Query 025684
Match_columns 249
No_of_seqs 210 out of 624
Neff 5.6
Searched_HMMs 29240
Date Mon Mar 25 15:22:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025684.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/025684hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4a4f_A SurviVal of motor neuro 99.8 1.9E-20 6.4E-25 135.0 7.9 58 49-106 4-63 (64)
2 1mhn_A SurviVal motor neuron p 99.8 1.8E-20 6.1E-25 132.9 7.4 55 52-106 2-58 (59)
3 1g5v_A SurviVal motor neuron p 99.8 3.3E-20 1.1E-24 142.0 7.5 58 50-107 7-66 (88)
4 3s6w_A Tudor domain-containing 99.8 2.8E-20 9.5E-25 129.5 6.4 52 53-104 1-54 (54)
5 3pnw_C Tudor domain-containing 99.8 6.3E-19 2.2E-23 131.6 6.9 56 51-106 15-72 (77)
6 2d9t_A Tudor domain-containing 99.8 1.1E-18 3.8E-23 130.4 7.8 56 51-106 7-64 (78)
7 2equ_A PHD finger protein 20-l 99.7 6.8E-18 2.3E-22 125.3 7.8 54 51-106 7-61 (74)
8 3fdr_A Tudor and KH domain-con 99.7 4.2E-16 1.5E-20 119.1 9.3 55 52-106 26-81 (94)
9 2ldm_A Uncharacterized protein 99.5 1.2E-17 4.1E-22 125.8 0.0 54 52-107 5-59 (81)
10 3p8d_A Medulloblastoma antigen 99.6 6.9E-16 2.4E-20 112.3 6.5 53 52-106 5-58 (67)
11 3qii_A PHD finger protein 20; 99.6 1.2E-15 4.1E-20 115.6 6.5 54 51-106 19-73 (85)
12 2diq_A Tudor and KH domain-con 99.6 2.1E-15 7E-20 118.5 7.2 55 52-106 31-86 (110)
13 2eqk_A Tudor domain-containing 99.5 1.4E-14 4.7E-19 109.8 7.7 56 51-106 19-75 (85)
14 2l8d_A Lamin-B receptor; DNA b 99.4 2.3E-13 7.8E-18 97.7 6.9 55 51-106 7-63 (66)
15 2dig_A Lamin-B receptor; tudor 99.4 5.7E-13 1.9E-17 95.9 7.5 56 50-106 9-66 (68)
16 3ntk_A Maternal protein tudor; 99.4 3.8E-13 1.3E-17 112.8 7.5 53 52-106 46-99 (169)
17 4b9w_A TDRD1, tudor domain-con 99.4 5.5E-13 1.9E-17 114.4 7.5 55 52-106 64-119 (201)
18 2wac_A CG7008-PA; unknown func 99.4 6.9E-13 2.3E-17 113.5 7.4 55 52-106 50-104 (218)
19 4b9x_A TDRD1, tudor domain-con 99.4 8E-13 2.7E-17 115.4 6.9 55 52-106 64-119 (226)
20 2hqx_A P100 CO-activator tudor 99.3 3.7E-12 1.3E-16 111.7 7.6 54 52-106 64-118 (246)
21 3bdl_A Staphylococcal nuclease 99.1 7.1E-11 2.4E-15 115.6 6.8 54 52-106 410-464 (570)
22 2eqj_A Metal-response element- 98.8 1.4E-08 4.8E-13 73.2 7.6 53 50-104 10-64 (66)
23 4hcz_A PHD finger protein 1; p 98.6 9E-08 3.1E-12 67.2 6.6 51 53-105 3-55 (58)
24 2xk0_A Polycomb protein PCL; t 98.5 4.5E-07 1.5E-11 65.7 8.0 52 52-105 14-65 (69)
25 2e5p_A Protein PHF1, PHD finge 98.4 6.1E-07 2.1E-11 64.6 7.4 52 52-105 8-61 (68)
26 2e5q_A PHD finger protein 19; 98.4 4.3E-07 1.5E-11 64.5 5.7 51 52-104 6-58 (63)
27 2m0o_A PHD finger protein 1; t 98.4 1.3E-06 4.6E-11 64.4 8.0 53 50-104 23-77 (79)
28 2g3r_A Tumor suppressor P53-bi 98.2 2.6E-06 8.9E-11 68.1 5.9 50 55-105 6-59 (123)
29 1ssf_A Transformation related 98.2 2E-06 6.9E-11 71.3 5.3 48 54-102 9-57 (156)
30 1wgs_A MYST histone acetyltran 98.1 6.6E-06 2.3E-10 66.9 7.5 50 52-102 11-68 (133)
31 3h8z_A FragIle X mental retard 98.1 6.1E-06 2.1E-10 66.8 7.0 56 52-107 59-120 (128)
32 2f5k_A MORF-related gene 15 is 98.1 4.1E-06 1.4E-10 65.4 5.6 54 50-105 19-78 (102)
33 2eko_A Histone acetyltransfera 98.0 4.7E-06 1.6E-10 63.3 5.1 52 52-103 8-68 (87)
34 2ro0_A Histone acetyltransfera 98.0 9.8E-06 3.3E-10 62.1 6.3 50 52-103 22-77 (92)
35 2lcc_A AT-rich interactive dom 98.0 5.7E-06 2E-10 61.2 4.5 53 52-104 4-64 (76)
36 2eqm_A PHD finger protein 20-l 98.0 2.3E-05 7.8E-10 59.5 7.9 55 50-105 16-76 (88)
37 2rnz_A Histone acetyltransfera 97.9 1.8E-05 6.2E-10 60.8 5.8 50 52-103 24-79 (94)
38 3m9q_A Protein MALE-specific l 97.7 5.1E-05 1.8E-09 59.0 6.1 54 52-105 18-85 (101)
39 2lrq_A Protein MRG15, NUA4 com 96.8 5.9E-06 2E-10 62.4 0.0 54 50-105 9-68 (85)
40 3sd4_A PHD finger protein 20; 97.6 0.00019 6.5E-09 51.7 7.5 54 50-104 9-68 (69)
41 2k3y_A Chromatin modification- 97.6 0.00011 3.8E-09 60.0 5.9 54 51-106 7-104 (136)
42 2bud_A Males-absent on the fir 97.5 0.00016 5.6E-09 55.3 5.9 50 55-105 16-74 (92)
43 3m9p_A MALE-specific lethal 3 97.4 0.00017 5.7E-09 56.9 5.4 54 52-106 18-86 (110)
44 3oa6_A MALE-specific lethal 3 97.3 0.00036 1.2E-08 55.0 5.6 56 50-105 16-85 (110)
45 3h8z_A FragIle X mental retard 97.1 0.00075 2.6E-08 54.5 6.1 50 57-107 5-55 (128)
46 3ask_A E3 ubiquitin-protein li 96.8 0.0017 5.9E-08 57.0 5.8 53 53-105 2-67 (226)
47 2qqr_A JMJC domain-containing 96.7 0.0032 1.1E-07 50.2 6.1 55 52-107 4-59 (118)
48 3e9g_A Chromatin modification- 96.3 0.01 3.5E-07 47.9 6.9 53 52-106 6-102 (130)
49 3db3_A E3 ubiquitin-protein li 96.2 0.0099 3.4E-07 49.5 6.6 54 52-105 9-84 (161)
50 2xdp_A Lysine-specific demethy 95.9 0.0025 8.7E-08 51.1 1.6 54 52-106 5-59 (123)
51 3dlm_A Histone-lysine N-methyl 95.4 0.022 7.4E-07 49.6 5.7 49 52-102 7-59 (213)
52 2xdp_A Lysine-specific demethy 95.2 0.032 1.1E-06 44.7 5.7 53 52-106 63-116 (123)
53 1wjq_A KIAA1798 protein; MBT d 94.5 0.081 2.8E-06 41.3 6.3 57 49-105 9-70 (107)
54 2daq_A WHSC1L1 protein, isofor 94.5 0.087 3E-06 40.5 6.4 54 52-106 7-72 (110)
55 3qby_A Hepatoma-derived growth 94.5 0.049 1.7E-06 41.2 4.8 53 52-105 4-63 (94)
56 1ri0_A Hepatoma-derived growth 94.4 0.07 2.4E-06 41.5 5.7 54 51-105 17-77 (110)
57 2qqr_A JMJC domain-containing 94.4 0.076 2.6E-06 42.2 5.9 53 52-106 62-115 (118)
58 3dlm_A Histone-lysine N-methyl 94.0 0.079 2.7E-06 46.0 5.7 55 49-104 64-124 (213)
59 3mp6_A MBP, SGF29, maltose-bin 93.9 0.084 2.9E-06 50.0 6.3 59 49-107 453-515 (522)
60 1khc_A DNA cytosine-5 methyltr 93.6 0.13 4.4E-06 42.0 6.1 56 52-108 10-73 (147)
61 3mea_A SAGA-associated factor 93.3 0.1 3.5E-06 44.3 5.2 41 51-91 114-157 (180)
62 2l89_A PWWP domain-containing 92.1 0.2 7E-06 38.6 5.0 53 52-105 4-68 (108)
63 2fhd_A RAD9 homolog, DNA repai 92.1 0.34 1.2E-05 39.9 6.5 48 57-105 9-63 (153)
64 4fu6_A PC4 and SFRS1-interacti 91.9 0.15 5.2E-06 41.5 4.3 53 52-105 21-80 (153)
65 1h3z_A Hypothetical 62.8 kDa p 91.7 0.27 9.3E-06 37.7 5.4 54 52-106 5-72 (109)
66 3llr_A DNA (cytosine-5)-methyl 91.1 0.3 1E-05 40.3 5.3 57 52-109 15-79 (154)
67 2gfu_A DNA mismatch repair pro 90.4 0.36 1.2E-05 38.4 5.0 56 51-107 20-87 (134)
68 2biv_A SCML2 protein, sex COMB 90.3 0.64 2.2E-05 40.9 7.0 56 50-105 168-228 (243)
69 1wjr_A KIAA1617 protein; MBT d 89.8 0.41 1.4E-05 38.2 4.9 56 50-105 8-70 (127)
70 2lcd_A AT-rich interactive dom 88.5 0.079 2.7E-06 41.9 0.0 51 51-103 54-105 (118)
71 3pfs_A Bromodomain and PHD fin 83.8 3.2 0.00011 34.3 7.2 55 51-106 34-121 (158)
72 1oz2_A Lethal(3)malignant brai 83.7 2.4 8.1E-05 38.8 7.0 56 50-105 145-205 (331)
73 2biv_A SCML2 protein, sex COMB 83.0 2 6.9E-05 37.7 6.0 55 50-104 59-118 (243)
74 2r58_A Polycomb protein SCM; M 82.2 3 0.0001 37.1 6.9 54 51-104 141-199 (265)
75 1oz2_A Lethal(3)malignant brai 80.9 3 0.0001 38.1 6.5 54 51-104 250-308 (331)
76 3l42_A Peregrin; transcription 79.7 2.4 8.1E-05 34.1 4.8 54 52-106 4-90 (130)
77 2lcd_A AT-rich interactive dom 79.5 0.44 1.5E-05 37.6 0.0 49 52-102 5-54 (118)
78 3ask_A E3 ubiquitin-protein li 77.3 2.2 7.6E-05 37.2 4.3 30 52-81 74-108 (226)
79 3d0f_A Penicillin-binding 1 tr 76.9 2.8 9.6E-05 31.5 4.3 37 67-104 33-69 (106)
80 2e6z_A Transcription elongatio 76.8 5.9 0.0002 27.0 5.5 50 52-102 6-57 (59)
81 2r58_A Polycomb protein SCM; M 76.3 4.4 0.00015 36.0 6.0 55 50-104 31-90 (265)
82 3db3_A E3 ubiquitin-protein li 72.5 3.8 0.00013 34.0 4.2 29 52-80 91-124 (161)
83 3h6z_A Polycomb protein SFMBT; 70.9 8.1 0.00028 36.7 6.8 55 50-104 373-432 (447)
84 3f70_A Lethal(3)malignant brai 69.3 11 0.00038 35.9 7.3 56 50-105 363-423 (456)
85 3feo_A MBT domain-containing p 68.7 10 0.00035 35.9 6.9 56 50-105 359-419 (437)
86 3ut1_A Lethal(3)malignant brai 67.2 11 0.00038 34.2 6.6 56 50-105 244-304 (324)
87 3ut1_A Lethal(3)malignant brai 66.6 8.2 0.00028 35.1 5.6 54 51-104 141-199 (324)
88 2egv_A UPF0088 protein AQ_165; 62.7 8.5 0.00029 33.0 4.7 36 52-89 27-62 (229)
89 1vhy_A Hypothetical protein HI 61.1 12 0.00042 32.5 5.5 37 52-89 34-70 (257)
90 1vhk_A Hypothetical protein YQ 58.4 18 0.0006 31.8 6.1 37 52-89 35-71 (268)
91 3cgm_A SLYD, peptidyl-prolyl C 57.0 17 0.00059 29.3 5.4 35 52-87 83-117 (158)
92 4e8b_A Ribosomal RNA small sub 56.4 18 0.0006 31.4 5.7 37 52-89 32-68 (251)
93 1z85_A Hypothetical protein TM 56.2 17 0.00057 31.4 5.5 37 52-89 39-75 (234)
94 3pmi_A PWWP domain-containing 55.5 22 0.00076 28.4 5.5 53 52-105 3-62 (134)
95 1i84_S Smooth muscle myosin he 54.8 20 0.0007 37.6 6.8 53 53-106 27-79 (1184)
96 3kw2_A Probable R-RNA methyltr 52.8 20 0.00069 31.2 5.5 37 52-89 31-67 (257)
97 3feo_A MBT domain-containing p 52.3 16 0.00056 34.5 5.1 55 51-105 252-315 (437)
98 2kr7_A FKBP-type peptidyl-prol 52.2 25 0.00087 27.9 5.6 36 52-88 92-127 (151)
99 3mea_A SAGA-associated factor 51.0 37 0.0013 28.4 6.6 58 49-106 40-104 (180)
100 1nz9_A Transcription antitermi 50.2 15 0.00051 24.5 3.3 49 52-101 3-55 (58)
101 2eqs_A ATP-dependent RNA helic 48.1 24 0.00083 26.1 4.6 35 67-101 12-48 (103)
102 4db1_A Myosin-7; S1DC, cardiac 47.1 37 0.0013 34.4 7.1 52 52-105 29-80 (783)
103 1luz_A Protein K3, protein K2; 47.0 29 0.001 25.1 4.8 32 67-99 11-43 (88)
104 1kk8_A Myosin heavy chain, str 45.4 43 0.0015 34.2 7.2 53 52-105 26-78 (837)
105 4dt4_A FKBP-type 16 kDa peptid 43.8 43 0.0015 27.4 5.8 33 52-85 111-143 (169)
106 1v6z_A Hypothetical protein TT 40.8 37 0.0012 28.9 5.1 35 52-89 27-61 (228)
107 3h6z_A Polycomb protein SFMBT; 40.4 32 0.0011 32.6 5.0 42 51-92 265-308 (447)
108 2k52_A Uncharacterized protein 38.1 49 0.0017 23.0 4.7 34 67-101 5-38 (80)
109 1g2b_A Spectrin alpha chain; c 37.7 63 0.0022 21.1 5.0 27 49-75 35-61 (62)
110 2k8i_A SLYD, peptidyl-prolyl C 37.7 35 0.0012 27.9 4.3 33 52-86 88-120 (171)
111 2cqo_A Nucleolar protein of 40 37.2 19 0.00067 27.5 2.6 35 67-101 22-56 (119)
112 1jo8_A ABP1P, actin binding pr 34.1 80 0.0027 20.1 5.0 27 50-76 15-41 (58)
113 2bz8_A SH3-domain kinase bindi 34.0 81 0.0028 20.1 5.0 26 50-75 16-41 (58)
114 2jz2_A SSL0352 protein; SH3-li 34.0 43 0.0015 23.6 3.6 49 55-105 3-56 (66)
115 3eg3_A Proto-oncogene tyrosine 33.6 83 0.0028 20.2 5.0 27 49-75 19-46 (63)
116 3zua_A CLD, alpha-hemolysin tr 32.3 25 0.00086 26.9 2.5 40 56-98 75-116 (142)
117 2oaw_A Spectrin alpha chain, b 31.6 98 0.0033 20.0 5.2 28 50-77 16-43 (65)
118 2jvv_A Transcription antitermi 31.2 66 0.0022 26.0 5.0 50 50-102 124-179 (181)
119 1y71_A Kinase-associated prote 31.2 1E+02 0.0034 24.6 5.8 33 53-87 7-39 (130)
120 2dl4_A Protein STAC; SH3 domai 31.2 1.1E+02 0.0039 20.1 6.4 43 49-105 21-63 (68)
121 3f70_A Lethal(3)malignant brai 31.0 85 0.0029 29.7 6.4 53 52-104 39-101 (456)
122 1tg0_A BBC1 protein, myosin ta 31.0 88 0.003 20.7 4.9 29 49-77 21-49 (68)
123 2lj0_A Sorbin and SH3 domain-c 30.4 90 0.0031 21.1 4.9 28 49-76 20-47 (65)
124 2vwf_A Growth factor receptor- 30.4 1E+02 0.0034 19.5 5.0 26 50-75 17-42 (58)
125 1y0m_A 1-phosphatidylinositol- 30.3 98 0.0034 19.9 5.0 26 50-75 18-43 (61)
126 1uti_A GRB2-related adaptor pr 29.9 1E+02 0.0035 19.5 5.0 26 50-75 16-41 (58)
127 3p8b_B Transcription antitermi 29.3 80 0.0027 24.8 5.1 55 50-105 88-146 (152)
128 3h0h_A Proto-oncogene tyrosine 29.1 1E+02 0.0035 20.5 5.0 28 49-76 29-56 (73)
129 1sem_A SEM-5; SRC-homology 3 ( 29.1 1.1E+02 0.0038 19.3 5.0 26 50-75 17-42 (58)
130 1w70_A Neutrophil cytosol fact 28.9 1E+02 0.0035 19.8 4.8 26 50-75 19-44 (60)
131 1uj0_A Signal transducing adap 28.8 1.1E+02 0.0037 19.8 5.0 27 50-76 20-46 (62)
132 1ue9_A Intersectin 2; beta bar 28.7 1E+02 0.0035 21.0 5.1 48 49-105 21-68 (80)
133 2ew3_A SH3-containing GRB2-lik 28.6 97 0.0033 20.8 4.8 26 50-75 18-43 (68)
134 2ycu_A Non muscle myosin 2C, a 28.6 75 0.0026 33.0 5.9 52 53-105 4-55 (995)
135 2ker_A Parvulustat, alpha-amyl 28.3 19 0.00064 26.2 1.0 37 53-93 24-60 (78)
136 3ulr_B SRC substrate cortactin 28.2 90 0.0031 20.2 4.5 27 49-75 23-49 (65)
137 2khj_A 30S ribosomal protein S 27.9 52 0.0018 24.3 3.5 34 67-101 31-64 (109)
138 2djq_A SH3 domain containing r 27.6 1.3E+02 0.0044 19.7 5.3 43 49-105 21-63 (68)
139 3k8u_A Putative ABC transporte 27.6 69 0.0024 24.7 4.4 45 55-99 79-125 (156)
140 1g8x_A Myosin II heavy chain f 27.5 1.1E+02 0.0037 31.9 6.9 52 53-106 28-82 (1010)
141 1cka_A C-CRK N-terminal SH3 do 27.3 1.1E+02 0.0039 19.2 4.8 25 50-74 16-40 (57)
142 1b07_A Protein (proto-oncogene 27.2 1.1E+02 0.0037 20.3 4.8 25 50-74 18-42 (65)
143 2d8j_A FYN-related kinase; SH3 27.2 1E+02 0.0034 20.8 4.7 28 49-76 21-48 (77)
144 2do3_A Transcription elongatio 27.1 1.6E+02 0.0053 20.9 5.7 50 51-102 15-65 (69)
145 1jwi_B Platelet aggregation in 27.0 92 0.0031 22.5 4.8 24 51-74 89-112 (125)
146 2fpe_A C-JUN-amino-terminal ki 27.0 1E+02 0.0036 19.8 4.6 27 49-75 17-43 (62)
147 3ngp_A Spectrin alpha chain, b 26.8 1.2E+02 0.0042 19.2 5.0 27 49-75 20-46 (62)
148 2khi_A 30S ribosomal protein S 26.8 1E+02 0.0034 23.0 5.0 34 67-101 30-63 (115)
149 3mp6_A MBP, SGF29, maltose-bin 26.8 94 0.0032 28.8 5.8 56 50-105 384-450 (522)
150 1x2q_A Signal transducing adap 26.7 1E+02 0.0034 21.6 4.8 28 49-76 31-58 (88)
151 3cqt_A P59-FYN, proto-oncogene 26.6 1.1E+02 0.0039 21.0 5.0 46 50-107 20-65 (79)
152 2k4k_A GSP13, general stress p 26.6 84 0.0029 24.1 4.7 33 68-101 8-40 (130)
153 1x69_A Cortactin isoform A; SH 26.6 1.2E+02 0.0042 20.6 5.2 43 49-105 31-73 (79)
154 2g6f_X RHO guanine nucleotide 26.3 1.2E+02 0.0042 19.2 4.9 26 50-75 19-44 (59)
155 1zlm_A Osteoclast stimulating 25.9 1.3E+02 0.0044 19.0 5.0 26 50-75 18-43 (58)
156 4f14_A Nebulette; SH3 domain, 25.9 1.2E+02 0.0041 19.4 4.8 27 50-76 21-47 (64)
157 1wyx_A CRK-associated substrat 25.4 1.3E+02 0.0046 19.7 5.0 26 50-75 18-46 (69)
158 4b3f_X DNA-binding protein smu 25.2 1E+02 0.0035 29.6 6.0 40 50-89 77-118 (646)
159 1zuy_A Myosin-5 isoform; SH3 d 25.2 1.3E+02 0.0044 18.9 4.8 27 50-76 16-42 (58)
160 2xmf_A Myosin 1E SH3; motor pr 25.0 1.3E+02 0.0046 19.1 4.9 26 50-75 20-45 (60)
161 2drm_A Acanthamoeba myosin IB; 24.8 1.3E+02 0.0046 18.8 5.0 26 50-75 18-43 (58)
162 1gl5_A Tyrosine-protein kinase 24.7 1.3E+02 0.0044 19.7 4.8 42 50-104 17-58 (67)
163 1zx6_A YPR154WP; SH3 domain, p 24.7 1.3E+02 0.0046 19.0 4.8 26 50-75 17-42 (58)
164 2ak5_A RHO guanine nucleotide 24.5 1.5E+02 0.005 19.1 5.0 26 50-75 21-46 (64)
165 2pqh_A Spectrin alpha chain, b 24.5 1.3E+02 0.0045 20.6 5.0 26 50-75 17-42 (80)
166 2a19_A EIF-2- alpha, eukaryoti 24.4 1.2E+02 0.004 24.8 5.4 35 67-101 15-50 (175)
167 3c0c_A Endophilin-A2; endocyto 24.3 1.3E+02 0.0044 20.2 4.8 27 49-75 27-53 (73)
168 2ed1_A 130 kDa phosphatidylino 24.2 92 0.0031 21.1 4.1 28 49-76 24-51 (76)
169 2ysq_A RHO guanine nucleotide 24.1 1.3E+02 0.0043 20.7 4.8 27 49-75 24-50 (81)
170 2fpf_A C-JUN-amino-terminal ki 23.9 1.2E+02 0.0042 20.1 4.6 27 49-75 20-46 (71)
171 2dil_A Proline-serine-threonin 23.6 1.6E+02 0.0053 19.4 5.1 27 49-75 22-48 (69)
172 4esr_A Jouberin; AHI-1, AHI1, 23.5 1.4E+02 0.0047 19.6 4.8 26 50-75 21-46 (69)
173 3oym_A PFV integrase, P42IN; p 23.4 1.1E+02 0.0037 26.9 5.3 52 52-107 318-378 (395)
174 1zuu_A BZZ1 protein; SH3 domai 23.4 1.4E+02 0.0048 18.8 4.7 26 50-75 16-42 (58)
175 2o9s_A Ponsin; SH3 domain, sig 23.4 1.1E+02 0.0037 20.1 4.2 29 49-77 20-48 (67)
176 3a98_A DOCK2, dedicator of cyt 23.2 87 0.003 25.4 4.4 26 49-75 31-56 (184)
177 4glm_A Dynamin-binding protein 23.1 1.1E+02 0.0039 20.1 4.3 27 49-75 27-53 (72)
178 2j6f_A CD2-associated protein; 23.1 1.5E+02 0.0051 19.1 4.8 26 50-75 16-42 (62)
179 1x2k_A OSTF1, osteoclast stimu 23.0 1.6E+02 0.0055 19.3 5.0 27 49-75 21-47 (68)
180 3thk_A Spectrin alpha chain, b 22.9 1.5E+02 0.0052 19.6 5.0 27 49-75 19-45 (73)
181 1ruw_A Myosin-3 isoform, MYO3; 22.9 1.2E+02 0.004 20.0 4.3 27 50-76 18-44 (69)
182 2dl5_A KIAA0769 protein; SH3 d 22.8 1.6E+02 0.0056 19.9 5.2 44 49-105 27-71 (78)
183 2dl3_A Sorbin and SH3 domain-c 22.7 1.4E+02 0.0049 19.4 4.7 43 49-105 21-63 (68)
184 2ydl_A SH3 domain-containing k 22.6 1.6E+02 0.0053 19.8 5.0 26 50-75 17-44 (69)
185 2jt4_A Cytoskeleton assembly c 22.4 1.7E+02 0.0057 19.2 5.1 27 49-75 20-47 (71)
186 2nwm_A Vinexin; cell adhesion; 21.9 1.1E+02 0.0039 20.2 4.1 26 50-75 16-41 (65)
187 2yuo_A CIP85, RUN and TBC1 dom 21.8 1.6E+02 0.0055 19.9 5.0 26 50-75 22-47 (78)
188 1x2p_A Protein arginine N-meth 21.6 1.8E+02 0.006 19.0 5.1 43 49-105 21-63 (68)
189 2eyx_A V-CRK sarcoma virus CT1 21.6 80 0.0027 20.9 3.2 25 51-75 24-48 (67)
190 1ib8_A Conserved protein SP14. 21.5 2.2E+02 0.0076 22.8 6.5 49 55-103 102-155 (164)
191 2rms_B MSIN3A-binding protein; 21.1 80 0.0027 21.7 3.0 16 2-17 9-24 (61)
192 4ag1_C Fynomer; hydrolase-de n 20.9 1.6E+02 0.0054 20.5 4.9 46 50-107 21-66 (84)
193 2jte_A CD2-associated protein; 20.8 1.8E+02 0.006 18.7 5.0 27 49-75 20-48 (64)
194 2gnc_A SLIT-ROBO RHO GTPase-ac 20.7 1.2E+02 0.0042 19.4 4.0 26 50-75 21-46 (60)
195 2ed0_A ABL interactor 2; coile 20.7 1.6E+02 0.0054 20.0 4.8 27 49-75 31-57 (78)
196 1oot_A Hypothetical 40.4 kDa p 20.5 1.7E+02 0.0059 18.5 5.0 27 49-75 17-45 (60)
197 2bzy_A CRK-like protein, CRKL 20.4 1.1E+02 0.0037 20.2 3.7 26 50-75 18-43 (67)
198 1csk_A C-SRC SH3 domain; phosp 20.3 1.7E+02 0.0059 19.3 4.8 26 49-74 25-51 (71)
199 2yt6_A Adult MALE urinary blad 20.3 2.4E+02 0.0084 20.1 6.9 47 49-107 41-87 (109)
200 2k9g_A SH3 domain-containing k 20.2 1.9E+02 0.0064 19.2 5.0 27 49-75 23-51 (73)
201 1tuc_A Alpha-spectrin; capping 20.1 1.3E+02 0.0044 19.6 4.0 24 51-74 5-28 (63)
No 1
>4a4f_A SurviVal of motor neuron-related-splicing factor; RNA binding protein; HET: 2MR; NMR {Homo sapiens} PDB: 4a4h_A*
Probab=99.82 E-value=1.9e-20 Score=134.99 Aligned_cols=58 Identities=36% Similarity=0.563 Sum_probs=53.1
Q ss_pred CCCCCCCCCCeEEEEecCCCCEEEEEEeeEeC--CeeEEEEecCCceEEEcCCCcccCCc
Q 025684 49 DNQEKLAVGTKVQAVYSEDGEWYDATIEAITP--NGYYVTYDSWGNKEEVDPANVRPVNL 106 (249)
Q Consensus 49 ~~~~~~kvGd~ClA~ys~Dg~wY~A~I~~i~~--~~~~V~F~~Ygn~E~V~~~~lrpl~~ 106 (249)
++...|++||.|+|+||+||+||||+|++|++ +.|.|.|+||||+|+|++++||||+.
T Consensus 4 ~~~~~~~vGd~c~A~~s~Dg~wYrA~I~~v~~~~~~~~V~fvdYGn~e~V~~~~Lrpl~~ 63 (64)
T 4a4f_A 4 QPTHSWKVGDKCMAVWSEDGQCYEAEIEEIDEENGTAAITFAGYGNAEVTPLLNLKPVEE 63 (64)
T ss_dssp CCSSCCCTTCEEEEECTTTSSEEEEEEEEEETTTTEEEEEETTTTEEEEEEGGGEECCSC
T ss_pred CcCCCCCCCCEEEEEECCCCCEEEEEEEEEcCCCCEEEEEEEecCCEEEEeHHHcEeCCC
Confidence 34578999999999999999999999999996 35999999999999999999999964
No 2
>1mhn_A SurviVal motor neuron protein; SMN, SMA, spinal muscular atrophy, RNA binding protein; 1.80A {Homo sapiens} SCOP: b.34.9.1 PDB: 4a4e_A* 4a4g_A*
Probab=99.82 E-value=1.8e-20 Score=132.89 Aligned_cols=55 Identities=35% Similarity=0.513 Sum_probs=51.5
Q ss_pred CCCCCCCeEEEEecCCCCEEEEEEeeEeC--CeeEEEEecCCceEEEcCCCcccCCc
Q 025684 52 EKLAVGTKVQAVYSEDGEWYDATIEAITP--NGYYVTYDSWGNKEEVDPANVRPVNL 106 (249)
Q Consensus 52 ~~~kvGd~ClA~ys~Dg~wY~A~I~~i~~--~~~~V~F~~Ygn~E~V~~~~lrpl~~ 106 (249)
..|++||.|+|+|++||.||||+|++|++ +.|.|.|+||||+|+|++++|||+++
T Consensus 2 ~~~~~G~~c~A~~s~Dg~wYrA~I~~i~~~~~~~~V~f~DYGn~e~v~~~~Lr~~~~ 58 (59)
T 1mhn_A 2 QQWKVGDKCSAIWSEDGCIYPATIASIDFKRETCVVVYTGYGNREEQNLSDLLSPIC 58 (59)
T ss_dssp CCCCTTCEEEEECTTTSCEEEEEEEEEETTTTEEEEEETTTTEEEEEEGGGCBCTTC
T ss_pred CcCCcCCEEEEEECCCCCEEEEEEEEEcCCCCEEEEEEEcCCCEEEEcHHHeeCCCC
Confidence 46999999999999999999999999986 46999999999999999999999974
No 3
>1g5v_A SurviVal motor neuron protein 1; mRNA processing, translation; NMR {Homo sapiens} SCOP: b.34.9.1
Probab=99.81 E-value=3.3e-20 Score=141.95 Aligned_cols=58 Identities=33% Similarity=0.466 Sum_probs=51.6
Q ss_pred CCCCCCCCCeEEEEecCCCCEEEEEEeeEeC--CeeEEEEecCCceEEEcCCCcccCCch
Q 025684 50 NQEKLAVGTKVQAVYSEDGEWYDATIEAITP--NGYYVTYDSWGNKEEVDPANVRPVNLL 107 (249)
Q Consensus 50 ~~~~~kvGd~ClA~ys~Dg~wY~A~I~~i~~--~~~~V~F~~Ygn~E~V~~~~lrpl~~l 107 (249)
+...|++||.|+|+|++||+||||+|++|++ +.|.|.|+||||+|+|++++|||++..
T Consensus 7 ~~~~~kvGd~C~A~ys~Dg~wYrA~I~~i~~~~~~~~V~fiDYGN~E~V~~~~Lrp~~~~ 66 (88)
T 1g5v_A 7 SLQQWKVGDKCSAIWSEDGCIYPATIASIDFKRETCVVVYTGYGNREEQNLSDLLSPICE 66 (88)
T ss_dssp --CCCCSSCEEEEECTTTCCEEEEEEEEEETTTTEEEEEETTTCCEEEEEGGGCBCCC--
T ss_pred ccCCCCCCCEEEEEECCCCCEEEEEEEEecCCCCEEEEEEecCCCEEEEcHHHcccCChh
Confidence 3468999999999999999999999999996 569999999999999999999999753
No 4
>3s6w_A Tudor domain-containing protein 3; methylated arginine recognize, ISO-propanol, transcri; 1.78A {Homo sapiens} PDB: 3pmt_A*
Probab=99.81 E-value=2.8e-20 Score=129.50 Aligned_cols=52 Identities=33% Similarity=0.544 Sum_probs=47.4
Q ss_pred CCCCCCeEEEEecCCCCEEEEEEeeEeCC--eeEEEEecCCceEEEcCCCcccC
Q 025684 53 KLAVGTKVQAVYSEDGEWYDATIEAITPN--GYYVTYDSWGNKEEVDPANVRPV 104 (249)
Q Consensus 53 ~~kvGd~ClA~ys~Dg~wY~A~I~~i~~~--~~~V~F~~Ygn~E~V~~~~lrpl 104 (249)
.|++||.|+|+|++||+||||+|++|.++ .+.|.|+||||+|+|++++||||
T Consensus 1 ~wk~G~~c~A~~s~Dg~wYrA~I~~i~~~~~~~~V~fvDYGn~e~v~~~~lrpi 54 (54)
T 3s6w_A 1 MWKPGDECFALYWEDNKFYRAEVEALHSSGMTAVVKFIDYGNYEEVLLSNIKPI 54 (54)
T ss_dssp CCCTTCEEEEEETTTTEEEEEEEEEC--CCSEEEEEETTTCCEEEEEGGGEECC
T ss_pred CCCCCCEEEEEECCCCCEEEEEEEEEeCCCCEEEEEEEccCCeEEEeHHHEEEC
Confidence 49999999999999999999999999753 58999999999999999999996
No 5
>3pnw_C Tudor domain-containing protein 3; FAB, structural genomics consortium, antibody, SGC, protein immune system complex; 2.05A {Homo sapiens}
Probab=99.76 E-value=6.3e-19 Score=131.59 Aligned_cols=56 Identities=30% Similarity=0.508 Sum_probs=50.7
Q ss_pred CCCCCCCCeEEEEecCCCCEEEEEEeeEeCC--eeEEEEecCCceEEEcCCCcccCCc
Q 025684 51 QEKLAVGTKVQAVYSEDGEWYDATIEAITPN--GYYVTYDSWGNKEEVDPANVRPVNL 106 (249)
Q Consensus 51 ~~~~kvGd~ClA~ys~Dg~wY~A~I~~i~~~--~~~V~F~~Ygn~E~V~~~~lrpl~~ 106 (249)
...|++||.|+|+||.||.||||+|++|.++ .|.|.|+||||+++|++++||||+.
T Consensus 15 ~~~~kvGd~C~A~ys~Dg~wYRA~I~~i~~~~~~~~V~fvDYGN~e~V~~~~Lr~l~~ 72 (77)
T 3pnw_C 15 AKMWKPGDECFALYWEDNKFYRAEVEALHSSGMTAVVKFIDYGNYEEVLLSNIKPIQT 72 (77)
T ss_dssp HTTCCTTCEEEEEETTTTEEEEEEEEEECTTSSEEEEEETTTCCEEEEEGGGEECC--
T ss_pred cCCCCcCCEEEEEECCCCCEEEEEEEEEeCCCCEEEEEEEcCCCeEEEeHHHeEECCh
Confidence 3679999999999999999999999999854 4899999999999999999999974
No 6
>2d9t_A Tudor domain-containing protein 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.34.9.1
Probab=99.76 E-value=1.1e-18 Score=130.38 Aligned_cols=56 Identities=32% Similarity=0.507 Sum_probs=52.1
Q ss_pred CCCCCCCCeEEEEecCCCCEEEEEEeeEeC--CeeEEEEecCCceEEEcCCCcccCCc
Q 025684 51 QEKLAVGTKVQAVYSEDGEWYDATIEAITP--NGYYVTYDSWGNKEEVDPANVRPVNL 106 (249)
Q Consensus 51 ~~~~kvGd~ClA~ys~Dg~wY~A~I~~i~~--~~~~V~F~~Ygn~E~V~~~~lrpl~~ 106 (249)
...|++|+.|+|+|++||+||||+|++|.. +.|.|.|+||||+|+|++++||||+.
T Consensus 7 ~~~~~~G~~c~A~~s~Dg~wYRA~I~~i~~~~~~~~V~fiDYGN~e~V~~~~Lr~l~~ 64 (78)
T 2d9t_A 7 GKVWKPGDECFALYWEDNKFYRAEVEALHSSGMTAVVKFTDYGNYEEVLLSNIKPVQT 64 (78)
T ss_dssp CCCCCTTCEEEEECTTTCCEEEEEEEEECSSSSEEEEEETTTTEEEEEEGGGEEECCC
T ss_pred ccCCCcCCEEEEEECCCCCEEEEEEEEEeCCCCEEEEEEEcCCCeEEEcHHHeEeCCH
Confidence 367999999999999999999999999986 45999999999999999999999974
No 7
>2equ_A PHD finger protein 20-like 1; tudor domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.73 E-value=6.8e-18 Score=125.28 Aligned_cols=54 Identities=20% Similarity=0.296 Sum_probs=50.5
Q ss_pred CCCCCCCCeEEEEecCCCCEEEEEEeeEeCC-eeEEEEecCCceEEEcCCCcccCCc
Q 025684 51 QEKLAVGTKVQAVYSEDGEWYDATIEAITPN-GYYVTYDSWGNKEEVDPANVRPVNL 106 (249)
Q Consensus 51 ~~~~kvGd~ClA~ys~Dg~wY~A~I~~i~~~-~~~V~F~~Ygn~E~V~~~~lrpl~~ 106 (249)
...|++||.|+|+|+ ||+||+|+|++|+++ .|.|.|+|| |.|+|+.++|||||.
T Consensus 7 ~~~~kvGd~clA~ws-Dg~~Y~A~I~~v~~~~~~~V~f~Dy-n~e~v~~~~lrplp~ 61 (74)
T 2equ_A 7 GFDFKAGEEVLARWT-DCRYYPAKIEAINKEGTFTVQFYDG-VIRCLKRMHIKAMPE 61 (74)
T ss_dssp CCCCCTTCEEEEECS-SSSEEEEEEEEESTTSSEEEEETTS-CEEEECGGGEECCCG
T ss_pred CCCCCCCCEEEEECC-CCCEEEEEEEEECCCCEEEEEEecC-CeEEecHHHCeeCCh
Confidence 368999999999999 999999999999974 599999999 999999999999985
No 8
>3fdr_A Tudor and KH domain-containing protein; TDRD2, structural genomics, structural genomics consortium, SGC, alternative splicing, RNA-binding; 1.75A {Homo sapiens} SCOP: b.34.9.1
Probab=99.65 E-value=4.2e-16 Score=119.09 Aligned_cols=55 Identities=20% Similarity=0.403 Sum_probs=51.6
Q ss_pred CCCCCCCeEEEEecCCCCEEEEEEeeEeCC-eeEEEEecCCceEEEcCCCcccCCc
Q 025684 52 EKLAVGTKVQAVYSEDGEWYDATIEAITPN-GYYVTYDSWGNKEEVDPANVRPVNL 106 (249)
Q Consensus 52 ~~~kvGd~ClA~ys~Dg~wY~A~I~~i~~~-~~~V~F~~Ygn~E~V~~~~lrpl~~ 106 (249)
..|++|+.|+|+|++||.||||+|.+|.++ .+.|.|+||||.++|++++||+|+.
T Consensus 26 ~~~~~G~~c~a~~~~d~~wyRA~I~~~~~~~~~~V~fvDyGn~e~v~~~~lr~l~~ 81 (94)
T 3fdr_A 26 LTVHVGDIVAAPLPTNGSWYRARVLGTLENGNLDLYFVDFGDNGDCPLKDLRALRS 81 (94)
T ss_dssp CCCCTTCEEEEEETTTTEEEEEEEEEECTTSCEEEEETTTCCEEEECGGGCEECCG
T ss_pred CCCCCCCEEEEEECCCCeEEEEEEEEECCCCeEEEEEEcCCCeEEEEHHHhhhcCH
Confidence 579999999999999999999999999875 5999999999999999999999974
No 9
>2ldm_A Uncharacterized protein; PHF20, tudor domain, epigenetics, methylated P53, transcript factor, transcription-protein binding complex; HET: M2L; NMR {Homo sapiens}
Probab=99.45 E-value=1.2e-17 Score=125.80 Aligned_cols=54 Identities=22% Similarity=0.414 Sum_probs=49.9
Q ss_pred CCCCCCCeEEEEecCCCCEEEEEEeeEeCC-eeEEEEecCCceEEEcCCCcccCCch
Q 025684 52 EKLAVGTKVQAVYSEDGEWYDATIEAITPN-GYYVTYDSWGNKEEVDPANVRPVNLL 107 (249)
Q Consensus 52 ~~~kvGd~ClA~ys~Dg~wY~A~I~~i~~~-~~~V~F~~Ygn~E~V~~~~lrpl~~l 107 (249)
..|++||.|+|+|+ ||+||+|+|++|+++ .|.|.|+| ||.|+|++++|||++.-
T Consensus 5 ~~~kvGd~clAkws-Dg~wY~A~I~~v~~~~~y~V~F~D-Gn~E~V~~s~LrPl~~~ 59 (81)
T 2ldm_A 5 SEFQINEQVLASWS-DSRFYPAKVTAVNKDGTYTVKFYD-GVVQTVKHIHVKAFSKD 59 (81)
Confidence 47999999999999 999999999999864 59999999 99999999999999753
No 10
>3p8d_A Medulloblastoma antigen MU-MB-50.72; tudor domain, lysine-methylated P53 binding, histone binding binding; 2.00A {Homo sapiens}
Probab=99.61 E-value=6.9e-16 Score=112.34 Aligned_cols=53 Identities=21% Similarity=0.425 Sum_probs=49.3
Q ss_pred CCCCCCCeEEEEecCCCCEEEEEEeeEeCC-eeEEEEecCCceEEEcCCCcccCCc
Q 025684 52 EKLAVGTKVQAVYSEDGEWYDATIEAITPN-GYYVTYDSWGNKEEVDPANVRPVNL 106 (249)
Q Consensus 52 ~~~kvGd~ClA~ys~Dg~wY~A~I~~i~~~-~~~V~F~~Ygn~E~V~~~~lrpl~~ 106 (249)
..|++||.|||+| .||+||+|+|++|.++ .|+|+|.| |++++|...+|+|++.
T Consensus 5 ~~~~vGd~vmArW-~D~~yYpA~I~si~~~~~Y~V~F~d-G~~etvk~~~ikp~~~ 58 (67)
T 3p8d_A 5 SEFQINEQVLACW-SDCRFYPAKVTAVNKDGTYTVKFYD-GVVQTVKHIHVKAFSK 58 (67)
T ss_dssp CCCCTTCEEEEEC-TTSCEEEEEEEEECTTSEEEEEETT-SCEEEEEGGGEEECC-
T ss_pred cccccCCEEEEEc-CCCCEeeEEEEEECCCCeEEEEEeC-CceEEEeHHHcccCCc
Confidence 3799999999999 7999999999999987 49999999 9999999999999985
No 11
>3qii_A PHD finger protein 20; tudor domain, structural genomics, structural GE consortium, SGC, transcription regulator; 2.30A {Homo sapiens}
Probab=99.59 E-value=1.2e-15 Score=115.61 Aligned_cols=54 Identities=22% Similarity=0.466 Sum_probs=49.1
Q ss_pred CCCCCCCCeEEEEecCCCCEEEEEEeeEeCCe-eEEEEecCCceEEEcCCCcccCCc
Q 025684 51 QEKLAVGTKVQAVYSEDGEWYDATIEAITPNG-YYVTYDSWGNKEEVDPANVRPVNL 106 (249)
Q Consensus 51 ~~~~kvGd~ClA~ys~Dg~wY~A~I~~i~~~~-~~V~F~~Ygn~E~V~~~~lrpl~~ 106 (249)
...|++||.|||+| .||+||+|+|++|.+++ |+|.|.| |++++|...+|+|++.
T Consensus 19 ~~~f~vGd~VlArW-~D~~yYPAkI~sV~~~~~YtV~F~D-G~~etvk~~~IKp~~~ 73 (85)
T 3qii_A 19 SSEFQINEQVLACW-SDCRFYPAKVTAVNKDGTYTVKFYD-GVVQTVKHIHVKAFSK 73 (85)
T ss_dssp --CCCTTCEEEEEC-TTSCEEEEEEEEECTTSEEEEEETT-SCEEEEEGGGEEECC-
T ss_pred CcccccCCEEEEEe-CCCCEeeEEEEEECCCCeEEEEEeC-CCeEEecHHHcccCCh
Confidence 36899999999999 79999999999999874 9999999 9999999999999985
No 12
>2diq_A Tudor and KH domain-containing protein; tudor domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.34.9.1
Probab=99.58 E-value=2.1e-15 Score=118.48 Aligned_cols=55 Identities=18% Similarity=0.382 Sum_probs=51.5
Q ss_pred CCCCCCCeEEEEecCCCCEEEEEEeeEeC-CeeEEEEecCCceEEEcCCCcccCCc
Q 025684 52 EKLAVGTKVQAVYSEDGEWYDATIEAITP-NGYYVTYDSWGNKEEVDPANVRPVNL 106 (249)
Q Consensus 52 ~~~kvGd~ClA~ys~Dg~wY~A~I~~i~~-~~~~V~F~~Ygn~E~V~~~~lrpl~~ 106 (249)
..|++|+.|+|+|++||.||||+|.+|.+ +.+.|.|+||||.++|++++||+|+.
T Consensus 31 ~~~~~G~~c~a~~~~d~~wyRA~V~~~~~~~~~~V~fvDyGn~e~v~~~~Lr~l~~ 86 (110)
T 2diq_A 31 LTVHVGDIVAAPLPTNGSWYRARVLGTLENGNLDLYFVDFGDNGDCPLKDLRALRS 86 (110)
T ss_dssp CCCCTTCEEEECCTTTCSCEEEEECCCCSSSCEEEEETTTCCEEEECGGGCEECCH
T ss_pred CCCCCCCEEEEEECCCCeEEEEEEEEECCCCeEEEEEEeCCCeEEEehHHhhcCcH
Confidence 57999999999999999999999999987 46999999999999999999999974
No 13
>2eqk_A Tudor domain-containing protein 4; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.54 E-value=1.4e-14 Score=109.81 Aligned_cols=56 Identities=13% Similarity=0.122 Sum_probs=52.3
Q ss_pred CCCCCCCCeEEEEecCCCCEEEEEEeeEeCCe-eEEEEecCCceEEEcCCCcccCCc
Q 025684 51 QEKLAVGTKVQAVYSEDGEWYDATIEAITPNG-YYVTYDSWGNKEEVDPANVRPVNL 106 (249)
Q Consensus 51 ~~~~kvGd~ClA~ys~Dg~wY~A~I~~i~~~~-~~V~F~~Ygn~E~V~~~~lrpl~~ 106 (249)
...|++|+.|.|+|++|++||||+|.++..++ +.|.|+||||.++|+.++||||++
T Consensus 19 ~~~~k~g~~vaak~~d~n~WyRakV~~v~~~~~veVl~~DyGn~~~V~~~~LR~L~~ 75 (85)
T 2eqk_A 19 PVKWENDMHCAVKIQDKNQWRRGQIIRMVTDTLVEVLLYDVGVELVVNVDCLRKLEE 75 (85)
T ss_dssp CCCCCSSCEEEEECSSSCCEEEEEEEEECSSSEEEEECTTTCCEEEEETTTEEECCH
T ss_pred ccCccCCCEEEEEeCCCCeEEEEEEEEecCCCeEEEEEEccCCEEEEEccccccCCH
Confidence 47899999999999999999999999999754 899999999999999999999964
No 14
>2l8d_A Lamin-B receptor; DNA binding protein; NMR {Gallus gallus}
Probab=99.43 E-value=2.3e-13 Score=97.66 Aligned_cols=55 Identities=18% Similarity=0.316 Sum_probs=50.9
Q ss_pred CCCCCCCCeEEEEecCCCCEEEEEEeeEeCC--eeEEEEecCCceEEEcCCCcccCCc
Q 025684 51 QEKLAVGTKVQAVYSEDGEWYDATIEAITPN--GYYVTYDSWGNKEEVDPANVRPVNL 106 (249)
Q Consensus 51 ~~~~kvGd~ClA~ys~Dg~wY~A~I~~i~~~--~~~V~F~~Ygn~E~V~~~~lrpl~~ 106 (249)
...|.+||.+||+|++|+.||+|+|++|+.. .|.|.|.+ |++|++...+|||++.
T Consensus 7 ~~~~~vgd~VmaRW~Gd~~yYparI~Si~s~~~~Y~V~fKd-gT~e~L~~kDIkp~~s 63 (66)
T 2l8d_A 7 NRKYADGEVVMGRWPGSVLYYEVQVTSYDDASHLYTVKYKD-GTELALKESDIRLQSS 63 (66)
T ss_dssp SSSSCSSCEEEEECTTSSCEEEEEEEEEETTTTEEEEEETT-SCEEEEEGGGEECSSS
T ss_pred ceEeecCCEEEEEcCCCccceEEEEEEeccCCceEEEEecC-CCEEeechhccccchh
Confidence 4689999999999999999999999999964 49999999 9999999999999954
No 15
>2dig_A Lamin-B receptor; tudor domain, integral nuclear envelope inner membrane protein, nuclear protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.34.9.1
Probab=99.40 E-value=5.7e-13 Score=95.88 Aligned_cols=56 Identities=20% Similarity=0.338 Sum_probs=51.6
Q ss_pred CCCCCCCCCeEEEEecCCCCEEEEEEeeEeCC--eeEEEEecCCceEEEcCCCcccCCc
Q 025684 50 NQEKLAVGTKVQAVYSEDGEWYDATIEAITPN--GYYVTYDSWGNKEEVDPANVRPVNL 106 (249)
Q Consensus 50 ~~~~~kvGd~ClA~ys~Dg~wY~A~I~~i~~~--~~~V~F~~Ygn~E~V~~~~lrpl~~ 106 (249)
+...|.+||.+||+|.+|+.||+|+|++|+.. .|.|.|.+ |++|++...+|||+|.
T Consensus 9 p~~~f~vgd~VmaRW~Gd~~yYparItSits~~~~Y~VkfKd-gT~e~L~~kDIKp~~~ 66 (68)
T 2dig_A 9 PSRKFADGEVVRGRWPGSSLYYEVEILSHDSTSQLYTVKYKD-GTELELKENDIKSGPS 66 (68)
T ss_dssp CCCSSCSSCEEEEECTTTCCEEEEEEEEEETTTTEEEEECTT-SCEEEEETTTEECCCC
T ss_pred CceEeecCCEEEEEccCCccceEEEEEEeccCCceEEEEecC-CCEEEechhccccCCC
Confidence 34689999999999999999999999999954 49999999 9999999999999974
No 16
>3ntk_A Maternal protein tudor; tudor domain, OB-fold, GERM cell formation, transcription; 1.80A {Drosophila melanogaster} PDB: 3nth_A* 3nti_A*
Probab=99.40 E-value=3.8e-13 Score=112.79 Aligned_cols=53 Identities=25% Similarity=0.399 Sum_probs=48.9
Q ss_pred CCCCCCCeEEEEecCCCCEEEEEEeeEeCCe-eEEEEecCCceEEEcCCCcccCCc
Q 025684 52 EKLAVGTKVQAVYSEDGEWYDATIEAITPNG-YYVTYDSWGNKEEVDPANVRPVNL 106 (249)
Q Consensus 52 ~~~kvGd~ClA~ys~Dg~wY~A~I~~i~~~~-~~V~F~~Ygn~E~V~~~~lrpl~~ 106 (249)
..|++|+.|+|+|+.||.||||+|.++.+++ +.|.|+||||++.+ ++||+|+.
T Consensus 46 ~~~~~G~~c~A~~~~d~~wyRa~I~~~~~~~~~~V~fvDyGn~~~v--~~lr~l~~ 99 (169)
T 3ntk_A 46 SDLKEGALCVAQFPEDEVFYRAQIRKVLDDGKCEVHFIDFGNNAVT--QQFRQLPE 99 (169)
T ss_dssp CCCCTTCEEEEEETTTTEEEEEEEEEECSTTCEEEEETTTTEEEEE--SCEECCCH
T ss_pred CCCCCCCEEEEEECCCCcEEEEEEEEECCCCEEEEEEEecCCeEEh--hhhhccCH
Confidence 4799999999999999999999999999765 99999999999985 89999974
No 17
>4b9w_A TDRD1, tudor domain-containing protein 1; replication; HET: 2MR; 2.10A {Mus musculus}
Probab=99.38 E-value=5.5e-13 Score=114.35 Aligned_cols=55 Identities=31% Similarity=0.561 Sum_probs=50.9
Q ss_pred CCCCCCCeEEEEecCCCCEEEEEEeeEeCC-eeEEEEecCCceEEEcCCCcccCCc
Q 025684 52 EKLAVGTKVQAVYSEDGEWYDATIEAITPN-GYYVTYDSWGNKEEVDPANVRPVNL 106 (249)
Q Consensus 52 ~~~kvGd~ClA~ys~Dg~wY~A~I~~i~~~-~~~V~F~~Ygn~E~V~~~~lrpl~~ 106 (249)
..+++|+.|+|+|+.||.||||+|.++.++ .+.|.|+||||++.|+.++||+|++
T Consensus 64 ~~~~~G~~c~a~~~~d~~wyRa~V~~~~~~~~~~V~~vDyG~~~~v~~~~l~~l~~ 119 (201)
T 4b9w_A 64 FKAEIGRPCCAFFSGDGNWYRALVKEILPSGNVKVHFVDYGNVEEVTTDQLQAILP 119 (201)
T ss_dssp CCCCTTCEEEEEETTTTEEEEEEEEEECTTSCEEEEETTTCCEEEECGGGEEECCG
T ss_pred CCCCCCCEEEEEECCCCeEEEEEEEEECCCCeEEEEEEccCCEEEEEHHHhccChH
Confidence 457899999999999999999999999866 4899999999999999999999974
No 18
>2wac_A CG7008-PA; unknown function, tudor, beta-barrel, nuclease domain, tudor P100, SND1, methylated arginine, SDMA, splicing; 2.10A {Drosophila melanogaster}
Probab=99.37 E-value=6.9e-13 Score=113.46 Aligned_cols=55 Identities=25% Similarity=0.425 Sum_probs=52.1
Q ss_pred CCCCCCCeEEEEecCCCCEEEEEEeeEeCCeeEEEEecCCceEEEcCCCcccCCc
Q 025684 52 EKLAVGTKVQAVYSEDGEWYDATIEAITPNGYYVTYDSWGNKEEVDPANVRPVNL 106 (249)
Q Consensus 52 ~~~kvGd~ClA~ys~Dg~wY~A~I~~i~~~~~~V~F~~Ygn~E~V~~~~lrpl~~ 106 (249)
..|++|+.|+|+|++||.||||+|++|.++.+.|.|+||||++.|+.++||+|++
T Consensus 50 ~~~~~g~~c~a~~~~d~~wyRa~V~~v~~~~~~V~~vDyG~~~~v~~~~l~~l~~ 104 (218)
T 2wac_A 50 YTPKRGDLVAAQFTLDNQWYRAKVERVQGSNATVLYIDYGNKETLPTNRLAALPP 104 (218)
T ss_dssp CCCCTTCEEEEECTTTCCEEEEEEEEEETTEEEEEETTTCCEEEEEGGGEEECCG
T ss_pred ccCCcCCEEEEEECCCCeEEEEEEEEecCCeEEEEEEecCCeEEEchHHcccCCh
Confidence 4689999999999999999999999999888999999999999999999999974
No 19
>4b9x_A TDRD1, tudor domain-containing protein 1; replication; 2.80A {Mus musculus}
Probab=99.35 E-value=8e-13 Score=115.36 Aligned_cols=55 Identities=31% Similarity=0.561 Sum_probs=50.8
Q ss_pred CCCCCCCeEEEEecCCCCEEEEEEeeEeCC-eeEEEEecCCceEEEcCCCcccCCc
Q 025684 52 EKLAVGTKVQAVYSEDGEWYDATIEAITPN-GYYVTYDSWGNKEEVDPANVRPVNL 106 (249)
Q Consensus 52 ~~~kvGd~ClA~ys~Dg~wY~A~I~~i~~~-~~~V~F~~Ygn~E~V~~~~lrpl~~ 106 (249)
..+++|+.|+|+|+.||.||||+|.++.++ .+.|.|+||||++.|+.++||+|+.
T Consensus 64 ~~~~~G~~c~a~~~~d~~WyRa~V~~~~~~~~~~V~~vDyGn~~~v~~~~l~~l~~ 119 (226)
T 4b9x_A 64 FKAEIGRPCCAFFSGDGNWYRALVKEILPSGNVKVHFVDYGNVEEVTTDQLQAILP 119 (226)
T ss_dssp CCCCTTCEEEEEETTTTEEEEEEEEEECSSSEEEEECTTTCCEEEEEGGGEECCCG
T ss_pred CCCCCCCEEEEEECCCCeEEEEEEEEECCCCeEEEEEEecCCEEEEEHHHhccChH
Confidence 457899999999999999999999999866 4899999999999999999999974
No 20
>2hqx_A P100 CO-activator tudor domain; human P100 tudor domain, proteolytic fragment, PSI, structural genomics; 1.42A {Homo sapiens} SCOP: b.34.9.1 PDB: 2hqe_A 3omc_A* 3omg_A* 2o4x_A 2e6n_A 2o4x_B
Probab=99.29 E-value=3.7e-12 Score=111.70 Aligned_cols=54 Identities=28% Similarity=0.481 Sum_probs=50.3
Q ss_pred CCCCCCCeEEEEecCCCCEEEEEEeeEe-CCeeEEEEecCCceEEEcCCCcccCCc
Q 025684 52 EKLAVGTKVQAVYSEDGEWYDATIEAIT-PNGYYVTYDSWGNKEEVDPANVRPVNL 106 (249)
Q Consensus 52 ~~~kvGd~ClA~ys~Dg~wY~A~I~~i~-~~~~~V~F~~Ygn~E~V~~~~lrpl~~ 106 (249)
..|++|+.|+|+|+ ||.||||+|.+|. ++.+.|.|+||||++.|+.++||+|+.
T Consensus 64 ~~~~~G~~c~a~~~-d~~wyRa~V~~~~~~~~~~V~~vDyGn~~~v~~~~lr~l~~ 118 (246)
T 2hqx_A 64 YAPRRGEFCIAKFV-DGEWYRARVEKVESPAKIHVFYIDYGNREVLPSTRLGTLSP 118 (246)
T ss_dssp CCCCTTCEEEEECT-TSCEEEEEEEEEEETTEEEEEETTTCCEEEECGGGEECCCG
T ss_pred CCCCCCCEEEEEcC-CCCEEEEEEEEEcCCCeEEEEEEeCCCeEEEeHHHhhcCCH
Confidence 57899999999999 9999999999998 467999999999999999999999974
No 21
>3bdl_A Staphylococcal nuclease domain-containing protein 1; staphylococcal nuclease OB fold, tudor domain, cytoplasm, HOST-virus interaction, nucleus; HET: CIT; 1.90A {Homo sapiens}
Probab=99.10 E-value=7.1e-11 Score=115.60 Aligned_cols=54 Identities=26% Similarity=0.437 Sum_probs=50.6
Q ss_pred CCCCCCCeEEEEecCCCCEEEEEEeeEeC-CeeEEEEecCCceEEEcCCCcccCCc
Q 025684 52 EKLAVGTKVQAVYSEDGEWYDATIEAITP-NGYYVTYDSWGNKEEVDPANVRPVNL 106 (249)
Q Consensus 52 ~~~kvGd~ClA~ys~Dg~wY~A~I~~i~~-~~~~V~F~~Ygn~E~V~~~~lrpl~~ 106 (249)
..|++|+.|+|+|+ ||.||||+|.+|.+ +.|.|.|+||||+++|++++||+|+.
T Consensus 410 ~~~~~G~~c~a~~~-d~~wyRa~I~~v~~~~~~~V~fvDyGn~e~v~~~~Lr~l~~ 464 (570)
T 3bdl_A 410 YAPRRGEFCIAKFV-DGEWYRARVEKVESPAKIHVFYIDYGNREVLPSTRLGTLSP 464 (570)
T ss_dssp CCCCTTCEEEEECT-TSCEEEEEEEEEEETTEEEEEETTTCCEEEECGGGEECCCG
T ss_pred cCCCcCCEEEEEEC-CCCEEEEEEEEEcCCCeEEEEEEeCCCeEEEEHHHCccCCH
Confidence 46899999999999 99999999999997 56999999999999999999999974
No 22
>2eqj_A Metal-response element-binding transcription factor 2; structure genomics,tudor domain, zinc-regulated factor 1, ZIRF1; NMR {Mus musculus}
Probab=98.81 E-value=1.4e-08 Score=73.23 Aligned_cols=53 Identities=25% Similarity=0.324 Sum_probs=44.6
Q ss_pred CCCCCCCCCeEEEEecCCCCEEEEEEeeEeCC--eeEEEEecCCceEEEcCCCcccC
Q 025684 50 NQEKLAVGTKVQAVYSEDGEWYDATIEAITPN--GYYVTYDSWGNKEEVDPANVRPV 104 (249)
Q Consensus 50 ~~~~~kvGd~ClA~ys~Dg~wY~A~I~~i~~~--~~~V~F~~Ygn~E~V~~~~lrpl 104 (249)
....|++|+.|+|.|+ ||.+|+|+|.+|..+ .|.|.|.| |..-.|...+|.+-
T Consensus 10 ~~~~f~vGddVLA~wt-DGl~Y~gtI~~V~~~~gtC~V~F~D-~s~~w~~~kdi~~~ 64 (66)
T 2eqj_A 10 PACKFEEGQDVLARWS-DGLFYLGTIKKINILKQSCFIIFED-SSKSWVLWKDIQTG 64 (66)
T ss_dssp CCCCSCTTCEEEEECT-TSCEEEEEEEEEETTTTEEEEEETT-TEEEEEETTTEECC
T ss_pred ccccccCCCEEEEEEc-cCcEEEeEEEEEccCCcEEEEEEcc-CCEEEEEeeccccc
Confidence 3467999999999996 999999999999974 49999987 56677877777754
No 23
>4hcz_A PHD finger protein 1; protein-peptide complex, tudor, histone binding, H3K36ME3, N nucleus, transcription; HET: M3L; 1.85A {Homo sapiens}
Probab=98.61 E-value=9e-08 Score=67.22 Aligned_cols=51 Identities=24% Similarity=0.321 Sum_probs=45.3
Q ss_pred CCCCCCeEEEEecCCCCEEEEEEeeEeCC--eeEEEEecCCceEEEcCCCcccCC
Q 025684 53 KLAVGTKVQAVYSEDGEWYDATIEAITPN--GYYVTYDSWGNKEEVDPANVRPVN 105 (249)
Q Consensus 53 ~~kvGd~ClA~ys~Dg~wY~A~I~~i~~~--~~~V~F~~Ygn~E~V~~~~lrpl~ 105 (249)
.+.+|+.++|+|+ ||.||.++|.+|... .|.|.|.| +..-.|...+|+++.
T Consensus 3 ~f~~GedVLarws-DG~fYlGtI~~V~~~~~~clV~F~D-~s~~W~~~kdi~~~~ 55 (58)
T 4hcz_A 3 RLWEGQDVLARWT-DGLLYLGTIKKVDSAREVCLVQFED-DSQFLVLWKDISPAA 55 (58)
T ss_dssp SCCTTCEEEEECT-TSCEEEEEEEEEETTTTEEEEEETT-SCEEEEEGGGEEECS
T ss_pred ccccCCEEEEEec-CCCEEeEEEEEEecCCCEEEEEEcC-CCeEEEEhHHccccc
Confidence 5899999999998 999999999999965 59999988 777889888888763
No 24
>2xk0_A Polycomb protein PCL; transcription, aromatic CAGE; NMR {Drosophila melanogaster}
Probab=98.50 E-value=4.5e-07 Score=65.67 Aligned_cols=52 Identities=23% Similarity=0.413 Sum_probs=46.4
Q ss_pred CCCCCCCeEEEEecCCCCEEEEEEeeEeCCeeEEEEecCCceEEEcCCCcccCC
Q 025684 52 EKLAVGTKVQAVYSEDGEWYDATIEAITPNGYYVTYDSWGNKEEVDPANVRPVN 105 (249)
Q Consensus 52 ~~~kvGd~ClA~ys~Dg~wY~A~I~~i~~~~~~V~F~~Ygn~E~V~~~~lrpl~ 105 (249)
..|.+|+.|+|+|+ ||.||-++|.+.....|.|.|.| ...-.|.+.+|+.+.
T Consensus 14 ~~~~~geDVL~rw~-DG~fYLGtIVd~~~~~ClV~FeD-~S~~Wv~~kdi~kl~ 65 (69)
T 2xk0_A 14 VTYALQEDVFIKCN-DGRFYLGTIIDQTSDQYLIRFDD-QSEQWCEPDKLRKLG 65 (69)
T ss_dssp CCCCTTCEEEEECT-TSCEEEEEEEEECSSCEEEEETT-CCEEEECTTTEECSS
T ss_pred cccccCCeEEEEec-CCCEEEEEEEecCCceEEEEecC-CcceeeeHHHHHhhc
Confidence 78999999999998 99999999977777789999998 667889999999874
No 25
>2e5p_A Protein PHF1, PHD finger protein 1; tudor domain, PHF1 protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.44 E-value=6.1e-07 Score=64.62 Aligned_cols=52 Identities=23% Similarity=0.312 Sum_probs=45.5
Q ss_pred CCCCCCCeEEEEecCCCCEEEEEEeeEeCC--eeEEEEecCCceEEEcCCCcccCC
Q 025684 52 EKLAVGTKVQAVYSEDGEWYDATIEAITPN--GYYVTYDSWGNKEEVDPANVRPVN 105 (249)
Q Consensus 52 ~~~kvGd~ClA~ys~Dg~wY~A~I~~i~~~--~~~V~F~~Ygn~E~V~~~~lrpl~ 105 (249)
..|.+|+.+||+|+ ||.||.++|..|+.. .|.|.|.| +..-.|...+|.++.
T Consensus 8 ~~f~eGqdVLarWs-DGlfYlGtV~kV~~~~~~ClV~FeD-~s~~wv~~kdi~~~~ 61 (68)
T 2e5p_A 8 PRLWEGQDVLARWT-DGLLYLGTIKKVDSAREVCLVQFED-DSQFLVLWKDISPAA 61 (68)
T ss_dssp CCCCTTCEEEEECT-TSSEEEEEEEEEETTTTEEEEEETT-TEEEEEETTTEECCC
T ss_pred cccccCCEEEEEec-CCcEEEeEEEEEecCCcEEEEEEcc-CCeeeeeeecccccc
Confidence 57999999999998 999999999999964 49999987 666788889998874
No 26
>2e5q_A PHD finger protein 19; tudor domain, isoform B, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.40 E-value=4.3e-07 Score=64.51 Aligned_cols=51 Identities=22% Similarity=0.335 Sum_probs=44.1
Q ss_pred CCCCCCCeEEEEecCCCCEEEEEEeeEeCC--eeEEEEecCCceEEEcCCCcccC
Q 025684 52 EKLAVGTKVQAVYSEDGEWYDATIEAITPN--GYYVTYDSWGNKEEVDPANVRPV 104 (249)
Q Consensus 52 ~~~kvGd~ClA~ys~Dg~wY~A~I~~i~~~--~~~V~F~~Ygn~E~V~~~~lrpl 104 (249)
..|.+|+.+||.|+ ||.||.++|..|+.. .|.|.|.| +..-.|...+|+++
T Consensus 6 ~~f~eGqdVLarWs-DGlfYlgtV~kV~~~~~~ClV~FeD-~s~~wv~~kdi~~~ 58 (63)
T 2e5q_A 6 SGLTEGQYVLCRWT-DGLYYLGKIKRVSSSKQSCLVTFED-NSKYWVLWKDIQHA 58 (63)
T ss_dssp CCCCTTCEEEEECT-TSCEEEEEECCCCSTTSEEEEEETT-SCEEEEEGGGEECC
T ss_pred cceecCCEEEEEec-CCCEEEEEEEEEecCCCEEEEEEcc-CceeEEEeeccccc
Confidence 46999999999998 999999999999965 49999987 56677888888876
No 27
>2m0o_A PHD finger protein 1; tudor domain, H3K36ME3 binding, peptide binding protein; HET: M3L; NMR {Homo sapiens}
Probab=98.38 E-value=1.3e-06 Score=64.45 Aligned_cols=53 Identities=23% Similarity=0.312 Sum_probs=45.9
Q ss_pred CCCCCCCCCeEEEEecCCCCEEEEEEeeEeCC--eeEEEEecCCceEEEcCCCcccC
Q 025684 50 NQEKLAVGTKVQAVYSEDGEWYDATIEAITPN--GYYVTYDSWGNKEEVDPANVRPV 104 (249)
Q Consensus 50 ~~~~~kvGd~ClA~ys~Dg~wY~A~I~~i~~~--~~~V~F~~Ygn~E~V~~~~lrpl 104 (249)
+...|.+|+.++|+|+ ||.||.++|.+|+.. .|.|.|.| +..-.+...+|.+.
T Consensus 23 p~~~f~eGeDVLarws-DGlfYLGTI~kV~~~~e~ClV~F~D-~S~~W~~~kdi~~~ 77 (79)
T 2m0o_A 23 PRPRLWEGQDVLARWT-DGLLYLGTIKKVDSAREVCLVQFED-DSQFLVLWKDISPA 77 (79)
T ss_dssp CCCCCCTTCEEEBCCT-TSCCCEEEEEEEETTTTEEEEEETT-SCEEEEETTTBCCC
T ss_pred CcceeccCCEEEEEec-CCCEEeEEEEEeccCCCEEEEEEcC-CCeEEEEeeccccc
Confidence 4478999999999998 999999999999964 59999988 67788888888764
No 28
>2g3r_A Tumor suppressor P53-binding protein 1; tandem tudor domains, cell cycle-transcription complex; 1.25A {Homo sapiens} SCOP: b.34.9.1 b.34.9.1 PDB: 2ig0_A* 3lgf_A* 3lgl_A* 3lh0_A* 1xni_A
Probab=98.16 E-value=2.6e-06 Score=68.07 Aligned_cols=50 Identities=26% Similarity=0.442 Sum_probs=42.0
Q ss_pred CCCCeEEEEecCCCCEEEEEEeeEeCC-eeEEEEecCCceEEEcCCCcc---cCC
Q 025684 55 AVGTKVQAVYSEDGEWYDATIEAITPN-GYYVTYDSWGNKEEVDPANVR---PVN 105 (249)
Q Consensus 55 kvGd~ClA~ys~Dg~wY~A~I~~i~~~-~~~V~F~~Ygn~E~V~~~~lr---pl~ 105 (249)
.+|-.|+|+||.|+.||+.+|....++ .|.|.|+| |.+-+|...+|- |||
T Consensus 6 ~~G~rV~AkWsdn~~yYpG~V~~~~~~~ky~V~FdD-g~~~~v~~k~iiv~d~ip 59 (123)
T 2g3r_A 6 FVGLRVVAKWSSNGYFYSGKITRDVGAGKYKLLFDD-GYECDVLGKDILLCDPIP 59 (123)
T ss_dssp CTTCEEEEECTTTCCEEEEEEEEEEETTEEEEEETT-SCEEEEEGGGEECCSSCC
T ss_pred ccceEEEEEeccCCcCcccEEEEeccCCeEEEEEcC-CCeeEeecceEEEecccC
Confidence 469999999998889999999886655 59999998 777777778887 665
No 29
>1ssf_A Transformation related protein 53 binding protein 1; tudor domains, tandem, SH3-like fold, beta barrel, alpha- helix, cell cycle; NMR {Mus musculus} SCOP: b.34.9.1 b.34.9.1
Probab=98.15 E-value=2e-06 Score=71.34 Aligned_cols=48 Identities=27% Similarity=0.432 Sum_probs=41.4
Q ss_pred CCCCCeEEEEecCCCCEEEEEEeeEeCCe-eEEEEecCCceEEEcCCCcc
Q 025684 54 LAVGTKVQAVYSEDGEWYDATIEAITPNG-YYVTYDSWGNKEEVDPANVR 102 (249)
Q Consensus 54 ~kvGd~ClA~ys~Dg~wY~A~I~~i~~~~-~~V~F~~Ygn~E~V~~~~lr 102 (249)
-.+|..|+|+|+.|+-||+++|..+.+++ |.|.|.| |..-+|...+|.
T Consensus 9 ~~iG~rVfArWsd~~yyYpG~V~~~~~~~~Y~V~FdD-G~~k~v~~~div 57 (156)
T 1ssf_A 9 SFVGLRVVAKWSSNGYFYSGKITRDVGAGKYKLLFDD-GYECDVLGKDIL 57 (156)
T ss_dssp CSTTCEEEECSSCSSEEEEEEEEECCTTTEEEEECTT-SCEEEEETTTEE
T ss_pred chhccEEEEEcCCCCcccccEEEEeccCCEEEEEEcC-CCeeEeeccceE
Confidence 47899999999988888899999988765 9999999 888888766665
No 30
>1wgs_A MYST histone acetyltransferase 1; tudor domain, MYST family, struct genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.34.13.3
Probab=98.11 E-value=6.6e-06 Score=66.89 Aligned_cols=50 Identities=20% Similarity=0.376 Sum_probs=43.9
Q ss_pred CCCCCCCeEEEEecCCCCEEEEEEeeEeC----C--eeEEEEecCCce--EEEcCCCcc
Q 025684 52 EKLAVGTKVQAVYSEDGEWYDATIEAITP----N--GYYVTYDSWGNK--EEVDPANVR 102 (249)
Q Consensus 52 ~~~kvGd~ClA~ys~Dg~wY~A~I~~i~~----~--~~~V~F~~Ygn~--E~V~~~~lr 102 (249)
..|.+|+.|++.|. ||.||+|.|..|.. + .|.|.|.||+.. |.|+.++|.
T Consensus 11 ~~~~vGe~v~~~~~-d~~~y~AkIl~i~~~~~~~~~~YyVHY~gwNkR~DEWV~~~ri~ 68 (133)
T 1wgs_A 11 VTVEIGETYLCRRP-DSTWHSAEVIQSRVNDQEGREEFYVHYVGFNRRLDEWVDKNRLA 68 (133)
T ss_dssp CCCCTTSEEEEEET-TTEEEEEEEEEEEEETTTTEEEEEEECTTTCSSCCEEECTTTSC
T ss_pred cccCCCCEEEEEeC-CCCEEEEEEEEEEeccCCCceEEEEeccCcCCCceeecChhhcc
Confidence 46999999999996 99999999999773 2 289999999974 999999996
No 31
>3h8z_A FragIle X mental retardation syndrome-related Pro; tudor domains, FXR2, structura genomics, structural genomics consortium, SGC; 1.92A {Homo sapiens} PDB: 3o8v_A 3kuf_A 2bkd_N*
Probab=98.10 E-value=6.1e-06 Score=66.79 Aligned_cols=56 Identities=21% Similarity=0.405 Sum_probs=46.7
Q ss_pred CCCCCCCeEEEEecCCC----CEEEEEEeeEeCCeeEEEEecCCc--eEEEcCCCcccCCch
Q 025684 52 EKLAVGTKVQAVYSEDG----EWYDATIEAITPNGYYVTYDSWGN--KEEVDPANVRPVNLL 107 (249)
Q Consensus 52 ~~~kvGd~ClA~ys~Dg----~wY~A~I~~i~~~~~~V~F~~Ygn--~E~V~~~~lrpl~~l 107 (249)
..+.+||.+.+.+..+. .||.|+|.++.++.|.|.|.||++ .|.|.+++|||++..
T Consensus 59 ~~f~~gd~VEV~~~~~d~ep~gWw~a~I~~~kg~f~~V~y~~~~~~~~EiV~~~rlR~~n~~ 120 (128)
T 3h8z_A 59 KEITEGDEVEVYSRANEQEPCGWWLARVRMMKGDFYVIEYAACDATYNEIVTLERLRPVNPN 120 (128)
T ss_dssp -CCCTTCEEEEEECC---CCCEEEEEEEEEEETTEEEEEETTC----CEEECGGGEEECCCC
T ss_pred cCCCCCCEEEEEecCCCCCcCccEEEEEEEeeCCEEEEEEcCCCCCcceEEehhheEeCCCC
Confidence 57999999999886555 699999999999999999999998 699999999999753
No 32
>2f5k_A MORF-related gene 15 isoform 1; beta barrel, gene regulation; 2.20A {Homo sapiens} SCOP: b.34.13.3 PDB: 2efi_A
Probab=98.09 E-value=4.1e-06 Score=65.38 Aligned_cols=54 Identities=20% Similarity=0.364 Sum_probs=46.2
Q ss_pred CCCCCCCCCeEEEEecCCCCEEEEEEeeEeC--C--eeEEEEecCCce--EEEcCCCcccCC
Q 025684 50 NQEKLAVGTKVQAVYSEDGEWYDATIEAITP--N--GYYVTYDSWGNK--EEVDPANVRPVN 105 (249)
Q Consensus 50 ~~~~~kvGd~ClA~ys~Dg~wY~A~I~~i~~--~--~~~V~F~~Ygn~--E~V~~~~lrpl~ 105 (249)
+...|.+|+.|++.+ +|.||+|.|.+|.. . .|.|.|.||+.. |.|+.++|++..
T Consensus 19 ~~~~f~vGekVl~~~--~~~~YeAkIl~v~~~~~~~~Y~VHY~GwNkR~DEWV~~~Rl~k~t 78 (102)
T 2f5k_A 19 PKPKFQEGERVLCFH--GPLLYEAKCVKVAIKDKQVKYFIHYSGWNKNWDEWVPESRVLKYV 78 (102)
T ss_dssp CSCSCCTTCEEEEES--SSSEEEEEEEEEEEETTEEEEEEEETTSCGGGCEEEEGGGEEESS
T ss_pred CCcccCCCCEEEEEE--CCEEEEEEEEEEEEcCCCcEEEEEeCCcCCCceeeccHhhcccCC
Confidence 345799999999987 78999999999883 2 389999999974 999999988775
No 33
>2eko_A Histone acetyltransferase htatip; chromo domain, histone tail, chromatin organization modifier, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.05 E-value=4.7e-06 Score=63.28 Aligned_cols=52 Identities=19% Similarity=0.346 Sum_probs=45.2
Q ss_pred CCCCCCCeEEEEec---CCCCEEEEEEeeEeCC----eeEEEEecCCce--EEEcCCCccc
Q 025684 52 EKLAVGTKVQAVYS---EDGEWYDATIEAITPN----GYYVTYDSWGNK--EEVDPANVRP 103 (249)
Q Consensus 52 ~~~kvGd~ClA~ys---~Dg~wY~A~I~~i~~~----~~~V~F~~Ygn~--E~V~~~~lrp 103 (249)
..+.+|+.|+|.+. .++.||+|.|.+|... .|.|.|.||+.. |.|+.++|+.
T Consensus 8 ~~~~vG~kv~v~~~~~~~~~~~y~AkIl~i~~~~~~~~YyVHY~g~NkRlDEWV~~~rl~~ 68 (87)
T 2eko_A 8 GEIIEGCRLPVLRRNQDNEDEWPLAEILSVKDISGRKLFYVHYIDFNRRLDEWVTHERLDL 68 (87)
T ss_dssp CSCCTTCEEEBCEECTTCCEECCEEEEEEECCSSSCCCEEEEECSSCSCCCEEECTTTBCG
T ss_pred ccccCCCEEEEEEcccCCCCeEEEEEEEEEEEcCCCcEEEEEeCCCCcccccccCHhHccc
Confidence 57999999999984 5899999999998853 399999999975 9999999863
No 34
>2ro0_A Histone acetyltransferase ESA1; HAT, chromodomain, tudor domain, RNA binding, activator, chromatin regulator, transcription; NMR {Saccharomyces cerevisiae}
Probab=98.01 E-value=9.8e-06 Score=62.09 Aligned_cols=50 Identities=16% Similarity=0.266 Sum_probs=43.7
Q ss_pred CCCCCCCeEEEEecCCCCEEEEEEeeEeCC----eeEEEEecCCce--EEEcCCCccc
Q 025684 52 EKLAVGTKVQAVYSEDGEWYDATIEAITPN----GYYVTYDSWGNK--EEVDPANVRP 103 (249)
Q Consensus 52 ~~~kvGd~ClA~ys~Dg~wY~A~I~~i~~~----~~~V~F~~Ygn~--E~V~~~~lrp 103 (249)
..+.+|+.|+|.+ ||.||+|.|.+|... .|.|.|.||+.. |.|+.++|..
T Consensus 22 ~~~~vG~kv~v~~--~~~~y~AkIl~ir~~~~~~~YyVHY~g~NkRlDEWV~~~rl~l 77 (92)
T 2ro0_A 22 DDIIIKCQCWVQK--NDEERLAEILSINTRKAPPKFYVHYVNYNKRLDEWITTDRINL 77 (92)
T ss_dssp TSCCTTCEEEEEE--TTEEEEEEEEEEECSSSSCEEEEEETTSCTTSCEEEEGGGEET
T ss_pred ccccCCCEEEEEE--CCEEEEEEEEEEEEcCCCcEEEEEeCCcCcccccccCHhHccc
Confidence 5699999999997 899999999998842 399999999974 9999988863
No 35
>2lcc_A AT-rich interactive domain-containing protein 4A; chromobarrel domain, RBBP1, transcription; NMR {Homo sapiens}
Probab=97.99 E-value=5.7e-06 Score=61.21 Aligned_cols=53 Identities=28% Similarity=0.427 Sum_probs=44.5
Q ss_pred CCCCCCCeEEEEec--CCCCEEEEEEeeEeCC----eeEEEEecCCce--EEEcCCCcccC
Q 025684 52 EKLAVGTKVQAVYS--EDGEWYDATIEAITPN----GYYVTYDSWGNK--EEVDPANVRPV 104 (249)
Q Consensus 52 ~~~kvGd~ClA~ys--~Dg~wY~A~I~~i~~~----~~~V~F~~Ygn~--E~V~~~~lrpl 104 (249)
..+.+|+.|++.+. .++.||+|.|.+|... .|.|.|.||+.. |.|+.++|...
T Consensus 4 ~~~~vGekV~~~~~d~k~~~~y~AkIl~i~~~~~~~~Y~VHY~gwnkr~DEWV~~~ri~~~ 64 (76)
T 2lcc_A 4 EPCLTGTKVKVKYGRGKTQKIYEASIKSTEIDDGEVLYLVHYYGWNVRYDEWVKADRIIWP 64 (76)
T ss_dssp CCSSTTCEEEEEEEETTEEEEEEEEEEEEEEETTEEEEEEEETTSCCSSCEEEEGGGEECS
T ss_pred cccCCCCEEEEEeCCCCCCCEEEEEEEEEEccCCceEEEEEeCCcCCCceEecChhhcccc
Confidence 36899999999997 3379999999998842 389999999974 99998888755
No 36
>2eqm_A PHD finger protein 20-like 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2jtf_A
Probab=97.99 E-value=2.3e-05 Score=59.46 Aligned_cols=55 Identities=22% Similarity=0.500 Sum_probs=47.0
Q ss_pred CCCCCCCCCeEEEEecCCCCEEEEEEeeEe--CCeeEEEEecCCce--EEEcCC--CcccCC
Q 025684 50 NQEKLAVGTKVQAVYSEDGEWYDATIEAIT--PNGYYVTYDSWGNK--EEVDPA--NVRPVN 105 (249)
Q Consensus 50 ~~~~~kvGd~ClA~ys~Dg~wY~A~I~~i~--~~~~~V~F~~Ygn~--E~V~~~--~lrpl~ 105 (249)
+...|++|+++.|+-. .|.||+|+|+.+. +..|.|.|+||.+. +.|+.+ +|+|+-
T Consensus 16 ~~~~F~vGmkLEA~D~-~~~~~~a~i~~v~~~~~~v~VHfdGW~~~yDeWv~~dS~~I~P~g 76 (88)
T 2eqm_A 16 PGITFEIGARLEALDY-LQKWYPSRIEKIDYEEGKMLVHFERWSHRYDEWIYWDSNRLRPLE 76 (88)
T ss_dssp SSCCCCSSCEEEEECT-TSCEEEEEEEEEETTTTEEEEEESSSTTTEEEEEETTSCCEECCC
T ss_pred CcCcCCCCCEEEEEcC-CCCeeEEEEEEEeccCCEEEEEECCCCCcccEEeeCCCCcEeccc
Confidence 4578999999999965 6799999999888 44699999999984 889888 888884
No 37
>2rnz_A Histone acetyltransferase ESA1; HAT, chromodomain, tudor domain, RNA binding, activator, chromatin regulator, transcription; NMR {Saccharomyces cerevisiae}
Probab=97.88 E-value=1.8e-05 Score=60.84 Aligned_cols=50 Identities=16% Similarity=0.266 Sum_probs=43.6
Q ss_pred CCCCCCCeEEEEecCCCCEEEEEEeeEeCC----eeEEEEecCCce--EEEcCCCccc
Q 025684 52 EKLAVGTKVQAVYSEDGEWYDATIEAITPN----GYYVTYDSWGNK--EEVDPANVRP 103 (249)
Q Consensus 52 ~~~kvGd~ClA~ys~Dg~wY~A~I~~i~~~----~~~V~F~~Ygn~--E~V~~~~lrp 103 (249)
..+.+|+.|+|.+ ||.||+|.|.+|... .|.|.|.||+.. |.|+.++|..
T Consensus 24 ~~~~vG~kv~v~~--~~~~yeAeIl~ir~~~g~~~YYVHY~g~NkRlDEWV~~~RI~l 79 (94)
T 2rnz_A 24 DDIIIKCQCWVQK--NDEERLAEILSINTRKAPPKFYVHYVNYNKRLDEWITTDRINL 79 (94)
T ss_dssp GGCCTTEEEEEEC--SSCEEEEEEEEEECSSSSCEEEEECTTSCSTTCEEEETTTBCS
T ss_pred ccccCCCEEEEEE--CCEEEEEEEEEEEEcCCCcEEEEEeCCcCcccccccCHHHccc
Confidence 5699999999996 899999999998842 399999999974 9999999863
No 38
>3m9q_A Protein MALE-specific lethal-3; chromodomain, MSL3, methyllysine recognition, aromatic CAGE, complex, transcription upregulation; 1.29A {Drosophila melanogaster} SCOP: b.34.13.0
Probab=97.73 E-value=5.1e-05 Score=59.04 Aligned_cols=54 Identities=11% Similarity=0.191 Sum_probs=45.5
Q ss_pred CCCCCCCeEEEEecC---CCCEEEEEEeeEeC------C---eeEEEEecCCce--EEEcCCCcccCC
Q 025684 52 EKLAVGTKVQAVYSE---DGEWYDATIEAITP------N---GYYVTYDSWGNK--EEVDPANVRPVN 105 (249)
Q Consensus 52 ~~~kvGd~ClA~ys~---Dg~wY~A~I~~i~~------~---~~~V~F~~Ygn~--E~V~~~~lrpl~ 105 (249)
..|.+|+.|++.+.+ .+.+|+|.|..|.. . .|.|.|.||+.+ |.|+.++|+...
T Consensus 18 ~~f~~GEkVLc~h~d~~kg~~lYeAKIl~v~~~~~~~~~~~~~Y~VHY~GWn~rwDEWV~edRilk~~ 85 (101)
T 3m9q_A 18 PLFHKGEIVLCYEPDKSKARVLYTSKVLNVFERRNEHGLRFYEYKIHFQGWRPSYDRAVRATVLLKDT 85 (101)
T ss_dssp CCCCTTCEEEEECCCTTSCCCEEEEEEEEEEEEECTTSCEEEEEEEEETTSCGGGCEEECGGGEEECC
T ss_pred CcccCCCEEEEEecCCCCCCcceEeEEEEEEecCCccccCceEEEEEeCCCCcCceeecCHHHcccCC
Confidence 579999999998742 37999999999863 1 389999999985 999999998875
No 39
>2lrq_A Protein MRG15, NUA4 complex subunit EAF3 homolog; epigenetics, LID complex, transcription; NMR {Drosophila melanogaster}
Probab=96.85 E-value=5.9e-06 Score=62.38 Aligned_cols=54 Identities=24% Similarity=0.430 Sum_probs=45.0
Q ss_pred CCCCCCCCCeEEEEecCCCCEEEEEEeeEeCC----eeEEEEecCCce--EEEcCCCcccCC
Q 025684 50 NQEKLAVGTKVQAVYSEDGEWYDATIEAITPN----GYYVTYDSWGNK--EEVDPANVRPVN 105 (249)
Q Consensus 50 ~~~~~kvGd~ClA~ys~Dg~wY~A~I~~i~~~----~~~V~F~~Ygn~--E~V~~~~lrpl~ 105 (249)
+...|.+|+.|++.+ ++.||+|.|.+|... .|.|.|.||+.. |.|+.++|....
T Consensus 9 ~~~~~~~Gekv~~~~--~~~~y~AkIl~i~~~~~~~~YyVHY~GwNkR~DEWV~~~Rl~k~t 68 (85)
T 2lrq_A 9 ANTLFVDGERVLCFH--GPLIYEAKVLKTKPDATPVEYYIHYAGWSKNWDEWVPENRVLKYN 68 (85)
Confidence 345799999999998 568999999998742 389999999974 999888888764
No 40
>3sd4_A PHD finger protein 20; tudor domain, transcription; 1.93A {Homo sapiens} PDB: 3q1j_A
Probab=97.63 E-value=0.00019 Score=51.68 Aligned_cols=54 Identities=24% Similarity=0.432 Sum_probs=42.9
Q ss_pred CCCCCCCCCeEEEEecCCCCEEEEEEeeEe--CCeeEEEEecCCc--eEEEcCC--CcccC
Q 025684 50 NQEKLAVGTKVQAVYSEDGEWYDATIEAIT--PNGYYVTYDSWGN--KEEVDPA--NVRPV 104 (249)
Q Consensus 50 ~~~~~kvGd~ClA~ys~Dg~wY~A~I~~i~--~~~~~V~F~~Ygn--~E~V~~~--~lrpl 104 (249)
+...|++|+++.|+.. .+.||.|+|..|+ +..+.|.|+||.+ .+.++.+ +|+|+
T Consensus 9 ~~~~F~vGmkLEa~d~-~~p~~~AtV~~v~~~~~~~~VhfdGw~~~~D~W~~~dS~~i~Pv 68 (69)
T 3sd4_A 9 RGISFEVGAQLEARDR-LKNWYPAHIEDIDYEEGKVLIHFKRWNHRYDEWFCWDSPYLRPL 68 (69)
T ss_dssp TTCCCSTTCEEEEECT-TSCEEEEEEEEEETTTTEEEEEETTSCGGGCEEEETTCTTEECC
T ss_pred CCCCcCCCCEEEEEEC-CCCccccEEEEEeccCCEEEEEeCCCCCCCCEEEcCCCCCeeEC
Confidence 3468999999999965 6678999999994 4558999999986 3777665 46664
No 41
>2k3y_A Chromatin modification-related protein EAF3; dimethylated histone H3K36, EAF3-H3K36ME2 fusion, chromo barrel domain, histone deacetylase; HET: M2L; NMR {Saccharomyces cerevisiae}
Probab=97.55 E-value=0.00011 Score=59.98 Aligned_cols=54 Identities=26% Similarity=0.462 Sum_probs=45.8
Q ss_pred CCCCCCCCeEEEEecCCCCEEEEEEeeEeC------------------------------C------------eeEEEEe
Q 025684 51 QEKLAVGTKVQAVYSEDGEWYDATIEAITP------------------------------N------------GYYVTYD 88 (249)
Q Consensus 51 ~~~~kvGd~ClA~ys~Dg~wY~A~I~~i~~------------------------------~------------~~~V~F~ 88 (249)
...|.+|+.|+|.+ .+.||+|.|..|.. . .|.|.|.
T Consensus 7 ~~~f~~gekvl~~h--g~llYeAKVl~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~Y~VHY~ 84 (136)
T 2k3y_A 7 EQEFALGGRVLAFH--GPLMYEAKILKIWDPSSKMYTSIPNDKPGGSSQATKEIKPQKLGEDESIPEEIINGKSFFIHYQ 84 (136)
T ss_dssp GGSCCTTSEEEEEC--SSCEEEEEEEEEEETTTTEEEECSSCCCTTCSCCCSSBCCCCSCSSCCCCHHHHTSCEEEECCT
T ss_pred ccccCCCCEEEEEE--CCeeEEEEEEEEEeccccccccccccccccccccccccccccccccccCcccccccceEEEEeC
Confidence 35799999999988 56899999998762 1 4899999
Q ss_pred cCCce--EEEcCCCcccCCc
Q 025684 89 SWGNK--EEVDPANVRPVNL 106 (249)
Q Consensus 89 ~Ygn~--E~V~~~~lrpl~~ 106 (249)
||..+ |.|+.++|+....
T Consensus 85 GWn~rwDEWV~~dRil~~~e 104 (136)
T 2k3y_A 85 GWKSSWDEWVGYDRIRAYNE 104 (136)
T ss_dssp TSCGGGCEEEETTTEEESCH
T ss_pred CcCCcceeeecHhhhhhCCH
Confidence 99985 9999999999863
No 42
>2bud_A Males-absent on the first protein; transferase, MOF, HAT, acetyl-transfer, dosage compensation complex, DCC, royal family; NMR {Drosophila melanogaster} SCOP: b.34.13.3
Probab=97.50 E-value=0.00016 Score=55.27 Aligned_cols=50 Identities=14% Similarity=0.108 Sum_probs=42.6
Q ss_pred CCCCeEEEEecCCCCEEEEEEeeEeCC-------eeEEEEecCCce--EEEcCCCcccCC
Q 025684 55 AVGTKVQAVYSEDGEWYDATIEAITPN-------GYYVTYDSWGNK--EEVDPANVRPVN 105 (249)
Q Consensus 55 kvGd~ClA~ys~Dg~wY~A~I~~i~~~-------~~~V~F~~Ygn~--E~V~~~~lrpl~ 105 (249)
..|..|++.++ ||.||+|.|.++... .|.|.|.||+.. |.|+.++|..+.
T Consensus 16 ~~~e~vlc~~~-dg~~yeAeIl~ir~~~~~~~~~~YYVHY~g~NkRlDEWV~~~RL~~~~ 74 (92)
T 2bud_A 16 NPDKIYFIRRE-DGTVHRGQVLQSRTTENAAAPDEYYVHYVGLNRRLDGWVGRHRISDNA 74 (92)
T ss_dssp CTTSCEEEECT-TSCEEEEEEEEEECTTTCSSCCEEEEECSSSCTTTCEEEETTTEESCH
T ss_pred CCCCEEEEEeC-CCCEEEEEEEEEeeccCCCCCcEEEEEeCCcccccccccCHHHhchhc
Confidence 34889999996 999999999998732 399999999974 999999998874
No 43
>3m9p_A MALE-specific lethal 3 homolog; chromodomain, MSL3, histone H4 tail, DNA backbone recognitio methyllysine recognition, H4K20ME1; HET: DNA MLZ; 2.35A {Homo sapiens} PDB: 3oa6_A* 3ob9_A*
Probab=97.44 E-value=0.00017 Score=56.92 Aligned_cols=54 Identities=22% Similarity=0.313 Sum_probs=44.9
Q ss_pred CCCCCCCeEEEEecCC----CCEEEEEEeeEeC----C-----eeEEEEecCCce--EEEcCCCcccCCc
Q 025684 52 EKLAVGTKVQAVYSED----GEWYDATIEAITP----N-----GYYVTYDSWGNK--EEVDPANVRPVNL 106 (249)
Q Consensus 52 ~~~kvGd~ClA~ys~D----g~wY~A~I~~i~~----~-----~~~V~F~~Ygn~--E~V~~~~lrpl~~ 106 (249)
..|.+|+.|++.+ +| +.||+|.|..|.. . .|.|.|.||+.. |.|+.++|....+
T Consensus 18 ~~F~~GEkVLc~h-gd~~k~~~lYeAKIl~v~~~~~~~g~~~~~Y~VHY~GWn~~wDEWV~e~rllk~~e 86 (110)
T 3m9p_A 18 FKFHSGEKVLCFE-PDPTKARVLYDAKIVDVIVGKDEKGRKIPEYLIHFNGWNRSWDRWAAEDHVLRDTD 86 (110)
T ss_dssp CCSCTTCEEEEEC-SCTTSCCCEEEEEEEEEEEEECTTCCEEEEEEEEETTSCGGGCEEEEGGGEEECCH
T ss_pred CcccCCCEEEEEc-CCCCCCCCceeeEEEEEEeccCcccccceEEEEEECCCCcchhhccCHhhhhcCCH
Confidence 4699999999975 46 7999999999862 1 389999999974 9999999988753
No 44
>3oa6_A MALE-specific lethal 3 homolog; chromodomain, MSL3, histone H4 tail, DNA backbone recognitio methyllysine recognition, H4K20ME1; HET: DNA MLZ; 2.35A {Homo sapiens} PDB: 3ob9_A*
Probab=97.29 E-value=0.00036 Score=55.04 Aligned_cols=56 Identities=20% Similarity=0.311 Sum_probs=44.4
Q ss_pred CCCCCCCCCeEEEEecCC---CCEEEEEEeeEeC----C-----eeEEEEecCCce--EEEcCCCcccCC
Q 025684 50 NQEKLAVGTKVQAVYSED---GEWYDATIEAITP----N-----GYYVTYDSWGNK--EEVDPANVRPVN 105 (249)
Q Consensus 50 ~~~~~kvGd~ClA~ys~D---g~wY~A~I~~i~~----~-----~~~V~F~~Ygn~--E~V~~~~lrpl~ 105 (249)
+...|.+|+.|+|.+.+. ..+|+|.|..|.. . .|.|.|.||+++ |.|+.++|+...
T Consensus 16 ~k~~F~~gEkVLc~h~d~~kg~llYeAKIl~v~~~~~~~~~~~~~Y~VHY~GWn~~WDEWV~~drllk~n 85 (110)
T 3oa6_A 16 MKFKFHSGEKVLCFEPDPTKARVLYDAKIVDVIVGKDEKGRKIPEYLIHFNGWNRSWDRWAAEDHVLRDT 85 (110)
T ss_dssp --CCSCTTCEEEEECSCTTSCCCEEEEEEEEEEEEECTTCCEEEEEEEEETTSCGGGCEEEEGGGEEECC
T ss_pred CCcccCCCCEEEEEecCCCCCcccEEEEEEEEEeccCCcCCcccEEEEEECCcCcchhhccChhhhhcCC
Confidence 346799999999977532 2599999998851 1 299999999985 999999998875
No 45
>3h8z_A FragIle X mental retardation syndrome-related Pro; tudor domains, FXR2, structura genomics, structural genomics consortium, SGC; 1.92A {Homo sapiens} PDB: 3o8v_A 3kuf_A 2bkd_N*
Probab=97.13 E-value=0.00075 Score=54.49 Aligned_cols=50 Identities=14% Similarity=0.411 Sum_probs=40.2
Q ss_pred CCeEEEEecCCCCEEEEEEeeEeCCeeEEEEec-CCceEEEcCCCcccCCch
Q 025684 57 GTKVQAVYSEDGEWYDATIEAITPNGYYVTYDS-WGNKEEVDPANVRPVNLL 107 (249)
Q Consensus 57 Gd~ClA~ys~Dg~wY~A~I~~i~~~~~~V~F~~-Ygn~E~V~~~~lrpl~~l 107 (249)
++.+.. +..+|.||.|.|..|..+.++|.|.+ +.-.+.|++++|||.|+.
T Consensus 5 ~~~VEV-~~~~G~~y~a~V~~v~~d~~~V~f~n~w~~~~~vp~~~vRlpP~~ 55 (128)
T 3h8z_A 5 GLPVEV-RGSNGAFYKGFVKDVHEDSVTIFFENNWQSERQIPFGDVRLPPPA 55 (128)
T ss_dssp TCEEEE-ECTTSCEEEEEEEEECSSEEEEEETTCTTCCEEEEGGGEECCCCC
T ss_pred ccEEEE-ecCCCCEEEEEEEEEeCCcEEEEEccccCcceEechhhEEcCCCc
Confidence 344444 45689999999999999999999965 444689999999998754
No 46
>3ask_A E3 ubiquitin-protein ligase UHRF1; histone reader modules, epigenetic regulation, trimethylaion of lysine residue, ligase-DNA binding protein; HET: M3L; 2.90A {Homo sapiens}
Probab=96.77 E-value=0.0017 Score=57.01 Aligned_cols=53 Identities=25% Similarity=0.448 Sum_probs=43.7
Q ss_pred CCCCCCeEEEEecCCCCEEEEEEeeEeC---------C--eeEEEEecCCce--EEEcCCCcccCC
Q 025684 53 KLAVGTKVQAVYSEDGEWYDATIEAITP---------N--GYYVTYDSWGNK--EEVDPANVRPVN 105 (249)
Q Consensus 53 ~~kvGd~ClA~ys~Dg~wY~A~I~~i~~---------~--~~~V~F~~Ygn~--E~V~~~~lrpl~ 105 (249)
-++||+.+-|+....|-||+|.|..|+. + .|.|.|.+|.+. ..+...+|||..
T Consensus 2 ~yki~~~vd~~d~~~Gawfea~i~~v~~~~~~~~~~~d~~~y~v~y~~~~~~~~~~~~~~~irpra 67 (226)
T 3ask_A 2 LYKVNEYVDARDTNMGAWFEAQVVRVTRKAPSRPALEEDVIYHVKYDDYPENGVVQMNSRDVRARA 67 (226)
T ss_dssp CSCTTCEEEEECTTTCCEEEEEEEEEEECC------CCCEEEEEEETTCGGGCEEEEEGGGEEECC
T ss_pred ccccCceEEeeecCCCceeEEEEEEEeccccccCCCCCceEEEeecccCcccCceecccccccccc
Confidence 4799999999998899999999999984 3 289999999764 445666788763
No 47
>2qqr_A JMJC domain-containing histone demethylation protein 3A; histone lysine demethylase, tandem hybrid tudor domains, metal binding protein; 1.80A {Homo sapiens} SCOP: b.34.9.1 b.34.9.1 PDB: 2qqs_A* 2gfa_A* 2gf7_A*
Probab=96.66 E-value=0.0032 Score=50.18 Aligned_cols=55 Identities=20% Similarity=0.409 Sum_probs=46.0
Q ss_pred CCCCCCCeEEEEecCCCCEEEEEEeeEeCC-eeEEEEecCCceEEEcCCCcccCCch
Q 025684 52 EKLAVGTKVQAVYSEDGEWYDATIEAITPN-GYYVTYDSWGNKEEVDPANVRPVNLL 107 (249)
Q Consensus 52 ~~~kvGd~ClA~ys~Dg~wY~A~I~~i~~~-~~~V~F~~Ygn~E~V~~~~lrpl~~l 107 (249)
..+.+|+.+.|++. +|.||+|+|.+++.. .|.|.|.|=..+..+..++|--.+-+
T Consensus 4 ~~v~vGq~V~akh~-ngryy~~~V~~~~~~~~y~V~F~DgS~s~dl~peDIvs~dc~ 59 (118)
T 2qqr_A 4 QSITAGQKVISKHK-NGRFYQCEVVRLTTETFYEVNFDDGSFSDNLYPEDIVSQDCL 59 (118)
T ss_dssp SCCCTTCEEEEECT-TSSEEEEEEEEEEEEEEEEEEETTSCEEEEECGGGBCSSCHH
T ss_pred ceeccCCEEEEECC-CCCEEeEEEEEEeeEEEEEEEcCCCCccCCCCHhhccccccc
Confidence 46889999999986 999999999999754 48999999777888888888776543
No 48
>3e9g_A Chromatin modification-related protein EAF3; chromatin remodeling, chromo domain, transcription factor, transcription regulation; 2.50A {Saccharomyces cerevisiae} PDB: 2k3x_A 3e9f_A*
Probab=96.28 E-value=0.01 Score=47.87 Aligned_cols=53 Identities=26% Similarity=0.441 Sum_probs=44.2
Q ss_pred CCCCCCCeEEEEecCCCCEEEEEEeeEeC----------------------------------------C--eeEEEEec
Q 025684 52 EKLAVGTKVQAVYSEDGEWYDATIEAITP----------------------------------------N--GYYVTYDS 89 (249)
Q Consensus 52 ~~~kvGd~ClA~ys~Dg~wY~A~I~~i~~----------------------------------------~--~~~V~F~~ 89 (249)
..|++|..|+|.+ .+.-|+|.|..|.. . .|.|.|.|
T Consensus 6 p~f~~gE~VlcfH--g~~~YeAKIl~i~d~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~Y~VHY~G 83 (130)
T 3e9g_A 6 QEFALGGRCLAFH--GPLMYEAKILKIWDPSSKMYTSIPNDKPGGSSQATKEIKPQKLGEDESIPEEIINGKCFFIHYQG 83 (130)
T ss_dssp -CCCTTCEEEEEE--TTEEEEEEEEEEEETTTTEEEECC--------------CCBCCCTTCCCCTTTTTSCEEEEEETT
T ss_pred ccccCCCEEEEEe--CCcceeeEEEEeeCCCcceeecccccccccccccccccccccccccccCchhhccCceEEEEeCC
Confidence 4799999999998 57799999999830 0 38999999
Q ss_pred CCce--EEEcCCCcccCCc
Q 025684 90 WGNK--EEVDPANVRPVNL 106 (249)
Q Consensus 90 Ygn~--E~V~~~~lrpl~~ 106 (249)
|+.+ |.|+.++|.....
T Consensus 84 Wn~~WDEWV~e~rvlk~~e 102 (130)
T 3e9g_A 84 WKSSWDEWVGYDRIRAYNE 102 (130)
T ss_dssp SCGGGCEEEETTTEECSSH
T ss_pred CCCChhhccCHhhhhccCH
Confidence 9985 9999999998853
No 49
>3db3_A E3 ubiquitin-protein ligase UHRF1; cell cycle, DNA damage, DNA repair, tandem tudor domains, LI metal binding, DNA replication; HET: M3L; 2.40A {Homo sapiens} PDB: 3db4_A 2l3r_A*
Probab=96.20 E-value=0.0099 Score=49.53 Aligned_cols=54 Identities=24% Similarity=0.420 Sum_probs=45.3
Q ss_pred CCCCCCCeEEEEecCCCCEEEEEEeeEeC------------------C--eeEEEEecCCc--eEEEcCCCcccCC
Q 025684 52 EKLAVGTKVQAVYSEDGEWYDATIEAITP------------------N--GYYVTYDSWGN--KEEVDPANVRPVN 105 (249)
Q Consensus 52 ~~~kvGd~ClA~ys~Dg~wY~A~I~~i~~------------------~--~~~V~F~~Ygn--~E~V~~~~lrpl~ 105 (249)
.-+++|+.+-|+=..-|-|++|.|..|+. + .|.|.|.+|.+ .-.+++.+|||..
T Consensus 9 glYKinelVDarD~~~GAWFEA~Iv~Vtr~~~~~~~p~~s~~~~~~~edviYhVkyddype~gvv~~~~~~iRpRA 84 (161)
T 3db3_A 9 GLYKVNEYVDARDTNMGAWFEAQVVRVTRKAPSRDEPCSSTSRPALEEDVIYHVKYDDYPENGVVQMNSRDVRARA 84 (161)
T ss_dssp CSSCTTCEEEEECTTTCCEEEEEEEEEEEC-----------------CCEEEEEEESSCGGGCEEEEEGGGEECCC
T ss_pred ceEEecceeeeeccCCCcceEEEEEEEEecCCCCCCcccccccCCCcCceEEEEEeccCccCCeEecchhccccce
Confidence 57899999999988889999999999873 2 28999999975 4567778999874
No 50
>2xdp_A Lysine-specific demethylase 4C; oxidoreductase, histone modification; 1.56A {Homo sapiens}
Probab=95.87 E-value=0.0025 Score=51.07 Aligned_cols=54 Identities=19% Similarity=0.316 Sum_probs=44.9
Q ss_pred CCCCCCCeEEEEecCCCCEEEEEEeeEeCC-eeEEEEecCCceEEEcCCCcccCCc
Q 025684 52 EKLAVGTKVQAVYSEDGEWYDATIEAITPN-GYYVTYDSWGNKEEVDPANVRPVNL 106 (249)
Q Consensus 52 ~~~kvGd~ClA~ys~Dg~wY~A~I~~i~~~-~~~V~F~~Ygn~E~V~~~~lrpl~~ 106 (249)
..+.+|+.+.|+|. +|.||+|+|..++.. .|.|.|.|=..+..+..++|--.+-
T Consensus 5 ~~v~vGq~V~ak~~-ngryy~~~V~~~~~~~~y~V~F~DgS~s~dl~PedIvs~dc 59 (123)
T 2xdp_A 5 KVISVGQTVITKHR-NTRYYSCRVMAVTSQTFYEVMFDDGSFSRDTFPEDIVSRDC 59 (123)
T ss_dssp CCCCTTCCCCCCCC-CCCCCCCEEEEEEEEEEEEEEETTSCEEEEECGGGBCSSCH
T ss_pred cccccCCEEEEECC-CCcEEeEEEEEEeeEEEEEEEcCCCCccCCCCHhHcccccc
Confidence 46899999999986 899999999999854 4899999966678887777766553
No 51
>3dlm_A Histone-lysine N-methyltransferase setdb1; setdb1_human, structural genomics, structural genomics consortium, SGC, alternative splicing; 1.77A {Homo sapiens}
Probab=95.40 E-value=0.022 Score=49.56 Aligned_cols=49 Identities=22% Similarity=0.401 Sum_probs=38.9
Q ss_pred CCCCCCCeEEEEecCCCCEEEEEEeeEeC--Ce--eEEEEecCCceEEEcCCCcc
Q 025684 52 EKLAVGTKVQAVYSEDGEWYDATIEAITP--NG--YYVTYDSWGNKEEVDPANVR 102 (249)
Q Consensus 52 ~~~kvGd~ClA~ys~Dg~wY~A~I~~i~~--~~--~~V~F~~Ygn~E~V~~~~lr 102 (249)
..++||..++|+|. ++.||+|+|.+|.. ++ |.|.|.+=|. ..|+...|-
T Consensus 7 ~~l~Vg~~vlg~k~-~~~W~rg~v~~I~~~~~g~~YkVkF~~~g~-~ivs~~hiA 59 (213)
T 3dlm_A 7 GDLIVSMRILGKKR-TKTWHKGTLIAIQTVGPGKKYKVKFDNKGK-SLLSGNHIA 59 (213)
T ss_dssp TTEETTCEEEEECT-TSBEEEEEEEEEEEETTEEEEEEEESSSCE-EEECGGGEE
T ss_pred CcEEEccEEEEEec-CCcEEEEEEEEEEECCCCeEEEEEEcCCCC-EEeecceEE
Confidence 36889999999996 78999999999875 33 9999996443 567666554
No 52
>2xdp_A Lysine-specific demethylase 4C; oxidoreductase, histone modification; 1.56A {Homo sapiens}
Probab=95.17 E-value=0.032 Score=44.65 Aligned_cols=53 Identities=21% Similarity=0.332 Sum_probs=44.8
Q ss_pred CCCCCCCeEEEEecCCCCEEEEEEeeEeC-CeeEEEEecCCceEEEcCCCcccCCc
Q 025684 52 EKLAVGTKVQAVYSEDGEWYDATIEAITP-NGYYVTYDSWGNKEEVDPANVRPVNL 106 (249)
Q Consensus 52 ~~~kvGd~ClA~ys~Dg~wY~A~I~~i~~-~~~~V~F~~Ygn~E~V~~~~lrpl~~ 106 (249)
....+|..+..+|. ||+-|.|+..+..- ..|+|.|.| |..-++..++|..+.+
T Consensus 63 GpP~~G~~V~V~W~-DG~~y~a~f~g~~~~~~YtV~FeD-gs~~~~kR~~iyt~~E 116 (123)
T 2xdp_A 63 GPPAEGEVVQVKWP-DGKLYGAKYFGSNIAHMYQVEFED-GSQIAMKREDIYTLDE 116 (123)
T ss_dssp CCCCTTCEEEEECT-TSCEEEEEEEEEEEEEEEEEECTT-SCEEEEEGGGCCCSSS
T ss_pred CCCCCCCEEEEEcC-CCCEEeEEEeeeeeEEEEEEEECC-CCeEEecHHHcccccc
Confidence 46788999999997 99999999998764 359999999 7788888888887753
No 53
>1wjq_A KIAA1798 protein; MBT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.34.9.3
Probab=94.50 E-value=0.081 Score=41.28 Aligned_cols=57 Identities=19% Similarity=0.261 Sum_probs=44.9
Q ss_pred CCCCCCCCCCeEEEEecCC-CCEEEEEEeeEeCCeeEEEEecCCce--EEEc--CCCcccCC
Q 025684 49 DNQEKLAVGTKVQAVYSED-GEWYDATIEAITPNGYYVTYDSWGNK--EEVD--PANVRPVN 105 (249)
Q Consensus 49 ~~~~~~kvGd~ClA~ys~D-g~wY~A~I~~i~~~~~~V~F~~Ygn~--E~V~--~~~lrpl~ 105 (249)
.+...|++|++..|+=..+ ..++.|+|.+|.+..+.|.|+||.+. ..+. ..+|+|+-
T Consensus 9 ~p~~~F~~GMKLEAvD~~~p~~icvATV~~v~g~rl~v~fDGw~~~~D~W~~~dSpdIhPVG 70 (107)
T 1wjq_A 9 KPPHGFQKKMKLEVVDKRNPMFIRVATVADTDDHRVKVHFDGWNNCYDYWIDADSPDIHPVG 70 (107)
T ss_dssp CCSSSCCSSCEEEEECTTCTTCEEEEEEEEECSSCEEEECSSSCGGGCEEECTTCSSCEETT
T ss_pred CCcccCCCCCEEEEEcCCCCCcEEeEEEEEecCCEEEEEeCCCCCcCCEEEECCCCCcccCc
Confidence 3457899999999997444 35899999999888899999999974 3443 44788774
No 54
>2daq_A WHSC1L1 protein, isoform long; PWWP domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.34.9.2
Probab=94.49 E-value=0.087 Score=40.51 Aligned_cols=54 Identities=19% Similarity=0.081 Sum_probs=45.0
Q ss_pred CCCCCCCeEEEEecCCCCEEEEEEeeEe------------CCeeEEEEecCCceEEEcCCCcccCCc
Q 025684 52 EKLAVGTKVQAVYSEDGEWYDATIEAIT------------PNGYYVTYDSWGNKEEVDPANVRPVNL 106 (249)
Q Consensus 52 ~~~kvGd~ClA~ys~Dg~wY~A~I~~i~------------~~~~~V~F~~Ygn~E~V~~~~lrpl~~ 106 (249)
..+.+||.|.|+..+ --|+||+|.... .+.|.|.|.|-++...|+..+|.|+..
T Consensus 7 ~~~~~GdlVwaK~~g-~p~WPa~V~~~~~~p~~~~~~~~~~~~~~V~FFg~~~~awv~~~~l~p~~~ 72 (110)
T 2daq_A 7 GKLHYKQIVWVKLGN-YRWWPAEICNPRSVPLNIQGLKHDLGDFPVFFFGSHDYYWVHQGRVFPYVE 72 (110)
T ss_dssp CSCCSSEEEEEECSS-SCEEEEEECCTTTSCHHHHTSCCCSSCEEEEETTTTEEEEECSSSSEECCS
T ss_pred CCCCCCCEEEEEeCC-CCCCceeeCChhhCCHHHhhccCCCCcEEEEEecCCCEEEEcHHHCcCcch
Confidence 468899999999864 469999998762 134999999988889999999999964
No 55
>3qby_A Hepatoma-derived growth factor-related protein 2; HDGF2, structural genomics consortium, SGC, protein binding; HET: M3L; 1.95A {Homo sapiens} SCOP: b.34.9.2 PDB: 3qj6_A* 3eae_A 1n27_A
Probab=94.46 E-value=0.049 Score=41.19 Aligned_cols=53 Identities=19% Similarity=0.233 Sum_probs=45.1
Q ss_pred CCCCCCCeEEEEecCCCCEEEEEEeeEeC-------CeeEEEEecCCceEEEcCCCcccCC
Q 025684 52 EKLAVGTKVQAVYSEDGEWYDATIEAITP-------NGYYVTYDSWGNKEEVDPANVRPVN 105 (249)
Q Consensus 52 ~~~kvGd~ClA~ys~Dg~wY~A~I~~i~~-------~~~~V~F~~Ygn~E~V~~~~lrpl~ 105 (249)
..|++||.+.|+..+- -|-+|+|.++.. +.|.|.|.|-++...|+..+|.|+.
T Consensus 4 ~~f~~GdlVwaK~~g~-p~WPa~V~~~~~~~~k~~~~~~~V~FFGt~~~awv~~~~l~pf~ 63 (94)
T 3qby_A 4 HAFKPGDLVFAKMKGY-PHWPARIDDIADGAVKPPPNKYPIFFFGTHETAFLGPKDLFPYD 63 (94)
T ss_dssp CCCCTTCEEEECCTTS-CCEEEEECCCCTTSBCCCTTCEEEEETTTCCEEEECGGGEEEHH
T ss_pred CcCccCCEEEEecCCC-CCCCEEEeecccccccCCCCEEEEEEEcCCCcceEchhHeeEHH
Confidence 5799999999998644 477999998753 3489999999999999999999985
No 56
>1ri0_A Hepatoma-derived growth factor; HDGF, HATH domain, PWWP domain, heparin-binding, hormone/growth factor complex; NMR {Homo sapiens} SCOP: b.34.9.2 PDB: 2b8a_A 2nlu_A
Probab=94.38 E-value=0.07 Score=41.48 Aligned_cols=54 Identities=20% Similarity=0.252 Sum_probs=44.8
Q ss_pred CCCCCCCCeEEEEecCCCCEEEEEEeeEeC-------CeeEEEEecCCceEEEcCCCcccCC
Q 025684 51 QEKLAVGTKVQAVYSEDGEWYDATIEAITP-------NGYYVTYDSWGNKEEVDPANVRPVN 105 (249)
Q Consensus 51 ~~~~kvGd~ClA~ys~Dg~wY~A~I~~i~~-------~~~~V~F~~Ygn~E~V~~~~lrpl~ 105 (249)
...|.+||.|.|+..+- -|+||+|..+.. +.|.|.|-|-.+...|+..+|.|+.
T Consensus 17 ~~~~~~GdlVwaK~kGy-P~WPa~V~~~p~~~~k~~~~~~~V~FFGt~~~awv~~~~l~pf~ 77 (110)
T 1ri0_A 17 QKEYKCGDLVFAKMKGY-PHWPARIDEMPEAAVKSTANKYQVFFFGTHETAFLGPKDLFPYE 77 (110)
T ss_dssp SSSCCTTCEEEEEETTE-EEEEEEEECCCSSSSCCCSSCEEEEETTTTEEEEECSTTEECHH
T ss_pred cCCCCCCCEEEEEeCCC-CCCCEEEecccHhhcCCCCCEEEEEEecCCCEEEECHHHccchh
Confidence 35799999999998533 588999987653 3499999998888899999999985
No 57
>2qqr_A JMJC domain-containing histone demethylation protein 3A; histone lysine demethylase, tandem hybrid tudor domains, metal binding protein; 1.80A {Homo sapiens} SCOP: b.34.9.1 b.34.9.1 PDB: 2qqs_A* 2gfa_A* 2gf7_A*
Probab=94.37 E-value=0.076 Score=42.18 Aligned_cols=53 Identities=28% Similarity=0.417 Sum_probs=43.9
Q ss_pred CCCCCCCeEEEEecCCCCEEEEEEeeEeC-CeeEEEEecCCceEEEcCCCcccCCc
Q 025684 52 EKLAVGTKVQAVYSEDGEWYDATIEAITP-NGYYVTYDSWGNKEEVDPANVRPVNL 106 (249)
Q Consensus 52 ~~~kvGd~ClA~ys~Dg~wY~A~I~~i~~-~~~~V~F~~Ygn~E~V~~~~lrpl~~ 106 (249)
....+|..+..+|. ||+-|.|+..+..- ..|.|.|.| |..-++..++|..+.+
T Consensus 62 GpP~~G~~V~V~W~-DG~~y~a~f~g~~~~~~Y~V~feD-gs~~~~kR~~iyt~~E 115 (118)
T 2qqr_A 62 GPPAEGEVVQVRWT-DGQVYGAKFVASHPIQMYQVEFED-GSQLVVKRDDVYTLDE 115 (118)
T ss_dssp CCCCTTCEEEEECT-TSCEEEEEEEEEEEEEEEEEEETT-SCEEEECGGGEEETTS
T ss_pred CCCCCCCEEEEEcC-CCCEeeeEEeceeEEEEEEEEECC-CCEEEEcHHHeecccc
Confidence 36788999999997 99999999998664 359999999 7778888888877643
No 58
>3dlm_A Histone-lysine N-methyltransferase setdb1; setdb1_human, structural genomics, structural genomics consortium, SGC, alternative splicing; 1.77A {Homo sapiens}
Probab=93.99 E-value=0.079 Score=46.02 Aligned_cols=55 Identities=24% Similarity=0.457 Sum_probs=45.8
Q ss_pred CCCCCCCCCCeEEEEecCCC--CEEEEEEeeEeC--C--eeEEEEecCCceEEEcCCCcccC
Q 025684 49 DNQEKLAVGTKVQAVYSEDG--EWYDATIEAITP--N--GYYVTYDSWGNKEEVDPANVRPV 104 (249)
Q Consensus 49 ~~~~~~kvGd~ClA~ys~Dg--~wY~A~I~~i~~--~--~~~V~F~~Ygn~E~V~~~~lrpl 104 (249)
++...+.||.++.|.|.+.+ .+|.++|-+... | .|.|.|++ |-..-|+..+|+++
T Consensus 64 p~~~~l~vG~RVVA~~~~~~~~~fY~GiVaE~p~~~N~~RyLVFFDD-G~~~Yv~~~~V~~V 124 (213)
T 3dlm_A 64 PPADKLYVGSRVVAKYKDGNQVWLYAGIVAETPNVKNKLRFLIFFDD-GYASYVTQSELYPI 124 (213)
T ss_dssp CCGGGCCTTCEEEEEEECSSCEEEEEEEEEECCCTTTTSCEEEEETT-SCEEEECGGGEEEB
T ss_pred CCccEEeEEEEEEEEecCCCCcceeeeEEEECCccCCCceEEEEEeC-CCcceecCceEEEE
Confidence 34467999999999997444 599999988774 2 38999998 88999999999988
No 59
>3mp6_A MBP, SGF29, maltose-binding periplasmic protein, linker, SAGA associated factor 29; histone, tudor domain, histone binding protei; HET: MLY MAL; 1.48A {Escherichia coli} PDB: 3mp1_A* 3mp8_A*
Probab=93.87 E-value=0.084 Score=50.04 Aligned_cols=59 Identities=25% Similarity=0.308 Sum_probs=44.6
Q ss_pred CCCCCCCCCCeEEEEecCCCCEEEEEEeeEeCCe-eEEEEecCC---ceEEEcCCCcccCCch
Q 025684 49 DNQEKLAVGTKVQAVYSEDGEWYDATIEAITPNG-YYVTYDSWG---NKEEVDPANVRPVNLL 107 (249)
Q Consensus 49 ~~~~~~kvGd~ClA~ys~Dg~wY~A~I~~i~~~~-~~V~F~~Yg---n~E~V~~~~lrpl~~l 107 (249)
.+...|++|+.|||+|.+==.||+|+|......+ |.|.|.|=. ....|+..-+-|+|.+
T Consensus 453 ~~~~~~~~~~~v~a~~p~tt~fy~a~v~~~~~~~~~~~~f~~~~~~~~~~~~~~~~v~~~~~~ 515 (522)
T 3mp6_A 453 FPTKNYPPGTKVLARYPETTTFYPAIVIGTKRDGTCRLRFDGEEEVDKETEVTRRLVLPSPTA 515 (522)
T ss_dssp CCCCCCCTTCEEEEECTTCSEEEEEEEEEECTTSCEEEEETTC----CCEEECGGGEEECHHH
T ss_pred CcccCCCCCCEEEEECCCCcceEeEEEecCCCCCeEEEEecCCCCCCccccccceeEEecCch
Confidence 3456799999999999877789999999976544 999999843 2345666666666654
No 60
>1khc_A DNA cytosine-5 methyltransferase 3B2; five beta-sheets barrel followed by five-helix bundle; HET: DNA; 1.80A {Mus musculus} SCOP: b.34.9.2 PDB: 3flg_A* 3qkj_A*
Probab=93.61 E-value=0.13 Score=42.01 Aligned_cols=56 Identities=14% Similarity=0.261 Sum_probs=46.1
Q ss_pred CCCCCCCeEEEEecCCCCEEEEEEeeEeC--------CeeEEEEecCCceEEEcCCCcccCCchh
Q 025684 52 EKLAVGTKVQAVYSEDGEWYDATIEAITP--------NGYYVTYDSWGNKEEVDPANVRPVNLLV 108 (249)
Q Consensus 52 ~~~kvGd~ClA~ys~Dg~wY~A~I~~i~~--------~~~~V~F~~Ygn~E~V~~~~lrpl~~l~ 108 (249)
..|.+||.|.|+-.+- -|++|+|..... +.|.|.|-|-++...|..++|.|+....
T Consensus 10 ~~~~~GDlVWaKvkGy-PwWPa~V~~~~~~~~~~~~~~~~~V~FFG~~~~awv~~~~L~p~~~~~ 73 (147)
T 1khc_A 10 KEFGIGDLVWGKIKGF-SWWPAMVVSWKATSKRQAMPGMRWVQWFGDGKFSEISADKLVALGLFS 73 (147)
T ss_dssp SSCCTTCEEEEEETTT-EEEEEEEECGGGTTSCCCCTTEEEEEETTTCCEEEEEGGGCEETTSHH
T ss_pred ccCcCCCEEEEecCCc-CCCCEEeccchhhhcccCCCCeEEEEEecCCCEEEEcHHHCccchHHH
Confidence 5799999999998533 589999987543 3489999998889999999999986543
No 61
>3mea_A SAGA-associated factor 29 homolog; structural genomics consortium, SGC, nucleus, transcription, transcription regulation, chromosomal protein, DNA-binding; HET: M3L; 1.26A {Homo sapiens} PDB: 3meu_A* 3met_A* 3me9_A* 3mev_A* 3lx7_A 3mew_A
Probab=93.35 E-value=0.1 Score=44.27 Aligned_cols=41 Identities=22% Similarity=0.330 Sum_probs=34.5
Q ss_pred CCCCCCCCeEEEEecCCCCEEEEEEeeEeC---CeeEEEEecCC
Q 025684 51 QEKLAVGTKVQAVYSEDGEWYDATIEAITP---NGYYVTYDSWG 91 (249)
Q Consensus 51 ~~~~kvGd~ClA~ys~Dg~wY~A~I~~i~~---~~~~V~F~~Yg 91 (249)
...|..|+.|||+|-+==.||+|+|...-. +.|.|.|.|-.
T Consensus 114 ~~~f~~G~~VLAlYP~TT~FY~A~V~~~p~~~~~~y~L~FEdde 157 (180)
T 3mea_A 114 EALFQKEQLVLALYPQTTCFYRALIHAPPQRPQDDYSVLFEDTS 157 (180)
T ss_dssp GGSCCTTCEEEEECTTSSEEEEEEEEECCSSTTCCEEEEEBCTT
T ss_pred cccCCCCCEEEEeCCCCceeeEEEEecCCCCCCCcEEEEEcCCC
Confidence 457999999999998777899999998653 35999999964
No 62
>2l89_A PWWP domain-containing protein 1; histone binding, protein binding; NMR {Schizosaccharomyces pombe}
Probab=92.08 E-value=0.2 Score=38.59 Aligned_cols=53 Identities=19% Similarity=0.200 Sum_probs=42.5
Q ss_pred CCCCCCCeEEEEecCCCCEEEEEEeeEe------------CCeeEEEEecCCceEEEcCCCcccCC
Q 025684 52 EKLAVGTKVQAVYSEDGEWYDATIEAIT------------PNGYYVTYDSWGNKEEVDPANVRPVN 105 (249)
Q Consensus 52 ~~~kvGd~ClA~ys~Dg~wY~A~I~~i~------------~~~~~V~F~~Ygn~E~V~~~~lrpl~ 105 (249)
..|++||.|.|+-.+- -|+||+|.... .+.|.|.|-|=++...|+..+|.|+.
T Consensus 4 ~~~~~GdlVwaK~~gy-P~WPa~V~~~~~~p~~v~~~~~~~~~~~V~FFg~~~~aWv~~~~l~p~~ 68 (108)
T 2l89_A 4 DRLNFGDRILVKAPGY-PWWPALLLRRKETKDSLNTNSSFNVLYKVLFFPDFNFAWVKRNSVKPLL 68 (108)
T ss_dssp CCCCTTEEEEEECSSS-CEEEEEEEEEEEEESSSCSSSCEEEEEEEEETTTTEEEEECGGGEEECC
T ss_pred CcccCCCEEEEEeCCc-CCCceEecCcccCcHHHhhccCCCCeEEEEECCCCCEEEEchhhceeCC
Confidence 4799999999997533 58999996532 12389999987778899999999996
No 63
>2fhd_A RAD9 homolog, DNA repair protein RHP9/CRB2; tamdem tudor domains, cell cycle; HET: DNA MSE PO4; 2.40A {Schizosaccharomyces pombe}
Probab=92.06 E-value=0.34 Score=39.87 Aligned_cols=48 Identities=21% Similarity=0.283 Sum_probs=38.2
Q ss_pred CCeEEEEecC-CCCEEEEEEeeEeCC------eeEEEEecCCceEEEcCCCcccCC
Q 025684 57 GTKVQAVYSE-DGEWYDATIEAITPN------GYYVTYDSWGNKEEVDPANVRPVN 105 (249)
Q Consensus 57 Gd~ClA~ys~-Dg~wY~A~I~~i~~~------~~~V~F~~Ygn~E~V~~~~lrpl~ 105 (249)
-..+.|.|.+ ...||||++.....+ .|.|.|+|-... +|+.+.+|.|.
T Consensus 9 ~NrVfAff~G~p~~YYPATcvg~~~~~~~~~~~y~VrFdDs~~~-~V~~~~vk~Le 63 (153)
T 2fhd_A 9 KNRVLAFFKGYPSFYYPATLVAPVHSAVTSSIMYKVQFDDATMS-TVNSNQIKRFF 63 (153)
T ss_dssp GGEEEEECCSSSCCEEEEEEEEEECCSSCCBCEEEEEETTSCEE-EEETTSEEESC
T ss_pred cceEEEEcCCCcccccceEEEccCCCcccCCeEEEEEEcCCCCC-ccChhhceeee
Confidence 3579999963 457999999988733 399999995555 99999999885
No 64
>4fu6_A PC4 and SFRS1-interacting protein; structural genomics consortium, SGC, transcription; 2.10A {Homo sapiens} PDB: 2b8a_A 2nlu_A
Probab=91.91 E-value=0.15 Score=41.48 Aligned_cols=53 Identities=11% Similarity=0.168 Sum_probs=43.9
Q ss_pred CCCCCCCeEEEEecCCCCEEEEEEeeEeC-------CeeEEEEecCCceEEEcCCCcccCC
Q 025684 52 EKLAVGTKVQAVYSEDGEWYDATIEAITP-------NGYYVTYDSWGNKEEVDPANVRPVN 105 (249)
Q Consensus 52 ~~~kvGd~ClA~ys~Dg~wY~A~I~~i~~-------~~~~V~F~~Ygn~E~V~~~~lrpl~ 105 (249)
..|++||.|.|+..+ =-|.||+|..+.. +.|.|.|.|-.+...|+..+|.|..
T Consensus 21 ~~f~~GdlVwaK~~g-~p~WPa~V~~~~~~~~~~~~~~~~V~FfG~~~~awv~~~~l~~f~ 80 (153)
T 4fu6_A 21 RDFKPGDLIFAKMKG-YPHWPARVDEVPDGAVKPPTNKLPIFFFGTHETAFLGPKDIFPYS 80 (153)
T ss_dssp GGCCTTCEEEECCTT-SCCEEEEECCCC---CCCCTTCEEEEETTTCCEEEECGGGEEEHH
T ss_pred cCCCCCCEEEEeCCC-CCCCCEEEeEchhhccCCCCCEEEEEecCCCCeEEeCHHHccChH
Confidence 579999999999853 2588999987643 2489999999999999999999884
No 65
>1h3z_A Hypothetical 62.8 kDa protein C215.07C; nuclear protein, PWWP, chromatin, beta-barrel; NMR {Schizosaccharomyces pombe} SCOP: b.34.9.2
Probab=91.73 E-value=0.27 Score=37.71 Aligned_cols=54 Identities=15% Similarity=0.168 Sum_probs=43.9
Q ss_pred CCCCCCCeEEEEecCCCCEEEEEEee---Ee-----------CCeeEEEEecCCceEEEcCCCcccCCc
Q 025684 52 EKLAVGTKVQAVYSEDGEWYDATIEA---IT-----------PNGYYVTYDSWGNKEEVDPANVRPVNL 106 (249)
Q Consensus 52 ~~~kvGd~ClA~ys~Dg~wY~A~I~~---i~-----------~~~~~V~F~~Ygn~E~V~~~~lrpl~~ 106 (249)
..|.+||.|.|+..+- -|++|+|.. +. ...|.|.|-|-++...|+..+|.|+..
T Consensus 5 ~~~~~GdlVwaK~~gy-P~WPa~V~~p~~~~~~~~~~~~~~~~~~~~V~FFg~~~~aWv~~~~l~p~~~ 72 (109)
T 1h3z_A 5 VNYKPGMRVLTKMSGF-PWWPSMVVTESKMTSVARKSKPKRAGTFYPVIFFPNKEYLWTGSDSLTPLTS 72 (109)
T ss_dssp CCCCTTCEEEEEETTE-EEEEEEECCGGGCCHHHHHTCCCSSSCEEEEEETTTTCCEEEEGGGEEECCH
T ss_pred ccCCCCCEEEEEeCCc-CCCCEEEcccHHHhHHhhccCCCCCCCEEEEEEcCCCCEEEECHHHeeeCCc
Confidence 5799999999998533 599999983 11 245999999988889999999999963
No 66
>3llr_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase, methylysine binding, STR genomics consortium, SGC, alternative promoter usage; HET: DNA BTB; 2.30A {Homo sapiens} SCOP: b.34.9.0
Probab=91.10 E-value=0.3 Score=40.28 Aligned_cols=57 Identities=14% Similarity=0.174 Sum_probs=47.5
Q ss_pred CCCCCCCeEEEEecCCCCEEEEEEeeEe--------CCeeEEEEecCCceEEEcCCCcccCCchhH
Q 025684 52 EKLAVGTKVQAVYSEDGEWYDATIEAIT--------PNGYYVTYDSWGNKEEVDPANVRPVNLLVE 109 (249)
Q Consensus 52 ~~~kvGd~ClA~ys~Dg~wY~A~I~~i~--------~~~~~V~F~~Ygn~E~V~~~~lrpl~~l~~ 109 (249)
..|.+||.|-|+-.+ =-|.+|+|..+. .+.|.|.|-|-++...|...+|.|+....+
T Consensus 15 ~~f~~GDLVWaKvkG-~PwWPa~V~~~~~~~k~~~~~~~~~V~FFG~~~~awv~~~~L~pf~e~~e 79 (154)
T 3llr_A 15 RGFGIGELVWGKLRG-FSWWPGRIVSWWMTGRSRAAEGTRWVMWFGDGKFSVVCVEKLMPLSSFCS 79 (154)
T ss_dssp CCCCTTCEEEECCTT-SCCEEEEEECGGGTTSCCCCTTEEEEEETTTCCEEEEEGGGEEEGGGHHH
T ss_pred CCCccCCEEEEecCC-CCCCCEEEecccccccccCCCCEEEEEEeCCCCEEEEcHHHCcchhhhHH
Confidence 579999999999853 358899999864 234899999999999999999999976543
No 67
>2gfu_A DNA mismatch repair protein MSH6; PWWP domain, tudor domain, DNA binding, DNA binding protein; HET: DNA; NMR {Homo sapiens}
Probab=90.42 E-value=0.36 Score=38.42 Aligned_cols=56 Identities=13% Similarity=0.071 Sum_probs=44.2
Q ss_pred CCCCCCCCeEEEEecCCCCEEEEEEeeEeC-----------CeeEEEEecCC-ceEEEcCCCcccCCch
Q 025684 51 QEKLAVGTKVQAVYSEDGEWYDATIEAITP-----------NGYYVTYDSWG-NKEEVDPANVRPVNLL 107 (249)
Q Consensus 51 ~~~~kvGd~ClA~ys~Dg~wY~A~I~~i~~-----------~~~~V~F~~Yg-n~E~V~~~~lrpl~~l 107 (249)
...|.+||.|.|+..+- -|+||+|..... +.|.|.|-|-. +...|+..+|.|+...
T Consensus 20 ~~~~~~GdlVwaK~~g~-P~WPa~V~~~~~~~~~~~~~~~~~~~~V~FFg~~~~~aWv~~~~l~pf~~~ 87 (134)
T 2gfu_A 20 SSDFSPGDLVWAKMEGY-PWWPSLVYNHPFDGTFIREKGKSVRVHVQFFDDSPTRGWVSKRLLKPYTGS 87 (134)
T ss_dssp SCCCCTTSEEEECCTTS-CCEEEECCCCSSTTCCEEESSSCEEEEEEECSSSCEEEEECGGGEEESCCT
T ss_pred CCCCCCCCEEEEeecCC-CCCCeeecchhhhhhhhhccCCCceEEEEECCCCCceEEECHHHcccCcch
Confidence 36899999999998633 588999987531 24899998864 5789999999999643
No 68
>2biv_A SCML2 protein, sex COMB on midleg-like protein 2; MBT, malignant brain tumor, transcription factor; 1.7A {Homo sapiens} SCOP: b.34.9.3 b.34.9.3 PDB: 1oi1_A 2vyt_A* 2p0k_A
Probab=90.30 E-value=0.64 Score=40.89 Aligned_cols=56 Identities=20% Similarity=0.291 Sum_probs=43.5
Q ss_pred CCCCCCCCCeEEEEecC-CCCEEEEEEeeEeCCeeEEEEecCCce--EEEcCC--CcccCC
Q 025684 50 NQEKLAVGTKVQAVYSE-DGEWYDATIEAITPNGYYVTYDSWGNK--EEVDPA--NVRPVN 105 (249)
Q Consensus 50 ~~~~~kvGd~ClA~ys~-Dg~wY~A~I~~i~~~~~~V~F~~Ygn~--E~V~~~--~lrpl~ 105 (249)
+...|++|++..|+-.. -..++.|+|.+|.++.+.|.|+||.+. ..+..+ +|+|+-
T Consensus 168 ~~~~F~~GmKLEavD~~~p~~icvATV~~v~g~rl~v~fDgw~~~~D~W~~~dSp~I~PvG 228 (243)
T 2biv_A 168 PLNNFKVGMKLEAIDKKNPYLICPATIGDVKGDEVHITFDGWSGAFDYWCKYDSRDIFPAG 228 (243)
T ss_dssp SSCCCCTTCEEEEECTTSTTCEEEEEEEEEETTEEEEEETTSCGGGCEEEETTCTTEECTT
T ss_pred ccccccCCCEEEEEccCCCCeEEEEEEEEecCCEEEEEECCCCCcCCEEEeCCCCCeecCc
Confidence 34689999999999633 347999999999999999999999873 344443 666663
No 69
>1wjr_A KIAA1617 protein; MBT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.34.9.3
Probab=89.82 E-value=0.41 Score=38.16 Aligned_cols=56 Identities=13% Similarity=0.182 Sum_probs=44.3
Q ss_pred CCCCCCCCCeEEEEecCC-CCEEEEEEeeEeCCeeEEEEecCCce----EEE--cCCCcccCC
Q 025684 50 NQEKLAVGTKVQAVYSED-GEWYDATIEAITPNGYYVTYDSWGNK----EEV--DPANVRPVN 105 (249)
Q Consensus 50 ~~~~~kvGd~ClA~ys~D-g~wY~A~I~~i~~~~~~V~F~~Ygn~----E~V--~~~~lrpl~ 105 (249)
+...|++|+++.|.=..+ ..+..|+|.+|.+..+.|.|+||++. -.+ ...+|+|+-
T Consensus 8 p~~~f~~GmKLEa~D~~~p~~~~vAtV~~v~g~rl~l~~dG~~~~~~~D~W~~~~s~~I~PvG 70 (127)
T 1wjr_A 8 PIDLITVGSLIELQDSQNPFQYWIVSVIENVGGRLRLRYVGLEDTESYDQWLFYLDYRLRPVG 70 (127)
T ss_dssp HHHHCCTTCEEEEECSSCSSCEEEEECCCEETTEEEECBTTCSSCCSSCEEEETTCSSCBCTT
T ss_pred chhhccCCCEeEEecCCCCCcEEEEEEeeeeCCEEEEEecCCCCCCCCCEeEeCCCCCccccC
Confidence 446799999999997555 57889999999998899999999982 334 334677763
No 70
>2lcd_A AT-rich interactive domain-containing protein 4A; tudor domain, RBBP1, transcription; NMR {Homo sapiens}
Probab=88.51 E-value=0.079 Score=41.89 Aligned_cols=51 Identities=27% Similarity=0.441 Sum_probs=41.8
Q ss_pred CCCCCCCCeEEEEecCCCCEEEEEEeeEeCC-eeEEEEecCCceEEEcCCCccc
Q 025684 51 QEKLAVGTKVQAVYSEDGEWYDATIEAITPN-GYYVTYDSWGNKEEVDPANVRP 103 (249)
Q Consensus 51 ~~~~kvGd~ClA~ys~Dg~wY~A~I~~i~~~-~~~V~F~~Ygn~E~V~~~~lrp 103 (249)
...+++|..+.++.. |+.|-+|+|..|.+. .|+|.|+| |..-++...+|..
T Consensus 54 kG~l~vG~~ve~~~~-~~~~~~~~I~~i~D~S~YtVVFdD-GD~ktLrRt~lcl 105 (118)
T 2lcd_A 54 KGPLRVGAIVETRTS-DGSFQEAIISKLTDASWYTVVFDD-GDERTLRRTSLCL 105 (118)
Confidence 467999999999975 889999999999975 49999999 7766666555553
No 71
>3pfs_A Bromodomain and PHD finger-containing protein 3; structural genomics, structural genomics consortium, SGC, PW domain, protein binding; 1.90A {Homo sapiens} PDB: 3lyi_A*
Probab=83.80 E-value=3.2 Score=34.29 Aligned_cols=55 Identities=16% Similarity=0.050 Sum_probs=43.3
Q ss_pred CCCCCCCCeEEEEecCCCCEEEEEEee--E------------------------------eCCeeEEEEecC-CceEEEc
Q 025684 51 QEKLAVGTKVQAVYSEDGEWYDATIEA--I------------------------------TPNGYYVTYDSW-GNKEEVD 97 (249)
Q Consensus 51 ~~~~kvGd~ClA~ys~Dg~wY~A~I~~--i------------------------------~~~~~~V~F~~Y-gn~E~V~ 97 (249)
...|.+||.|.|+.. -=-||+|.|.. . .+..|.|.|.|= .+-..|+
T Consensus 34 ~~~~~pgdlVWAK~~-GyPwwPa~Iidp~~p~~g~~~~~v~ip~pP~~Vlk~~~~~~~~~~~~~ylV~FFd~~~t~aWV~ 112 (158)
T 3pfs_A 34 RGDLEPLELVWAKCR-GYPSYPALIIDPKMPREGLLHNGVPIPVPPLDVLKLGEQKQAEAGEKLFLVLFFDNKRTWQWLP 112 (158)
T ss_dssp CSCCCTTCEEEEECT-TSCEEEEEEECTTSCTTCEEETTEEECCCCHHHHHHHHHHHHHHTSCEEEEEECSTTCCEEEEE
T ss_pred CCCCCCCCEEEEecC-CCCCCCEEEcCCCCccccccccccccCCChHHHHhhcccccccCCCCEEEEEEcCCCCceEeec
Confidence 357999999999985 33699999975 1 022389999995 5779999
Q ss_pred CCCcccCCc
Q 025684 98 PANVRPVNL 106 (249)
Q Consensus 98 ~~~lrpl~~ 106 (249)
..+|+|+..
T Consensus 113 ~~~L~Pl~~ 121 (158)
T 3pfs_A 113 RDKVLPLGV 121 (158)
T ss_dssp GGGEEECSS
T ss_pred cccEeecCC
Confidence 999999963
No 72
>1oz2_A Lethal(3)malignant brain tumor-like protein; propeller, transcription repressor, three malignant brain TU repeats, transcription; HET: MES; 1.55A {Homo sapiens} SCOP: b.34.9.3 b.34.9.3 b.34.9.3 PDB: 1oyx_A* 1oz3_A* 3oq5_A* 2rhi_A* 2rhx_A* 2rjd_A 2rjc_A 2rje_A* 2rjf_A* 3uwn_A* 2pqw_A* 3p8h_A* 2rhu_A* 2rhy_A* 2rhz_A* 2ri3_A* 2ri2_A* 2ri5_A*
Probab=83.67 E-value=2.4 Score=38.76 Aligned_cols=56 Identities=23% Similarity=0.425 Sum_probs=43.9
Q ss_pred CCCCCCCCCeEEEEecCC-CCEEEEEEeeEeCCeeEEEEecCCce--EEEcC--CCcccCC
Q 025684 50 NQEKLAVGTKVQAVYSED-GEWYDATIEAITPNGYYVTYDSWGNK--EEVDP--ANVRPVN 105 (249)
Q Consensus 50 ~~~~~kvGd~ClA~ys~D-g~wY~A~I~~i~~~~~~V~F~~Ygn~--E~V~~--~~lrpl~ 105 (249)
+...|++|++..|+--.+ ..++.|+|.+|.++.+.|.|+||.+. -.+.. -+|.|+-
T Consensus 145 ~~~~F~vGmKLEavD~~np~~icvATV~~v~g~r~~v~~Dg~~~~~D~w~~~~S~~I~PVG 205 (331)
T 1oz2_A 145 PPLGFQVGMKLEAVDRMNPSLVCVASVTDVVDSRFLVHFDNWDDTYDYWCDPSSPYIHPVG 205 (331)
T ss_dssp CCTTCCTTCEEEEECTTSTTCEEEEEEEEEETTEEEEEETTSCGGGCEEECTTCTTEECTT
T ss_pred CccccccccEEEeccCCCCCcEEEEEEEEeeCCEEEEEeCCCCCccCEEEecCCCCccCCc
Confidence 347899999999996333 68999999999999999999999874 44444 3566663
No 73
>2biv_A SCML2 protein, sex COMB on midleg-like protein 2; MBT, malignant brain tumor, transcription factor; 1.7A {Homo sapiens} SCOP: b.34.9.3 b.34.9.3 PDB: 1oi1_A 2vyt_A* 2p0k_A
Probab=83.00 E-value=2 Score=37.67 Aligned_cols=55 Identities=22% Similarity=0.179 Sum_probs=42.9
Q ss_pred CCCCCCCCCeEEEEecCC-CCEEEEEEeeEeCCeeEEEEecCCce--EEEcC--CCcccC
Q 025684 50 NQEKLAVGTKVQAVYSED-GEWYDATIEAITPNGYYVTYDSWGNK--EEVDP--ANVRPV 104 (249)
Q Consensus 50 ~~~~~kvGd~ClA~ys~D-g~wY~A~I~~i~~~~~~V~F~~Ygn~--E~V~~--~~lrpl 104 (249)
+...|++|.+..|+-..+ +.++.|+|.+|.+..+.|.|+||.+. ..+.. .+|+|+
T Consensus 59 ~~~~f~vGmKLEa~D~~~~~~~~vATV~~v~g~~l~l~~dG~d~~~DfW~~~~S~~I~Pv 118 (243)
T 2biv_A 59 PVNDFKVGMKLEARDPRNATSVCIATVIGITGARLRLRLDGSDNRNDFWRLVDSPDIQPV 118 (243)
T ss_dssp CCCCCCTTCEEEEEETTEEEEEEEEEEEEEETTEEEEEETTSCSSSCEEEETTCTTEECT
T ss_pred CcccccCCCEEEEecCCCCCcEEEEEEEEEeCCEEEEEECCCCCCCCEeecCCCCccccC
Confidence 457899999999997432 47899999999988889999999864 34433 366666
No 74
>2r58_A Polycomb protein SCM; MBT repeat, sex COMB on midleg, DI-methyl lysine, regulator, developmental protein, metal-binding, nucleus; HET: MLY; 2.00A {Drosophila melanogaster} PDB: 2r57_A* 2r5a_A* 2r5m_A*
Probab=82.24 E-value=3 Score=37.09 Aligned_cols=54 Identities=26% Similarity=0.362 Sum_probs=42.8
Q ss_pred CCCCCCCCeEEEEecC-CCCEEEEEEeeEeCCeeEEEEecCCce--EEEcCC--CcccC
Q 025684 51 QEKLAVGTKVQAVYSE-DGEWYDATIEAITPNGYYVTYDSWGNK--EEVDPA--NVRPV 104 (249)
Q Consensus 51 ~~~~kvGd~ClA~ys~-Dg~wY~A~I~~i~~~~~~V~F~~Ygn~--E~V~~~--~lrpl 104 (249)
...|++|++..|+=-. -..++.|+|.+|.+..+.|.|+||.+. ..+..+ +|+|+
T Consensus 141 ~~~F~vGMKLEavD~~np~~icvATV~~v~g~rl~v~fDGw~~~~D~W~~~~Sp~I~Pv 199 (265)
T 2r58_A 141 ENLFKVGQKLEAVDKKNPQLICCATVDAIKDDQIHVTFDGWRGAFDYWCNYRSRDIFPA 199 (265)
T ss_dssp SCCCCTTCEEEEECTTSTTCEEEEEEEEEETTEEEEEETTSCGGGCEEEETTCTTEECT
T ss_pred ccccccCcEEEeccCCCCCCEEEEEEEEecCCEEEEEeCCCCCcCCEEEECCCCCeecC
Confidence 3579999999999532 346999999999988899999999874 445443 67777
No 75
>1oz2_A Lethal(3)malignant brain tumor-like protein; propeller, transcription repressor, three malignant brain TU repeats, transcription; HET: MES; 1.55A {Homo sapiens} SCOP: b.34.9.3 b.34.9.3 b.34.9.3 PDB: 1oyx_A* 1oz3_A* 3oq5_A* 2rhi_A* 2rhx_A* 2rjd_A 2rjc_A 2rje_A* 2rjf_A* 3uwn_A* 2pqw_A* 3p8h_A* 2rhu_A* 2rhy_A* 2rhz_A* 2ri3_A* 2ri2_A* 2ri5_A*
Probab=80.89 E-value=3 Score=38.13 Aligned_cols=54 Identities=19% Similarity=0.363 Sum_probs=42.6
Q ss_pred CCCCCCCCeEEEEecCC-CCEEEEEEeeEeCCeeEEEEecCCce--EEEcCC--CcccC
Q 025684 51 QEKLAVGTKVQAVYSED-GEWYDATIEAITPNGYYVTYDSWGNK--EEVDPA--NVRPV 104 (249)
Q Consensus 51 ~~~~kvGd~ClA~ys~D-g~wY~A~I~~i~~~~~~V~F~~Ygn~--E~V~~~--~lrpl 104 (249)
.+.|++|+++.|+=-.+ ...+.|+|.+|.+..+.|.|+||.+. ..+..+ +|.|+
T Consensus 250 ~~~F~~gmKLEavD~~~p~~ic~AtV~~v~~~~l~v~fDgw~~~~d~w~~~dS~~I~Pv 308 (331)
T 1oz2_A 250 PHSFLVNMKLEAVDRRNPALIRVASVEDVEDHRIKIHFDGWSHGYDFWIDADHPDIHPA 308 (331)
T ss_dssp CCCCCTTCEEEEECSSSTTCEEEEEEEEECSSEEEEEETTBCGGGCEEEETTCTTEECT
T ss_pred ccccccCceeEeecccCCCcEEeeEEEEEcCCEEEEEeCCCCCcCCEEEECCCCCcccc
Confidence 47899999999996322 35899999999988899999999874 455444 56665
No 76
>3l42_A Peregrin; transcription regulation, histone H3 acetylation, chromatin modification, structural genomics, structural genomics CONS SGC, activator; 1.30A {Homo sapiens} PDB: 3mo8_A* 2x4w_A* 2x35_A* 2x4x_A* 2x4y_A*
Probab=79.73 E-value=2.4 Score=34.05 Aligned_cols=54 Identities=17% Similarity=0.044 Sum_probs=41.7
Q ss_pred CCCCCCCeEEEEecCCCCEEEEEEeeEe--------------------------------CCeeEEEEecC-CceEEEcC
Q 025684 52 EKLAVGTKVQAVYSEDGEWYDATIEAIT--------------------------------PNGYYVTYDSW-GNKEEVDP 98 (249)
Q Consensus 52 ~~~kvGd~ClA~ys~Dg~wY~A~I~~i~--------------------------------~~~~~V~F~~Y-gn~E~V~~ 98 (249)
..+.+||.|-|+.. --=||+|.|..-. +..|.|.|-|= .+-..|+.
T Consensus 4 ~~~~~~dlVWAK~~-gyP~wPa~Iidp~~p~~g~~~~g~~ip~pP~~Vl~~~~~~~~~~~~~~y~V~FFd~~~t~aWv~~ 82 (130)
T 3l42_A 4 SPLDALDLVWAKCR-GYPSYPALIIDPKMPREGMFHHGVPIPVPPLEVLKLGEQMTQEAREHLYLVLFFDNKRTWQWLPR 82 (130)
T ss_dssp SSSCTTCEEEECCT-TSCCEEEEEECTTSCTTCEEETTEEECCCCHHHHHHHHHHHHHCSSCEEEEEESSTTCCEEEEEG
T ss_pred ccCCCCCEEEEecc-cCCCCCEEEcCCCCccccccccCccCCCChHHHHhhcccccccCCCcEEEEEeCCCCCceEeecc
Confidence 46899999999985 2249999996511 12389999884 56799999
Q ss_pred CCcccCCc
Q 025684 99 ANVRPVNL 106 (249)
Q Consensus 99 ~~lrpl~~ 106 (249)
.+|+|+..
T Consensus 83 ~~i~pl~~ 90 (130)
T 3l42_A 83 TKLVPLGV 90 (130)
T ss_dssp GGEEESSS
T ss_pred cceeecCC
Confidence 99999964
No 77
>2lcd_A AT-rich interactive domain-containing protein 4A; tudor domain, RBBP1, transcription; NMR {Homo sapiens}
Probab=79.50 E-value=0.44 Score=37.62 Aligned_cols=49 Identities=27% Similarity=0.346 Sum_probs=38.5
Q ss_pred CCCCCCCeEEEEecCCCCEEEEEEeeEeCC-eeEEEEecCCceEEEcCCCcc
Q 025684 52 EKLAVGTKVQAVYSEDGEWYDATIEAITPN-GYYVTYDSWGNKEEVDPANVR 102 (249)
Q Consensus 52 ~~~kvGd~ClA~ys~Dg~wY~A~I~~i~~~-~~~V~F~~Ygn~E~V~~~~lr 102 (249)
..+.||..+.|+| -|-|++|+|..++.. .|.|.|..=....+|+-++|+
T Consensus 5 p~L~VGTeVSAKy--rGAFCEAkIk~V~r~vKcKV~~k~~~~~~~v~d~~ik 54 (118)
T 2lcd_A 5 AYLTVGTDVSAKY--RGAFCEAKIKTVKRLVKVKVLLKQDNTTQLVQDDQVK 54 (118)
Confidence 4688999999999 689999999999876 489999874445556555554
No 78
>3ask_A E3 ubiquitin-protein ligase UHRF1; histone reader modules, epigenetic regulation, trimethylaion of lysine residue, ligase-DNA binding protein; HET: M3L; 2.90A {Homo sapiens}
Probab=77.34 E-value=2.2 Score=37.20 Aligned_cols=30 Identities=40% Similarity=0.650 Sum_probs=26.0
Q ss_pred CCCCCCCeEEEEec-----CCCCEEEEEEeeEeCC
Q 025684 52 EKLAVGTKVQAVYS-----EDGEWYDATIEAITPN 81 (249)
Q Consensus 52 ~~~kvGd~ClA~ys-----~Dg~wY~A~I~~i~~~ 81 (249)
..+.+|+.+|+-|. .+|.||.|.|+.+...
T Consensus 74 ~~l~~g~~vm~nyn~~~~~~~G~~y~~~I~~~~~~ 108 (226)
T 3ask_A 74 QDLEVGQVVMLNYNPDNPKERGFWYDAEISRKRET 108 (226)
T ss_dssp GGCCTTCEEEEEECTTSTTSCCEEEEEEEEEEEEC
T ss_pred cccccCcEEEEecccCCccccCceeehhhhhhhhc
Confidence 56799999999992 4999999999998854
No 79
>3d0f_A Penicillin-binding 1 transmembrane protein MRCA; BIG_1156.2, STR genomics, PSI-2, protein structure initiative; 1.64A {Nitrosomonas europaea atcc 19718}
Probab=76.92 E-value=2.8 Score=31.53 Aligned_cols=37 Identities=11% Similarity=0.188 Sum_probs=28.6
Q ss_pred CCCEEEEEEeeEeCCeeEEEEecCCceEEEcCCCcccC
Q 025684 67 DGEWYDATIEAITPNGYYVTYDSWGNKEEVDPANVRPV 104 (249)
Q Consensus 67 Dg~wY~A~I~~i~~~~~~V~F~~Ygn~E~V~~~~lrpl 104 (249)
.|.||+|+|++++++.+.|.+.+ |....|+.+.++-.
T Consensus 33 ~~~~~~AvV~~v~~~~~~v~~~~-g~~~~l~~~~~~WA 69 (106)
T 3d0f_A 33 SDDILAAVVLSATPGAVEAFRKN-GETIRITGDGLKAA 69 (106)
T ss_dssp TTTCEEEEEEEEETTEEEEEETT-SCEEEECGGGGSTT
T ss_pred cCCeEEEEEEEeCCCeEEEEEcC-CCeEEEcHHHChhh
Confidence 46799999999999999998866 45555877666643
No 80
>2e6z_A Transcription elongation factor SPT5; KOW motif, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=76.75 E-value=5.9 Score=27.03 Aligned_cols=50 Identities=12% Similarity=0.106 Sum_probs=37.6
Q ss_pred CCCCCCCeEEEEecCCCCEEEEEEeeEeCCeeEEEEe--cCCceEEEcCCCcc
Q 025684 52 EKLAVGTKVQAVYSEDGEWYDATIEAITPNGYYVTYD--SWGNKEEVDPANVR 102 (249)
Q Consensus 52 ~~~kvGd~ClA~ys~Dg~wY~A~I~~i~~~~~~V~F~--~Ygn~E~V~~~~lr 102 (249)
..|.+||.+... +++=.=+.|+|++|+.+.+.|.-. +....-++++++|+
T Consensus 6 ~~f~~GD~V~V~-~Gpf~g~~G~V~evd~e~v~V~v~~fg~~tpvel~~~qv~ 57 (59)
T 2e6z_A 6 SGFQPGDNVEVC-EGELINLQGKILSVDGNKITIMPKHEDLKDMLEFPAQELR 57 (59)
T ss_dssp SSCCTTSEEEEC-SSTTTTCEEEECCCBTTEEEEEECCSSCCSCEEEETTTEE
T ss_pred ccCCCCCEEEEe-ecCCCCCEEEEEEEeCCEEEEEEEecCCCceEEEcHHHEE
Confidence 579999999998 344445899999999887777776 45455667777765
No 81
>2r58_A Polycomb protein SCM; MBT repeat, sex COMB on midleg, DI-methyl lysine, regulator, developmental protein, metal-binding, nucleus; HET: MLY; 2.00A {Drosophila melanogaster} PDB: 2r57_A* 2r5a_A* 2r5m_A*
Probab=76.29 E-value=4.4 Score=36.02 Aligned_cols=55 Identities=11% Similarity=0.110 Sum_probs=42.2
Q ss_pred CCCCCCCCCeEEEEecCCC-CEEEEEEeeEeCCeeEEEEecCCce--EEEc--CCCcccC
Q 025684 50 NQEKLAVGTKVQAVYSEDG-EWYDATIEAITPNGYYVTYDSWGNK--EEVD--PANVRPV 104 (249)
Q Consensus 50 ~~~~~kvGd~ClA~ys~Dg-~wY~A~I~~i~~~~~~V~F~~Ygn~--E~V~--~~~lrpl 104 (249)
+...|++|++..|+=..+- .++.|+|.+|.+..+.|.|+||.+. -.+. ..+|.|+
T Consensus 31 ~~~~F~vGMKLEavDp~~~~~icvATV~~v~g~~l~l~~DG~d~~~DfW~~~~S~~I~Pv 90 (265)
T 2r58_A 31 PNNDFKIGMKLEALDPRNVTSTCIATVVGVLGSRLRLRLDGSDSQNDFWRLVDSTEIHAI 90 (265)
T ss_dssp CCCCCCTTCEEEEEETTEEEEEEEEEEEEEETTEEEEEETTSCSSCCEEEETTCTTEECT
T ss_pred CccccccCCEeEEecCCCCCCEEEEEEEEEeCCEEEEEeCCCCCcCCEeEeCCCCCeecc
Confidence 3578999999999964332 4899999999999899999999754 3333 3466666
No 82
>3db3_A E3 ubiquitin-protein ligase UHRF1; cell cycle, DNA damage, DNA repair, tandem tudor domains, LI metal binding, DNA replication; HET: M3L; 2.40A {Homo sapiens} PDB: 3db4_A 2l3r_A*
Probab=72.54 E-value=3.8 Score=33.98 Aligned_cols=29 Identities=38% Similarity=0.620 Sum_probs=24.7
Q ss_pred CCCCCCCeEEEEecC-----CCCEEEEEEeeEeC
Q 025684 52 EKLAVGTKVQAVYSE-----DGEWYDATIEAITP 80 (249)
Q Consensus 52 ~~~kvGd~ClA~ys~-----Dg~wY~A~I~~i~~ 80 (249)
..+.||+.+|+=|.. =|-||+|.|+.+..
T Consensus 91 ~~L~vGqvVMvNYN~d~PkerGfWYDaeI~~~~~ 124 (161)
T 3db3_A 91 QDLEVGQVVMLNYNPDNPKERGFWYDAEISRKRE 124 (161)
T ss_dssp GGCCTTCEEEEEECSSSTTSCCEEEEEEEEEEEE
T ss_pred HHCCcCcEEEEecCCCCccccceeEEEEEeeehh
Confidence 568999999999964 47799999999864
No 83
>3h6z_A Polycomb protein SFMBT; MBT, MBR repeat, aromatic CAGE, chromatin regulator, DNA-BIN metal-binding, nucleus, repressor, transcription; HET: MLZ SUC; 2.80A {Drosophila melanogaster}
Probab=70.92 E-value=8.1 Score=36.72 Aligned_cols=55 Identities=18% Similarity=0.305 Sum_probs=43.3
Q ss_pred CCCCCCCCCeEEEEec-CCCCEEEEEEeeEeCCeeEEEEecCCce--EEEcCC--CcccC
Q 025684 50 NQEKLAVGTKVQAVYS-EDGEWYDATIEAITPNGYYVTYDSWGNK--EEVDPA--NVRPV 104 (249)
Q Consensus 50 ~~~~~kvGd~ClA~ys-~Dg~wY~A~I~~i~~~~~~V~F~~Ygn~--E~V~~~--~lrpl 104 (249)
+...|++|++..|+=- .-+....|+|..|.+..+.|.|+||.+. ..+..+ +|.|+
T Consensus 373 ~~~~F~~gmkLEAvD~~np~~icvATV~~v~~~~~~i~fDgw~~~~d~w~~~~S~dI~Pv 432 (447)
T 3h6z_A 373 PDHGFEVGMSLECADLMDPRLVCVATVARVVGRLLKVHFDGWTDEYDQWLDCESADIYPV 432 (447)
T ss_dssp CCCCCCTTCEEEEECTTSTTCEEEEEEEEEETTEEEEECTTSCGGGCEEEETTCTTEECT
T ss_pred CCCccccCCEEEeecCCCCCcEEEEEEeEecCCEEEEEeCCCCCcCCEEEecCCCCcccc
Confidence 4578999999999852 2346899999999998899999999983 455443 66666
No 84
>3f70_A Lethal(3)malignant brain tumor-like 2 protein; MBT, chromatin regulator, metal-binding, nucleus, transcript transcription regulation, zinc-finger; HET: MLZ; 2.10A {Homo sapiens} PDB: 3dbb_A* 3cey_A
Probab=69.33 E-value=11 Score=35.90 Aligned_cols=56 Identities=23% Similarity=0.365 Sum_probs=43.0
Q ss_pred CCCCCCCCCeEEEEecC-CCCEEEEEEeeEeCCeeEEEEecCCce--EEEc--CCCcccCC
Q 025684 50 NQEKLAVGTKVQAVYSE-DGEWYDATIEAITPNGYYVTYDSWGNK--EEVD--PANVRPVN 105 (249)
Q Consensus 50 ~~~~~kvGd~ClA~ys~-Dg~wY~A~I~~i~~~~~~V~F~~Ygn~--E~V~--~~~lrpl~ 105 (249)
+...|++|++..|+=-- -+..+.|+|..|.+..+.|.|+||... ..+. .-+|.|+-
T Consensus 363 ~~~~F~~GMKLEAvD~~np~~icvATV~~v~~~~l~i~fDgw~~~~d~w~~~~S~~I~PvG 423 (456)
T 3f70_A 363 PNHGFKVGMKLEAVDLMEPRLICVATVKRVVHRLLSIHFDGWDSEYDQWVDCESPDIYPVG 423 (456)
T ss_dssp CCCCCCTTCEEEEECTTSTTCEEEEEEEEEETTEEEEEETTSCGGGCEEEETTCTTEECTT
T ss_pred CccccccCCEEEeecCCCCCcEEEEEEEEecCCEEEEEeCCCCCCCCeEeecCCCCccccc
Confidence 34679999999999632 346889999999988789999999963 4443 34777774
No 85
>3feo_A MBT domain-containing protein 1; MBTL1, structural genomics, structural genomics consortium, metal-binding, nucleus, zinc-finger; 2.50A {Homo sapiens}
Probab=68.67 E-value=10 Score=35.87 Aligned_cols=56 Identities=27% Similarity=0.362 Sum_probs=42.8
Q ss_pred CCCCCCCCCeEEEEe-cCCCCEEEEEEeeEeCCeeEEEEecCCce--EEEcC--CCcccCC
Q 025684 50 NQEKLAVGTKVQAVY-SEDGEWYDATIEAITPNGYYVTYDSWGNK--EEVDP--ANVRPVN 105 (249)
Q Consensus 50 ~~~~~kvGd~ClA~y-s~Dg~wY~A~I~~i~~~~~~V~F~~Ygn~--E~V~~--~~lrpl~ 105 (249)
+.+.|++|++..|+= ..-.....|+|..|.+..+.|.|+||.+. ..+.. -+|.|+-
T Consensus 359 ~~~~F~~GMKLEAvD~~np~~IcvATV~~v~~~~l~v~fDgw~~~~d~w~~~~S~~I~PvG 419 (437)
T 3feo_A 359 PNHGFRVGMKLEAVDLMEPRLICVATVTRIIHRLLRIHFDGWEEEYDQWVDCESPDLYPVG 419 (437)
T ss_dssp CCCCCCTTCEEEEECTTSTTCEEEEEEEEEETTEEEEEETTSCGGGCEEEETTCTTEECTT
T ss_pred ccccCccCCEEEeecCCCCCcEEEEEEeEEcCCEEEEEECCCCCcCCeEEeCCCCCcccCc
Confidence 447899999999996 22346899999999988789999999863 34433 4666663
No 86
>3ut1_A Lethal(3)malignant brain tumor-like protein 3; chromatin modification, transcription repression, MBT repeat structural genomics; HET: EPE; 2.05A {Homo sapiens} PDB: 4fl6_A* 1wjs_A
Probab=67.24 E-value=11 Score=34.24 Aligned_cols=56 Identities=20% Similarity=0.248 Sum_probs=42.8
Q ss_pred CCCCCCCCCeEEEEec-CCCCEEEEEEeeEeCCeeEEEEecCCce--EEEcC--CCcccCC
Q 025684 50 NQEKLAVGTKVQAVYS-EDGEWYDATIEAITPNGYYVTYDSWGNK--EEVDP--ANVRPVN 105 (249)
Q Consensus 50 ~~~~~kvGd~ClA~ys-~Dg~wY~A~I~~i~~~~~~V~F~~Ygn~--E~V~~--~~lrpl~ 105 (249)
+.+.|++|+++.|+=. .-.....|+|..|.+..+.|.|+||... ..+.. -+|.|+-
T Consensus 244 ~~~~F~~gmkLEAvD~~~p~licvATV~~v~g~~l~v~fDgw~~~~d~w~~~~S~dI~PvG 304 (324)
T 3ut1_A 244 PPHGFQKKMKLEVVDKRNPMFIRVATVADTDDHRVKVHFDGWNNCYDYWIDADSPDIHPVG 304 (324)
T ss_dssp CCCCCCTTCEEEEECSSSTTCEEEEEEEEECSSEEEEEETTSCGGGCEEEETTCTTEECTT
T ss_pred ccccCCCCCeeeccCCCCCCceeEEEEEEecCCEEEEEeCCCCCCCCEEEeCCCCCeecee
Confidence 3478999999999952 2335789999999988899999999873 34444 3666663
No 87
>3ut1_A Lethal(3)malignant brain tumor-like protein 3; chromatin modification, transcription repression, MBT repeat structural genomics; HET: EPE; 2.05A {Homo sapiens} PDB: 4fl6_A* 1wjs_A
Probab=66.63 E-value=8.2 Score=35.10 Aligned_cols=54 Identities=24% Similarity=0.451 Sum_probs=40.7
Q ss_pred CCCCCCCCeEEEEecCC-CCEEEEEEeeEeCCeeEEEEecCCce--EEEc--CCCcccC
Q 025684 51 QEKLAVGTKVQAVYSED-GEWYDATIEAITPNGYYVTYDSWGNK--EEVD--PANVRPV 104 (249)
Q Consensus 51 ~~~~kvGd~ClA~ys~D-g~wY~A~I~~i~~~~~~V~F~~Ygn~--E~V~--~~~lrpl 104 (249)
.+.|++|++..|+=-.+ ...+.|+|..|.++.+.|.|+||.+. -.+. .-+|.|+
T Consensus 141 ~~~F~vGMKLEavDp~~p~~icvATV~~V~g~~l~v~~Dg~~~~~d~w~~~~Sp~I~PV 199 (324)
T 3ut1_A 141 PSGFRVGMKLEAVDKKNPSFICVATVTDMVDNRFLVHFDNWDESYDYWCEASSPHIHPV 199 (324)
T ss_dssp CCSCCTTCEEEEEETTEEEEEEEEEEEEEETTEEEEEETTSCGGGCEEECTTCTTEECT
T ss_pred ccccccCCEEEEecCCCCCcEEEEEEEEEECCEEEEEECCCCCcCCEEEECCCCCcccC
Confidence 36799999999996322 34789999999998899999999763 2332 3355665
No 88
>2egv_A UPF0088 protein AQ_165; RSME, methyltransferase, rRNA modification, PUA domain, M3U, SAM, structural genomics, NPPSFA; HET: SAM; 1.45A {Aquifex aeolicus} PDB: 2egw_A*
Probab=62.71 E-value=8.5 Score=32.97 Aligned_cols=36 Identities=6% Similarity=0.099 Sum_probs=29.9
Q ss_pred CCCCCCCeEEEEecCCCCEEEEEEeeEeCCeeEEEEec
Q 025684 52 EKLAVGTKVQAVYSEDGEWYDATIEAITPNGYYVTYDS 89 (249)
Q Consensus 52 ~~~kvGd~ClA~ys~Dg~wY~A~I~~i~~~~~~V~F~~ 89 (249)
...++||.+.. .++|.+|.|+|..++.+.+.+....
T Consensus 27 lRl~~Gd~v~l--dg~g~~~~a~i~~~~~~~~~~~i~~ 62 (229)
T 2egv_A 27 RRIEKDEEFGV--IHEGKIYVCKVRREDKREISCEIVE 62 (229)
T ss_dssp TTCCTTCCEEE--EETTEEEEEEEEEECSSEEEEEEEE
T ss_pred hcCCCCCEEEE--eCCCCEEEEEEEEecCCEEEEEEEE
Confidence 56899999988 6799999999999998876655554
No 89
>1vhy_A Hypothetical protein HI0303; PSI, protein structure initiative, NEW YORK SGX research CEN structural genomics, nysgxrc; HET: MSE; 1.90A {Haemophilus influenzae} SCOP: b.122.1.2 c.116.1.5 PDB: 1nxz_A
Probab=61.06 E-value=12 Score=32.55 Aligned_cols=37 Identities=14% Similarity=0.155 Sum_probs=30.6
Q ss_pred CCCCCCCeEEEEecCCCCEEEEEEeeEeCCeeEEEEec
Q 025684 52 EKLAVGTKVQAVYSEDGEWYDATIEAITPNGYYVTYDS 89 (249)
Q Consensus 52 ~~~kvGd~ClA~ys~Dg~wY~A~I~~i~~~~~~V~F~~ 89 (249)
...++||.+... .++|.+|.|+|..++.+.+.+....
T Consensus 34 LRl~~Gd~v~l~-dg~g~~~~a~I~~~~~~~~~~~i~~ 70 (257)
T 1vhy_A 34 LRMTEGEQLELF-DGSNHIYPAKIIESNKKSVKVEILG 70 (257)
T ss_dssp SCCCTTCEEEEE-CSSSEEEEEEEEEECSSCEEEEECC
T ss_pred hccCCCCEEEEE-cCCCCEEEEEEEEeeCCeEEEEEEE
Confidence 578999998774 7789999999999998877666654
No 90
>1vhk_A Hypothetical protein YQEU; structural genomics, unknown function; 2.60A {Bacillus subtilis} SCOP: b.122.1.2 c.116.1.5
Probab=58.40 E-value=18 Score=31.77 Aligned_cols=37 Identities=11% Similarity=0.169 Sum_probs=30.4
Q ss_pred CCCCCCCeEEEEecCCCCEEEEEEeeEeCCeeEEEEec
Q 025684 52 EKLAVGTKVQAVYSEDGEWYDATIEAITPNGYYVTYDS 89 (249)
Q Consensus 52 ~~~kvGd~ClA~ys~Dg~wY~A~I~~i~~~~~~V~F~~ 89 (249)
...++||.+... .++|.+|.|+|..++.+.+.+....
T Consensus 35 LRl~~Gd~i~l~-dg~G~~~~a~I~~~~~~~~~~~i~~ 71 (268)
T 1vhk_A 35 MRMNEGDQIICC-SQDGFEAKCELQSVSKDKVSCLVIE 71 (268)
T ss_dssp TCCCTTCEEEEE-CTTSCEEEEEEEEECSSEEEEEEEE
T ss_pred hcCCCCCEEEEE-eCCCCEEEEEEEEecCCEEEEEEEE
Confidence 578999998775 6799999999999998876665554
No 91
>3cgm_A SLYD, peptidyl-prolyl CIS-trans isomerase; chaperone function, two domain P rotamase; 2.41A {Thermus thermophilus} PDB: 3cgn_A 3luo_A*
Probab=57.00 E-value=17 Score=29.31 Aligned_cols=35 Identities=17% Similarity=0.230 Sum_probs=28.8
Q ss_pred CCCCCCCeEEEEecCCCCEEEEEEeeEeCCeeEEEE
Q 025684 52 EKLAVGTKVQAVYSEDGEWYDATIEAITPNGYYVTY 87 (249)
Q Consensus 52 ~~~kvGd~ClA~ys~Dg~wY~A~I~~i~~~~~~V~F 87 (249)
..|.+|+.+... .+||+-++++|.+|+++.++|-|
T Consensus 83 ~~~~~G~~~~~~-~~~G~~~~~~V~~v~~~~v~vD~ 117 (158)
T 3cgm_A 83 AEVVPGAQFYAQ-DMEGNPMPLTVVAVEGEEVTVDF 117 (158)
T ss_dssp SCCCTTCEEEEE-ETTTEEEEEEEEEEETTEEEEEC
T ss_pred CCCccCCEEEEE-CCCCCEEEEEEEEECCCEEEEeC
Confidence 479999999876 56899999999999998665544
No 92
>4e8b_A Ribosomal RNA small subunit methyltransferase E; 16S rRNA methyltransferase; 2.25A {Escherichia coli}
Probab=56.38 E-value=18 Score=31.40 Aligned_cols=37 Identities=16% Similarity=0.217 Sum_probs=30.0
Q ss_pred CCCCCCCeEEEEecCCCCEEEEEEeeEeCCeeEEEEec
Q 025684 52 EKLAVGTKVQAVYSEDGEWYDATIEAITPNGYYVTYDS 89 (249)
Q Consensus 52 ~~~kvGd~ClA~ys~Dg~wY~A~I~~i~~~~~~V~F~~ 89 (249)
...++||.+... .++|..|.|+|.+++.+.+.+....
T Consensus 32 LR~~~Gd~v~l~-dg~g~~~~a~I~~i~~~~~~~~i~~ 68 (251)
T 4e8b_A 32 LRMGPGQALQLF-DGSNQVFDAEITSASKKSVEVKVLE 68 (251)
T ss_dssp SCCCSCCEEEEE-CSSSEEEEEEEEEECSSCEEEEEEE
T ss_pred CcCCCCCEEEEE-eCCCcEEEEEEEEeecceEEEEEee
Confidence 568999999875 6789999999999998876655543
No 93
>1z85_A Hypothetical protein TM1380; alpha/beta knot fold, structural genomics, joint center for structural genomics, JCSG; 2.12A {Thermotoga maritima}
Probab=56.18 E-value=17 Score=31.38 Aligned_cols=37 Identities=14% Similarity=0.209 Sum_probs=29.8
Q ss_pred CCCCCCCeEEEEecCCCCEEEEEEeeEeCCeeEEEEec
Q 025684 52 EKLAVGTKVQAVYSEDGEWYDATIEAITPNGYYVTYDS 89 (249)
Q Consensus 52 ~~~kvGd~ClA~ys~Dg~wY~A~I~~i~~~~~~V~F~~ 89 (249)
...++||.+... .++|.+|.|+|..++.+.+.+....
T Consensus 39 LRl~~Gd~v~l~-dg~G~~~~a~I~~~~~~~~~~~i~~ 75 (234)
T 1z85_A 39 VRLKEGDVIEAT-DGNGFSYTCILKSLKKKTAAAKIVK 75 (234)
T ss_dssp TTCCTTCEEEEE-CSBSEEEEEEEEEECSSCEEEEEEE
T ss_pred hcCCCCCEEEEE-eCCCCEEEEEEEEecCCEEEEEEEE
Confidence 578999998775 6789999999999998776555543
No 94
>3pmi_A PWWP domain-containing protein MUM1; structural genomics consortium, SGC, protein binding, nucLeu; HET: UNL; 2.82A {Homo sapiens}
Probab=55.50 E-value=22 Score=28.41 Aligned_cols=53 Identities=13% Similarity=0.117 Sum_probs=42.2
Q ss_pred CCCCCCCeEEEEecCCCCEEEEEEeeEeC--CeeEEEEecCCce-----EEEcCCCcccCC
Q 025684 52 EKLAVGTKVQAVYSEDGEWYDATIEAITP--NGYYVTYDSWGNK-----EEVDPANVRPVN 105 (249)
Q Consensus 52 ~~~kvGd~ClA~ys~Dg~wY~A~I~~i~~--~~~~V~F~~Ygn~-----E~V~~~~lrpl~ 105 (249)
..+..|..+-.+|. |--|.||+|.+|.- ....|.|++=.-. -.|++.+|+|++
T Consensus 3 ~~~e~GmlVW~K~q-~yPfWPAVVKSV~r~ekkA~VL~Ie~~m~~ekrGi~V~LrrLK~fD 62 (134)
T 3pmi_A 3 RSFEVGMLVWHKHK-KYPFWPAVVKSVRQRDKKASVLYIEGHMNPKMKGFTVSLKSLKHFD 62 (134)
T ss_dssp -CCCTTCEEEECCT-TSCCEEEEEEEEEGGGTEEEEEECCSSCCTTSCCEEEEGGGCEETT
T ss_pred cccccceEEEEEec-cCCCcchheeeeeeccceEEEEEEeCCCCcccCceEeEcccCCCCC
Confidence 45788999999986 66788999999984 3589999983321 469999999996
No 95
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A
Probab=54.85 E-value=20 Score=37.61 Aligned_cols=53 Identities=15% Similarity=0.134 Sum_probs=44.6
Q ss_pred CCCCCCeEEEEecCCCCEEEEEEeeEeCCeeEEEEecCCceEEEcCCCcccCCc
Q 025684 53 KLAVGTKVQAVYSEDGEWYDATIEAITPNGYYVTYDSWGNKEEVDPANVRPVNL 106 (249)
Q Consensus 53 ~~kvGd~ClA~ys~Dg~wY~A~I~~i~~~~~~V~F~~Ygn~E~V~~~~lrpl~~ 106 (249)
.|..|+.|-..- ++..|-.|+|.+..++.+.|...+-|...+|+.++|.|+++
T Consensus 27 ~~~~~~~vw~~~-~~~~~~~~~v~~~~~~~~~v~~~~~~~~~~~~~~~~~~~n~ 79 (1184)
T 1i84_S 27 DWSAKKLVWVPS-EKHGFEAASIKEEKGDEVTVELQENGKKVTLSKDDIQKMNP 79 (1184)
T ss_dssp HTTCTTEEEECC-TTTSSEEEEEEEEETTEEEEEETTTCCEEEEETTSCEECCC
T ss_pred CcccCCeEEEEC-CCCCeEEEEEEEecCCeEEEEEcCCCcEEEeeHHHccCCCC
Confidence 599999996653 35679999999999888999998889889999999988753
No 96
>3kw2_A Probable R-RNA methyltransferase; structural genomics, unknown function, PSI-2, protein structure initiative; HET: MSE ADN; 2.00A {Porphyromonas gingivalis atcc 33277}
Probab=52.75 E-value=20 Score=31.25 Aligned_cols=37 Identities=22% Similarity=0.469 Sum_probs=30.0
Q ss_pred CCCCCCCeEEEEecCCCCEEEEEEeeEeCCeeEEEEec
Q 025684 52 EKLAVGTKVQAVYSEDGEWYDATIEAITPNGYYVTYDS 89 (249)
Q Consensus 52 ~~~kvGd~ClA~ys~Dg~wY~A~I~~i~~~~~~V~F~~ 89 (249)
...++||.+... .++|..|.|+|.+++.+.+.+....
T Consensus 31 LRl~~Gd~v~l~-dg~g~~~~a~I~~i~~~~~~~~i~~ 67 (257)
T 3kw2_A 31 LRMQAGDRLRLT-DGRGSFFDAVIETADRKSCYVSVCG 67 (257)
T ss_dssp SCCCTTCEEEEE-CSBSEEEEEEEEEECSSCEEEEEEE
T ss_pred ccCCCCCEEEEE-ECCCCEEEEEEEEeeCCEEEEEEEE
Confidence 568999999886 5688999999999998876665544
No 97
>3feo_A MBT domain-containing protein 1; MBTL1, structural genomics, structural genomics consortium, metal-binding, nucleus, zinc-finger; 2.50A {Homo sapiens}
Probab=52.35 E-value=16 Score=34.47 Aligned_cols=55 Identities=20% Similarity=0.276 Sum_probs=40.0
Q ss_pred CCCCCCCCeEEEEecC-CCCEEEEEEeeEeCCee-EEEEecCCceE-------EEcCCCcccCC
Q 025684 51 QEKLAVGTKVQAVYSE-DGEWYDATIEAITPNGY-YVTYDSWGNKE-------EVDPANVRPVN 105 (249)
Q Consensus 51 ~~~~kvGd~ClA~ys~-Dg~wY~A~I~~i~~~~~-~V~F~~Ygn~E-------~V~~~~lrpl~ 105 (249)
.+.|++|++..|+=.. =.....|+|.+|.+++| .|.|+|+.+.+ .+..-.|.|+-
T Consensus 252 ~~~F~~GMKLEavDp~~p~~icvATV~~v~~~g~l~l~~Dg~~~~~~~d~~~~h~~Sp~I~PVG 315 (437)
T 3feo_A 252 GEWFKEGMKLEAIDPLNLSTICVATIRKVLADGFLMIGIDGSEAADGSDWFCYHATSPSIFPVG 315 (437)
T ss_dssp SSCCCTTCEEEEEETTEEEEEEEEEEEEECGGGEEEEEETTCCC-CCTTCEEEETTCTTEECTT
T ss_pred ccccccCCEEEEEcCCCCceEEEEEEEEEccCCEEEEEeCCCCCCCCCCeEEeeCCCCCcccch
Confidence 3569999999999622 23588999999987665 79999997654 23445677764
No 98
>2kr7_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLY; protein, rotamase; NMR {Helicobacter pylori}
Probab=52.22 E-value=25 Score=27.92 Aligned_cols=36 Identities=25% Similarity=0.335 Sum_probs=29.2
Q ss_pred CCCCCCCeEEEEecCCCCEEEEEEeeEeCCeeEEEEe
Q 025684 52 EKLAVGTKVQAVYSEDGEWYDATIEAITPNGYYVTYD 88 (249)
Q Consensus 52 ~~~kvGd~ClA~ys~Dg~wY~A~I~~i~~~~~~V~F~ 88 (249)
..+.+|+.+.+. ..||+-++++|.+|+++.++|=|-
T Consensus 92 ~~~~~G~~~~~~-~~~G~~~~~~V~~v~~~~v~vD~N 127 (151)
T 2kr7_A 92 IELEKGMSVFGQ-TEDNQTIQAIIKDFSATHVMVDYN 127 (151)
T ss_dssp SCCCTTCEEEEE-ETTTEEEEEEEEEECSSEEEEEEC
T ss_pred CCCccCCEEEEE-CCCCCEEEEEEEEECCCEEEEECC
Confidence 468999999987 568988999999999886665443
No 99
>3mea_A SAGA-associated factor 29 homolog; structural genomics consortium, SGC, nucleus, transcription, transcription regulation, chromosomal protein, DNA-binding; HET: M3L; 1.26A {Homo sapiens} PDB: 3meu_A* 3met_A* 3me9_A* 3mev_A* 3lx7_A 3mew_A
Probab=50.97 E-value=37 Score=28.39 Aligned_cols=58 Identities=21% Similarity=0.195 Sum_probs=42.0
Q ss_pred CCCCCCCCCCeEEEEec---CCCCEEEEEEeeEeCC--eeEEEEecCCce--EEEcCCCcccCCc
Q 025684 49 DNQEKLAVGTKVQAVYS---EDGEWYDATIEAITPN--GYYVTYDSWGNK--EEVDPANVRPVNL 106 (249)
Q Consensus 49 ~~~~~~kvGd~ClA~ys---~Dg~wY~A~I~~i~~~--~~~V~F~~Ygn~--E~V~~~~lrpl~~ 106 (249)
.+...+++||.|.|+-. +++.|--|.|..+.++ .|.|.=.+=... -.++..+|-|||.
T Consensus 40 ~~~~~~~~G~~VAakvk~~~~~~~WILa~Vv~~~~~~~rYeV~D~d~eg~~~~~~s~~~IIPLP~ 104 (180)
T 3mea_A 40 SGDYVARPGDKVAARVKAVDGDEQWILAEVVSYSHATNKYEVDDIDEEGKERHTLSRRRVIPLPQ 104 (180)
T ss_dssp CTTCCCCTTCEEEEEEECCC--EEEEEEEEEEEETTTTEEEEEECCTTCCEEEEEEGGGEEECCS
T ss_pred CCCcccCCCCEEEEEcCCCCCCccEEEEEEEEEcCCCCEEEEecCCCCCceeEEeCHHHEEECCC
Confidence 34468999999999974 3468999999998864 487765553332 4677788888874
No 100
>1nz9_A Transcription antitermination protein NUSG; transcription elongation, riken structural genomics/proteomics initiative, RSGI; NMR {Thermus thermophilus} SCOP: b.34.5.4
Probab=50.23 E-value=15 Score=24.46 Aligned_cols=49 Identities=20% Similarity=0.264 Sum_probs=33.0
Q ss_pred CCCCCCCeEEEEecCCCCEEEEEEeeEeCC--eeEEEEecCCceEE--EcCCCc
Q 025684 52 EKLAVGTKVQAVYSEDGEWYDATIEAITPN--GYYVTYDSWGNKEE--VDPANV 101 (249)
Q Consensus 52 ~~~kvGd~ClA~ys~Dg~wY~A~I~~i~~~--~~~V~F~~Ygn~E~--V~~~~l 101 (249)
..+.+||.+...- +.=.=+.++|.+++.+ .+.|...-+|..-. +++++|
T Consensus 3 ~~~~~Gd~V~V~~-Gpf~g~~g~v~~v~~~k~~v~V~v~~~Gr~t~v~l~~~~v 55 (58)
T 1nz9_A 3 VAFREGDQVRVVS-GPFADFTGTVTEINPERGKVKVMVTIFGRETPVELDFSQV 55 (58)
T ss_dssp CSCCTTCEEEECS-GGGTTCEEEEEEEETTTTEEEEEEESSSSEEEEEECGGGE
T ss_pred cccCCCCEEEEee-cCCCCcEEEEEEEcCCCCEEEEEEEeCCCEEEEEECHHHE
Confidence 4688999999883 2323479999999865 36777777776543 444444
No 101
>2eqs_A ATP-dependent RNA helicase DHX8; S1 domain, OB-fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=48.06 E-value=24 Score=26.08 Aligned_cols=35 Identities=17% Similarity=0.321 Sum_probs=28.0
Q ss_pred CCCEEEEEEeeEeCCeeEEEEecC--CceEEEcCCCc
Q 025684 67 DGEWYDATIEAITPNGYYVTYDSW--GNKEEVDPANV 101 (249)
Q Consensus 67 Dg~wY~A~I~~i~~~~~~V~F~~Y--gn~E~V~~~~l 101 (249)
-|..|.++|..|...++-|.+.+| +-.-.|+.++|
T Consensus 12 vG~i~~G~V~~v~~fG~FV~l~~~~~~~~Glvhisel 48 (103)
T 2eqs_A 12 IGDIYNGKVTSIMQFGCFVQLEGLRKRWEGLVHISEL 48 (103)
T ss_dssp TTCEEEEEEEEECSSCEEEEECSSSSCCEEEECGGGT
T ss_pred CCCEEEEEEEEEeccEEEEEEcCCCCCeEEEEEHHHC
Confidence 356799999999998988998876 66677866665
No 102
>4db1_A Myosin-7; S1DC, cardiac, beta isoform, MYH7, myhcb, MYHC-beta, contractIle protein; HET: ANP; 2.60A {Homo sapiens} PDB: 2w4a_M 2w4g_M 2w4h_M 2mys_A* 1m8q_A* 1mvw_A* 1o18_A* 1o19_A* 1o1a_A* 1o1b_A* 1o1c_A* 1o1d_A* 1o1e_A* 1o1f_A* 1o1g_A*
Probab=47.10 E-value=37 Score=34.43 Aligned_cols=52 Identities=15% Similarity=0.151 Sum_probs=43.2
Q ss_pred CCCCCCCeEEEEecCCCCEEEEEEeeEeCCeeEEEEecCCceEEEcCCCcccCC
Q 025684 52 EKLAVGTKVQAVYSEDGEWYDATIEAITPNGYYVTYDSWGNKEEVDPANVRPVN 105 (249)
Q Consensus 52 ~~~kvGd~ClA~ys~Dg~wY~A~I~~i~~~~~~V~F~~Ygn~E~V~~~~lrpl~ 105 (249)
..|..|..|-..- ++..|-.|+|.+..++.+.|. ...|..-+|+.++|.|++
T Consensus 29 ~~~~~~~~vWv~d-~~~~~~~~~v~~~~~~~~~v~-~~~g~~~~v~~~~v~~~n 80 (783)
T 4db1_A 29 RPFDLKKDVFVPD-DKQEFVKAKIVSREGGKVTAE-TEYGKTVTVKEDQVMQQN 80 (783)
T ss_dssp SCCCTTTEEEEEC-SSSSEEEEEEEEECSSEEEEE-ETTTEEEEEEGGGCEECC
T ss_pred cCCcCCCEEEEEC-CCCCEEEEEEEEecCCEEEEE-ECCCCEEeCCHHHcccCC
Confidence 4799999998774 456799999999888888888 677888899988888874
No 103
>1luz_A Protein K3, protein K2; stranded anti-parallel beta barrel, viral protein; 1.80A {Vaccinia virus} SCOP: b.40.4.5
Probab=46.96 E-value=29 Score=25.08 Aligned_cols=32 Identities=6% Similarity=0.085 Sum_probs=26.5
Q ss_pred CCCEEEEEEeeEeCCeeEEEEecC-CceEEEcCC
Q 025684 67 DGEWYDATIEAITPNGYYVTYDSW-GNKEEVDPA 99 (249)
Q Consensus 67 Dg~wY~A~I~~i~~~~~~V~F~~Y-gn~E~V~~~ 99 (249)
-|..|.++|. |++.|+-|.+.+| |-.-.|+.+
T Consensus 11 vG~~~~G~V~-v~~fG~FVel~~~~~~eGLvhis 43 (88)
T 1luz_A 11 AGDVIKGRVY-EKDYALYIYLFDYPHFEAILAES 43 (88)
T ss_dssp TTCEEEEEEE-EETTEEEEEETTCTTSEEEEGGG
T ss_pred CCCEEEEEEE-EEccEEEEEECCCCCeEEEEEee
Confidence 4788999999 9999999999888 566777444
No 104
>1kk8_A Myosin heavy chain, striated muscle; actin-detached, mechanics of motor, contractIle PROT; HET: ADP; 2.30A {Argopecten irradians} SCOP: b.34.3.1 c.37.1.9 PDB: 1kk7_A* 1qvi_A* 1s5g_A* 1sr6_A 1b7t_A* 1kqm_A* 1kwo_A* 1l2o_A* 1dfl_A* 2w4t_C 2w4v_C 2w4w_C 1dfk_A 2ec6_A 2otg_A* 2os8_A* 2ovk_A 2ekv_A 2ekw_A 2oy6_A* ...
Probab=45.36 E-value=43 Score=34.24 Aligned_cols=53 Identities=9% Similarity=0.061 Sum_probs=44.4
Q ss_pred CCCCCCCeEEEEecCCCCEEEEEEeeEeCCeeEEEEecCCceEEEcCCCcccCC
Q 025684 52 EKLAVGTKVQAVYSEDGEWYDATIEAITPNGYYVTYDSWGNKEEVDPANVRPVN 105 (249)
Q Consensus 52 ~~~kvGd~ClA~ys~Dg~wY~A~I~~i~~~~~~V~F~~Ygn~E~V~~~~lrpl~ 105 (249)
..|..|+.|-..-. +..|-.|+|.+..++.+.|...+-|...+|+.++|.|++
T Consensus 26 ~~~~~~~~vWv~~~-~~~~~~~~v~~~~~~~~~v~~~~~g~~~~v~~~~~~~~n 78 (837)
T 1kk8_A 26 AAFDGKKNCWVPDE-KEGFASAEIQSSKGDEITVKIVADSSTRTVKKDDIQSMN 78 (837)
T ss_dssp CCCCTTTEEEEEET-TTEEEEEEEEEEETTEEEEEETTTCCEEEEEGGGCEECC
T ss_pred cccccCCEEEEECC-CCCeeEEEEEeecCCeEEEEEcCCCceEEeeHHHccccC
Confidence 47999999977743 567999999999888899999888888888888887774
No 105
>4dt4_A FKBP-type 16 kDa peptidyl-prolyl CIS-trans isomer; FKBP domain, IF domain, chaperone, peptidyl-prolyl isomerase isomerase; 1.35A {Escherichia coli}
Probab=43.81 E-value=43 Score=27.38 Aligned_cols=33 Identities=18% Similarity=0.210 Sum_probs=27.6
Q ss_pred CCCCCCCeEEEEecCCCCEEEEEEeeEeCCeeEE
Q 025684 52 EKLAVGTKVQAVYSEDGEWYDATIEAITPNGYYV 85 (249)
Q Consensus 52 ~~~kvGd~ClA~ys~Dg~wY~A~I~~i~~~~~~V 85 (249)
..+.+|+.+.+. .+||+-++++|.+|+++.++|
T Consensus 111 ~~~~~G~~~~~~-~~~G~~~~~~V~~v~~~~V~v 143 (169)
T 4dt4_A 111 GEPEIGAIMLFT-AMDGSEMPGVIREINGDSITV 143 (169)
T ss_dssp CCCCTTCEEEEE-CTTSCEEEEEEEEEETTEEEE
T ss_pred CCCCCCcEEEEE-CCCCCEEEEEEEEEcCCEEEE
Confidence 468999999886 568999999999999886555
No 106
>1v6z_A Hypothetical protein TTHA0657; structural genomics, riken structural genomics/proteomics initiative, RSGI, transferase; 2.00A {Thermus thermophilus HB8} SCOP: b.122.1.2 c.116.1.5 PDB: 2cx8_A* 2z0y_A*
Probab=40.81 E-value=37 Score=28.91 Aligned_cols=35 Identities=11% Similarity=0.049 Sum_probs=28.0
Q ss_pred CCCCCCCeEEEEecCCCCEEEEEEeeEeCCeeEEEEec
Q 025684 52 EKLAVGTKVQAVYSEDGEWYDATIEAITPNGYYVTYDS 89 (249)
Q Consensus 52 ~~~kvGd~ClA~ys~Dg~wY~A~I~~i~~~~~~V~F~~ 89 (249)
...++||.+... .++| .|.|+|..++. .+.+....
T Consensus 27 lRl~~Gd~v~l~-dg~g-~~~a~i~~~~~-~~~~~i~~ 61 (228)
T 1v6z_A 27 LRARVGDRFTVF-DGER-EALAEVVDLGP-PLRYRVLE 61 (228)
T ss_dssp SCCCTTCEEEEE-CSSC-EEEEEEEECCS-SCEEEEEE
T ss_pred ccCCCCCEEEEE-eCCc-EEEEEEEECCC-eEEEEEEE
Confidence 568999998775 6799 99999999988 76555544
No 107
>3h6z_A Polycomb protein SFMBT; MBT, MBR repeat, aromatic CAGE, chromatin regulator, DNA-BIN metal-binding, nucleus, repressor, transcription; HET: MLZ SUC; 2.80A {Drosophila melanogaster}
Probab=40.35 E-value=32 Score=32.64 Aligned_cols=42 Identities=26% Similarity=0.329 Sum_probs=34.3
Q ss_pred CCCCCCCCeEEEEe-cCCCCEEEEEEeeEeCCee-EEEEecCCc
Q 025684 51 QEKLAVGTKVQAVY-SEDGEWYDATIEAITPNGY-YVTYDSWGN 92 (249)
Q Consensus 51 ~~~~kvGd~ClA~y-s~Dg~wY~A~I~~i~~~~~-~V~F~~Ygn 92 (249)
.+.|++|++..|+= ..-.....|+|.+|-+++| .|.|+||..
T Consensus 265 ~~~F~~GMKLEavDp~~~~~icvATV~~V~~~~~~~v~~Dg~~~ 308 (447)
T 3h6z_A 265 TNSFVEGMKLEAVDPLNLSSICPATVMAVLKFGYMMIRIDSYQP 308 (447)
T ss_dssp CCCCCTTCEEEEEETTEEEEEEEEEEEEECSTTEEEEEETTSCT
T ss_pred ccccccccEEEeeccCCCCcEEEEEEEEeccCCEEEEEECCCCc
Confidence 46899999999997 2234689999999987764 999999964
No 108
>2k52_A Uncharacterized protein MJ1198; metal-binding, zinc, zinc-finger, structural genomics, PSI-2, protein structure initiative; NMR {Methanocaldococcus jannaschii}
Probab=38.11 E-value=49 Score=23.03 Aligned_cols=34 Identities=15% Similarity=0.467 Sum_probs=25.4
Q ss_pred CCCEEEEEEeeEeCCeeEEEEecCCceEEEcCCCc
Q 025684 67 DGEWYDATIEAITPNGYYVTYDSWGNKEEVDPANV 101 (249)
Q Consensus 67 Dg~wY~A~I~~i~~~~~~V~F~~Ygn~E~V~~~~l 101 (249)
-|..|.++|.+|.+.++-|...+ +-.-.|+.++|
T Consensus 5 ~G~iv~G~V~~v~~~G~fV~l~~-~~~Gllh~sel 38 (80)
T 2k52_A 5 PGKFYKGVVTRIEKYGAFINLNE-QVRGLLRPRDM 38 (80)
T ss_dssp TTCEEEEEEEEEETTEEEEEEET-TEEEEECGGGC
T ss_pred CCCEEEEEEEEEeCCEEEEEECC-CCEEEEEHHHC
Confidence 46789999999999988777754 55566755554
No 109
>1g2b_A Spectrin alpha chain; capping protein, calcium-binding, duplication, repeat, SH3 domain, cytoskeleton, metal binding protein; 1.12A {Gallus gallus} SCOP: b.34.2.1 PDB: 1tud_A
Probab=37.71 E-value=63 Score=21.06 Aligned_cols=27 Identities=11% Similarity=0.415 Sum_probs=22.2
Q ss_pred CCCCCCCCCCeEEEEecCCCCEEEEEE
Q 025684 49 DNQEKLAVGTKVQAVYSEDGEWYDATI 75 (249)
Q Consensus 49 ~~~~~~kvGd~ClA~ys~Dg~wY~A~I 75 (249)
.....++.||....+-..|+.|+.+++
T Consensus 35 ~~eLsf~~Gd~i~v~~~~~~~Ww~g~~ 61 (62)
T 1g2b_A 35 PREVTMKKGDILTLLNSTNKDWWKVEV 61 (62)
T ss_dssp TTBCCBCTTCEEEEEECCSSSEEEEEE
T ss_pred CCccCCCCCCEEEEEEecCCCEEEEEe
Confidence 345789999999988877888999876
No 110
>2k8i_A SLYD, peptidyl-prolyl CIS-trans isomerase; ppiase, chaperone, rotamase; NMR {Escherichia coli}
Probab=37.67 E-value=35 Score=27.88 Aligned_cols=33 Identities=24% Similarity=0.393 Sum_probs=26.5
Q ss_pred CCCCCCCeEEEEecCCCCEEEEEEeeEeCCeeEEE
Q 025684 52 EKLAVGTKVQAVYSEDGEWYDATIEAITPNGYYVT 86 (249)
Q Consensus 52 ~~~kvGd~ClA~ys~Dg~wY~A~I~~i~~~~~~V~ 86 (249)
..+.+|+.+.+. ..+|. ++++|.+|+++.++|=
T Consensus 88 ~~~~~G~~~~~~-~~~G~-~~~~V~~v~~~~V~vD 120 (171)
T 2k8i_A 88 DELQVGMRFLAE-TDQGP-VPVEITAVEDDHVVVD 120 (171)
T ss_dssp SCCCTTCEEEEE-ETTEE-EEEEEEEECSSEEEEE
T ss_pred cCccCCcEEEEE-CCCCc-EEEEEEEEcCCEEEEe
Confidence 368999999977 56887 8999999998755543
No 111
>2cqo_A Nucleolar protein of 40 kDa; S1 domain, OB-fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=37.19 E-value=19 Score=27.53 Aligned_cols=35 Identities=9% Similarity=0.165 Sum_probs=26.5
Q ss_pred CCCEEEEEEeeEeCCeeEEEEecCCceEEEcCCCc
Q 025684 67 DGEWYDATIEAITPNGYYVTYDSWGNKEEVDPANV 101 (249)
Q Consensus 67 Dg~wY~A~I~~i~~~~~~V~F~~Ygn~E~V~~~~l 101 (249)
-|..|.++|..|...++-|.+.+++..-.|+.++|
T Consensus 22 vG~iv~G~V~~I~~fGaFV~l~g~~~~Glvhisel 56 (119)
T 2cqo_A 22 LYTIFQGEVAMVTDYGAFIKIPGCRKQGLVHRTHM 56 (119)
T ss_dssp TTCEEEEEEEEEETTEEEEECTTCSSCEEEEHHHH
T ss_pred CCCEEEEEEEEEeCceEEEEECCCcEEEEEEHHHC
Confidence 46789999999999998888866655666655444
No 112
>1jo8_A ABP1P, actin binding protein; SH3 domain actin-binding-protein, structural protein; 1.30A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 2k3b_A 2rpn_A
Probab=34.08 E-value=80 Score=20.12 Aligned_cols=27 Identities=19% Similarity=0.394 Sum_probs=22.4
Q ss_pred CCCCCCCCCeEEEEecCCCCEEEEEEe
Q 025684 50 NQEKLAVGTKVQAVYSEDGEWYDATIE 76 (249)
Q Consensus 50 ~~~~~kvGd~ClA~ys~Dg~wY~A~I~ 76 (249)
....++.||.....-..|+.|+.++..
T Consensus 15 ~eLs~~~Gd~i~v~~~~~~~Ww~g~~~ 41 (58)
T 1jo8_A 15 NELTFVENDKIINIEFVDDDWWLGELE 41 (58)
T ss_dssp TBCCBCTTCEEEEEECCSSSEEEEEET
T ss_pred CCcccCCCCEEEEEEecCCCcEEEEEC
Confidence 356799999999888778889998875
No 113
>2bz8_A SH3-domain kinase binding protein 1; SH3 domain, CIN85 adaptor protein, CBL ubiquitin ligase; 2.0A {Homo sapiens}
Probab=34.02 E-value=81 Score=20.09 Aligned_cols=26 Identities=27% Similarity=0.727 Sum_probs=21.7
Q ss_pred CCCCCCCCCeEEEEecCCCCEEEEEE
Q 025684 50 NQEKLAVGTKVQAVYSEDGEWYDATI 75 (249)
Q Consensus 50 ~~~~~kvGd~ClA~ys~Dg~wY~A~I 75 (249)
....++.||.....-..|+.|+.++.
T Consensus 16 ~eLs~~~Gd~i~v~~~~~~~Ww~g~~ 41 (58)
T 2bz8_A 16 DELTISVGEIITNIRKEDGGWWEGQI 41 (58)
T ss_dssp TBCCBCTTCEEEEEECCTTTEEEEEE
T ss_pred CEeeECCCCEEEEEEeCCCCEEEEEE
Confidence 34689999999998877788998885
No 114
>2jz2_A SSL0352 protein; SH3-like, synechocystis SP. PCC 6803, targe PSI, protein structure initiative, northeast structural GEN consortium, NESG; NMR {Synechocystis SP} PDB: 3c4s_A
Probab=33.97 E-value=43 Score=23.59 Aligned_cols=49 Identities=14% Similarity=0.318 Sum_probs=34.8
Q ss_pred CCCCeEEEEecCCCCE--EEEEEeeEeCCeeEEEEecCCce---EEEcCCCcccCC
Q 025684 55 AVGTKVQAVYSEDGEW--YDATIEAITPNGYYVTYDSWGNK---EEVDPANVRPVN 105 (249)
Q Consensus 55 kvGd~ClA~ys~Dg~w--Y~A~I~~i~~~~~~V~F~~Ygn~---E~V~~~~lrpl~ 105 (249)
-+|..+...-. +..| |...|..|+++.+.|.|.| ||= -+.++++|....
T Consensus 3 lPG~~V~V~np-~~~Yy~y~G~VQRvsdgkaaVLFEG-GnWDKLVTf~L~eLe~~~ 56 (66)
T 2jz2_A 3 FPGATVRVTNV-DDTYYRFEGLVQRVSDGKAAVLFEN-GNWDKLVTFRLSELEAVK 56 (66)
T ss_dssp CTTCEEEECCT-TSTTBTCEEEEEEEETTEEEEEEES-SSCEEEEEEESTTEEECC
T ss_pred cCCCEEEEeCC-CCcccceeEEEEEecCCcEEEEecC-CCceeEEEEEhhHceecc
Confidence 45677766643 4444 6899999999999999999 763 445666666553
No 115
>3eg3_A Proto-oncogene tyrosine-protein kinase ABL1; beta, ATP-binding, cell adhesion, cytoskeleton, LIPO magnesium, manganese, metal-binding, myristate; 1.40A {Homo sapiens} PDB: 3egu_A 3eg0_A 3eg2_A 3eg1_A 1abo_A 1abq_A 1ju5_C* 2o88_A 1bbz_A 1awo_A
Probab=33.59 E-value=83 Score=20.19 Aligned_cols=27 Identities=30% Similarity=0.622 Sum_probs=21.9
Q ss_pred CCCCCCCCCCeEEEEe-cCCCCEEEEEE
Q 025684 49 DNQEKLAVGTKVQAVY-SEDGEWYDATI 75 (249)
Q Consensus 49 ~~~~~~kvGd~ClA~y-s~Dg~wY~A~I 75 (249)
.....++.||....+- ..|+.|+.++.
T Consensus 19 ~~eLs~~~Gd~i~v~~~~~~~~W~~~~~ 46 (63)
T 3eg3_A 19 DNTLSITKGEKLRVLGYNHNGEWCEAQT 46 (63)
T ss_dssp SSBCCBCTTCEEEEEEECTTSSEEEEEE
T ss_pred CCccCCCCCCEEEEEEeCCCCCeEEEEE
Confidence 3457899999999987 56788999887
No 116
>3zua_A CLD, alpha-hemolysin translocation ATP-binding protein; C39 peptidase-like domain, ABC transporter, haemolysin, HYDR heteronuclear; NMR {Escherichia coli}
Probab=32.35 E-value=25 Score=26.88 Aligned_cols=40 Identities=13% Similarity=0.209 Sum_probs=28.1
Q ss_pred CCCeEEEEecCCCCEEEEEEeeEeC--CeeEEEEecCCceEEEcC
Q 025684 56 VGTKVQAVYSEDGEWYDATIEAITP--NGYYVTYDSWGNKEEVDP 98 (249)
Q Consensus 56 vGd~ClA~ys~Dg~wY~A~I~~i~~--~~~~V~F~~Ygn~E~V~~ 98 (249)
..-+|++.|. ||.|| +|.+++. +.+.|..-+.|....++.
T Consensus 75 l~lP~Il~~~-~g~~~--Vv~~~~~~~~~~~I~dP~~g~~~~~s~ 116 (142)
T 3zua_A 75 ISLPALVWRE-DGRHF--ILTKVSKEANRYLIFDLEQRNPRVLEQ 116 (142)
T ss_dssp SSSSEEECCT-TSCCE--EEEEEETTTTEEEEEETTTTEEEEEEH
T ss_pred CCCCEEEEEc-CCCEE--EEEEEeCCCCEEEEEcCCCCCcEEecH
Confidence 4679999874 77765 6778886 457777777776566633
No 117
>2oaw_A Spectrin alpha chain, brain; SH3 domain, chimera, structural protein; 1.90A {Gallus gallus} PDB: 2rot_A 2rmo_A 2kr3_A
Probab=31.58 E-value=98 Score=19.95 Aligned_cols=28 Identities=11% Similarity=0.413 Sum_probs=23.1
Q ss_pred CCCCCCCCCeEEEEecCCCCEEEEEEee
Q 025684 50 NQEKLAVGTKVQAVYSEDGEWYDATIEA 77 (249)
Q Consensus 50 ~~~~~kvGd~ClA~ys~Dg~wY~A~I~~ 77 (249)
....++.||....+-..|+.|+.++...
T Consensus 16 ~eLs~~~Gd~i~v~~~~~~~Ww~g~~~~ 43 (65)
T 2oaw_A 16 REVTMKKGDILTLLNSTNKDWWKVEVKI 43 (65)
T ss_dssp TBCCBCTTCEEEEEECCSSSEEEEEEEE
T ss_pred CCCCCCCCCEEEEEEcCCCCEEEEEEcc
Confidence 3467999999999887788899998763
No 118
>2jvv_A Transcription antitermination protein NUSG; transcription factor, transcription regulation, transcription termination; NMR {Escherichia coli} PDB: 2k06_A 2kvq_G
Probab=31.21 E-value=66 Score=25.97 Aligned_cols=50 Identities=20% Similarity=0.314 Sum_probs=34.7
Q ss_pred CCCCCCCCCeEEEEecCCCC--EEEEEEeeEeCC--eeEEEEecCCc--eEEEcCCCcc
Q 025684 50 NQEKLAVGTKVQAVYSEDGE--WYDATIEAITPN--GYYVTYDSWGN--KEEVDPANVR 102 (249)
Q Consensus 50 ~~~~~kvGd~ClA~ys~Dg~--wY~A~I~~i~~~--~~~V~F~~Ygn--~E~V~~~~lr 102 (249)
+...+.+||.+... ||- =+.|+|.+|+.+ .+.|...-+|- .-++++++|.
T Consensus 124 ~~~~~~~Gd~V~V~---~GPf~g~~G~v~~v~~~k~r~~V~v~ifgr~t~vel~~~qve 179 (181)
T 2jvv_A 124 PKTLFEPGEMVRVN---DGPFADFNGVVEEVDYEKSRLKVSVSIFGRATPVELDFSQVE 179 (181)
T ss_dssp CCCCCCTTEEEEEC---SSTTTTEEEEEEEEETTTTEEEEEEEETTEEEEEEECTTTEE
T ss_pred ccccCCCCCEEEEe---ccCCCCcEEEEEEEeCCCCEEEEEEEECCCCEEEEECHHHEE
Confidence 34578999999998 443 389999999864 36555555664 4556655554
No 119
>1y71_A Kinase-associated protein B; structural genomics, midwest CE structural genomics, MCSG, protein structure initiative, PS unknown function; 1.95A {Bacillus cereus} SCOP: b.34.16.1
Probab=31.20 E-value=1e+02 Score=24.56 Aligned_cols=33 Identities=24% Similarity=0.508 Sum_probs=25.9
Q ss_pred CCCCCCeEEEEecCCCCEEEEEEeeEeCCeeEEEE
Q 025684 53 KLAVGTKVQAVYSEDGEWYDATIEAITPNGYYVTY 87 (249)
Q Consensus 53 ~~kvGd~ClA~ys~Dg~wY~A~I~~i~~~~~~V~F 87 (249)
.|.+|+.+.+.|- -| -|-+.|+++.++.|.|.-
T Consensus 7 ~~~~g~~v~~~yK-TG-~YigeI~e~~~~~~lVkV 39 (130)
T 1y71_A 7 TFEIGEIVTGIYK-TG-KYIGEVTNSRPGSYVVKV 39 (130)
T ss_dssp CCCTTCEEEEEET-TE-EEEEEEEEEETTEEEEEE
T ss_pred cCCccceeEEEEe-cc-eeEEEEEeecCCeEEEEE
Confidence 5999999999994 44 578999988888665543
No 120
>2dl4_A Protein STAC; SH3 domain, STAC protein, SRC homology 3, cysteine-rich domain protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=31.17 E-value=1.1e+02 Score=20.12 Aligned_cols=43 Identities=9% Similarity=0.271 Sum_probs=30.6
Q ss_pred CCCCCCCCCCeEEEEecCCCCEEEEEEeeEeCCeeEEEEecCCceEEEcCCCcccCC
Q 025684 49 DNQEKLAVGTKVQAVYSEDGEWYDATIEAITPNGYYVTYDSWGNKEEVDPANVRPVN 105 (249)
Q Consensus 49 ~~~~~~kvGd~ClA~ys~Dg~wY~A~I~~i~~~~~~V~F~~Ygn~E~V~~~~lrpl~ 105 (249)
.....++.||....+-..|+.|+.+++. |..-.+|.+.|++++
T Consensus 21 ~~eLs~~~Gd~i~v~~~~~~~Ww~g~~~--------------g~~G~~P~~yv~~~~ 63 (68)
T 2dl4_A 21 NEDLEMRPGDIITLLEDSNEDWWKGKIQ--------------DRIGFFPANFVQRLS 63 (68)
T ss_dssp TTBCCCCTTCEEEEEECCCSSEEEEECS--------------SCEEEEETTTEEECC
T ss_pred cCCcCCCCCCEEEEEEeCCCCEEEEEEC--------------CcEEEEehHHeEECC
Confidence 3457899999999998778889988732 234456666666664
No 121
>3f70_A Lethal(3)malignant brain tumor-like 2 protein; MBT, chromatin regulator, metal-binding, nucleus, transcript transcription regulation, zinc-finger; HET: MLZ; 2.10A {Homo sapiens} PDB: 3dbb_A* 3cey_A
Probab=31.00 E-value=85 Score=29.74 Aligned_cols=53 Identities=19% Similarity=0.340 Sum_probs=41.0
Q ss_pred CCCCCCCeEEEEecCC----CCEEEEEEeeEeCCeeEEEEecCCce----EE--EcCCCcccC
Q 025684 52 EKLAVGTKVQAVYSED----GEWYDATIEAITPNGYYVTYDSWGNK----EE--VDPANVRPV 104 (249)
Q Consensus 52 ~~~kvGd~ClA~ys~D----g~wY~A~I~~i~~~~~~V~F~~Ygn~----E~--V~~~~lrpl 104 (249)
..+++|.+..+.=..+ ..|.-|+|..+.|......|+||++. -. +...+|+|+
T Consensus 39 ~~~~~GmklEv~d~~~~~~~~~~WvAtV~~~~G~rL~Lry~G~~~d~~~DFW~~~~s~~ihPv 101 (456)
T 3f70_A 39 EDVMKGMKVEVLNSDAVLPSRVYWIASVIQTAGYRVLLRYEGFENDASHDFWCNLGTVDVHPI 101 (456)
T ss_dssp GGCCTTCEEEEECCSCCC--CCEEEEEEEEEETTEEEEEETTCTTCCTTCEEEETTSTTEECT
T ss_pred ccccCCCEEEEecCCCCCCccceEEEEEeeecceeEEEEecccCCCCcCCcceeCCCCceeec
Confidence 5799999999996543 35789999999998899999999852 22 334567776
No 122
>1tg0_A BBC1 protein, myosin tail region-interacting protein MTI1; yeast, SH3 domain, structural genomics, contractIle protein; 0.97A {Saccharomyces cerevisiae} PDB: 1zuk_A 1wdx_A
Probab=30.96 E-value=88 Score=20.67 Aligned_cols=29 Identities=17% Similarity=0.401 Sum_probs=22.8
Q ss_pred CCCCCCCCCCeEEEEecCCCCEEEEEEee
Q 025684 49 DNQEKLAVGTKVQAVYSEDGEWYDATIEA 77 (249)
Q Consensus 49 ~~~~~~kvGd~ClA~ys~Dg~wY~A~I~~ 77 (249)
.....|+.||.....-..|..||.+++..
T Consensus 21 ~~eLsf~~Gd~i~v~~~~~~~Ww~g~~~~ 49 (68)
T 1tg0_A 21 EDDLNFEKDQEIIVTSVEDAEWYFGEYQD 49 (68)
T ss_dssp TTBCCBCTTCEEEEEEECSSSEEEEEEEC
T ss_pred cCCCCCCCCCEEEEEEecCCCeEEEEECC
Confidence 34578999999988876677899998763
No 123
>2lj0_A Sorbin and SH3 domain-containing protein 1; R85FL, ponsin, CAP, signaling protein; NMR {Homo sapiens} PDB: 2lj1_A
Probab=30.39 E-value=90 Score=21.10 Aligned_cols=28 Identities=25% Similarity=0.411 Sum_probs=22.0
Q ss_pred CCCCCCCCCCeEEEEecCCCCEEEEEEe
Q 025684 49 DNQEKLAVGTKVQAVYSEDGEWYDATIE 76 (249)
Q Consensus 49 ~~~~~~kvGd~ClA~ys~Dg~wY~A~I~ 76 (249)
.....++.||.+...-..|..|+.+++.
T Consensus 20 ~~ELs~~~Gd~i~v~~~~~~gWw~g~~~ 47 (65)
T 2lj0_A 20 DDELELRDGDIVDVMEKCDDGWFVGTSR 47 (65)
T ss_dssp TTBCCBCTTCEEEEEEECTTSEEEEEET
T ss_pred cCCcCCCCCCEEEEeEeCCCCEEEEEEC
Confidence 3457899999999887667779988763
No 124
>2vwf_A Growth factor receptor-bound protein 2; polymorphism, phosphoprotein, golgi apparatus, alternative splicing, HOST-virus interaction, SH3C, signaling; 1.58A {Homo sapiens} PDB: 2w0z_A 1gcq_A 1gfc_A 1gfd_A 1io6_A 2vvk_A
Probab=30.35 E-value=1e+02 Score=19.49 Aligned_cols=26 Identities=12% Similarity=0.360 Sum_probs=21.8
Q ss_pred CCCCCCCCCeEEEEecCCCCEEEEEE
Q 025684 50 NQEKLAVGTKVQAVYSEDGEWYDATI 75 (249)
Q Consensus 50 ~~~~~kvGd~ClA~ys~Dg~wY~A~I 75 (249)
....++.||.....-..|+.|+.++.
T Consensus 17 ~eLs~~~Gd~i~v~~~~~~~Ww~g~~ 42 (58)
T 2vwf_A 17 GELGFRRGDFIHVMDNSDPNWWKGAC 42 (58)
T ss_dssp TBCCBCTTCEEEEEECCSSSEEEEEE
T ss_pred CCcCCCCCCEEEEEEcCCCCEEEEEE
Confidence 35789999999998876778999887
No 125
>1y0m_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 1; SH3 domain, hydrolase; 1.20A {Rattus norvegicus} PDB: 1ywp_A 1ywo_A
Probab=30.33 E-value=98 Score=19.88 Aligned_cols=26 Identities=19% Similarity=0.479 Sum_probs=21.5
Q ss_pred CCCCCCCCCeEEEEecCCCCEEEEEE
Q 025684 50 NQEKLAVGTKVQAVYSEDGEWYDATI 75 (249)
Q Consensus 50 ~~~~~kvGd~ClA~ys~Dg~wY~A~I 75 (249)
....++.||.....-..|+.|+.++.
T Consensus 18 ~eLs~~~Gd~i~v~~~~~~~W~~g~~ 43 (61)
T 1y0m_A 18 DELTFTKSAIIQNVEKQDGGWWRGDY 43 (61)
T ss_dssp TBCCBCTTCEEEEEECCSSSEEEEEE
T ss_pred CCcCCcCCCEEEEEEecCCCEEEEEE
Confidence 35789999999988876778999876
No 126
>1uti_A GRB2-related adaptor protein 2; signaling protein regulator, SH3 domain/complex, adaptor protein (MONA); 1.5A {Mus musculus} SCOP: b.34.2.1 PDB: 1h3h_A 1oeb_A 2w10_A 2d0n_A
Probab=29.95 E-value=1e+02 Score=19.50 Aligned_cols=26 Identities=15% Similarity=0.437 Sum_probs=21.6
Q ss_pred CCCCCCCCCeEEEEecCCCCEEEEEE
Q 025684 50 NQEKLAVGTKVQAVYSEDGEWYDATI 75 (249)
Q Consensus 50 ~~~~~kvGd~ClA~ys~Dg~wY~A~I 75 (249)
....++.||.....-..|+.|+.++.
T Consensus 16 ~eLs~~~Gd~i~v~~~~~~~Ww~g~~ 41 (58)
T 1uti_A 16 DELGFRSGEVVEVLDSSNPSWWTGRL 41 (58)
T ss_dssp TBCCBCTTCEEEEEECCSSSEEEEEE
T ss_pred CCCCCCCCCEEEEEEECCCCEEEEEE
Confidence 45789999999998876788998886
No 127
>3p8b_B Transcription antitermination protein NUSG; transcription elongation factor, RNA polymerase, transferase transcription complex; 1.80A {Pyrococcus furiosus} PDB: 3qqc_D
Probab=29.33 E-value=80 Score=24.76 Aligned_cols=55 Identities=15% Similarity=0.040 Sum_probs=41.7
Q ss_pred CCCCCCCCCeEEEEecCCCCEEEEEEeeEeCCe--eEEEEecCCc--eEEEcCCCcccCC
Q 025684 50 NQEKLAVGTKVQAVYSEDGEWYDATIEAITPNG--YYVTYDSWGN--KEEVDPANVRPVN 105 (249)
Q Consensus 50 ~~~~~kvGd~ClA~ys~Dg~wY~A~I~~i~~~~--~~V~F~~Ygn--~E~V~~~~lrpl~ 105 (249)
....+.+||.+...- +-=.=+.|+|.+|+.+. +.|....+|. .-+|++++|+++.
T Consensus 88 ~~~~~~~Gd~VrI~~-Gpf~g~~g~V~~vd~~k~~v~V~v~~~gr~tpvel~~~~v~~i~ 146 (152)
T 3p8b_B 88 AVSGLEPGDLVEVIA-GPFKGQKAKVVKIDESKDEVVVQFIDAIVPIPVTIKGDYVRLIS 146 (152)
T ss_dssp TTTTCCTTCEEEECS-STTTTCEEEEEEEETTTTEEEEEESSCSSCCEEEEEGGGEEEEE
T ss_pred ccccCCCCCEEEEee-ecCCCCEEEEEEEeCCCCEEEEEEEecceeEEEEECHHHEEEec
Confidence 346799999999873 22233689999999763 6777777775 6788888998885
No 128
>3h0h_A Proto-oncogene tyrosine-protein kinase FYN; beta barrel, transferase; HET: PG4; 1.76A {Homo sapiens} SCOP: b.34.2.1 PDB: 3h0i_A 3h0f_A*
Probab=29.09 E-value=1e+02 Score=20.49 Aligned_cols=28 Identities=25% Similarity=0.569 Sum_probs=22.7
Q ss_pred CCCCCCCCCCeEEEEecCCCCEEEEEEe
Q 025684 49 DNQEKLAVGTKVQAVYSEDGEWYDATIE 76 (249)
Q Consensus 49 ~~~~~~kvGd~ClA~ys~Dg~wY~A~I~ 76 (249)
.....|+.||....+-..|+.||.++..
T Consensus 29 ~~eLs~~~Gd~i~v~~~~~~~Ww~g~~~ 56 (73)
T 3h0h_A 29 EDDLSFHKGEKFQILNSSEGDWWEARSL 56 (73)
T ss_dssp TTBCCBCTTCEEEEEECSSSSEEEEEET
T ss_pred CCcceEeCCCEEEEEEecCCCeEEEEEC
Confidence 3457899999999988767789988874
No 129
>1sem_A SEM-5; SRC-homology 3 (SH3) domain, peptide-binding protein; 2.00A {Caenorhabditis elegans} SCOP: b.34.2.1 PDB: 2sem_A 3sem_A 1k76_A 1kfz_A
Probab=29.08 E-value=1.1e+02 Score=19.28 Aligned_cols=26 Identities=12% Similarity=0.489 Sum_probs=21.7
Q ss_pred CCCCCCCCCeEEEEecCCCCEEEEEE
Q 025684 50 NQEKLAVGTKVQAVYSEDGEWYDATI 75 (249)
Q Consensus 50 ~~~~~kvGd~ClA~ys~Dg~wY~A~I 75 (249)
....++.||.....-..|..|+.++.
T Consensus 17 ~eLs~~~Gd~i~v~~~~~~~Ww~g~~ 42 (58)
T 1sem_A 17 GELAFKRGDVITLINKDDPNWWEGQL 42 (58)
T ss_dssp TBCCBCTTCEEEEEECSSSSEEEEEE
T ss_pred CCcCCCCCCEEEEEEecCCCEEEEEE
Confidence 35789999999998877778999887
No 130
>1w70_A Neutrophil cytosol factor 4; NADPH oxidase, P40PHOX, P47PHOX, SH3 domain, polyproline; 1.46A {Homo sapiens} PDB: 1w6x_A
Probab=28.87 E-value=1e+02 Score=19.80 Aligned_cols=26 Identities=12% Similarity=0.340 Sum_probs=21.4
Q ss_pred CCCCCCCCCeEEEEecCCCCEEEEEE
Q 025684 50 NQEKLAVGTKVQAVYSEDGEWYDATI 75 (249)
Q Consensus 50 ~~~~~kvGd~ClA~ys~Dg~wY~A~I 75 (249)
....++.||.....-..|+.|+.+++
T Consensus 19 ~eLs~~~Gd~i~v~~~~~~~W~~g~~ 44 (60)
T 1w70_A 19 LELNFKAGDVIFLLSRINKDWLEGTV 44 (60)
T ss_dssp TBCCBCTTCEEEEEEECSSSEEEEEE
T ss_pred CCccCCCCCEEEEEEeCCCCeEEEEE
Confidence 34789999999988866788999885
No 131
>1uj0_A Signal transducing adaptor molecule (SH3 domain and ITAM motif) 2; STAM, SH3, GRB2, GADS, PXXP, HRS, endocytosis, early endosome, signaling protein/signaling protein complex; 1.70A {Mus musculus} SCOP: b.34.2.1
Probab=28.85 E-value=1.1e+02 Score=19.81 Aligned_cols=27 Identities=15% Similarity=0.409 Sum_probs=22.2
Q ss_pred CCCCCCCCCeEEEEecCCCCEEEEEEe
Q 025684 50 NQEKLAVGTKVQAVYSEDGEWYDATIE 76 (249)
Q Consensus 50 ~~~~~kvGd~ClA~ys~Dg~wY~A~I~ 76 (249)
....++.||....+-..|+.|+.++..
T Consensus 20 ~eLs~~~Gd~i~v~~~~~~~Ww~g~~~ 46 (62)
T 1uj0_A 20 NELTFKHGELITVLDDSDANWWQGENH 46 (62)
T ss_dssp TBCCBCTTCEEEEEECCSSSEEEEEET
T ss_pred CCcCCCCCCEEEEEEeCCCCEEEEEEC
Confidence 457899999999988777889998764
No 132
>1ue9_A Intersectin 2; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, endocytosis/exocytosis complex; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=28.73 E-value=1e+02 Score=20.97 Aligned_cols=48 Identities=17% Similarity=0.255 Sum_probs=31.9
Q ss_pred CCCCCCCCCCeEEEEecCCCCEEEEEEeeEeCCeeEEEEecCCceEEEcCCCcccCC
Q 025684 49 DNQEKLAVGTKVQAVYSEDGEWYDATIEAITPNGYYVTYDSWGNKEEVDPANVRPVN 105 (249)
Q Consensus 49 ~~~~~~kvGd~ClA~ys~Dg~wY~A~I~~i~~~~~~V~F~~Ygn~E~V~~~~lrpl~ 105 (249)
.....|+.||.+..+-..|..||.+++..- + .-+..-.+|.+.|++++
T Consensus 21 ~~eLs~~~Gd~i~v~~~~~~gWw~g~~~~~-g--------~~~~~G~fP~~yv~~~~ 68 (80)
T 1ue9_A 21 SEQLSLAPGQLILILKKNTSGWWQGELQAR-G--------KKRQKGWFPASHVKLLG 68 (80)
T ss_dssp TTBCCCCTTCEEEEEEECSSSEEEEEECSC-C--------SSCCEEEEETTSEEECC
T ss_pred CCCCCCCCCCEEEEEEecCCCcEEEEECCC-C--------CCCcEEEEchHHeEECC
Confidence 445789999999988766778999887631 1 01234556666666664
No 133
>2ew3_A SH3-containing GRB2-like protein 3; SH3GL3, solution structure, signaling protein; NMR {Homo sapiens}
Probab=28.63 E-value=97 Score=20.75 Aligned_cols=26 Identities=19% Similarity=0.434 Sum_probs=21.5
Q ss_pred CCCCCCCCCeEEEEecCCCCEEEEEE
Q 025684 50 NQEKLAVGTKVQAVYSEDGEWYDATI 75 (249)
Q Consensus 50 ~~~~~kvGd~ClA~ys~Dg~wY~A~I 75 (249)
....++.||....+-..|+.|+.+++
T Consensus 18 ~eLsf~~Gd~i~v~~~~~~~Ww~g~~ 43 (68)
T 2ew3_A 18 GELGFKEGDIITLTNQIDENWYEGMI 43 (68)
T ss_dssp TBCCBCTTCEEEEEEESSSSEEEEEE
T ss_pred CccCCCCCCEEEEEEecCCCEEEEEE
Confidence 35789999999988876888999875
No 134
>2ycu_A Non muscle myosin 2C, alpha-actinin; motor protein; HET: AOV; 2.25A {Homo sapiens} PDB: 1br1_A* 1br4_A* 1br2_A*
Probab=28.61 E-value=75 Score=32.98 Aligned_cols=52 Identities=12% Similarity=0.045 Sum_probs=41.5
Q ss_pred CCCCCCeEEEEecCCCCEEEEEEeeEeCCeeEEEEecCCceEEEcCCCcccCC
Q 025684 53 KLAVGTKVQAVYSEDGEWYDATIEAITPNGYYVTYDSWGNKEEVDPANVRPVN 105 (249)
Q Consensus 53 ~~kvGd~ClA~ys~Dg~wY~A~I~~i~~~~~~V~F~~Ygn~E~V~~~~lrpl~ 105 (249)
.|..|+.|-..- ++..|-.|+|.+..++.+.|...+-|..-+|+.++|.|++
T Consensus 4 ~~~~~~~vwv~~-~~~~~~~~~v~~~~~~~~~v~~~~~~~~~~v~~~~~~~~n 55 (995)
T 2ycu_A 4 EWTARRLVWVPS-ELHGFEAAALRDEGEEEAEVELAESGRRLRLPRDQIQRMN 55 (995)
T ss_dssp CCGGGCEEEEEE-TTTEEEEEEEEEECSSEEEEEETTTCCEEEEEGGGCEECC
T ss_pred cccCCCeEEEEC-CCCceEEEEEEEecCCeEEEEECCCCeEEEeeHHHcccCC
Confidence 588888887664 3567999999998888899998876667788888887764
No 135
>2ker_A Parvulustat, alpha-amylase inhibitor Z-2685; parvulustat (Z-2685), hydrolase inhibitor; NMR {Streptomyces parvulus}
Probab=28.28 E-value=19 Score=26.20 Aligned_cols=37 Identities=22% Similarity=0.476 Sum_probs=27.5
Q ss_pred CCCCCCeEEEEecCCCCEEEEEEeeEeCCeeEEEEecCCce
Q 025684 53 KLAVGTKVQAVYSEDGEWYDATIEAITPNGYYVTYDSWGNK 93 (249)
Q Consensus 53 ~~kvGd~ClA~ys~Dg~wY~A~I~~i~~~~~~V~F~~Ygn~ 93 (249)
.....=.+-..|. ||+|-+|++..- +-.++|-|||+.
T Consensus 24 ~Cs~tvsVtV~Y~-dG~~~PCrv~~P---G~~~Tf~GyGT~ 60 (78)
T 2ker_A 24 GCADAVSVTVEYT-HGQWAPCRVIEP---GGWATFAGYGTD 60 (78)
T ss_dssp CSSSCEEEEEEES-SCCSCCCEEECT---TCCCEEECSCTT
T ss_pred CCcccEEEEEEEe-CCCcceeEEeCC---CCEEEecccccC
Confidence 3445556777886 999999988643 458899999974
No 136
>3ulr_B SRC substrate cortactin; SH3, protein-protein interaction, hydrolase, protein binding; 1.65A {Mus musculus} SCOP: b.34.2.0 PDB: 2d1x_A
Probab=28.15 E-value=90 Score=20.19 Aligned_cols=27 Identities=11% Similarity=0.303 Sum_probs=21.9
Q ss_pred CCCCCCCCCCeEEEEecCCCCEEEEEE
Q 025684 49 DNQEKLAVGTKVQAVYSEDGEWYDATI 75 (249)
Q Consensus 49 ~~~~~~kvGd~ClA~ys~Dg~wY~A~I 75 (249)
.....++.||....+-..|..|+.+++
T Consensus 23 ~~eLs~~~Gd~i~v~~~~~~~Ww~g~~ 49 (65)
T 3ulr_B 23 DDEISFDPDDIITNIEMIDDGWWRGVC 49 (65)
T ss_dssp TTBCCBCTTCEEEEEECCSSSEEEEEE
T ss_pred cCEeeEecCCEEEEEEecCCCEEEEEE
Confidence 345789999999988866778999884
No 137
>2khj_A 30S ribosomal protein S1; OB fold, acetylation, phosphoprotein, ribonucleoprotein, RNA-binding; NMR {Escherichia coli}
Probab=27.90 E-value=52 Score=24.32 Aligned_cols=34 Identities=15% Similarity=0.261 Sum_probs=24.5
Q ss_pred CCCEEEEEEeeEeCCeeEEEEecCCceEEEcCCCc
Q 025684 67 DGEWYDATIEAITPNGYYVTYDSWGNKEEVDPANV 101 (249)
Q Consensus 67 Dg~wY~A~I~~i~~~~~~V~F~~Ygn~E~V~~~~l 101 (249)
-|..|.++|..|.+.++.|.+.+ |-.-.|+.++|
T Consensus 31 ~G~iv~G~V~~v~~~G~fV~l~~-~~~Gll~~sel 64 (109)
T 2khj_A 31 KGAIVTGKVTAVDAKGATVELAD-GVEGYLRASEA 64 (109)
T ss_dssp SSSEEEEEEEEECSSCEEEECST-TCBCCBCTTCC
T ss_pred CCCEEEEEEEEEECCeEEEEECC-CCEEEEEHHHc
Confidence 35679999999998888777754 44556655555
No 138
>2djq_A SH3 domain containing ring finger 2; MUS musculus 0 DAY neonate head cDNA, riken FULL-length enriched library, clone:4831401O22, structural genomics; NMR {Mus musculus}
Probab=27.62 E-value=1.3e+02 Score=19.73 Aligned_cols=43 Identities=19% Similarity=0.323 Sum_probs=30.4
Q ss_pred CCCCCCCCCCeEEEEecCCCCEEEEEEeeEeCCeeEEEEecCCceEEEcCCCcccCC
Q 025684 49 DNQEKLAVGTKVQAVYSEDGEWYDATIEAITPNGYYVTYDSWGNKEEVDPANVRPVN 105 (249)
Q Consensus 49 ~~~~~~kvGd~ClA~ys~Dg~wY~A~I~~i~~~~~~V~F~~Ygn~E~V~~~~lrpl~ 105 (249)
.....++.||....+-..|..||.+++. |..-.+|.+.|+++.
T Consensus 21 ~~eLs~~~Gd~i~v~~~~~~~Ww~g~~~--------------g~~G~~P~~yv~~~~ 63 (68)
T 2djq_A 21 PGDLKFNKGDVILLRRQLDENWYQGEIN--------------GVSGIFPASSVEVIS 63 (68)
T ss_dssp TTCCCCCTTCEEEEEECCCSSEEEEEET--------------TEEEEEESSSEETTC
T ss_pred cCCccCCCCCEEEEEEecCCCEEEEEEC--------------CcEEEeehHHEEEcC
Confidence 3457899999998887667889988742 234456666666664
No 139
>3k8u_A Putative ABC transporter, ATP-binding protein COMA; cysteine protease, quorum-sensing, hydrolase; 1.90A {Streptococcus mutans}
Probab=27.59 E-value=69 Score=24.73 Aligned_cols=45 Identities=2% Similarity=-0.186 Sum_probs=31.4
Q ss_pred CCCCeEEEEecCCC-CEEEEEEeeEeCCeeEEEEecCC-ceEEEcCC
Q 025684 55 AVGTKVQAVYSEDG-EWYDATIEAITPNGYYVTYDSWG-NKEEVDPA 99 (249)
Q Consensus 55 kvGd~ClA~ys~Dg-~wY~A~I~~i~~~~~~V~F~~Yg-n~E~V~~~ 99 (249)
...-+|++.|..|| ...-++|..++++.+.|..-+.| ....++.+
T Consensus 79 ~~~lP~I~~~~~~g~~~hfvVl~~~~~~~v~I~DP~~g~~~~~ls~~ 125 (156)
T 3k8u_A 79 DLTYPFIVHVIKGKRLQHYYVVYGSQNNQLIIGDPDPSVKVTRMSKE 125 (156)
T ss_dssp TCCSCEEEEEEETTEEEEEEEEEEEETTEEEEEECSTTTEEEEEEHH
T ss_pred cCCCCEEEEEEecCCCcEEEEEEEEcCCEEEEEcCCCCcceEEEcHH
Confidence 45789999995565 23447778898877777777777 45666433
No 140
>1g8x_A Myosin II heavy chain fused to alpha-actinin 3; motor, lever ARM, protein engineering, structural protein; HET: ADP; 2.80A {Dictyostelium discoideum} SCOP: k.1.1.1
Probab=27.51 E-value=1.1e+02 Score=31.91 Aligned_cols=52 Identities=12% Similarity=0.115 Sum_probs=40.2
Q ss_pred CCCCCCeEE---EEecCCCCEEEEEEeeEeCCeeEEEEecCCceEEEcCCCcccCCc
Q 025684 53 KLAVGTKVQ---AVYSEDGEWYDATIEAITPNGYYVTYDSWGNKEEVDPANVRPVNL 106 (249)
Q Consensus 53 ~~kvGd~Cl---A~ys~Dg~wY~A~I~~i~~~~~~V~F~~Ygn~E~V~~~~lrpl~~ 106 (249)
.|..|..|- .. .++..|-.|+|.+..++.+.|...+ |..-+|+.++|.|+++
T Consensus 28 ~~~~~~~vW~~~v~-~~~~~~~~~~v~~~~~~~~~v~~~~-g~~~~v~~~~~~~~np 82 (1010)
T 1g8x_A 28 TVSDKRYIWYNPDP-DERDSYECGEIVSETSDSFTFKTVD-GQDRQVKKDDANQRNP 82 (1010)
T ss_dssp CCCCCCEEEECSST-TCTTCCEEEEEEEEETTEEEEECSS-SSEEEEETTTCCBCCC
T ss_pred chhcCCceeCccCc-CcccCeeEEEEEEecCCeEEEEecC-CcEEEecHHhccccCc
Confidence 689999873 22 3356799999999988888888654 6678888888887743
No 141
>1cka_A C-CRK N-terminal SH3 domain; complex (oncogene protein/peptide); 1.50A {Mus musculus} SCOP: b.34.2.1 PDB: 1ckb_A 1m3c_A 1m30_A 1m3b_A 1m3a_A
Probab=27.34 E-value=1.1e+02 Score=19.22 Aligned_cols=25 Identities=12% Similarity=0.355 Sum_probs=20.6
Q ss_pred CCCCCCCCCeEEEEecCCCCEEEEE
Q 025684 50 NQEKLAVGTKVQAVYSEDGEWYDAT 74 (249)
Q Consensus 50 ~~~~~kvGd~ClA~ys~Dg~wY~A~ 74 (249)
....++.||.....-..|+.|+.++
T Consensus 16 ~eLs~~~Gd~i~v~~~~~~~Ww~g~ 40 (57)
T 1cka_A 16 EDLPFKKGDILRIRDKPEEQWWNAE 40 (57)
T ss_dssp TBCCBCTTCEEEEEECSSSSEEEEE
T ss_pred CCCCCCCCCEEEEEEecCCCcEEEE
Confidence 3467999999998887678899887
No 142
>1b07_A Protein (proto-oncogene CRK (CRK)); SH3 domain, inhibitors, peptoids, protein-protein recognition, proline-rich motifs, signal transduction; 2.50A {Mus musculus} SCOP: b.34.2.1
Probab=27.20 E-value=1.1e+02 Score=20.28 Aligned_cols=25 Identities=12% Similarity=0.355 Sum_probs=20.9
Q ss_pred CCCCCCCCCeEEEEecCCCCEEEEE
Q 025684 50 NQEKLAVGTKVQAVYSEDGEWYDAT 74 (249)
Q Consensus 50 ~~~~~kvGd~ClA~ys~Dg~wY~A~ 74 (249)
....++.||....+-..|+.|+.++
T Consensus 18 ~eLsf~~Gd~i~v~~~~~~~Ww~g~ 42 (65)
T 1b07_A 18 EDLPFKKGDILRIRDKPEEQWWNAE 42 (65)
T ss_dssp TBCCBCTTCEEEEEECSSSSEEEEE
T ss_pred CccCCcCCCEEEEEEecCCCeEEEE
Confidence 4467999999999887778899887
No 143
>2d8j_A FYN-related kinase; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=27.19 E-value=1e+02 Score=20.76 Aligned_cols=28 Identities=18% Similarity=0.308 Sum_probs=22.9
Q ss_pred CCCCCCCCCCeEEEEecCCCCEEEEEEe
Q 025684 49 DNQEKLAVGTKVQAVYSEDGEWYDATIE 76 (249)
Q Consensus 49 ~~~~~~kvGd~ClA~ys~Dg~wY~A~I~ 76 (249)
.....|+.||....+-..|..|+.++..
T Consensus 21 ~~eLs~~~Gd~i~v~~~~~~~Ww~g~~~ 48 (77)
T 2d8j_A 21 AEDLSFRAGDKLQVLDTSHEGWWLARHL 48 (77)
T ss_dssp SSBCCBCTTCCEEEEECCSSSEEEEEEC
T ss_pred CCccCCCCCCEEEEEECCCCCeEEEEEC
Confidence 3457899999999998767889998876
No 144
>2do3_A Transcription elongation factor SPT5; KOW motif, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.34.5.5
Probab=27.13 E-value=1.6e+02 Score=20.88 Aligned_cols=50 Identities=16% Similarity=0.266 Sum_probs=33.9
Q ss_pred CCCCCCCCeEEEEecCCCCEEEEEEeeEeCCeeEEEEecCCceE-EEcCCCcc
Q 025684 51 QEKLAVGTKVQAVYSEDGEWYDATIEAITPNGYYVTYDSWGNKE-EVDPANVR 102 (249)
Q Consensus 51 ~~~~kvGd~ClA~ys~Dg~wY~A~I~~i~~~~~~V~F~~Ygn~E-~V~~~~lr 102 (249)
...|++||.|..+- +.-.=--..|..|.++ +.+.|.|-.+.| .|-..+|+
T Consensus 15 rK~F~~GDHVkVi~-G~~~getGlVV~v~~d-~v~v~SD~t~~Ei~V~~~dL~ 65 (69)
T 2do3_A 15 RKYFKMGDHVKVIA-GRFEGDTGLIVRVEEN-FVILFSDLTMHELKVLPRDLQ 65 (69)
T ss_dssp CSSCCTTCEEEESS-STTTTCEEEEEEECSS-CEEEEESSSCSEEEECTTSEE
T ss_pred eeeccCCCeEEEec-cEEcCceEEEEEEeCC-EEEEEeCCCCCEEEEEhHHhh
Confidence 36899999999984 2211125678888866 666777777655 56666665
No 145
>1jwi_B Platelet aggregation inducer; domain swapping, C-type lectin, toxin; 2.00A {Bitis arietans} SCOP: d.169.1.1 PDB: 1uex_B
Probab=26.97 E-value=92 Score=22.49 Aligned_cols=24 Identities=17% Similarity=0.088 Sum_probs=19.9
Q ss_pred CCCCCCCCeEEEEecCCCCEEEEE
Q 025684 51 QEKLAVGTKVQAVYSEDGEWYDAT 74 (249)
Q Consensus 51 ~~~~kvGd~ClA~ys~Dg~wY~A~ 74 (249)
...|..|..|.+++..+|.|+...
T Consensus 89 ~~~W~~g~pC~~~~~~~~~W~~~~ 112 (125)
T 1jwi_B 89 YRALSDEPICFVAESFHNKWIQWT 112 (125)
T ss_dssp SCCSCCSCEEEEEETTTCCEEEEE
T ss_pred cCCcCCCCCeEEEECCCCeEecCC
Confidence 467999999999997789998653
No 146
>2fpe_A C-JUN-amino-terminal kinase interacting protein 1; SRC-homology 3 (SH3) domain, all beta structure, signaling protein; HET: P6G; 1.75A {Rattus norvegicus} PDB: 2fpd_A*
Probab=26.97 E-value=1e+02 Score=19.82 Aligned_cols=27 Identities=19% Similarity=0.409 Sum_probs=21.1
Q ss_pred CCCCCCCCCCeEEEEecCCCCEEEEEE
Q 025684 49 DNQEKLAVGTKVQAVYSEDGEWYDATI 75 (249)
Q Consensus 49 ~~~~~~kvGd~ClA~ys~Dg~wY~A~I 75 (249)
.....++.||.....-..|..|+.++.
T Consensus 17 ~~eLs~~~Gd~i~v~~~~~~~W~~g~~ 43 (62)
T 2fpe_A 17 EDELELEVDDPLLVELQAEDYWYEAYN 43 (62)
T ss_dssp TTBCCBCTTCEEEEEEECTTSEEEEEE
T ss_pred cCcCcCCCCCEEEEEEecCCCEEEEEE
Confidence 345679999999987766778998873
No 147
>3ngp_A Spectrin alpha chain, brain; beta barrel, structural protein; 1.08A {Gallus gallus} PDB: 1e7o_A 1e6g_A 1e6h_A 1uue_A 1h8k_A 2lj3_A 1aey_A 1m8m_A 1shg_A 1u06_A 2nuz_A 2cdt_A 1hd3_A 2f2v_A 2f2w_A 2jm8_A 2jm9_A 2jma_A 3m0r_A 3m0p_A ...
Probab=26.85 E-value=1.2e+02 Score=19.22 Aligned_cols=27 Identities=11% Similarity=0.380 Sum_probs=22.0
Q ss_pred CCCCCCCCCCeEEEEecCCCCEEEEEE
Q 025684 49 DNQEKLAVGTKVQAVYSEDGEWYDATI 75 (249)
Q Consensus 49 ~~~~~~kvGd~ClA~ys~Dg~wY~A~I 75 (249)
.....++.||....+-..|..|+.++.
T Consensus 20 ~~eLs~~~Gd~i~v~~~~~~~Ww~~~~ 46 (62)
T 3ngp_A 20 PRELTVKKGDILTLLNSTNKDWWKIEV 46 (62)
T ss_dssp TTBCCBCTTCEEEEEECCSSSEEEEEE
T ss_pred CCCccCCCCCEEEEeEecCCCeEEEEE
Confidence 345789999999999877788999874
No 148
>2khi_A 30S ribosomal protein S1; acetylation, phosphoprotein, ribonucleoprotein, RNA-binding; NMR {Escherichia coli}
Probab=26.76 E-value=1e+02 Score=23.02 Aligned_cols=34 Identities=18% Similarity=0.356 Sum_probs=25.9
Q ss_pred CCCEEEEEEeeEeCCeeEEEEecCCceEEEcCCCc
Q 025684 67 DGEWYDATIEAITPNGYYVTYDSWGNKEEVDPANV 101 (249)
Q Consensus 67 Dg~wY~A~I~~i~~~~~~V~F~~Ygn~E~V~~~~l 101 (249)
-|..|.|+|..|.+.|+-|.+.+ |-.-.|+.++|
T Consensus 30 ~G~~~~G~V~~v~~~G~FV~l~~-~~~Glvhisel 63 (115)
T 2khi_A 30 EGTKLTGRVTNLTDYGCFVEIEE-GVEGLVHVSEM 63 (115)
T ss_dssp SSCEEEEEEEEEETTEEEEECST-TCEEEEETTSS
T ss_pred CCCEEEEEEEEEECCEEEEEECC-CCEEEEEHHHC
Confidence 45679999999999888777743 45677877666
No 149
>3mp6_A MBP, SGF29, maltose-binding periplasmic protein, linker, SAGA associated factor 29; histone, tudor domain, histone binding protei; HET: MLY MAL; 1.48A {Escherichia coli} PDB: 3mp1_A* 3mp8_A*
Probab=26.76 E-value=94 Score=28.85 Aligned_cols=56 Identities=16% Similarity=0.228 Sum_probs=40.5
Q ss_pred CCCCCCCCCeEEEE---ecCCCCEEEEEEeeEeCC--eeEEEEe--cCC----ceEEEcCCCcccCC
Q 025684 50 NQEKLAVGTKVQAV---YSEDGEWYDATIEAITPN--GYYVTYD--SWG----NKEEVDPANVRPVN 105 (249)
Q Consensus 50 ~~~~~kvGd~ClA~---ys~Dg~wY~A~I~~i~~~--~~~V~F~--~Yg----n~E~V~~~~lrpl~ 105 (249)
+....++||.|-|+ -++++.|--|+|.++.++ .|.|.=+ +=. ..=.++..+|-|||
T Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~wi~~~~~~~~~~~~~y~v~d~~~~~~~~~~~~~~~~~~~~~~~p 450 (522)
T 3mp6_A 384 PNAPILVGSEVAYKPRRGSADGEWIQCEVLKVVADGTRFEVRDPEPDELGNSGKVYKCNRKELLLIP 450 (522)
T ss_dssp CCCCBCTTCEEEECCC-----CCEEEEEEEEEETTTTEEEEEECSCBTTBTTCEEEEECGGGEEEEC
T ss_pred cccccCCCCEEEEecCCCCCCCCEEEEEEEEEeCCCCEEEEeCCCCCCCCCCCeeEEccHHHEEECC
Confidence 34568999999996 456889999999999864 4888777 322 24578888888887
No 150
>1x2q_A Signal transducing adapter molecule 2; SH3 domain, signal transducing adaptor molecule, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=26.74 E-value=1e+02 Score=21.61 Aligned_cols=28 Identities=18% Similarity=0.423 Sum_probs=22.5
Q ss_pred CCCCCCCCCCeEEEEecCCCCEEEEEEe
Q 025684 49 DNQEKLAVGTKVQAVYSEDGEWYDATIE 76 (249)
Q Consensus 49 ~~~~~~kvGd~ClA~ys~Dg~wY~A~I~ 76 (249)
.....|+.||....+-..|+.||.++..
T Consensus 31 ~~eLsf~~Gd~i~v~~~~~~~Ww~g~~~ 58 (88)
T 1x2q_A 31 DNELTFKHGEIIIVLDDSDANWWKGENH 58 (88)
T ss_dssp SSCCCCCSSCEEEEEECSCSSSEEEEET
T ss_pred cCccCCCCCCEEEEEEeCCCCEEEEEEC
Confidence 4457899999999988767889988763
No 151
>3cqt_A P59-FYN, proto-oncogene tyrosine-protein kinase FYN; beta barrel, ATP-binding, developmental protein, lipoprotein, manganese, metal-binding; 1.60A {Gallus gallus} PDB: 2l2p_A
Probab=26.63 E-value=1.1e+02 Score=21.05 Aligned_cols=46 Identities=24% Similarity=0.458 Sum_probs=31.0
Q ss_pred CCCCCCCCCeEEEEecCCCCEEEEEEeeEeCCeeEEEEecCCceEEEcCCCcccCCch
Q 025684 50 NQEKLAVGTKVQAVYSEDGEWYDATIEAITPNGYYVTYDSWGNKEEVDPANVRPVNLL 107 (249)
Q Consensus 50 ~~~~~kvGd~ClA~ys~Dg~wY~A~I~~i~~~~~~V~F~~Ygn~E~V~~~~lrpl~~l 107 (249)
....++.||....+-..|+.||.++... -|..-.+|.+.|.+++.+
T Consensus 20 ~eLs~~~Gd~i~vl~~~~~~Ww~g~~~~------------~g~~G~~P~~yv~~~~~~ 65 (79)
T 3cqt_A 20 DDLSFHKGEKFQILNSSEGDWWEARSLT------------TGETGYIPSIYLAPVDRL 65 (79)
T ss_dssp TBCCBCTTCEEEEEECTTSSEEEEEETT------------TCCEEEEEGGGEEEC---
T ss_pred CcCCCCCCCEEEEEEecCCCeEEEEECC------------CCCEEEeehHHeEECCcc
Confidence 3578999999999877778899887632 133456666667776543
No 152
>2k4k_A GSP13, general stress protein 13; cytoplasm, stress response, RNA binding protein; NMR {Bacillus subtilis}
Probab=26.62 E-value=84 Score=24.13 Aligned_cols=33 Identities=21% Similarity=0.409 Sum_probs=25.3
Q ss_pred CCEEEEEEeeEeCCeeEEEEecCCceEEEcCCCc
Q 025684 68 GEWYDATIEAITPNGYYVTYDSWGNKEEVDPANV 101 (249)
Q Consensus 68 g~wY~A~I~~i~~~~~~V~F~~Ygn~E~V~~~~l 101 (249)
|..|.++|..|+..|+-|.+.+ +..-.|+.++|
T Consensus 8 G~iv~G~V~~i~~~G~FV~l~~-~~~Glihisel 40 (130)
T 2k4k_A 8 GSVYTGKVTGLQAYGAFVALDE-ETQGLVHISEV 40 (130)
T ss_dssp TCEEEEEEEEEETTEEEEEEET-TEEEEEEGGGT
T ss_pred CCEEEEEEEEEeCCeEEEEECC-CcEEEEEHHHC
Confidence 5689999999999898888854 55667755555
No 153
>1x69_A Cortactin isoform A; SH3 domain, CTTN, oncogene EMS1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=26.56 E-value=1.2e+02 Score=20.61 Aligned_cols=43 Identities=12% Similarity=0.196 Sum_probs=29.9
Q ss_pred CCCCCCCCCCeEEEEecCCCCEEEEEEeeEeCCeeEEEEecCCceEEEcCCCcccCC
Q 025684 49 DNQEKLAVGTKVQAVYSEDGEWYDATIEAITPNGYYVTYDSWGNKEEVDPANVRPVN 105 (249)
Q Consensus 49 ~~~~~~kvGd~ClA~ys~Dg~wY~A~I~~i~~~~~~V~F~~Ygn~E~V~~~~lrpl~ 105 (249)
.....|+.||....+-..|+.|+.+++. |..-.+|.+.|.++.
T Consensus 31 ~~eLs~~~Gd~i~v~~~~~~~Ww~g~~~--------------g~~G~~P~~yv~~~~ 73 (79)
T 1x69_A 31 DDEISFDPDDIITNIEMIDDGWWRGVCK--------------GRYGLFPANYVELRQ 73 (79)
T ss_dssp SSBCCCCTTCEEEEEEECSSSEEEEEET--------------TEEEEEETTSEEECC
T ss_pred CCCcCcCCCCEEEEeEecCCCeEEEEEC--------------CcEEEechHHEEECC
Confidence 3457899999998887667789988742 334456666666654
No 154
>2g6f_X RHO guanine nucleotide exchange factor 7; SH3 domain, peptide interaction, signaling protein; HET: NCO; 0.92A {Rattus norvegicus} PDB: 2df6_A* 2p4r_A 2esw_A
Probab=26.32 E-value=1.2e+02 Score=19.22 Aligned_cols=26 Identities=19% Similarity=0.552 Sum_probs=21.1
Q ss_pred CCCCCCCCCeEEEEecCCCCEEEEEE
Q 025684 50 NQEKLAVGTKVQAVYSEDGEWYDATI 75 (249)
Q Consensus 50 ~~~~~kvGd~ClA~ys~Dg~wY~A~I 75 (249)
....++.||.....-..|..|+.++.
T Consensus 19 ~eLs~~~Gd~i~v~~~~~~~Ww~g~~ 44 (59)
T 2g6f_X 19 DELSFSKGDVIHVTRVEEGGWWEGTH 44 (59)
T ss_dssp TBCCBCTTCEEEEEEECTTSEEEEEE
T ss_pred CCcCCCCCCEEEEEEecCCCEEEEEE
Confidence 45779999999988766778998875
No 155
>1zlm_A Osteoclast stimulating factor 1; beta barrel, signaling protein; 1.07A {Homo sapiens}
Probab=25.94 E-value=1.3e+02 Score=19.04 Aligned_cols=26 Identities=15% Similarity=0.318 Sum_probs=21.6
Q ss_pred CCCCCCCCCeEEEEecCCCCEEEEEE
Q 025684 50 NQEKLAVGTKVQAVYSEDGEWYDATI 75 (249)
Q Consensus 50 ~~~~~kvGd~ClA~ys~Dg~wY~A~I 75 (249)
....++.||....+-..|..|+.++.
T Consensus 18 ~eLs~~~Gd~i~v~~~~~~~Ww~g~~ 43 (58)
T 1zlm_A 18 DELYFEEGDIIYITDMSDTNWWKGTS 43 (58)
T ss_dssp TBCCBCTTCEEEEEECCSSSEEEEEE
T ss_pred CCccCCCCCEEEEEEeCCCCEEEEEE
Confidence 35779999999998876778999985
No 156
>4f14_A Nebulette; SH3 domain, heart muscle, actin-binding protein-peptide COMP; 1.20A {Homo sapiens} PDB: 1ark_A 1neb_A 3i35_A
Probab=25.88 E-value=1.2e+02 Score=19.36 Aligned_cols=27 Identities=19% Similarity=0.357 Sum_probs=21.8
Q ss_pred CCCCCCCCCeEEEEecCCCCEEEEEEe
Q 025684 50 NQEKLAVGTKVQAVYSEDGEWYDATIE 76 (249)
Q Consensus 50 ~~~~~kvGd~ClA~ys~Dg~wY~A~I~ 76 (249)
....++.||....+-..|..|+.++..
T Consensus 21 ~eLs~~~Gd~i~v~~~~~~~W~~g~~~ 47 (64)
T 4f14_A 21 DEVSFRDGDYIVNVQPIDDGWMYGTVQ 47 (64)
T ss_dssp TBCCBCTTCEEEEEEECSSSEEEEEET
T ss_pred CcCCCCCCCEEEEEEeCCCCeEEEEEC
Confidence 357899999998887667789988874
No 157
>1wyx_A CRK-associated substrate; beta sheets, cell adhesion; 1.14A {Homo sapiens}
Probab=25.37 E-value=1.3e+02 Score=19.73 Aligned_cols=26 Identities=8% Similarity=0.303 Sum_probs=21.0
Q ss_pred CCCCCCCCCeEEEEecC---CCCEEEEEE
Q 025684 50 NQEKLAVGTKVQAVYSE---DGEWYDATI 75 (249)
Q Consensus 50 ~~~~~kvGd~ClA~ys~---Dg~wY~A~I 75 (249)
....++.||....+-.. |+.|+.+++
T Consensus 18 ~eLs~~~Gd~i~v~~~~~~~~~~Ww~g~~ 46 (69)
T 1wyx_A 18 DELSFRKGDIMTVLEQDTQGLDGWWLCSL 46 (69)
T ss_dssp TBCCBCTTCEEEEEETTGGGCTTEEEEEE
T ss_pred CccCCcCCCEEEEeECCCCCCCCcEEEEE
Confidence 35789999999998765 577999974
No 158
>4b3f_X DNA-binding protein smubp-2; hydrolase, helicase; 2.50A {Homo sapiens} PDB: 4b3g_A
Probab=25.24 E-value=1e+02 Score=29.61 Aligned_cols=40 Identities=13% Similarity=0.207 Sum_probs=30.2
Q ss_pred CCCCCCCCCeEEEEe-cC-CCCEEEEEEeeEeCCeeEEEEec
Q 025684 50 NQEKLAVGTKVQAVY-SE-DGEWYDATIEAITPNGYYVTYDS 89 (249)
Q Consensus 50 ~~~~~kvGd~ClA~y-s~-Dg~wY~A~I~~i~~~~~~V~F~~ 89 (249)
+.+.+.+||.|+..- .. ...+|.++|..|+.+.+.|.|..
T Consensus 77 ~~~~~~~Gd~v~~~~~~~~~~~~~~g~v~~~~~~~i~v~~~~ 118 (646)
T 4b3f_X 77 PSNSFTSGDIVGLYDAANEGSQLATGILTRVTQKSVTVAFDE 118 (646)
T ss_dssp CCCCCCTTCEEEEEETTTTSCCCEEEEEEEEETTEEEEECC-
T ss_pred ccCCCCCCCEEEEEecCCCCCceEEEEEEEEeCCEEEEEECC
Confidence 346899999987753 22 23589999999999888888864
No 159
>1zuy_A Myosin-5 isoform; SH3 domain, contractIle protein; 1.39A {Saccharomyces cerevisiae} PDB: 1yp5_A
Probab=25.20 E-value=1.3e+02 Score=18.87 Aligned_cols=27 Identities=15% Similarity=0.204 Sum_probs=21.8
Q ss_pred CCCCCCCCCeEEEEecCCCCEEEEEEe
Q 025684 50 NQEKLAVGTKVQAVYSEDGEWYDATIE 76 (249)
Q Consensus 50 ~~~~~kvGd~ClA~ys~Dg~wY~A~I~ 76 (249)
....++.||.....-..+..|+.++..
T Consensus 16 ~eLs~~~Gd~i~v~~~~~~gW~~g~~~ 42 (58)
T 1zuy_A 16 SELPLKKGDVIYITREEPSGWSLGKLL 42 (58)
T ss_dssp TBCCBCTTCEEEEEEECTTSEEEEEES
T ss_pred CcCCCCCCCEEEEEEecCCCeEEEEEC
Confidence 346799999998887667779998876
No 160
>2xmf_A Myosin 1E SH3; motor protein, SH3 domain; HET: DIA; 1.50A {Mus musculus}
Probab=24.97 E-value=1.3e+02 Score=19.10 Aligned_cols=26 Identities=4% Similarity=0.369 Sum_probs=21.5
Q ss_pred CCCCCCCCCeEEEEecCCCCEEEEEE
Q 025684 50 NQEKLAVGTKVQAVYSEDGEWYDATI 75 (249)
Q Consensus 50 ~~~~~kvGd~ClA~ys~Dg~wY~A~I 75 (249)
....++.||.....-..|..|+.++.
T Consensus 20 ~eLs~~~Gd~i~v~~~~~~~Ww~g~~ 45 (60)
T 2xmf_A 20 DELSFNANDIIDIIKEDPSGWWTGRL 45 (60)
T ss_dssp TBCCBCTTCEEEEEEECTTSEEEEEE
T ss_pred CCcCCCCCCEEEEEEecCCCEEEEEE
Confidence 45789999999988866778999987
No 161
>2drm_A Acanthamoeba myosin IB; SH3 domain, contractIle protein; 1.35A {Acanthamoeba} PDB: 2drk_A
Probab=24.81 E-value=1.3e+02 Score=18.85 Aligned_cols=26 Identities=8% Similarity=0.401 Sum_probs=21.3
Q ss_pred CCCCCCCCCeEEEEecCCCCEEEEEE
Q 025684 50 NQEKLAVGTKVQAVYSEDGEWYDATI 75 (249)
Q Consensus 50 ~~~~~kvGd~ClA~ys~Dg~wY~A~I 75 (249)
....++.||.....-..|..|+.++.
T Consensus 18 ~eLs~~~Gd~i~v~~~~~~~W~~g~~ 43 (58)
T 2drm_A 18 DELTFKEGDTIIVHQKDPAGWWEGEL 43 (58)
T ss_dssp TBCCBCTTCEEEEEECCTTSEEEEEE
T ss_pred CCcCCCCCCEEEEEEecCCCEEEEEE
Confidence 45789999999888766778998876
No 162
>1gl5_A Tyrosine-protein kinase TEC; transferase, ATP-binding, SH3 domain, phosphorylation; NMR {Mus musculus} SCOP: b.34.2.1
Probab=24.74 E-value=1.3e+02 Score=19.75 Aligned_cols=42 Identities=17% Similarity=0.245 Sum_probs=30.2
Q ss_pred CCCCCCCCCeEEEEecCCCCEEEEEEeeEeCCeeEEEEecCCceEEEcCCCcccC
Q 025684 50 NQEKLAVGTKVQAVYSEDGEWYDATIEAITPNGYYVTYDSWGNKEEVDPANVRPV 104 (249)
Q Consensus 50 ~~~~~kvGd~ClA~ys~Dg~wY~A~I~~i~~~~~~V~F~~Ygn~E~V~~~~lrpl 104 (249)
....++.||....+-..|+.|+.++.. . |..-.+|.+.|.++
T Consensus 17 ~eLs~~~Gd~i~v~~~~~~~Ww~g~~~--~-----------g~~G~~P~~yv~~~ 58 (67)
T 1gl5_A 17 HDLRLERGQEYIILEKNDLHWWRARDK--Y-----------GSEGYIPSNYVTGK 58 (67)
T ss_dssp SBCCBCTTCEEEEEECSSSSEEEEECS--S-----------SCEEEEETTSEESS
T ss_pred CeecCCcCCEEEEEEccCCCcEEEEEC--C-----------CCEEEEEhHhEEEc
Confidence 346799999999988777889988732 1 33456677777776
No 163
>1zx6_A YPR154WP; SH3 domain, protein binding; 1.60A {Saccharomyces cerevisiae} PDB: 1ynz_A
Probab=24.70 E-value=1.3e+02 Score=18.96 Aligned_cols=26 Identities=31% Similarity=0.465 Sum_probs=21.2
Q ss_pred CCCCCCCCCeEEEEecCCCCEEEEEE
Q 025684 50 NQEKLAVGTKVQAVYSEDGEWYDATI 75 (249)
Q Consensus 50 ~~~~~kvGd~ClA~ys~Dg~wY~A~I 75 (249)
....++.||.....-..|+.|+.++.
T Consensus 17 ~eLs~~~Gd~i~v~~~~~~~Ww~g~~ 42 (58)
T 1zx6_A 17 GDLGLKPGDKVQLLEKLSPEWYKGSC 42 (58)
T ss_dssp TBCCBCTTCEEEEEEECSSSEEEEEE
T ss_pred CCccCCCCCEEEEEEecCCCEEEEEE
Confidence 34679999999988766778999885
No 164
>2ak5_A RHO guanine nucleotide exchange factor 7; adaptor proteins, CIN85, PIX/COOL, protein-protein interaction, X-RAY, endocytosis; 1.85A {Rattus norvegicus} PDB: 1zsg_A
Probab=24.48 E-value=1.5e+02 Score=19.15 Aligned_cols=26 Identities=19% Similarity=0.552 Sum_probs=21.3
Q ss_pred CCCCCCCCCeEEEEecCCCCEEEEEE
Q 025684 50 NQEKLAVGTKVQAVYSEDGEWYDATI 75 (249)
Q Consensus 50 ~~~~~kvGd~ClA~ys~Dg~wY~A~I 75 (249)
....++.||.....-..|..|+.++.
T Consensus 21 ~eLs~~~Gd~i~v~~~~~~~Ww~g~~ 46 (64)
T 2ak5_A 21 DELSFSKGDVIHVTRVEEGGWWEGTH 46 (64)
T ss_dssp TBCCBCTTCEEEEEECCTTSEEEEEE
T ss_pred CcccCCCCCEEEEeEecCCCEEEEEE
Confidence 45789999999988866788998875
No 165
>2pqh_A Spectrin alpha chain, brain; SH3 domain, chimera, , structural protein; 1.75A {Gallus gallus}
Probab=24.45 E-value=1.3e+02 Score=20.58 Aligned_cols=26 Identities=12% Similarity=0.440 Sum_probs=21.3
Q ss_pred CCCCCCCCCeEEEEecCCCCEEEEEE
Q 025684 50 NQEKLAVGTKVQAVYSEDGEWYDATI 75 (249)
Q Consensus 50 ~~~~~kvGd~ClA~ys~Dg~wY~A~I 75 (249)
....|+.||....+-..|+.|+.++.
T Consensus 17 ~eLs~~~Gd~i~v~~~~~~~Ww~g~~ 42 (80)
T 2pqh_A 17 REVTMKKGDILTLLNSTNKDWWKVEV 42 (80)
T ss_dssp TBCCBCTTCEEEEEECCSSSEEEEEE
T ss_pred CccCCCCCCEEEEEEecCCCEEEEEE
Confidence 34679999999998876778998876
No 166
>2a19_A EIF-2- alpha, eukaryotic translation initiation factor 2 alpha; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Saccharomyces cerevisiae} PDB: 2a1a_A* 1q46_A
Probab=24.38 E-value=1.2e+02 Score=24.76 Aligned_cols=35 Identities=14% Similarity=0.184 Sum_probs=26.1
Q ss_pred CCCEEEEEEeeEeCCeeEEEEecCCc-eEEEcCCCc
Q 025684 67 DGEWYDATIEAITPNGYYVTYDSWGN-KEEVDPANV 101 (249)
Q Consensus 67 Dg~wY~A~I~~i~~~~~~V~F~~Ygn-~E~V~~~~l 101 (249)
-|..|.++|..|++.|+-|.+.+|++ .-.|+.++|
T Consensus 15 ~G~iv~G~V~~i~~fGaFV~L~e~~gveGLvhiSel 50 (175)
T 2a19_A 15 IDDIVMVNVQQIAEMGAYVKLLEYDNIEGMILLSEL 50 (175)
T ss_dssp TTCEEEEEEEEEETTEEEEEETTTTTCEEEEECC--
T ss_pred CCCEEEEEEEEEecceEEEEEcCCCCcEEEEEHHHc
Confidence 57789999999999999999976554 566755554
No 167
>3c0c_A Endophilin-A2; endocytosis, SH3, voltage-gated calcium channel, endosome, L binding, membrane, phosphoprotein, proto-oncogene, SH3 DOMA; 1.70A {Rattus norvegicus}
Probab=24.31 E-value=1.3e+02 Score=20.18 Aligned_cols=27 Identities=19% Similarity=0.459 Sum_probs=22.0
Q ss_pred CCCCCCCCCCeEEEEecCCCCEEEEEE
Q 025684 49 DNQEKLAVGTKVQAVYSEDGEWYDATI 75 (249)
Q Consensus 49 ~~~~~~kvGd~ClA~ys~Dg~wY~A~I 75 (249)
.....++.||.....-..|+.|+.+++
T Consensus 27 ~~eLs~~~Gd~i~v~~~~~~~W~~g~~ 53 (73)
T 3c0c_A 27 DGELGFREGDLITLTNQIDENWYEGML 53 (73)
T ss_dssp TTBCCBCTTCEEEEEEECSSSEEEEEE
T ss_pred CCCccCcCCCEEEEEEecCCCEEEEEE
Confidence 345789999999998866778999875
No 168
>2ed1_A 130 kDa phosphatidylinositol 4,5-biphosphate- dependent ARF1 GTPase-activating protein...; GTPase activation, membrane, metal-binding, SH3 domain; NMR {Homo sapiens} PDB: 2rqt_A 2rqu_A
Probab=24.21 E-value=92 Score=21.13 Aligned_cols=28 Identities=29% Similarity=0.486 Sum_probs=22.2
Q ss_pred CCCCCCCCCCeEEEEecCCCCEEEEEEe
Q 025684 49 DNQEKLAVGTKVQAVYSEDGEWYDATIE 76 (249)
Q Consensus 49 ~~~~~~kvGd~ClA~ys~Dg~wY~A~I~ 76 (249)
.....|+.||....+-..|..||.+++.
T Consensus 24 ~~eLsf~~Gd~i~v~~~~~~~Ww~g~~~ 51 (76)
T 2ed1_A 24 DDELTFIEGEVIIVTGEEDQEWWIGHIE 51 (76)
T ss_dssp SSBCCCCSSCEEEESSCCSSSEEEEEET
T ss_pred cCCcCcCCCCEEEEEEecCCCEEEEEEC
Confidence 4457899999998887567789998864
No 169
>2ysq_A RHO guanine nucleotide exchange factor 9; SH3 domain, CDC42 guanine nucleotide exchange factor (GEF) 9, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=24.11 E-value=1.3e+02 Score=20.67 Aligned_cols=27 Identities=11% Similarity=0.421 Sum_probs=22.1
Q ss_pred CCCCCCCCCCeEEEEecCCCCEEEEEE
Q 025684 49 DNQEKLAVGTKVQAVYSEDGEWYDATI 75 (249)
Q Consensus 49 ~~~~~~kvGd~ClA~ys~Dg~wY~A~I 75 (249)
.....|+.||....+-..|+.||.+++
T Consensus 24 ~~eLs~~~Gd~i~v~~~~~~~Ww~g~~ 50 (81)
T 2ysq_A 24 NRELAFKAGDVIKVLDASNKDWWWGQI 50 (81)
T ss_dssp SSSCCCCTTCEEEEEECCSSSEEEEEC
T ss_pred CCcCCCCCCCEEEEEEEcCcCEEEEEE
Confidence 345789999999998876888998875
No 170
>2fpf_A C-JUN-amino-terminal kinase interacting protein 1; scaffold protein 1, islet-brain-1, IB-1, mitogen-activated P kinase 8-interacting protein 1; 3.00A {Rattus norvegicus}
Probab=23.93 E-value=1.2e+02 Score=20.11 Aligned_cols=27 Identities=19% Similarity=0.409 Sum_probs=21.2
Q ss_pred CCCCCCCCCCeEEEEecCCCCEEEEEE
Q 025684 49 DNQEKLAVGTKVQAVYSEDGEWYDATI 75 (249)
Q Consensus 49 ~~~~~~kvGd~ClA~ys~Dg~wY~A~I 75 (249)
.....++.||....+-..|..|+.++.
T Consensus 20 ~~eLs~~~Gd~i~v~~~~~~gW~~g~~ 46 (71)
T 2fpf_A 20 EDELELEVDDPLLVELQAEDYWYEAYN 46 (71)
T ss_dssp TTBCCBCTTCEEEEEEECTTSEEEEEE
T ss_pred CCcccCcCCcEEEEeEecCCCEEEEEE
Confidence 345789999999988766778998874
No 171
>2dil_A Proline-serine-threonine phosphatase-interacting protein 1; SH3 domain, PEST phosphatase-interacting protein 1, CD2- binding protein 1; NMR {Homo sapiens}
Probab=23.58 E-value=1.6e+02 Score=19.37 Aligned_cols=27 Identities=11% Similarity=0.428 Sum_probs=21.8
Q ss_pred CCCCCCCCCCeEEEEecCCCCEEEEEE
Q 025684 49 DNQEKLAVGTKVQAVYSEDGEWYDATI 75 (249)
Q Consensus 49 ~~~~~~kvGd~ClA~ys~Dg~wY~A~I 75 (249)
.....++.||....+-..|..|+.++.
T Consensus 22 ~~eLs~~~Gd~i~v~~~~~~~Ww~g~~ 48 (69)
T 2dil_A 22 PDELDLSAGDILEVILEGEDGWWTVER 48 (69)
T ss_dssp SSSCCBCTTCEEEEEECCSSSEEEEEE
T ss_pred cCccCCCCCCEEEEEECCCCCEEEEEE
Confidence 345789999999999876777998875
No 172
>4esr_A Jouberin; AHI-1, AHI1, AHI-1 SH3 domain, SH3 domain, dynamin-2, protei binding, chronic myeloid leukemia; 1.53A {Homo sapiens}
Probab=23.49 E-value=1.4e+02 Score=19.61 Aligned_cols=26 Identities=12% Similarity=0.565 Sum_probs=21.0
Q ss_pred CCCCCCCCCeEEEEecCCCCEEEEEE
Q 025684 50 NQEKLAVGTKVQAVYSEDGEWYDATI 75 (249)
Q Consensus 50 ~~~~~kvGd~ClA~ys~Dg~wY~A~I 75 (249)
....++.||....+-..|+.|+.++.
T Consensus 21 ~eLs~~~Gd~i~v~~~~~~~Ww~g~~ 46 (69)
T 4esr_A 21 DELTIHRGDIIRVFFKDNEDWWYGSI 46 (69)
T ss_dssp TBCCBCTTCEEEEEEECSSSEEEEEE
T ss_pred CcCCCCCCCEEEEEEecCCCeEEEEe
Confidence 34789999999888766777999875
No 173
>3oym_A PFV integrase, P42IN; protein-DNA complex; HET: DNA; 2.02A {Human spumaretrovirus} PDB: 3oyn_A* 3s3o_A* 4be2_A* 3l2q_A 3l2s_A 3l2r_A* 3l2u_A* 3l2v_A* 3l2w_A* 3l2t_A* 3os1_A* 3os2_A* 3os0_A* 3oya_A* 3oy9_A* 3oyc_A* 3oyd_A* 3oye_A* 3oyb_A* 3oyg_A* ...
Probab=23.44 E-value=1.1e+02 Score=26.91 Aligned_cols=52 Identities=21% Similarity=0.236 Sum_probs=35.9
Q ss_pred CCCCCCCeEEEEecC--------CCCEEEEEEeeEeCCe-eEEEEecCCceEEEcCCCcccCCch
Q 025684 52 EKLAVGTKVQAVYSE--------DGEWYDATIEAITPNG-YYVTYDSWGNKEEVDPANVRPVNLL 107 (249)
Q Consensus 52 ~~~kvGd~ClA~ys~--------Dg~wY~A~I~~i~~~~-~~V~F~~Ygn~E~V~~~~lrpl~~l 107 (249)
..+++||.|+..-.. .|= -+|.++.+++ |.|. +.-|+...+..++|+|.+..
T Consensus 318 ~~~~~Gd~V~~~~~~~~Kl~~~w~GP---y~V~~~~~~~~~~l~-~~~g~~~~~~v~~Lkp~~~~ 378 (395)
T 3oym_A 318 WSPVVGQLVQERVARPASLRPRWHKP---STVLKVLNPRTVVIL-DHLGNNRTVSIDNLKPTSHQ 378 (395)
T ss_dssp ECCCTTCEEEEBCSSCCTTSCSBCCC---EEEEEEEETTEEEEE-CTTCCEEEEEGGGEEECSCC
T ss_pred ccCCCCcEEEEecCCCccCCcCCCCC---eEEEEEcCCCeEEEe-cCCCCcccEehhhccccCCC
Confidence 478999999987221 343 3577776554 5553 33377899999999998654
No 174
>1zuu_A BZZ1 protein; SH3 domain, unknown function; 0.97A {Saccharomyces cerevisiae} SCOP: b.34.2.1
Probab=23.42 E-value=1.4e+02 Score=18.75 Aligned_cols=26 Identities=15% Similarity=0.358 Sum_probs=20.7
Q ss_pred CCCCCCCCCeEEEEecCC-CCEEEEEE
Q 025684 50 NQEKLAVGTKVQAVYSED-GEWYDATI 75 (249)
Q Consensus 50 ~~~~~kvGd~ClA~ys~D-g~wY~A~I 75 (249)
....++.||....+-..| ..|+.++.
T Consensus 16 ~eLs~~~Gd~i~v~~~~~~~~W~~g~~ 42 (58)
T 1zuu_A 16 DEITITPGDKISLVARDTGSGWTKINN 42 (58)
T ss_dssp TBCCBCTTCCEEEEECCSSSSEEEEEE
T ss_pred CcccCCCCCEEEEeEcCCCCCCEEEEE
Confidence 457899999999887655 47999886
No 175
>2o9s_A Ponsin; SH3 domain, signaling protein; 0.83A {Homo sapiens} PDB: 2o31_A 2o9v_A 2o2w_A
Probab=23.39 E-value=1.1e+02 Score=20.06 Aligned_cols=29 Identities=17% Similarity=0.477 Sum_probs=22.9
Q ss_pred CCCCCCCCCCeEEEEecCCCCEEEEEEee
Q 025684 49 DNQEKLAVGTKVQAVYSEDGEWYDATIEA 77 (249)
Q Consensus 49 ~~~~~~kvGd~ClA~ys~Dg~wY~A~I~~ 77 (249)
.....++.||.....-..|+.|+.++...
T Consensus 20 ~~eLs~~~Gd~i~v~~~~~~~Ww~g~~~~ 48 (67)
T 2o9s_A 20 QVEMSFRKGERITLLRQVDENWYEGRIPG 48 (67)
T ss_dssp TTBCCBCTTCEEEEEEECSSSEEEEECTT
T ss_pred cCccCCCCCCEEEEEEecCCCEEEEEECC
Confidence 34578999999998876677899888754
No 176
>3a98_A DOCK2, dedicator of cytokinesis protein 2; protein-protein complex, DOCK2, ELMO1, SH3 domain, PH domain bundle, proline-rich sequence, cytoskeleton; 2.10A {Homo sapiens}
Probab=23.25 E-value=87 Score=25.42 Aligned_cols=26 Identities=23% Similarity=0.415 Sum_probs=21.7
Q ss_pred CCCCCCCCCCeEEEEecCCCCEEEEEE
Q 025684 49 DNQEKLAVGTKVQAVYSEDGEWYDATI 75 (249)
Q Consensus 49 ~~~~~~kvGd~ClA~ys~Dg~wY~A~I 75 (249)
.....|++||.+...-..|| ||.+.+
T Consensus 31 ~~eLs~~~Gd~i~v~~~~~~-W~~g~~ 56 (184)
T 3a98_A 31 APQLSLQIGDVVRIQETCGD-WYRGYL 56 (184)
T ss_dssp TTBCCBCTTCEEEEEEEETT-EEEEEE
T ss_pred CCCCCcCCCCEEEEEecCCC-EEEEEE
Confidence 44578999999998876677 999998
No 177
>4glm_A Dynamin-binding protein; SH3 domain, DNMBP, structural genomics, structural genomics consortium, SGC, SRC homology 3 domains, cell junctions; 1.90A {Homo sapiens}
Probab=23.12 E-value=1.1e+02 Score=20.06 Aligned_cols=27 Identities=19% Similarity=0.538 Sum_probs=21.5
Q ss_pred CCCCCCCCCCeEEEEecCCCCEEEEEE
Q 025684 49 DNQEKLAVGTKVQAVYSEDGEWYDATI 75 (249)
Q Consensus 49 ~~~~~~kvGd~ClA~ys~Dg~wY~A~I 75 (249)
.....|+.||....+-..|..||.+++
T Consensus 27 ~~eLs~~~Gd~i~v~~~~~~~W~~g~~ 53 (72)
T 4glm_A 27 PNELDFEVGDKIRILATLEDGWLEGSL 53 (72)
T ss_dssp TTBCCBCTTCEEEEEEECSTTEEEEEE
T ss_pred CCcCCCCCCCEEEEEEccCCCEEEEEE
Confidence 345789999999888756777999884
No 178
>2j6f_A CD2-associated protein; metal-binding, immune response, SH3, SH2 domain, SH3 zinc-finger, SH3- binding, UBL conjugation pathway; 1.7A {Homo sapiens} PDB: 2j6k_A 2j6o_A 2j7i_A 2krm_A
Probab=23.08 E-value=1.5e+02 Score=19.07 Aligned_cols=26 Identities=15% Similarity=0.511 Sum_probs=20.7
Q ss_pred CCCCCCCCCeEEEEec-CCCCEEEEEE
Q 025684 50 NQEKLAVGTKVQAVYS-EDGEWYDATI 75 (249)
Q Consensus 50 ~~~~~kvGd~ClA~ys-~Dg~wY~A~I 75 (249)
....++.||.....-. .|+.|+.+++
T Consensus 16 ~eLs~~~Gd~i~v~~~~~~~~Ww~g~~ 42 (62)
T 2j6f_A 16 DELTIRVGEIIRNVKKLQEEGWLEGEL 42 (62)
T ss_dssp TBCCBCTTCEEEEEEECSSTTEEEEEE
T ss_pred CCcCCcCCCEEEEEEecCCCCEEEEEE
Confidence 3467999999988775 6778998874
No 179
>1x2k_A OSTF1, osteoclast stimulating factor 1; SH3 domain, human osteoclast stimulating factor 1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=23.00 E-value=1.6e+02 Score=19.30 Aligned_cols=27 Identities=15% Similarity=0.298 Sum_probs=21.8
Q ss_pred CCCCCCCCCCeEEEEecCCCCEEEEEE
Q 025684 49 DNQEKLAVGTKVQAVYSEDGEWYDATI 75 (249)
Q Consensus 49 ~~~~~~kvGd~ClA~ys~Dg~wY~A~I 75 (249)
.....++.||....+-..|..|+.++.
T Consensus 21 ~~eLs~~~Gd~i~v~~~~~~~Ww~g~~ 47 (68)
T 1x2k_A 21 PDELYFEEGDIIYITDMSDTNWWKGTS 47 (68)
T ss_dssp TTBCCCCSSCEEEEEECSCSSEEEEES
T ss_pred CCcccCCCCCEEEEEEcCCCCEEEEEE
Confidence 345789999999998777778998874
No 180
>3thk_A Spectrin alpha chain, brain; SH3 domain, chimera, structural protein; 1.70A {Rattus norvegicus} SCOP: b.34.2.1
Probab=22.92 E-value=1.5e+02 Score=19.57 Aligned_cols=27 Identities=11% Similarity=0.415 Sum_probs=21.6
Q ss_pred CCCCCCCCCCeEEEEecCCCCEEEEEE
Q 025684 49 DNQEKLAVGTKVQAVYSEDGEWYDATI 75 (249)
Q Consensus 49 ~~~~~~kvGd~ClA~ys~Dg~wY~A~I 75 (249)
.....|+.||....+-..|..||.+++
T Consensus 19 ~~eLs~~~Gd~i~v~~~~~~~Ww~g~~ 45 (73)
T 3thk_A 19 PREVTMKKGDILTLLNSTNKDWWKVEV 45 (73)
T ss_dssp TTBCCBCTTCEEEEEECCSSSEEEEEE
T ss_pred CCccCCCCCCEEEEEECCCCCeEEEEE
Confidence 345789999999998876778998863
No 181
>1ruw_A Myosin-3 isoform, MYO3; SH3 domain, yeast, high-throughput, structural genomics, contractIle protein; 1.80A {Saccharomyces cerevisiae} PDB: 2btt_A 1va7_A
Probab=22.88 E-value=1.2e+02 Score=20.02 Aligned_cols=27 Identities=22% Similarity=0.207 Sum_probs=21.6
Q ss_pred CCCCCCCCCeEEEEecCCCCEEEEEEe
Q 025684 50 NQEKLAVGTKVQAVYSEDGEWYDATIE 76 (249)
Q Consensus 50 ~~~~~kvGd~ClA~ys~Dg~wY~A~I~ 76 (249)
....++.||....+-..|+.|+.++..
T Consensus 18 ~eLs~~~Gd~i~v~~~~~~~W~~g~~~ 44 (69)
T 1ruw_A 18 SELPLKKGDIVFISRDEPSGWSLAKLL 44 (69)
T ss_dssp TBCCBCTTCEEEEEEECTTSEEEEEET
T ss_pred CcccCCCCCEEEEEEecCCCeEEEEEC
Confidence 346799999999887667779988765
No 182
>2dl5_A KIAA0769 protein; SH3 domain, FCHSD2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=22.84 E-value=1.6e+02 Score=19.91 Aligned_cols=44 Identities=11% Similarity=0.180 Sum_probs=30.9
Q ss_pred CCCCCCCCCCeEEEEecCC-CCEEEEEEeeEeCCeeEEEEecCCceEEEcCCCcccCC
Q 025684 49 DNQEKLAVGTKVQAVYSED-GEWYDATIEAITPNGYYVTYDSWGNKEEVDPANVRPVN 105 (249)
Q Consensus 49 ~~~~~~kvGd~ClA~ys~D-g~wY~A~I~~i~~~~~~V~F~~Ygn~E~V~~~~lrpl~ 105 (249)
.....++.||....+-..| +.|+.++... |..-.||.+.|.+++
T Consensus 27 ~~eLs~~~Gd~i~v~~~~~~~~Ww~g~~~~-------------g~~G~~P~~yv~~~~ 71 (78)
T 2dl5_A 27 PDELTIEEHEVLEVIEDGDMEDWVKARNKV-------------GQVGYVPEKYLQFPT 71 (78)
T ss_dssp TTBCCBCSSEEEEEEECCSSSSEEEEECTT-------------CCEEEEETTTSCCSC
T ss_pred CCCCCCCCCCEEEEEeccCCCCcEEEEeCC-------------CCEEEEEhHHEEECC
Confidence 3457899999999988654 7799887541 344567777777664
No 183
>2dl3_A Sorbin and SH3 domain-containing protein 1; ponsin, C-CBL-associated protein, CAP, SH3 domain protein 5 SH3P12, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2dlm_A
Probab=22.66 E-value=1.4e+02 Score=19.44 Aligned_cols=43 Identities=16% Similarity=0.220 Sum_probs=29.8
Q ss_pred CCCCCCCCCCeEEEEecCCCCEEEEEEeeEeCCeeEEEEecCCceEEEcCCCcccCC
Q 025684 49 DNQEKLAVGTKVQAVYSEDGEWYDATIEAITPNGYYVTYDSWGNKEEVDPANVRPVN 105 (249)
Q Consensus 49 ~~~~~~kvGd~ClA~ys~Dg~wY~A~I~~i~~~~~~V~F~~Ygn~E~V~~~~lrpl~ 105 (249)
.....++.||....+-..|+.|+.+++. |..-.+|.+.|.+++
T Consensus 21 ~~eLs~~~Gd~i~v~~~~~~~W~~g~~~--------------g~~G~~P~~yv~~~~ 63 (68)
T 2dl3_A 21 LKELPLQKGDIVYIYKQIDQNWYEGEHH--------------GRVGIFPRTYIELLS 63 (68)
T ss_dssp TTBCCBCTTCEEEEEECCSTTEEEEECS--------------SCEEEEETTTEEECC
T ss_pred cCCccCCCCCEEEEeEecCCCEEEEEEC--------------CCEEEEchHHEEECC
Confidence 3457899999999887667789988732 233455666666653
No 184
>2ydl_A SH3 domain-containing kinase-binding protein 1; signaling protein; 2.05A {Homo sapiens} PDB: 2k6d_A
Probab=22.56 E-value=1.6e+02 Score=19.76 Aligned_cols=26 Identities=15% Similarity=0.484 Sum_probs=20.7
Q ss_pred CCCCCCCCCeEEEEecC--CCCEEEEEE
Q 025684 50 NQEKLAVGTKVQAVYSE--DGEWYDATI 75 (249)
Q Consensus 50 ~~~~~kvGd~ClA~ys~--Dg~wY~A~I 75 (249)
....++.||....+-.. |+.|+.++.
T Consensus 17 ~eLs~~~Gd~i~vl~~~~~~~gWw~g~~ 44 (69)
T 2ydl_A 17 DELTIKEGDIVTLINKDCIDVGWWEGEL 44 (69)
T ss_dssp TBCCBCTTCEEEEEESCCSSTTEEEEEE
T ss_pred CccccCCCCEEEEEEcCCCCCCEEEEEE
Confidence 35789999999998753 677998875
No 185
>2jt4_A Cytoskeleton assembly control protein SLA1; endocytosis, SH3, actin-binding, cytoplasm, cytoskeleton, phosphorylation, SH3 domain, DNA damage, DNA repair, nucleus; NMR {Saccharomyces cerevisiae}
Probab=22.36 E-value=1.7e+02 Score=19.22 Aligned_cols=27 Identities=15% Similarity=0.441 Sum_probs=21.1
Q ss_pred CCCCCCCCCCeEEEEecC-CCCEEEEEE
Q 025684 49 DNQEKLAVGTKVQAVYSE-DGEWYDATI 75 (249)
Q Consensus 49 ~~~~~~kvGd~ClA~ys~-Dg~wY~A~I 75 (249)
.....++.||....+-.. +..|+.++.
T Consensus 20 ~~eLs~~~Gd~i~v~~~~~~~~Ww~g~~ 47 (71)
T 2jt4_A 20 QDELTIKSGDKVYILDDKKSKDWWMCQL 47 (71)
T ss_dssp TTBCCBCTTCEEEEEESSSCSSEEEEEE
T ss_pred CCcccCCCCCEEEEEECCCCCCCEEEEE
Confidence 345789999999988754 677998876
No 186
>2nwm_A Vinexin; cell adhesion; NMR {Homo sapiens}
Probab=21.90 E-value=1.1e+02 Score=20.17 Aligned_cols=26 Identities=19% Similarity=0.272 Sum_probs=20.8
Q ss_pred CCCCCCCCCeEEEEecCCCCEEEEEE
Q 025684 50 NQEKLAVGTKVQAVYSEDGEWYDATI 75 (249)
Q Consensus 50 ~~~~~kvGd~ClA~ys~Dg~wY~A~I 75 (249)
....++.||.....-..|+.|+.++.
T Consensus 16 ~eLs~~~Gd~i~v~~~~~~~Ww~g~~ 41 (65)
T 2nwm_A 16 KELTLQKGDIVYIHKEVDKNWLEGEH 41 (65)
T ss_dssp TBCCBCTTCEEEEEECCTTTCEEEEE
T ss_pred CccCCcCCCEEEEEEecCCCEEEEEE
Confidence 34679999999988766778998874
No 187
>2yuo_A CIP85, RUN and TBC1 domain containing 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=21.79 E-value=1.6e+02 Score=19.86 Aligned_cols=26 Identities=4% Similarity=0.138 Sum_probs=21.2
Q ss_pred CCCCCCCCCeEEEEecCCCCEEEEEE
Q 025684 50 NQEKLAVGTKVQAVYSEDGEWYDATI 75 (249)
Q Consensus 50 ~~~~~kvGd~ClA~ys~Dg~wY~A~I 75 (249)
....|+.||....+-..|+.|+.+++
T Consensus 22 ~eLs~~~Gd~i~v~~~~~~~Ww~g~~ 47 (78)
T 2yuo_A 22 DELGFRKNDIITIISQKDEHCWVGEL 47 (78)
T ss_dssp TBCCBCTTCEEEEEECCSSSEEEEEE
T ss_pred CCccCCCCCEEEEEEecCCCEEEEEE
Confidence 45789999999998867888988764
No 188
>1x2p_A Protein arginine N-methyltransferase 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=21.63 E-value=1.8e+02 Score=19.03 Aligned_cols=43 Identities=14% Similarity=0.231 Sum_probs=29.8
Q ss_pred CCCCCCCCCCeEEEEecCCCCEEEEEEeeEeCCeeEEEEecCCceEEEcCCCcccCC
Q 025684 49 DNQEKLAVGTKVQAVYSEDGEWYDATIEAITPNGYYVTYDSWGNKEEVDPANVRPVN 105 (249)
Q Consensus 49 ~~~~~~kvGd~ClA~ys~Dg~wY~A~I~~i~~~~~~V~F~~Ygn~E~V~~~~lrpl~ 105 (249)
.....++.||....+-..|..|+.+++. |..-.+|.+.|.+++
T Consensus 21 ~~eLs~~~Gd~i~v~~~~~~~Ww~g~~~--------------g~~G~~P~~yv~~~~ 63 (68)
T 1x2p_A 21 ETQLSFLRGEKILILRQTTADWWWGERA--------------GCCGYIPANHVGKHS 63 (68)
T ss_dssp TTBCCCCTTCEEEEEECCSSSEEEEECT--------------TCCEEEESSSEECCC
T ss_pred cCCcCCCCCCEEEEEEcCCCCEEEEEEC--------------CeEEEEehHHeEECC
Confidence 3457899999999888667789988742 234456666666553
No 189
>2eyx_A V-CRK sarcoma virus CT10 oncogene homolog isoform A; SH3, signaling protein; NMR {Homo sapiens}
Probab=21.59 E-value=80 Score=20.93 Aligned_cols=25 Identities=16% Similarity=0.142 Sum_probs=20.5
Q ss_pred CCCCCCCCeEEEEecCCCCEEEEEE
Q 025684 51 QEKLAVGTKVQAVYSEDGEWYDATI 75 (249)
Q Consensus 51 ~~~~kvGd~ClA~ys~Dg~wY~A~I 75 (249)
...++.||.....-..|+.|+.+.+
T Consensus 24 eLs~~~Gd~i~v~~~~~~gWw~g~~ 48 (67)
T 2eyx_A 24 ALALEVGELVKVTKINVSGQWEGEC 48 (67)
T ss_dssp BCCBCSSEEEEEEEECTTSEEEEEE
T ss_pred ccccCCCCEEEEEEecCCCEEEEEE
Confidence 5679999999988766778998854
No 190
>1ib8_A Conserved protein SP14.3; nucleic acid binding protein, ribosomal protein, essential gene, structural genomics; NMR {Streptococcus pneumoniae} SCOP: b.38.2.1 d.52.4.1
Probab=21.46 E-value=2.2e+02 Score=22.81 Aligned_cols=49 Identities=14% Similarity=0.182 Sum_probs=36.1
Q ss_pred CCCCeEEEEec---CCCCEEEEEEeeEeCCeeEEEEecCC--ceEEEcCCCccc
Q 025684 55 AVGTKVQAVYS---EDGEWYDATIEAITPNGYYVTYDSWG--NKEEVDPANVRP 103 (249)
Q Consensus 55 kvGd~ClA~ys---~Dg~wY~A~I~~i~~~~~~V~F~~Yg--n~E~V~~~~lrp 103 (249)
-+|..+..... .+.+.|.++|.+++++.+++.+.+-. ....+++++|..
T Consensus 102 ~~G~~V~V~l~~~~~g~k~~~G~L~~~~~~~v~l~~~~k~~~~~~~i~~~~I~k 155 (164)
T 1ib8_A 102 AVGKYIHVGLYQAIDKQKVFEGTLLAFEEDELTMEYMDKTRKKTVQIPYSLVSK 155 (164)
T ss_dssp HCSEEEEEECSSCSSSCSEEEEEEEEEETTEEEEEEECSSCEEEEEECSSCCSS
T ss_pred hCCcEEEEEEecccCCceEEEEEEEEEeCCEEEEEEecccCCeEEEEEHHHCcE
Confidence 47999998873 34489999999999998888876522 245577777654
No 191
>2rms_B MSIN3A-binding protein; protein/protein interaction, PAH domain, SIN3 corepressor, transcription repression, transcription regulation; NMR {Mus musculus}
Probab=21.08 E-value=80 Score=21.66 Aligned_cols=16 Identities=25% Similarity=0.314 Sum_probs=11.4
Q ss_pred hhhhhHHHHHHHhhhc
Q 025684 2 QVIALTEELLATAKQN 17 (249)
Q Consensus 2 EvI~LT~dLl~~~~~~ 17 (249)
|+|+||-=|--+|.+.
T Consensus 9 ElIALtGLLQMSQGep 24 (61)
T 2rms_B 9 EMIALAGLLQMSQGEQ 24 (61)
T ss_dssp HHHHHHHHHHHTTTTS
T ss_pred HHHHHHHHHHHhcCCC
Confidence 8999997666665443
No 192
>4ag1_C Fynomer; hydrolase-de novo protein complex, inhibitor, serine proteas; 1.40A {Synthetic construct} PDB: 4afz_C 4ag2_C* 4afq_C* 4afs_C 4afu_C 1azg_B 1nyf_A 1nyg_A 1a0n_B 3ua7_A 3ua6_A 1fyn_A 1m27_C* 1shf_A 1zbj_A 1efn_A 1avz_C 1nlo_C* 1nlp_C* 1qwe_A ...
Probab=20.95 E-value=1.6e+02 Score=20.50 Aligned_cols=46 Identities=22% Similarity=0.404 Sum_probs=31.3
Q ss_pred CCCCCCCCCeEEEEecCCCCEEEEEEeeEeCCeeEEEEecCCceEEEcCCCcccCCch
Q 025684 50 NQEKLAVGTKVQAVYSEDGEWYDATIEAITPNGYYVTYDSWGNKEEVDPANVRPVNLL 107 (249)
Q Consensus 50 ~~~~~kvGd~ClA~ys~Dg~wY~A~I~~i~~~~~~V~F~~Ygn~E~V~~~~lrpl~~l 107 (249)
....|+.||....+-..|+.||.++... + |..-.+|.+.|.++..+
T Consensus 21 ~eLsf~~Gd~i~vl~~~~~~Ww~g~~~~---~---------g~~G~~P~~yv~~~~~~ 66 (84)
T 4ag1_C 21 TDLSFHKGEKFQILEFGPGDWWEARSLT---T---------GETGYIPSNYVAPVDSI 66 (84)
T ss_dssp TBCCBCTTCEEEEEECCSSSEEEEEETT---T---------CCEEEEEGGGEEETTTC
T ss_pred CcccccCCCEEEEEEecCCCeEEEEECC---C---------CCEEEEehHHeEECCCc
Confidence 4578999999998886677899888741 1 22344566666666543
No 193
>2jte_A CD2-associated protein; SH3 domain, coiled coil, cytoplasm, phosphorylation, SH3-binding, signaling protein; NMR {Mus musculus} PDB: 2kro_A
Probab=20.84 E-value=1.8e+02 Score=18.72 Aligned_cols=27 Identities=11% Similarity=0.497 Sum_probs=20.7
Q ss_pred CCCCCCCCCCeEEEEecC--CCCEEEEEE
Q 025684 49 DNQEKLAVGTKVQAVYSE--DGEWYDATI 75 (249)
Q Consensus 49 ~~~~~~kvGd~ClA~ys~--Dg~wY~A~I 75 (249)
.....++.||.....-.. |..|+.+++
T Consensus 20 ~~eLs~~~Gd~i~v~~~~~~~~~W~~g~~ 48 (64)
T 2jte_A 20 EDELTFREGEIIHLISKETGEAGWWKGEL 48 (64)
T ss_dssp SSBCCBCTTCEEEEEESCSSSTTEEEEEE
T ss_pred CCccCCCCCCEEEEEECCCCCCCEEEEEE
Confidence 345789999999988643 567999875
No 194
>2gnc_A SLIT-ROBO RHO GTPase-activating protein 1; beta barrel, signaling protein; 1.80A {Mus musculus}
Probab=20.72 E-value=1.2e+02 Score=19.36 Aligned_cols=26 Identities=8% Similarity=0.303 Sum_probs=20.9
Q ss_pred CCCCCCCCCeEEEEecCCCCEEEEEE
Q 025684 50 NQEKLAVGTKVQAVYSEDGEWYDATI 75 (249)
Q Consensus 50 ~~~~~kvGd~ClA~ys~Dg~wY~A~I 75 (249)
....++.||....+-..|+.|+.+++
T Consensus 21 ~eLs~~~Gd~i~v~~~~~~~Ww~g~~ 46 (60)
T 2gnc_A 21 RELSFKKGASLLLYHRASEDWWEGRH 46 (60)
T ss_dssp TBCCBCTTCEEEEEEEEETTEEEEEE
T ss_pred CCcCCCCCCEEEEEEecCCCEEEEEE
Confidence 45789999999888765677999887
No 195
>2ed0_A ABL interactor 2; coiled coil, cytoskeleton, nuclear protein, phosphorylation, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=20.72 E-value=1.6e+02 Score=20.01 Aligned_cols=27 Identities=15% Similarity=0.545 Sum_probs=21.6
Q ss_pred CCCCCCCCCCeEEEEecCCCCEEEEEE
Q 025684 49 DNQEKLAVGTKVQAVYSEDGEWYDATI 75 (249)
Q Consensus 49 ~~~~~~kvGd~ClA~ys~Dg~wY~A~I 75 (249)
.....|+.||....+-..|..|+.+++
T Consensus 31 ~~eLsf~~Gd~i~v~~~~~~gWw~g~~ 57 (78)
T 2ed0_A 31 EDELSFQEGAIIYVIKKNDDGWYEGVM 57 (78)
T ss_dssp TTBCCBCSSCEEEEEEECSSSEEEEEE
T ss_pred cCcccccCCCEEEEEEeCCCCEEEEEE
Confidence 345789999999988766777998874
No 196
>1oot_A Hypothetical 40.4 kDa protein in PES4-His2 intergenic region; SH3 domain, sturctural genomics, structural genomics; 1.39A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 1ssh_A 2a08_A
Probab=20.49 E-value=1.7e+02 Score=18.49 Aligned_cols=27 Identities=7% Similarity=0.384 Sum_probs=21.2
Q ss_pred CCCCCCCCCCeEEEEecC--CCCEEEEEE
Q 025684 49 DNQEKLAVGTKVQAVYSE--DGEWYDATI 75 (249)
Q Consensus 49 ~~~~~~kvGd~ClA~ys~--Dg~wY~A~I 75 (249)
.....++.||....+-.. +..|+.++.
T Consensus 17 ~~eLs~~~Gd~i~v~~~~~~~~~Ww~g~~ 45 (60)
T 1oot_A 17 SGDLPFRKGDVITILKKSDSQNDWWTGRV 45 (60)
T ss_dssp TTBCCBCTTCEEEEEECCSCTTSEEEEEE
T ss_pred cCEeeEcCCCEEEEEEeCCCCCCeEEEEE
Confidence 345789999999998754 567999886
No 197
>2bzy_A CRK-like protein, CRKL SH3C; SH3 domain, dimer, nuclear export; 2.5A {Homo sapiens} PDB: 2bzx_A
Probab=20.38 E-value=1.1e+02 Score=20.19 Aligned_cols=26 Identities=15% Similarity=0.196 Sum_probs=20.5
Q ss_pred CCCCCCCCCeEEEEecCCCCEEEEEE
Q 025684 50 NQEKLAVGTKVQAVYSEDGEWYDATI 75 (249)
Q Consensus 50 ~~~~~kvGd~ClA~ys~Dg~wY~A~I 75 (249)
....++.||....+-..|+.|+.+.+
T Consensus 18 ~eLsf~~Gd~i~v~~~~~~~Ww~g~~ 43 (67)
T 2bzy_A 18 TALALEVGDIVKVTRMNINGQWEGEV 43 (67)
T ss_dssp TBCCBCTTCEEEEEEECSSSEEEEEE
T ss_pred CccccCCCCEEEEEEecCCCeEEEEe
Confidence 34679999999988766778998854
No 198
>1csk_A C-SRC SH3 domain; phosphotransferase; 2.50A {Homo sapiens} SCOP: b.34.2.1
Probab=20.28 E-value=1.7e+02 Score=19.28 Aligned_cols=26 Identities=23% Similarity=0.520 Sum_probs=20.7
Q ss_pred CCCCCCCCCCeEEEEe-cCCCCEEEEE
Q 025684 49 DNQEKLAVGTKVQAVY-SEDGEWYDAT 74 (249)
Q Consensus 49 ~~~~~~kvGd~ClA~y-s~Dg~wY~A~ 74 (249)
.....++.||....+- ..|+.|+.++
T Consensus 25 ~~eLs~~~Gd~i~v~~~~~~~~Ww~g~ 51 (71)
T 1csk_A 25 EQDLPFCKGDVLTIVAVTKDPNWYKAK 51 (71)
T ss_dssp TTBCCBCTTCEEEEEEECSSTTEEEEE
T ss_pred CCcCCCCCCCEEEEeECCCCCCCEEEE
Confidence 3457899999998887 5677899887
No 199
>2yt6_A Adult MALE urinary bladder cDNA, riken FULL- length enriched library, clone:9530076O17...; SH3_1 domain; NMR {Mus musculus}
Probab=20.27 E-value=2.4e+02 Score=20.14 Aligned_cols=47 Identities=19% Similarity=0.423 Sum_probs=32.1
Q ss_pred CCCCCCCCCCeEEEEecCCCCEEEEEEeeEeCCeeEEEEecCCceEEEcCCCcccCCch
Q 025684 49 DNQEKLAVGTKVQAVYSEDGEWYDATIEAITPNGYYVTYDSWGNKEEVDPANVRPVNLL 107 (249)
Q Consensus 49 ~~~~~~kvGd~ClA~ys~Dg~wY~A~I~~i~~~~~~V~F~~Ygn~E~V~~~~lrpl~~l 107 (249)
.....++.||....+-..|..|+.++... -|..-.||.+.|.+++.+
T Consensus 41 ~~eLs~~~Gd~i~v~~~~~~~Ww~g~~~~------------~g~~G~~P~~yv~~~~~~ 87 (109)
T 2yt6_A 41 TEDLSFKKGERFQIINNTEGDWWEARSIA------------TGKSGYIPSNYVVPADSI 87 (109)
T ss_dssp TTSCCCCTTCEEEEEECSCTTCEEEEESS------------SCCEEEECTTTEEESSSC
T ss_pred CCccCCCCCCEEEEEEccCCCcEEEEECC------------CCCEEEechHHcEECCcc
Confidence 34567899999988876677798887531 134456777777777543
No 200
>2k9g_A SH3 domain-containing kinase-binding protein 1; CIN85, adaptor protein, downregulation, CBL, apoptosis, junction, cytoplasmic vesicle, cytoskeleton; NMR {Homo sapiens}
Probab=20.19 E-value=1.9e+02 Score=19.19 Aligned_cols=27 Identities=19% Similarity=0.524 Sum_probs=21.1
Q ss_pred CCCCCCCCCCeEEEEecC--CCCEEEEEE
Q 025684 49 DNQEKLAVGTKVQAVYSE--DGEWYDATI 75 (249)
Q Consensus 49 ~~~~~~kvGd~ClA~ys~--Dg~wY~A~I 75 (249)
.....++.||....+-.. |+.|+.+++
T Consensus 23 ~~eLs~~~Gd~i~v~~~~~~~~~W~~g~~ 51 (73)
T 2k9g_A 23 DDELTIKEGDIVTLINKDCIDVGWWEGEL 51 (73)
T ss_dssp TTBCCBCTTCEEEEEECCSSSTTEEEEEE
T ss_pred CCeeeECCCCEEEEEECCCCCCCEEEEEE
Confidence 345789999999988753 677999875
No 201
>1tuc_A Alpha-spectrin; capping protein, calcium-binding, duplication, repeat, SH3 domain, cytoskeleton; 2.02A {Gallus gallus} SCOP: b.34.2.1
Probab=20.14 E-value=1.3e+02 Score=19.61 Aligned_cols=24 Identities=13% Similarity=0.429 Sum_probs=19.9
Q ss_pred CCCCCCCCeEEEEecCCCCEEEEE
Q 025684 51 QEKLAVGTKVQAVYSEDGEWYDAT 74 (249)
Q Consensus 51 ~~~~kvGd~ClA~ys~Dg~wY~A~ 74 (249)
...++.||....+-..|+.|+.++
T Consensus 5 eLs~~~Gd~i~v~~~~~~~Ww~g~ 28 (63)
T 1tuc_A 5 EVTMKKGDILTLLNSTNKDWWKVE 28 (63)
T ss_dssp CCCBCTTCEEEEEECCSSSEEEEE
T ss_pred ccCCCCCCEEEEEEecCCCEEEEE
Confidence 357899999999887677899886
Done!