Your job contains 1 sequence.
>025684
MQVIALTEELLATAKQNAISVSETGTSASASPNLLQSKENKTESGSISDNQEKLAVGTKV
QAVYSEDGEWYDATIEAITPNGYYVTYDSWGNKEEVDPANVRPVNLLVEAEKVAEATKLA
IKRKIEQAAASDFQSKSLPAKLHINPDDPEDVKAAKRKKIHAFKSKMRFEQLEVTQNKRQ
NAWQQFQTTKGKTKKVGFFSGRKRESIFKSPDDPYGKVGVTGSGKGLTDFQKREKHLHLK
GGGIADTDD
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 025684
(249 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2065269 - symbol:AT2G02570 species:3702 "Arabi... 824 3.6e-82 1
DICTYBASE|DDB_G0293636 - symbol:DDB_G0293636 "putative sp... 251 1.9e-21 1
UNIPROTKB|E1BQK7 - symbol:SMNDC1 "Uncharacterized protein... 100 5.8e-07 2
UNIPROTKB|G4MVK7 - symbol:MGG_08894 "Uncharacterized prot... 103 0.00012 2
MGI|MGI:109257 - symbol:Smn1 "survival motor neuron 1" sp... 112 0.00032 1
UNIPROTKB|I3LSV5 - symbol:I3LSV5 "Uncharacterized protein... 110 0.00058 1
FB|FBgn0039977 - symbol:CG17454 species:7227 "Drosophila ... 108 0.00064 1
>TAIR|locus:2065269 [details] [associations]
symbol:AT2G02570 species:3702 "Arabidopsis thaliana"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0010413 "glucuronoxylan
metabolic process" evidence=RCA] [GO:0045492 "xylan biosynthetic
process" evidence=RCA] InterPro:IPR010304 Pfam:PF06003
InterPro:IPR002999 GO:GO:0005634 GO:GO:0005737 EMBL:CP002685
GO:GO:0006397 GO:GO:0003723 SMART:SM00333 PROSITE:PS50304 KO:K12839
OMA:NNKAYSK EMBL:BT002938 EMBL:BT004365 IPI:IPI00516996
RefSeq:NP_001077871.1 RefSeq:NP_178361.2 RefSeq:NP_849927.1
UniGene:At.21657 ProteinModelPortal:Q84K41 SMR:Q84K41 IntAct:Q84K41
PRIDE:Q84K41 EnsemblPlants:AT2G02570.1 EnsemblPlants:AT2G02570.2
EnsemblPlants:AT2G02570.4 GeneID:814787 KEGG:ath:AT2G02570
TAIR:At2g02570 InParanoid:Q84K41 PhylomeDB:Q84K41
ProtClustDB:CLSN2690631 Genevestigator:Q84K41 Uniprot:Q84K41
Length = 300
Score = 824 (295.1 bits), Expect = 3.6e-82, P = 3.6e-82
Identities = 164/252 (65%), Positives = 194/252 (76%)
Query: 2 QVIALTEELLATAKQNAISVSETGTSASASPNL--LQSKENKTESGSISDNQEKLAVGTK 59
+VIALTEE+LATAKQN IS+S+ G SA A+P L+ KT + ++ K VGTK
Sbjct: 49 EVIALTEEVLATAKQNEISLSDAGVSAEATPGSPDLEGAWEKTGLRNDPIHEGKFPVGTK 108
Query: 60 VQAVYSEDGEWYDATIEAITPNGYYVTYDSWGNKEEVDPANVRPV--NLLVEAEKVAEAT 117
VQAV+S+DGEWYDATIEA T NGY+V YD WGNKEEVDP NVRP+ N +VEAE++A+AT
Sbjct: 109 VQAVFSDDGEWYDATIEAHTANGYFVAYDEWGNKEEVDPDNVRPIEQNAIVEAERLAQAT 168
Query: 118 KLAIKRKIEQAAASDFQSKSLPAKLHINPDDPEDVKAAKRKKIHAFKSKMRFEQLEVTQN 177
K A+KRKIE+AA+SD+Q+K+LPAKL I+P+DPEDVK AKRKKIHAFKSK RFEQLEV QN
Sbjct: 169 KNALKRKIEKAASSDYQTKTLPAKLKIDPNDPEDVKIAKRKKIHAFKSKARFEQLEVVQN 228
Query: 178 KRQNAWXXXXXXXXXXXXXXXXXXRKRESIFKSPDDPYGKVGVTGSGKGLTDFQKREKHL 237
K+QN W RK+ESIFKSP+DP+GKVGVTGSGKGLTDFQKREKHL
Sbjct: 229 KKQNDWQQFQTTKAKTKKVGFFTGRKKESIFKSPEDPFGKVGVTGSGKGLTDFQKREKHL 288
Query: 238 HLKGGGIADTDD 249
HLK G TD+
Sbjct: 289 HLKSGNAEGTDE 300
>DICTYBASE|DDB_G0293636 [details] [associations]
symbol:DDB_G0293636 "putative splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR002999 dictyBase:DDB_G0293636 Pfam:PF00567
SMART:SM00333 PROSITE:PS50304 EMBL:AAFI02000218 KO:K12839
RefSeq:XP_629067.1 ProteinModelPortal:Q54BG2
EnsemblProtists:DDB0233601 GeneID:8629359 KEGG:ddi:DDB_G0293636
eggNOG:KOG3026 InParanoid:Q54BG2 OMA:MTESQQF Uniprot:Q54BG2
Length = 324
Score = 251 (93.4 bits), Expect = 1.9e-21, P = 1.9e-21
Identities = 71/222 (31%), Positives = 112/222 (50%)
Query: 15 KQNAISVSETGTSASASPNLLQSKENKTESGSISDN---QEKLAVGTKVQAVYSEDGEWY 71
K N I + + ++ N + N S I DN + K+ VG+ + YS DG WY
Sbjct: 100 KNNNIIIPPPTINKKSTFN--DNDNNNIPSNIIEDNSFSETKMTVGSVCEGQYSVDGIWY 157
Query: 72 DATIEAITPNG-YYVTYDSWGNKEEVDPANVRPVNLLVEAEKVAEATKLAIKRKIEQAAA 130
A I++I +G + VTY +GN E + +RP ++ +A T L K+ ++ A
Sbjct: 158 RAKIDSINKDGTFVVTYTDYGNTETLTFDKIRPPTRSLKL--LANQT-LEQKKYLQ---A 211
Query: 131 SDFQSKSLPAKLHINPDDPEDVKAAKRKKIHAFKSKMRFEQLEVTQNKRQNAWXXXXXXX 190
D Q + +P L I P+D E+VK K+KKIH+ KS R +++E ++ AW
Sbjct: 212 PD-QIQVIPKSLKILPEDSEEVKKQKQKKIHSIKSMNRLKKVEEEGKQKTQAWKDFVNKP 270
Query: 191 XXXXXXXXXXXRKRESIFKSPDDPYGKVGVTGSGKGLTDFQK 232
RK+ S+F + D + KVGV GSG+G+T+ Q+
Sbjct: 271 KKSIPGTFTD-RKKTSMFSTGDGIHSKVGVIGSGRGMTESQQ 311
>UNIPROTKB|E1BQK7 [details] [associations]
symbol:SMNDC1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] InterPro:IPR010304
Pfam:PF06003 InterPro:IPR002999 GO:GO:0005634 GO:GO:0005737
GO:GO:0006397 GO:GO:0003723 SMART:SM00333 PROSITE:PS50304
GeneTree:ENSGT00560000077236 CTD:10285 KO:K12839 OMA:NNKAYSK
EMBL:AADN02030883 IPI:IPI00582553 RefSeq:XP_421753.2
Ensembl:ENSGALT00000013945 GeneID:423889 KEGG:gga:423889
NextBio:20826290 Uniprot:E1BQK7
Length = 238
Score = 100 (40.3 bits), Expect = 5.8e-07, Sum P(2) = 5.8e-07
Identities = 36/112 (32%), Positives = 54/112 (48%)
Query: 8 EELLATAK--QNAISVSETGTSASASPNLLQSKENKTESGSISDNQEKLAVGTKVQAVYS 65
E+LL K Q I +++ S S L S + + ++ + K VG + A++S
Sbjct: 30 EDLLKLKKDLQEVIELTKDLLSTQPSETLASSDSS---ASALPSHSWK--VGDRCMAIWS 84
Query: 66 EDGEWYDATIEAITP-NGYY-VTYDSWGNKEEVDPANVRPVNLLVEAEKVAE 115
EDG+ Y+A IE I NG VT+ +GN E N++PV E K E
Sbjct: 85 EDGQCYEAEIEEIDEENGTAAVTFAGYGNAEVTPLFNLKPVE---EGRKAKE 133
Score = 72 (30.4 bits), Expect = 5.8e-07, Sum P(2) = 5.8e-07
Identities = 36/128 (28%), Positives = 52/128 (40%)
Query: 114 AEATKLAIKRKIEQA--AASDFQSKSLPAKLHINPDDPEDVKAAKRKKIHAFKSKMRFEQ 171
AE T L + +E+ A D +K + K I + K+KK A K R ++
Sbjct: 114 AEVTPLFNLKPVEEGRKAKEDSGNKPMSKKEMIAQQ-----REYKKKK--ALKKAQRIKE 166
Query: 172 LEVTQNKRQNAWXXXXXXXXXXXXXXXXXXRKRESIFKSPDDPYGKVGVTGSG---KGLT 228
LE + ++ W KR SIF SP+ GKVGV G K +T
Sbjct: 167 LEQEREDQKVKWQQFNNRAYSKNKKGQV---KR-SIFASPESVTGKVGVGTCGIADKPMT 222
Query: 229 DFQKREKH 236
+Q K+
Sbjct: 223 QYQDTSKY 230
>UNIPROTKB|G4MVK7 [details] [associations]
symbol:MGG_08894 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
EMBL:CM001232 KO:K12839 RefSeq:XP_003713923.1
ProteinModelPortal:G4MVK7 EnsemblFungi:MGG_08894T0 GeneID:2679880
KEGG:mgr:MGG_08894 Uniprot:G4MVK7
Length = 328
Score = 103 (41.3 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 32/116 (27%), Positives = 55/116 (47%)
Query: 127 QAAASDFQSKS--LPAKLHINPDDPED--VKAAKRKKIHAFKSKMRFEQLEVTQNKRQNA 182
Q+AA+ S L A + P P+D AA K + FK ++LE +NK Q+
Sbjct: 216 QSAAAMRNSSGVVLSASPSLYPQKPQDGGEGAADAKPVKKFKKIKATKELEAGKNKWQD- 274
Query: 183 WXXXXXXXXXXXXXXXXXXRKRESIFKSPDDPYGKVGVTGSGKGLTDFQKREKHLH 238
+K++S+F++P+ +G+VG TGSG+ + R +H++
Sbjct: 275 ---------FNAKSKFGKSQKKDSMFRTPEGVHGRVGFTGSGQAMRKDASRSRHIY 321
Score = 51 (23.0 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 16/57 (28%), Positives = 28/57 (49%)
Query: 65 SEDGEWYDATIEAITPNG----YYVTYDSWGNKEEVDPANVRPVNLLVEAEKVAEAT 117
S D +Y A I ++T + Y V + S+G E + +++PV + K A+ T
Sbjct: 125 SGDKGFYPARITSVTGSSSARMYTVKFKSYGTVETLRSHDIKPVTAPAQKRK-ADGT 180
>MGI|MGI:109257 [details] [associations]
symbol:Smn1 "survival motor neuron 1" species:10090 "Mus
musculus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005681 "spliceosomal complex"
evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO;IDA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0007019 "microtubule depolymerization"
evidence=IMP] [GO:0007409 "axonogenesis" evidence=IMP] [GO:0008380
"RNA splicing" evidence=IEA] [GO:0015030 "Cajal body" evidence=ISO]
[GO:0017134 "fibroblast growth factor binding" evidence=ISO]
InterPro:IPR010304 Pfam:PF06003 InterPro:IPR002999 MGI:MGI:109257
GO:GO:0005634 GO:GO:0005737 GO:GO:0005730 GO:GO:0008380
GO:GO:0007268 GO:GO:0006397 GO:GO:0005681 GO:GO:0003723
GO:GO:0007409 GO:GO:0015030 SMART:SM00333 PROSITE:PS50304
GO:GO:0007019 CTD:6606 eggNOG:NOG296671 HOVERGEN:HBG000211
KO:K13129 OMA:GYYLGLK OrthoDB:EOG4W9J54 HOGENOM:HOG000232199
EMBL:U63294 EMBL:U77714 EMBL:Y12835 EMBL:BC045158 IPI:IPI00129918
RefSeq:NP_001239558.1 RefSeq:NP_035550.1 UniGene:Mm.2025
ProteinModelPortal:P97801 SMR:P97801 IntAct:P97801 STRING:P97801
PhosphoSite:P97801 PaxDb:P97801 PRIDE:P97801
Ensembl:ENSMUST00000022147 GeneID:20595 KEGG:mmu:20595
InParanoid:P97801 NextBio:298911 Bgee:P97801 CleanEx:MM_SMN1
Genevestigator:P97801 GermOnline:ENSMUSG00000021645 Uniprot:P97801
Length = 288
Score = 112 (44.5 bits), Expect = 0.00032, P = 0.00032
Identities = 38/127 (29%), Positives = 62/127 (48%)
Query: 21 VSETGTSASASPNLLQSKENKTESGSISDNQEKLAVGTKVQAVYSEDGEWYDATIEAIT- 79
+ ET + +K+NK++ + + ++ VG K AV+SEDG Y ATI +I
Sbjct: 56 ICETPDKPKGTARRKPAKKNKSQKKNATTPLKQWKVGDKCSAVWSEDGCIYPATITSIDF 115
Query: 80 -PNGYYVTYDSWGNKEEVDPANVRPVNLLVEAEKVAEATKLAIKRKIEQAAASDFQ--SK 136
V Y +GN+EE N+ +LL +VA +T+ + Q + D + S+
Sbjct: 116 KRETCVVVYTGYGNREE---QNLS--DLLSPTCEVANSTEQNTQENESQVSTDDSEHSSR 170
Query: 137 SLPAKLH 143
SL +K H
Sbjct: 171 SLRSKAH 177
>UNIPROTKB|I3LSV5 [details] [associations]
symbol:I3LSV5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006397 "mRNA processing" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR010304
Pfam:PF06003 InterPro:IPR002999 GO:GO:0005634 GO:GO:0005737
GO:GO:0006397 GO:GO:0003723 SMART:SM00333 PROSITE:PS50304
GeneTree:ENSGT00560000077236 EMBL:FP102558
Ensembl:ENSSSCT00000030798 OMA:DESSGIC Uniprot:I3LSV5
Length = 296
Score = 110 (43.8 bits), Expect = 0.00058, P = 0.00058
Identities = 32/117 (27%), Positives = 58/117 (49%)
Query: 21 VSETGTSASASPNLLQSKENKTESGSISDNQEKLAVGTKVQAVYSEDGEWYDATIEAITP 80
+SE A+P K+NK + + + + ++ VG + A++SEDG Y ATI++
Sbjct: 65 ISEASDKPKATPKRKPPKKNKNQKKNNTASLKQWKVGDRCSAIWSEDGCIYPATIDSFKR 124
Query: 81 NGYYVTYDSWGNKEEVDPANVRPVNLLVEAEKVAEATKLAIKRKIEQAAASDFQSKS 137
V Y +G++EE N+ +LL +VA T+ + ++ S +S+S
Sbjct: 125 ETCIVVYTGYGHREE---QNL--YDLLSPTSEVANNTEENAQENENESQISTDESES 176
>FB|FBgn0039977 [details] [associations]
symbol:CG17454 species:7227 "Drosophila melanogaster"
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;ISS]
[GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IC] [GO:0000381 "regulation of
alternative mRNA splicing, via spliceosome" evidence=IMP]
[GO:0071011 "precatalytic spliceosome" evidence=IDA]
InterPro:IPR010304 Pfam:PF06003 InterPro:IPR002999 GO:GO:0005737
EMBL:AE014296 GO:GO:0003723 SMART:SM00333 PROSITE:PS50304
GO:GO:0071011 GO:GO:0000398 GO:GO:0000381
GeneTree:ENSGT00560000077236 eggNOG:NOG251685 KO:K12839 HSSP:Q16637
OMA:NNKAYSK EMBL:AY061350 RefSeq:NP_001138001.1 UniGene:Dm.33433
SMR:Q95RI7 STRING:Q95RI7 EnsemblMetazoa:FBtr0299868 GeneID:7354399
KEGG:dme:Dmel_CG17454 UCSC:CG17454-RA FlyBase:FBgn0039977
InParanoid:Q95RI7 OrthoDB:EOG4G79FG GenomeRNAi:7354399
NextBio:20902822 Uniprot:Q95RI7
Length = 243
Score = 108 (43.1 bits), Expect = 0.00064, P = 0.00064
Identities = 37/150 (24%), Positives = 62/150 (41%)
Query: 90 WGNKEEVDPANVRPVNLLVEAEKVAEATKLAIKRKIEQAAASDFQSKSLPAKLHINPDDP 149
W + A + ++ E + +A + + + +++ P+ P+
Sbjct: 102 WKEDRQYYDATIEDISSTGEVNVIFDAYQNRSTTHVNELRERTIRNEVFPSNKRHRPNQK 161
Query: 150 EDVKAAKRKKIHAFKSKMRFEQLEVTQNKRQNAWXXXXXXXXXXXXXXXXXXRKRESIFK 209
E +K K+KK + RF+ LE + +N W K SIF
Sbjct: 162 EYLKKRKQKK------QQRFKDLEEERESDKNKWLNFNNKNQKKNGM------KARSIFA 209
Query: 210 SPDDPYGKVGV--TGS-GKGLTDFQKREKH 236
SPD+ G+VGV G+ GKG+TDF EK+
Sbjct: 210 SPDNVSGRVGVGTCGTAGKGMTDFTVGEKY 239
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.307 0.125 0.344 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 249 231 0.00084 113 3 11 23 0.39 34
32 0.42 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 7
No. of states in DFA: 580 (62 KB)
Total size of DFA: 161 KB (2095 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 22.25u 0.16s 22.41t Elapsed: 00:00:01
Total cpu time: 22.25u 0.16s 22.41t Elapsed: 00:00:01
Start: Tue May 21 00:14:49 2013 End: Tue May 21 00:14:50 2013