SCBSEEEECSCC
T ss_pred CCCcEEEEcCCC
Confidence 479999999883
|
| >d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Benzyl alcohol dehydrogenase species: Acinetobacter calcoaceticus [TaxId: 471]
Probab=97.01 E-value=0.0015 Score=47.24 Aligned_cols=77 Identities=16% Similarity=0.241 Sum_probs=51.0
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCCe-EEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCC
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGAA-IAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK 89 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~~-v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 89 (249)
.|.+++|.|+ |+||...+..+...|++ |+++++++++++.+ +++ |. .+++ |..+++- .+.+.++ .-+.
T Consensus 28 ~g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a-~~~---Ga-~~~i--~~~~~~~-~~~i~~~--t~gg 96 (174)
T d1f8fa2 28 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELA-KQL---GA-THVI--NSKTQDP-VAAIKEI--TDGG 96 (174)
T ss_dssp TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHH-HHH---TC-SEEE--ETTTSCH-HHHHHHH--TTSC
T ss_pred CCCEEEEeCC-CHHHhhhhhcccccccceeeeeccHHHHHHHH-HHc---CC-eEEE--eCCCcCH-HHHHHHH--cCCC
Confidence 5889999987 89999999988889996 55667777665544 344 32 2333 5554332 2222222 1257
Q ss_pred ccEEEEcCC
Q 025672 90 LDILVNAAA 98 (249)
Q Consensus 90 id~vi~~ag 98 (249)
+|++|.+.|
T Consensus 97 ~D~vid~~G 105 (174)
T d1f8fa2 97 VNFALESTG 105 (174)
T ss_dssp EEEEEECSC
T ss_pred CcEEEEcCC
Confidence 999999998
|
| >d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Mouse (Mus musculus), class II [TaxId: 10090]
Probab=96.97 E-value=0.0018 Score=46.86 Aligned_cols=78 Identities=19% Similarity=0.242 Sum_probs=52.2
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCH-HHHHHHHHHHHHHhC
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKR-EDAVRVVESTINHFG 88 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~~~ 88 (249)
.|.+|+|.|+ |+||...+..+...|+ +|+++++++++++ +++++ |... ++ |..+. +.++...... ..+
T Consensus 28 ~G~~VlV~G~-G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~-~a~~~---Ga~~-~i--~~~~~~~~~~~~~~~~--~~~ 97 (174)
T d1e3ia2 28 PGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFP-KAKAL---GATD-CL--NPRELDKPVQDVITEL--TAG 97 (174)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHH-HHHHT---TCSE-EE--CGGGCSSCHHHHHHHH--HTS
T ss_pred CCCEEEEECC-ChHHHHHHHHHHHhCCceeeeeccchHHHH-HHHHh---CCCc-cc--CCccchhhhhhhHhhh--hcC
Confidence 5789999975 9999999999999998 5888898887754 33333 3322 22 32222 2233333322 235
Q ss_pred CccEEEEcCC
Q 025672 89 KLDILVNAAA 98 (249)
Q Consensus 89 ~id~vi~~ag 98 (249)
.+|++|.+.|
T Consensus 98 G~d~vie~~G 107 (174)
T d1e3ia2 98 GVDYSLDCAG 107 (174)
T ss_dssp CBSEEEESSC
T ss_pred CCcEEEEecc
Confidence 7999999999
|
| >d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=96.96 E-value=0.0037 Score=44.49 Aligned_cols=81 Identities=19% Similarity=0.147 Sum_probs=54.6
Q ss_pred EEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHH--h--------cCCCeeEEEccCCCHHHHHHHHHHH
Q 025672 14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALH--S--------LGIPAIGLEGDVRKREDAVRVVEST 83 (249)
Q Consensus 14 ~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~--~--------~~~~~~~~~~Dl~~~~~~~~~~~~~ 83 (249)
++.|.|. |-+|.++|+.|.++|++|++.+|+++..++..+.-. . ....+.++.+ ..+.++++++++
T Consensus 2 kI~iIG~-G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~DiIilav---p~~~~~~vl~~l 77 (165)
T d2f1ka2 2 KIGVVGL-GLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQDLSLLQTAKIIFLCT---PIQLILPTLEKL 77 (165)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEESCGGGGTTCSEEEECS---CHHHHHHHHHHH
T ss_pred EEEEEee-cHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHhhccceeeeecccccccccccccC---cHhhhhhhhhhh
Confidence 3677765 899999999999999999999999877666544210 0 1223333322 356788888887
Q ss_pred HHHhCCccEEEEcCC
Q 025672 84 INHFGKLDILVNAAA 98 (249)
Q Consensus 84 ~~~~~~id~vi~~ag 98 (249)
.....+=.+|+...+
T Consensus 78 ~~~l~~~~iv~~~~s 92 (165)
T d2f1ka2 78 IPHLSPTAIVTDVAS 92 (165)
T ss_dssp GGGSCTTCEEEECCS
T ss_pred hhhcccccceeeccc
Confidence 665555455655544
|
| >d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Siroheme synthase CysG, domain 1 species: Salmonella typhimurium [TaxId: 90371]
Probab=96.94 E-value=0.004 Score=41.47 Aligned_cols=39 Identities=21% Similarity=0.266 Sum_probs=34.6
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcc
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT 47 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~ 47 (249)
.+++||++||+|++ .+|..-++.|++.|++|++++....
T Consensus 8 l~l~~k~vlVvG~G-~va~~ka~~ll~~ga~v~v~~~~~~ 46 (113)
T d1pjqa1 8 CQLRDRDCLIVGGG-DVAERKARLLLEAGARLTVNALTFI 46 (113)
T ss_dssp ECCBTCEEEEECCS-HHHHHHHHHHHHTTBEEEEEESSCC
T ss_pred EEeCCCEEEEECCC-HHHHHHHHHHHHCCCeEEEEeccCC
Confidence 46899999999987 6999999999999999999887554
|
| >d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=96.85 E-value=0.0019 Score=46.54 Aligned_cols=78 Identities=17% Similarity=0.229 Sum_probs=51.4
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCC-HHHHHHHHHHHHHHhC
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK-REDAVRVVESTINHFG 88 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~ 88 (249)
.|.+++|.|+ +|+|...+..+...|+ +|+.+++++++++ ..+++ |..- ++ |..+ .+.+...+... ..+
T Consensus 28 ~G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k~~-~ak~l---Ga~~-~i--~~~~~~~~~~~~~~~~--~~~ 97 (176)
T d2fzwa2 28 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFA-RAKEF---GATE-CI--NPQDFSKPIQEVLIEM--TDG 97 (176)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHH-HHHHH---TCSE-EE--CGGGCSSCHHHHHHHH--TTS
T ss_pred CCCEEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHHHHH-HHHHh---CCcE-EE--eCCchhhHHHHHHHHH--cCC
Confidence 5889999998 5999999999999997 5777777776654 44455 3322 22 3322 23344444332 124
Q ss_pred CccEEEEcCC
Q 025672 89 KLDILVNAAA 98 (249)
Q Consensus 89 ~id~vi~~ag 98 (249)
.+|++|.+.|
T Consensus 98 g~D~vid~~G 107 (176)
T d2fzwa2 98 GVDYSFECIG 107 (176)
T ss_dssp CBSEEEECSC
T ss_pred CCcEeeecCC
Confidence 7999999998
|
| >d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=96.83 E-value=0.013 Score=41.12 Aligned_cols=106 Identities=13% Similarity=0.143 Sum_probs=58.8
Q ss_pred CcEEEEecCCCchhHHHHHHHHHcCC-------eEEEEeCCcc--hHHHHHHHHHhcC-CCeeEEEccCCCHHHHHHHHH
Q 025672 12 GKVALLTGGGSGIGFEISLQLGKHGA-------AIAIMGRRKT--VLRSAVAALHSLG-IPAIGLEGDVRKREDAVRVVE 81 (249)
Q Consensus 12 ~k~~lItGa~~giG~~~a~~l~~~G~-------~v~l~~r~~~--~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~ 81 (249)
...+.|+||+|.+|++++..|+..+. .+++.+.++. .++.+..++.... .....+ ..++..
T Consensus 3 p~KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~~~~~~~l~~~~~~~~~~~~~~~--~~~~~~------- 73 (154)
T d5mdha1 3 PIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDV--IATDKE------- 73 (154)
T ss_dssp CEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEE--EEESCH-------
T ss_pred ceEEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccchhhhhhhhhhhccccccccccc--ccCccc-------
Confidence 34789999999999999999987653 3566665543 3344444443321 222222 222111
Q ss_pred HHHHHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc
Q 025672 82 STINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKG 138 (249)
Q Consensus 82 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 138 (249)
.+.+...|++|..+|...... .+.+ +.++.|. .+++.+.+.+.+.
T Consensus 74 --~~~~~~~dvVVitag~~~~~g---~sr~---dll~~N~----~i~k~~~~~i~k~ 118 (154)
T d5mdha1 74 --EIAFKDLDVAILVGSMPRRDG---MERK---DLLKANV----KIFKCQGAALDKY 118 (154)
T ss_dssp --HHHTTTCSEEEECCSCCCCTT---CCTT---TTHHHHH----HHHHHHHHHHHHH
T ss_pred --ccccCCceEEEEecccCCCCC---Cchh---HHHHHhH----HHHHHHHHHHHhh
Confidence 122346899999998643221 2222 2345554 4555556565553
|
| >d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=96.82 E-value=0.00095 Score=48.50 Aligned_cols=49 Identities=18% Similarity=0.283 Sum_probs=42.7
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHh
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHS 58 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~ 58 (249)
.++++|.++|.|+ ||.+++++..|.+.| +|.++.|+.++.+++.+.+..
T Consensus 14 ~~~~~k~vlIlGa-GG~arai~~aL~~~~-~i~I~nR~~~ka~~l~~~~~~ 62 (177)
T d1nvta1 14 GRVKDKNIVIYGA-GGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAE 62 (177)
T ss_dssp CCCCSCEEEEECC-SHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHH
T ss_pred CCcCCCEEEEECC-cHHHHHHHHHHcccc-ceeeehhhhhHHHHHHHHHHH
Confidence 3589999999987 589999999998777 999999999999999888854
|
| >d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Short chain L-3-hydroxyacyl CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.80 E-value=0.0012 Score=48.73 Aligned_cols=44 Identities=16% Similarity=0.326 Sum_probs=38.2
Q ss_pred cEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHH
Q 025672 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALH 57 (249)
Q Consensus 13 k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~ 57 (249)
|++.|.|+ |-+|..+|..++..|++|++++++++.+++..+.++
T Consensus 5 kkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~a~~~i~ 48 (192)
T d1f0ya2 5 KHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIE 48 (192)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHH
T ss_pred EEEEEECc-CHHHHHHHHHHHhCCCcEEEEECChHHHHHHHhhHH
Confidence 68899998 689999999999999999999999987776655553
|
| >d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase species: Arthrobacter, strain 1c [TaxId: 1663]
Probab=96.76 E-value=0.0011 Score=47.98 Aligned_cols=41 Identities=12% Similarity=0.110 Sum_probs=36.5
Q ss_pred cEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHH
Q 025672 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVA 54 (249)
Q Consensus 13 k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~ 54 (249)
|++.|.|+ |.+|.++|..|+++|++|.+++|++++.+.+.+
T Consensus 2 k~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~~ 42 (184)
T d1bg6a2 2 KTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQD 42 (184)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred CEEEEECc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH
Confidence 78899998 799999999999999999999999887766554
|
| >d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=96.74 E-value=0.007 Score=42.99 Aligned_cols=76 Identities=18% Similarity=0.168 Sum_probs=49.6
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCc
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 90 (249)
.+.+++|.|+ |+||...+..+...|++|+++++++++++.++ ..|....+ |-++.+..+. +.+.....
T Consensus 27 ~g~~vlv~G~-G~iG~~a~~~a~~~g~~v~~~~~~~~r~~~~k----~~Ga~~~~---~~~~~~~~~~----~~~~~~~~ 94 (168)
T d1rjwa2 27 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAK----ELGADLVV---NPLKEDAAKF----MKEKVGGV 94 (168)
T ss_dssp TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHH----HTTCSEEE---CTTTSCHHHH----HHHHHSSE
T ss_pred CCCEEEEeec-ccchhhhhHHHhcCCCeEeccCCCHHHhhhhh----hcCcceec---ccccchhhhh----cccccCCC
Confidence 4788999875 89999998888899999999999988766543 23443222 4444332222 22223455
Q ss_pred cEEEEcCC
Q 025672 91 DILVNAAA 98 (249)
Q Consensus 91 d~vi~~ag 98 (249)
+.+|.+++
T Consensus 95 ~~~v~~~~ 102 (168)
T d1rjwa2 95 HAAVVTAV 102 (168)
T ss_dssp EEEEESSC
T ss_pred ceEEeecC
Confidence 66666766
|
| >d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Phenylalanine dehydrogenase species: Rhodococcus sp., M4 [TaxId: 1831]
Probab=96.73 E-value=0.0014 Score=48.59 Aligned_cols=43 Identities=16% Similarity=0.252 Sum_probs=37.6
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHH
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRS 51 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~ 51 (249)
.+++||+++|.| .|.+|..+|+.|.+.|++|++.+.+.+.+..
T Consensus 23 ~~L~gk~v~IqG-~G~VG~~~A~~L~~~Gakvvv~d~d~~~~~~ 65 (201)
T d1c1da1 23 GSLDGLTVLVQG-LGAVGGSLASLAAEAGAQLLVADTDTERVAH 65 (201)
T ss_dssp CCSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHH
T ss_pred CCCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEecchHHHHHH
Confidence 469999999987 7789999999999999999999988766544
|
| >d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: L-alanine dehydrogenase species: Phormidium lapideum [TaxId: 32060]
Probab=96.66 E-value=0.013 Score=41.71 Aligned_cols=80 Identities=19% Similarity=0.116 Sum_probs=61.7
Q ss_pred CCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCC
Q 025672 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK 89 (249)
Q Consensus 10 l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 89 (249)
.+.-+++|.|+. -.|...++.....|++|.++|.+.++++++...... .+. .-.++++.+++.+. .
T Consensus 30 v~pa~V~ViGaG-vaG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~~~---~~~---~~~~~~~~l~~~~~-------~ 95 (168)
T d1pjca1 30 VKPGKVVILGGG-VVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGS---RVE---LLYSNSAEIETAVA-------E 95 (168)
T ss_dssp BCCCEEEEECCS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGG---GSE---EEECCHHHHHHHHH-------T
T ss_pred CCCcEEEEECCC-hHHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhhcc---cce---eehhhhhhHHHhhc-------c
Confidence 467888999875 789999999999999999999999999888776643 233 34566777666554 4
Q ss_pred ccEEEEcCCCCCCC
Q 025672 90 LDILVNAAAGNFLV 103 (249)
Q Consensus 90 id~vi~~ag~~~~~ 103 (249)
-|+||.++-+....
T Consensus 96 aDivI~aalipG~~ 109 (168)
T d1pjca1 96 ADLLIGAVLVPGRR 109 (168)
T ss_dssp CSEEEECCCCTTSS
T ss_pred CcEEEEeeecCCcc
Confidence 69999998765543
|
| >d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Fatty oxidation complex alpha subunit, middle domain species: Pseudomonas fragi [TaxId: 296]
Probab=96.63 E-value=0.0087 Score=43.55 Aligned_cols=42 Identities=21% Similarity=0.252 Sum_probs=35.8
Q ss_pred cEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHH
Q 025672 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAA 55 (249)
Q Consensus 13 k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~ 55 (249)
|++.|.|+ |-+|..+|..++..|++|++.+++++.+++..+.
T Consensus 5 ~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~~~~~ 46 (186)
T d1wdka3 5 KQAAVLGA-GIMGGGIAYQSASKGTPILMKDINEHGIEQGLAE 46 (186)
T ss_dssp SSEEEECC-HHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHH
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCeEEEEECCHHHHhhhhhh
Confidence 56888888 7899999999999999999999998876655444
|
| >d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Cod (Gadus callarias) [TaxId: 8053]
Probab=96.63 E-value=0.0046 Score=44.39 Aligned_cols=79 Identities=14% Similarity=0.225 Sum_probs=50.9
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHH-HHHHHHHHHHHhC
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKRED-AVRVVESTINHFG 88 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~-~~~~~~~~~~~~~ 88 (249)
.|.+++|.|+ +|+|...+..+...|. +|+.+++++++++... + .|..- ++ |-++.++ .++..... ..+
T Consensus 28 ~g~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~-~---~GAd~-~i--n~~~~~~~~~~~~~~~--~~~ 97 (175)
T d1cdoa2 28 PGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAK-V---FGATD-FV--NPNDHSEPISQVLSKM--TNG 97 (175)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-H---TTCCE-EE--CGGGCSSCHHHHHHHH--HTS
T ss_pred CCCEEEEEec-CCccchHHHHHHHHhhchheeecchHHHHHHHH-H---cCCcE-EE--cCCCcchhHHHHHHhh--ccC
Confidence 5789999986 6788888888888887 6888999888765533 2 34332 33 3333322 22222222 124
Q ss_pred CccEEEEcCCC
Q 025672 89 KLDILVNAAAG 99 (249)
Q Consensus 89 ~id~vi~~ag~ 99 (249)
.+|+++.+.|.
T Consensus 98 G~d~vid~~G~ 108 (175)
T d1cdoa2 98 GVDFSLECVGN 108 (175)
T ss_dssp CBSEEEECSCC
T ss_pred CcceeeeecCC
Confidence 79999999983
|
| >d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Aeropyrum pernix [TaxId: 56636]
Probab=96.57 E-value=0.0038 Score=44.80 Aligned_cols=77 Identities=19% Similarity=0.257 Sum_probs=50.7
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCC
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK 89 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 89 (249)
.|.+++|.|+ |++|...+..+...|+ +|+.+++++++++... +.+.. +++ |-. .+.++...+.. ....
T Consensus 32 ~g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~----~~ga~-~~i--~~~-~~~~~~~~~~~--~~~g 100 (172)
T d1h2ba2 32 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAE----RLGAD-HVV--DAR-RDPVKQVMELT--RGRG 100 (172)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHH----HTTCS-EEE--ETT-SCHHHHHHHHT--TTCC
T ss_pred CCCEEEEeCC-ChHHHHHHHHHHhhcCcccccccchhHHHHHHh----hcccc-eee--cCc-ccHHHHHHHhh--CCCC
Confidence 4789999886 9999999998888887 6777888877655443 23332 333 333 23444443321 1136
Q ss_pred ccEEEEcCC
Q 025672 90 LDILVNAAA 98 (249)
Q Consensus 90 id~vi~~ag 98 (249)
+|++|.++|
T Consensus 101 ~d~vid~~g 109 (172)
T d1h2ba2 101 VNVAMDFVG 109 (172)
T ss_dssp EEEEEESSC
T ss_pred ceEEEEecC
Confidence 999999998
|
| >d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Formaldehyde dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=96.54 E-value=0.0026 Score=46.89 Aligned_cols=80 Identities=14% Similarity=0.141 Sum_probs=51.9
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCC
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK 89 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 89 (249)
.|.+|+|.|+ |++|...+..+...|+ +|+++++++++++... +.|... + .|-.+. ++.+.+.++. ....
T Consensus 25 ~G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~----~~Ga~~-~--~~~~~~-~~~~~i~~~t-~g~g 94 (195)
T d1kola2 25 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHAK----AQGFEI-A--DLSLDT-PLHEQIAALL-GEPE 94 (195)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH----HTTCEE-E--ETTSSS-CHHHHHHHHH-SSSC
T ss_pred CCCEEEEECc-CHHHHHHHHHHHhhcccceeeecccchhhHhhh----hccccE-E--EeCCCc-CHHHHHHHHh-CCCC
Confidence 5889999986 7999888888777888 7889998887765433 334322 2 233333 3333333321 2236
Q ss_pred ccEEEEcCCCC
Q 025672 90 LDILVNAAAGN 100 (249)
Q Consensus 90 id~vi~~ag~~ 100 (249)
+|++|.+.|..
T Consensus 95 ~D~vid~vG~~ 105 (195)
T d1kola2 95 VDCAVDAVGFE 105 (195)
T ss_dssp EEEEEECCCTT
T ss_pred cEEEEECcccc
Confidence 99999999853
|
| >d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=96.41 E-value=0.00088 Score=47.28 Aligned_cols=37 Identities=27% Similarity=0.436 Sum_probs=33.0
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCC
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR 45 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~ 45 (249)
..++||++||+|| |.+|..-++.|++.|++|++++..
T Consensus 9 ~~l~gkrvLViGg-G~va~~ka~~Ll~~GA~VtVvap~ 45 (150)
T d1kyqa1 9 HQLKDKRILLIGG-GEVGLTRLYKLMPTGCKLTLVSPD 45 (150)
T ss_dssp ECCTTCEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred eeeCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3489999999999 569999999999999999998754
|
| >d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Molybdenum cofactor biosynthesis protein MoeB domain: Molybdenum cofactor biosynthesis protein MoeB species: Escherichia coli [TaxId: 562]
Probab=96.39 E-value=0.0089 Score=45.46 Aligned_cols=35 Identities=26% Similarity=0.420 Sum_probs=30.9
Q ss_pred CCCcEEEEecCCCchhHHHHHHHHHcCC-eEEEEeCC
Q 025672 10 LKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRR 45 (249)
Q Consensus 10 l~~k~~lItGa~~giG~~~a~~l~~~G~-~v~l~~r~ 45 (249)
|++++|+|.| .||+|..++..|++.|. ++.++|.+
T Consensus 28 L~~~~VliiG-~GglGs~va~~La~~Gvg~i~lvD~D 63 (247)
T d1jw9b_ 28 LKDSRVLIVG-LGGLGCAASQYLASAGVGNLTLLDFD 63 (247)
T ss_dssp HHHCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred HhCCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCc
Confidence 6788999999 56999999999999998 79998863
|
| >d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Salmonella typhimurium [TaxId: 90371]
Probab=96.36 E-value=0.0036 Score=44.49 Aligned_cols=83 Identities=14% Similarity=0.120 Sum_probs=56.2
Q ss_pred EEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHh-------cCCCeeEEEccCCCHHHHHHHH---HHHH
Q 025672 15 ALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHS-------LGIPAIGLEGDVRKREDAVRVV---ESTI 84 (249)
Q Consensus 15 ~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~-------~~~~~~~~~~Dl~~~~~~~~~~---~~~~ 84 (249)
+-|.| .|-+|..+|+.|+++|++|++.+|++++.+.+.+.-.. .-....++-.-+.+.+.++.++ ..+.
T Consensus 3 IgiIG-lG~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~e~~~~~d~ii~~v~~~~~v~~v~~~~~~~~ 81 (161)
T d1vpda2 3 VGFIG-LGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAETASTAKAIAEQCDVIITMLPNSPHVKEVALGENGII 81 (161)
T ss_dssp EEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCHH
T ss_pred EEEEe-hhHHHHHHHHHHHHCCCeEEEEeCCcchhHHHHHhhhhhcccHHHHHhCCCeEEEEcCCHHHHHHHHhCCcchh
Confidence 55665 47999999999999999999999998877766542110 0012345555778888888876 3344
Q ss_pred HHhCCccEEEEcCC
Q 025672 85 NHFGKLDILVNAAA 98 (249)
Q Consensus 85 ~~~~~id~vi~~ag 98 (249)
....+=+++|.+..
T Consensus 82 ~~~~~g~iiid~sT 95 (161)
T d1vpda2 82 EGAKPGTVLIDMSS 95 (161)
T ss_dssp HHCCTTCEEEECSC
T ss_pred hccCCCCEEEECCC
Confidence 44444466776654
|
| >d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Leucine dehydrogenase species: Bacillus sphaericus [TaxId: 1421]
Probab=96.19 E-value=0.0022 Score=48.42 Aligned_cols=49 Identities=22% Similarity=0.327 Sum_probs=41.5
Q ss_pred CCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHH
Q 025672 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAAL 56 (249)
Q Consensus 7 ~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~ 56 (249)
..+++||+++|-| .|.+|..+|+.|.+.|++|+.++.+...++....+.
T Consensus 34 ~~~l~g~~v~IqG-~GnVG~~~a~~L~~~Gakvv~~d~~~~~~~~~~~~~ 82 (230)
T d1leha1 34 SDSLEGLAVSVQG-LGNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEE 82 (230)
T ss_dssp SCCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH
T ss_pred CCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEeecccHHHHHHHHHhc
Confidence 4568999988886 569999999999999999999999887777666554
|
| >d1wy7a1 c.66.1.32 (A:4-204) Hypothetical protein PH1948 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Ta1320-like domain: Hypothetical protein PH1948 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=96.15 E-value=0.023 Score=41.78 Aligned_cols=78 Identities=21% Similarity=0.204 Sum_probs=60.7
Q ss_pred CCCCCCcEEEEecCCCchhHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHH
Q 025672 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN 85 (249)
Q Consensus 7 ~~~l~~k~~lItGa~~giG~~~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 85 (249)
..+++|+++|=.|++.|. ++..++.+|+ +|+.++.++..++.+.+.+...+.+..++..|+.+.
T Consensus 42 ~~dl~g~~vLDlg~GtG~---l~i~a~~~g~~~v~~vdi~~~~~~~a~~N~~~~~~~~~~~~~d~~~~------------ 106 (201)
T d1wy7a1 42 LGDIEGKVVADLGAGTGV---LSYGALLLGAKEVICVEVDKEAVDVLIENLGEFKGKFKVFIGDVSEF------------ 106 (201)
T ss_dssp TTSSTTCEEEEETCTTCH---HHHHHHHTTCSEEEEEESCHHHHHHHHHHTGGGTTSEEEEESCGGGC------------
T ss_pred cCCCCCCEEEECcCcchH---HHHHHHHcCCCEEEEEcCcHHHHHHHHHHHHHcCCCceEEECchhhh------------
Confidence 346889999999988772 3445567886 799999999888888777777777888998887542
Q ss_pred HhCCccEEEEcCCCC
Q 025672 86 HFGKLDILVNAAAGN 100 (249)
Q Consensus 86 ~~~~id~vi~~ag~~ 100 (249)
.+++|+||.|+-+.
T Consensus 107 -~~~fD~Vi~nPP~~ 120 (201)
T d1wy7a1 107 -NSRVDIVIMNPPFG 120 (201)
T ss_dssp -CCCCSEEEECCCCS
T ss_pred -CCcCcEEEEcCccc
Confidence 25799999998754
|
| >d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Aquifex aeolicus [TaxId: 63363]
Probab=96.14 E-value=0.036 Score=39.23 Aligned_cols=82 Identities=11% Similarity=0.034 Sum_probs=54.1
Q ss_pred cEEEEecCCCchhHHHHHHHHHcCC--eEEEEeCCcchHHHHHHHHH-h-----------cCCCeeEEEccCCCHHHHHH
Q 025672 13 KVALLTGGGSGIGFEISLQLGKHGA--AIAIMGRRKTVLRSAVAALH-S-----------LGIPAIGLEGDVRKREDAVR 78 (249)
Q Consensus 13 k~~lItGa~~giG~~~a~~l~~~G~--~v~l~~r~~~~~~~~~~~~~-~-----------~~~~~~~~~~Dl~~~~~~~~ 78 (249)
|+++|.|. |-+|.++|+.|.+.|+ +|+..+++++.++...+.-. . ....+.++ .+-.+.+..
T Consensus 2 k~I~IIG~-G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~dlIil---a~p~~~~~~ 77 (171)
T d2g5ca2 2 QNVLIVGV-GFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVML---SSPVRTFRE 77 (171)
T ss_dssp CEEEEESC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCGGGGGGTCCSEEEE---CSCHHHHHH
T ss_pred CEEEEEcc-CHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHHhhcchhhhhhhhhhhccccccccc---cCCchhhhh
Confidence 35888875 8999999999999996 68889999877766544310 0 01122222 233567888
Q ss_pred HHHHHHHHhCCccEEEEcCC
Q 025672 79 VVESTINHFGKLDILVNAAA 98 (249)
Q Consensus 79 ~~~~~~~~~~~id~vi~~ag 98 (249)
+++++......=.+++...+
T Consensus 78 vl~~l~~~~~~~~ii~d~~s 97 (171)
T d2g5ca2 78 IAKKLSYILSEDATVTDQGS 97 (171)
T ss_dssp HHHHHHHHSCTTCEEEECCS
T ss_pred hhhhhhcccccccccccccc
Confidence 88887766654455655554
|
| >d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=96.09 E-value=0.02 Score=40.49 Aligned_cols=84 Identities=13% Similarity=0.084 Sum_probs=56.1
Q ss_pred EEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHh-------cCCCeeEEEccCCCHHHHHHHHHH---H
Q 025672 14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHS-------LGIPAIGLEGDVRKREDAVRVVES---T 83 (249)
Q Consensus 14 ~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~-------~~~~~~~~~~Dl~~~~~~~~~~~~---~ 83 (249)
++-+.| .|-+|.++|++|+++|++|.+.+|+.++.+.+...-.. ......++..-+.+.+.++.++.. +
T Consensus 3 kIg~IG-lG~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~~e~~~~~diii~~v~~~~~~~~v~~~~~~~ 81 (162)
T d3cuma2 3 QIAFIG-LGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGLYLDDDGL 81 (162)
T ss_dssp EEEEEC-CSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTSCSEEEECCSCHHHHHHHHHSTTCH
T ss_pred EEEEEE-EHHHHHHHHHHHHHCCCeEEEEECchhhhhhhhhhhccccchhhhhccccCeeeecccchhhHHHHHhccccc
Confidence 356664 57999999999999999999999998876665433211 112344666677888888877654 3
Q ss_pred HHHhCCccEEEEcCC
Q 025672 84 INHFGKLDILVNAAA 98 (249)
Q Consensus 84 ~~~~~~id~vi~~ag 98 (249)
.....+=+++|.+..
T Consensus 82 ~~~l~~g~iiid~st 96 (162)
T d3cuma2 82 LAHIAPGTLVLECST 96 (162)
T ss_dssp HHHSCTTCEEEECSC
T ss_pred cccCCCCCEEEECCC
Confidence 333333356666655
|
| >d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Glycinamide ribonucleotide transformylase PurT, N-domain species: Escherichia coli [TaxId: 562]
Probab=96.07 E-value=0.044 Score=36.06 Aligned_cols=70 Identities=17% Similarity=0.239 Sum_probs=53.9
Q ss_pred CcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCcc
Q 025672 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD 91 (249)
Q Consensus 12 ~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 91 (249)
..++.|.| +|=+|+-++....+.|+++++++.+++.-. ....-.++..|..|.+.+..+.... .+|
T Consensus 11 ~~kigIlG-gGQL~rMla~aA~~lG~~v~v~d~~~~~PA--------~~va~~~i~~~~~d~~~l~~~~~~~-----~~D 76 (111)
T d1kjqa2 11 ATRVMLLG-SGELGKEVAIECQRLGVEVIAVDRYADAPA--------MHVAHRSHVINMLDGDALRRVVELE-----KPH 76 (111)
T ss_dssp CCEEEEES-CSHHHHHHHHHHHTTTCEEEEEESSTTCGG--------GGGSSEEEECCTTCHHHHHHHHHHH-----CCS
T ss_pred CCEEEEEe-CCHHHHHHHHHHHHCCCEEEEEcCCCCCch--------hhcCCeEEECCCCCHHHHHHHHHhh-----CCc
Confidence 45799998 458999999999999999999998765211 1112357788999999999988764 589
Q ss_pred EEEE
Q 025672 92 ILVN 95 (249)
Q Consensus 92 ~vi~ 95 (249)
+|..
T Consensus 77 viT~ 80 (111)
T d1kjqa2 77 YIVP 80 (111)
T ss_dssp EEEE
T ss_pred eEEE
Confidence 8854
|
| >d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: CoaB-like family: CoaB-like domain: Phosphopantothenoylcysteine synthetase species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.03 E-value=0.01 Score=46.39 Aligned_cols=23 Identities=13% Similarity=0.078 Sum_probs=20.8
Q ss_pred CchhHHHHHHHHHcCCeEEEEeC
Q 025672 22 SGIGFEISLQLGKHGAAIAIMGR 44 (249)
Q Consensus 22 ~giG~~~a~~l~~~G~~v~l~~r 44 (249)
|..|.++|+.|..+|++|+++.+
T Consensus 46 Gk~G~alA~~~~~~Ga~V~li~g 68 (290)
T d1p9oa_ 46 GRRGATSAEAFLAAGYGVLFLYR 68 (290)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEEE
T ss_pred hHHHHHHHHHHHHcCCEEEEEec
Confidence 67899999999999999998854
|
| >d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Escherichia coli [TaxId: 562]
Probab=96.03 E-value=0.0089 Score=42.52 Aligned_cols=44 Identities=23% Similarity=0.219 Sum_probs=38.6
Q ss_pred CCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHH
Q 025672 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLR 50 (249)
Q Consensus 7 ~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~ 50 (249)
..+++||+++|.|.+.-+|+-++..|.++|++|+++......++
T Consensus 32 ~i~l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t~~l~ 75 (166)
T d1b0aa1 32 NIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLR 75 (166)
T ss_dssp TCCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCSCHH
T ss_pred CcccccceEEEEeccccccHHHHHHHHHhhccccccccccchhH
Confidence 34689999999999999999999999999999999887665444
|
| >d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Ubiquitin activating enzymes (UBA) domain: UBA3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.97 E-value=0.0036 Score=51.80 Aligned_cols=35 Identities=26% Similarity=0.411 Sum_probs=30.2
Q ss_pred CCCcEEEEecCCCchhHHHHHHHHHcCC-eEEEEeCC
Q 025672 10 LKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRR 45 (249)
Q Consensus 10 l~~k~~lItGa~~giG~~~a~~l~~~G~-~v~l~~r~ 45 (249)
|++..|||.|+ ||||.++++.|+..|. ++.++|.+
T Consensus 35 l~~~kVlvvG~-GglG~ei~k~L~~~Gvg~i~lvD~D 70 (426)
T d1yovb1 35 LDTCKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMD 70 (426)
T ss_dssp HHHCCEEEECS-STTHHHHHHHHHTTTCCCEEEECCC
T ss_pred HhcCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEECC
Confidence 45668999998 5899999999999998 69999874
|
| >d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.93 E-value=0.0066 Score=43.45 Aligned_cols=44 Identities=18% Similarity=0.217 Sum_probs=39.3
Q ss_pred CCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHH
Q 025672 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLR 50 (249)
Q Consensus 7 ~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~ 50 (249)
..+++||+++|.|.+.-+|+-++..|.++|++|.++......+.
T Consensus 34 ~i~l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t~~l~ 77 (170)
T d1a4ia1 34 GVPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAHLD 77 (170)
T ss_dssp TCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHH
T ss_pred CcccccceEEEEecCCccchHHHHHHHhccCceEEEecccccHH
Confidence 45689999999999999999999999999999999988766544
|
| >d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Potassium channel-related protein MthK species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]
Probab=95.87 E-value=0.0056 Score=41.65 Aligned_cols=70 Identities=14% Similarity=0.180 Sum_probs=50.7
Q ss_pred cEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCccE
Q 025672 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI 92 (249)
Q Consensus 13 k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ 92 (249)
|.++|.|. +.+|+.+++.| +|.++++++.+++..+... . ..+.++.+|.++++.++++- ...-+.
T Consensus 1 kHivI~G~-g~~g~~l~~~L--~~~~i~vi~~d~~~~~~~~----~--~~~~~i~Gd~~~~~~L~~a~------i~~A~~ 65 (129)
T d2fy8a1 1 RHVVICGW-SESTLECLREL--RGSEVFVLAEDENVRKKVL----R--SGANFVHGDPTRVSDLEKAN------VRGARA 65 (129)
T ss_dssp CCEEEESC-CHHHHHHHHTS--CGGGEEEEESCTTHHHHHH----H--TTCEEEESCTTSHHHHHHTT------CTTCSE
T ss_pred CEEEEECC-CHHHHHHHHHH--cCCCCEEEEcchHHHHHHH----h--cCccccccccCCHHHHHHhh------hhcCcE
Confidence 45677775 78999999999 4667888888887665442 2 24778889999998877651 245677
Q ss_pred EEEcC
Q 025672 93 LVNAA 97 (249)
Q Consensus 93 vi~~a 97 (249)
+|...
T Consensus 66 vi~~~ 70 (129)
T d2fy8a1 66 VIVNL 70 (129)
T ss_dssp EEECC
T ss_pred EEEec
Confidence 77654
|
| >d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-lactate dehydrogenase species: Lactobacillus helveticus [TaxId: 1587]
Probab=95.86 E-value=0.031 Score=40.94 Aligned_cols=41 Identities=17% Similarity=0.195 Sum_probs=35.2
Q ss_pred CCCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcc
Q 025672 6 KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT 47 (249)
Q Consensus 6 ~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~ 47 (249)
....++||++.|.|- |.||+.+|+.|...|++|+..++...
T Consensus 37 ~g~el~gk~vgIiG~-G~IG~~va~~l~~fg~~V~~~d~~~~ 77 (197)
T d1j4aa1 37 IGREVRDQVVGVVGT-GHIGQVFMQIMEGFGAKVITYDIFRN 77 (197)
T ss_dssp CBCCGGGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred cCccccCCeEEEecc-cccchhHHHhHhhhcccccccCcccc
Confidence 345689999999985 59999999999999999999987644
|
| >d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: 6-phosphogluconate dehydrogenase species: Trypanosoma brucei [TaxId: 5691]
Probab=95.84 E-value=0.032 Score=39.87 Aligned_cols=83 Identities=19% Similarity=0.159 Sum_probs=55.9
Q ss_pred EEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcC------------------CCeeEEEccCCCHHHH
Q 025672 15 ALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG------------------IPAIGLEGDVRKREDA 76 (249)
Q Consensus 15 ~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~------------------~~~~~~~~Dl~~~~~~ 76 (249)
+-|+ |.|-+|..+|++|++.|++|.+.+|++++.+++.++-.... .....+..-+.+...+
T Consensus 4 IGvI-GlG~MG~~ma~~L~~~G~~V~~~dr~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (178)
T d1pgja2 4 VGVV-GLGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKANASAPFAGNLKAFETMEAFAASLKKPRKALILVQAGAAT 82 (178)
T ss_dssp EEEE-CCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSTTGGGEEECSCHHHHHHHBCSSCEEEECCCCSHHH
T ss_pred EEEE-eehHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCccccccchhhhhhhhHHHHhcccceEEEEeecCcchh
Confidence 4445 46799999999999999999999999998888776542110 1123344455555666
Q ss_pred HHHHHHHHHHhCCccEEEEcCC
Q 025672 77 VRVVESTINHFGKLDILVNAAA 98 (249)
Q Consensus 77 ~~~~~~~~~~~~~id~vi~~ag 98 (249)
...+......+.+=+++|...-
T Consensus 83 ~~~~~~~~~~~~~~~iii~~st 104 (178)
T d1pgja2 83 DSTIEQLKKVFEKGDILVDTGN 104 (178)
T ss_dssp HHHHHHHHHHCCTTCEEEECCC
T ss_pred hhhhhhhhhhccccceecccCc
Confidence 6666666655555556666543
|
| >d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Haemophilus influenzae [TaxId: 727]
Probab=95.79 E-value=0.068 Score=34.10 Aligned_cols=74 Identities=22% Similarity=0.228 Sum_probs=47.6
Q ss_pred CCCCCcEEEEecCCCchh-HHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHH
Q 025672 8 DILKGKVALLTGGGSGIG-FEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG-~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 86 (249)
+.-+.|.+.+.|-. |+| .++|+.|.++|++|...|++..... +.+.+.|..+ ...+-. + .
T Consensus 4 ~~~~~~~ihfiGig-G~GMs~LA~~L~~~G~~VsGSD~~~~~~~---~~L~~~Gi~v--~~g~~~--~-----------~ 64 (96)
T d1p3da1 4 EMRRVQQIHFIGIG-GAGMSGIAEILLNEGYQISGSDIADGVVT---QRLAQAGAKI--YIGHAE--E-----------H 64 (96)
T ss_dssp CCTTCCEEEEETTT-STTHHHHHHHHHHHTCEEEEEESCCSHHH---HHHHHTTCEE--EESCCG--G-----------G
T ss_pred cchhCCEEEEEEEC-HHHHHHHHHHHHhCCCEEEEEeCCCChhh---hHHHHCCCeE--EECCcc--c-----------c
Confidence 34456788888765 677 4679999999999999998754322 2333444432 222211 1 1
Q ss_pred hCCccEEEEcCCCC
Q 025672 87 FGKLDILVNAAAGN 100 (249)
Q Consensus 87 ~~~id~vi~~ag~~ 100 (249)
....|.||...++.
T Consensus 65 i~~~d~vV~S~AI~ 78 (96)
T d1p3da1 65 IEGASVVVVSSAIK 78 (96)
T ss_dssp GTTCSEEEECTTSC
T ss_pred CCCCCEEEECCCcC
Confidence 23579999988864
|
| >d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Thermotoga maritima [TaxId: 2336]
Probab=95.77 E-value=0.043 Score=37.10 Aligned_cols=73 Identities=14% Similarity=0.134 Sum_probs=54.3
Q ss_pred EEEEecCCCchhHHHHHHHHHcCCeEEE-EeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCccE
Q 025672 14 VALLTGGGSGIGFEISLQLGKHGAAIAI-MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI 92 (249)
Q Consensus 14 ~~lItGa~~giG~~~a~~l~~~G~~v~l-~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ 92 (249)
.+.|.|++|.+|+.+++.+.++|++++. ++++.... +. ... +-.|+|.++.+.+.++.+.+. ++-+
T Consensus 2 ki~i~G~~GrMG~~i~~~~~~~~~~l~~~id~~~~~~------~~--~~D---VvIDFS~p~~~~~~l~~~~~~--~~p~ 68 (128)
T d1vm6a3 2 KYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNGVEE------LD--SPD---VVIDFSSPEALPKTVDLCKKY--RAGL 68 (128)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEEETTEEEE------CS--CCS---EEEECSCGGGHHHHHHHHHHH--TCEE
T ss_pred EEEEECCCCHHHHHHHHHHhcCCCeEEEEECCCcHHH------hc--cCC---EEEEecCHHHHHHHHHHHHhc--CCCE
Confidence 4899999999999999999999998664 45543210 11 122 345999999999999988766 4557
Q ss_pred EEEcCCC
Q 025672 93 LVNAAAG 99 (249)
Q Consensus 93 vi~~ag~ 99 (249)
|+-..|+
T Consensus 69 ViGTTG~ 75 (128)
T d1vm6a3 69 VLGTTAL 75 (128)
T ss_dssp EECCCSC
T ss_pred EEEcCCC
Confidence 7777773
|
| >d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Phosphoglycerate dehydrogenase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=95.77 E-value=0.015 Score=42.25 Aligned_cols=42 Identities=19% Similarity=0.231 Sum_probs=35.9
Q ss_pred CCCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcch
Q 025672 6 KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTV 48 (249)
Q Consensus 6 ~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~ 48 (249)
....+.+|++.|.| .|.||+.+++.+...|++|+..++....
T Consensus 38 ~~~~l~~k~vgiiG-~G~IG~~va~~~~~fg~~v~~~d~~~~~ 79 (184)
T d1ygya1 38 SGTEIFGKTVGVVG-LGRIGQLVAQRIAAFGAYVVAYDPYVSP 79 (184)
T ss_dssp CBCCCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSCH
T ss_pred ccccccceeeeecc-ccchhHHHHHHhhhccceEEeecCCCCh
Confidence 45568899999998 5799999999999999999999986543
|
| >d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Nicotinamide nucleotide transhydrogenase dI component species: Rhodospirillum rubrum [TaxId: 1085]
Probab=95.76 E-value=0.048 Score=39.19 Aligned_cols=85 Identities=16% Similarity=0.075 Sum_probs=54.2
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHH-------------
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAV------------- 77 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~------------- 77 (249)
+.-.++|.|+. -.|...++-....|++|.++|.+.+.++++.+... .++..+..+.+..+
T Consensus 28 ~pa~VvViGaG-vaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l~~l~~------~~i~~~~~~~~~~~~~~gyA~~~s~~~ 100 (183)
T d1l7da1 28 PPARVLVFGVG-VAGLQAIATAKRLGAVVMATDVRAATKEQVESLGG------KFITVDDEAMKTAETAGGYAKEMGEEF 100 (183)
T ss_dssp CCCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHTTC------EECCC----------------------
T ss_pred CCcEEEEEcCc-HHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHhhc------ceEEEeccccccccccccchhhcCHHH
Confidence 45578888875 78999999999999999999999998887765431 12222222222211
Q ss_pred --HHHHHHHHHhCCccEEEEcCCCCCC
Q 025672 78 --RVVESTINHFGKLDILVNAAAGNFL 102 (249)
Q Consensus 78 --~~~~~~~~~~~~id~vi~~ag~~~~ 102 (249)
..-+.+.+....-|+||-.+-+...
T Consensus 101 ~~~~~~~l~~~l~~aDlVI~talipG~ 127 (183)
T d1l7da1 101 RKKQAEAVLKELVKTDIAITTALIPGK 127 (183)
T ss_dssp -CCHHHHHHHHHTTCSEEEECCCCTTS
T ss_pred HHHHHHHHHHHHHhhhhheeeeecCCc
Confidence 1123333445678999998876553
|
| >d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Ketopantoate reductase PanE species: Escherichia coli [TaxId: 562]
Probab=95.76 E-value=0.0057 Score=43.26 Aligned_cols=35 Identities=17% Similarity=0.062 Sum_probs=31.5
Q ss_pred EEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchH
Q 025672 14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVL 49 (249)
Q Consensus 14 ~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~ 49 (249)
+++|.|+ |.+|..++..|++.|++|.+++|+.+..
T Consensus 2 kI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~~~ 36 (167)
T d1ks9a2 2 KITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQPY 36 (167)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCSE
T ss_pred EEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHHHh
Confidence 5789988 8999999999999999999999987643
|
| >d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-2-hydroxyisocaproate dehydrogenase species: Lactobacillus casei [TaxId: 1582]
Probab=95.62 E-value=0.031 Score=40.95 Aligned_cols=65 Identities=15% Similarity=0.024 Sum_probs=45.1
Q ss_pred CCCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchH-------HHHHHHHHhcCCCeeEEEccCCCH
Q 025672 6 KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVL-------RSAVAALHSLGIPAIGLEGDVRKR 73 (249)
Q Consensus 6 ~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~-------~~~~~~~~~~~~~~~~~~~Dl~~~ 73 (249)
....+.+|++.|.|. |.||+.+++.|...|++|+..++..... ..+.+-+.. ..+..+.+-+++.
T Consensus 39 ~~~~l~~ktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~~~~l~~l~~~--~D~v~~~~plt~~ 110 (199)
T d1dxya1 39 IGKELGQQTVGVMGT-GHIGQVAIKLFKGFGAKVIAYDPYPMKGDHPDFDYVSLEDLFKQ--SDVIDLHVPGIEQ 110 (199)
T ss_dssp CCCCGGGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCSSCCTTCEECCHHHHHHH--CSEEEECCCCCGG
T ss_pred ccccccceeeeeeec-ccccccccccccccceeeeccCCccchhhhcchhHHHHHHHHHh--cccceeeeccccc
Confidence 345688999999985 5899999999999999999999854321 112222222 3566666666654
|
| >d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=95.60 E-value=0.013 Score=41.94 Aligned_cols=82 Identities=13% Similarity=0.154 Sum_probs=54.7
Q ss_pred CCCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCee---EEEccC--CCHHHHHHHH
Q 025672 6 KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAI---GLEGDV--RKREDAVRVV 80 (249)
Q Consensus 6 ~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~---~~~~Dl--~~~~~~~~~~ 80 (249)
...+++||.++|.|-|.=+|+-++..|.++|+.|..+..+..... ..+..+. ....|+ -.++.++...
T Consensus 23 ~g~~l~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~lk~~~ 95 (171)
T d1edza1 23 EGNRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKF-------TRGESLKLNKHHVEDLGEYSEDLLKKCS 95 (171)
T ss_dssp TTCTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEE-------ESCCCSSCCCCEEEEEEECCHHHHHHHH
T ss_pred ccCCCCCCEEEEECCccccHHHHHHHHHHCCCEEEEecccccccc-------ccccceeeeeeccccccccchhHHhhcc
Confidence 445899999999999999999999999999999998876532110 0011111 111122 2344555555
Q ss_pred HHHHHHhCCccEEEEcCCCCC
Q 025672 81 ESTINHFGKLDILVNAAAGNF 101 (249)
Q Consensus 81 ~~~~~~~~~id~vi~~ag~~~ 101 (249)
. ..|++|...|...
T Consensus 96 ~-------~aDIvIsavG~p~ 109 (171)
T d1edza1 96 L-------DSDVVITGVPSEN 109 (171)
T ss_dssp H-------HCSEEEECCCCTT
T ss_pred c-------cCCEEEEccCCCc
Confidence 4 3799999988643
|
| >d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=95.59 E-value=0.024 Score=37.63 Aligned_cols=35 Identities=26% Similarity=0.477 Sum_probs=30.9
Q ss_pred CcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcc
Q 025672 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT 47 (249)
Q Consensus 12 ~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~ 47 (249)
.|.++|.||+ -+|.++|..|.+.|.+|.++.|.+.
T Consensus 22 p~~v~IiGgG-~ig~E~A~~l~~~G~~Vtlve~~~~ 56 (117)
T d1ebda2 22 PKSLVVIGGG-YIGIELGTAYANFGTKVTILEGAGE 56 (117)
T ss_dssp CSEEEEECCS-HHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CCeEEEECCC-ccceeeeeeecccccEEEEEEecce
Confidence 4788888875 9999999999999999999998764
|
| >d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent ferredoxin reductase, BphA4 species: Pseudomonas sp., KKS102 [TaxId: 306]
Probab=95.59 E-value=0.024 Score=37.95 Aligned_cols=35 Identities=23% Similarity=0.471 Sum_probs=30.9
Q ss_pred CcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcc
Q 025672 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT 47 (249)
Q Consensus 12 ~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~ 47 (249)
+|+++|.||+ .+|.++|..|.++|.+|.++.+.+.
T Consensus 30 ~~~vvIIGgG-~iG~E~A~~l~~~g~~Vtli~~~~~ 64 (121)
T d1d7ya2 30 QSRLLIVGGG-VIGLELAATARTAGVHVSLVETQPR 64 (121)
T ss_dssp TCEEEEECCS-HHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CCeEEEECcc-hhHHHHHHHhhcccceEEEEeeccc
Confidence 5788888765 9999999999999999999998764
|
| >d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Transcription corepressor CtbP species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]
Probab=95.52 E-value=0.042 Score=40.00 Aligned_cols=41 Identities=12% Similarity=0.211 Sum_probs=35.2
Q ss_pred CCCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcc
Q 025672 6 KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT 47 (249)
Q Consensus 6 ~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~ 47 (249)
....++||++.|.|. |.||+.+|+.+...|++|+..++...
T Consensus 43 ~~~eL~gktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~ 83 (193)
T d1mx3a1 43 GAARIRGETLGIIGL-GRVGQAVALRAKAFGFNVLFYDPYLS 83 (193)
T ss_dssp TCCCCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTSC
T ss_pred CceeeeCceEEEecc-ccccccceeeeeccccceeeccCccc
Confidence 345689999999975 69999999999999999999998644
|
| >d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH peroxidase species: Enterococcus faecalis [TaxId: 1351]
Probab=95.48 E-value=0.022 Score=38.22 Aligned_cols=36 Identities=17% Similarity=0.291 Sum_probs=30.9
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcc
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT 47 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~ 47 (249)
++|.++|.|| |.+|.++|..|.+.|.+|.++.+.+.
T Consensus 29 ~~k~vvViGg-G~iG~E~A~~l~~~g~~Vtlie~~~~ 64 (123)
T d1nhpa2 29 EVNNVVVIGS-GYIGIEAAEAFAKAGKKVTVIDILDR 64 (123)
T ss_dssp TCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CCCEEEEECC-hHHHHHHHHHhhccceEEEEEEecCc
Confidence 4678888876 49999999999999999999988653
|
| >d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Ta1320-like domain: Hypothetical protein Ta1320 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=95.44 E-value=0.018 Score=42.20 Aligned_cols=72 Identities=18% Similarity=0.172 Sum_probs=53.6
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHH
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 86 (249)
.+++||+||=.|+++|+ ++..++..|+ +|+.++.+++.++...+.+ .++.++.+|+.+.
T Consensus 45 ~dl~Gk~VLDlGcGtG~---l~i~a~~~ga~~V~~vDid~~a~~~ar~N~----~~~~~~~~D~~~l------------- 104 (197)
T d1ne2a_ 45 GNIGGRSVIDAGTGNGI---LACGSYLLGAESVTAFDIDPDAIETAKRNC----GGVNFMVADVSEI------------- 104 (197)
T ss_dssp TSSBTSEEEEETCTTCH---HHHHHHHTTBSEEEEEESCHHHHHHHHHHC----TTSEEEECCGGGC-------------
T ss_pred CCCCCCEEEEeCCCCcH---HHHHHHHcCCCcccccccCHHHHHHHHHcc----ccccEEEEehhhc-------------
Confidence 46889999999999883 4456777886 6999998877655444332 3678999998642
Q ss_pred hCCccEEEEcCCC
Q 025672 87 FGKLDILVNAAAG 99 (249)
Q Consensus 87 ~~~id~vi~~ag~ 99 (249)
-+++|+||.|+-+
T Consensus 105 ~~~fD~Vi~NPPf 117 (197)
T d1ne2a_ 105 SGKYDTWIMNPPF 117 (197)
T ss_dssp CCCEEEEEECCCC
T ss_pred CCcceEEEeCccc
Confidence 2589999999765
|
| >d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=95.34 E-value=0.026 Score=37.84 Aligned_cols=35 Identities=23% Similarity=0.419 Sum_probs=30.7
Q ss_pred CcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcc
Q 025672 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT 47 (249)
Q Consensus 12 ~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~ 47 (249)
.|.++|.||+ -||.++|..|.+.|.+|.++.+++.
T Consensus 23 p~~~vIiG~G-~ig~E~A~~l~~lG~~Vtii~~~~~ 57 (122)
T d1v59a2 23 PKRLTIIGGG-IIGLEMGSVYSRLGSKVTVVEFQPQ 57 (122)
T ss_dssp CSEEEEECCS-HHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCeEEEECCC-chHHHHHHHHHhhCcceeEEEeccc
Confidence 4788888864 8999999999999999999998654
|
| >d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: MraW-like putative methyltransferases domain: TM0872, methyltransferase domain species: Thermotoga maritima [TaxId: 2336]
Probab=95.34 E-value=0.02 Score=41.75 Aligned_cols=82 Identities=17% Similarity=0.078 Sum_probs=63.4
Q ss_pred CcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCcc
Q 025672 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD 91 (249)
Q Consensus 12 ~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 91 (249)
+.++=+|-|+||...++.+.+ . +.+|+.+|++++.++...+.+...+.++.++..+.++...+ .... ..+++|
T Consensus 25 ~~~lD~t~G~Gghs~~il~~~-~-~~~vi~~D~d~~~l~~a~~~l~~~~~r~~~~~~~f~~~~~~---~~~~--~~~~vd 97 (192)
T d1m6ya2 25 KIILDCTVGEGGHSRAILEHC-P-GCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYREADFL---LKTL--GIEKVD 97 (192)
T ss_dssp CEEEETTCTTSHHHHHHHHHC-T-TCEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCGGGHHHH---HHHT--TCSCEE
T ss_pred CEEEEecCCCcHHHHHHHhcC-C-CCeEEEeechHHHHHHHHHhhccccccccchhHHHhhHHHH---HHHc--CCCCcc
Confidence 456667888888888888876 3 46899999999999988888888888999999988875442 2211 135899
Q ss_pred EEEEcCCCC
Q 025672 92 ILVNAAAGN 100 (249)
Q Consensus 92 ~vi~~ag~~ 100 (249)
+|+...|+.
T Consensus 98 gIl~DlGvS 106 (192)
T d1m6ya2 98 GILMDLGVS 106 (192)
T ss_dssp EEEEECSCC
T ss_pred eeeeccchh
Confidence 999999864
|
| >d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=95.30 E-value=0.13 Score=35.02 Aligned_cols=76 Identities=11% Similarity=0.100 Sum_probs=52.8
Q ss_pred EEEEecCCCchhHHHHHHHHHc-CCeEEE-EeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCcc
Q 025672 14 VALLTGGGSGIGFEISLQLGKH-GAAIAI-MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD 91 (249)
Q Consensus 14 ~~lItGa~~giG~~~a~~l~~~-G~~v~l-~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 91 (249)
++.|.|++|.+|+.+++.+.+. +++++. +++... +.. +...+.. +-.|+|.++.+...++.+.+. ++-
T Consensus 1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~~-~~~----~~~~~~D---vvIDFS~p~~~~~~~~~~~~~--~~~ 70 (135)
T d1yl7a1 1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGDP-LSL----LTDGNTE---VVIDFTHPDVVMGNLEFLIDN--GIH 70 (135)
T ss_dssp EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTTCC-THH----HHTTTCS---EEEECCCTTTHHHHHHHHHHT--TCE
T ss_pred CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCc-hhh----hccccCC---EEEEcccHHHHHHHHHHHHhc--CCC
Confidence 4789999999999999987764 556553 555432 221 2222333 345999999999999988765 466
Q ss_pred EEEEcCCC
Q 025672 92 ILVNAAAG 99 (249)
Q Consensus 92 ~vi~~ag~ 99 (249)
+|+-..|+
T Consensus 71 ~ViGTTG~ 78 (135)
T d1yl7a1 71 AVVGTTGF 78 (135)
T ss_dssp EEECCCCC
T ss_pred EEEecccc
Confidence 78877773
|
| >d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Pyrroline-5-carboxylate reductase ProC species: Neisseria meningitidis, serogroup B [TaxId: 487]
Probab=95.28 E-value=0.015 Score=40.63 Aligned_cols=42 Identities=21% Similarity=0.212 Sum_probs=35.2
Q ss_pred EEEEecCCCchhHHHHHHHHHcC-CeEEEEeCCcchHHHHHHHH
Q 025672 14 VALLTGGGSGIGFEISLQLGKHG-AAIAIMGRRKTVLRSAVAAL 56 (249)
Q Consensus 14 ~~lItGa~~giG~~~a~~l~~~G-~~v~l~~r~~~~~~~~~~~~ 56 (249)
.+.+.|+ |-+|.++++.|.+.| ++|++++|++++.+.+.++.
T Consensus 2 kI~fIG~-G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~~ 44 (152)
T d1yqga2 2 NVYFLGG-GNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKEL 44 (152)
T ss_dssp EEEEECC-SHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHT
T ss_pred EEEEEcC-cHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhhc
Confidence 3667766 899999999999888 78999999998888777654
|
| >d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Phosphoglycerate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=95.24 E-value=0.091 Score=37.92 Aligned_cols=64 Identities=13% Similarity=0.081 Sum_probs=44.1
Q ss_pred CCCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchH-------HHHHHHHHhcCCCeeEEEccCCC
Q 025672 6 KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVL-------RSAVAALHSLGIPAIGLEGDVRK 72 (249)
Q Consensus 6 ~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~-------~~~~~~~~~~~~~~~~~~~Dl~~ 72 (249)
....+.++++.|.| .|.||+.+++.+...|++|+..++..... +.+.+-+.. +.+..+.+.+++
T Consensus 38 ~~~~l~~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~~~~l~ell~~--sDii~i~~plt~ 108 (188)
T d1sc6a1 38 GSFEARGKKLGIIG-YGHIGTQLGILAESLGMYVYFYDIENKLPLGNATQVQHLSDLLNM--SDVVSLHVPENP 108 (188)
T ss_dssp -CCCSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCCCCTTCEECSCHHHHHHH--CSEEEECCCSST
T ss_pred ccccccceEEEEee-cccchhhhhhhcccccceEeeccccccchhhhhhhhhhHHHHHhh--ccceeecccCCc
Confidence 34468899999995 56999999999999999999998754311 112222222 356667677765
|
| >d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Thiopurine S-methyltransferase domain: Thiopurine S-methyltransferase species: Pseudomonas syringae [TaxId: 317]
Probab=95.11 E-value=0.027 Score=40.42 Aligned_cols=76 Identities=13% Similarity=-0.006 Sum_probs=55.6
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhc-------------CCCeeEEEccCCCHHHHH
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL-------------GIPAIGLEGDVRKREDAV 77 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~-------------~~~~~~~~~Dl~~~~~~~ 77 (249)
.+.+||..|++.| ..+..|+++|++|+.+|.++..++...+..... +..+.++.+|..+.....
T Consensus 20 ~~~rvLd~GCG~G---~~a~~la~~G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~ 96 (201)
T d1pjza_ 20 PGARVLVPLCGKS---QDMSWLSGQGYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTARD 96 (201)
T ss_dssp TTCEEEETTTCCS---HHHHHHHHHCCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHHH
T ss_pred CCCEEEEecCcCC---HHHHHHHHcCCceEeecccHHHHHHHHHHhccccchhhhhhhhhccccccceeccccccccccc
Confidence 5889999999777 477799999999999999999888887776432 334567888887654311
Q ss_pred HHHHHHHHHhCCccEEEEcCC
Q 025672 78 RVVESTINHFGKLDILVNAAA 98 (249)
Q Consensus 78 ~~~~~~~~~~~~id~vi~~ag 98 (249)
. ...|.|+....
T Consensus 97 ~---------~~~D~i~~~~~ 108 (201)
T d1pjza_ 97 I---------GHCAAFYDRAA 108 (201)
T ss_dssp H---------HSEEEEEEESC
T ss_pred c---------cceeEEEEEee
Confidence 1 25677766544
|
| >d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Plasmodium falciparum [TaxId: 5833]
Probab=95.06 E-value=0.032 Score=37.06 Aligned_cols=35 Identities=23% Similarity=0.270 Sum_probs=30.4
Q ss_pred CcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcc
Q 025672 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT 47 (249)
Q Consensus 12 ~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~ 47 (249)
.|+++|.||. -+|.++|..|.+.|.+|.++.|...
T Consensus 22 p~~v~IiGgG-~iG~E~A~~l~~~g~~Vtlv~~~~~ 56 (117)
T d1onfa2 22 SKKIGIVGSG-YIAVELINVIKRLGIDSYIFARGNR 56 (117)
T ss_dssp CSEEEEECCS-HHHHHHHHHHHTTTCEEEEECSSSS
T ss_pred CCEEEEECCc-hHHHHHHHHHHhccccceeeehhcc
Confidence 4788888865 9999999999999999999998653
|
| >d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: CAC2371-like domain: Hypothetical methyltransferase PH1305 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=95.04 E-value=0.035 Score=41.69 Aligned_cols=73 Identities=19% Similarity=0.166 Sum_probs=58.1
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCc
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 90 (249)
+++++|=.|++.| .++..|+++|++|+.++.++.-++...+.+...+.++.++..|+.+.+- -+..
T Consensus 41 ~~~~iLDiGcGtG---~~~~~l~~~~~~v~gvD~s~~mi~~a~~~~~~~~~~i~~~~~d~~~l~~-----------~~~f 106 (251)
T d1wzna1 41 EVRRVLDLACGTG---IPTLELAERGYEVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEIAF-----------KNEF 106 (251)
T ss_dssp CCCEEEEETCTTC---HHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGCCC-----------CSCE
T ss_pred CCCEEEEeCCCCC---ccchhhcccceEEEEEeeccccccccccccccccccchheehhhhhccc-----------cccc
Confidence 4678999999877 4567799999999999999988888888877777789999999876431 1468
Q ss_pred cEEEEcC
Q 025672 91 DILVNAA 97 (249)
Q Consensus 91 d~vi~~a 97 (249)
|.|+..-
T Consensus 107 D~I~~~~ 113 (251)
T d1wzna1 107 DAVTMFF 113 (251)
T ss_dssp EEEEECS
T ss_pred chHhhhh
Confidence 9888753
|
| >d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Escherichia coli [TaxId: 562]
Probab=95.00 E-value=0.032 Score=36.98 Aligned_cols=35 Identities=20% Similarity=0.257 Sum_probs=30.0
Q ss_pred CcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcc
Q 025672 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT 47 (249)
Q Consensus 12 ~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~ 47 (249)
.|.++|.||. -+|.++|..|.+.|.+|.++.|.+.
T Consensus 21 p~~vvIiGgG-~ig~E~A~~l~~~G~~Vtlve~~~~ 55 (116)
T d1gesa2 21 PERVAVVGAG-YIGVELGGVINGLGAKTHLFEMFDA 55 (116)
T ss_dssp CSEEEEECCS-HHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCEEEEECCC-hhhHHHHHHhhccccEEEEEeecch
Confidence 3677888764 9999999999999999999998754
|
| >d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Hypothetical protein PH1109 species: Pyrococcus horikoshii [TaxId: 53953]
Probab=94.98 E-value=0.1 Score=35.69 Aligned_cols=86 Identities=12% Similarity=0.016 Sum_probs=58.8
Q ss_pred CCcEEEEecCC---CchhHHHHHHHHHcCCeEEEEeCCcchHH--HHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHH
Q 025672 11 KGKVALLTGGG---SGIGFEISLQLGKHGAAIAIMGRRKTVLR--SAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN 85 (249)
Q Consensus 11 ~~k~~lItGa~---~giG~~~a~~l~~~G~~v~l~~r~~~~~~--~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 85 (249)
+.|++.|.|+| +..|..+++.|.+.|++|+.+..+..... .....+.+....+..+.+ +...+.+..+++++.+
T Consensus 18 ~~ksIAVVGaS~~~~~~g~~v~~~L~~~g~~v~pVnP~~~~i~G~~~~~sl~dlp~~iD~v~i-~vp~~~~~~~~~e~~~ 96 (139)
T d2d59a1 18 RYKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKYEEVLGRKCYPSVLDIPDKIEVVDL-FVKPKLTMEYVEQAIK 96 (139)
T ss_dssp HCCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEETTEECBSSGGGCSSCCSEEEE-CSCHHHHHHHHHHHHH
T ss_pred cCCeEEEEeecCCCCCchHHHHHHHHHCCCEEEEECCcccccCCCcccccccccCccceEEEE-EeCHHHHHHHHHHHHH
Confidence 57999999999 57999999999999999999876644321 122222222333333221 3556778888888876
Q ss_pred HhCCccEEEEcCCC
Q 025672 86 HFGKLDILVNAAAG 99 (249)
Q Consensus 86 ~~~~id~vi~~ag~ 99 (249)
. .+..++...|.
T Consensus 97 ~--g~k~v~~~~G~ 108 (139)
T d2d59a1 97 K--GAKVVWFQYNT 108 (139)
T ss_dssp H--TCSEEEECTTC
T ss_pred h--CCCEEEEeccc
Confidence 5 36788888874
|
| >d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.97 E-value=0.038 Score=37.13 Aligned_cols=35 Identities=23% Similarity=0.331 Sum_probs=30.7
Q ss_pred CcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcc
Q 025672 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT 47 (249)
Q Consensus 12 ~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~ 47 (249)
.|.++|.||. -||.++|..|.+.|.+|.++.|+..
T Consensus 22 pk~vvIvGgG-~iG~E~A~~l~~~G~~Vtlv~~~~~ 56 (125)
T d3grsa2 22 PGRSVIVGAG-YIAVEMAGILSALGSKTSLMIRHDK 56 (125)
T ss_dssp CSEEEEECCS-HHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCEEEEEcCC-ccHHHHHHHHhcCCcEEEEEeeccc
Confidence 4788898876 7999999999999999999998643
|
| >d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: S-adenosylhomocystein hydrolase species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.78 E-value=0.036 Score=39.14 Aligned_cols=39 Identities=26% Similarity=0.342 Sum_probs=34.8
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcc
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT 47 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~ 47 (249)
..+.||+++|.|- |-||+.+|+.|...|++|++++.++.
T Consensus 20 ~~l~Gk~v~V~Gy-G~iG~g~A~~~rg~G~~V~v~e~dp~ 58 (163)
T d1li4a1 20 VMIAGKVAVVAGY-GDVGKGCAQALRGFGARVIITEIDPI 58 (163)
T ss_dssp CCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred ceecCCEEEEecc-ccccHHHHHHHHhCCCeeEeeecccc
Confidence 4688999999975 58999999999999999999999764
|
| >d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: C-terminal domain of adrenodoxin reductase-like domain: Trimethylamine dehydrogenase, C-terminal domain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=94.69 E-value=0.062 Score=37.33 Aligned_cols=36 Identities=14% Similarity=0.198 Sum_probs=29.3
Q ss_pred CcEEEEe-cCCCchhHHHHHHHHHcCCeEEEEeCCcc
Q 025672 12 GKVALLT-GGGSGIGFEISLQLGKHGAAIAIMGRRKT 47 (249)
Q Consensus 12 ~k~~lIt-Ga~~giG~~~a~~l~~~G~~v~l~~r~~~ 47 (249)
++.++|. .+++.||.++|..|+++|++|.++.+...
T Consensus 39 ~~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~~ 75 (156)
T d1djqa2 39 GKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVHL 75 (156)
T ss_dssp CSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSCT
T ss_pred CCceEEEecCCChHHHHHHHHHHHcCCeEEEEecCCc
Confidence 4555554 46689999999999999999999988654
|
| >d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Azotobacter vinelandii [TaxId: 354]
Probab=94.66 E-value=0.071 Score=35.35 Aligned_cols=35 Identities=20% Similarity=0.326 Sum_probs=30.6
Q ss_pred CcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcc
Q 025672 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT 47 (249)
Q Consensus 12 ~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~ 47 (249)
.+.++|.||+ -||.++|..|++.|.+|.++.++..
T Consensus 22 p~~i~IiG~G-~ig~E~A~~l~~~G~~Vtiv~~~~~ 56 (119)
T d3lada2 22 PGKLGVIGAG-VIGLELGSVWARLGAEVTVLEAMDK 56 (119)
T ss_dssp CSEEEEECCS-HHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CCeEEEECCC-hHHHHHHHHHHHcCCceEEEEeecc
Confidence 5788899865 9999999999999999999987654
|
| >d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH oxidase /nitrite reductase species: Pyrococcus furiosus [TaxId: 2261]
Probab=94.60 E-value=0.04 Score=36.81 Aligned_cols=35 Identities=26% Similarity=0.452 Sum_probs=29.8
Q ss_pred CcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcc
Q 025672 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT 47 (249)
Q Consensus 12 ~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~ 47 (249)
+|.++|.|| |.+|.++|..|.+.|.+|.++.|++.
T Consensus 32 ~~~vvIiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~~ 66 (122)
T d1xhca2 32 SGEAIIIGG-GFIGLELAGNLAEAGYHVKLIHRGAM 66 (122)
T ss_dssp HSEEEEEEC-SHHHHHHHHHHHHTTCEEEEECSSSC
T ss_pred CCcEEEECC-cHHHHHHHHHhhcccceEEEEecccc
Confidence 367788776 59999999999999999999998653
|
| >d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Formate dehydrogenase species: Pseudomonas sp., strain 101 [TaxId: 306]
Probab=94.55 E-value=0.11 Score=37.50 Aligned_cols=64 Identities=9% Similarity=0.034 Sum_probs=44.9
Q ss_pred CCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHH----------HHHHhcCCCeeEEEccCCC
Q 025672 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAV----------AALHSLGIPAIGLEGDVRK 72 (249)
Q Consensus 7 ~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~----------~~~~~~~~~~~~~~~Dl~~ 72 (249)
...++++++.|.| .|.||+++++.|...|.+|+..++......... +++- ....+..+.+.+++
T Consensus 39 ~~~l~~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~~~~~~~~l~~~l-~~sD~v~~~~plt~ 112 (188)
T d2naca1 39 AYDLEAMHVGTVA-AGRIGLAVLRRLAPFDVHLHYTDRHRLPESVEKELNLTWHATREDMY-PVCDVVTLNCPLHP 112 (188)
T ss_dssp CCCCTTCEEEEEC-CSHHHHHHHHHHGGGTCEEEEECSSCCCHHHHHHHTCEECSSHHHHG-GGCSEEEECSCCCT
T ss_pred ceeccccceeecc-ccccchhhhhhhhccCceEEEEeeccccccccccccccccCCHHHHH-Hhccchhhcccccc
Confidence 4568899999998 458999999999999999999998643222111 1111 13456677777766
|
| >d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: CAC2371-like domain: Putative methyltransferase CAC2371 species: Clostridium acetobutylicum [TaxId: 1488]
Probab=94.55 E-value=0.038 Score=41.55 Aligned_cols=75 Identities=16% Similarity=0.068 Sum_probs=60.0
Q ss_pred CCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCC
Q 025672 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK 89 (249)
Q Consensus 10 l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 89 (249)
.+++++|=.|++.|. ++..|+++|.+|+.+|.++.-++...+.+...+.++.++..|+.+.+ ..++
T Consensus 36 ~~~~~vLDiGCG~G~---~~~~l~~~g~~v~GvD~S~~ml~~A~~~~~~~~~~v~~~~~d~~~~~-----------~~~~ 101 (246)
T d1y8ca_ 36 LVFDDYLDLACGTGN---LTENLCPKFKNTWAVDLSQEMLSEAENKFRSQGLKPRLACQDISNLN-----------INRK 101 (246)
T ss_dssp CCTTEEEEETCTTST---THHHHGGGSSEEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGGCC-----------CSCC
T ss_pred CCCCeEEEEeCcCCH---HHHHHHHhCCccEeeccchhhhhhccccccccCccceeeccchhhhc-----------cccc
Confidence 457889999999885 78899999999999999998888877777777778999999987642 1247
Q ss_pred ccEEEEcCC
Q 025672 90 LDILVNAAA 98 (249)
Q Consensus 90 id~vi~~ag 98 (249)
.|+|+...+
T Consensus 102 fD~i~~~~~ 110 (246)
T d1y8ca_ 102 FDLITCCLD 110 (246)
T ss_dssp EEEEEECTT
T ss_pred ccccceeee
Confidence 899886543
|
| >d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Ribosomal protein L11 methyltransferase PrmA domain: PrmA-like protein TTHA0656 (TT0836) species: Thermus thermophilus [TaxId: 274]
Probab=94.54 E-value=0.14 Score=38.76 Aligned_cols=73 Identities=29% Similarity=0.379 Sum_probs=55.5
Q ss_pred CCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCC
Q 025672 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK 89 (249)
Q Consensus 10 l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 89 (249)
.+|+++|=.|+.+|+ ++..+++.|++|+.+|.++..++...+.....+....++..|+.+ .+ ..++
T Consensus 119 ~~g~~VLDiGcGsG~---l~i~aa~~g~~V~gvDis~~av~~A~~na~~n~~~~~~~~~d~~~------~~-----~~~~ 184 (254)
T d2nxca1 119 RPGDKVLDLGTGSGV---LAIAAEKLGGKALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLEA------AL-----PFGP 184 (254)
T ss_dssp CTTCEEEEETCTTSH---HHHHHHHTTCEEEEEESCGGGHHHHHHHHHHTTCCCEEEESCHHH------HG-----GGCC
T ss_pred CccCEEEEcccchhH---HHHHHHhcCCEEEEEECChHHHHHHHHHHHHcCCceeEEeccccc------cc-----cccc
Confidence 468999999999886 345677889999999999998888887776666677777776421 11 2368
Q ss_pred ccEEEEc
Q 025672 90 LDILVNA 96 (249)
Q Consensus 90 id~vi~~ 96 (249)
.|+|+.|
T Consensus 185 fD~V~an 191 (254)
T d2nxca1 185 FDLLVAN 191 (254)
T ss_dssp EEEEEEE
T ss_pred cchhhhc
Confidence 9999877
|
| >d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=94.44 E-value=0.052 Score=35.76 Aligned_cols=35 Identities=26% Similarity=0.517 Sum_probs=29.8
Q ss_pred CcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcc
Q 025672 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT 47 (249)
Q Consensus 12 ~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~ 47 (249)
.|.++|.|| |-+|.++|..|.+.|.+|.++.+.+.
T Consensus 21 p~~vvIiGg-G~~G~E~A~~l~~~g~~Vtlve~~~~ 55 (115)
T d1lvla2 21 PQHLVVVGG-GYIGLELGIAYRKLGAQVSVVEARER 55 (115)
T ss_dssp CSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred CCeEEEECC-CHHHHHHHHHHhhcccceEEEeeecc
Confidence 477788775 59999999999999999999988644
|
| >d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Maltose-6'-phosphate glucosidase GlvA species: Bacillus subtilis [TaxId: 1423]
Probab=94.43 E-value=0.5 Score=33.15 Aligned_cols=120 Identities=16% Similarity=0.110 Sum_probs=63.8
Q ss_pred CcEEEEecCCCchhH-HHHHHHHHc-----CCeEEEEeCCcchHHHHHHHHHh----cCCCeeEEEccCCCHHHHHHHHH
Q 025672 12 GKVALLTGGGSGIGF-EISLQLGKH-----GAAIAIMGRRKTVLRSAVAALHS----LGIPAIGLEGDVRKREDAVRVVE 81 (249)
Q Consensus 12 ~k~~lItGa~~giG~-~~a~~l~~~-----G~~v~l~~r~~~~~~~~~~~~~~----~~~~~~~~~~Dl~~~~~~~~~~~ 81 (249)
...+.|.||++ +|. .+...++.+ +.+++|.|.++++++.....+.. .+....+... +|. ++
T Consensus 3 ~~KI~iIGaGs-v~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~~~~~--~d~---~e--- 73 (167)
T d1u8xx1 3 SFSIVIAGGGS-TFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAAT--TDP---EE--- 73 (167)
T ss_dssp CEEEEEECTTS-SSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEE--SCH---HH---
T ss_pred CceEEEECCCh-hhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHHhCCCcceEec--CCh---hh---
Confidence 34577788855 443 333444432 23799999999988755555432 1333332211 122 11
Q ss_pred HHHHHhCCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhh----------------HHHHHHHHHHHHHHHhcCCCCCCC
Q 025672 82 STINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS----------------VGTFIMCHEALKYLKKGGRGQASS 145 (249)
Q Consensus 82 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~----------------~~~~~l~~~~~~~~~~~~~~~~~~ 145 (249)
.+..-|+||+.+|.... ...+-+..+..|+ .-....++-+.+.+.+..+
T Consensus 74 ----al~~AD~Vvitag~~~~------~g~~rd~~i~~~~Gi~~~~t~g~gg~~~~~r~i~ii~~i~~~i~~~~P----- 138 (167)
T d1u8xx1 74 ----AFTDVDFVMAHIRVGKY------AMRALDEQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEILDYMEKYSP----- 138 (167)
T ss_dssp ----HHSSCSEEEECCCTTHH------HHHHHHHHHHHTTTCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCT-----
T ss_pred ----ccCCCCEEEECCCcCCC------CceeHHHhhchhcCceeeccccCcchheehhhHHHHHHHHHHHHhhCC-----
Confidence 22467999999986431 1122223333331 2234455666777766554
Q ss_pred CCCceEEEeccc
Q 025672 146 SSGGIIINISAT 157 (249)
Q Consensus 146 ~~~g~iv~iss~ 157 (249)
.+-++++|..
T Consensus 139 --~A~li~~TNP 148 (167)
T d1u8xx1 139 --DAWMLNYSNP 148 (167)
T ss_dssp --TCEEEECCSC
T ss_pred --CeEEEEeCCH
Confidence 3666676664
|
| >d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Glycerol-3- phosphate dehydrogenase species: Trypanosome (Leishmania mexicana) [TaxId: 5665]
Probab=94.42 E-value=0.021 Score=41.60 Aligned_cols=41 Identities=17% Similarity=0.307 Sum_probs=33.7
Q ss_pred cEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHH
Q 025672 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVA 54 (249)
Q Consensus 13 k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~ 54 (249)
+.+.|.|++ ..|.++|..|++.|++|.+.+|+++..+.+.+
T Consensus 8 ~KI~ViGaG-~wGtAlA~~La~~g~~V~l~~r~~~~~~~i~~ 48 (189)
T d1n1ea2 8 NKAVVFGSG-AFGTALAMVLSKKCREVCVWHMNEEEVRLVNE 48 (189)
T ss_dssp EEEEEECCS-HHHHHHHHHHHTTEEEEEEECSCHHHHHHHHH
T ss_pred ceEEEECCC-HHHHHHHHHHHHcCCeEEEEEecHHHHHHHhh
Confidence 457888865 68999999999999999999999876655443
|
| >d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Garden pea (Pisum sativum) [TaxId: 3888]
Probab=94.41 E-value=0.056 Score=36.11 Aligned_cols=35 Identities=23% Similarity=0.428 Sum_probs=30.9
Q ss_pred CcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcc
Q 025672 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT 47 (249)
Q Consensus 12 ~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~ 47 (249)
.|.++|.||. -||.++|..|.+.|.+|.++.|++.
T Consensus 25 p~~~viiG~G-~iglE~A~~~~~~G~~Vtvi~~~~~ 59 (123)
T d1dxla2 25 PKKLVVIGAG-YIGLEMGSVWGRIGSEVTVVEFASE 59 (123)
T ss_dssp CSEEEESCCS-HHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred CCeEEEEccc-hHHHHHHHHHHhcCCeEEEEEEccc
Confidence 4788888865 9999999999999999999998765
|
| >d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: D-aminoacid oxidase, N-terminal domain domain: D-aminoacid oxidase, N-terminal domain species: Rhodotorula gracilis [TaxId: 5286]
Probab=94.38 E-value=0.031 Score=41.86 Aligned_cols=35 Identities=29% Similarity=0.500 Sum_probs=30.4
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCc
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK 46 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~ 46 (249)
+.|.|+|+||. -.|..+|.+|.++|++|.+++|+.
T Consensus 5 ~~~kVvVIGaG-iaGl~~A~~L~~~G~~V~vier~~ 39 (268)
T d1c0pa1 5 SQKRVVVLGSG-VIGLSSALILARKGYSVHILARDL 39 (268)
T ss_dssp CSCEEEEECCS-HHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCcEEEECcc-HHHHHHHHHHHHCCCCEEEEeCCC
Confidence 45678898875 889999999999999999999864
|
| >d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Pyrroline-5-carboxylate reductase ProC species: Streptococcus pyogenes [TaxId: 1314]
Probab=94.32 E-value=0.031 Score=38.98 Aligned_cols=41 Identities=15% Similarity=0.093 Sum_probs=34.9
Q ss_pred EEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHH
Q 025672 15 ALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAAL 56 (249)
Q Consensus 15 ~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~ 56 (249)
+.|. |.|-+|.++++.|.+.|+++++.+|+.++.+++.++.
T Consensus 3 Ig~I-G~G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~~~ 43 (152)
T d2ahra2 3 IGII-GVGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQL 43 (152)
T ss_dssp EEEE-CCSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHH
T ss_pred EEEE-eccHHHHHHHHHHHhCCCeEEEEcChHHhHHhhcccc
Confidence 4555 4679999999999999999999999988888777665
|
| >d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Thermotoga maritima [TaxId: 2336]
Probab=94.31 E-value=0.16 Score=31.82 Aligned_cols=68 Identities=22% Similarity=0.280 Sum_probs=45.7
Q ss_pred EEEEecCCCchhH-HHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCccE
Q 025672 14 VALLTGGGSGIGF-EISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI 92 (249)
Q Consensus 14 ~~lItGa~~giG~-~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ 92 (249)
++-++| -+|+|. ++|+.|.++|++|...|++... ..+.+++.|.++.. .-|..+ ....|.
T Consensus 3 ~ihfiG-IgG~GMs~LA~~L~~~G~~VsGSD~~~~~---~t~~L~~~Gi~i~~-gh~~~~--------------i~~~d~ 63 (89)
T d1j6ua1 3 KIHFVG-IGGIGMSAVALHEFSNGNDVYGSNIEETE---RTAYLRKLGIPIFV-PHSADN--------------WYDPDL 63 (89)
T ss_dssp EEEEET-TTSHHHHHHHHHHHHTTCEEEEECSSCCH---HHHHHHHTTCCEES-SCCTTS--------------CCCCSE
T ss_pred EEEEEe-ECHHHHHHHHHHHHhCCCeEEEEeCCCCh---hHHHHHHCCCeEEe-eecccc--------------cCCCCE
Confidence 455555 458887 8899999999999999988643 23346666655432 122222 135899
Q ss_pred EEEcCCCC
Q 025672 93 LVNAAAGN 100 (249)
Q Consensus 93 vi~~ag~~ 100 (249)
||...++.
T Consensus 64 vV~SsAI~ 71 (89)
T d1j6ua1 64 VIKTPAVR 71 (89)
T ss_dssp EEECTTCC
T ss_pred EEEecCcC
Confidence 99998864
|
| >d2fr1a2 c.2.1.2 (A:1448-1656) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Erythromycin synthase, eryAI, 1st ketoreductase module species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=94.12 E-value=0.66 Score=33.39 Aligned_cols=143 Identities=15% Similarity=0.115 Sum_probs=74.3
Q ss_pred CCCcEEEEecCC--CchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 10 LKGKVALLTGGG--SGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 10 l~~k~~lItGa~--~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
..++++++.... .....+++..|...|..++.+.-+.. .+.+ .+.+ .....
T Consensus 23 ~~g~~lv~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~-----------------------~~~~---~l~~-~~~~~ 75 (209)
T d2fr1a2 23 LDGTWLVAKYAGTADETSTAAREALESAGARVRELVVDAR-----------------------CGRD---ELAE-RLRSV 75 (209)
T ss_dssp CCSEEEEEECTTSSHHHHHHHHHHHHTTSCEEEEEECCTT-----------------------CCHH---HHHH-HHTTS
T ss_pred CCCcEEEEeCCCCchHHHHHHHHHHHhCCCeEEEecCCCc-----------------------cCHH---HHHH-Hhhcc
Confidence 445555554332 34666777888888887766543322 1122 2222 22344
Q ss_pred CCccEEEEcCCCCCCCCCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCccch
Q 025672 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 167 (249)
Q Consensus 88 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~ 167 (249)
+.++.||+..+...... ... ......+...+.++|++... .. ..++.+++...... .....
T Consensus 76 ~~~~~vv~l~~~~~~~~-~~~------~~~~~~~~~~l~l~qal~~~---~~--------~~~l~~vT~~a~~~-~~~d~ 136 (209)
T d2fr1a2 76 GEVAGVLSLLAVDEAEP-EEA------PLALASLADTLSLVQAMVSA---EL--------GCPLWTVTESAVAT-GPFER 136 (209)
T ss_dssp CCCSEEEECTTTTCCCC-SSC------GGGCHHHHHHHHHHHHHHHT---TC--------CCCEEEEEESCSCS-STTSC
T ss_pred CCCCeEEEeCCCCCCCC-cch------hHHHHHHHHHHHHHHHHHhC---CC--------CCcEEEEEcCCccc-CCCcc
Confidence 67899998766432211 111 11122355556666665421 11 14455554432111 11122
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEe
Q 025672 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIA 199 (249)
Q Consensus 168 ~y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~ 199 (249)
.-....+++.+|.|+++.|+- ...++...+.
T Consensus 137 ~~~p~~A~l~Gl~r~~~~E~P-~l~~~~vDl~ 167 (209)
T d2fr1a2 137 VRNAAHGALWGVGRVIALENP-AVWGGLVDVP 167 (209)
T ss_dssp CSCGGGHHHHHHHHHHHHHCG-GGEEEEEEEC
T ss_pred cCCHhHHhHHHHHHHHHHhCC-CceEEEEECC
Confidence 234568899999999999985 4344454443
|
| >d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Putative formate dehydrogenase species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]
Probab=94.04 E-value=0.062 Score=38.64 Aligned_cols=39 Identities=23% Similarity=0.371 Sum_probs=34.7
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcc
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT 47 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~ 47 (249)
..++||++.|.|.. .||+.+++.+...|++|+..+|...
T Consensus 38 ~~l~gk~vgIiG~G-~IG~~va~~l~~~g~~v~~~d~~~~ 76 (181)
T d1qp8a1 38 PLIQGEKVAVLGLG-EIGTRVGKILAALGAQVRGFSRTPK 76 (181)
T ss_dssp CCCTTCEEEEESCS-THHHHHHHHHHHTTCEEEEECSSCC
T ss_pred CcccCceEEEeccc-cccccceeeeecccccccccccccc
Confidence 35899999999876 6999999999999999999998754
|
| >d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase species: Xanthobacter sp., py2 [TaxId: 35809]
Probab=94.02 E-value=0.1 Score=34.48 Aligned_cols=37 Identities=16% Similarity=0.300 Sum_probs=32.0
Q ss_pred CCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcc
Q 025672 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT 47 (249)
Q Consensus 10 l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~ 47 (249)
..+|.++|.||+ -||.++|..|.+.|.+|.++.|++.
T Consensus 20 ~~~~~vvVvGgG-~ig~E~A~~l~~~g~~vt~i~~~~~ 56 (121)
T d1mo9a2 20 EPGSTVVVVGGS-KTAVEYGCFFNATGRRTVMLVRTEP 56 (121)
T ss_dssp CCCSEEEEECCS-HHHHHHHHHHHHTTCEEEEECSSCT
T ss_pred CCCCEEEEECCC-HHHHHHHHHHHhcchhheEeeccch
Confidence 357898888865 9999999999999999999998654
|
| >d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Mammalian thioredoxin reductase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=94.00 E-value=0.062 Score=35.86 Aligned_cols=33 Identities=21% Similarity=0.267 Sum_probs=28.6
Q ss_pred CcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCC
Q 025672 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR 45 (249)
Q Consensus 12 ~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~ 45 (249)
.+.++|.||. -||.++|..|.+.|.+|.++.|+
T Consensus 20 P~~vvIIGgG-~iG~E~A~~l~~lG~~Vtii~~~ 52 (122)
T d1h6va2 20 PGKTLVVGAS-YVALECAGFLAGIGLDVTVMVRS 52 (122)
T ss_dssp CCSEEEECCS-HHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCeEEEECCC-ccHHHHHHHHhhcCCeEEEEEec
Confidence 3667888765 99999999999999999999875
|
| >d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=94.00 E-value=0.13 Score=38.00 Aligned_cols=77 Identities=19% Similarity=0.202 Sum_probs=59.9
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcC-CCeeEEEccCCCHHHHHHHHHHHHHHhCC
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG-IPAIGLEGDVRKREDAVRVVESTINHFGK 89 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 89 (249)
++.+||.+|+.+|--.++..+|+ |.+|+.++++++-.+...+.+...+ .++.++..|..+- ....++
T Consensus 78 ~g~~VLeIGsGsGY~taila~l~--g~~V~~ie~~~~l~~~a~~~l~~~g~~nv~~~~gd~~~g----------~~~~~p 145 (215)
T d1jg1a_ 78 PGMNILEVGTGSGWNAALISEIV--KTDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSKG----------FPPKAP 145 (215)
T ss_dssp TTCCEEEECCTTSHHHHHHHHHH--CSCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGC----------CGGGCC
T ss_pred ccceEEEecCCCChhHHHHHHhh--CceeEEEeccHHHHHHHHHHHHHcCCceeEEEECccccC----------CcccCc
Confidence 47789999999998888888777 5679999999887777777777665 5789999998641 122368
Q ss_pred ccEEEEcCCC
Q 025672 90 LDILVNAAAG 99 (249)
Q Consensus 90 id~vi~~ag~ 99 (249)
.|.++.+++.
T Consensus 146 fD~Iiv~~a~ 155 (215)
T d1jg1a_ 146 YDVIIVTAGA 155 (215)
T ss_dssp EEEEEECSBB
T ss_pred ceeEEeeccc
Confidence 9999988775
|
| >d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Ubiquitin activating enzymes (UBA) domain: Amyloid beta precursor protein-binding protein 1, APPBP1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.90 E-value=0.023 Score=48.18 Aligned_cols=34 Identities=24% Similarity=0.272 Sum_probs=29.3
Q ss_pred CCCcEEEEecCCCchhHHHHHHHHHcCC-eEEEEeC
Q 025672 10 LKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGR 44 (249)
Q Consensus 10 l~~k~~lItGa~~giG~~~a~~l~~~G~-~v~l~~r 44 (249)
|+..+|+|.|+ ||+|.++++.|+..|. +++++|.
T Consensus 23 L~~s~VlvvG~-gglG~Ei~knLvl~GVg~itivD~ 57 (529)
T d1yova1 23 LESAHVCLINA-TATGTEILKNLVLPGIGSFTIIDG 57 (529)
T ss_dssp HHHCEEEECCC-SHHHHHHHHHHHTTTCSEEEEECC
T ss_pred HhCCCEEEECC-CHHHHHHHHHHHHhcCCEEEEEcC
Confidence 45678999987 6999999999999997 6888875
|
| >d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Putidaredoxin reductase species: Pseudomonas putida [TaxId: 303]
Probab=93.89 E-value=0.08 Score=35.87 Aligned_cols=36 Identities=19% Similarity=0.362 Sum_probs=31.5
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcc
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT 47 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~ 47 (249)
++|+++|.||+ -+|.++|..|.+.|.+|.++.+.+.
T Consensus 34 ~~k~v~VIGgG-~iG~E~A~~l~~~g~~Vtvie~~~~ 69 (133)
T d1q1ra2 34 ADNRLVVIGGG-YIGLEVAATAIKANMHVTLLDTAAR 69 (133)
T ss_dssp TTCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred cCCEEEEECCc-hHHHHHHHHHHhhCcceeeeeeccc
Confidence 46888999764 9999999999999999999998654
|
| >d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: CAC2371-like domain: Hypothetical protein PH0226 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=93.82 E-value=0.14 Score=37.37 Aligned_cols=75 Identities=19% Similarity=0.078 Sum_probs=58.0
Q ss_pred CcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCcc
Q 025672 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD 91 (249)
Q Consensus 12 ~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 91 (249)
+.+||=.|++.|. ++..|++.|++|+.+|.+++.++...+.+...+..+.++..|..+..- ..+..|
T Consensus 38 ~~~ILDiGcG~G~---~~~~la~~~~~v~giD~S~~~i~~ak~~~~~~~~~~~~~~~d~~~l~~----------~~~~fD 104 (226)
T d1ve3a1 38 RGKVLDLACGVGG---FSFLLEDYGFEVVGVDISEDMIRKAREYAKSRESNVEFIVGDARKLSF----------EDKTFD 104 (226)
T ss_dssp CCEEEEETCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTSCCS----------CTTCEE
T ss_pred CCEEEEECCCcch---hhhhHhhhhcccccccccccchhhhhhhhccccccccccccccccccc----------cCcCce
Confidence 4578999998875 667888999999999999888888877777767778888888876420 114789
Q ss_pred EEEEcCCC
Q 025672 92 ILVNAAAG 99 (249)
Q Consensus 92 ~vi~~ag~ 99 (249)
+|+.....
T Consensus 105 ~I~~~~~l 112 (226)
T d1ve3a1 105 YVIFIDSI 112 (226)
T ss_dssp EEEEESCG
T ss_pred EEEEecch
Confidence 99887553
|
| >d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Precorrin-6Y methyltransferase (CbiT) domain: Precorrin-6Y methyltransferase (CbiT) species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]
Probab=93.73 E-value=0.23 Score=35.41 Aligned_cols=75 Identities=23% Similarity=0.352 Sum_probs=55.2
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcC--CCeeEEEccCCCHHHHHHHHHHHHHHhC
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG--IPAIGLEGDVRKREDAVRVVESTINHFG 88 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 88 (249)
++.++|=.|+.+| .++..|++.+.+|+.++.+++.++...+.+...+ .++.++++|..+ ......
T Consensus 33 ~g~~VLDiGcGsG---~~s~~lA~~~~~V~avD~~~~~l~~a~~n~~~~gl~~~v~~~~gda~~----------~~~~~~ 99 (186)
T d1l3ia_ 33 KNDVAVDVGCGTG---GVTLELAGRVRRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPE----------ALCKIP 99 (186)
T ss_dssp TTCEEEEESCTTS---HHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHH----------HHTTSC
T ss_pred CCCEEEEEECCeE---cccccccccceEEEEecCCHHHHHHHHHHHHHcCCCcceEEEECchhh----------cccccC
Confidence 4778888888777 4455677778899999999998888888887665 578999887421 112235
Q ss_pred CccEEEEcCC
Q 025672 89 KLDILVNAAA 98 (249)
Q Consensus 89 ~id~vi~~ag 98 (249)
.+|.++.+.+
T Consensus 100 ~~D~v~~~~~ 109 (186)
T d1l3ia_ 100 DIDIAVVGGS 109 (186)
T ss_dssp CEEEEEESCC
T ss_pred CcCEEEEeCc
Confidence 7899987654
|
| >d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: hypothetical RNA methyltransferase domain: Hypothetical protein TTHA1280, middle and C-terminal domains species: Thermus thermophilus [TaxId: 274]
Probab=93.73 E-value=0.36 Score=37.67 Aligned_cols=82 Identities=18% Similarity=0.154 Sum_probs=56.5
Q ss_pred CCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcC-CCeeEEEccCCCHHHHHHHHHHHHHHhC
Q 025672 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG-IPAIGLEGDVRKREDAVRVVESTINHFG 88 (249)
Q Consensus 10 l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 88 (249)
.+|++||=.++..| |.++ +++..|.+|+.++.++..++...+.+...| ..+.++..|..+. .+...+...
T Consensus 144 ~~g~rVLDl~~gtG-~~s~--~~a~g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~~i~~d~~~~------~~~~~~~~~ 214 (318)
T d1wxxa2 144 FRGERALDVFSYAG-GFAL--HLALGFREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDL------LRRLEKEGE 214 (318)
T ss_dssp CCEEEEEEETCTTT-HHHH--HHHHHEEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHH------HHHHHHTTC
T ss_pred hCCCeeeccCCCCc-HHHH--HHHhcCCcEEeecchHHHHHHHHHHHHHcCCCCcceeeccHHHH------hhhhHhhhc
Confidence 46888887776654 3333 345567789999999998888888776555 3578888876542 223333346
Q ss_pred CccEEEEcCCCC
Q 025672 89 KLDILVNAAAGN 100 (249)
Q Consensus 89 ~id~vi~~ag~~ 100 (249)
+.|.||.++...
T Consensus 215 ~fD~Vi~DpP~~ 226 (318)
T d1wxxa2 215 RFDLVVLDPPAF 226 (318)
T ss_dssp CEEEEEECCCCS
T ss_pred CCCEEEEcCCcc
Confidence 899999987643
|
| >d2esra1 c.66.1.46 (A:28-179) Putative methyltransferase SPy1538 {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: YhhF-like domain: Putative methyltransferase SPy1538 species: Streptococcus pyogenes [TaxId: 1314]
Probab=93.67 E-value=0.41 Score=32.87 Aligned_cols=78 Identities=13% Similarity=0.175 Sum_probs=54.3
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhcC--CCeeEEEccCCCHHHHHHHHHHHHH
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLG--IPAIGLEGDVRKREDAVRVVESTIN 85 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~ 85 (249)
.++|+++|=.|+.+| .++.+.+.+|+ +|+.++.+++..+.+.+.+...+ .++.+++.|..+ ++. .
T Consensus 12 ~~~g~~vlDl~~GtG---~~~iea~~rga~~v~~ve~~~~a~~~~~~n~~~~~~~~~~~ii~~D~~~------~l~---~ 79 (152)
T d2esra1 12 YFNGGRVLDLFAGSG---GLAIEAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAER------AID---C 79 (152)
T ss_dssp CCCSCEEEEETCTTC---HHHHHHHHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHH------HHH---H
T ss_pred hCCCCeEEEcCCccC---HHHHHHHHhCcceeeeehhchhhhhhhhhhhhhcccccchhhhcccccc------ccc---c
Confidence 478888887777665 24445567887 79999999888777777776443 468889888532 222 2
Q ss_pred HhCCccEEEEcCC
Q 025672 86 HFGKLDILVNAAA 98 (249)
Q Consensus 86 ~~~~id~vi~~ag 98 (249)
..++.|+|+.++.
T Consensus 80 ~~~~fDiIf~DPP 92 (152)
T d2esra1 80 LTGRFDLVFLDPP 92 (152)
T ss_dssp BCSCEEEEEECCS
T ss_pred cccccceeEechh
Confidence 2357899988764
|
| >d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: 2,4-dienoyl-CoA reductase, middle domain species: Escherichia coli [TaxId: 562]
Probab=93.58 E-value=0.068 Score=38.36 Aligned_cols=38 Identities=13% Similarity=0.358 Sum_probs=32.9
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcc
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT 47 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~ 47 (249)
..++|.++|+||. --|.+.|..|+++|++|+++.++..
T Consensus 40 ~~~~k~V~IIGaG-PAGL~AA~~la~~G~~Vtl~E~~~~ 77 (179)
T d1ps9a3 40 AVQKKNLAVVGAG-PAGLAFAINAAARGHQVTLFDAHSE 77 (179)
T ss_dssp CSSCCEEEEECCS-HHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred CCCCcEEEEECcc-HHHHHHHHHHHhhccceEEEeccCc
Confidence 3567999999875 7899999999999999999998654
|
| >d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Thiopurine S-methyltransferase domain: Thiopurine S-methyltransferase species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.57 E-value=0.055 Score=40.24 Aligned_cols=77 Identities=9% Similarity=0.011 Sum_probs=55.4
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHh------------------cCCCeeEEEccCCC
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHS------------------LGIPAIGLEGDVRK 72 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~------------------~~~~~~~~~~Dl~~ 72 (249)
.+.+||..|+..| ..+..|+++|++|+.+|-++..++...++... .+.++.++.+|+.+
T Consensus 45 ~~~rvLd~GCG~G---~~a~~LA~~G~~V~gvD~S~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~ 121 (229)
T d2bzga1 45 SGLRVFFPLCGKA---VEMKWFADRGHSVVGVEISELGIQEFFTEQNLSYSEEPITEIPGTKVFKSSSGNISLYCCSIFD 121 (229)
T ss_dssp CSCEEEETTCTTC---THHHHHHHTTCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCGGG
T ss_pred CCCEEEEeCCCCc---HHHHHHHhCCCcEEEEeCCHHHHHHHHHHhhccccccchhcccccceeeecCCcEEEEEcchhh
Confidence 5789999999877 45888999999999999998887776665432 13467888888765
Q ss_pred HHHHHHHHHHHHHHhCCccEEEEcCCC
Q 025672 73 REDAVRVVESTINHFGKLDILVNAAAG 99 (249)
Q Consensus 73 ~~~~~~~~~~~~~~~~~id~vi~~ag~ 99 (249)
... ...+..|+|+.....
T Consensus 122 l~~---------~~~~~fd~i~~~~~l 139 (229)
T d2bzga1 122 LPR---------TNIGKFDMIWDRGAL 139 (229)
T ss_dssp GGG---------SCCCCEEEEEESSST
T ss_pred ccc---------cccCceeEEEEEEEE
Confidence 432 112457777765543
|
| >d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: S-adenosylhomocystein hydrolase species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]
Probab=93.38 E-value=0.091 Score=36.87 Aligned_cols=40 Identities=18% Similarity=0.267 Sum_probs=35.3
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcch
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTV 48 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~ 48 (249)
..+.||+++|.| -|-+|+.+|++|...|++|+++..++-.
T Consensus 19 ~~laGk~vvV~G-YG~vGrG~A~~~rg~Ga~V~V~E~DPi~ 58 (163)
T d1v8ba1 19 FLISGKIVVICG-YGDVGKGCASSMKGLGARVYITEIDPIC 58 (163)
T ss_dssp CCCTTSEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSCHHH
T ss_pred ceecCCEEEEec-ccccchhHHHHHHhCCCEEEEEecCchh
Confidence 568899999987 5689999999999999999999988743
|
| >d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Hypothetical protein PF0725 species: Pyrococcus furiosus [TaxId: 2261]
Probab=93.37 E-value=0.44 Score=31.20 Aligned_cols=84 Identities=12% Similarity=0.069 Sum_probs=54.1
Q ss_pred cEEEEecCC---CchhHHHHHHHHHcCCeEEEEeCCcchHH--HHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 13 KVALLTGGG---SGIGFEISLQLGKHGAAIAIMGRRKTVLR--SAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 13 k~~lItGa~---~giG~~~a~~l~~~G~~v~l~~r~~~~~~--~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
|++.|.|+| +..|..+.+.|.+.|++|+.+..+.+... .....+.+....+..+. =....+.+..+++++.+.
T Consensus 2 KsIAVvGaS~~~~k~g~~v~~~L~~~g~~V~pVnP~~~~i~G~~~y~sl~~lp~~~D~vv-i~vp~~~~~~~l~~~~~~- 79 (116)
T d1y81a1 2 RKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDEIEGLKCYRSVRELPKDVDVIV-FVVPPKVGLQVAKEAVEA- 79 (116)
T ss_dssp CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEETTEECBSSGGGSCTTCCEEE-ECSCHHHHHHHHHHHHHT-
T ss_pred cEEEEEcccCCCCCcHHHHHHHHHHCCCEEEEEccccccccCccccccchhccccceEEE-EEeCHHHHHHHHHHHHhc-
Confidence 789999999 56899999999999999998876544321 11222222223333321 235566777888777654
Q ss_pred CCccEEEEcCCC
Q 025672 88 GKLDILVNAAAG 99 (249)
Q Consensus 88 ~~id~vi~~ag~ 99 (249)
.+..++...|.
T Consensus 80 -g~k~v~~~~g~ 90 (116)
T d1y81a1 80 -GFKKLWFQPGA 90 (116)
T ss_dssp -TCCEEEECTTS
T ss_pred -CCceEEeccch
Confidence 35677776663
|
| >d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase species: Escherichia coli [TaxId: 562]
Probab=93.34 E-value=0.56 Score=32.27 Aligned_cols=52 Identities=12% Similarity=0.015 Sum_probs=33.9
Q ss_pred cEEEEecCCCchhHHHHHHHHHcC--CeEEEEeCCcchHHHHHHHHHhcCCCeeE
Q 025672 13 KVALLTGGGSGIGFEISLQLGKHG--AAIAIMGRRKTVLRSAVAALHSLGIPAIG 65 (249)
Q Consensus 13 k~~lItGa~~giG~~~a~~l~~~G--~~v~l~~r~~~~~~~~~~~~~~~~~~~~~ 65 (249)
|++.|.|+||.||.....-+.+.. ++|+.+.-+. ..+.+.+++....++..+
T Consensus 2 K~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~-N~~~L~~q~~~f~pk~v~ 55 (151)
T d1q0qa2 2 KQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGK-NVTRMVEQCLEFSPRYAV 55 (151)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESS-CHHHHHHHHHHHCCSEEE
T ss_pred CeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEecC-cHHHHHHHHHHHhhcccc
Confidence 579999999999999999888763 5766543222 234444454444444433
|
| >d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Nitrogenase iron protein-like domain: Dethiobiotin synthetase species: Escherichia coli [TaxId: 562]
Probab=93.27 E-value=0.035 Score=40.63 Aligned_cols=32 Identities=19% Similarity=0.130 Sum_probs=28.2
Q ss_pred cEEEEecCCCchhH-----HHHHHHHHcCCeEEEEeC
Q 025672 13 KVALLTGGGSGIGF-----EISLQLGKHGAAIAIMGR 44 (249)
Q Consensus 13 k~~lItGa~~giG~-----~~a~~l~~~G~~v~l~~r 44 (249)
|+++|||...|+|+ .+|..|+++|++|.+++-
T Consensus 2 ~~~~i~gt~~GVGKTtvs~~La~aLa~~G~rVl~id~ 38 (224)
T d1byia_ 2 KRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYKP 38 (224)
T ss_dssp EEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEECS
T ss_pred ceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEECc
Confidence 78999999999998 567899999999999863
|
| >d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Neisseria meningitidis [TaxId: 487]
Probab=93.16 E-value=0.081 Score=35.46 Aligned_cols=35 Identities=23% Similarity=0.385 Sum_probs=30.4
Q ss_pred CcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcc
Q 025672 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT 47 (249)
Q Consensus 12 ~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~ 47 (249)
.+.++|.||+ -||.++|..|.+.|.+|.++.+...
T Consensus 26 p~~vvIiGgG-~IG~E~A~~~~~~G~~Vtive~~~~ 60 (125)
T d1ojta2 26 PGKLLIIGGG-IIGLEMGTVYSTLGSRLDVVEMMDG 60 (125)
T ss_dssp CSEEEEESCS-HHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred CCeEEEECCC-HHHHHHHHHhhcCCCEEEEEEeecc
Confidence 5788888865 9999999999999999999987543
|
| >d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Dihydropyrimidine dehydrogenase, domain 2 species: Pig (Sus scrofa) [TaxId: 9823]
Probab=93.09 E-value=0.041 Score=39.47 Aligned_cols=35 Identities=20% Similarity=0.296 Sum_probs=30.1
Q ss_pred CcEEEEecCCCchhHHHHHHHHHcCCe-EEEEeCCcc
Q 025672 12 GKVALLTGGGSGIGFEISLQLGKHGAA-IAIMGRRKT 47 (249)
Q Consensus 12 ~k~~lItGa~~giG~~~a~~l~~~G~~-v~l~~r~~~ 47 (249)
+|+|+|+||. -.|..+|..|.++|++ |+++.++..
T Consensus 4 ~~kVaIIGaG-paGl~aA~~l~~~G~~~V~v~E~~~~ 39 (196)
T d1gtea4 4 SAKIALLGAG-PASISCASFLARLGYSDITIFEKQEY 39 (196)
T ss_dssp GCCEEEECCS-HHHHHHHHHHHHTTCCCEEEEESSSS
T ss_pred CCEEEEECCh-HHHHHHHHHHHHCCCCeEEEEEecCc
Confidence 6888999875 8999999999999995 999988644
|
| >d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Conserved hypothetical protein MTH1747 species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]
Probab=92.98 E-value=0.083 Score=36.55 Aligned_cols=37 Identities=8% Similarity=0.067 Sum_probs=30.1
Q ss_pred EEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHH
Q 025672 15 ALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSA 52 (249)
Q Consensus 15 ~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~ 52 (249)
+-|.| .|-+|.++++.|.++|++|+..+++..+....
T Consensus 3 IgiIG-~G~mG~~ia~~l~~~g~~v~~~~~~~~~~~~~ 39 (152)
T d1i36a2 3 VGFIG-FGEVAQTLASRLRSRGVEVVTSLEGRSPSTIE 39 (152)
T ss_dssp EEEES-CSHHHHHHHHHHHHTTCEEEECCTTCCHHHHH
T ss_pred EEEEc-HHHHHHHHHHHHHHCCCeEEEEcCchhHHHHH
Confidence 45564 58999999999999999999998877665443
|
| >d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Arginine methyltransferase domain: Protein arginine N-methyltransferase 3, PRMT3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.96 E-value=0.23 Score=38.55 Aligned_cols=76 Identities=25% Similarity=0.351 Sum_probs=53.9
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHh--cCCCeeEEEccCCCHHHHHHHHHHHHH
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHS--LGIPAIGLEGDVRKREDAVRVVESTIN 85 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 85 (249)
.+++|+||-.|++.|+ ++..+++.|+ +|+.++.++. .....+.... ...++.++..|+.+...
T Consensus 33 ~~~~~~VLDiGcG~G~---lsl~aa~~Ga~~V~aid~s~~-~~~a~~~~~~~~~~~~i~~~~~~~~~l~~---------- 98 (311)
T d2fyta1 33 IFKDKVVLDVGCGTGI---LSMFAAKAGAKKVLGVDQSEI-LYQAMDIIRLNKLEDTITLIKGKIEEVHL---------- 98 (311)
T ss_dssp GTTTCEEEEETCTTSH---HHHHHHHTTCSEEEEEESSTH-HHHHHHHHHHTTCTTTEEEEESCTTTSCC----------
T ss_pred cCCcCEEEEECCCCCH---HHHHHHHcCCCEEEEEeCHHH-HHHHHHHHHHhCCCccceEEEeeHHHhcC----------
Confidence 4689999999999886 6777888997 6999998764 3334444333 24578999999887532
Q ss_pred HhCCccEEEEcCC
Q 025672 86 HFGKLDILVNAAA 98 (249)
Q Consensus 86 ~~~~id~vi~~ag 98 (249)
...++|+||...-
T Consensus 99 ~~~~~D~Ivse~~ 111 (311)
T d2fyta1 99 PVEKVDVIISEWM 111 (311)
T ss_dssp SCSCEEEEEECCC
T ss_pred ccccceEEEEeee
Confidence 1247899987543
|
| >d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Protoporphyrinogen oxidase species: Tobacco (Nicotiana tabacum) [TaxId: 4097]
Probab=92.95 E-value=0.051 Score=41.35 Aligned_cols=34 Identities=21% Similarity=0.384 Sum_probs=29.3
Q ss_pred CcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCc
Q 025672 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK 46 (249)
Q Consensus 12 ~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~ 46 (249)
+|+|+|+||. --|...|.+|+++|++|+++.++.
T Consensus 1 ~KkV~IIGaG-~aGL~aA~~La~~G~~V~vlE~~~ 34 (373)
T d1seza1 1 AKRVAVIGAG-VSGLAAAYKLKIHGLNVTVFEAEG 34 (373)
T ss_dssp CCEEEEECCS-HHHHHHHHHHHTTSCEEEEECSSS
T ss_pred CCEEEEECcC-HHHHHHHHHHHhCCCCEEEEeCCC
Confidence 5889999875 668999999999999999998754
|
| >d1nv8a_ c.66.1.30 (A:) N5-glutamine methyltransferase, HemK {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: N5-glutamine methyltransferase, HemK domain: N5-glutamine methyltransferase, HemK species: Thermotoga maritima [TaxId: 2336]
Probab=92.92 E-value=0.42 Score=36.41 Aligned_cols=78 Identities=14% Similarity=0.147 Sum_probs=53.6
Q ss_pred cEEEEecCCCch-hHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcC--CCeeEEEccCCCHHHHHHHHHHHHHHhCC
Q 025672 13 KVALLTGGGSGI-GFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG--IPAIGLEGDVRKREDAVRVVESTINHFGK 89 (249)
Q Consensus 13 k~~lItGa~~gi-G~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 89 (249)
++++-.|+++|+ +..++ + ...++|+.++.+++.++-..+-....+ .++.++..|+.+. ..+.+++
T Consensus 112 ~~vld~g~GsG~i~~~la-~--~~~~~v~a~Dis~~Al~~A~~Na~~~~~~~~~~i~~~~~~~~---------~~~~~~~ 179 (271)
T d1nv8a_ 112 KTVADIGTGSGAIGVSVA-K--FSDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEP---------FKEKFAS 179 (271)
T ss_dssp CEEEEESCTTSHHHHHHH-H--HSSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGG---------GGGGTTT
T ss_pred cEEEEeeeeeehhhhhhh-h--cccceeeechhhhhHHHHHHHHHHHcCCCceeEEeecccccc---------cccccCc
Confidence 456656666554 44443 2 356789999999988877776665544 4677888888754 2233478
Q ss_pred ccEEEEcCCCCCC
Q 025672 90 LDILVNAAAGNFL 102 (249)
Q Consensus 90 id~vi~~ag~~~~ 102 (249)
+|+||.|+-+.+.
T Consensus 180 fDlIVsNPPYI~~ 192 (271)
T d1nv8a_ 180 IEMILSNPPYVKS 192 (271)
T ss_dssp CCEEEECCCCBCG
T ss_pred ccEEEEcccccCc
Confidence 9999999987653
|
| >d1u0sy_ c.23.1.1 (Y:) CheY protein {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: CheY-like family: CheY-related domain: CheY protein species: Thermotoga maritima [TaxId: 2336]
Probab=92.90 E-value=0.72 Score=30.02 Aligned_cols=82 Identities=15% Similarity=0.154 Sum_probs=55.5
Q ss_pred CcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCcc
Q 025672 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD 91 (249)
Q Consensus 12 ~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 91 (249)
||++||.--..-+-..+...|-+.|++|+....+..+ ..+.+......+.++..++-+.+- -.+++++++..+.+-
T Consensus 1 GkrILivDD~~~~~~~l~~~L~~~g~~v~~~a~~~~~---al~~~~~~~~dliilD~~mp~~~G-~e~~~~ir~~~~~~p 76 (118)
T d1u0sy_ 1 GKRVLIVDDAAFMRMMLKDIITKAGYEVAGEATNGRE---AVEKYKELKPDIVTMDITMPEMNG-IDAIKEIMKIDPNAK 76 (118)
T ss_dssp CCEEEEECSCHHHHHHHHHHHHHTTCEEEEEESSHHH---HHHHHHHHCCSEEEEECSCGGGCH-HHHHHHHHHHCTTCC
T ss_pred CCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCHHH---HHHHHHhccCCEEEEecCCCCCCH-HHHHHHHHHhCCCCc
Confidence 7899999999999999999999999998766555433 333333334456665555555433 355666777666677
Q ss_pred EEEEcC
Q 025672 92 ILVNAA 97 (249)
Q Consensus 92 ~vi~~a 97 (249)
+++..+
T Consensus 77 vi~ls~ 82 (118)
T d1u0sy_ 77 IIVCSA 82 (118)
T ss_dssp EEEEEC
T ss_pred EEEEEc
Confidence 776654
|
| >d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Clostridium symbiosum [TaxId: 1512]
Probab=92.89 E-value=0.069 Score=40.62 Aligned_cols=36 Identities=25% Similarity=0.397 Sum_probs=31.3
Q ss_pred CCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEe
Q 025672 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMG 43 (249)
Q Consensus 7 ~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~ 43 (249)
..+++||+++|.| .|.+|..+++.|.+.|++|+.++
T Consensus 31 ~~~l~g~~v~IQG-fGnVG~~~a~~L~e~Gakvvavs 66 (255)
T d1bgva1 31 NDTLVGKTVALAG-FGNVAWGAAKKLAELGAKAVTLS 66 (255)
T ss_dssp TCCSTTCEEEECC-SSHHHHHHHHHHHHHTCEEEEEE
T ss_pred CCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEe
Confidence 3468999999998 78999999999999999987653
|
| >d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: hypothetical RNA methyltransferase domain: Hypothetical protein PH1915, middle and C-terminal domains species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=92.84 E-value=0.7 Score=36.02 Aligned_cols=79 Identities=16% Similarity=0.104 Sum_probs=52.9
Q ss_pred CcEEEEecCCCchhHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhcC--CCeeEEEccCCCHHHHHHHHHHHHHHhC
Q 025672 12 GKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLG--IPAIGLEGDVRKREDAVRVVESTINHFG 88 (249)
Q Consensus 12 ~k~~lItGa~~giG~~~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 88 (249)
|++||=.++..|. ++..++..|+ +|+.++.++..++...+.+...| .++.++..|+.+ ......+...
T Consensus 146 g~~VLDl~~g~G~---~si~~a~~ga~~V~~vD~s~~al~~a~~N~~~ngl~~~~~~~~~d~~~------~~~~~~~~~~ 216 (324)
T d2as0a2 146 GDRVLDVFTYTGG---FAIHAAIAGADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFE------EMEKLQKKGE 216 (324)
T ss_dssp TCEEEETTCTTTH---HHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHH------HHHHHHHTTC
T ss_pred CCeeecccCcccc---hhhhhhhcCCcEEEeecCCHHHHHHHHHHHHHcCCCccceeeechhhh------hhHHHHhccC
Confidence 7888877765442 2334456777 79999999998888777775444 367788777642 2233333446
Q ss_pred CccEEEEcCCC
Q 025672 89 KLDILVNAAAG 99 (249)
Q Consensus 89 ~id~vi~~ag~ 99 (249)
+.|+||.++..
T Consensus 217 ~fD~Vi~DpP~ 227 (324)
T d2as0a2 217 KFDIVVLDPPA 227 (324)
T ss_dssp CEEEEEECCCC
T ss_pred CCCchhcCCcc
Confidence 89999998764
|
| >d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase species: Zymomonas mobilis [TaxId: 542]
Probab=92.70 E-value=0.19 Score=34.71 Aligned_cols=55 Identities=7% Similarity=0.111 Sum_probs=37.7
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHc--CCeEEEEeCCcchHHHHHHHHHhcCCCeeEE
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKH--GAAIAIMGRRKTVLRSAVAALHSLGIPAIGL 66 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~--G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~ 66 (249)
+.|++.|.|+||.||.....-+.+. .++|+.+.-+. ..+.+.+++....++..++
T Consensus 1 ~pK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~-N~~~L~~q~~ef~Pk~v~i 57 (150)
T d1r0ka2 1 QPRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANR-NVKDLADAAKRTNAKRAVI 57 (150)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESS-CHHHHHHHHHHTTCSEEEE
T ss_pred CCcEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeCC-CHHHHHHHHHhhcccccee
Confidence 4689999999999999998888765 46777654332 3455555555555554443
|
| >d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Glycerol-3- phosphate dehydrogenase species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=92.68 E-value=0.055 Score=38.78 Aligned_cols=75 Identities=12% Similarity=0.174 Sum_probs=46.3
Q ss_pred EEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCC----CeeEEEccCCCHHHHHHHHHHHHHHhCC
Q 025672 14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGI----PAIGLEGDVRKREDAVRVVESTINHFGK 89 (249)
Q Consensus 14 ~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~----~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 89 (249)
.+.|.|+ |..|.++|..|++.|.+|.+.+|+.+ ++..+.+..... ....-..++.-.++++.+++ .
T Consensus 2 kI~ViGa-G~~GtalA~~la~~g~~V~l~~r~~~--~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-------~ 71 (180)
T d1txga2 2 IVSILGA-GAMGSALSVPLVDNGNEVRIWGTEFD--TEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLE-------N 71 (180)
T ss_dssp EEEEESC-CHHHHHHHHHHHHHCCEEEEECCGGG--HHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHT-------T
T ss_pred EEEEECC-CHHHHHHHHHHHHCCCEEEEEEeccc--HHHHHHHhhhhhhhhhcchhccccccccccHHHHHh-------c
Confidence 4677776 68999999999999999999998655 344555543211 11111112222344444443 4
Q ss_pred ccEEEEcCC
Q 025672 90 LDILVNAAA 98 (249)
Q Consensus 90 id~vi~~ag 98 (249)
.|+||.+..
T Consensus 72 ad~Ii~avp 80 (180)
T d1txga2 72 AEVVLLGVS 80 (180)
T ss_dssp CSEEEECSC
T ss_pred cchhhcccc
Confidence 688888553
|
| >d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: TehB-like domain: Putative methyltransferase TehB species: Salmonella typhimurium [TaxId: 90371]
Probab=92.61 E-value=0.33 Score=34.76 Aligned_cols=76 Identities=16% Similarity=0.119 Sum_probs=55.8
Q ss_pred CCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCC-CeeEEEccCCCHHHHHHHHHHHHHHhC
Q 025672 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGI-PAIGLEGDVRKREDAVRVVESTINHFG 88 (249)
Q Consensus 10 l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 88 (249)
+++.++|=.|++.| + .+..|+++|++|+.++.++..++.+.+.....+. .+.+...|+.+..- -+
T Consensus 29 ~~~grvLDiGcG~G--~-~~~~la~~g~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~d~~~~~~-----------~~ 94 (198)
T d2i6ga1 29 VAPGRTLDLGCGNG--R-NSLYLAANGYDVTAWDKNPASMANLERIKAAEGLDNLQTDLVDLNTLTF-----------DG 94 (198)
T ss_dssp SCSCEEEEETCTTS--H-HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCTTEEEEECCTTTCCC-----------CC
T ss_pred CCCCcEEEECCCCC--H-HHHHHHHHhhhhccccCcHHHHHHHHHHhhhccccchhhhheecccccc-----------cc
Confidence 45678899998654 3 5678899999999999999888887776665553 47788888775431 14
Q ss_pred CccEEEEcCCC
Q 025672 89 KLDILVNAAAG 99 (249)
Q Consensus 89 ~id~vi~~ag~ 99 (249)
..|+|+.+.-.
T Consensus 95 ~fD~I~~~~~~ 105 (198)
T d2i6ga1 95 EYDFILSTVVM 105 (198)
T ss_dssp CEEEEEEESCG
T ss_pred cccEEEEeeee
Confidence 68999876643
|
| >d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Pyrobaculum islandicum [TaxId: 2277]
Probab=92.57 E-value=0.072 Score=40.19 Aligned_cols=35 Identities=23% Similarity=0.308 Sum_probs=30.9
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEe
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMG 43 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~ 43 (249)
.+++||+++|-| .|.+|..+|+.|.+.|++|+.++
T Consensus 27 ~~l~g~~v~IqG-fGnVG~~~a~~L~~~Gakvv~vs 61 (242)
T d1v9la1 27 GGIEGKTVAIQG-MGNVGRWTAYWLEKMGAKVIAVS 61 (242)
T ss_dssp SCCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEE
T ss_pred CCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEee
Confidence 368999999986 78999999999999999988655
|
| >d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=92.47 E-value=0.18 Score=37.71 Aligned_cols=82 Identities=18% Similarity=0.176 Sum_probs=48.8
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHH-cCCeEEEEeC------Ccch--HHHHHHHHHhcCCCeeEEEccCCCHHHHHH
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGK-HGAAIAIMGR------RKTV--LRSAVAALHSLGIPAIGLEGDVRKREDAVR 78 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~-~G~~v~l~~r------~~~~--~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~ 78 (249)
.++++++++|-| .|.+|+.+++.|.+ .|++|+.++- +++. .+.+.+.....+..+.+...+.-+.++
T Consensus 27 ~~l~g~~vaIqG-~GnVG~~~a~~L~~e~Ga~vv~vsd~~G~i~~~~Gld~~~l~~~~~~~~~~~~~~~~~~~~~~~--- 102 (234)
T d1b26a1 27 IDPKKATVAVQG-FGNVGQFAALLISQELGSKVVAVSDSRGGIYNPEGFDVEELIRYKKEHGTVVTYPKGERITNEE--- 102 (234)
T ss_dssp CCTTTCEEEEEC-CSHHHHHHHHHHHHHHCCEEEEEEETTEEEECTTCCCHHHHHHHHHHSSCSTTCSSCEEECHHH---
T ss_pred CCcCCCEEEEEC-CCHHHHHHHHHHHHhcCCceEEeecCCCcEEeccccchHHHHHHHHhhcceeccccceeecccc---
Confidence 468999988876 78999999999975 6999876542 2222 233333333333322222222222222
Q ss_pred HHHHHHHHhCCccEEEEcCCC
Q 025672 79 VVESTINHFGKLDILVNAAAG 99 (249)
Q Consensus 79 ~~~~~~~~~~~id~vi~~ag~ 99 (249)
++. -+.|+++=||..
T Consensus 103 ~~~------~~~DI~~PcA~~ 117 (234)
T d1b26a1 103 LLE------LDVDILVPAALE 117 (234)
T ss_dssp HHT------SCCSEEEECSCT
T ss_pred ccc------cccceeecchhc
Confidence 221 278999998764
|
| >d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-glycerate dehydrogenase species: Hyphomicrobium methylovorum [TaxId: 84]
Probab=92.44 E-value=0.19 Score=36.29 Aligned_cols=42 Identities=17% Similarity=0.204 Sum_probs=35.7
Q ss_pred CCCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcch
Q 025672 6 KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTV 48 (249)
Q Consensus 6 ~~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~ 48 (249)
....++||++.|.|. |.||+.+++.+...|++|+..++....
T Consensus 41 ~~~~l~g~tvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~ 82 (191)
T d1gdha1 41 VGEKLDNKTLGIYGF-GSIGQALAKRAQGFDMDIDYFDTHRAS 82 (191)
T ss_dssp CBCCCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSCCC
T ss_pred ccceecccceEEeec-ccchHHHHHHHHhhccccccccccccc
Confidence 445678999999985 599999999999999999999886553
|
| >d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Trypanothione reductase species: Trypanosoma cruzi [TaxId: 5693]
Probab=92.33 E-value=0.18 Score=33.09 Aligned_cols=35 Identities=17% Similarity=0.222 Sum_probs=27.1
Q ss_pred CcEEEEecCCCchhHHHHHHHHH---cCCeEEEEeCCcc
Q 025672 12 GKVALLTGGGSGIGFEISLQLGK---HGAAIAIMGRRKT 47 (249)
Q Consensus 12 ~k~~lItGa~~giG~~~a~~l~~---~G~~v~l~~r~~~ 47 (249)
.+.++|.|| |.+|.++|..|.+ +|.+|.++.+.+.
T Consensus 20 p~~v~ivGg-G~ig~E~A~~l~~l~~~~~~Vtli~~~~~ 57 (117)
T d1aoga2 20 PRRVLTVGG-GFISVEFAGIFNAYKPKDGQVTLCYRGEM 57 (117)
T ss_dssp CSEEEEECS-SHHHHHHHHHHHHHCCTTCEEEEEESSSS
T ss_pred CCeEEEECC-cHHHHHHHHHhhhcccCCcEEEEEeccch
Confidence 578899988 6999999976655 4557999987543
|
| >d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Thermotoga maritima [TaxId: 2336]
Probab=92.21 E-value=0.31 Score=35.64 Aligned_cols=79 Identities=19% Similarity=0.226 Sum_probs=56.8
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcC-CCeeEEEccCCCHHHHHHHHHHHHHHhCC
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG-IPAIGLEGDVRKREDAVRVVESTINHFGK 89 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 89 (249)
.|.+||-+|+.+|--..+..++...+.+|+.++.+++.++...+.+...+ .++.++..|..+.. ...++
T Consensus 75 ~g~~VLdiG~GtG~~s~~la~~~~~~g~V~~id~~~~~~~~a~~~~~~~~~~n~~~~~~d~~~~~----------~~~~~ 144 (213)
T d1dl5a1 75 KGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGV----------PEFSP 144 (213)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCC----------GGGCC
T ss_pred ccceEEEecCccchhHHHHHHHhCCCCcEEEeecchhhHHHhhhhHhhhcccccccccCchHHcc----------ccccc
Confidence 47789999988887666655555556689999999998888888887654 35667777755311 12257
Q ss_pred ccEEEEcCCC
Q 025672 90 LDILVNAAAG 99 (249)
Q Consensus 90 id~vi~~ag~ 99 (249)
.|.|+.+++.
T Consensus 145 fD~I~~~~~~ 154 (213)
T d1dl5a1 145 YDVIFVTVGV 154 (213)
T ss_dssp EEEEEECSBB
T ss_pred hhhhhhhccH
Confidence 9999988764
|
| >d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=92.19 E-value=0.47 Score=32.62 Aligned_cols=82 Identities=12% Similarity=0.079 Sum_probs=54.5
Q ss_pred EEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhc------CCCeeEEEccCCCHHHHHHHHHHHHHHhC
Q 025672 15 ALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL------GIPAIGLEGDVRKREDAVRVVESTINHFG 88 (249)
Q Consensus 15 ~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~------~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 88 (249)
+-+.|- |-+|..+|++|++.|+.+ ...|+.++.++..++.... -....++-..+.+.+.+......+.+...
T Consensus 3 Ig~IGl-G~MG~~ma~~L~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~v~~~~~~l~~~~~ 80 (156)
T d2cvza2 3 VAFIGL-GAMGYPMAGHLARRFPTL-VWNRTFEKALRHQEEFGSEAVPLERVAEARVIFTCLPTTREVYEVAEALYPYLR 80 (156)
T ss_dssp EEEECC-STTHHHHHHHHHTTSCEE-EECSSTHHHHHHHHHHCCEECCGGGGGGCSEEEECCSSHHHHHHHHHHHTTTCC
T ss_pred EEEEeH-HHHHHHHHHHHHhCCCEE-EEeCCHHHHHHHHHHcCCcccccccccceeEEEecccchhhhhhhhcccccccc
Confidence 455665 799999999999888654 5788877777666655211 01233444567777788877777766555
Q ss_pred CccEEEEcCC
Q 025672 89 KLDILVNAAA 98 (249)
Q Consensus 89 ~id~vi~~ag 98 (249)
+-.++|.+..
T Consensus 81 ~~~~iid~sT 90 (156)
T d2cvza2 81 EGTYWVDATS 90 (156)
T ss_dssp TTEEEEECSC
T ss_pred cccccccccc
Confidence 5566666654
|
| >d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Nitrogenase iron protein-like domain: Cell division regulator MinD species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=92.19 E-value=0.08 Score=39.10 Aligned_cols=34 Identities=24% Similarity=0.532 Sum_probs=30.1
Q ss_pred CcEEEEecCCCchhH-----HHHHHHHHcCCeEEEEeCC
Q 025672 12 GKVALLTGGGSGIGF-----EISLQLGKHGAAIAIMGRR 45 (249)
Q Consensus 12 ~k~~lItGa~~giG~-----~~a~~l~~~G~~v~l~~r~ 45 (249)
+|++.|+|+-||+|+ .+|..|+++|.+|.++|-+
T Consensus 2 ~~vIav~~~kGGvGKTtia~nLA~~la~~g~~VlliD~D 40 (237)
T d1g3qa_ 2 GRIISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGD 40 (237)
T ss_dssp CEEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CeEEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeCC
Confidence 689999999999998 4677888999999999865
|
| >d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Cow (Bos taurus) [TaxId: 9913]
Probab=92.12 E-value=0.11 Score=40.20 Aligned_cols=36 Identities=19% Similarity=0.220 Sum_probs=31.2
Q ss_pred CCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEe
Q 025672 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMG 43 (249)
Q Consensus 7 ~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~ 43 (249)
..+++||+++|-|- |.+|..+|+.|.+.|++|+.++
T Consensus 31 ~~~L~gktvaIqGf-GnVG~~~A~~L~e~Gakvv~vs 66 (293)
T d1hwxa1 31 TPGFGDKTFAVQGF-GNVGLHSMRYLHRFGAKCVAVG 66 (293)
T ss_dssp CSSSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEE
Confidence 35689999988875 7999999999999999988765
|
| >d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: 6-phospho-beta-glucosidase species: Thermotoga maritima [TaxId: 2336]
Probab=92.09 E-value=0.81 Score=31.72 Aligned_cols=74 Identities=12% Similarity=-0.052 Sum_probs=41.0
Q ss_pred EEEEecCCCchhHHHHHH-HHHc-----CCeEEEEeCCcchHHHHHHHHHhc-CCCeeEEEccCCCHHHHHHHHHHHHHH
Q 025672 14 VALLTGGGSGIGFEISLQ-LGKH-----GAAIAIMGRRKTVLRSAVAALHSL-GIPAIGLEGDVRKREDAVRVVESTINH 86 (249)
Q Consensus 14 ~~lItGa~~giG~~~a~~-l~~~-----G~~v~l~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 86 (249)
.+.|.||.+ +|..++-. |++. +.+++|.|.++++++...+..... .....+. .- ++.+ +.
T Consensus 2 KIaiIGaGs-~g~~~~~~~l~~~~~~~~~~el~L~Did~~k~~~~~d~~~~~~~~~~~~~-~t-~~~~---~~------- 68 (162)
T d1up7a1 2 RIAVIGGGS-SYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKRLVKDRFKVL-IS-DTFE---GA------- 68 (162)
T ss_dssp EEEEETTTC-TTHHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHHHHHHHHHHTTSSEEE-EC-SSHH---HH-------
T ss_pred EEEEECCCH-HHHHHHHHHHHhcccccCccEEEEEecCcHHHHHHHHHHHhhhccCceEE-Ee-cCcc---cc-------
Confidence 467888854 66655533 3322 347999999998876544333321 1122221 11 2221 11
Q ss_pred hCCccEEEEcCCCC
Q 025672 87 FGKLDILVNAAAGN 100 (249)
Q Consensus 87 ~~~id~vi~~ag~~ 100 (249)
...-|+||..+|..
T Consensus 69 l~~aDvVVita~~~ 82 (162)
T d1up7a1 69 VVDAKYVIFQFRPG 82 (162)
T ss_dssp HTTCSEEEECCCTT
T ss_pred cCCCCEEEEecccC
Confidence 23579999999853
|
| >d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Acetate-CoA ligase alpha chain, AcdA, N-terminal domain species: Pyrococcus horikoshii [TaxId: 53953]
Probab=91.98 E-value=0.22 Score=33.46 Aligned_cols=92 Identities=10% Similarity=0.041 Sum_probs=58.2
Q ss_pred CCCCCCcEEEEecCC---CchhHHHHHHHHHcC-CeEEEEeCCcchHH--HHHHHHHhcCCCeeEEEccCCCHHHHHHHH
Q 025672 7 GDILKGKVALLTGGG---SGIGFEISLQLGKHG-AAIAIMGRRKTVLR--SAVAALHSLGIPAIGLEGDVRKREDAVRVV 80 (249)
Q Consensus 7 ~~~l~~k~~lItGa~---~giG~~~a~~l~~~G-~~v~l~~r~~~~~~--~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~ 80 (249)
...++.|++.|+|+| +..|..+.+.|.+.| .+|+.+..+.++.. .....+.+....+..+.+ ....+.+.+++
T Consensus 3 ~~lf~PksIAVVGaS~~~~~~g~~v~~~L~~~~~g~v~pVnP~~~~i~G~~~y~sl~dlp~~vDlvvi-~vp~~~~~~~~ 81 (129)
T d2csua1 3 DYFFNPKGIAVIGASNDPKKLGYEVFKNLKEYKKGKVYPVNIKEEEVQGVKAYKSVKDIPDEIDLAII-VVPKRFVKDTL 81 (129)
T ss_dssp CTTTSCSEEEEETCCSCTTSHHHHHHHHHTTCCSSEEEEECSSCSEETTEECBSSTTSCSSCCSEEEE-CSCHHHHHHHH
T ss_pred hHhCCCCeEEEEccCCCCCCcHHHHHHHHHHcCCCcEEEeccCccccCCeEeecchhhcCCCCceEEE-ecChHHhHHHH
Confidence 345788999999999 789999999988766 58988876654321 122222222223333322 33567788888
Q ss_pred HHHHHHhCCccEEEEcCCCC
Q 025672 81 ESTINHFGKLDILVNAAAGN 100 (249)
Q Consensus 81 ~~~~~~~~~id~vi~~ag~~ 100 (249)
+++.+. |.-.+++..+|+.
T Consensus 82 ~~~~~~-g~~~~vi~s~Gf~ 100 (129)
T d2csua1 82 IQCGEK-GVKGVVIITAGFG 100 (129)
T ss_dssp HHHHHH-TCCEEEECCCSST
T ss_pred HHHHHc-CCCEEEEeccccc
Confidence 888766 3334566666643
|
| >d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: GDP-mannose 6-dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=91.97 E-value=0.12 Score=37.61 Aligned_cols=38 Identities=13% Similarity=0.011 Sum_probs=31.4
Q ss_pred EEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHH
Q 025672 15 ALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAV 53 (249)
Q Consensus 15 ~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~ 53 (249)
+.|. |.|-+|..+|..|+++|++|+++|.|++..+.+.
T Consensus 3 I~Vi-GlG~vGl~~a~~la~~g~~V~g~D~n~~~i~~ln 40 (202)
T d1mv8a2 3 ISIF-GLGYVGAVCAGCLSARGHEVIGVDVSSTKIDLIN 40 (202)
T ss_dssp EEEE-CCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred EEEE-CCCHhHHHHHHHHHhCCCcEEEEeCCHHHHHHhc
Confidence 5566 5679999999999999999999999877655443
|
| >d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: hypothetical RNA methyltransferase domain: Hypothetical protein SMu776, middle and C-terminal domains species: Streptococcus mutans [TaxId: 1309]
Probab=91.97 E-value=2.1 Score=33.12 Aligned_cols=80 Identities=18% Similarity=0.071 Sum_probs=53.3
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhcC---CCeeEEEccCCCHHHHHHHHHHHHHH
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLG---IPAIGLEGDVRKREDAVRVVESTINH 86 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dl~~~~~~~~~~~~~~~~ 86 (249)
+|++||=..+..| | ++.+.+..|+ +|+.++.++..++...+.+...+ .++.+++.|+- ..++...+.
T Consensus 144 ~g~~VLdlf~~~G-~--~sl~aa~~ga~~V~~vD~s~~a~~~a~~N~~~n~l~~~~~~~i~~d~~------~~l~~~~~~ 214 (317)
T d2b78a2 144 AGKTVLNLFSYTA-A--FSVAAAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVF------DYFKYARRH 214 (317)
T ss_dssp BTCEEEEETCTTT-H--HHHHHHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHH------HHHHHHHHT
T ss_pred CCCceeecCCCCc-H--HHHHHHhCCCceEEEecCCHHHHHHHHHHHHHhcccCcceEEEEccHH------HHHHHHHhh
Confidence 5778776655544 1 2234556787 69999999988887777765332 46788888874 333344444
Q ss_pred hCCccEEEEcCCC
Q 025672 87 FGKLDILVNAAAG 99 (249)
Q Consensus 87 ~~~id~vi~~ag~ 99 (249)
..+.|+||..+-.
T Consensus 215 ~~~fD~Ii~DPP~ 227 (317)
T d2b78a2 215 HLTYDIIIIDPPS 227 (317)
T ss_dssp TCCEEEEEECCCC
T ss_pred cCCCCEEEEcChh
Confidence 5689999998764
|
| >d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Glycine oxidase ThiO species: Bacillus sp. [TaxId: 1409]
Probab=91.80 E-value=0.079 Score=40.09 Aligned_cols=31 Identities=29% Similarity=0.408 Sum_probs=27.2
Q ss_pred EEEecCCCchhHHHHHHHHHcCCeEEEEeCCc
Q 025672 15 ALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK 46 (249)
Q Consensus 15 ~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~ 46 (249)
|+|+|| |-.|.++|.+|+++|.+|++++++.
T Consensus 7 vvIIGa-Gi~Gls~A~~La~~G~~V~vlE~~~ 37 (276)
T d1ryia1 7 AVVIGG-GIIGSAIAYYLAKENKNTALFESGT 37 (276)
T ss_dssp EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 677765 5899999999999999999999864
|
| >d1ws6a1 c.66.1.46 (A:15-185) Methyltransferase TTHA0928 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: YhhF-like domain: Methyltransferase TTHA0928 species: Thermus thermophilus [TaxId: 274]
Probab=91.78 E-value=0.42 Score=33.57 Aligned_cols=79 Identities=14% Similarity=0.118 Sum_probs=48.3
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCc
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 90 (249)
+|+++|=.|+.+|. ++.+++.+|++|+.++.++...+.+.+.+...+....++..| .+. +.........+.
T Consensus 41 ~g~~vLDl~~G~G~---~~i~a~~~ga~vv~vD~~~~a~~~~~~N~~~~~~~~~v~~~~---~d~---~~~~~~~~~~~f 111 (171)
T d1ws6a1 41 RRGRFLDPFAGSGA---VGLEAASEGWEAVLVEKDPEAVRLLKENVRRTGLGARVVALP---VEV---FLPEAKAQGERF 111 (171)
T ss_dssp TCCEEEEETCSSCH---HHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHTCCCEEECSC---HHH---HHHHHHHTTCCE
T ss_pred CCCeEEEeccccch---hhhhhhhccchhhhcccCHHHHhhhhHHHHhhccccceeeee---hhc---ccccccccCCcc
Confidence 46666655555442 445667789999999999988887777776544433333222 222 222222333579
Q ss_pred cEEEEcCC
Q 025672 91 DILVNAAA 98 (249)
Q Consensus 91 d~vi~~ag 98 (249)
|+|+.++-
T Consensus 112 D~If~DPP 119 (171)
T d1ws6a1 112 TVAFMAPP 119 (171)
T ss_dssp EEEEECCC
T ss_pred ceeEEccc
Confidence 99998874
|
| >d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Nitrogenase iron protein-like domain: Arsenite-translocating ATPase ArsA species: Escherichia coli [TaxId: 562]
Probab=91.77 E-value=0.091 Score=40.03 Aligned_cols=37 Identities=14% Similarity=0.273 Sum_probs=31.7
Q ss_pred CCcEEEEecCCCchhHHH-----HHHHHHcCCeEEEEeCCcc
Q 025672 11 KGKVALLTGGGSGIGFEI-----SLQLGKHGAAIAIMGRRKT 47 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~-----a~~l~~~G~~v~l~~r~~~ 47 (249)
+++.++|+.|-||+|+.. |..|+++|.+|.++|-+..
T Consensus 18 ~~~~iii~sGKGGVGKTT~a~nLA~~lA~~G~rVllvD~Dp~ 59 (279)
T d1ihua2 18 NEHGLIMLMGKGGVGKTTMAAAIAVRLADMGFDVHLTTSDPA 59 (279)
T ss_dssp TSCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESCCC
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence 467888888899999965 7899999999999998854
|
| >d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]
Probab=91.68 E-value=0.11 Score=36.28 Aligned_cols=35 Identities=14% Similarity=0.313 Sum_probs=30.0
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCC--eEEEEeCCc
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGA--AIAIMGRRK 46 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~--~v~l~~r~~ 46 (249)
.||+++|+||+ -.|..+|..|.+.|. +|+++++++
T Consensus 1 ~gkrivIvGgG-~~G~e~A~~l~~~~~~~~Vtlie~~~ 37 (186)
T d1fcda1 1 AGRKVVVVGGG-TGGATAAKYIKLADPSIEVTLIEPNT 37 (186)
T ss_dssp CCCEEEEECCS-HHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred CCCcEEEECcc-HHHHHHHHHHHHcCCCCcEEEEECCC
Confidence 48999999986 779999999999885 788888765
|
| >d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Dihydroxypyridine hydroxylase DhpH species: Arthrobacter nicotinovorans [TaxId: 29320]
Probab=91.31 E-value=0.13 Score=38.36 Aligned_cols=35 Identities=20% Similarity=0.327 Sum_probs=29.5
Q ss_pred CcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcc
Q 025672 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT 47 (249)
Q Consensus 12 ~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~ 47 (249)
.++|+|+||. --|..+|..|+++|.+|+++.|+.+
T Consensus 4 ~~kV~IiGaG-~aGl~~A~~L~~~G~~v~v~Er~~~ 38 (265)
T d2voua1 4 TDRIAVVGGS-ISGLTAALMLRDAGVDVDVYERSPQ 38 (265)
T ss_dssp CSEEEEECCS-HHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCcEEEECcC-HHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 4668888875 7789999999999999999998654
|
| >d1iuka_ c.2.1.8 (A:) Hypothetical protein TT1466 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Hypothetical protein TT1466 species: Thermus thermophilus [TaxId: 274]
Probab=91.26 E-value=0.76 Score=30.90 Aligned_cols=87 Identities=17% Similarity=0.123 Sum_probs=54.9
Q ss_pred CCCcEEEEecCC---CchhHHHHHHHHHcCCeEEEEeCCcc--hH--HHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHH
Q 025672 10 LKGKVALLTGGG---SGIGFEISLQLGKHGAAIAIMGRRKT--VL--RSAVAALHSLGIPAIGLEGDVRKREDAVRVVES 82 (249)
Q Consensus 10 l~~k~~lItGa~---~giG~~~a~~l~~~G~~v~l~~r~~~--~~--~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~ 82 (249)
++.|++.|+|+| +..|..+.+.|.+.|++++++.-+.. .. ......+.+....+..+.+ +...+.+..++++
T Consensus 11 ~~pksIAVVGaS~~~~k~g~~v~~~L~~~g~~~~~v~~~~~~~~i~g~~~~~~l~~i~~~iD~v~v-~~p~~~v~~~v~~ 89 (136)
T d1iuka_ 11 SQAKTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPVNPRFQGEELFGEEAVASLLDLKEPVDILDV-FRPPSALMDHLPE 89 (136)
T ss_dssp HHCCEEEEETCCSSTTSHHHHHHHHHHHTTCEEEEECGGGTTSEETTEECBSSGGGCCSCCSEEEE-CSCHHHHTTTHHH
T ss_pred hCCCeEEEEeecCCCCCchHHHHHHHhcCCCCceEEEeccccceeeceecccchhhccCCCceEEE-eccHHHHHHHHHH
Confidence 367999999999 57999999999999999988765432 11 1111112222223333322 3356777777777
Q ss_pred HHHHhCCccEEEEcCCC
Q 025672 83 TINHFGKLDILVNAAAG 99 (249)
Q Consensus 83 ~~~~~~~id~vi~~ag~ 99 (249)
+.+. .+..++...|.
T Consensus 90 ~~~~--g~k~i~~q~G~ 104 (136)
T d1iuka_ 90 VLAL--RPGLVWLQSGI 104 (136)
T ss_dssp HHHH--CCSCEEECTTC
T ss_pred HHhh--CCCeEEEecCc
Confidence 7655 35667777774
|
| >d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Trimethylamine dehydrogenase, middle domain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=91.23 E-value=0.2 Score=37.06 Aligned_cols=37 Identities=19% Similarity=0.271 Sum_probs=31.9
Q ss_pred CCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcc
Q 025672 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT 47 (249)
Q Consensus 10 l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~ 47 (249)
-++|.++|+||. --|...|..|+++|++|+++.++..
T Consensus 47 ~~~k~VvIIGaG-pAGl~aA~~l~~~G~~v~l~E~~~~ 83 (233)
T d1djqa3 47 KNKDSVLIVGAG-PSGSEAARVLMESGYTVHLTDTAEK 83 (233)
T ss_dssp SSCCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred cCCceEEEEccc-HHHHHHHHHHHHhccceeeEeeccc
Confidence 468999999976 6799999999999999999987543
|
| >d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: L-aminoacid oxidase species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]
Probab=91.11 E-value=0.11 Score=39.94 Aligned_cols=36 Identities=17% Similarity=0.365 Sum_probs=30.8
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcc
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT 47 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~ 47 (249)
+.|.|+|+||. --|...|..|+++|++|+++.++..
T Consensus 29 ~pkkV~IIGaG-~aGLsaA~~L~~~G~~V~vlE~~~~ 64 (370)
T d2iida1 29 NPKHVVIVGAG-MAGLSAAYVLAGAGHQVTVLEASER 64 (370)
T ss_dssp SCCEEEEECCB-HHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred CCCeEEEECCC-HHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 46789999876 6699999999999999999997653
|
| >d1hyqa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Nitrogenase iron protein-like domain: Cell division regulator MinD species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=90.95 E-value=0.12 Score=38.11 Aligned_cols=34 Identities=18% Similarity=0.396 Sum_probs=29.4
Q ss_pred cEEEEecCCCchhH-----HHHHHHHHcCCeEEEEeCCc
Q 025672 13 KVALLTGGGSGIGF-----EISLQLGKHGAAIAIMGRRK 46 (249)
Q Consensus 13 k~~lItGa~~giG~-----~~a~~l~~~G~~v~l~~r~~ 46 (249)
|++.|+++-||+|+ .+|..|+++|.+|.++|-+.
T Consensus 2 kvIav~s~KGGvGKTtia~nlA~~la~~g~~VlliD~D~ 40 (232)
T d1hyqa_ 2 RTITVASGKGGTGKTTITANLGVALAQLGHDVTIVDADI 40 (232)
T ss_dssp EEEEEEESSSCSCHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred EEEEEECCCCCChHHHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 78999999999998 45778889999999998764
|
| >d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: UbiE/COQ5-like domain: Hypothetical protein BH2331 species: Bacillus halodurans [TaxId: 86665]
Probab=90.41 E-value=0.61 Score=33.91 Aligned_cols=76 Identities=14% Similarity=0.161 Sum_probs=55.6
Q ss_pred CcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcC-CCeeEEEccCCCHHHHHHHHHHHHHHhCCc
Q 025672 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG-IPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (249)
Q Consensus 12 ~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 90 (249)
+.+||=.|++.|. .+..|+++|++|+.++.+++-++...+.+...+ .++.++..|..+..- .-+..
T Consensus 16 ~~rVLDiGcG~G~---~~~~l~~~~~~v~gvD~s~~~i~~A~~~~~~~~~~~i~~~~~d~~~l~~----------~~~~f 82 (231)
T d1vl5a_ 16 NEEVLDVATGGGH---VANAFAPFVKKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMPF----------TDERF 82 (231)
T ss_dssp CCEEEEETCTTCH---HHHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCCS----------CTTCE
T ss_pred cCEEEEecccCcH---HHHHHHHhCCEEEEEECCHHHHhhhhhcccccccccccccccccccccc----------ccccc
Confidence 5788999988774 346788899999999999887777766665443 578899999887420 11478
Q ss_pred cEEEEcCCCC
Q 025672 91 DILVNAAAGN 100 (249)
Q Consensus 91 d~vi~~ag~~ 100 (249)
|+|+.+....
T Consensus 83 D~v~~~~~l~ 92 (231)
T d1vl5a_ 83 HIVTCRIAAH 92 (231)
T ss_dssp EEEEEESCGG
T ss_pred cccccccccc
Confidence 9998876643
|
| >d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Sulfolobus tokodaii [TaxId: 111955]
Probab=90.40 E-value=0.6 Score=34.39 Aligned_cols=75 Identities=17% Similarity=0.055 Sum_probs=52.7
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCc
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 90 (249)
.+.+||-+|+.+|--.+ .|++.+.+|+.++++++..+...+.+. ...++.++..|..+- ....++.
T Consensus 70 ~g~~VLdIG~GsGy~ta---~La~l~~~V~aiE~~~~~~~~A~~~~~-~~~nv~~~~~d~~~g----------~~~~~pf 135 (224)
T d1vbfa_ 70 KGQKVLEIGTGIGYYTA---LIAEIVDKVVSVEINEKMYNYASKLLS-YYNNIKLILGDGTLG----------YEEEKPY 135 (224)
T ss_dssp TTCEEEEECCTTSHHHH---HHHHHSSEEEEEESCHHHHHHHHHHHT-TCSSEEEEESCGGGC----------CGGGCCE
T ss_pred ccceEEEecCCCCHHHH---HHHHHhcccccccccHHHHHHHHHHHh-cccccccccCchhhc----------chhhhhH
Confidence 47789999998885443 455666789999988877666655444 346788888887541 1123679
Q ss_pred cEEEEcCCC
Q 025672 91 DILVNAAAG 99 (249)
Q Consensus 91 d~vi~~ag~ 99 (249)
|.|+.+++.
T Consensus 136 D~Iiv~~a~ 144 (224)
T d1vbfa_ 136 DRVVVWATA 144 (224)
T ss_dssp EEEEESSBB
T ss_pred HHHHhhcch
Confidence 999988764
|
| >d2fhpa1 c.66.1.46 (A:1-182) Putative methylase EF2452 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: YhhF-like domain: Putative methylase EF2452 species: Enterococcus faecalis [TaxId: 1351]
Probab=90.40 E-value=1.5 Score=30.95 Aligned_cols=80 Identities=13% Similarity=0.114 Sum_probs=53.3
Q ss_pred CCCCcEEEEecCC-CchhHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhcC--CCeeEEEccCCCHHHHHHHHHHHH
Q 025672 9 ILKGKVALLTGGG-SGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLG--IPAIGLEGDVRKREDAVRVVESTI 84 (249)
Q Consensus 9 ~l~~k~~lItGa~-~giG~~~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~ 84 (249)
.++|+++|=..+. |.+|. +.+++|+ +|+.++.+....+.+.+.+...+ .++.++..|+.+ ++++..
T Consensus 39 ~~~~~~vLDlfaGsG~~g~----ea~srGa~~v~~ve~~~~a~~~~~~N~~~~~~~~~~~i~~~D~~~------~l~~~~ 108 (182)
T d2fhpa1 39 YFDGGMALDLYSGSGGLAI----EAVSRGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANR------ALEQFY 108 (182)
T ss_dssp CCSSCEEEETTCTTCHHHH----HHHHTTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHH------HHHHHH
T ss_pred hcCCCEEEEcccccccccc----eeeecchhHHHHHHHHHHHHHHHHHHhhhhhcccccccccccchh------hhhhhc
Confidence 4567776655544 44555 4556888 59999999888777776665433 367888887643 344444
Q ss_pred HHhCCccEEEEcCC
Q 025672 85 NHFGKLDILVNAAA 98 (249)
Q Consensus 85 ~~~~~id~vi~~ag 98 (249)
+...+.|+|+..+-
T Consensus 109 ~~~~~fDlIflDPP 122 (182)
T d2fhpa1 109 EEKLQFDLVLLDPP 122 (182)
T ss_dssp HTTCCEEEEEECCC
T ss_pred ccCCCcceEEechh
Confidence 44457999998775
|
| >d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Human (Homo sapiens) [TaxId: 9606]
Probab=90.30 E-value=0.53 Score=34.65 Aligned_cols=79 Identities=20% Similarity=0.123 Sum_probs=59.1
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcC------CCeeEEEccCCCHHHHHHHHHHHH
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG------IPAIGLEGDVRKREDAVRVVESTI 84 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~------~~~~~~~~Dl~~~~~~~~~~~~~~ 84 (249)
.|.+||-+|+.+|--.++..+++....+|+.++++++-++...+.+...+ ..+.++..|..+..
T Consensus 76 ~g~~VLdiG~GsGy~ta~la~l~~~~g~V~~ie~~~~l~~~a~~~l~~~~~~~~~~~~~~~~~gD~~~~~---------- 145 (224)
T d1i1na_ 76 EGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGY---------- 145 (224)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCC----------
T ss_pred CCCeEEEecCCCCHHHHHHHHHhCCCceEEEEcCCHHHHHHHHHhccccCcccccccceEEEEeeccccc----------
Confidence 47799999999998888888888778899999999888877777665432 35677777764211
Q ss_pred HHhCCccEEEEcCCC
Q 025672 85 NHFGKLDILVNAAAG 99 (249)
Q Consensus 85 ~~~~~id~vi~~ag~ 99 (249)
...++.|.|+.+++.
T Consensus 146 ~~~~~fD~I~~~~~~ 160 (224)
T d1i1na_ 146 AEEAPYDAIHVGAAA 160 (224)
T ss_dssp GGGCCEEEEEECSBB
T ss_pred chhhhhhhhhhhcch
Confidence 123579999988774
|
| >d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Arginine methyltransferase domain: Protein arginine N-methyltransferase 1, PRMT1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=90.26 E-value=0.68 Score=35.88 Aligned_cols=76 Identities=26% Similarity=0.357 Sum_probs=53.0
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHh--cCCCeeEEEccCCCHHHHHHHHHHHHH
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHS--LGIPAIGLEGDVRKREDAVRVVESTIN 85 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 85 (249)
..+||+||-.|++.|+ ++..+++.|+ +|+.++.++ ......+.+.. ...++.++..|+.+.+.
T Consensus 31 ~~~~~~VLDiGcG~G~---ls~~aa~~Ga~~V~avd~s~-~~~~a~~~~~~n~~~~~v~~~~~~~~~~~~---------- 96 (316)
T d1oria_ 31 LFKDKVVLDVGSGTGI---LCMFAAKAGARKVIGIECSS-ISDYAVKIVKANKLDHVVTIIKGKVEEVEL---------- 96 (316)
T ss_dssp HHTTCEEEEETCTTSH---HHHHHHHTTCSEEEEEECST-THHHHHHHHHHTTCTTTEEEEESCTTTCCC----------
T ss_pred cCCcCEEEEEecCCcH---HHHHHHHhCCCEEEEEcCcH-HHhhhhhHHHHhCCccccceEeccHHHccc----------
Confidence 3579999999998885 5677888897 698999765 34444444433 24579999999887531
Q ss_pred HhCCccEEEEcCC
Q 025672 86 HFGKLDILVNAAA 98 (249)
Q Consensus 86 ~~~~id~vi~~ag 98 (249)
...++|+|+....
T Consensus 97 ~~~~~D~ivs~~~ 109 (316)
T d1oria_ 97 PVEKVDIIISEWM 109 (316)
T ss_dssp SSSCEEEEEECCC
T ss_pred ccceeEEEeeeee
Confidence 1247899987543
|
| >d2igta1 c.66.1.51 (A:1-309) Putative methyltransferase Atu0340 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: hypothetical RNA methyltransferase domain: Putative methyltransferase Atu0340 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=89.91 E-value=1.5 Score=33.89 Aligned_cols=81 Identities=17% Similarity=0.110 Sum_probs=53.4
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHh--cC-CCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHS--LG-IPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~--~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
++++||=..+..| .++..++..|++|+.++.+...++...+.+.. .. .++.++..|+. ..+++..+..
T Consensus 132 ~~~rVLdlf~~tG---~~sl~aa~~GA~V~~VD~s~~al~~a~~N~~ln~~~~~~~~~i~~D~~------~~l~~~~~~~ 202 (309)
T d2igta1 132 RPLKVLNLFGYTG---VASLVAAAAGAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAM------KFIQREERRG 202 (309)
T ss_dssp SCCEEEEETCTTC---HHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHH------HHHHHHHHHT
T ss_pred CCCeEEEecCCCc---HHHHHHHhCCCeEEEEeChHHHHHHHHHhhhhhcccCCcEEEEeCCHH------HhHHHHhhcC
Confidence 4666665555544 23334567899999999998888777765542 22 35788877764 3344444455
Q ss_pred CCccEEEEcCCCC
Q 025672 88 GKLDILVNAAAGN 100 (249)
Q Consensus 88 ~~id~vi~~ag~~ 100 (249)
.+.|+||.++-..
T Consensus 203 ~~fD~IilDPP~f 215 (309)
T d2igta1 203 STYDIILTDPPKF 215 (309)
T ss_dssp CCBSEEEECCCSE
T ss_pred CCCCEEEECCCcc
Confidence 6899999987643
|
| >d1gtma1 c.2.1.7 (A:181-419) Glutamate dehydrogenase {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=89.90 E-value=0.51 Score=35.17 Aligned_cols=35 Identities=23% Similarity=0.454 Sum_probs=28.6
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHH-cCCeEEEEe
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGK-HGAAIAIMG 43 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~-~G~~v~l~~ 43 (249)
..++||+++|-|- |.+|..+++.|++ .|++|+.+.
T Consensus 28 ~~l~g~~v~IqGf-GnVG~~~a~~L~~~~G~kvv~vs 63 (239)
T d1gtma1 28 DTLKGKTIAIQGY-GNAGYYLAKIMSEDFGMKVVAVS 63 (239)
T ss_dssp SCSTTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEEE
T ss_pred CCcCCCEEEEECC-CHHHHHHHHHHHHhcCcceeecc
Confidence 3589999999886 6799999999986 588877654
|
| >d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavin-dependent monoxygenase SPBP16F5.08c species: Schizosaccharomyces pombe [TaxId: 4896]
Probab=89.68 E-value=0.11 Score=33.65 Aligned_cols=40 Identities=13% Similarity=0.155 Sum_probs=32.9
Q ss_pred CCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcc
Q 025672 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT 47 (249)
Q Consensus 7 ~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~ 47 (249)
..+++||+|+|.|++ --|..+|..|+..+.++++..|+..
T Consensus 27 ~~~f~gK~VlVVG~g-~Sa~dia~~l~~~ak~v~~~~~r~~ 66 (107)
T d2gv8a2 27 PELFVGESVLVVGGA-SSANDLVRHLTPVAKHPIYQSLLGG 66 (107)
T ss_dssp GGGGTTCCEEEECSS-HHHHHHHHHHTTTSCSSEEEECTTC
T ss_pred hhhcCCCeEEEECCC-CCHHHHHHHHHHhcCEEEEEEecCc
Confidence 345899999999987 6788899999998888877777644
|
| >d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: UDP-galactopyranose mutase, N-terminal domain domain: UDP-galactopyranose mutase, N-terminal domain species: Klebsiella pneumoniae [TaxId: 573]
Probab=89.56 E-value=0.2 Score=38.99 Aligned_cols=36 Identities=33% Similarity=0.485 Sum_probs=30.1
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcc
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT 47 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~ 47 (249)
+.|.++|+||. --|..+|..|+++|++|.++.++..
T Consensus 1 k~KKI~IIGaG-~sGL~aA~~L~k~G~~V~viEk~~~ 36 (314)
T d2bi7a1 1 KSKKILIVGAG-FSGAVIGRQLAEKGHQVHIIDQRDH 36 (314)
T ss_dssp CCCEEEEECCS-HHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred CCCEEEEECCc-HHHHHHHHHHHhCCCCEEEEECCCC
Confidence 35788999875 6788999999999999999987654
|
| >d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Sarcosine oxidase species: Bacillus sp., strain b0618 [TaxId: 1409]
Probab=89.29 E-value=0.18 Score=38.16 Aligned_cols=30 Identities=20% Similarity=0.442 Sum_probs=26.1
Q ss_pred EEEecCCCchhHHHHHHHHHcCCeEEEEeCC
Q 025672 15 ALLTGGGSGIGFEISLQLGKHGAAIAIMGRR 45 (249)
Q Consensus 15 ~lItGa~~giG~~~a~~l~~~G~~v~l~~r~ 45 (249)
|+|+|| |-.|..+|.+|+++|.+|++++++
T Consensus 6 vvIIGa-Gi~Gls~A~~La~~G~~V~viE~~ 35 (281)
T d2gf3a1 6 VIVVGA-GSMGMAAGYQLAKQGVKTLLVDAF 35 (281)
T ss_dssp EEEECC-SHHHHHHHHHHHHTTCCEEEECSS
T ss_pred EEEECc-CHHHHHHHHHHHHCCCcEEEEeCC
Confidence 677765 478999999999999999999875
|
| >d1cp2a_ c.37.1.10 (A:) Nitrogenase iron protein {Clostridium pasteurianum [TaxId: 1501]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Nitrogenase iron protein-like domain: Nitrogenase iron protein species: Clostridium pasteurianum [TaxId: 1501]
Probab=89.03 E-value=0.15 Score=38.67 Aligned_cols=34 Identities=24% Similarity=0.408 Sum_probs=28.1
Q ss_pred cEEEEecCCCchhHH-----HHHHHHHcCCeEEEEeCCcc
Q 025672 13 KVALLTGGGSGIGFE-----ISLQLGKHGAAIAIMGRRKT 47 (249)
Q Consensus 13 k~~lItGa~~giG~~-----~a~~l~~~G~~v~l~~r~~~ 47 (249)
|++.|+| -||+|+. +|..|+++|.+|.++|-+..
T Consensus 2 r~Iai~g-KGGvGKTT~a~nLA~~LA~~G~rVllID~D~q 40 (269)
T d1cp2a_ 2 RQVAIYG-KGGIGKSTTTQNLTSGLHAMGKTIMVVGCDPK 40 (269)
T ss_dssp EEEEEEE-CTTSSHHHHHHHHHHHHHTTTCCEEEEEECTT
T ss_pred CEEEEEC-CCcCCHHHHHHHHHHHHHhCCCcEEEEecCCC
Confidence 6788897 8999984 56689999999999998753
|
| >d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains species: Escherichia coli [TaxId: 562]
Probab=88.85 E-value=1.4 Score=29.17 Aligned_cols=76 Identities=14% Similarity=0.191 Sum_probs=52.3
Q ss_pred CcEEEEecCCC-c---------hhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHH
Q 025672 12 GKVALLTGGGS-G---------IGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVE 81 (249)
Q Consensus 12 ~k~~lItGa~~-g---------iG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~ 81 (249)
.|.+||.|+.. - -+.+.++.|.+.|++++++..|++....-. ...+++.| .--..+++.++++
T Consensus 7 ~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~~~iliN~NP~TVstd~----d~aD~lYf---ePlt~e~v~~Ii~ 79 (127)
T d1a9xa3 7 IKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPATIMTDP----EMADATYI---EPIHWEVVRKIIE 79 (127)
T ss_dssp CCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECSCTTCGGGCG----GGSSEEEC---SCCCHHHHHHHHH
T ss_pred CCEEEEECCCcCcccccchhHHHHHHHHHHHHHcCCeEEEecCchHhhhcCh----hhcceeee---ecCCHHHHHHHHH
Confidence 47889998863 2 356788999999999999999887533211 11234444 4445677777776
Q ss_pred HHHHHhCCccEEEEcCCC
Q 025672 82 STINHFGKLDILVNAAAG 99 (249)
Q Consensus 82 ~~~~~~~~id~vi~~ag~ 99 (249)
.- ++|.++-..|.
T Consensus 80 ~E-----~pd~il~~~GG 92 (127)
T d1a9xa3 80 KE-----RPDAVLPTMGG 92 (127)
T ss_dssp HH-----CCSEEECSSSH
T ss_pred Hh-----CcCCeEEEeee
Confidence 53 79999988774
|
| >d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Trypanothione reductase species: Crithidia fasciculata [TaxId: 5656]
Probab=88.50 E-value=0.71 Score=29.91 Aligned_cols=35 Identities=29% Similarity=0.374 Sum_probs=27.5
Q ss_pred CcEEEEecCCCchhHHHHHHHHH---cCCeEEEEeCCcc
Q 025672 12 GKVALLTGGGSGIGFEISLQLGK---HGAAIAIMGRRKT 47 (249)
Q Consensus 12 ~k~~lItGa~~giG~~~a~~l~~---~G~~v~l~~r~~~ 47 (249)
.|.++|.||+ .+|.++|..|.+ .|.+|.++.|.+.
T Consensus 18 p~~v~IiGgG-~ig~E~A~~l~~~~~~g~~Vtli~~~~~ 55 (117)
T d1feca2 18 PKRALCVGGG-YISIEFAGIFNAYKARGGQVDLAYRGDM 55 (117)
T ss_dssp CSEEEEECSS-HHHHHHHHHHHHHSCTTCEEEEEESSSS
T ss_pred CCeEEEECCC-hHHHHHHHHhHhhcccccccceeccccc
Confidence 4788898875 899999976655 4889999988643
|
| >d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: N,N-dimethylglycine oxidase species: Arthrobacter globiformis [TaxId: 1665]
Probab=88.47 E-value=0.22 Score=38.17 Aligned_cols=31 Identities=19% Similarity=0.399 Sum_probs=26.5
Q ss_pred EEEecCCCchhHHHHHHHHHcCC-eEEEEeCCc
Q 025672 15 ALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRK 46 (249)
Q Consensus 15 ~lItGa~~giG~~~a~~l~~~G~-~v~l~~r~~ 46 (249)
|+|+||. -+|.++|.+|+++|. +|++++++.
T Consensus 4 ViIIGaG-i~G~s~A~~La~~G~~~V~liE~~~ 35 (305)
T d1pj5a2 4 IVIIGAG-IVGTNLADELVTRGWNNITVLDQGP 35 (305)
T ss_dssp EEEECCS-HHHHHHHHHHHHTTCCCEEEECSSC
T ss_pred EEEECcC-HHHHHHHHHHHHcCCCcEEEEeCCC
Confidence 6788765 899999999999997 599998863
|
| >d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Arginine methyltransferase domain: Arginine methyltransferase, HMT1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=88.40 E-value=1.2 Score=34.61 Aligned_cols=75 Identities=25% Similarity=0.337 Sum_probs=52.0
Q ss_pred CCCcEEEEecCCCchhHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhc--CCCeeEEEccCCCHHHHHHHHHHHHHH
Q 025672 10 LKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVESTINH 86 (249)
Q Consensus 10 l~~k~~lItGa~~giG~~~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 86 (249)
++|++||-.|++.|+ ++..+++.|+ +|+.++.++ ..+...+..... ..++.++..|+.+.+- .
T Consensus 37 ~~~~~VLDlGcGtG~---ls~~aa~~Ga~~V~avd~s~-~~~~a~~~~~~~~~~~~i~~i~~~~~~l~~----------~ 102 (328)
T d1g6q1_ 37 FKDKIVLDVGCGTGI---LSMFAAKHGAKHVIGVDMSS-IIEMAKELVELNGFSDKITLLRGKLEDVHL----------P 102 (328)
T ss_dssp HTTCEEEEETCTTSH---HHHHHHHTCCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSCC----------S
T ss_pred CCcCEEEEeCCCCCH---HHHHHHHhCCCEEEEEeCCH-HHHHHHHHHHHhCccccceEEEeehhhccC----------c
Confidence 579999999998874 5667788897 688888764 444444444333 4578999999886531 1
Q ss_pred hCCccEEEEcCC
Q 025672 87 FGKLDILVNAAA 98 (249)
Q Consensus 87 ~~~id~vi~~ag 98 (249)
-.+.|+|+...-
T Consensus 103 ~~~~D~i~se~~ 114 (328)
T d1g6q1_ 103 FPKVDIIISEWM 114 (328)
T ss_dssp SSCEEEEEECCC
T ss_pred ccceeEEEEEec
Confidence 146899987544
|
| >d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains species: Escherichia coli [TaxId: 562]
Probab=88.36 E-value=1.7 Score=28.40 Aligned_cols=76 Identities=16% Similarity=0.158 Sum_probs=50.2
Q ss_pred CcEEEEecCCC----------chhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHH
Q 025672 12 GKVALLTGGGS----------GIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVE 81 (249)
Q Consensus 12 ~k~~lItGa~~----------giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~ 81 (249)
.|.+||.|+.. =-+.+.++.|.+.|++++++..|++....-. ...+++.| .--..+.+..+++
T Consensus 4 ~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~g~~~IliN~NPeTVstd~----d~aD~lYf---eplt~e~v~~Ii~ 76 (121)
T d1a9xa4 4 REKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDY----DTSDRLYF---EPVTLEDVLEIVR 76 (121)
T ss_dssp SCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTCEEEEECCCTTSSTTST----TSSSEEEC---CCCSHHHHHHHHH
T ss_pred CCEEEEECCCcCcccccchhhHHHHHHHHHHHhcCCeEEEEecChhhhhcCh----hhcCceEE---ccCCHHHHHHHHH
Confidence 57889999863 2355788999999999999998887432110 11233433 3334566666665
Q ss_pred HHHHHhCCccEEEEcCCC
Q 025672 82 STINHFGKLDILVNAAAG 99 (249)
Q Consensus 82 ~~~~~~~~id~vi~~ag~ 99 (249)
.- ++|.++-..|.
T Consensus 77 ~E-----~p~~ii~~~GG 89 (121)
T d1a9xa4 77 IE-----KPKGVIVQYGG 89 (121)
T ss_dssp HH-----CCSEEECSSST
T ss_pred Hh-----CCCEEEeehhh
Confidence 42 68999887774
|
| >d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: GDI-like N domain domain: Guanine nucleotide dissociation inhibitor, GDI species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=88.09 E-value=0.25 Score=35.94 Aligned_cols=31 Identities=13% Similarity=0.161 Sum_probs=26.7
Q ss_pred EEEecCCCchhHHHHHHHHHcCCeEEEEeCCc
Q 025672 15 ALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK 46 (249)
Q Consensus 15 ~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~ 46 (249)
|+|+|| |--|..+|..|+++|.+|.++.++.
T Consensus 8 viViGa-G~~Gl~~A~~La~~G~~V~vlE~~~ 38 (297)
T d2bcgg1 8 VIVLGT-GITECILSGLLSVDGKKVLHIDKQD 38 (297)
T ss_dssp EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred EEEECc-CHHHHHHHHHHHHCCCCEEEEcCCC
Confidence 677874 5778999999999999999999875
|
| >d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Escherichia coli [TaxId: 562]
Probab=88.09 E-value=0.27 Score=34.41 Aligned_cols=85 Identities=13% Similarity=0.141 Sum_probs=53.6
Q ss_pred CcEEEEecCCCchhHHHHHHHHHc-CCeEE-EEeCCcch-HHHHHHHH--------------HhcCCCeeEEEccCCCHH
Q 025672 12 GKVALLTGGGSGIGFEISLQLGKH-GAAIA-IMGRRKTV-LRSAVAAL--------------HSLGIPAIGLEGDVRKRE 74 (249)
Q Consensus 12 ~k~~lItGa~~giG~~~a~~l~~~-G~~v~-l~~r~~~~-~~~~~~~~--------------~~~~~~~~~~~~Dl~~~~ 74 (249)
.-.+.|.|++|.+|+++++.+.+. +++++ .++|.... ......++ ...-.... +-.|++.++
T Consensus 4 ~ikI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~D-ViIDFs~p~ 82 (162)
T d1diha1 4 NIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVKDDFD-VFIDFTRPE 82 (162)
T ss_dssp BEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCSTTTTTSCS-EEEECSCHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecccchhccchhhhhhccccCCceeeccHHHHhcccc-eEEEeccHH
Confidence 346899999999999999999876 55654 34443211 00000000 00001111 447999999
Q ss_pred HHHHHHHHHHHHhCCccEEEEcCCC
Q 025672 75 DAVRVVESTINHFGKLDILVNAAAG 99 (249)
Q Consensus 75 ~~~~~~~~~~~~~~~id~vi~~ag~ 99 (249)
.+...++.+.+. ++.+|+-..|+
T Consensus 83 ~~~~~~~~a~~~--~~~~ViGTTG~ 105 (162)
T d1diha1 83 GTLNHLAFCRQH--GKGMVIGTTGF 105 (162)
T ss_dssp HHHHHHHHHHHT--TCEEEECCCCC
T ss_pred HHHHHHHHHHhc--cceeEEecCCC
Confidence 999999877655 57788888884
|
| >d1qkia1 c.2.1.3 (A:12-199,A:435-449) Glucose 6-phosphate dehydrogenase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glucose 6-phosphate dehydrogenase, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=87.83 E-value=1.3 Score=31.91 Aligned_cols=75 Identities=9% Similarity=0.053 Sum_probs=51.2
Q ss_pred CCcEEEEecCCCchhHHHH----HHHHHcC-----CeEEEEeCCcchHHHHHHHHHh--------------cCCCeeEEE
Q 025672 11 KGKVALLTGGGSGIGFEIS----LQLGKHG-----AAIAIMGRRKTVLRSAVAALHS--------------LGIPAIGLE 67 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a----~~l~~~G-----~~v~l~~r~~~~~~~~~~~~~~--------------~~~~~~~~~ 67 (249)
..-+++|.||+|.+.+--. -+|...| .+|+.++|++-..++..+.+.. .-.++.++.
T Consensus 19 ~~~t~VIFGatGDLA~RKL~PALf~L~~~g~Lp~~~~Iig~aR~~~s~e~fr~~~~~~~~~~~~~~~~~~~f~~~~~Y~~ 98 (203)
T d1qkia1 19 DTHIFIIMGASGDLAKKKIYPTIWWLFRDGLLPENTFIVGYARSRLTVADIRKQSEPFFKATPEEKLKLEDFFARNSYVA 98 (203)
T ss_dssp CCEEEEEETTTSHHHHHTHHHHHHHHHHTTCSCSSEEEEEEBSSCCSCHHHHHHHSCCTTCCGGGHHHHHHHHTTEECCB
T ss_pred CCcEEEEECcccHHHHhHHHHHHHHHHHcCCCCCCcEEEEEECCCCCHHHHHHHHHHHHhhchhhHHHHHHHHHhhcccc
Confidence 4567999999998876322 1334444 4789999976554554444422 124678889
Q ss_pred ccCCCHHHHHHHHHHHHH
Q 025672 68 GDVRKREDAVRVVESTIN 85 (249)
Q Consensus 68 ~Dl~~~~~~~~~~~~~~~ 85 (249)
+|.+|+++.+++-+.+.+
T Consensus 99 ~d~~~~~~~~~L~~~l~~ 116 (203)
T d1qkia1 99 GQYDDAASYQRLNSHMNA 116 (203)
T ss_dssp CCTTCHHHHHHHHHHHHH
T ss_pred CcCCChhhHHHHHHHHHH
Confidence 999999998888776654
|
| >d1m1na_ c.92.2.3 (A:) Nitrogenase iron-molybdenum protein, alpha chain {Azotobacter vinelandii [TaxId: 354]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Chelatase-like superfamily: "Helical backbone" metal receptor family: Nitrogenase iron-molybdenum protein domain: Nitrogenase iron-molybdenum protein, alpha chain species: Azotobacter vinelandii [TaxId: 354]
Probab=87.68 E-value=0.85 Score=37.62 Aligned_cols=80 Identities=16% Similarity=0.074 Sum_probs=51.9
Q ss_pred CCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhC
Q 025672 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (249)
Q Consensus 9 ~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 88 (249)
.++||++.|.|+. ....++++.|.+.|..|+.++-.....+.....+...+....+ .|-.|..+++..+.+.
T Consensus 342 ~l~Gkrv~i~~~~-~~~~~l~~~l~elGmevv~~~~~~~~~~d~~~~~~~~~~~~~i--~~d~~~~el~~~i~~~----- 413 (477)
T d1m1na_ 342 RLEGKRVMLYIGG-LRPRHVIGAYEDLGMEVVGTGYEFAHNDDYDRTMKEMGDSTLL--YDDVTGYEFEEFVKRI----- 413 (477)
T ss_dssp HHTTCEEEECBSS-SHHHHTHHHHHTTTCEEEEEEESSCCHHHHHTTTTTSCTTCEE--EESCBHHHHHHHHHHH-----
T ss_pred hhcCCcEEEecCc-hhHHHHHHHHHHCCCEEEEEeecCCChHHHHHHHHhcCCCcEE--ecCCCHHHHHHHHHhc-----
Confidence 3679999988764 6788899999999999887765433222222222222333222 3556677888887765
Q ss_pred CccEEEEc
Q 025672 89 KLDILVNA 96 (249)
Q Consensus 89 ~id~vi~~ 96 (249)
++|+++-+
T Consensus 414 ~pDL~ig~ 421 (477)
T d1m1na_ 414 KPDLIGSG 421 (477)
T ss_dssp CCSEEEEC
T ss_pred CCCEEEEC
Confidence 68999854
|
| >d1vb3a1 c.79.1.1 (A:1-428) Threonine synthase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes family: Tryptophan synthase beta subunit-like PLP-dependent enzymes domain: Threonine synthase species: Escherichia coli [TaxId: 562]
Probab=87.42 E-value=1 Score=36.61 Aligned_cols=71 Identities=15% Similarity=0.164 Sum_probs=50.8
Q ss_pred CcEEEEecCCCchhHHHHHHHHHcC-CeEEEEeCC--cchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHH
Q 025672 12 GKVALLTGGGSGIGFEISLQLGKHG-AAIAIMGRR--KTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN 85 (249)
Q Consensus 12 ~k~~lItGa~~giG~~~a~~l~~~G-~~v~l~~r~--~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 85 (249)
++..+++..||..|.+.+..+...+ .+++++.-. ....++ .++...+..++.+.+| .+.++++++++++..
T Consensus 125 ~~~~Il~ATSGDTG~Aa~~a~~~~~~i~~~vl~P~g~vS~~Q~--~Qmtt~g~nv~vi~V~-G~fDDcq~lvk~~f~ 198 (428)
T d1vb3a1 125 KPVTILTATSGDTGAAVAHAFYGLPNVKVVILYPRGKISPLQE--KLFCTLGGNIETVAID-GDFDACQALVKQAFD 198 (428)
T ss_dssp CCEEEEEECSSSHHHHHHHHTTTCTTEEEEEEEETTCSCHHHH--HHHHSCCTTEEEEEEE-SCHHHHHHHHHHGGG
T ss_pred ccceeeecCCCCcchhHHHHHhCccccceEEEecCCCCcHHHH--HHHhhccCCceEEecC-CChhHHHHHHHHHhh
Confidence 4556777788999999999999876 466665432 222232 3455567888888888 778999999888753
|
| >d1vbka1 c.26.2.6 (A:176-307) Hypothetical protein PH1313, C-terminal domain {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Adenine nucleotide alpha hydrolase-like superfamily: Adenine nucleotide alpha hydrolases-like family: ThiI-like domain: Hypothetical protein PH1313, C-terminal domain species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=87.30 E-value=1.3 Score=29.50 Aligned_cols=76 Identities=16% Similarity=0.187 Sum_probs=45.0
Q ss_pred CCCcEEEEecCCCchhHHHHHHHH-HcCCeEEEEeCC-----cchHHHHHHHHHhc--CCCeeEEEccCCCHHHHHHHHH
Q 025672 10 LKGKVALLTGGGSGIGFEISLQLG-KHGAAIAIMGRR-----KTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVE 81 (249)
Q Consensus 10 l~~k~~lItGa~~giG~~~a~~l~-~~G~~v~l~~r~-----~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~ 81 (249)
.+||.+.+. |||| +.+|.++. ++|++|+.+.-+ .++..++.+.+... +.++.++..+. .+. +-
T Consensus 3 t~Gk~l~Ll--SGGi-SpVAa~lmmkRG~~V~~v~f~~~~~~~ekv~~l~~~L~~y~~~~~~~~~v~~~--~~~----~~ 73 (132)
T d1vbka1 3 TEGRMIGIL--HDEL-SALAIFLMMKRGVEVIPVYIGKDDKNLEKVRSLWNLLKRYSYGSKGFLVVAES--FDR----VL 73 (132)
T ss_dssp TTCEEEEEC--SSHH-HHHHHHHHHHBTCEEEEEEESCSSHHHHHHHHHHHHHHTTCTTSCCCCEEESS--HHH----HH
T ss_pred cCceEEEee--cCCc-hHHHHHHHHHCCCEEEEEEEcCCHHHHHHHHHHHHHHHHhCCCCCcEEEEeeH--HHH----HH
Confidence 368888887 8999 98888766 789998876432 22334455555544 34444444443 233 33
Q ss_pred HHHHHhCCccEEEE
Q 025672 82 STINHFGKLDILVN 95 (249)
Q Consensus 82 ~~~~~~~~id~vi~ 95 (249)
++.++++ .+.++.
T Consensus 74 riA~~~~-a~~ivt 86 (132)
T d1vbka1 74 KLIRDFG-VKGVIK 86 (132)
T ss_dssp HHHHHHT-CCEEEC
T ss_pred HHHHHhh-hhceEE
Confidence 4445554 466653
|
| >d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Protoporphyrinogen oxidase species: Myxococcus xanthus [TaxId: 34]
Probab=87.11 E-value=0.24 Score=37.24 Aligned_cols=32 Identities=16% Similarity=0.333 Sum_probs=27.6
Q ss_pred EEEEecCCCchhHHHHHHHHHcCCeEEEEeCCc
Q 025672 14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK 46 (249)
Q Consensus 14 ~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~ 46 (249)
.|+|+|| |--|...|.+|+++|++|+++.++.
T Consensus 2 ~V~IIGa-G~aGL~aA~~L~~~G~~V~vlE~~~ 33 (347)
T d2ivda1 2 NVAVVGG-GISGLAVAHHLRSRGTDAVLLESSA 33 (347)
T ss_dssp CEEEECC-BHHHHHHHHHHHTTTCCEEEECSSS
T ss_pred eEEEECC-CHHHHHHHHHHHhCCCCEEEEecCC
Confidence 4788887 5678999999999999999998764
|
| >d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: UbiE/COQ5-like domain: Hypothetical protein YcgJ species: Bacillus subtilis [TaxId: 1423]
Probab=86.98 E-value=1.2 Score=32.49 Aligned_cols=75 Identities=16% Similarity=0.104 Sum_probs=55.6
Q ss_pred CcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcC-CCeeEEEccCCCHHHHHHHHHHHHHHhCCc
Q 025672 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG-IPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (249)
Q Consensus 12 ~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 90 (249)
|.+||=.|++.| .++..|+++|.+|+.+|.++.-++...+.+...+ .++.++..|..+.. + . .+.+
T Consensus 17 ~~rILDiGcGtG---~~~~~la~~~~~v~gvD~S~~~l~~A~~~~~~~~~~~~~~~~~d~~~~~-~----~-----~~~f 83 (234)
T d1xxla_ 17 EHRVLDIGAGAG---HTALAFSPYVQECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLP-F----P-----DDSF 83 (234)
T ss_dssp TCEEEEESCTTS---HHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCC-S----C-----TTCE
T ss_pred CCEEEEeCCcCc---HHHHHHHHhCCeEEEEeCChhhhhhhhhhhccccccccccccccccccc-c----c-----cccc
Confidence 678899999888 4556778889999999999888777776665544 46889999987642 0 0 1578
Q ss_pred cEEEEcCCC
Q 025672 91 DILVNAAAG 99 (249)
Q Consensus 91 d~vi~~ag~ 99 (249)
|+|+.+-..
T Consensus 84 D~v~~~~~l 92 (234)
T d1xxla_ 84 DIITCRYAA 92 (234)
T ss_dssp EEEEEESCG
T ss_pred ceeeeecee
Confidence 988876553
|
| >d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Peptidoglycan biosynthesis glycosyltransferase MurG domain: Peptidoglycan biosynthesis glycosyltransferase MurG species: Escherichia coli [TaxId: 562]
Probab=86.57 E-value=0.49 Score=36.50 Aligned_cols=32 Identities=25% Similarity=0.513 Sum_probs=22.8
Q ss_pred cEEEEecCCCchhH-----HHHHHHHHcCCeEEEEeCC
Q 025672 13 KVALLTGGGSGIGF-----EISLQLGKHGAAIAIMGRR 45 (249)
Q Consensus 13 k~~lItGa~~giG~-----~~a~~l~~~G~~v~l~~r~ 45 (249)
|+++|++|+.| |. +++++|.++|++|..++..
T Consensus 1 kkili~~~GtG-GHv~~a~al~~~L~~~G~eV~~i~~~ 37 (351)
T d1f0ka_ 1 KRLMVMAGGTG-GHVFPGLAVAHHLMAQGWQVRWLGTA 37 (351)
T ss_dssp CEEEEECCSSH-HHHHHHHHHHHHHHTTTCEEEEEECT
T ss_pred CEEEEEcCCcH-HHHHHHHHHHHHHHhCCCEEEEEEeC
Confidence 45566655434 65 5889999999999877643
|
| >d2csua3 c.23.4.1 (A:291-453) Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3 {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: Succinyl-CoA synthetase domains family: Succinyl-CoA synthetase domains domain: Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3 species: Pyrococcus horikoshii [TaxId: 53953]
Probab=86.56 E-value=1.2 Score=30.71 Aligned_cols=82 Identities=15% Similarity=0.259 Sum_probs=52.6
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcC--CCeeEEEccCCCHHHHHHHHHHHHHHhC
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG--IPAIGLEGDVRKREDAVRVVESTINHFG 88 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 88 (249)
+|+++.|.+.+||.|.-++..+.+.|.++ ..-+++..+++.+.+.... .+..-+..+ .+.+.+.++++.+.+. +
T Consensus 2 ~G~rvaiit~sGG~~~l~aD~~~~~Gl~l--~~l~~~t~~~L~~~lp~~~~~~NPlD~~~~-~~~~~~~~~l~~~~~d-~ 77 (163)
T d2csua3 2 RGNKVAIMTNAGGPGVLTADELDKRGLKL--ATLEEKTIEELRSFLPPMAAVKNPVDMIAS-ARGEDYYRTAKLLLQD-P 77 (163)
T ss_dssp SSSEEEEEESCHHHHHHHHHHHHTTTCEE--CCCCHHHHHHHHHHSCTTCEESSEEECCTT-CCHHHHHHHHHHHHHS-T
T ss_pred CCCeEEEEECChHHHHHHHHHHHHcCCcc--CCCCHHHHHHHHHhCCCcccCCCcccccCC-CCHHHHHHHHHHHHcC-C
Confidence 58889999999999999999999998555 4444444455555543221 122222233 3556677777666554 5
Q ss_pred CccEEEEc
Q 025672 89 KLDILVNA 96 (249)
Q Consensus 89 ~id~vi~~ 96 (249)
.+|.++..
T Consensus 78 ~vd~v~v~ 85 (163)
T d2csua3 78 NVDMLIAI 85 (163)
T ss_dssp TCSEEEEE
T ss_pred CcCEEEEe
Confidence 68876543
|
| >d2fpoa1 c.66.1.46 (A:10-192) Methylase YhhF {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: YhhF-like domain: Methylase YhhF species: Escherichia coli [TaxId: 562]
Probab=86.23 E-value=1.7 Score=30.52 Aligned_cols=78 Identities=14% Similarity=0.063 Sum_probs=50.0
Q ss_pred CCCcEEEEecCCCchhHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhcC-CCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 10 LKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLG-IPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 10 l~~k~~lItGa~~giG~~~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
+.++++|=.++.+| +++.+.+++|+ +|+.++.+....+.+.+.+...+ .++.++..|+. ..+....
T Consensus 42 ~~~~~vLDlfaGsG---~~giealsrGa~~v~~VE~~~~a~~~~k~N~~~~~~~~~~ii~~d~~---------~~l~~~~ 109 (183)
T d2fpoa1 42 IVDAQCLDCFAGSG---ALGLEALSRYAAGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAM---------SFLAQKG 109 (183)
T ss_dssp HTTCEEEETTCTTC---HHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHH---------HHHSSCC
T ss_pred cchhhhhhhhcccc---ceeeeEEecCcceeEEEEEeechhhHHHHHHhhccccceeeeeeccc---------ccccccc
Confidence 45666665554444 34445667898 69999999988887777776443 35677776632 1122233
Q ss_pred CCccEEEEcCCC
Q 025672 88 GKLDILVNAAAG 99 (249)
Q Consensus 88 ~~id~vi~~ag~ 99 (249)
.+.|+|+..+-+
T Consensus 110 ~~fDlIf~DPPY 121 (183)
T d2fpoa1 110 TPHNIVFVDPPF 121 (183)
T ss_dssp CCEEEEEECCSS
T ss_pred cccCEEEEcCcc
Confidence 578999998753
|
| >d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Fibrillarin homologue domain: Fibrillarin homologue species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=86.05 E-value=0.69 Score=33.60 Aligned_cols=77 Identities=16% Similarity=0.121 Sum_probs=53.4
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCc
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 90 (249)
.|.+||=.|++.|.-......+...| +|+.++.+++.++.+.+..+.. ..+.++..|..+....... +..+
T Consensus 56 pg~~VLDlGcG~G~~~~~la~~v~~g-~V~gvDis~~~i~~a~~~a~~~-~ni~~i~~d~~~~~~~~~~-------~~~v 126 (209)
T d1nt2a_ 56 GDERVLYLGAASGTTVSHLADIVDEG-IIYAVEYSAKPFEKLLELVRER-NNIIPLLFDASKPWKYSGI-------VEKV 126 (209)
T ss_dssp SSCEEEEETCTTSHHHHHHHHHTTTS-EEEEECCCHHHHHHHHHHHHHC-SSEEEECSCTTCGGGTTTT-------CCCE
T ss_pred CCCEEEEeCCcCCHHHHHHHHhccCC-eEEEEeCCHHHHHHHHHHhhcc-CCceEEEeeccCccccccc-------cceE
Confidence 37899999998885443333344444 8999999999888887776654 4788998998886653222 2356
Q ss_pred cEEEEc
Q 025672 91 DILVNA 96 (249)
Q Consensus 91 d~vi~~ 96 (249)
|++++.
T Consensus 127 d~v~~~ 132 (209)
T d1nt2a_ 127 DLIYQD 132 (209)
T ss_dssp EEEEEC
T ss_pred EEEEec
Confidence 776664
|
| >d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Usg-1 protein homolog PA3116 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=86.03 E-value=0.54 Score=32.03 Aligned_cols=35 Identities=9% Similarity=0.143 Sum_probs=27.6
Q ss_pred CcEEEEecCCCchhHHHHHHHHHcCC---eEEEEeCCc
Q 025672 12 GKVALLTGGGSGIGFEISLQLGKHGA---AIAIMGRRK 46 (249)
Q Consensus 12 ~k~~lItGa~~giG~~~a~~l~~~G~---~v~l~~r~~ 46 (249)
...|.|.||||-+|.++.+.|.++++ ++..++.+.
T Consensus 2 ~mnVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s~~ 39 (144)
T d2hjsa1 2 PLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAE 39 (144)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTT
T ss_pred CCEEEEECCCCHHHHHHHHHHHhcCCCceEEEEEeecc
Confidence 45689999999999999999987654 676665443
|
| >d1xvaa_ c.66.1.5 (A:) Glycine N-methyltransferase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Glycine N-methyltransferase domain: Glycine N-methyltransferase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=85.97 E-value=0.39 Score=36.76 Aligned_cols=46 Identities=17% Similarity=0.213 Sum_probs=36.4
Q ss_pred CcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcC
Q 025672 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG 60 (249)
Q Consensus 12 ~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~ 60 (249)
++++|=.|++.|. ++..|+++|++|+.+|.+++-++...+.....+
T Consensus 57 ~~~vLD~GcG~G~---~~~~la~~g~~v~gvD~S~~ml~~A~~~~~~~~ 102 (292)
T d1xvaa_ 57 CHRVLDVACGTGV---DSIMLVEEGFSVTSVDASDKMLKYALKERWNRR 102 (292)
T ss_dssp CCEEEESSCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT
T ss_pred CCEEEEecCCCcH---HHHHHHHcCCeeeeccCchHHHHHHHHHHHhcc
Confidence 5789999988774 467788899999999999988877766665443
|
| >d1wg8a2 c.66.1.23 (A:5-108,A:207-284) TM0872, methyltransferase domain {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: MraW-like putative methyltransferases domain: TM0872, methyltransferase domain species: Thermus thermophilus [TaxId: 274]
Probab=85.90 E-value=1.6 Score=30.85 Aligned_cols=74 Identities=9% Similarity=0.040 Sum_probs=48.7
Q ss_pred cCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCccEEEEcCC
Q 025672 19 GGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAA 98 (249)
Q Consensus 19 Ga~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag 98 (249)
-+|-|-|-+ ++.+++++.+|+.+||+++.++.... . ...++.+++.+.++.++ .+... ..+.+|+|+..-|
T Consensus 24 D~T~G~GGh-s~~iL~~~~~viaiD~D~~ai~~a~~-~--~~~~~~~~~~~f~~~~~---~l~~~--~~~~vdgIl~DLG 94 (182)
T d1wg8a2 24 DATLGGAGH-ARGILERGGRVIGLDQDPEAVARAKG-L--HLPGLTVVQGNFRHLKR---HLAAL--GVERVDGILADLG 94 (182)
T ss_dssp ETTCTTSHH-HHHHHHTTCEEEEEESCHHHHHHHHH-T--CCTTEEEEESCGGGHHH---HHHHT--TCSCEEEEEEECS
T ss_pred EeCCCCcHH-HHHHhcccCcEEEEhhhhhHHHHHhh-c--cccceeEeehHHHHHHH---HHHHc--CCCccCEEEEEcc
Confidence 344444444 45556677799999999877655443 2 34578999988887444 33222 1368999999998
Q ss_pred CCC
Q 025672 99 GNF 101 (249)
Q Consensus 99 ~~~ 101 (249)
+..
T Consensus 95 vSs 97 (182)
T d1wg8a2 95 VSS 97 (182)
T ss_dssp CCH
T ss_pred CCH
Confidence 754
|
| >d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: p-Hydroxybenzoate hydroxylase, PHBH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=85.81 E-value=0.33 Score=36.78 Aligned_cols=33 Identities=24% Similarity=0.364 Sum_probs=29.1
Q ss_pred EEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcc
Q 025672 14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT 47 (249)
Q Consensus 14 ~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~ 47 (249)
.|+|+||+ -.|..+|..|.++|.+|+++.++.+
T Consensus 4 ~V~IvGaG-p~Gl~~A~~L~~~G~~v~vlE~~~~ 36 (292)
T d1k0ia1 4 QVAIIGAG-PSGLLLGQLLHKAGIDNVILERQTP 36 (292)
T ss_dssp SEEEECCS-HHHHHHHHHHHHHTCCEEEECSSCH
T ss_pred CEEEECcC-HHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 47888876 8899999999999999999998764
|
| >d2b3ta1 c.66.1.30 (A:2-275) N5-glutamine methyltransferase, HemK {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: N5-glutamine methyltransferase, HemK domain: N5-glutamine methyltransferase, HemK species: Escherichia coli [TaxId: 562]
Probab=85.78 E-value=1.6 Score=32.98 Aligned_cols=76 Identities=16% Similarity=0.074 Sum_probs=52.4
Q ss_pred cEEEEecCC-CchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCC-CeeEEEccCCCHHHHHHHHHHHHHHhCCc
Q 025672 13 KVALLTGGG-SGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGI-PAIGLEGDVRKREDAVRVVESTINHFGKL 90 (249)
Q Consensus 13 k~~lItGa~-~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 90 (249)
..+|=.|++ |-||.+++..+ ...+|+.+|.++..++-..+-+...+. ++.+++.|+.+.-. ..++
T Consensus 110 ~~vlDlGtGSG~I~i~la~~~--p~~~v~avDis~~Al~~A~~Na~~~~~~~v~~~~~d~~~~~~-----------~~~f 176 (274)
T d2b3ta1 110 CRILDLGTGTGAIALALASER--PDCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSALA-----------GQQF 176 (274)
T ss_dssp CEEEEETCTTSHHHHHHHHHC--TTSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTGGGT-----------TCCE
T ss_pred cceeeeehhhhHHHHHHHhhC--CcceeeeccchhHHHhHHHHHHHHhCcccceeeecccccccC-----------CCce
Confidence 345555555 44555555443 356899999998888777776665554 69999999876421 1479
Q ss_pred cEEEEcCCCCC
Q 025672 91 DILVNAAAGNF 101 (249)
Q Consensus 91 d~vi~~ag~~~ 101 (249)
|+||.|+-+.+
T Consensus 177 DlIvsNPPYi~ 187 (274)
T d2b3ta1 177 AMIVSNPPYID 187 (274)
T ss_dssp EEEEECCCCBC
T ss_pred eEEEecchhhh
Confidence 99999988754
|
| >d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: C-terminal domain of adrenodoxin reductase-like domain: Dihydropyrimidine dehydrogenase, domain 3 species: Pig (Sus scrofa) [TaxId: 9823]
Probab=85.55 E-value=1.2 Score=30.53 Aligned_cols=34 Identities=15% Similarity=0.276 Sum_probs=26.5
Q ss_pred CcEEEEecCCCchhHHHHHHHHHcCCe-EEEEeCCc
Q 025672 12 GKVALLTGGGSGIGFEISLQLGKHGAA-IAIMGRRK 46 (249)
Q Consensus 12 ~k~~lItGa~~giG~~~a~~l~~~G~~-v~l~~r~~ 46 (249)
++.|+|+|| |..|..+|..+.+.|++ |+++.|+.
T Consensus 45 ~~kVvVIGG-GdtA~D~A~~a~r~GA~~V~vi~rr~ 79 (153)
T d1gtea3 45 RGAVIVLGA-GDTAFDCATSALRCGARRVFLVFRKG 79 (153)
T ss_dssp CSEEEEECS-SHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred CCEEEEECC-ChhHHHHHHHHHHcCCcceeEEEeCC
Confidence 455777765 48899999999999985 77887754
|
| >d1m6ia2 c.3.1.5 (A:264-400) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Apoptosis-inducing factor (AIF) species: Human (Homo sapiens) [TaxId: 9606]
Probab=85.54 E-value=1.2 Score=29.78 Aligned_cols=35 Identities=26% Similarity=0.363 Sum_probs=27.9
Q ss_pred CcEEEEecCCCchhHHHHHHHHH----cCCeEEEEeCCcc
Q 025672 12 GKVALLTGGGSGIGFEISLQLGK----HGAAIAIMGRRKT 47 (249)
Q Consensus 12 ~k~~lItGa~~giG~~~a~~l~~----~G~~v~l~~r~~~ 47 (249)
.|+++|.|| |.+|.++|..|++ .|.+|+++.++..
T Consensus 37 ~k~i~IvGg-G~~G~E~A~~l~~~~~~~g~~Vt~i~~~~~ 75 (137)
T d1m6ia2 37 VKSITIIGG-GFLGSELACALGRKARALGTEVIQLFPEKG 75 (137)
T ss_dssp CSEEEEECC-SHHHHHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred CCEEEEECC-CHHHHHHHHHHHHHHHhcCCEEEEeccccc
Confidence 578888876 6999999988863 5889999887543
|
| >d1krwa_ c.23.1.1 (A:) NTRC receiver domain {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: CheY-like family: CheY-related domain: NTRC receiver domain species: Salmonella typhimurium [TaxId: 90371]
Probab=85.09 E-value=3.4 Score=26.70 Aligned_cols=83 Identities=12% Similarity=0.131 Sum_probs=53.2
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCc
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 90 (249)
+..++||.--...+...+...|-+.|++|..+..-. +..+.+......+.+....+-+.+-+ .+++++++.++.+
T Consensus 2 ~k~~ILIVDDd~~~~~~l~~~L~~~g~~v~~a~~~~----~a~~~l~~~~~dlii~D~~mp~~~G~-el~~~l~~~~~~~ 76 (123)
T d1krwa_ 2 QRGIVWVVDDDSSIRWVLERALAGAGLTCTTFENGN----EVLAALASKTPDVLLSDIRMPGMDGL-ALLKQIKQRHPML 76 (123)
T ss_dssp CCCEEEEESSSHHHHHHHHHHHHHTTCEEEEESSSH----HHHHHHTTCCCSEEEECCSSSSSTTH-HHHHHHHHHSSSC
T ss_pred CCCEEEEEECCHHHHHHHHHHHHHCCCEEEEeCCHH----HHHHHHHhCCCCEEEehhhcCCchHH-HHHHHHHHhCCCC
Confidence 456799999999999999999999999998765433 33344444333444443333333333 4566777776666
Q ss_pred cEEEEcCC
Q 025672 91 DILVNAAA 98 (249)
Q Consensus 91 d~vi~~ag 98 (249)
-+++..+-
T Consensus 77 piI~~t~~ 84 (123)
T d1krwa_ 77 PVIIMTAH 84 (123)
T ss_dssp CEEESCCC
T ss_pred eEEEEecC
Confidence 66665543
|
| >d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: HI0933 N-terminal domain-like domain: Flavoprotein BC4706 species: Bacillus cereus [TaxId: 1396]
Probab=84.99 E-value=0.46 Score=34.99 Aligned_cols=34 Identities=18% Similarity=0.456 Sum_probs=28.5
Q ss_pred EEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchH
Q 025672 15 ALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVL 49 (249)
Q Consensus 15 ~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~ 49 (249)
|+|+||. --|..+|..|+++|.+|+++.++....
T Consensus 5 ViIIGaG-~aGl~aA~~la~~G~~V~liEk~~~~g 38 (251)
T d2i0za1 5 VIVIGGG-PSGLMAAIGAAEEGANVLLLDKGNKLG 38 (251)
T ss_dssp EEEECCS-HHHHHHHHHHHHTTCCEEEECSSSSSC
T ss_pred EEEECcC-HHHHHHHHHHHHCCCcEEEEeCCCCCC
Confidence 6777765 788999999999999999999876543
|
| >d1inla_ c.66.1.17 (A:) Spermidine synthase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Spermidine synthase domain: Spermidine synthase species: Thermotoga maritima [TaxId: 2336]
Probab=84.99 E-value=4 Score=31.07 Aligned_cols=41 Identities=24% Similarity=0.316 Sum_probs=29.4
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcC--CeEEEEeCCcchHHHHHH
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHG--AAIAIMGRRKTVLRSAVA 54 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G--~~v~l~~r~~~~~~~~~~ 54 (249)
+.|.|||.|+++| .+++++++.. .+|.++..+++-.+-..+
T Consensus 89 ~pk~VLiiGgG~G---~~~r~~l~~~~~~~i~~VEIDp~Vi~~a~~ 131 (295)
T d1inla_ 89 NPKKVLIIGGGDG---GTLREVLKHDSVEKAILCEVDGLVIEAARK 131 (295)
T ss_dssp SCCEEEEEECTTC---HHHHHHTTSTTCSEEEEEESCHHHHHHHHH
T ss_pred CCceEEEecCCch---HHHHHHHhcCCCceEEEecCCHHHHHHHHH
Confidence 3689999999877 4566777653 479999988776554443
|
| >d2b2ca1 c.66.1.17 (A:3-314) Spermidine synthase {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Spermidine synthase domain: Spermidine synthase species: Caenorhabditis elegans [TaxId: 6239]
Probab=84.85 E-value=3.5 Score=31.67 Aligned_cols=76 Identities=22% Similarity=0.260 Sum_probs=49.8
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcC--CeEEEEeCCcchHHHHHHHHHh-----cCCCeeEEEccCCCHHHHHHHHHHH
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHG--AAIAIMGRRKTVLRSAVAALHS-----LGIPAIGLEGDVRKREDAVRVVEST 83 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G--~~v~l~~r~~~~~~~~~~~~~~-----~~~~~~~~~~Dl~~~~~~~~~~~~~ 83 (249)
+.|.|||.|++.| .+++++++.. .+|.++.-+++-.+-..+.+.. .+.++.++..|-. +. +
T Consensus 106 ~pk~VLIiGgG~G---~~~rellk~~~v~~v~~VEID~~Vv~~a~~~~~~~~~~~~dprv~i~i~Da~------~~---l 173 (312)
T d2b2ca1 106 DPKRVLIIGGGDG---GILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGF------EF---L 173 (312)
T ss_dssp SCCEEEEESCTTS---HHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHH------HH---H
T ss_pred CCCeEEEeCCCch---HHHHHHHHcCCcceEEEEcccHHHHHHHHhhchhhccccCCCCeEEEEchHH------HH---H
Confidence 4688999998876 3566666643 4799999988766655554432 1457777766632 22 2
Q ss_pred HHHhCCccEEEEcCC
Q 025672 84 INHFGKLDILVNAAA 98 (249)
Q Consensus 84 ~~~~~~id~vi~~ag 98 (249)
.+.-.+.|+||...-
T Consensus 174 ~~~~~~yDvII~D~~ 188 (312)
T d2b2ca1 174 KNHKNEFDVIITDSS 188 (312)
T ss_dssp HHCTTCEEEEEECCC
T ss_pred HhCCCCCCEEEEcCC
Confidence 333357999998654
|
| >d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Putidaredoxin reductase species: Pseudomonas putida [TaxId: 303]
Probab=84.71 E-value=0.44 Score=33.28 Aligned_cols=30 Identities=23% Similarity=0.320 Sum_probs=24.1
Q ss_pred CcEEEEecCCCchhHHHHHHHHHcCCeEEEE
Q 025672 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIM 42 (249)
Q Consensus 12 ~k~~lItGa~~giG~~~a~~l~~~G~~v~l~ 42 (249)
++.++|.||. .+|.++|..|.+.|.++.++
T Consensus 3 ~~~VvIIGgG-~~G~e~A~~l~~~g~~v~v~ 32 (185)
T d1q1ra1 3 NDNVVIVGTG-LAGVEVAFGLRASGWEGNIR 32 (185)
T ss_dssp SCEEEEECCS-HHHHHHHHHHHHTTCCSEEE
T ss_pred CCCEEEECCc-HHHHHHHHHHHHcCCceEEE
Confidence 5678888764 99999999999999864443
|
| >d1dusa_ c.66.1.4 (A:) Hypothetical protein MJ0882 {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Hypothetical protein MJ0882 domain: Hypothetical protein MJ0882 species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=84.23 E-value=2.6 Score=29.67 Aligned_cols=76 Identities=13% Similarity=0.103 Sum_probs=55.2
Q ss_pred CCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhc---CCCeeEEEccCCCHHHHHHHHHHHHHH
Q 025672 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL---GIPAIGLEGDVRKREDAVRVVESTINH 86 (249)
Q Consensus 10 l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 86 (249)
..+++||=.|+..| .++..+++.+.+|++++.++...+...+.+... +.++.++..|+.+.-.
T Consensus 51 ~~~~~VLDiGcG~G---~~~~~la~~~~~v~~iD~s~~~i~~a~~n~~~~~l~~~~i~~~~~d~~~~~~----------- 116 (194)
T d1dusa_ 51 DKDDDILDLGCGYG---VIGIALADEVKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENVK----------- 116 (194)
T ss_dssp CTTCEEEEETCTTS---HHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTCT-----------
T ss_pred CCCCeEEEEeecCC---hhHHHHHhhccccceeeeccccchhHHHHHHHhCCccceEEEEEcchhhhhc-----------
Confidence 45788999988877 445677788889999999988777766655433 3468899999864211
Q ss_pred hCCccEEEEcCCC
Q 025672 87 FGKLDILVNAAAG 99 (249)
Q Consensus 87 ~~~id~vi~~ag~ 99 (249)
-+..|+|+.|..+
T Consensus 117 ~~~fD~Ii~~~p~ 129 (194)
T d1dusa_ 117 DRKYNKIITNPPI 129 (194)
T ss_dssp TSCEEEEEECCCS
T ss_pred cCCceEEEEcccE
Confidence 1479999998653
|
| >d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=84.13 E-value=1.3 Score=32.43 Aligned_cols=79 Identities=24% Similarity=0.211 Sum_probs=56.2
Q ss_pred CCcEEEEecCCCchhHHHHHHHHH-cC----CeEEEEeCCcchHHHHHHHHHhc------CCCeeEEEccCCCHHHHHHH
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGK-HG----AAIAIMGRRKTVLRSAVAALHSL------GIPAIGLEGDVRKREDAVRV 79 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~-~G----~~v~l~~r~~~~~~~~~~~~~~~------~~~~~~~~~Dl~~~~~~~~~ 79 (249)
++.+||.+|+.+|--.++..+++. .| .+|+.++++++-.+...+.+... -.++.++..|..+-
T Consensus 80 ~g~~VLeIGtGsGY~ta~la~l~g~~g~~~~~~V~~iE~~~~l~~~a~~~l~~~~~~~~~~~nv~~~~~d~~~~------ 153 (223)
T d1r18a_ 80 PGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKG------ 153 (223)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGC------
T ss_pred CCCeEEEecCCCCHHHHHHHHHhhhccCCcccEEEEEecCHHHHHHHHHhhhhcchhhcCccEEEEEecccccc------
Confidence 478999999999988888777764 44 48999999887666554443221 24688888887641
Q ss_pred HHHHHHHhCCccEEEEcCCC
Q 025672 80 VESTINHFGKLDILVNAAAG 99 (249)
Q Consensus 80 ~~~~~~~~~~id~vi~~ag~ 99 (249)
....++.|.|+.+++.
T Consensus 154 ----~~~~~~fD~Iiv~~a~ 169 (223)
T d1r18a_ 154 ----YPPNAPYNAIHVGAAA 169 (223)
T ss_dssp ----CGGGCSEEEEEECSCB
T ss_pred ----cccccceeeEEEEeec
Confidence 1223689999998874
|
| >d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Escherichia coli [TaxId: 562]
Probab=83.71 E-value=0.54 Score=33.88 Aligned_cols=31 Identities=16% Similarity=0.234 Sum_probs=27.0
Q ss_pred EEEecCCCchhHHHHHHHHHcCCeEEEEeCCc
Q 025672 15 ALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK 46 (249)
Q Consensus 15 ~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~ 46 (249)
++|+|| |..|...|..+++.|.+|+++.++.
T Consensus 5 vvVIG~-G~aG~~aA~~a~~~G~kV~iiE~~~ 35 (217)
T d1gesa1 5 YIAIGG-GSGGIASINRAAMYGQKCALIEAKE 35 (217)
T ss_dssp EEEECC-SHHHHHHHHHHHTTTCCEEEEESSC
T ss_pred EEEECC-CHHHHHHHHHHHHCCCEEEEEeccC
Confidence 577877 6889999999999999999998753
|
| >d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=83.57 E-value=0.82 Score=31.19 Aligned_cols=35 Identities=6% Similarity=0.009 Sum_probs=26.4
Q ss_pred cEEEEecCCCchhHHHHHHHHHcCC----eEEEEeCCcc
Q 025672 13 KVALLTGGGSGIGFEISLQLGKHGA----AIAIMGRRKT 47 (249)
Q Consensus 13 k~~lItGa~~giG~~~a~~l~~~G~----~v~l~~r~~~ 47 (249)
|.+.|.||||-+|+.+.+.|+++.. ++++..++..
T Consensus 2 kkVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s 40 (146)
T d1t4ba1 2 QNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQL 40 (146)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSST
T ss_pred cEEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeecccc
Confidence 3578999999999999998887642 5666665543
|
| >d1xj5a_ c.66.1.17 (A:) Spermidine synthase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Spermidine synthase domain: Spermidine synthase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=83.29 E-value=4.1 Score=30.88 Aligned_cols=41 Identities=24% Similarity=0.418 Sum_probs=28.7
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHc-C-CeEEEEeCCcchHHHHHH
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKH-G-AAIAIMGRRKTVLRSAVA 54 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~-G-~~v~l~~r~~~~~~~~~~ 54 (249)
+.|.|||.|+++| .+++++++. + .+|.++.-+++-.+-..+
T Consensus 80 ~pk~VLiiGgG~G---~~~r~~l~~~~~~~i~~VEiD~~Vi~~~~~ 122 (290)
T d1xj5a_ 80 NPKKVLVIGGGDG---GVLREVARHASIEQIDMCEIDKMVVDVSKQ 122 (290)
T ss_dssp CCCEEEEETCSSS---HHHHHHTTCTTCCEEEEEESCHHHHHHHHH
T ss_pred CCcceEEecCCch---HHHHHHHhcccceeeEEecCCHHHHHHHHH
Confidence 3578999998877 346666665 4 379999988776555444
|
| >d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: HI0933 N-terminal domain-like domain: Hypothetical protein HI0933 species: Haemophilus influenzae [TaxId: 727]
Probab=83.20 E-value=0.68 Score=34.33 Aligned_cols=37 Identities=24% Similarity=0.462 Sum_probs=30.1
Q ss_pred EEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHH
Q 025672 15 ALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSA 52 (249)
Q Consensus 15 ~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~ 52 (249)
++|+||. .-|...|..|+++|.+|+++.++.....++
T Consensus 7 ViIIGaG-~aGl~aA~~la~~G~~V~vlEk~~~~G~k~ 43 (253)
T d2gqfa1 7 NIIIGAG-AAGLFCAAQLAKLGKSVTVFDNGKKIGRKI 43 (253)
T ss_dssp EEEECCS-HHHHHHHHHHHHTTCCEEEECSSSSSCHHH
T ss_pred EEEECcC-HHHHHHHHHHHHCCCcEEEEecCCCCCCce
Confidence 6777765 778899999999999999999987655443
|
| >d2o57a1 c.66.1.18 (A:16-297) Putative sarcosine dimethylglycine methyltransferase {Red algae (Galdieria sulphuraria) [TaxId: 130081]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Mycolic acid cyclopropane synthase domain: Putative sarcosine dimethylglycine methyltransferase species: Red algae (Galdieria sulphuraria) [TaxId: 130081]
Probab=83.18 E-value=2.4 Score=31.79 Aligned_cols=76 Identities=14% Similarity=0.026 Sum_probs=54.4
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHc-CCeEEEEeCCcchHHHHHHHHHhcC--CCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKH-GAAIAIMGRRKTVLRSAVAALHSLG--IPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~-G~~v~l~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
++.++|=.|++.|. ++..|+++ |++|+.++-++..++...+.....+ .++.++.+|..+..- .-
T Consensus 67 ~~~~vLDiGcG~G~---~~~~la~~~~~~v~gvD~s~~~i~~a~~~~~~~gl~~~v~~~~~d~~~l~~----------~~ 133 (282)
T d2o57a1 67 RQAKGLDLGAGYGG---AARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIPC----------ED 133 (282)
T ss_dssp TTCEEEEETCTTSH---HHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCSS----------CT
T ss_pred CCCEEEEeCCCCcH---HHhhhhccCCcEEEEEeccchhhhhhhcccccccccccccccccccccccc----------cc
Confidence 47889989887662 45556654 8899999999887777776665543 579999999876420 11
Q ss_pred CCccEEEEcCCC
Q 025672 88 GKLDILVNAAAG 99 (249)
Q Consensus 88 ~~id~vi~~ag~ 99 (249)
+..|+|+..-..
T Consensus 134 ~sfD~V~~~~~l 145 (282)
T d2o57a1 134 NSYDFIWSQDAF 145 (282)
T ss_dssp TCEEEEEEESCG
T ss_pred cccchhhccchh
Confidence 478999876553
|
| >d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Lysine-specific histone demethylase 1, LSD1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=83.12 E-value=0.88 Score=34.49 Aligned_cols=35 Identities=23% Similarity=0.420 Sum_probs=28.0
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCc
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK 46 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~ 46 (249)
+.+.|+|+||. -=|...|.+|.++|++|+++..+.
T Consensus 4 ~~~kViVIGaG-~aGL~aA~~L~~~G~~V~VlEa~~ 38 (449)
T d2dw4a2 4 KTGKVIIIGSG-VSGLAAARQLQSFGMDVTLLEARD 38 (449)
T ss_dssp CCCEEEEECCB-HHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCCcEEEECCC-HHHHHHHHHHHhCCCCEEEEeCCC
Confidence 34568888875 558899999999999999987653
|
| >d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hypothetical protein TM1727 species: Thermotoga maritima [TaxId: 2336]
Probab=83.11 E-value=0.19 Score=34.48 Aligned_cols=37 Identities=14% Similarity=-0.028 Sum_probs=26.7
Q ss_pred CCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHH
Q 025672 20 GGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAAL 56 (249)
Q Consensus 20 a~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~ 56 (249)
|+|-+|+++++.|.+.+..+.+.+|+.++.+++.++.
T Consensus 6 G~G~mg~~l~~~L~~~~~~~~v~~R~~~~~~~l~~~~ 42 (153)
T d2i76a2 6 GTGTLTRFFLECLKDRYEIGYILSRSIDRARNLAEVY 42 (153)
T ss_dssp SCCHHHHHHHHTTC----CCCEECSSHHHHHHHHHHT
T ss_pred eCcHHHHHHHHHHHhCCCEEEEEeCChhhhcchhhcc
Confidence 4568999999988664444568899999888887765
|
| >d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain domain: Flavocytochrome c3 (respiratory fumarate reductase) species: Shewanella frigidimarina [TaxId: 56812]
Probab=82.84 E-value=0.61 Score=35.60 Aligned_cols=30 Identities=20% Similarity=0.562 Sum_probs=25.9
Q ss_pred EEEecCCCchhHHHHHHHHHcCCeEEEEeCC
Q 025672 15 ALLTGGGSGIGFEISLQLGKHGAAIAIMGRR 45 (249)
Q Consensus 15 ~lItGa~~giG~~~a~~l~~~G~~v~l~~r~ 45 (249)
|+|+|+ |..|...|.+|+++|.+|+++.+.
T Consensus 19 VlVIG~-G~aGl~aA~~la~~G~~V~lvEK~ 48 (308)
T d1y0pa2 19 VVVVGS-GGAGFSAAISATDSGAKVILIEKE 48 (308)
T ss_dssp EEEECC-SHHHHHHHHHHHHTTCCEEEECSS
T ss_pred EEEECc-CHHHHHHHHHHHHCCCcEEEEecC
Confidence 577765 488999999999999999999874
|
| >d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-epi-vancosaminyltransferase GtfA species: Amycolatopsis orientalis [TaxId: 31958]
Probab=82.71 E-value=2.3 Score=32.79 Aligned_cols=32 Identities=19% Similarity=0.231 Sum_probs=22.8
Q ss_pred cEEEEecCCCchh---HHHHHHHHHcCCeEEEEeC
Q 025672 13 KVALLTGGGSGIG---FEISLQLGKHGAAIAIMGR 44 (249)
Q Consensus 13 k~~lItGa~~giG---~~~a~~l~~~G~~v~l~~r 44 (249)
|+++.++||+|== .++|++|.++|++|+++..
T Consensus 2 ril~~~~gt~Ghi~P~laLA~~L~~rGh~V~~~~~ 36 (391)
T d1pn3a_ 2 RVLITGCGSRGDTEPLVALAARLRELGADARMCLP 36 (391)
T ss_dssp EEEEEEESSHHHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred EEEEEcCCChhHHHHHHHHHHHHHHCCCEEEEEEC
Confidence 4455566664322 3689999999999998874
|
| >d1w4xa2 c.3.1.5 (A:155-389) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Phenylacetone monooxygenase species: Thermobifida fusca [TaxId: 2021]
Probab=82.68 E-value=0.81 Score=33.07 Aligned_cols=39 Identities=26% Similarity=0.369 Sum_probs=32.7
Q ss_pred CCCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCc
Q 025672 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK 46 (249)
Q Consensus 7 ~~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~ 46 (249)
..+++||.|+|.|++. -|..+|..+++.+.+++.+.|+.
T Consensus 27 ~~~~~gK~V~VvG~G~-Sa~dia~~~~~~~~~~~~~~~~~ 65 (235)
T d1w4xa2 27 PVDFSGQRVGVIGTGS-SGIQVSPQIAKQAAELFVFQRTP 65 (235)
T ss_dssp CCCCBTCEEEEECCSH-HHHHHHHHHHHHBSEEEEEESSC
T ss_pred CCCCCCCEEEEECCCc-cHHHHHHHHHhhhcccccccccc
Confidence 3468999999998774 58999999999999988887754
|
| >d1nkva_ c.66.1.21 (A:) Hypothetical Protein YjhP {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Hypothetical Protein YjhP domain: Hypothetical Protein YjhP species: Escherichia coli [TaxId: 562]
Probab=82.48 E-value=3.2 Score=30.25 Aligned_cols=76 Identities=20% Similarity=0.127 Sum_probs=53.6
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHc-CCeEEEEeCCcchHHHHHHHHHhcC--CCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKH-GAAIAIMGRRKTVLRSAVAALHSLG--IPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~-G~~v~l~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
.|++||=.|+..| .++..|+++ |++|+.++-++..++...+.....+ .++.++..|+.+.. . -
T Consensus 33 pg~~VLDiGCG~G---~~~~~la~~~~~~v~GvD~s~~~~~~ar~~~~~~gl~~~v~~~~~d~~~~~-----~------~ 98 (245)
T d1nkva_ 33 PGTRILDLGSGSG---EMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYV-----A------N 98 (245)
T ss_dssp TTCEEEEETCTTC---HHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCC-----C------S
T ss_pred CCCEEEEEcCCCC---HHHHHHHHhcCCEEEEEecccchhhHHHHHHHHhhccccchhhhhHHhhcc-----c------c
Confidence 3788888888766 345566654 8899999999887776666655544 56899999987631 0 1
Q ss_pred CCccEEEEcCCCC
Q 025672 88 GKLDILVNAAAGN 100 (249)
Q Consensus 88 ~~id~vi~~ag~~ 100 (249)
++.|.|+..-...
T Consensus 99 ~~fD~v~~~~~~~ 111 (245)
T d1nkva_ 99 EKCDVAACVGATW 111 (245)
T ss_dssp SCEEEEEEESCGG
T ss_pred CceeEEEEEehhh
Confidence 4789888765543
|
| >d1mjfa_ c.66.1.17 (A:) Putative spermidine synthetase PF0127 (SpeE) {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Spermidine synthase domain: Putative spermidine synthetase PF0127 (SpeE) species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=82.41 E-value=4.9 Score=30.18 Aligned_cols=75 Identities=17% Similarity=0.245 Sum_probs=47.2
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHH-----------hcCCCeeEEEccCCCHHHHHH
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALH-----------SLGIPAIGLEGDVRKREDAVR 78 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~-~v~l~~r~~~~~~~~~~~~~-----------~~~~~~~~~~~Dl~~~~~~~~ 78 (249)
+.+.+||.|+++| .+++++++.+. +|.++.-+++-.+-..+.+. ..+.++.++..|..+
T Consensus 72 ~p~~vLiiG~G~G---~~~~~~l~~~~~~v~~VEiD~~Vi~~a~~~f~~~~~~~~~~~~~~d~rv~i~~~Da~~------ 142 (276)
T d1mjfa_ 72 KPKRVLVIGGGDG---GTVREVLQHDVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGFE------ 142 (276)
T ss_dssp CCCEEEEEECTTS---HHHHHHTTSCCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCHHH------
T ss_pred CCceEEEecCCch---HHHHHHHHhCCceEEEecCCHHHHHHHHHhhhhccchhhhhhccCCCCceEEEChHHH------
Confidence 4689999998876 33455555554 68888888765544433221 125678888777631
Q ss_pred HHHHHHHHhCCccEEEEcCC
Q 025672 79 VVESTINHFGKLDILVNAAA 98 (249)
Q Consensus 79 ~~~~~~~~~~~id~vi~~ag 98 (249)
.++ ...+.|+||....
T Consensus 143 ~l~----~~~~yDvIi~D~~ 158 (276)
T d1mjfa_ 143 FIK----NNRGFDVIIADST 158 (276)
T ss_dssp HHH----HCCCEEEEEEECC
T ss_pred HHh----ccCCCCEEEEeCC
Confidence 222 2367999998664
|
| >d1dxla1 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Garden pea (Pisum sativum) [TaxId: 3888]
Probab=82.30 E-value=0.67 Score=33.32 Aligned_cols=31 Identities=16% Similarity=0.385 Sum_probs=26.9
Q ss_pred EEEecCCCchhHHHHHHHHHcCCeEEEEeCCc
Q 025672 15 ALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK 46 (249)
Q Consensus 15 ~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~ 46 (249)
++|+|| |-.|...|..+++.|.+|+++.++.
T Consensus 6 vvVIGg-GpaGl~aA~~aa~~G~kV~vie~~~ 36 (221)
T d1dxla1 6 VVIIGG-GPGGYVAAIKAAQLGFKTTCIEKRG 36 (221)
T ss_dssp EEEECC-SHHHHHHHHHHHHHTCCEEEEECSS
T ss_pred EEEECC-CHHHHHHHHHHHHCCCcEEEEEecC
Confidence 678887 4679999999999999999998764
|
| >d1c4oa2 c.37.1.19 (A:410-583) Nucleotide excision repair enzyme UvrB {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Tandem AAA-ATPase domain domain: Nucleotide excision repair enzyme UvrB species: Thermus thermophilus [TaxId: 274]
Probab=82.28 E-value=3.3 Score=28.89 Aligned_cols=64 Identities=16% Similarity=0.095 Sum_probs=50.3
Q ss_pred HHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCccEEEEcCCC
Q 025672 33 GKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAG 99 (249)
Q Consensus 33 ~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~ 99 (249)
..+|.++++.+.+....+.+.+.+...|-++..++.++.+.+- +++++++.+ |.++++|...-.
T Consensus 28 ~~~g~r~lvfc~t~~~~~~l~~~L~~~Gi~a~~~Hg~~~~~eR-~~~l~~F~~--G~~~vLVaT~v~ 91 (174)
T d1c4oa2 28 AARGERTLVTVLTVRMAEELTSFLVEHGIRARYLHHELDAFKR-QALIRDLRL--GHYDCLVGINLL 91 (174)
T ss_dssp HHTTCEEEEECSSHHHHHHHHHHHHHTTCCEEEECTTCCHHHH-HHHHHHHHT--TSCSEEEESCCC
T ss_pred HhcCCcEEEEEcchhHHHHHHHHHHhcCCceEEEecccchHHH-HHHHHHHHC--CCeEEEEeeeee
Confidence 3568899999999999999999999999999999999986543 333444432 789999986543
|
| >d1v71a1 c.79.1.1 (A:6-323) Hypothetical protein C320.14 (SPCC320.14, SPCC330.15c) {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes family: Tryptophan synthase beta subunit-like PLP-dependent enzymes domain: Hypothetical protein C320.14 (SPCC320.14, SPCC330.15c) species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=82.25 E-value=5.8 Score=30.06 Aligned_cols=54 Identities=20% Similarity=0.134 Sum_probs=34.3
Q ss_pred EEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEc
Q 025672 14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEG 68 (249)
Q Consensus 14 ~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~ 68 (249)
..+|+..+|.-|.++|..-...|.+++++-..... +...+.++..|.++..+.-
T Consensus 70 ~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~-~~k~~~l~~~Ga~vi~~~~ 123 (318)
T d1v71a1 70 AGVLTFSSGNHAQAIALSAKILGIPAKIIMPLDAP-EAKVAATKGYGGQVIMYDR 123 (318)
T ss_dssp HCEEECCSSHHHHHHHHHHHHTTCCEEEEEETTCC-HHHHHHHHHTTCEEEEECT
T ss_pred ceeeeeccchhhHHHHHhhcccccceeeccccccc-HHHHHHHHHcCCcEEeccC
Confidence 34788888999999999999999875554322221 2234445555665555433
|
| >d1yb2a1 c.66.1.13 (A:6-255) Hypothetical protein Ta0852 {Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: tRNA(1-methyladenosine) methyltransferase-like domain: Hypothetical protein Ta0852 species: Thermoplasma acidophilum [TaxId: 2303]
Probab=82.20 E-value=3 Score=30.98 Aligned_cols=75 Identities=19% Similarity=0.172 Sum_probs=54.0
Q ss_pred CCcEEEEecCCCc-hhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhc--CCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 11 KGKVALLTGGGSG-IGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 11 ~~k~~lItGa~~g-iG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
.|.+||=.|+.+| +...+|+.+.. +.+|+.++++++.++...+.+... ..++.+...|+.+.-. -
T Consensus 85 pG~rVLEiG~GsG~lt~~la~~v~~-~g~V~~vD~~e~~~~~A~~n~~~~~~~~nv~~~~~Di~~~~~-----------~ 152 (250)
T d1yb2a1 85 PGMDILEVGVGSGNMSSYILYALNG-KGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIADFIS-----------D 152 (250)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHTT-SSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTTCCC-----------S
T ss_pred CcCEEEEeeeeCcHHHHHHHHHhCC-CcEEEEEECCHHHHHHHHHHHHHhcCCCceEEEEeeeecccc-----------c
Confidence 4789999998877 34455555443 348999999999899888888754 3578899999876310 1
Q ss_pred CCccEEEEcC
Q 025672 88 GKLDILVNAA 97 (249)
Q Consensus 88 ~~id~vi~~a 97 (249)
..+|.|+.+.
T Consensus 153 ~~fD~V~ld~ 162 (250)
T d1yb2a1 153 QMYDAVIADI 162 (250)
T ss_dssp CCEEEEEECC
T ss_pred ceeeeeeecC
Confidence 3689988753
|
| >d2p7ia1 c.66.1.41 (A:22-246) Hypothetical protein ECA1738 {Erwinia carotovora [TaxId: 554]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: UbiE/COQ5-like domain: Hypothetical protein ECA1738 species: Erwinia carotovora [TaxId: 554]
Probab=82.06 E-value=0.91 Score=33.04 Aligned_cols=71 Identities=14% Similarity=0.107 Sum_probs=50.8
Q ss_pred CCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCC
Q 025672 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK 89 (249)
Q Consensus 10 l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 89 (249)
+++++||=.|++.| .+++.|+++|++|+.++.+++.++...+.. ...+.++..|+.+.. .-++
T Consensus 19 ~~~~~VLDiGcG~G---~~~~~l~~~g~~v~giD~s~~~i~~a~~~~---~~~~~~~~~~~~~~~-----------~~~~ 81 (225)
T d2p7ia1 19 FRPGNLLELGSFKG---DFTSRLQEHFNDITCVEASEEAISHAQGRL---KDGITYIHSRFEDAQ-----------LPRR 81 (225)
T ss_dssp CCSSCEEEESCTTS---HHHHHHTTTCSCEEEEESCHHHHHHHHHHS---CSCEEEEESCGGGCC-----------CSSC
T ss_pred CCCCcEEEEeCCCc---HHHHHHHHcCCeEEEEeCcHHHhhhhhccc---ccccccccccccccc-----------cccc
Confidence 56888999988876 345678889999999999887776655443 335788888765431 0146
Q ss_pred ccEEEEcC
Q 025672 90 LDILVNAA 97 (249)
Q Consensus 90 id~vi~~a 97 (249)
.|+|+...
T Consensus 82 fD~I~~~~ 89 (225)
T d2p7ia1 82 YDNIVLTH 89 (225)
T ss_dssp EEEEEEES
T ss_pred cccccccc
Confidence 89888654
|
| >d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC species: Thermotoga maritima [TaxId: 2336]
Probab=81.75 E-value=0.68 Score=32.73 Aligned_cols=32 Identities=25% Similarity=0.309 Sum_probs=25.7
Q ss_pred EEEEecCCCchhHHHHHHHHHcCC-eEEEEeCC
Q 025672 14 VALLTGGGSGIGFEISLQLGKHGA-AIAIMGRR 45 (249)
Q Consensus 14 ~~lItGa~~giG~~~a~~l~~~G~-~v~l~~r~ 45 (249)
+|.|.||||-+|.++.+.|..+-. ++..+..+
T Consensus 3 kVaIvGATGyvG~eLirlL~~HP~~ei~~l~s~ 35 (176)
T d1vkna1 3 RAGIIGATGYTGLELVRLLKNHPEAKITYLSSR 35 (176)
T ss_dssp EEEEESTTSHHHHHHHHHHHHCTTEEEEEEECS
T ss_pred EEEEECCCcHHHHHHHHHHHhCCCceEEEeecc
Confidence 589999999999999999998765 55554433
|
| >d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: UDP-galactopyranose mutase, N-terminal domain domain: UDP-galactopyranose mutase, N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=81.72 E-value=0.64 Score=35.62 Aligned_cols=33 Identities=18% Similarity=0.307 Sum_probs=27.2
Q ss_pred EEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcc
Q 025672 14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT 47 (249)
Q Consensus 14 ~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~ 47 (249)
-++|+||. --|..+|++|++.|.+|.++.++..
T Consensus 3 dv~IIGaG-~sGl~~A~~L~~~g~~V~iiEk~~~ 35 (298)
T d1i8ta1 3 DYIIVGSG-LFGAVCANELKKLNKKVLVIEKRNH 35 (298)
T ss_dssp EEEEECCS-HHHHHHHHHHGGGTCCEEEECSSSS
T ss_pred cEEEECCc-HHHHHHHHHHHhCCCcEEEEECCCC
Confidence 36788764 7799999999999999999987643
|
| >d1v59a1 c.3.1.5 (A:1-160,A:283-355) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=81.48 E-value=0.71 Score=33.40 Aligned_cols=32 Identities=22% Similarity=0.487 Sum_probs=26.6
Q ss_pred EEEecCCCchhHHHHHHHHHcCCeEEEEeCCcc
Q 025672 15 ALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT 47 (249)
Q Consensus 15 ~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~ 47 (249)
++|+|+. --|...|..+++.|.+|++++++..
T Consensus 8 viVIG~G-pAGl~aA~~aa~~G~kV~lie~~~~ 39 (233)
T d1v59a1 8 VVIIGGG-PAGYVAAIKAAQLGFNTACVEKRGK 39 (233)
T ss_dssp EEEECCS-HHHHHHHHHHHHTTCCEEEEESSSS
T ss_pred EEEECCC-HHHHHHHHHHHHCCCcEEEEEecCC
Confidence 5677774 6699999999999999999987543
|
| >d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: UDP-glucose dehydrogenase (UDPGDH) species: Streptococcus pyogenes [TaxId: 1314]
Probab=81.46 E-value=0.83 Score=32.52 Aligned_cols=37 Identities=11% Similarity=0.208 Sum_probs=29.6
Q ss_pred EEEecCCCchhHHHHHHHHHcCCeEEEEeCCcchHHHHH
Q 025672 15 ALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAV 53 (249)
Q Consensus 15 ~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~~~~~~~ 53 (249)
+.|.| .|-+|..+|..|+ +|++|+.+|-++...+.+.
T Consensus 3 I~ViG-lG~vGl~~a~~~a-~g~~V~g~Din~~~v~~l~ 39 (196)
T d1dlja2 3 IAVAG-SGYVGLSLGVLLS-LQNEVTIVDILPSKVDKIN 39 (196)
T ss_dssp EEEEC-CSHHHHHHHHHHT-TTSEEEEECSCHHHHHHHH
T ss_pred EEEEC-CChhHHHHHHHHH-CCCcEEEEECCHHHHHHHh
Confidence 56665 7899999998665 7999999999987665544
|
| >d1xk7a1 c.123.1.1 (A:4-405) Crotonobetainyl-CoA:carnitine CoA-transferase, CaiB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: CoA-transferase family III (CaiB/BaiF) superfamily: CoA-transferase family III (CaiB/BaiF) family: CoA-transferase family III (CaiB/BaiF) domain: Crotonobetainyl-CoA:carnitine CoA-transferase, CaiB species: Escherichia coli [TaxId: 562]
Probab=81.17 E-value=5 Score=31.67 Aligned_cols=87 Identities=16% Similarity=0.142 Sum_probs=56.3
Q ss_pred CCCCC-CCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCc-c---hHHHHHHHHHhcCCCeeEEEccCCCHHHHHH
Q 025672 4 PFKGD-ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK-T---VLRSAVAALHSLGIPAIGLEGDVRKREDAVR 78 (249)
Q Consensus 4 ~~~~~-~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~-~---~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~ 78 (249)
||+.+ .|+|-+||=.+ ...-|-.+++.|++.|++||=+.+-. . +.....-... +..-+-+.+|+.+++..+.
T Consensus 2 ~~~~~gPL~GirVld~~-~~~agp~~~~~Lad~GAeVIkvE~p~~gd~~r~~~~~~~~~--n~~K~si~ldl~~~~G~~~ 78 (402)
T d1xk7a1 2 PMPKFGPLAGLRVVFSG-IEIAGPFAGQMFAEWGAEVIWIENVAWADTIRVQPNYPQLS--RRNLHALSLNIFKDEGREA 78 (402)
T ss_dssp CCCCCSTTTTCEEEEEC-CSSHHHHHHHHHHHTTCEEEEEECSSSCCGGGGSSSHHHHH--TTTCEEEEECTTSHHHHHH
T ss_pred CCCCCcCCCCCEEEEeC-ChhHHHHHHHHHHHhCCeEEEECCCCCCCccccCCchhHHh--CCCCeEEEEeCcCHHHHHH
Confidence 55554 68888877554 23448899999999999999887532 1 1111111121 2345678889999988655
Q ss_pred HHHHHHHHhCCccEEEEcC
Q 025672 79 VVESTINHFGKLDILVNAA 97 (249)
Q Consensus 79 ~~~~~~~~~~~id~vi~~a 97 (249)
+.+=+ ..-|+||.|-
T Consensus 79 ~~~Lv----~~aDv~i~n~ 93 (402)
T d1xk7a1 79 FLKLM----ETTDIFIEAS 93 (402)
T ss_dssp HHHHH----TTCSEEEEEC
T ss_pred HHHHH----hhcCCceeee
Confidence 54433 4679999873
|
| >d2gh1a1 c.66.1.49 (A:13-293) Methyltransferase BC2162 {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: BC2162-like domain: Methyltransferase BC2162 species: Bacillus cereus [TaxId: 1396]
Probab=81.12 E-value=1.4 Score=33.38 Aligned_cols=75 Identities=27% Similarity=0.207 Sum_probs=55.1
Q ss_pred CCcEEEEecCCCchhHHHHHHHHH---cCCeEEEEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGK---HGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~---~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (249)
++++||=.|++.| .++..|++ .|.+|+.+|.++..++...+.+...+.++.++..|+.+.+ + .
T Consensus 27 ~~~~ILDiGcG~G---~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~f~~~d~~~~~-----~------~ 92 (281)
T d2gh1a1 27 KPVHIVDYGCGYG---YLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPYDSEFLEGDATEIE-----L------N 92 (281)
T ss_dssp SCCEEEEETCTTT---HHHHHHTTTSCTTCEEEEEECCHHHHHHHHHHHHSSSSEEEEEESCTTTCC-----C------S
T ss_pred CcCEEEEecCcCC---HHHHHHHHhCCCCCEEEEEecchhHhhhhhccccccccccccccccccccc-----c------c
Confidence 5678888888766 33344443 5789999999998888888888776778899999987642 0 1
Q ss_pred CCccEEEEcCCC
Q 025672 88 GKLDILVNAAAG 99 (249)
Q Consensus 88 ~~id~vi~~ag~ 99 (249)
+..|+|+.+...
T Consensus 93 ~~fD~v~~~~~l 104 (281)
T d2gh1a1 93 DKYDIAICHAFL 104 (281)
T ss_dssp SCEEEEEEESCG
T ss_pred CCceEEEEehhh
Confidence 468999887654
|
| >d1kl7a_ c.79.1.1 (A:) Threonine synthase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes family: Tryptophan synthase beta subunit-like PLP-dependent enzymes domain: Threonine synthase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=81.03 E-value=3.4 Score=34.13 Aligned_cols=74 Identities=7% Similarity=0.080 Sum_probs=50.1
Q ss_pred CcEEEEecCCCchhHHHHHHHHH-cCCeEEEEeCCcchHHHHHHHHHhc-CCCeeEEEccCCCHHHHHHHHHHHHHH
Q 025672 12 GKVALLTGGGSGIGFEISLQLGK-HGAAIAIMGRRKTVLRSAVAALHSL-GIPAIGLEGDVRKREDAVRVVESTINH 86 (249)
Q Consensus 12 ~k~~lItGa~~giG~~~a~~l~~-~G~~v~l~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 86 (249)
.+..++++.||..|.+.+..+.. .+.+|+++.-+..--+--..++... +..++.+.+| .+.++.+.+++++...
T Consensus 151 ~~~~il~aTSGDTG~Aa~~af~~~~~i~v~vlyP~~~vS~iQ~~Qmtt~~~~Nv~~i~v~-G~fDDcq~~vk~~f~d 226 (511)
T d1kl7a_ 151 KQITVVGATSGDTGSAAIYGLRGKKDVSVFILYPTGRISPIQEEQMTTVPDENVQTLSVT-GTFDNCQDIVKAIFGD 226 (511)
T ss_dssp CCEEEEEECSSSHHHHHHHHHTTCTTEEEEEEEETTSSCHHHHHHHHHCCCTTEEEEEES-SCHHHHHHHHHHHHHC
T ss_pred ceEEEEEecCCCccHHHHHHhcCCCCceeEEeccCCCCchHHHHHHhhcCCceEEEEEec-cChHHHHHHHHHHHhh
Confidence 34455555557899999999984 4557777765432222223444443 5689999999 6899999999988653
|
| >d1ydhb_ c.129.1.1 (B:) Hypothetical protein At5g11950 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MCP/YpsA-like superfamily: MCP/YpsA-like family: MoCo carrier protein-like domain: Hypothetical protein At5g11950 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=81.01 E-value=2.7 Score=29.52 Aligned_cols=27 Identities=33% Similarity=0.389 Sum_probs=14.5
Q ss_pred EEecCCC-chhHHHHHHHHHcCCeEEEE
Q 025672 16 LLTGGGS-GIGFEISLQLGKHGAAIAIM 42 (249)
Q Consensus 16 lItGa~~-giG~~~a~~l~~~G~~v~l~ 42 (249)
+|+||+. |+=.++++...+.|.+|+.+
T Consensus 37 lv~GGG~~GlMga~a~ga~~~gg~viGv 64 (181)
T d1ydhb_ 37 LVYGGGSVGLMGLISRRVYEGGLHVLGI 64 (181)
T ss_dssp EEECCCSSHHHHHHHHHHHHTTCCEEEE
T ss_pred EEECCCchHHHHHHHHhHhhcCCccccc
Confidence 4455433 55556666665555555544
|
| >d1trba1 c.3.1.5 (A:1-118,A:245-316) Thioredoxin reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Thioredoxin reductase species: Escherichia coli [TaxId: 562]
Probab=81.00 E-value=0.49 Score=33.47 Aligned_cols=36 Identities=14% Similarity=0.263 Sum_probs=30.2
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcc
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT 47 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~ 47 (249)
+++.++|+||. -.|...|..+++.|.+|+++.+...
T Consensus 4 k~~dVvIIGGG-paGl~AA~~~ar~g~~v~iie~~~~ 39 (190)
T d1trba1 4 KHSKLLILGSG-PAGYTAAVYAARANLQPVLITGMEK 39 (190)
T ss_dssp EEEEEEEECCS-HHHHHHHHHHHTTTCCCEEECCSST
T ss_pred CCCcEEEECCC-HHHHHHHHHHHHcCCceEEEEeecc
Confidence 46778999876 5899999999999999999987543
|
| >d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Probable oxidoreductase At4g09670 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=80.95 E-value=2.3 Score=29.62 Aligned_cols=71 Identities=14% Similarity=0.075 Sum_probs=44.0
Q ss_pred EEEEecCCCchhHHHHHHHHHc-CCeEE-EEeCCcchHHHHHHHHHhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCcc
Q 025672 14 VALLTGGGSGIGFEISLQLGKH-GAAIA-IMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD 91 (249)
Q Consensus 14 ~~lItGa~~giG~~~a~~l~~~-G~~v~-l~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 91 (249)
++.|+|+ |.+|+..++.|... +.+|+ +++++.++.+...++..- .....+ .++++++++. ..+|
T Consensus 3 ki~iIG~-G~~g~~~~~~l~~~~~~~i~ai~d~~~~~~~~~~~~~~~-~~~~~~-------~~~~~~ll~~-----~~iD 68 (184)
T d1ydwa1 3 RIGVMGC-ADIARKVSRAIHLAPNATISGVASRSLEKAKAFATANNY-PESTKI-------HGSYESLLED-----PEID 68 (184)
T ss_dssp EEEEESC-CTTHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTC-CTTCEE-------ESSHHHHHHC-----TTCC
T ss_pred EEEEEcC-CHHHHHHHHHHHhCCCCEEEEEEeCCccccccchhcccc-ccceee-------cCcHHHhhhc-----cccc
Confidence 4678885 68999999888876 55766 568888777766654421 111222 1244455442 3689
Q ss_pred EEEEcCC
Q 025672 92 ILVNAAA 98 (249)
Q Consensus 92 ~vi~~ag 98 (249)
+|+-+..
T Consensus 69 ~v~I~tp 75 (184)
T d1ydwa1 69 ALYVPLP 75 (184)
T ss_dssp EEEECCC
T ss_pred eeeeccc
Confidence 8877543
|
| >d2afhe1 c.37.1.10 (E:1-289) Nitrogenase iron protein {Azotobacter vinelandii [TaxId: 354]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Nitrogenase iron protein-like domain: Nitrogenase iron protein species: Azotobacter vinelandii [TaxId: 354]
Probab=80.53 E-value=0.71 Score=35.05 Aligned_cols=33 Identities=24% Similarity=0.440 Sum_probs=27.3
Q ss_pred cEEEEecCCCchhHH-----HHHHHHHcCCeEEEEeCCc
Q 025672 13 KVALLTGGGSGIGFE-----ISLQLGKHGAAIAIMGRRK 46 (249)
Q Consensus 13 k~~lItGa~~giG~~-----~a~~l~~~G~~v~l~~r~~ 46 (249)
|++.|.| =||+|+. +|..|+++|.+|.++|-+.
T Consensus 3 r~Iaisg-KGGVGKTT~a~NLA~~LA~~G~rVLlID~Dp 40 (289)
T d2afhe1 3 RQCAIYG-KGGIGKSTTTQNLVAALAEMGKKVMIVGCDP 40 (289)
T ss_dssp EEEEEEE-CTTSSHHHHHHHHHHHHHHTTCCEEEEEECS
T ss_pred cEEEEEC-CCCCCHHHHHHHHHHHHHHCCCCEEEEecCC
Confidence 5667776 8999985 5788999999999998875
|
| >d2o07a1 c.66.1.17 (A:16-300) Spermidine synthase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Spermidine synthase domain: Spermidine synthase species: Human (Homo sapiens) [TaxId: 9606]
Probab=80.29 E-value=6.1 Score=29.79 Aligned_cols=76 Identities=17% Similarity=0.234 Sum_probs=50.2
Q ss_pred CCcEEEEecCCCchhHHHHHHHHHc-C-CeEEEEeCCcchHHHHHHHHHh-----cCCCeeEEEccCCCHHHHHHHHHHH
Q 025672 11 KGKVALLTGGGSGIGFEISLQLGKH-G-AAIAIMGRRKTVLRSAVAALHS-----LGIPAIGLEGDVRKREDAVRVVEST 83 (249)
Q Consensus 11 ~~k~~lItGa~~giG~~~a~~l~~~-G-~~v~l~~r~~~~~~~~~~~~~~-----~~~~~~~~~~Dl~~~~~~~~~~~~~ 83 (249)
..|.+||.|+++| .+++++++. + .+|+++.-+++-.+-..+.+.. .+.++.++..|-. +.+
T Consensus 78 ~pk~vLiiGgG~G---~~~~~~l~~~~~~~v~~vEiD~~Vv~~a~~~~~~~~~~~~d~rv~i~~~Da~---------~~l 145 (285)
T d2o07a1 78 NPRKVLIIGGGDG---GVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGF---------EFM 145 (285)
T ss_dssp SCCEEEEEECTTS---HHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHH---------HHH
T ss_pred CcCeEEEeCCCch---HHHHHHHHcCCcceeeeccCCHHHHHHHHhhchhhccccCCCCceEEEccHH---------HHH
Confidence 4588999998877 456666665 3 4799999887766655544421 2568888877732 222
Q ss_pred HHHhCCccEEEEcCC
Q 025672 84 INHFGKLDILVNAAA 98 (249)
Q Consensus 84 ~~~~~~id~vi~~ag 98 (249)
.+.-.+.|+||...-
T Consensus 146 ~~~~~~yDvIi~D~~ 160 (285)
T d2o07a1 146 KQNQDAFDVIITDSS 160 (285)
T ss_dssp HTCSSCEEEEEEECC
T ss_pred hcCCCCCCEEEEcCC
Confidence 233357999998753
|
| >d1jyea_ c.93.1.1 (A:) Lac-repressor (lacR) core (C-terminal domain) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Periplasmic binding protein-like I superfamily: Periplasmic binding protein-like I family: L-arabinose binding protein-like domain: Lac-repressor (lacR) core (C-terminal domain) species: Escherichia coli [TaxId: 562]
Probab=80.28 E-value=4.2 Score=29.98 Aligned_cols=75 Identities=17% Similarity=-0.013 Sum_probs=44.3
Q ss_pred CchhHHHHHHHHHcCCe-EEEEeCCc------chHHHHHHHHHhcCCCee-EEEccCCCHHHHHHHHHHHHHHhCCccEE
Q 025672 22 SGIGFEISLQLGKHGAA-IAIMGRRK------TVLRSAVAALHSLGIPAI-GLEGDVRKREDAVRVVESTINHFGKLDIL 93 (249)
Q Consensus 22 ~giG~~~a~~l~~~G~~-v~l~~r~~------~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~~~~~~~~id~v 93 (249)
...|+.++.+|.++|++ |.++.-+. ++.+...+.+...+.... ....|. +.++....+.+..+..+.+|.+
T Consensus 103 ~~~~~~~~~~L~~~G~~~i~~i~~~~~~~~~~~R~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ai 181 (271)
T d1jyea_ 103 EDGTRLGVEHLVALGHQQIALLAGPLSSVSARLRLAGWHKYLTRNQIQPIAEREGDW-SAMSGFQQTMQMLNEGIVPTAM 181 (271)
T ss_dssp HHHHHHHHHHHHHHTCCSEEEEECCTTSHHHHHHHHHHHHHHHHTTCCCSEEEECCS-SHHHHHHHHHHHHHTTCCCSEE
T ss_pred hhccccceeeeeccccccccccccccccchHHhhhHHHHHHhhhccccccceecccc-ccccccchhhhhhhcccccchh
Confidence 35678889999999984 65554221 123334444555554433 344444 5556566666666666778887
Q ss_pred EEcC
Q 025672 94 VNAA 97 (249)
Q Consensus 94 i~~a 97 (249)
+...
T Consensus 182 ~~~~ 185 (271)
T d1jyea_ 182 LVAN 185 (271)
T ss_dssp EESS
T ss_pred hccc
Confidence 7644
|
| >d1h9aa1 c.2.1.3 (A:1-181,A:413-426) Glucose 6-phosphate dehydrogenase, N-terminal domain {Leuconostoc mesenteroides [TaxId: 1245]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glucose 6-phosphate dehydrogenase, N-terminal domain species: Leuconostoc mesenteroides [TaxId: 1245]
Probab=80.27 E-value=4.4 Score=28.74 Aligned_cols=70 Identities=16% Similarity=0.031 Sum_probs=40.2
Q ss_pred EEEEecCCCchhHHHHH----HHHHcC-----CeEEEEeCCcchHHHHHHHHH----hc----------CCCeeEEEccC
Q 025672 14 VALLTGGGSGIGFEISL----QLGKHG-----AAIAIMGRRKTVLRSAVAALH----SL----------GIPAIGLEGDV 70 (249)
Q Consensus 14 ~~lItGa~~giG~~~a~----~l~~~G-----~~v~l~~r~~~~~~~~~~~~~----~~----------~~~~~~~~~Dl 70 (249)
.++|.||||.+.+.-.. +|...| .+|+.++|++-..++..+.+. .. -.++.++..|+
T Consensus 7 ~lVIFGaTGDLa~RKL~PAL~~L~~~g~lp~~~~Iig~aR~~~~~e~f~~~v~~~l~~~~~~~~~~~~~~~~~~y~~~~~ 86 (195)
T d1h9aa1 7 LVTFFGGTGDLAKRKLYPSVFNLYKKGYLQKHFAIVGTARQALNDDEFKQLVRDSIKDFTDDQAQAEAFIEHFSYRAHDV 86 (195)
T ss_dssp EEEEETTTSHHHHHTHHHHHHHHHHTTSSCSSEEEEEEESSCCCHHHHHHHHHHHHGGGCSCHHHHHHHHTTEEEEECCT
T ss_pred EEEEECcccHHHHhHHHHHHHHHHHcCCCCCCCEEEEEECCcCcHHHHHHHHHHHHhhccchHhhHHHHhhccceeeEee
Confidence 34578999998873222 333444 368889997655555443332 11 13456666777
Q ss_pred CCHHHHHHHHHHH
Q 025672 71 RKREDAVRVVEST 83 (249)
Q Consensus 71 ~~~~~~~~~~~~~ 83 (249)
.+.++...+.+.+
T Consensus 87 ~~~~~~~~l~~~l 99 (195)
T d1h9aa1 87 TDAASYAVLKEAI 99 (195)
T ss_dssp TCTTTHHHHHHHH
T ss_pred ccHhhHHHHHHHH
Confidence 6666555544433
|
| >d1trba2 c.3.1.5 (A:119-244) Thioredoxin reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Thioredoxin reductase species: Escherichia coli [TaxId: 562]
Probab=80.03 E-value=1.1 Score=29.48 Aligned_cols=39 Identities=18% Similarity=0.321 Sum_probs=32.3
Q ss_pred CCCCCcEEEEecCCCchhHHHHHHHHHcCCeEEEEeCCcc
Q 025672 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT 47 (249)
Q Consensus 8 ~~l~~k~~lItGa~~giG~~~a~~l~~~G~~v~l~~r~~~ 47 (249)
+.+++|.++|.|+ |.-+..-|..|.+-..+|+++.|+++
T Consensus 23 ~~~~~k~V~VvGg-GdsA~e~A~~L~~~a~~V~li~r~~~ 61 (126)
T d1trba2 23 FFYRNQKVAVIGG-GNTAVEEALYLSNIASEVHLIHRRDG 61 (126)
T ss_dssp GGGTTSEEEEECS-SHHHHHHHHHHTTTSSEEEEECSSSS
T ss_pred HHhCCCEEEEECC-CHHHHHHHHHHhhcCCcEEEEeeccc
Confidence 3468999999998 56777888889888889999998753
|