BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 025674
(249 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P27521|CA4_ARATH Chlorophyll a-b binding protein 4, chloroplastic OS=Arabidopsis
thaliana GN=LHCA4 PE=1 SV=1
Length = 251
Score = 447 bits (1149), Expect = e-125, Method: Compositional matrix adjust.
Identities = 216/251 (86%), Positives = 229/251 (91%), Gaps = 4/251 (1%)
Query: 1 MATVTTQASAAVFRPCASKSRFLTGSSGKLNREVALKPVSSSA---SFKVEAK-GEWLPG 56
MATVTT ASA++FRPC SK RFLTGSSG+LNR+++ + SSA SFKVEAK GEWLPG
Sbjct: 1 MATVTTHASASIFRPCTSKPRFLTGSSGRLNRDLSFTSIGSSAKTSSFKVEAKKGEWLPG 60
Query: 57 LASPTYLNGSLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVVGMLLPEVFTKIG 116
LASP YL GSL GDNGFDPLGLAEDPENLKW+VQAELVN RWAMLGV GMLLPEVFTKIG
Sbjct: 61 LASPDYLTGSLAGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVFTKIG 120
Query: 117 IINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPP 176
IIN P+WYDAGK +YFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLP
Sbjct: 121 IINVPEWYDAGKEQYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPK 180
Query: 177 NEVGYPGGIFNPLNFAPTDEAKEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISD 236
EVGYPGGIFNPLNFAPT EAKEKELANGRLAMLAFLGF+VQHNVTGKGPFENLLQH+SD
Sbjct: 181 GEVGYPGGIFNPLNFAPTQEAKEKELANGRLAMLAFLGFVVQHNVTGKGPFENLLQHLSD 240
Query: 237 PWHNTIVQTLS 247
PWHNTIVQT +
Sbjct: 241 PWHNTIVQTFN 251
>sp|Q9SQL2|CB24_PEA Chlorophyll a-b binding protein P4, chloroplastic OS=Pisum sativum
GN=lhcA-P4 PE=1 SV=1
Length = 252
Score = 447 bits (1149), Expect = e-125, Method: Compositional matrix adjust.
Identities = 221/252 (87%), Positives = 229/252 (90%), Gaps = 3/252 (1%)
Query: 1 MATVTTQASAAVFRPCASKSRFLTGSSGKLNREVALKPV--SSSASFKVEAK-GEWLPGL 57
MATVTTQASAA+F PC KSRFL GSSGKLNR VA +PV S SASFKVEAK GEWLPGL
Sbjct: 1 MATVTTQASAAIFGPCGLKSRFLGGSSGKLNRGVAFRPVGCSPSASFKVEAKKGEWLPGL 60
Query: 58 ASPTYLNGSLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVVGMLLPEVFTKIGI 117
ASP YL GSLPGDNGFDPLGLAEDPENL+W+VQAELVN RWAMLGV GMLLPEVFT IGI
Sbjct: 61 ASPGYLTGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTSIGI 120
Query: 118 INAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPN 177
IN P+WY AGK EYFASSSTLFVIEFIL HYVEIRRWQDIKNPGSVNQDPIFKQYSLP
Sbjct: 121 INVPKWYAAGKEEYFASSSTLFVIEFILSHYVEIRRWQDIKNPGSVNQDPIFKQYSLPAG 180
Query: 178 EVGYPGGIFNPLNFAPTDEAKEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDP 237
EVGYPGGIFNPLNFAPT EAKEKE+ANGRLAMLAFLGFI+QHNVTGKGPF+NLLQHISDP
Sbjct: 181 EVGYPGGIFNPLNFAPTLEAKEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNLLQHISDP 240
Query: 238 WHNTIVQTLSGN 249
WHNTIVQTL GN
Sbjct: 241 WHNTIVQTLGGN 252
>sp|Q36718|CB120_HORVU Chlorophyll a-b binding protein 1B-20, chloroplastic (Fragment)
OS=Hordeum vulgare GN=LHC Ib-20 PE=1 SV=1
Length = 231
Score = 320 bits (820), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 154/213 (72%), Positives = 175/213 (82%), Gaps = 3/213 (1%)
Query: 38 PVSSSASFKVEAKGEWLPGLASPTYLNGSLPGDNGFDPLGLAEDPENLKWYVQAELVNSR 97
P S+ V+AKG WLPGL SP YL+GSL GDNGFDPL LAEDPE+L+W+VQA++VN R
Sbjct: 21 PRSTRRDVAVQAKGSWLPGLQSPAYLDGSLEGDNGFDPLALAEDPEDLRWFVQADVVNGR 80
Query: 98 WAMLGVVGMLLPEVFTKIGIINAPQWYD-AGKAEYFASSSTLFVIEFILFHYVEIRRWQD 156
WAMLGV GML+PEV TK G++NAP+W GK YFASSST + + YVEIRRWQD
Sbjct: 81 WAMLGVAGMLIPEVLTKAGLMNAPEWLRLPGKETYFASSSTALRVH-MSSTYVEIRRWQD 139
Query: 157 IKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTDEAKEKELANGRLAMLAFLGFI 216
IKNPGSVNQDPIFK YSLPP+E GYPG +FNPLNFAP E KEKELANGRLAMLAFLGF+
Sbjct: 140 IKNPGSVNQDPIFKSYSLPPHECGYPGRVFNPLNFAPL-ENKEKELANGRLAMLAFLGFL 198
Query: 217 VQHNVTGKGPFENLLQHISDPWHNTIVQTLSGN 249
VQHNV GKGPFENL QH++DPWHNTI+QT+SG
Sbjct: 199 VQHNVHGKGPFENLQQHLADPWHNTIIQTISGQ 231
>sp|P13869|CB12_PETHY Chlorophyll a-b binding protein, chloroplastic OS=Petunia hybrida
PE=2 SV=1
Length = 270
Score = 235 bits (600), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 121/240 (50%), Positives = 152/240 (63%), Gaps = 9/240 (3%)
Query: 17 ASKSRFLTGSSGKLNREVALKPVSSSASFKVEAKGE---WLPGLASPTYLNGSLPGDNGF 73
A+K+ FL G ++++ +A S A V A + W PG P +L+GSLPGD GF
Sbjct: 29 ATKASFLGGKRLRVSKFIAPVGSRSVAVSAVAADPDRPLWFPGSTPPEWLDGSLPGDFGF 88
Query: 74 DPLGLAEDPENLKWYVQAELVNSRWAMLGVVGMLLPEVFTKIGIINAPQWYDAGKAEYFA 133
DPLGL DPE+LKW QAELV+SRWAMLG G+ +PE TKIG++N P WY AG+ EYF
Sbjct: 89 DPLGLGSDPESLKWNAQAELVHSRWAMLGAAGIFIPEFLTKIGVLNTPSWYTAGEQEYFT 148
Query: 134 SSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGI-FNPLNF- 191
++TLFVIE +L + E RRW DI PG VN DPIF L +VGYPGG+ F+PL +
Sbjct: 149 DTTTLFVIELVLIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWG 208
Query: 192 ----APTDEAKEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTLS 247
A E + KE+ NGRLAMLA +G QH TG GP +NL H++DP H TI S
Sbjct: 209 SGSPAKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATIFAAFS 268
>sp|P10708|CB12_SOLLC Chlorophyll a-b binding protein 7, chloroplastic OS=Solanum
lycopersicum GN=CAB7 PE=3 SV=1
Length = 270
Score = 233 bits (595), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 116/239 (48%), Positives = 151/239 (63%), Gaps = 9/239 (3%)
Query: 18 SKSRFLTGSSGKLNREVALKPVSSSASFKVEAKGE---WLPGLASPTYLNGSLPGDNGFD 74
+K+ FL G ++++ S+ + V A + W PG P +L+GSLPGD GFD
Sbjct: 30 TKASFLGGRRLRVSKYSTTPTARSATTVCVAADPDRPLWFPGSTPPPWLDGSLPGDFGFD 89
Query: 75 PLGLAEDPENLKWYVQAELVNSRWAMLGVVGMLLPEVFTKIGIINAPQWYDAGKAEYFAS 134
PLGLA DPE+L+W QAELV+ RWAMLG G+ +PE+ TKIGI+N P WY AG+ EYF
Sbjct: 90 PLGLASDPESLRWNQQAELVHCRWAMLGAAGIFIPELLTKIGILNTPSWYTAGEQEYFTD 149
Query: 135 SSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGI-FNPLNF-- 191
++TLF++E +L + E RRW DI PG VN DPIF L +VGYPGG+ F+PL +
Sbjct: 150 TTTLFIVELVLIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGS 209
Query: 192 ---APTDEAKEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTLS 247
A E + KE+ NGRLAMLA +G QH TG GP +NL H++DP H TI S
Sbjct: 210 GSPAKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATIFAAFS 268
>sp|Q32904|CB23_PEA Chlorophyll a-b binding protein 3, chloroplastic OS=Pisum sativum
GN=lhca3 PE=1 SV=1
Length = 275
Score = 157 bits (396), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 96/221 (43%), Positives = 125/221 (56%), Gaps = 33/221 (14%)
Query: 53 WLPGLASPTYLNGSLPGDNGFDPLGLAEDPENL------KWYVQAELVNSRWAMLGVVGM 106
W S +YL+GSLPGD GFDPLGL+ DPE +W E++N R+AMLG VG
Sbjct: 58 WFASKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPRWLAYGEVINGRFAMLGAVGA 116
Query: 107 LLPEVFTKIGII---NAPQWYD------AGKAEYFASSSTLFVIEFILFHYVEIRRWQDI 157
+ PE K+G+I A W+ AG Y+A + TLFV+E L + E RR+QD
Sbjct: 117 IAPEYLGKVGLIPQETALAWFQTGVIPPAGTYNYWADNYTLFVLEMALMGFAEHRRFQDW 176
Query: 158 KNPGSVNQDPIFKQYSLP-------PNEVGYPGG-IFNPLNFAPTD----EAKEKELANG 205
PGS+ KQY L YPGG FNPL F + E K KE+ NG
Sbjct: 177 AKPGSMG-----KQYFLGLEKGFGGSGNPAYPGGPFFNPLGFGKDEKSLKELKLKEVKNG 231
Query: 206 RLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTL 246
RLAMLA LG+ +Q VTG GP++NLL H++DP +N ++ +L
Sbjct: 232 RLAMLAILGYFIQGLVTGVGPYQNLLDHVADPVNNNVLTSL 272
>sp|P27522|CB13_SOLLC Chlorophyll a-b binding protein 8, chloroplastic OS=Solanum
lycopersicum GN=CAB8 PE=3 SV=1
Length = 273
Score = 156 bits (395), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 101/254 (39%), Positives = 139/254 (54%), Gaps = 38/254 (14%)
Query: 20 SRFLTGSSGKLNREVALKPVSSSASFKVEAKGEWLPGLASPTYLNGSLPGDNGFDPLGLA 79
S+ +T + + R + PV A+ ++ W S +YL+G LPGD GFDPLGL+
Sbjct: 28 SQSVTRKASFVVRAASTPPVKQGANRQL-----WFASKQSLSYLDGRLPGDFGFDPLGLS 82
Query: 80 EDPENL------KWYVQAELVNSRWAMLGVVGMLLPEVFTKIGII---NAPQWYD----- 125
DPE KW E++N R+AMLG G + PE+ K G+I A W+
Sbjct: 83 -DPEGTGGFIEPKWLAYGEVINGRFAMLGAAGAIAPEILGKAGLIPQETALAWFQTGVIP 141
Query: 126 -AGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLP-------PN 177
AG Y+A + TLFV+E L + E RR+QD PGS+ KQY L
Sbjct: 142 PAGTYNYWADNYTLFVLEMALMGFAEHRRFQDWAKPGSMG-----KQYFLGLEKGLGGSG 196
Query: 178 EVGYPGG-IFNPLNFAPTD----EAKEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQ 232
+ YPGG +FNPL F + E K KE+ NGRLAMLA LG+ +Q VTG GP++NLL
Sbjct: 197 DPAYPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQALVTGVGPYQNLLD 256
Query: 233 HISDPWHNTIVQTL 246
H++DP +N ++ +L
Sbjct: 257 HLADPVNNNVLTSL 270
>sp|Q01667|CAB6_ARATH Chlorophyll a-b binding protein 6, chloroplastic OS=Arabidopsis
thaliana GN=LHCA1 PE=1 SV=1
Length = 241
Score = 154 bits (390), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 87/210 (41%), Positives = 119/210 (56%), Gaps = 30/210 (14%)
Query: 46 KVEAKGEWLPGLASPTYLNGSLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVVG 105
++ W+PG P YL+GS PGD GFDPLGL E P NL+ Y ++EL++ RWAML V G
Sbjct: 41 RIRMAAHWMPGEPRPAYLDGSAPGDFGFDPLGLGEVPANLERYKESELIHCRWAMLAVPG 100
Query: 106 MLLPEVFTKIGIINAPQW--YDAGKAEYFASS------STLFVIEFILFHYVEIRRWQDI 157
+L+PE + A +W G+A Y + T+ IEF+ +VE +R
Sbjct: 101 ILVPEALGYGNWVKAQEWAALPGGQATYLGNPVPWGTLPTILAIEFLAIAFVEHQR---- 156
Query: 158 KNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPT----DEAKEKELANGRLAMLAFL 213
S+ +DP K+ YPGG F+PL ++ +E K KE+ NGRLA+LAF+
Sbjct: 157 ----SMEKDPEKKK---------YPGGAFDPLGYSKDPKKLEELKVKEIKNGRLALLAFV 203
Query: 214 GFIVQHNV-TGKGPFENLLQHISDPWHNTI 242
GF VQ + G GP ENL H++DPWHN I
Sbjct: 204 GFCVQQSAYPGTGPLENLATHLADPWHNNI 233
>sp|Q9SDM1|CB121_HORVU Chlorophyll a-b binding protein 1B-21, chloroplastic OS=Hordeum
vulgare GN=LHC Ib-21 PE=1 SV=1
Length = 245
Score = 151 bits (381), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 88/215 (40%), Positives = 120/215 (55%), Gaps = 30/215 (13%)
Query: 41 SSASFKVEAKGEWLPGLASPTYLNGSLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAM 100
++ S +V EW PG P +L+GS PGD GFDPLGLA PEN + + ++E+ + RWAM
Sbjct: 36 ATTSGRVTMSAEWFPGQPRPAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAM 95
Query: 101 LGVVGMLLPEVFTKIGIINAPQW--YDAGKAEYFASS------STLFVIEFILFHYVEIR 152
L V G+L+PE + A +W G+A Y + T+ IEF+ + E +
Sbjct: 96 LCVPGVLVPEALGLGNWVKAQEWAALPDGQATYLGNPVPWGNLPTILAIEFLAIAFAEQQ 155
Query: 153 RWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNF----APTDEAKEKELANGRLA 208
R ++ +DP K+ YPGG F+PL F A +E K KE+ NGRLA
Sbjct: 156 R--------TMEKDPEKKK---------YPGGAFDPLGFSKDPAKFEELKLKEIKNGRLA 198
Query: 209 MLAFLGFIVQHNV-TGKGPFENLLQHISDPWHNTI 242
MLAF+GF VQ + G GP ENL H++DPWHN I
Sbjct: 199 MLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNI 233
>sp|P12360|CB11_SOLLC Chlorophyll a-b binding protein 6A, chloroplastic OS=Solanum
lycopersicum GN=CAB6A PE=2 SV=1
Length = 246
Score = 147 bits (371), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 91/250 (36%), Positives = 132/250 (52%), Gaps = 33/250 (13%)
Query: 6 TQASAAVFRPCASKSRFLTGSSGKLNREVALKPVSSSASFKVEAKGEWLPGLASPTYLNG 65
T S + C S FL+ + K + + +++ + +W+PG P+YL+G
Sbjct: 5 TLMSCGIPAVCPS---FLSSTKSKFAAAMPVYVGATNFMSRFSMSADWMPGQPRPSYLDG 61
Query: 66 SLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVVGMLLPEVFTKIGIINAPQW-- 123
S PGD GFD LGL E P NL+ Y ++EL++ RWAML V G+++PE + A +W
Sbjct: 62 SAPGDFGFDSLGLGEVPANLERYKESELIHCRWAMLAVPGIIVPEALGLGNWVKAQEWAA 121
Query: 124 YDAGKAEYF------ASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPN 177
G+A Y + T+ IEF+ +VE +R S+ +D K+
Sbjct: 122 IPGGQATYLGQPVPWGTLPTILAIEFLAIAFVEHQR--------SMEKDSEKKK------ 167
Query: 178 EVGYPGGIFNPLNF----APTDEAKEKELANGRLAMLAFLGFIVQHNV-TGKGPFENLLQ 232
YPGG F+PL + A +E K KE+ NGRLA+LA +GF VQ + G GP ENL
Sbjct: 168 ---YPGGAFDPLGYSKDPAKFEELKVKEIKNGRLALLAIVGFCVQQSAYLGTGPLENLAT 224
Query: 233 HISDPWHNTI 242
H++DPWHN I
Sbjct: 225 HLADPWHNNI 234
>sp|P27493|CB22_TOBAC Chlorophyll a-b binding protein 21, chloroplastic OS=Nicotiana
tabacum GN=CAB21 PE=2 SV=1
Length = 265
Score = 122 bits (306), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/266 (34%), Positives = 128/266 (48%), Gaps = 40/266 (15%)
Query: 1 MATVTTQASAAVFRPCASK----SRFLTGSSGKLNREVALKPVSSSASFKVEAKGEWLPG 56
MA T S+ F A K + +TG+ R+ KPV+SS+ + + ++L
Sbjct: 1 MAAATMALSSPSFAGQAVKLSPSAPEITGNGRVSMRKTVAKPVASSSPWYGPDRVKYLGP 60
Query: 57 LA--SPTYLNGSLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVVGMLLPEVFTK 114
+ SP+YL G PGD G+D GL+ DPE + E+++ RWAMLG +G + PE+ +
Sbjct: 61 FSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 120
Query: 115 IGI-INAPQWYDAGKA-------EYFASSS--------TLFVIEFILFHYVEIRRWQDIK 158
G+ W+ AG +Y + S ++ + IL VE R
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG-- 178
Query: 159 NPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTDEA----KEKELANGRLAMLAFLG 214
P DP+ YPGG F+PL A EA K KE+ NGRLAM + G
Sbjct: 179 GPLGEVVDPL------------YPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFG 226
Query: 215 FIVQHNVTGKGPFENLLQHISDPWHN 240
F VQ VTGKGP ENL H++DP +N
Sbjct: 227 FFVQAIVTGKGPLENLADHLADPVNN 252
>sp|P12330|CB21_ORYSJ Chlorophyll a-b binding protein 1, chloroplastic OS=Oryza sativa
subsp. japonica GN=CAB1R PE=2 SV=2
Length = 265
Score = 122 bits (306), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/266 (34%), Positives = 127/266 (47%), Gaps = 40/266 (15%)
Query: 1 MATVTTQASAAVF-RPCASKSRFLTGSSGKLNREVALKP---VSSSASFKVEAKGEWLPG 56
MA T S+ V R S S L G + R+ A KP SS + + + +L
Sbjct: 1 MAAATMALSSPVMARAAPSTSSALFGEARITMRKTAAKPKPAASSGSPWYGADRVLYLGP 60
Query: 57 LAS--PTYLNGSLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVVGMLLPEVFTK 114
L+ P+YL G PGD G+D GL+ DPE + E+++SRWAMLG +G + PE+ +
Sbjct: 61 LSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLAR 120
Query: 115 IGI-INAPQWYDAGKA-------EYFASSS--------TLFVIEFILFHYVEIRRWQDIK 158
G+ W+ AG +Y + S ++ ++ +L VE R
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWAVQVVLMGAVEGYRIAG-- 178
Query: 159 NPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTDEA----KEKELANGRLAMLAFLG 214
P DP+ YPGG F+PL A EA K KE+ NGRLAM + G
Sbjct: 179 GPLGEVVDPL------------YPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFG 226
Query: 215 FIVQHNVTGKGPFENLLQHISDPWHN 240
F VQ VTGKGP ENL H++DP +N
Sbjct: 227 FFVQAIVTGKGPLENLADHLADPVNN 252
>sp|P07369|CB2G_SOLLC Chlorophyll a-b binding protein 3C, chloroplastic OS=Solanum
lycopersicum GN=CAB3C PE=3 SV=1
Length = 267
Score = 122 bits (305), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 93/258 (36%), Positives = 132/258 (51%), Gaps = 22/258 (8%)
Query: 1 MATVTTQASAAVFRPCASK----SRFLTGSSGKLNREVALK--PVSSSASFKVEAKGEWL 54
MAT T S++ F A K S +TG+ R+ A K P SS + + + ++L
Sbjct: 1 MATSTMALSSSTFAGKAVKLSPSSSEITGNGRVTMRKTATKAKPASSGSPWYGPDRVKYL 60
Query: 55 PGLA--SPTYLNGSLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVVGMLLPEVF 112
+ SP+YL G PGD G+D GL+ DPE + E+++ RWAMLG +G + PE+
Sbjct: 61 GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120
Query: 113 TKIGI-INAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRR-WQ-DIKNPGSVNQDPIF 169
+ G+ W+ AG ++ F+ ++ L H I W + G+V +
Sbjct: 121 ARNGVKFGEAVWFKAG-SQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEG---Y 176
Query: 170 KQYSLPPNEVG---YPGGIFNPLNFAPTDEA----KEKELANGRLAMLAFLGFIVQHNVT 222
+ P EV YPGG F+PL A EA K KE+ NGRLAM + GF VQ VT
Sbjct: 177 RIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVT 236
Query: 223 GKGPFENLLQHISDPWHN 240
GKGP ENL H++DP +N
Sbjct: 237 GKGPLENLADHLADPVNN 254
>sp|P12469|CB23_NICPL Chlorophyll a-b binding protein C, chloroplastic OS=Nicotiana
plumbaginifolia GN=CABC PE=3 SV=1
Length = 267
Score = 122 bits (305), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 92/257 (35%), Positives = 131/257 (50%), Gaps = 20/257 (7%)
Query: 1 MATVTTQASAAVFRPCASK----SRFLTGSSGKLNREVA--LKPVSSSASFKVEAKGEWL 54
MA T S++ F A K S +TG+ R+ A KPVSSS+ + + ++L
Sbjct: 1 MAASTMALSSSSFAGKAVKLSPSSSEITGNGKVTMRKTASKAKPVSSSSPWYGPNRVKYL 60
Query: 55 PGLA--SPTYLNGSLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVVGMLLPEVF 112
+ SP+YL G PGD G+D GL+ DPE + E+++ RWAMLG +G + PE+
Sbjct: 61 GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120
Query: 113 TKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRR-WQ-DIKNPGSVNQDPIFK 170
+ G+ + G ++ F+ ++ L H I W + G+V ++
Sbjct: 121 ARNGVKFGEAVWFKGGSQIFSQGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEG---YR 177
Query: 171 QYSLPPNEVG---YPGGIFNPLNFAPTDEA----KEKELANGRLAMLAFLGFIVQHNVTG 223
P EV YPGG F+PL A EA K KE+ NGRLAM + GF VQ VTG
Sbjct: 178 VAGEPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 237
Query: 224 KGPFENLLQHISDPWHN 240
KGP ENL H++DP +N
Sbjct: 238 KGPLENLADHLADPVNN 254
>sp|P27490|CB28_PEA Chlorophyll a-b binding protein 8, chloroplastic OS=Pisum sativum
GN=CAB8 PE=1 SV=1
Length = 268
Score = 121 bits (304), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 78/202 (38%), Positives = 102/202 (50%), Gaps = 34/202 (16%)
Query: 59 SPTYLNGSLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVVGMLLPEVFTKIGI- 117
SP+YL G PGD G+D GL+ DPE + E+++SRWAMLG +G + PE+ ++ G+
Sbjct: 68 SPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLSRNGVK 127
Query: 118 INAPQWYDAGKA-------EYFASSS--------TLFVIEFILFHYVEIRRWQDIKNPGS 162
W+ AG +Y + S ++ + IL VE R P
Sbjct: 128 FGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAG--GPLG 185
Query: 163 VNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTDEA----KEKELANGRLAMLAFLGFIVQ 218
DP+ YPGG F+PL A EA K KEL NGRLAM + GF VQ
Sbjct: 186 EVVDPL------------YPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQ 233
Query: 219 HNVTGKGPFENLLQHISDPWHN 240
VTGKGP ENL H+SDP +N
Sbjct: 234 AIVTGKGPLENLADHLSDPVNN 255
>sp|P04781|CB23_PETSP Chlorophyll a-b binding protein 22R, chloroplastic OS=Petunia sp.
GN=CAB22R PE=3 SV=1
Length = 267
Score = 121 bits (303), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 94/261 (36%), Positives = 135/261 (51%), Gaps = 28/261 (10%)
Query: 1 MATVTTQASAAVFRPCASKSRFLTGSSGKL--NREVAL-------KPVSSSASFKVEAKG 51
MA T S++ F A K+ L+ SS ++ N +V + KP SSS+ + +
Sbjct: 1 MAATTMALSSSSF---AGKAVKLSSSSSEITGNGKVTMRKTVTKAKPASSSSPWYGPDRV 57
Query: 52 EWLPGLA--SPTYLNGSLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVVGMLLP 109
++L + +P+YL G P D G+D GL+ DPE + E+++ RWAMLG +G + P
Sbjct: 58 KYLGPFSGEAPSYLTGEFPSDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFP 117
Query: 110 EVFTKIGI-INAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRR-WQ-DIKNPGSVNQD 166
E+F + GI W+ AG A+ F+ ++ L H I W + G+V
Sbjct: 118 ELFARNGIKFGEAVWFKAG-AQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEG- 175
Query: 167 PIFKQYSLPPNEVG---YPGGIFNPLNFAPTDEA----KEKELANGRLAMLAFLGFIVQH 219
++ P EV YPGG F+PL A EA K KE+ NGRLAM + GF VQ
Sbjct: 176 --YRVAGGPLGEVIDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQA 233
Query: 220 NVTGKGPFENLLQHISDPWHN 240
VTGKGP ENL H++DP +N
Sbjct: 234 IVTGKGPLENLADHLADPVNN 254
>sp|P04780|CB22_PETSP Chlorophyll a-b binding protein 22L, chloroplastic OS=Petunia sp.
GN=CAB22L PE=3 SV=1
Length = 267
Score = 120 bits (302), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 90/268 (33%), Positives = 127/268 (47%), Gaps = 42/268 (15%)
Query: 1 MATVTTQASAAVFRPCASK----SRFLTGSSGKLNREVALK--PVSSSASFKVEAKGEWL 54
MA T S++ F K S +TG+ R+ A K PVSS + + + ++L
Sbjct: 1 MAAATMALSSSTFAGKVVKLSPSSSEITGNGKATMRKTATKAKPVSSGSPWYGPDRVKYL 60
Query: 55 PGLA--SPTYLNGSLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVVGMLLPEVF 112
+ +P+YL G PGD G+D GL+ DPE + E+++ RWAMLG +G + PE+F
Sbjct: 61 GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELF 120
Query: 113 TKIGI--------INAPQWYDAGKAEYFASSS--------TLFVIEFILFHYVEIRRWQD 156
+ G+ Q + G +Y + S ++ + +L VE R
Sbjct: 121 ARNGVKFGEAVWLKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVLLMGAVEGYRVAG 180
Query: 157 IKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTDEA----KEKELANGRLAMLAF 212
P V DP+ YPGG F+PL A EA K KE NGRLAM +
Sbjct: 181 --GPLGVVVDPL------------YPGGSFDPLGLAEDPEAFAELKVKETKNGRLAMFSM 226
Query: 213 LGFIVQHNVTGKGPFENLLQHISDPWHN 240
GF +Q VTGKGP ENL H+ DP +N
Sbjct: 227 FGFFIQAIVTGKGPLENLADHLVDPVNN 254
>sp|P04778|CB1C_ARATH Chlorophyll a-b binding protein 1, chloroplastic OS=Arabidopsis
thaliana GN=LHCB1.3 PE=1 SV=1
Length = 267
Score = 120 bits (302), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 71/194 (36%), Positives = 99/194 (51%), Gaps = 17/194 (8%)
Query: 59 SPTYLNGSLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVVGMLLPEVFTKIGI- 117
SP+YL G PGD G+D GL+ DPE + E+++SRWAMLG +G + PE+ + G+
Sbjct: 66 SPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLARNGVK 125
Query: 118 INAPQWYDAGKA-------EYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFK 170
W+ AG +Y + S + + ++ ++ P+ +
Sbjct: 126 FGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGNGPLGE 185
Query: 171 QYSLPPNEVGYPGGIFNPLNFAPTDEA----KEKELANGRLAMLAFLGFIVQHNVTGKGP 226
L YPGG F+PL A EA K KEL NGRLAM + GF VQ VTGKGP
Sbjct: 186 AEDLL-----YPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 240
Query: 227 FENLLQHISDPWHN 240
ENL H++DP +N
Sbjct: 241 IENLADHLADPVNN 254
>sp|Q8VZ87|CB1B_ARATH Chlorophyll a-b binding protein 3, chloroplastic OS=Arabidopsis
thaliana GN=LHCB1.2 PE=1 SV=2
Length = 267
Score = 120 bits (302), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 71/194 (36%), Positives = 99/194 (51%), Gaps = 17/194 (8%)
Query: 59 SPTYLNGSLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVVGMLLPEVFTKIGI- 117
SP+YL G PGD G+D GL+ DPE + E+++SRWAMLG +G + PE+ + G+
Sbjct: 66 SPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLARNGVK 125
Query: 118 INAPQWYDAGKA-------EYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFK 170
W+ AG +Y + S + + ++ ++ P+ +
Sbjct: 126 FGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGNGPLGE 185
Query: 171 QYSLPPNEVGYPGGIFNPLNFAPTDEA----KEKELANGRLAMLAFLGFIVQHNVTGKGP 226
L YPGG F+PL A EA K KEL NGRLAM + GF VQ VTGKGP
Sbjct: 186 AEDLL-----YPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 240
Query: 227 FENLLQHISDPWHN 240
ENL H++DP +N
Sbjct: 241 IENLADHLADPVNN 254
>sp|P0CJ48|CB1A_ARATH Chlorophyll a-b binding protein 2, chloroplastic OS=Arabidopsis
thaliana GN=LHCB1.1 PE=1 SV=1
Length = 267
Score = 120 bits (302), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 71/194 (36%), Positives = 99/194 (51%), Gaps = 17/194 (8%)
Query: 59 SPTYLNGSLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVVGMLLPEVFTKIGI- 117
SP+YL G PGD G+D GL+ DPE + E+++SRWAMLG +G + PE+ + G+
Sbjct: 66 SPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLARNGVK 125
Query: 118 INAPQWYDAGKA-------EYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFK 170
W+ AG +Y + S + + ++ ++ P+ +
Sbjct: 126 FGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGNGPLGE 185
Query: 171 QYSLPPNEVGYPGGIFNPLNFAPTDEA----KEKELANGRLAMLAFLGFIVQHNVTGKGP 226
L YPGG F+PL A EA K KEL NGRLAM + GF VQ VTGKGP
Sbjct: 186 AEDLL-----YPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 240
Query: 227 FENLLQHISDPWHN 240
ENL H++DP +N
Sbjct: 241 IENLADHLADPVNN 254
>sp|P04782|CB24_PETSP Chlorophyll a-b binding protein 25, chloroplastic OS=Petunia sp.
GN=CAB25 PE=3 SV=1
Length = 266
Score = 120 bits (301), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 91/257 (35%), Positives = 131/257 (50%), Gaps = 21/257 (8%)
Query: 1 MATVTTQASAAVFRPCA---SKSRFLTGSSGKLNREVALK--PVSSSASFKVEAKGEWLP 55
MA T S++ F A S +TG+ R+ K PVSS + + + ++L
Sbjct: 1 MAAATMAISSSSFAGKAVNVPSSSQITGNGKATMRKTVTKAKPVSSGSPWYGPDRVKYLG 60
Query: 56 GLA--SPTYLNGSLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVVGMLLPEVFT 113
+ +P+YL G PGD G+D GL+ DPE + E+++ RWAMLG +G + PE+F
Sbjct: 61 PFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFA 120
Query: 114 KIGI-INAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRR-WQ-DIKNPGSVNQDPIFK 170
+ G+ W+ AG ++ F+ ++ L H I W + G+V ++
Sbjct: 121 RNGVKFGEAVWFKAG-SQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEG---YR 176
Query: 171 QYSLPPNEVG---YPGGIFNPLNFAPTDEA----KEKELANGRLAMLAFLGFIVQHNVTG 223
P EV YPGG F+PL A EA K KE+ NGRLAM + GF VQ VTG
Sbjct: 177 VAGGPLGEVIDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 236
Query: 224 KGPFENLLQHISDPWHN 240
KGP ENL H++DP +N
Sbjct: 237 KGPLENLADHLADPVNN 253
>sp|P08221|CB21_CUCSA Chlorophyll a-b binding protein of LHCII type I, chloroplastic
(Fragment) OS=Cucumis sativus PE=2 SV=1
Length = 255
Score = 120 bits (301), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 83/231 (35%), Positives = 115/231 (49%), Gaps = 36/231 (15%)
Query: 32 REVALKPVSSSASFKVEAKGEWLPGLAS--PTYLNGSLPGDNGFDPLGLAEDPENLKWYV 89
R+ A K VSS + + + ++L + P+YL G PGD G+D GL+ DPE
Sbjct: 26 RKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNR 85
Query: 90 QAELVNSRWAMLGVVGMLLPEVFTKIGI-INAPQWYDAGKA-------EYFASSS----- 136
+ E+++SRWAMLG +G + PE+ ++ G+ W+ AG +Y + S
Sbjct: 86 ELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQ 145
Query: 137 ---TLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAP 193
++ + +L VE R P DPI YPGG F+PL A
Sbjct: 146 SILAIWACQVVLMGAVEGYRIAG--GPLGEVTDPI------------YPGGSFDPLGLAD 191
Query: 194 TDEA----KEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHN 240
EA K KEL NGRLAM + GF VQ VTGKGP ENL H++DP +N
Sbjct: 192 DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNN 242
>sp|P27492|CB21_TOBAC Chlorophyll a-b binding protein 16, chloroplastic OS=Nicotiana
tabacum GN=CAB16 PE=2 SV=1
Length = 266
Score = 120 bits (301), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 94/261 (36%), Positives = 135/261 (51%), Gaps = 29/261 (11%)
Query: 1 MATVTTQASAAVFRPCASKSRFLTGSSGKL--NREVAL-------KPVSSSASFKVEAKG 51
MA TT S+ P A K+ L+ SS ++ N +V + KPVSS + + +
Sbjct: 1 MAASTTALSS----PFAGKAVKLSPSSSEVTGNGKVTMRKTASKAKPVSSGSPWYGPDRV 56
Query: 52 EWLPGLA--SPTYLNGSLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVVGMLLP 109
++L + SP+YL G PGD G+D GL+ DPE + E+++ RWAMLG +G + P
Sbjct: 57 KYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFP 116
Query: 110 EVFTKIGI-INAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRR-WQ-DIKNPGSVNQD 166
E+ + G+ W+ AG ++ F+ ++ L H I W + G+V
Sbjct: 117 ELLARNGVKFGEAVWFKAG-SQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEG- 174
Query: 167 PIFKQYSLPPNEVG---YPGGIFNPLNFAPTDEA----KEKELANGRLAMLAFLGFIVQH 219
++ P EV YPGG F+PL A EA K KE+ NGRLAM + GF VQ
Sbjct: 175 --YRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQA 232
Query: 220 NVTGKGPFENLLQHISDPWHN 240
VTGKGP ENL H++DP +N
Sbjct: 233 IVTGKGPLENLADHLADPVNN 253
>sp|P12470|CB25_NICPL Chlorophyll a-b binding protein E, chloroplastic OS=Nicotiana
plumbaginifolia GN=CABE PE=3 SV=1
Length = 266
Score = 120 bits (300), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 94/261 (36%), Positives = 135/261 (51%), Gaps = 29/261 (11%)
Query: 1 MATVTTQASAAVFRPCASKSRFLTGSSGKL--NREVAL-------KPVSSSASFKVEAKG 51
MA TT S+ P A K+ L+ SS ++ N +V + KPVSS + + +
Sbjct: 1 MAASTTALSS----PFAGKAVKLSPSSSEVTGNGKVTMRKTANKAKPVSSGSPWYGPDRV 56
Query: 52 EWLPGLA--SPTYLNGSLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVVGMLLP 109
++L + SP+YL G PGD G+D GL+ DPE + E+++ RWAMLG +G + P
Sbjct: 57 KYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFP 116
Query: 110 EVFTKIGI-INAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRR-WQ-DIKNPGSVNQD 166
E+ + G+ W+ AG ++ F+ ++ L H I W + G+V
Sbjct: 117 ELLARNGVKFGEAVWFKAG-SQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEG- 174
Query: 167 PIFKQYSLPPNEVG---YPGGIFNPLNFAPTDEA----KEKELANGRLAMLAFLGFIVQH 219
++ P EV YPGG F+PL A EA K KE+ NGRLAM + GF VQ
Sbjct: 175 --YRVAGEPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQA 232
Query: 220 NVTGKGPFENLLQHISDPWHN 240
VTGKGP ENL H++DP +N
Sbjct: 233 LVTGKGPLENLADHLADPVNN 253
>sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 member F3, chloroplastic
OS=Polystichum munitum GN=CABF3 PE=3 SV=1
Length = 265
Score = 120 bits (300), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/201 (38%), Positives = 101/201 (50%), Gaps = 34/201 (16%)
Query: 60 PTYLNGSLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVVGMLLPEVFTKIGI-I 118
P+YL+G PGD G+D GL+ DPE + E+++SRWAMLG +G + PE+ K G+
Sbjct: 66 PSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKF 125
Query: 119 NAPQWYDAGKA-------EYFASSS--------TLFVIEFILFHYVEIRRWQDIKNPGSV 163
W+ AG +Y + S ++ + IL VE R P
Sbjct: 126 GEAVWFKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG--GPLGE 183
Query: 164 NQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTDEA----KEKELANGRLAMLAFLGFIVQH 219
+DPI YPGG F+PL A EA K KEL NGRLAM + GF VQ
Sbjct: 184 VEDPI------------YPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQA 231
Query: 220 NVTGKGPFENLLQHISDPWHN 240
VTGKGP ENL H++DP N
Sbjct: 232 IVTGKGPIENLSDHLADPAVN 252
>sp|P07371|CB22_PEA Chlorophyll a-b binding protein AB80, chloroplastic OS=Pisum
sativum GN=AB80 PE=1 SV=1
Length = 269
Score = 119 bits (299), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/202 (38%), Positives = 102/202 (50%), Gaps = 34/202 (16%)
Query: 59 SPTYLNGSLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVVGMLLPEVFTKIGI- 117
SP+YL G PGD G+D GL+ DPE + E+++SRWAMLG +G + PE+ ++ G+
Sbjct: 69 SPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLSRNGVK 128
Query: 118 INAPQWYDAGKA-------EYFASSS--------TLFVIEFILFHYVEIRRWQDIKNPGS 162
W+ AG +Y + S ++ + IL VE R P
Sbjct: 129 FGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAG--GPLG 186
Query: 163 VNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTDEA----KEKELANGRLAMLAFLGFIVQ 218
DP+ YPGG F+PL A EA K KEL NGRLAM + GF VQ
Sbjct: 187 EVVDPL------------YPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQ 234
Query: 219 HNVTGKGPFENLLQHISDPWHN 240
VTGKGP ENL H++DP +N
Sbjct: 235 AIVTGKGPLENLADHLADPVNN 256
>sp|P15194|CB2B_PINSY Chlorophyll a-b binding protein type 2 member 1B, chloroplastic
OS=Pinus sylvestris PE=2 SV=1
Length = 274
Score = 119 bits (299), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/201 (37%), Positives = 100/201 (49%), Gaps = 34/201 (16%)
Query: 60 PTYLNGSLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVVGMLLPEVFTKIGI-I 118
P+YL G PGD G+D GL+ DPEN + E+++ RWAMLG +G + PE+ + G+
Sbjct: 75 PSYLTGEFPGDYGWDTAGLSADPENFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKF 134
Query: 119 NAPQWYDAGKA-------EYFASSS--------TLFVIEFILFHYVEIRRWQDIKNPGSV 163
W+ AG +Y + S ++ + IL VE R P
Sbjct: 135 GEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAG--GPLGE 192
Query: 164 NQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTDEA----KEKELANGRLAMLAFLGFIVQH 219
DPI YPGG F+PL A EA K KE+ NGRLAM + GF VQ
Sbjct: 193 VTDPI------------YPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQA 240
Query: 220 NVTGKGPFENLLQHISDPWHN 240
VTGKGP ENL H++DP +N
Sbjct: 241 IVTGKGPIENLADHLADPVNN 261
>sp|P12328|CB21_LEMGI Chlorophyll a-b binding protein of LHCII type I, chloroplastic
OS=Lemna gibba PE=3 SV=1
Length = 264
Score = 119 bits (299), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/194 (39%), Positives = 102/194 (52%), Gaps = 18/194 (9%)
Query: 59 SPTYLNGSLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVVGMLLPEVFTKIGI- 117
+P+YL G PGD G+D GL+ DPE + E+++SRWAMLG +G + PE+ +K G+
Sbjct: 64 TPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCIFPELLSKNGVQ 123
Query: 118 INAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRR-WQDIKNPGSVNQDPIFKQYSLPP 176
W+ AG A+ F+ ++ L H I W V + + Y +
Sbjct: 124 FGEAVWFKAG-AQIFSEGGLDYLGNPNLVHAQSILAIWAT-----QVVLMGLIEGYRVGG 177
Query: 177 NEVG------YPGGIFNPLNFAPTDEA----KEKELANGRLAMLAFLGFIVQHNVTGKGP 226
+G YPGG F+PL A EA K KE+ NGRLAM + GF VQ VTGKGP
Sbjct: 178 GPLGEGLDPLYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 237
Query: 227 FENLLQHISDPWHN 240
ENL HI+DP N
Sbjct: 238 IENLADHIADPVAN 251
>sp|P12329|CB21_MAIZE Chlorophyll a-b binding protein 1, chloroplastic OS=Zea mays
GN=CAB1 PE=3 SV=1
Length = 262
Score = 119 bits (298), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/191 (40%), Positives = 104/191 (54%), Gaps = 14/191 (7%)
Query: 60 PTYLNGSLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVVGMLLPEVFTKIGI-I 118
P+YL G PGD G+D GL+ DPE + E+++SRWAMLG +G + PE+ ++ G+
Sbjct: 63 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKF 122
Query: 119 NAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRR-WQ-DIKNPGSVNQDPIFKQYSLPP 176
W+ AG ++ F+ ++ L H I W + G+V ++ P
Sbjct: 123 GEAVWFKAG-SQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEG---YRIAGGPL 178
Query: 177 NEVG---YPGGIFNPLNFAPTDEA----KEKELANGRLAMLAFLGFIVQHNVTGKGPFEN 229
EV YPGG F+PL A EA K KEL NGRLAM + GF VQ VTGKGP EN
Sbjct: 179 GEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLEN 238
Query: 230 LLQHISDPWHN 240
L HI+DP +N
Sbjct: 239 LADHIADPVNN 249
>sp|Q10HD0|CB23_ORYSJ Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa
subsp. japonica GN=RCABP89 PE=2 SV=1
Length = 263
Score = 119 bits (298), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/203 (36%), Positives = 105/203 (51%), Gaps = 36/203 (17%)
Query: 59 SPTYLNGSLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVVGMLLPEVFTKIGI- 117
+P+YL G PGD G+D GL+ DPE + E+++SRWAMLG +G + PE+ +K G+
Sbjct: 63 TPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEILSKNGVK 122
Query: 118 INAPQWYDAGKAEYFASSS----------------TLFVIEFILFHYVEIRRWQDIKNPG 161
W+ AG A+ F+ ++ ++ +L +VE R
Sbjct: 123 FGEAVWFKAG-AQIFSEGGLDYLGNPNLVHAQSILAIWAVQVVLMGFVEGYR-------- 173
Query: 162 SVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPT----DEAKEKELANGRLAMLAFLGFIV 217
V P+ + ++V YPGG F+PL A E K KEL NGRLAM + GF V
Sbjct: 174 -VGGGPLGEGL----DKV-YPGGAFDPLGLADDPDTFAELKVKELKNGRLAMFSMFGFFV 227
Query: 218 QHNVTGKGPFENLLQHISDPWHN 240
Q VTGKGP ENL H++DP N
Sbjct: 228 QAIVTGKGPIENLFDHVADPVAN 250
>sp|A2XJ35|CB23_ORYSI Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa
subsp. indica GN=OsI_012078 PE=2 SV=1
Length = 263
Score = 119 bits (298), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/203 (36%), Positives = 105/203 (51%), Gaps = 36/203 (17%)
Query: 59 SPTYLNGSLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVVGMLLPEVFTKIGI- 117
+P+YL G PGD G+D GL+ DPE + E+++SRWAMLG +G + PE+ +K G+
Sbjct: 63 TPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEILSKNGVK 122
Query: 118 INAPQWYDAGKAEYFASSS----------------TLFVIEFILFHYVEIRRWQDIKNPG 161
W+ AG A+ F+ ++ ++ +L +VE R
Sbjct: 123 FGEAVWFKAG-AQIFSEGGLDYLGNPNLVHAQSILAIWAVQVVLMGFVEGYR-------- 173
Query: 162 SVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPT----DEAKEKELANGRLAMLAFLGFIV 217
V P+ + ++V YPGG F+PL A E K KEL NGRLAM + GF V
Sbjct: 174 -VGGGPLGEGL----DKV-YPGGAFDPLGLADDPDTFAELKVKELKNGRLAMFSMFGFFV 227
Query: 218 QHNVTGKGPFENLLQHISDPWHN 240
Q VTGKGP ENL H++DP N
Sbjct: 228 QAIVTGKGPIENLFDHVADPVAN 250
>sp|P12331|CB22_ORYSJ Chlorophyll a-b binding protein 2, chloroplastic OS=Oryza sativa
subsp. japonica GN=CAB2R PE=2 SV=2
Length = 261
Score = 119 bits (297), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/257 (33%), Positives = 120/257 (46%), Gaps = 55/257 (21%)
Query: 4 VTTQASAAVFRPCASKSRFLTGSSGKLNREVALKPVSSSASFKVEAKGEWLPGLASPTYL 63
+T + SAA +P AS S + +R + L P+S P+YL
Sbjct: 27 ITMRKSAAKPKPAASGSPWYGA-----DRVLYLGPLSGE----------------PPSYL 65
Query: 64 NGSLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVVGMLLPEVFTKIGI-INAPQ 122
G PGD G+D GL+ DPE + E+++SRWAMLG +G + PE+ + G+
Sbjct: 66 TGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAV 125
Query: 123 WYDAGKA-------EYFASSS--------TLFVIEFILFHYVEIRRWQDIKNPGSVNQDP 167
W+ AG +Y + S ++ ++ +L VE R P DP
Sbjct: 126 WFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWAVQVVLMGAVEGYRIAG--GPLGEVVDP 183
Query: 168 IFKQYSLPPNEVGYPGGIFNPLNFAPTDEA----KEKELANGRLAMLAFLGFIVQHNVTG 223
+ YPGG F+PL A EA K KE+ NGRLAM + GF VQ VTG
Sbjct: 184 L------------YPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 231
Query: 224 KGPFENLLQHISDPWHN 240
KGP ENL H++DP +N
Sbjct: 232 KGPLENLADHLADPVNN 248
>sp|P12471|CB21_SOYBN Chlorophyll a-b binding protein, chloroplastic (Fragment)
OS=Glycine max PE=2 SV=1
Length = 245
Score = 118 bits (296), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 82/231 (35%), Positives = 114/231 (49%), Gaps = 36/231 (15%)
Query: 32 REVALKPVSSSASFKVEAKGEWLPGLAS--PTYLNGSLPGDNGFDPLGLAEDPENLKWYV 89
R+ A K VSS + + + ++L + P+YL G PGD G+D GL+ DPE
Sbjct: 16 RKTASKTVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNR 75
Query: 90 QAELVNSRWAMLGVVGMLLPEVFTKIGI-INAPQWYDAGKA-------EYFASSS----- 136
+ E+++SRWAMLG +G + PE+ + G+ W+ AG +Y + S
Sbjct: 76 ELEVIHSRWAMLGALGCVFPELLARNGVKFGEASWFKAGSQIFSEGGLDYLGNQSLIHAQ 135
Query: 137 ---TLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAP 193
++ + IL VE R P DPI YPGG F+PL A
Sbjct: 136 SILAIWATQVILMGAVEGYRIAG--GPLGEVTDPI------------YPGGSFDPLALAD 181
Query: 194 TDEA----KEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHN 240
EA K KE+ NGRLAM + GF VQ VTGKGP ENL H+++P +N
Sbjct: 182 DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLAEPVNN 232
>sp|Q9XF89|CB5_ARATH Chlorophyll a-b binding protein CP26, chloroplastic OS=Arabidopsis
thaliana GN=LHCB5 PE=2 SV=1
Length = 280
Score = 118 bits (296), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 74/200 (37%), Positives = 106/200 (53%), Gaps = 20/200 (10%)
Query: 60 PTYLNGSLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVVGMLLPEVFTKIGIIN 119
P YLNG + GD G+DP GL + PEN Y EL+++RWAMLG G ++PE K G
Sbjct: 82 PEYLNGEVAGDYGYDPFGLGKKPENFAKYQAFELIHARWAMLGAAGFIIPEALNKYGANC 141
Query: 120 APQ--WYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPN 177
P+ W+ G A ++ + + I + V + + G+ +Y N
Sbjct: 142 GPEAVWFKTG-ALLLDGNTLNYFGKNIPINLVLAVVAEVVLLGGA--------EYYRITN 192
Query: 178 EVGY-----PGGIFNPLNFAPTDEA----KEKELANGRLAMLAFLGFIVQHNVTGKGPFE 228
+ + PGG F+PL A E K KE+ NGRLAM A LGF +Q VTG+GP E
Sbjct: 193 GLDFEDKLHPGGPFDPLGLAKDPEQGALLKVKEIKNGRLAMFAMLGFFIQAYVTGEGPVE 252
Query: 229 NLLQHISDPWHNTIVQTLSG 248
NL +H+SDP+ N ++ ++G
Sbjct: 253 NLAKHLSDPFGNNLLTVIAG 272
>sp|P27494|CB23_TOBAC Chlorophyll a-b binding protein 36, chloroplastic OS=Nicotiana
tabacum GN=CAB36 PE=3 SV=1
Length = 265
Score = 118 bits (296), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 73/194 (37%), Positives = 101/194 (52%), Gaps = 18/194 (9%)
Query: 59 SPTYLNGSLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVVGMLLPEVFTKIGI- 117
+P+YL G PGD G+D GL+ DPE + E+++ RWAMLG +G + PE+ +K G+
Sbjct: 65 TPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVK 124
Query: 118 INAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRR-WQDIKNPGSVNQDPIFKQYSLPP 176
W+ AG ++ F+ ++ L H I W V + + Y +
Sbjct: 125 FGEAVWFKAG-SQIFSEGGLDYLGNPNLIHAQSILAVWAS-----QVVLMGLIEGYRVGG 178
Query: 177 NEVG------YPGGIFNPLNFAPTDEA----KEKELANGRLAMLAFLGFIVQHNVTGKGP 226
+G YPGG F+PL A EA K KE+ NGRLAM + GF VQ VTGKGP
Sbjct: 179 GPLGEGLDKIYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 238
Query: 227 FENLLQHISDPWHN 240
ENL H++DP N
Sbjct: 239 IENLFDHVADPVAN 252
>sp|P27497|CB29_MAIZE Chlorophyll a-b binding protein M9, chloroplastic OS=Zea mays
GN=CAB-M9 PE=2 SV=1
Length = 265
Score = 118 bits (295), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 75/191 (39%), Positives = 103/191 (53%), Gaps = 14/191 (7%)
Query: 60 PTYLNGSLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVVGMLLPEVFTKIGI-I 118
P+YL G PGD G+D GL+ DPE + E+++SRWAMLG +G + PE+ + G+
Sbjct: 66 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKF 125
Query: 119 NAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRR-WQ-DIKNPGSVNQDPIFKQYSLPP 176
W+ AG ++ F+ ++ L H I W + G++ ++ P
Sbjct: 126 GEAVWFKAG-SQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAIEG---YRVAGGPL 181
Query: 177 NEVG---YPGGIFNPLNFAPTDEA----KEKELANGRLAMLAFLGFIVQHNVTGKGPFEN 229
EV YPGG F+PL A EA K KEL NGRLAM + GF VQ VTGKGP EN
Sbjct: 182 GEVVDPLYPGGTFDPLGLADDPEAFADVKVKELKNGRLAMFSMFGFFVQAIVTGKGPLEN 241
Query: 230 LLQHISDPWHN 240
L H++DP +N
Sbjct: 242 LADHLADPVNN 252
>sp|P27518|CB21_GOSHI Chlorophyll a-b binding protein 151, chloroplastic OS=Gossypium
hirsutum GN=CAB-151 PE=2 SV=2
Length = 265
Score = 118 bits (295), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 74/201 (36%), Positives = 99/201 (49%), Gaps = 34/201 (16%)
Query: 60 PTYLNGSLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVVGMLLPEVFTKIGI-I 118
P+YL G PGD G+D GL+ DPE + E+++ RWAMLG +G + PE+ +K G+
Sbjct: 66 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEILSKNGVKF 125
Query: 119 NAPQWYDAGKA-------EYFA--------SSSTLFVIEFILFHYVEIRRWQDIKNPGSV 163
W+ AG +Y S ++ + +L +VE R P
Sbjct: 126 GEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGG--GPLGE 183
Query: 164 NQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTDEA----KEKELANGRLAMLAFLGFIVQH 219
DPI YPGG F+PL A +A K KE+ NGRLAM + GF VQ
Sbjct: 184 GLDPI------------YPGGAFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFVQA 231
Query: 220 NVTGKGPFENLLQHISDPWHN 240
VTGKGP ENL H++DP N
Sbjct: 232 IVTGKGPIENLFDHLADPVAN 252
>sp|P27491|CB27_TOBAC Chlorophyll a-b binding protein 7, chloroplastic OS=Nicotiana
tabacum GN=CAB7 PE=3 SV=1
Length = 267
Score = 118 bits (295), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 82/235 (34%), Positives = 124/235 (52%), Gaps = 18/235 (7%)
Query: 20 SRFLTGSSGKLNREVALK--PVSSSASFKVEAKGEWLPGLA--SPTYLNGSLPGDNGFDP 75
S +TG+ + R+ K PVSS + + + ++L + +P+YL G PGD G+D
Sbjct: 24 SSEITGNGKAIMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDT 83
Query: 76 LGLAEDPENLKWYVQAELVNSRWAMLGVVGMLLPEVFTKIGI-INAPQWYDAGKAEYFAS 134
GL+ DPE + E+++ RWAMLG +G + PE+ + G+ W+ AG ++ F+
Sbjct: 84 AGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG-SQIFSE 142
Query: 135 SSTLFVIEFILFHYVEIRR-WQ-DIKNPGSVNQDPIFKQYSLPPNEVG---YPGGIFNPL 189
++ L H I W + G++ ++ P EV YPGG F+PL
Sbjct: 143 GGLDYLGNPSLVHAQSILAIWACQVVLMGAIEG---YRVAGGPLGEVTDPLYPGGSFDPL 199
Query: 190 NFAPTDEA----KEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHN 240
A EA K KE+ NGRLAM + GF VQ VTGKGP +NL+ H++DP +N
Sbjct: 200 GLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLDNLVDHLADPVNN 254
>sp|P27495|CB24_TOBAC Chlorophyll a-b binding protein 40, chloroplastic OS=Nicotiana
tabacum GN=CAB40 PE=2 SV=1
Length = 267
Score = 118 bits (295), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 75/192 (39%), Positives = 103/192 (53%), Gaps = 14/192 (7%)
Query: 59 SPTYLNGSLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVVGMLLPEVFTKIGI- 117
SP+YL G PGD G+D GL+ DPE + E+++ RWAMLG +G + PE+ + G+
Sbjct: 67 SPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVK 126
Query: 118 INAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRR-WQ-DIKNPGSVNQDPIFKQYSLP 175
W+ AG ++ F+ ++ L H I W + G+V ++ P
Sbjct: 127 FGEAVWFKAG-SQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEG---YRVAGGP 182
Query: 176 PNEVG---YPGGIFNPLNFAPTDEA----KEKELANGRLAMLAFLGFIVQHNVTGKGPFE 228
EV YPGG F+PL A EA K KE+ NGRLAM + GF VQ VTGKGP E
Sbjct: 183 LGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 242
Query: 229 NLLQHISDPWHN 240
NL H++DP +N
Sbjct: 243 NLADHLADPVNN 254
>sp|P13851|CB21_SINAL Chlorophyll a-b binding protein 1, chloroplastic OS=Sinapis alba
GN=CAB1 PE=3 SV=1
Length = 266
Score = 118 bits (295), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 68/193 (35%), Positives = 98/193 (50%), Gaps = 17/193 (8%)
Query: 60 PTYLNGSLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVVGMLLPEVFTKIGI-I 118
P+YL G PGD G+D GL+ DPE + E+++ RWAMLG +G + PE+ + G+
Sbjct: 66 PSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPELLARNGVKF 125
Query: 119 NAPQWYDAGKA-------EYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQ 171
W+ AG +Y + S + + ++ ++ + P+ +
Sbjct: 126 GEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGEGPLGEA 185
Query: 172 YSLPPNEVGYPGGIFNPLNFAPTDEA----KEKELANGRLAMLAFLGFIVQHNVTGKGPF 227
L YPGG F+PL A EA K KE+ NGRLAM + GF VQ VTGKGP
Sbjct: 186 EDLL-----YPGGSFDPLGLATDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 240
Query: 228 ENLLQHISDPWHN 240
ENL H++DP +N
Sbjct: 241 ENLADHLADPVNN 253
>sp|P12333|CB2A_SPIOL Chlorophyll a-b binding protein, chloroplastic OS=Spinacia oleracea
PE=1 SV=1
Length = 267
Score = 117 bits (294), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 75/202 (37%), Positives = 100/202 (49%), Gaps = 34/202 (16%)
Query: 59 SPTYLNGSLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVVGMLLPEVFTKIGI- 117
SP+YL G PGD G+D GL+ DPE + E+++ RWAMLG +G + PE+ + G+
Sbjct: 67 SPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVK 126
Query: 118 INAPQWYDAGKA-------EYFASSS--------TLFVIEFILFHYVEIRRWQDIKNPGS 162
W+ AG +Y + S ++ + IL VE R P
Sbjct: 127 FGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAG--GPLG 184
Query: 163 VNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTDEA----KEKELANGRLAMLAFLGFIVQ 218
DP+ YPGG F+PL A EA K KE+ NGRLAM + GF VQ
Sbjct: 185 EVVDPL------------YPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQ 232
Query: 219 HNVTGKGPFENLLQHISDPWHN 240
VTGKGP ENL H++DP +N
Sbjct: 233 AIVTGKGPLENLADHLADPVNN 254
>sp|P14278|CB24_SOLLC Chlorophyll a-b binding protein 4, chloroplastic OS=Solanum
lycopersicum GN=CAB4 PE=2 SV=1
Length = 265
Score = 117 bits (294), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 87/266 (32%), Positives = 125/266 (46%), Gaps = 40/266 (15%)
Query: 1 MATVTTQASAAVFRPCA-SKSRFLTGSSGKLNREVALKPVSSSASFKV---EAKGEWLPG 56
MAT Q SA V + S++ F+ + ++ SA + E + ++L
Sbjct: 1 MATCAIQQSAFVGQAVGKSQNEFIRKVGNFGEGRITMRRTVKSAPQSIWYGEDRPKYLGP 60
Query: 57 LA--SPTYLNGSLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVVGMLLPEVFTK 114
+ +P+YL G PGD G+D GL+ DPE + E+++ RWAMLG +G + PE+ +K
Sbjct: 61 FSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSK 120
Query: 115 IGI-INAPQWYDAGKA-------EYFASSS--------TLFVIEFILFHYVEIRRWQDIK 158
G+ W+ AG +Y + + ++ + +L +VE R
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMGFVEGYRVGG-- 178
Query: 159 NPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTDEA----KEKELANGRLAMLAFLG 214
P D I YPGG F+PL A EA K KE+ NGRLAM + G
Sbjct: 179 GPLGEGLDKI------------YPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFG 226
Query: 215 FIVQHNVTGKGPFENLLQHISDPWHN 240
F VQ VTGKGP ENL HI+DP N
Sbjct: 227 FFVQAIVTGKGPIENLSDHINDPVAN 252
>sp|P27496|CB25_TOBAC Chlorophyll a-b binding protein 50, chloroplastic OS=Nicotiana
tabacum GN=CAB50 PE=2 SV=1
Length = 267
Score = 117 bits (293), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 90/258 (34%), Positives = 130/258 (50%), Gaps = 22/258 (8%)
Query: 1 MATVTTQASAAVFRPCASK----SRFLTGSSGKLNREVALK--PVSSSASFKVEAKGEWL 54
MA T S++ F A K S +TG+ R+ K P+SS + + + ++L
Sbjct: 1 MAAATMALSSSSFAGKAVKLSPSSSEITGNGKVTMRKTVTKAKPLSSGSPWYGPDRVKYL 60
Query: 55 PGLA--SPTYLNGSLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVVGMLLPEVF 112
+ SP+YL G PGD G+D GL+ DPE + E+++ RWAMLG +G + PE+
Sbjct: 61 GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120
Query: 113 TKIGI-INAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRR-WQ-DIKNPGSVNQDPIF 169
+ G+ W+ AG ++ F+ ++ L H I W + G+V +
Sbjct: 121 ARNGVKFGEAVWFKAG-SQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEG---Y 176
Query: 170 KQYSLPPNEVG---YPGGIFNPLNFAPTDEA----KEKELANGRLAMLAFLGFIVQHNVT 222
+ P EV YPGG F+PL A EA K K + NGRLAM + GF VQ VT
Sbjct: 177 RVAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKHIKNGRLAMFSMFGFFVQAIVT 236
Query: 223 GKGPFENLLQHISDPWHN 240
GKGP ENL H++DP +N
Sbjct: 237 GKGPLENLADHLADPVNN 254
>sp|P92919|CB23_APIGR Chlorophyll a-b binding protein, chloroplastic OS=Apium graveolens
GN=LHC0 PE=1 SV=1
Length = 264
Score = 117 bits (293), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 75/202 (37%), Positives = 102/202 (50%), Gaps = 34/202 (16%)
Query: 59 SPTYLNGSLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVVGMLLPEVFTKIGI- 117
+P+YL G PGD G+D GL+ DPE + E+++SRWAMLG +G + PE+ + G+
Sbjct: 64 APSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVK 123
Query: 118 INAPQWYDAGKA-------EYFASSS--------TLFVIEFILFHYVEIRRWQDIKNPGS 162
W+ AG +Y + S +++ + IL VE R P
Sbjct: 124 FGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILSIWATQVILMGAVEGYRVAG--GPLG 181
Query: 163 VNQDPIFKQYSLPPNEVGYPGGIFNPLNFAP----TDEAKEKELANGRLAMLAFLGFIVQ 218
DP+ YPGG F+PL A + E K KEL NGRLAM + GF VQ
Sbjct: 182 EIVDPL------------YPGGSFDPLGLAEDPERSAELKVKELKNGRLAMFSMFGFFVQ 229
Query: 219 HNVTGKGPFENLLQHISDPWHN 240
VTGKGP ENL H++DP +N
Sbjct: 230 AIVTGKGPLENLADHLADPVNN 251
>sp|P07370|CB2B_SOLLC Chlorophyll a-b binding protein 1B, chloroplastic OS=Solanum
lycopersicum GN=CAB1B PE=3 SV=1
Length = 265
Score = 117 bits (293), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 75/192 (39%), Positives = 103/192 (53%), Gaps = 14/192 (7%)
Query: 59 SPTYLNGSLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVVGMLLPEVFTKIGI- 117
SP+YL G PGD G+D GL+ DPE + E+++ RWAMLG +G + PE+ + G+
Sbjct: 65 SPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVK 124
Query: 118 INAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRR-WQ-DIKNPGSVNQDPIFKQYSLP 175
W+ AG ++ F+ ++ L H I W + G+V ++ P
Sbjct: 125 FGEAVWFKAG-SQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEG---YRIAGGP 180
Query: 176 PNEVG---YPGGIFNPLNFAPTDEA----KEKELANGRLAMLAFLGFIVQHNVTGKGPFE 228
EV YPGG F+PL A EA K KE+ NGRLAM + GF VQ VTGKGP E
Sbjct: 181 LGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 240
Query: 229 NLLQHISDPWHN 240
NL H++DP +N
Sbjct: 241 NLADHLADPVNN 252
>sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplastic OS=Physcomitrella
patens subsp. patens PE=3 SV=1
Length = 269
Score = 117 bits (292), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 76/192 (39%), Positives = 102/192 (53%), Gaps = 14/192 (7%)
Query: 59 SPTYLNGSLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVVGMLLPEVFTKIGI- 117
+P+YLNG GD G+D GL+ DPE + E++++RWAMLG +G L PE+ K G+
Sbjct: 68 TPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVK 127
Query: 118 INAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRR-WQ-DIKNPGSVNQDPIFKQYSLP 175
W+ AG A+ F+ ++ L H I W + G+V ++ P
Sbjct: 128 FGEAVWFKAG-AQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEG---YRVAGGP 183
Query: 176 PNEVG---YPGGIFNPLNFAPT----DEAKEKELANGRLAMLAFLGFIVQHNVTGKGPFE 228
EV YPGG F+PL A E K KE+ NGRLAM + GF VQ VTGKGP E
Sbjct: 184 LGEVTDPIYPGGSFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 243
Query: 229 NLLQHISDPWHN 240
NL H++DP N
Sbjct: 244 NLNDHLADPVAN 255
>sp|P15193|CB2A_PINSY Chlorophyll a-b binding protein type 2 member 1A, chloroplastic
OS=Pinus sylvestris PE=2 SV=1
Length = 278
Score = 117 bits (292), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 74/191 (38%), Positives = 103/191 (53%), Gaps = 14/191 (7%)
Query: 60 PTYLNGSLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVVGMLLPEVFTKIGI-I 118
P+YL G PGD G+D GL+ DPE + E+++SRWAMLG +G + PE+ + G+
Sbjct: 79 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKF 138
Query: 119 NAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRR-WQ-DIKNPGSVNQDPIFKQYSLPP 176
W+ AG A+ F+ ++ L H I W + G++ ++ P
Sbjct: 139 GEAVWFKAG-AQIFSEGGLDYLGSPQLIHAQSILAIWACQVILMGAIEG---YRVAGGPL 194
Query: 177 NEVG---YPGGIFNPLNFAPTDEA----KEKELANGRLAMLAFLGFIVQHNVTGKGPFEN 229
EV YPGG F+PL A +A K KE+ NGRLAM + GF VQ VTGKGP EN
Sbjct: 195 GEVTDPIYPGGNFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIEN 254
Query: 230 LLQHISDPWHN 240
L H++DP +N
Sbjct: 255 LADHLADPVNN 265
>sp|P24006|CB2A_PYRPY Chlorophyll a-b binding protein 1A, chloroplastic OS=Pyrus
pyrifolia PE=2 SV=1
Length = 278
Score = 117 bits (292), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/191 (38%), Positives = 103/191 (53%), Gaps = 14/191 (7%)
Query: 60 PTYLNGSLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVVGMLLPEVFTKIGI-I 118
P+YL G PGD G+D GL+ DPE + E+++SRWAMLG +G + PE+ + G+
Sbjct: 79 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKF 138
Query: 119 NAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRR-WQ-DIKNPGSVNQDPIFKQYSLPP 176
W+ AG A+ F+ ++ L H I W + G++ ++ P
Sbjct: 139 GEAVWFKAG-AQIFSEGGLDYLGSPQLIHAQSILAIWACQVILMGAIEG---YRVAGGPL 194
Query: 177 NEVG---YPGGIFNPLNFAPTDEA----KEKELANGRLAMLAFLGFIVQHNVTGKGPFEN 229
EV YPGG F+PL A +A K KE+ NGRLAM + GF VQ VTGKGP EN
Sbjct: 195 GEVTDPIYPGGNFDPLGLADDPDAFADVKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIEN 254
Query: 230 LLQHISDPWHN 240
L H++DP +N
Sbjct: 255 LADHLADPVNN 265
>sp|P04784|CB21_WHEAT Chlorophyll a-b binding protein, chloroplastic OS=Triticum aestivum
GN=WHAB1.6 PE=3 SV=1
Length = 266
Score = 117 bits (292), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 91/267 (34%), Positives = 127/267 (47%), Gaps = 41/267 (15%)
Query: 1 MATVTTQASAAVFRPCASK---SRFLTGSSGKLNREVALKP--VSSSASFKVEAKGEWLP 55
MA T S++ F A K S L G + R+ A K VSSS+ + + +L
Sbjct: 1 MAATTMSLSSSSFAGKAVKNLPSSALIGDARVNMRKTAAKAKQVSSSSPWYGSDRVLYLG 60
Query: 56 GLAS--PTYLNGSLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVVGMLLPEVFT 113
L+ P+YL G PGD G+D GL+ DPE + E+++ RWAMLG +G + PE+
Sbjct: 61 PLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 120
Query: 114 KIGI-INAPQWYDAGKA-------EYFASSS--------TLFVIEFILFHYVEIRRWQDI 157
+ G+ W+ AG +Y + S ++ + +L VE R
Sbjct: 121 RNGVKFGEAGWFKAGSQIFSDGGLDYLGNPSLVHAQSLLAIWACQVVLMGAVEGYRIAG- 179
Query: 158 KNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTDEA----KEKELANGRLAMLAFL 213
P DP+ YPGG F+PL A +A K KE+ NGRLAM +
Sbjct: 180 -GPLGEIVDPL------------YPGGSFDPLGLAERPQAFAELKVKEIKNGRLAMFSMF 226
Query: 214 GFIVQHNVTGKGPFENLLQHISDPWHN 240
GF VQ VTGKGP E+L HI+DP +N
Sbjct: 227 GFFVQAIVTGKGPLEDLADHIADPVNN 253
>sp|P22686|CB2_CHLMO Chlorophyll a-b binding protein of LHCII type I, chloroplastic
OS=Chlamydomonas moewusii PE=2 SV=1
Length = 256
Score = 117 bits (292), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/203 (35%), Positives = 101/203 (49%), Gaps = 35/203 (17%)
Query: 59 SPTYLNGSLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVVGMLLPEVF-TKIGI 117
+P YL G PGD G+D GL+ DPE K Y + E++++RWA+LG +G+L PE+ T G+
Sbjct: 55 TPAYLTGEFPGDYGWDTAGLSADPETFKKYRELEVIHARWALLGALGILTPELLSTYAGV 114
Query: 118 -INAPQWYDAGKA-------EYFASSSTL--------FVIEFILFHYVEIRRWQDIKNPG 161
P W+ AG +Y S + + ++ +L +E R P
Sbjct: 115 KFGEPVWFKAGAQIFSEGGLDYLGSPALIHAQNIVATLAVQVVLMGLIEGYRVNG--GPA 172
Query: 162 SVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPT----DEAKEKELANGRLAMLAFLGFIV 217
DP+ YPG F+PL A E K KE+ NGRLAM + GF V
Sbjct: 173 GEGLDPL------------YPGESFDPLGLADDPDTFAELKVKEIKNGRLAMFSCFGFFV 220
Query: 218 QHNVTGKGPFENLLQHISDPWHN 240
Q VTGKGP +NL H++DP N
Sbjct: 221 QAIVTGKGPIQNLADHLADPGTN 243
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.135 0.415
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 99,063,902
Number of Sequences: 539616
Number of extensions: 4386364
Number of successful extensions: 8366
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 90
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 7992
Number of HSP's gapped (non-prelim): 158
length of query: 249
length of database: 191,569,459
effective HSP length: 115
effective length of query: 134
effective length of database: 129,513,619
effective search space: 17354824946
effective search space used: 17354824946
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)