Query 025688
Match_columns 249
No_of_seqs 243 out of 1738
Neff 6.3
Searched_HMMs 13730
Date Mon Mar 25 15:27:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025688.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/025688hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1r6ta2 c.26.1.1 (A:82-467) Tr 100.0 3.3E-72 2.4E-76 524.2 14.6 231 14-244 1-235 (386)
2 d1j1ua_ c.26.1.1 (A:) Tyrosyl- 100.0 3.4E-35 2.5E-39 265.0 10.9 169 59-244 4-176 (306)
3 d2ts1a_ c.26.1.1 (A:) Tyrosyl- 100.0 1.3E-35 9.5E-40 269.7 8.1 159 59-218 5-179 (319)
4 d1h3fa1 c.26.1.1 (A:5-347) Tyr 100.0 1.1E-35 8.1E-40 272.0 6.2 173 59-244 8-196 (343)
5 d1i6la_ c.26.1.1 (A:) Tryptoph 100.0 7.3E-35 5.3E-39 264.6 9.5 141 87-244 3-150 (326)
6 d1n3la_ c.26.1.1 (A:) Tyrosyl- 100.0 2.4E-34 1.8E-38 262.2 11.9 170 60-244 9-188 (339)
7 d1jila_ c.26.1.1 (A:) Tyrosyl- 100.0 2.6E-34 1.9E-38 261.5 10.6 158 58-217 5-178 (323)
8 d1irxa2 c.26.1.1 (A:3-319) Cla 96.2 0.002 1.5E-07 52.8 4.8 49 75-124 9-61 (317)
9 d1li5a2 c.26.1.1 (A:1-315) Cys 95.2 0.021 1.5E-06 48.3 7.5 75 84-159 21-107 (315)
10 d1pfva2 c.26.1.1 (A:4-140,A:17 95.1 0.028 2E-06 47.8 8.0 76 84-160 2-89 (350)
11 d1j09a2 c.26.1.1 (A:1-305) Glu 93.3 0.043 3.1E-06 46.8 5.2 71 93-171 9-86 (305)
12 d1nzja_ c.26.1.1 (A:) Glutamyl 92.9 0.088 6.4E-06 44.3 6.6 70 93-171 10-79 (286)
13 d2d5ba2 c.26.1.1 (A:1-348) Met 92.6 0.11 7.8E-06 43.5 6.6 66 94-160 14-90 (348)
14 d1gtra2 c.26.1.1 (A:8-338) Glu 91.5 0.23 1.7E-05 42.6 7.7 83 80-171 12-96 (331)
15 d1rqga2 c.26.1.1 (A:1-138,A:17 89.4 0.63 4.6E-05 38.7 8.5 43 86-129 4-52 (361)
16 d1ilea3 c.26.1.1 (A:1-197,A:38 87.1 0.18 1.3E-05 44.0 3.4 64 59-129 19-87 (452)
17 d1ivsa4 c.26.1.1 (A:1-189,A:34 82.9 0.61 4.4E-05 40.1 4.9 46 83-129 33-83 (425)
18 d1h3na3 c.26.1.1 (A:1-225,A:41 78.6 0.81 5.9E-05 39.9 4.2 47 83-129 32-81 (494)
19 d1f7ua2 c.26.1.1 (A:136-483) A 75.9 1 7.6E-05 38.3 4.1 40 89-129 14-58 (348)
20 d1ffya3 c.26.1.1 (A:1-200,A:39 74.8 2 0.00015 37.5 5.8 46 83-129 47-97 (450)
21 d1lw7a1 c.26.1.3 (A:57-219) Tr 61.3 4.3 0.00031 28.8 4.3 38 83-127 1-38 (163)
22 d1iq0a2 c.26.1.1 (A:97-466) Ar 59.7 2.7 0.0002 35.8 3.3 39 89-128 13-56 (370)
23 d1kama_ c.26.1.3 (A:) Nicotina 49.4 8.4 0.00061 27.5 4.2 41 83-129 1-42 (189)
24 d1jhda2 c.26.1.5 (A:174-396) A 46.2 5.2 0.00038 31.1 2.7 39 71-111 5-43 (223)
25 d1coza_ c.26.1.2 (A:) CTP:glyc 40.6 15 0.0011 25.9 4.3 29 97-129 11-39 (126)
26 d1f9aa_ c.26.1.3 (A:) Nicotina 40.5 17 0.0013 25.7 4.7 49 87-142 3-53 (164)
27 d1od6a_ c.26.1.3 (A:) Phosphop 34.1 50 0.0037 22.6 6.5 37 88-131 4-41 (160)
28 d1ej2a_ c.26.1.3 (A:) Nicotina 33.2 39 0.0028 23.8 5.8 73 87-169 3-77 (167)
29 d1tfua_ c.26.1.3 (A:) Phosphop 29.2 26 0.0019 24.3 4.0 38 86-129 3-40 (157)
30 d1qjca_ c.26.1.3 (A:) Phosphop 26.9 34 0.0025 23.5 4.3 37 86-129 2-38 (157)
31 d2ebna_ c.1.8.5 (A:) Endo-beta 25.1 41 0.003 26.8 4.9 48 110-158 73-121 (285)
32 d1b74a1 c.78.2.1 (A:1-105) Glu 21.7 1.1E+02 0.008 21.0 6.1 51 106-156 12-62 (105)
33 d1o6ba_ c.26.1.3 (A:) Phosphop 20.5 1.2E+02 0.0089 20.6 6.6 52 86-145 3-54 (163)
No 1
>d1r6ta2 c.26.1.1 (A:82-467) Tryptophanyl-tRNA synthetase (TrpRS) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00 E-value=3.3e-72 Score=524.21 Aligned_cols=231 Identities=62% Similarity=1.154 Sum_probs=220.7
Q ss_pred CcccccCCccC--CCcccHHHHHHHhCCCCCCHHHHHHHHHhcCCChhHHHhhccccccCChhHHHHHHHcCCceEEEec
Q 025688 14 EQVVSPWEVSS--SGKIDYDKLIDKFGCQRLDQSLVDRVQRLTGRPPHVFLRRGVFFAHRDLNDILDAYEKGEKFYLYTG 91 (249)
Q Consensus 14 ~~~v~pw~v~~--~~~~dy~kl~~~fg~~~i~~~~~~r~~~~~~~~~~~l~~Rgi~~~~~d~~~ll~~~e~~k~~~iYtG 91 (249)
|+.||||+|++ ...|||+||+++|||++||+++++|+|++||+++|+|+|||+||+|||++.+++++++|+|+++|||
T Consensus 1 ~~~~~pw~v~~~~~~~~dy~kl~~~fg~~~~~~~~~~~~~~~~~~~~h~~~rRg~~f~hrd~~~il~~~~~gkp~~vytG 80 (386)
T d1r6ta2 1 EDFVDPWTVQTSSAKGIDYDKLIVRFGSSKIDKELINRIERATGQRPHHFLRRGIFFSHRDMNQVLDAYENKKPFYLYTG 80 (386)
T ss_dssp CCEESSSCEECSCTTCCCHHHHHHHHTCEECCHHHHHHHHHHHCSCCCHHHHTTSEEEEESHHHHHHHHHTTCCEEEEEE
T ss_pred CCccCcccccCCCcccccHHHHHHHhCCCcCCHHHHHHHHHhccCCcchhhhcceeeeccCHHHHHHHHHcCCCeEEEec
Confidence 68999999977 3469999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCccchhhHHHHhHHHHHHcCCCcEEEEecChhhhhccCCCHHHHHHHHHHHHHHHHHcCCCCCceEEEEcCcCC
Q 025688 92 RGPSSEALHLGHLVPFMFTKYLQDAFKVPLVIQLTDDEKCMWKNLSVEESQRLARENAKDIIACGFDVTKTFIFSDFDYV 171 (249)
Q Consensus 92 ~dPSg~sLHlGHlv~~~~l~~lQ~~g~~~v~i~IaD~~k~~~r~l~~e~i~~~~~eni~~iiA~G~dp~kt~i~~ns~~~ 171 (249)
|+|||++|||||++++++++|||++++++++|+|||+||++++.++.+++++++++|+++++|||+||+|++||+||+|+
T Consensus 81 ~~PSg~~lHlGh~v~~~~~~~~q~~~~~~v~i~iaD~~a~~~~~~~~~e~~~~~~e~~~~~lA~GlDp~kt~i~~~s~~~ 160 (386)
T d1r6ta2 81 RGPSSEAMHVGHLIPFIFTKWLQDVFNVPLVIQMTDDEKYLWKDLTLDQAYGDAVENAKDIIACGFDINKTFIFSDLDYM 160 (386)
T ss_dssp ECCCTTCCBGGGHHHHHHHHHHHHHHTCCEEEEECHHHHHHHSSCCHHHHHHHHHHHHHHHHTTCCCTTSEEEEEHHHHG
T ss_pred cCCCCchhHHHHHHHHHHHHHHHHhcccceEEEecchHhhhcccCCHHHHHHHHHHHHHHHHHhCCCccceEEEeCcHHH
Confidence 99999889999999999999999999999999999999998888999999999999999999999999999999999997
Q ss_pred C--cccHHHHHHHhccCCHHHHHHhhCCCCCCceeeeechHHhhhccCCcCCCcccCCCCCCCCcccccCCCCCC
Q 025688 172 G--GAFYKNMVKVAKCVTYNKVVGIFGFTGEDHIGKVSFPPVQAVPSFPSSFPHLFSGKDHLRCLIPCAIDQVGS 244 (249)
Q Consensus 172 ~--~~~~~~~l~l~k~~tv~~m~~~~gf~~~~~ig~~~YP~lQaaDil~~~fp~~~~~~~~~~~lVPvg~DQdp~ 244 (249)
. .++|.+++++++++|++++++++|+++++|+|+++||+|||||||+.++|++|+.+.+.+|+||||+||+||
T Consensus 161 ~~l~~~~~~~~~l~r~~t~~~~k~~~~~~~~~~~g~~~YP~lQaaDil~~~~d~~~~~~~~~~~lvpvG~DQ~~h 235 (386)
T d1r6ta2 161 GMSSGFYKNVVKIQKHVTFNQVKGIFGFTDSDCIGKISFPAIQAAPSFSNSFPQIFRDRTDIQCLIPCAIDQDPY 235 (386)
T ss_dssp GGCTTHHHHHHHHHHTCBHHHHHHHHCCCTTSBHHHHHHHHHHHGGGSGGGCHHHHTTCCCCEEEEEEEGGGHHH
T ss_pred HHHHHHHHHHHHHHHhcchhHHHHhhccccCCcCcccccHHHHHHHHHHhcChhhhccccccccccccchhHHHH
Confidence 5 367899999999999999999999999999999999999999999999999998887899999999999943
No 2
>d1j1ua_ c.26.1.1 (A:) Tyrosyl-tRNA synthetase (TyrRS) {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=100.00 E-value=3.4e-35 Score=264.99 Aligned_cols=169 Identities=16% Similarity=0.200 Sum_probs=143.2
Q ss_pred hHHHhhccccccCChhHHHHHHHcCCceEEEeccCCCCCCccchhhHHHHhHHHHHHcCCCcEEEEecChhhhhccCCCH
Q 025688 59 HVFLRRGVFFAHRDLNDILDAYEKGEKFYLYTGRGPSSEALHLGHLVPFMFTKYLQDAFKVPLVIQLTDDEKCMWKNLSV 138 (249)
Q Consensus 59 ~~l~~Rgi~~~~~d~~~ll~~~e~~k~~~iYtG~dPSg~sLHlGHlv~~~~l~~lQ~~g~~~v~i~IaD~~k~~~r~l~~ 138 (249)
-.|++||+.. +.+.+++.+.++ +++.++|||++||| .|||||+++++.++|||++| +.++++|||+|+++.++.+.
T Consensus 4 ~~l~~r~~~e-~~~~~el~~~l~-~~~~~~y~G~~PTG-~lHlGh~v~~~~~~~lq~~g-~~~~~~IaD~~a~~~~~~~~ 79 (306)
T d1j1ua_ 4 FEMIKRNTSE-IISEEELREVLK-KDEKSAYIGFEPSG-KIHLGHYLQIKKMIDLQNAG-FDIIILLADLHAYLNQKGEL 79 (306)
T ss_dssp HHHHHTTCSE-EETHHHHHHHHH-SSSEEEEEEECCCS-SCBHHHHHHHHHHHHHHHTT-EEEEEEECHHHHHHTTCCCH
T ss_pred HHHHHhCcce-eCCHHHHHHHHh-cCCCeEEEeECCCC-cchHHHHHHHHHHHHHHHCC-CcEEEEeccHHHHhhhccch
Confidence 3678999853 445667777777 45679999999999 69999999999999999997 68999999999988877899
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCceEEEEcCcCCCcccHHHHHHHhccCCHHHHHHhhCC----CCCCceeeeechHHhhh
Q 025688 139 EESQRLARENAKDIIACGFDVTKTFIFSDFDYVGGAFYKNMVKVAKCVTYNKVVGIFGF----TGEDHIGKVSFPPVQAV 214 (249)
Q Consensus 139 e~i~~~~~eni~~iiA~G~dp~kt~i~~ns~~~~~~~~~~~l~l~k~~tv~~m~~~~gf----~~~~~ig~~~YP~lQaa 214 (249)
+++++++.++++.++|+|+||+ .++.++.|....++..++++++.+++++|.+...+ .++.++|+|+||+||||
T Consensus 80 ~~~~~~~~~~~~~~~a~G~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~r~~~~~~~~~~~YP~lQaa 157 (306)
T d1j1ua_ 80 DEIRKIGDYNKKVFEAMGLKAK--YVYGSEFQLDKDYTLNVYRLALKTTLKRARRSMELIAREDENPKVAEVIYPIMQVN 157 (306)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCE--EEEGGGTTTSHHHHHHHHHHHHHSCHHHHHHHTTTTSCCCSSCCTHHHHHHHHHHH
T ss_pred hhhhhhhhHHHHHHHhhhcccc--ccccchhhhhhhHHHhhhhhhhhhhhhhhhhhhhhhhhhhhccccccccccchhhc
Confidence 9999999999999999999984 33444455556777888899999999999998765 45688999999999999
Q ss_pred ccCCcCCCcccCCCCCCCCcccccCCCCCC
Q 025688 215 PSFPSSFPHLFSGKDHLRCLIPCAIDQVGS 244 (249)
Q Consensus 215 Dil~~~fp~~~~~~~~~~~lVPvg~DQdp~ 244 (249)
||+. + .+++||+|.||.+|
T Consensus 158 Dil~------~-----~~~~~~~G~DQ~~~ 176 (306)
T d1j1ua_ 158 DIHY------L-----GVDVAVGGMEQRKI 176 (306)
T ss_dssp HHHH------H-----TCSEEEEEGGGHHH
T ss_pred chhh------c-----CcceeccchhhHHH
Confidence 9996 3 68999999999853
No 3
>d2ts1a_ c.26.1.1 (A:) Tyrosyl-tRNA synthetase (TyrRS) {Bacillus stearothermophilus, nca 1503 [TaxId: 1422]}
Probab=100.00 E-value=1.3e-35 Score=269.66 Aligned_cols=159 Identities=19% Similarity=0.257 Sum_probs=136.6
Q ss_pred hHHHhhccccccCChhHHHHHHHcCCceEEEeccCCCCCCccchhhHHHHhHHHHHHcCCCcEEEE------ecChh-hh
Q 025688 59 HVFLRRGVFFAHRDLNDILDAYEKGEKFYLYTGRGPSSEALHLGHLVPFMFTKYLQDAFKVPLVIQ------LTDDE-KC 131 (249)
Q Consensus 59 ~~l~~Rgi~~~~~d~~~ll~~~e~~k~~~iYtG~dPSg~sLHlGHlv~~~~l~~lQ~~g~~~v~i~------IaD~~-k~ 131 (249)
..|.+||+|+++++++.+.++++ ++++++|+||||||+||||||++++++++|||++||.+++|+ ||||+ +.
T Consensus 5 ~~l~~RGl~~~~t~~~~l~~~l~-~~~~~~Y~G~DPTa~sLHlGhlv~l~~l~~~q~~Gh~~i~LiG~~T~~IGDPsgk~ 83 (319)
T d2ts1a_ 5 AELQWRGLVNQTTDEDGLRKLLN-EERVTLYCGFDPTADSLHIGHLATILTMRRFQQAGHRPIALVGGATGLIGDPSGKK 83 (319)
T ss_dssp HHHHHHTCCSEESCHHHHHHHHH-HSCCEEEEEECCSSSSCBGGGHHHHHHHHHHHHTTCEEEEEECTTGGGTCCCTTCS
T ss_pred HHHHHCCCeeeeCCHHHHHHHHh-CCCceEEEeecCCCCcchHHHHHHHHHHHHHHHcCCceeEEeeehhhccCCCcccc
Confidence 46789999999999998877666 689999999999999999999999999999999999988888 99999 55
Q ss_pred hccC-CCHHHHHHHHH---HHHHHHHHcCCCCCceEEEEcCcCCCcccHHHHHH-HhccCCHHHHHHhhCC----CCCCc
Q 025688 132 MWKN-LSVEESQRLAR---ENAKDIIACGFDVTKTFIFSDFDYVGGAFYKNMVK-VAKCVTYNKVVGIFGF----TGEDH 202 (249)
Q Consensus 132 ~~r~-l~~e~i~~~~~---eni~~iiA~G~dp~kt~i~~ns~~~~~~~~~~~l~-l~k~~tv~~m~~~~gf----~~~~~ 202 (249)
..|+ ++.|++++++. ++++.+++.+.+++++.|++|++|+++..+..+++ +|+++|+++|+++..+ ...++
T Consensus 84 ~eR~~l~~e~i~~n~~~~~~q~~~~~~~~~~~~~~~iv~N~~w~~~~~~~~~l~~~g~~~tv~~ml~rd~v~~R~~~~is 163 (319)
T d2ts1a_ 84 SERTLNAKETVEAWSARIKEQLGRFLDFEADGNPAKIKNNYDWIGPLDVITFLRDVGKHFSVNYMMAKESVQSRIETGIS 163 (319)
T ss_dssp SCCCCCCHHHHHHHHHHHHHHHTTSSCSSCSSSCCEEEETHHHHTTCCHHHHHHHTGGGCCHHHHHTSHHHHTTTTTCCC
T ss_pred hhhhcCCHHHHHHHHHHHHHHHHHhhcccccccccceeehHHHHhhHHHHHHHHHHccccchhhhhhhHHHHHhcccCcc
Confidence 5565 89999996653 33333445566788999999999998888989997 9999999999998654 34688
Q ss_pred eeeeechHHhhhccCC
Q 025688 203 IGKVSFPPVQAVPSFP 218 (249)
Q Consensus 203 ig~~~YP~lQaaDil~ 218 (249)
+++|+||++||+|++.
T Consensus 164 ~~Ef~Y~llQayDf~~ 179 (319)
T d2ts1a_ 164 FTEFSYMMLQAYDFLR 179 (319)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred hhhhHHHHHHHHHHHH
Confidence 9999999999999884
No 4
>d1h3fa1 c.26.1.1 (A:5-347) Tyrosyl-tRNA synthetase (TyrRS) {Thermus thermophilus [TaxId: 274]}
Probab=100.00 E-value=1.1e-35 Score=272.01 Aligned_cols=173 Identities=18% Similarity=0.165 Sum_probs=132.8
Q ss_pred hHHHhhccccccCChhHHHHHHHcCCceEEEeccCCCCCCccchhhHHHHhHHHHHHcCCCcEEEEecChhhhhccCCC-
Q 025688 59 HVFLRRGVFFAHRDLNDILDAYEKGEKFYLYTGRGPSSEALHLGHLVPFMFTKYLQDAFKVPLVIQLTDDEKCMWKNLS- 137 (249)
Q Consensus 59 ~~l~~Rgi~~~~~d~~~ll~~~e~~k~~~iYtG~dPSg~sLHlGHlv~~~~l~~lQ~~g~~~v~i~IaD~~k~~~r~l~- 137 (249)
..|++||+.... ..+++++.+++|+++++|+||+|||++||||||+++++++|||++| ..++++|||+|+++.++..
T Consensus 8 ~~l~~R~~~e~~-~~eel~~~l~~g~~~~vY~G~~PTg~sLHlGh~v~~~~~~~lq~~g-~~~~~~iad~~a~~~d~~~~ 85 (343)
T d1h3fa1 8 LALLKRGAEEIV-PEEELLAKLKEGRPLTVKLGADPTRPDLHLGHAVVLRKMRQFQELG-HKVVLIIGDFTGMIGDPSGR 85 (343)
T ss_dssp HHHHHTTCSEEE-THHHHHHHHHTCSCCEEEEEECTTCCSCBHHHHHHHHHHHHHHHTT-CEEEEEECCCC---------
T ss_pred HHHHHcCchhcC-CHHHHHHHHhcCCCCEEEEeecCCCCcccHHHHHHHHHHHHHHHCC-CceEEEEechhhhhhcccch
Confidence 468999986544 3478899999999999999999999899999999999999999998 5789999999987754311
Q ss_pred -H---HHHHHHHHHHHHHHHHc-----CCCCCceEEEEcCcCCCcccHHHHHHHhccCCHHHHHHhhC------CCCCCc
Q 025688 138 -V---EESQRLARENAKDIIAC-----GFDVTKTFIFSDFDYVGGAFYKNMVKVAKCVTYNKVVGIFG------FTGEDH 202 (249)
Q Consensus 138 -~---e~i~~~~~eni~~iiA~-----G~dp~kt~i~~ns~~~~~~~~~~~l~l~k~~tv~~m~~~~g------f~~~~~ 202 (249)
. ....+...+|++.++++ +.++..+.|++|++|.....+..+++.++++++++|.++.. ...+.+
T Consensus 86 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (343)
T d1h3fa1 86 SKTRPPLTLEETRENAKTYVAQAGKILRQEPHLFELRYNSEWLEGLTFKEVVRLTSLMTVAQMLEREDFKKRYEAGIPIS 165 (343)
T ss_dssp ------------HHHHHHHHHHHTTTSCCCTTTEEEEETHHHHTTCBHHHHHHHHTTSBHHHHTTSHHHHHHHHTTCCCB
T ss_pred hhhhhhhhHHHHHHHHHHHHHHHhhhhcccccchhheechHHHhhhhHHHHHHhcccceecchhhhhhhhhccccccccc
Confidence 0 01112223566555552 44567899999999988888999999999999999977643 344678
Q ss_pred eeeeechHHhhhccCCcCCCcccCCCCCCCCcccccCCCCCC
Q 025688 203 IGKVSFPPVQAVPSFPSSFPHLFSGKDHLRCLIPCAIDQVGS 244 (249)
Q Consensus 203 ig~~~YP~lQaaDil~~~fp~~~~~~~~~~~lVPvg~DQdp~ 244 (249)
+|+|+||+||||||+. + .+|+||||+||+||
T Consensus 166 ~~~f~YP~lQaaDi~~------l-----~~~~vp~G~DQ~~~ 196 (343)
T d1h3fa1 166 LHELLYPFAQAYDSVA------I-----RADVEMGGTDQRFN 196 (343)
T ss_dssp GGGGTHHHHHHHHHHH------H-----TCSEEEEEGGGHHH
T ss_pred chhhhhHHHHhhhhhh------h-----cccccccccchHHH
Confidence 9999999999999996 3 58999999999943
No 5
>d1i6la_ c.26.1.1 (A:) Tryptophanyl-tRNA synthetase (TrpRS) {Bacillus stearothermophilus [TaxId: 1422]}
Probab=100.00 E-value=7.3e-35 Score=264.58 Aligned_cols=141 Identities=17% Similarity=0.180 Sum_probs=123.7
Q ss_pred EEEeccCCCCCCccchhhHHHHh-HHHHHHcCCCcEEEEecChhhhhccCCCHHHHHHHHHHHHHHHHHcCCCCCceEEE
Q 025688 87 YLYTGRGPSSEALHLGHLVPFMF-TKYLQDAFKVPLVIQLTDDEKCMWKNLSVEESQRLARENAKDIIACGFDVTKTFIF 165 (249)
Q Consensus 87 ~iYtG~dPSg~sLHlGHlv~~~~-l~~lQ~~g~~~v~i~IaD~~k~~~r~l~~e~i~~~~~eni~~iiA~G~dp~kt~i~ 165 (249)
++|||++||| .|||||+++++. +.+||+ + +.++|+|||+|+++.+ .+.+++++++++++++++|||+||++++||
T Consensus 3 ~v~tG~~PSG-~~HlG~~~g~i~~~~~lq~-~-~~~~i~iAD~halt~~-~~~~~l~~~~~~~~~~~lA~G~dp~k~~i~ 78 (326)
T d1i6la_ 3 TIFSGIQPSG-VITIGNYIGALRQFVELQH-E-YNCYFCIVDQHAITVW-QDPHELRQNIRRLAALYLAVGIDPTQATLF 78 (326)
T ss_dssp EEEEEECCCS-CCBHHHHHHTHHHHHHHTT-T-SEEEEEECHHHHTTSC-CCHHHHHHHHHHHHHHHHHTTCCTTTSEEE
T ss_pred eeEeCcCCCC-ccHHHHHHHHHHHHHHHhC-C-CCEEEEeehHHhhccC-CCHHHHHHHHHHHHHHhhhhhccccceEEE
Confidence 7899999999 899999998764 445776 3 6899999999998865 688999999999999999999999999999
Q ss_pred EcCcCCCcccHHHHHHHhccCCHHHHHHhh------CCCCCCceeeeechHHhhhccCCcCCCcccCCCCCCCCcccccC
Q 025688 166 SDFDYVGGAFYKNMVKVAKCVTYNKVVGIF------GFTGEDHIGKVSFPPVQAVPSFPSSFPHLFSGKDHLRCLIPCAI 239 (249)
Q Consensus 166 ~ns~~~~~~~~~~~l~l~k~~tv~~m~~~~------gf~~~~~ig~~~YP~lQaaDil~~~fp~~~~~~~~~~~lVPvg~ 239 (249)
.||++. .+.++.+.++..++++++.++. ++.++.|+|+++||+|||||||+ + ++++||||+
T Consensus 79 ~qS~~~--~~~el~~~l~~~~~~~~l~r~~~~k~~~~~~~~~~~g~l~YP~lQaADIl~------~-----~~d~vpvG~ 145 (326)
T d1i6la_ 79 IQSEVP--AHAQAAWMLQCIVYIGELERMTQFKEKSAGKEAVSAGLLTYPPLMAADILL------Y-----NTDIVPVGE 145 (326)
T ss_dssp EGGGCT--HHHHHHHHHHTTSCHHHHHTCHHHHHHHTTCSSCCHHHHTHHHHHHHHHHT------T-----TCSEEECCG
T ss_pred eecccc--hHHHHHHHHHhhhhhhhhhhcccchhhccccccCCccccccccccchhHHh------c-----Ccccccccc
Confidence 999974 5778888899999998887664 45567899999999999999997 3 689999999
Q ss_pred CCCCC
Q 025688 240 DQVGS 244 (249)
Q Consensus 240 DQdp~ 244 (249)
||+||
T Consensus 146 DQ~~h 150 (326)
T d1i6la_ 146 DQKQH 150 (326)
T ss_dssp GGHHH
T ss_pred chHHH
Confidence 99965
No 6
>d1n3la_ c.26.1.1 (A:) Tyrosyl-tRNA synthetase (TyrRS) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00 E-value=2.4e-34 Score=262.24 Aligned_cols=170 Identities=13% Similarity=0.076 Sum_probs=138.0
Q ss_pred HHHhhccccccCChhHHHHHHHcCCceEEEeccCCCCCCccchhhHHHHhHHHHHHcCCCcEEEEecChhhhhccC-CCH
Q 025688 60 VFLRRGVFFAHRDLNDILDAYEKGEKFYLYTGRGPSSEALHLGHLVPFMFTKYLQDAFKVPLVIQLTDDEKCMWKN-LSV 138 (249)
Q Consensus 60 ~l~~Rgi~~~~~d~~~ll~~~e~~k~~~iYtG~dPSg~sLHlGHlv~~~~l~~lQ~~g~~~v~i~IaD~~k~~~r~-l~~ 138 (249)
+|++||+.... ..+++.+.++ ++++++|+||+||| .|||||++++++++++|++| ..++++|||+|+++.++ .+.
T Consensus 9 ~li~r~~~ei~-~~~eL~~~l~-~~~~~vy~G~~PTg-~lHlG~~l~~~~l~~~q~~g-~~~~~~IaD~~a~~~~~~~~~ 84 (339)
T d1n3la_ 9 HLITRNLQEVL-GEEKLKEILK-ERELKIYWGTATTG-KPHVAYFVPMSKIADFLKAG-CEVTILFADLHAYLDNMKAPW 84 (339)
T ss_dssp HHHHTTCSEEE-CHHHHHHHHT-TSCCEEEEEECCSS-CCBGGGHHHHHHHHHHHHTT-CEEEEEECHHHHHHTTTTSCH
T ss_pred HHHHcCCceeC-CHHHHHHHHc-cCCCEEEEeeCCCC-ccHHHHHHHHHHHHHHHHCC-CcEEEEecchhhhccCCCCch
Confidence 78899986544 4677777775 68899999999999 69999999999999999987 68999999999987654 344
Q ss_pred HHHHHHH---HHHH-HHHHHcCCCCCceEEEEcCcCCCc-ccHHHHHHHhccCCHHHHHHhh----CCCCCCceeeeech
Q 025688 139 EESQRLA---RENA-KDIIACGFDVTKTFIFSDFDYVGG-AFYKNMVKVAKCVTYNKVVGIF----GFTGEDHIGKVSFP 209 (249)
Q Consensus 139 e~i~~~~---~eni-~~iiA~G~dp~kt~i~~ns~~~~~-~~~~~~l~l~k~~tv~~m~~~~----gf~~~~~ig~~~YP 209 (249)
+..+..+ .+++ +.+.|+|+||+++.|++||+|..+ .++..++++++.++++++...+ +..++.++|+|+||
T Consensus 85 ~~~~~~~~~~~~~~~~~~~a~g~d~~k~~i~~~sd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~f~YP 164 (339)
T d1n3la_ 85 ELLELRVSYYENVIKAMLESIGVPLEKLKFIKGTDYQLSKEYTLDVYRLSSVVTQHDSKKAGAEVVKQVEHPLLSGLLYP 164 (339)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCCCTTEEEEEGGGTTTSHHHHHHHHHHHTTSCHHHHHHHTTTTSCCCSSCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhccChHHheeeecChHhhhhhHHHHHhhHHHHHHHHHHHHHHHHHhccCCCCcccccccc
Confidence 3333222 2333 456699999999999999999653 5667778899999999887764 34567889999999
Q ss_pred HHhhhccCCcCCCcccCCCCCCCCcccccCCCCCC
Q 025688 210 PVQAVPSFPSSFPHLFSGKDHLRCLIPCAIDQVGS 244 (249)
Q Consensus 210 ~lQaaDil~~~fp~~~~~~~~~~~lVPvg~DQdp~ 244 (249)
+|||||||. | .+++||||.||+||
T Consensus 165 ~lQaaDil~--~---------~ad~v~~G~DQ~~~ 188 (339)
T d1n3la_ 165 GLQALDEEY--L---------KVDAQFGGIDQRKI 188 (339)
T ss_dssp HHHHHHHHH--T---------TCSEEEEEGGGHHH
T ss_pred HHHHHHHHh--c---------cCCccccchhHHHH
Confidence 999999997 3 68999999999964
No 7
>d1jila_ c.26.1.1 (A:) Tyrosyl-tRNA synthetase (TyrRS) {Staphylococcus aureus [TaxId: 1280]}
Probab=100.00 E-value=2.6e-34 Score=261.54 Aligned_cols=158 Identities=20% Similarity=0.321 Sum_probs=132.4
Q ss_pred hhHHHhhccccccCChhHHHHHHHcCCceEEEeccCCCCCCccchhhHHHHhHHHHHHcCCCcEEEE------ecChh-h
Q 025688 58 PHVFLRRGVFFAHRDLNDILDAYEKGEKFYLYTGRGPSSEALHLGHLVPFMFTKYLQDAFKVPLVIQ------LTDDE-K 130 (249)
Q Consensus 58 ~~~l~~Rgi~~~~~d~~~ll~~~e~~k~~~iYtG~dPSg~sLHlGHlv~~~~l~~lQ~~g~~~v~i~------IaD~~-k 130 (249)
+..|.+||+|++|++++.+.++++ ++++++|+||||||+||||||++++++++|||++||.+++++ ||||+ +
T Consensus 5 ~~~l~~Rgli~~~t~~~~l~~ll~-~~~~~~Y~G~DPTa~sLHlGhlv~l~~l~~~q~~Gh~~i~LiG~~T~~iGDPsgk 83 (323)
T d1jila_ 5 IEDLKWRGLIYQQTDEQGIEDLLN-KEQVTLYCGADPTADSLHIGHLLPFLTLRRFQEHGHRPIVLIGGGTGMIGDPSGK 83 (323)
T ss_dssp HHHHHHTTCCCCBSCHHHHHHHHH-HSCCEEEEEECCSSSSCBHHHHHHHHHHHHHHHTTCEEEEEECTTGGGTCCCTTC
T ss_pred HHHHHHCCCeeecCCHHHHHHHHh-CCCcEEEEcccCCCccccHHHHHHHHHHHHHHHhCCceEEeehhhhhhccCCCcc
Confidence 357899999999999988766555 789999999999999999999999999999999999888887 99999 5
Q ss_pred hhccC-CCHHHHHHHHHHHHHHHHH--cCC-CCCceEEEEcCcCCCcccHHHHHH-HhccCCHHHHHHhhCC----CCCC
Q 025688 131 CMWKN-LSVEESQRLARENAKDIIA--CGF-DVTKTFIFSDFDYVGGAFYKNMVK-VAKCVTYNKVVGIFGF----TGED 201 (249)
Q Consensus 131 ~~~r~-l~~e~i~~~~~eni~~iiA--~G~-dp~kt~i~~ns~~~~~~~~~~~l~-l~k~~tv~~m~~~~gf----~~~~ 201 (249)
...|+ ++.+++++++. +++..+. ..+ ++.++.|++|++|+++..+..+++ +|+++|+++|+++..+ +..+
T Consensus 84 ~~~R~~l~~~~i~~n~~-~~~~~~~~~~~~~~~~~~~i~~n~~w~~~~~~~~~l~~~~~~~~v~~ml~~d~~~~R~~~~i 162 (323)
T d1jila_ 84 SEERVLQTEEQVDKNIE-GISKQMHNIFEFGTDHGAVLVNNRDWLGQISLISFLRDYGKHVGVNYMLGKDSIQSRLEHGI 162 (323)
T ss_dssp SSCCCCCCHHHHHHHHH-HHHHHHHHHSCCSSSSSCEEEETHHHHTTCCHHHHHHHTGGGCCHHHHHTCGGGHHHHTTTC
T ss_pred chhhhhhhHHHHHHHHh-hhhhhhhhhhhcccccceEEechhhhhccchHHHHHHHHhhhhhhhHHHHhHHHHHHhcccc
Confidence 54455 89999997663 2222222 122 357899999999999899999997 9999999999998766 3468
Q ss_pred ceeeeechHHhhhccC
Q 025688 202 HIGKVSFPPVQAVPSF 217 (249)
Q Consensus 202 ~ig~~~YP~lQaaDil 217 (249)
++++|+||+|||+|++
T Consensus 163 s~~Ef~YpllQ~~Df~ 178 (323)
T d1jila_ 163 SYTEFTYTILQAIDFG 178 (323)
T ss_dssp CHHHHHHHHHHHHHHH
T ss_pred cHhhHHHHHHHHHHHH
Confidence 8999999999999986
No 8
>d1irxa2 c.26.1.1 (A:3-319) Class I lysyl-tRNA synthetase {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=96.23 E-value=0.002 Score=52.83 Aligned_cols=49 Identities=22% Similarity=0.290 Sum_probs=34.1
Q ss_pred HHHHHHHcCCceEEEeccCCCCCCccchhhHHHHh----HHHHHHcCCCcEEEE
Q 025688 75 DILDAYEKGEKFYLYTGRGPSSEALHLGHLVPFMF----TKYLQDAFKVPLVIQ 124 (249)
Q Consensus 75 ~ll~~~e~~k~~~iYtG~dPSg~sLHlGHlv~~~~----l~~lQ~~g~~~v~i~ 124 (249)
++++....++++.+-||.=||| .|||||+-+.+. .|+|...|+...++.
T Consensus 9 ~~~~~~~~k~~~v~~~~~~PnG-~lHIGHlr~~i~gD~laR~lr~~G~~V~~~~ 61 (317)
T d1irxa2 9 KIIRERGEKEKYVVESGITPSG-YVHVGNFRELFTAYIVGHALRDKGYEVRHIH 61 (317)
T ss_dssp HHHHHSCCCSEEEEEEEECCSS-CCCHHHHHHHHHHHHHHHHHHTTTCEEEEEE
T ss_pred HHHHhcCCCCeEEEECCCCCCC-CccccccHHHHHHHHHHHHHHHcCCCEEEEE
Confidence 4444444467788889999999 899999877653 455666675444444
No 9
>d1li5a2 c.26.1.1 (A:1-315) Cysteinyl-tRNA synthetase (CysRS) {Escherichia coli [TaxId: 562]}
Probab=95.23 E-value=0.021 Score=48.34 Aligned_cols=75 Identities=21% Similarity=0.148 Sum_probs=46.5
Q ss_pred CceEEE-eccCCCCCCccchhhHHHHh----HHHHHHcCCCcEEEEecChh--hhh---cc-CCCHHH-HHHHHHHHHHH
Q 025688 84 EKFYLY-TGRGPSSEALHLGHLVPFMF----TKYLQDAFKVPLVIQLTDDE--KCM---WK-NLSVEE-SQRLARENAKD 151 (249)
Q Consensus 84 k~~~iY-tG~dPSg~sLHlGHlv~~~~----l~~lQ~~g~~~v~i~IaD~~--k~~---~r-~l~~e~-i~~~~~eni~~ 151 (249)
+++.+| ||.-|+| ++||||+-+.+. .|++...|+...++.-.|.| +.. +. ..+.++ +.++..+..++
T Consensus 21 ~~~~~yv~Gptv~g-~~HIGH~R~av~gD~laR~lr~~G~~V~~~~~~dd~G~~i~~~a~~~~~~~~e~~~~~~~~~~~~ 99 (315)
T d1li5a2 21 GEVGMYVCGITVYD-LCHIGHGRTFVAFDVVARYLRFLGYKLKYVRNITDIDDKIIKRANENGESFVAMVDRMIAEMHKD 99 (315)
T ss_dssp TEEEEEECCCBSSS-CCBHHHHHHHHHHHHHHHHHHHHTCEEEEEECBBCCSHHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred CeEEEEecCCcCCC-CcccchhHHHHHHHHHHHHHHHcCCcEEEEecccchhHHHHHHHhhhhhccccccccchhhhhhh
Confidence 345555 5888888 999999876653 45566677655555667776 221 11 245544 44444566777
Q ss_pred HHHcCCCC
Q 025688 152 IIACGFDV 159 (249)
Q Consensus 152 iiA~G~dp 159 (249)
+.+.++.+
T Consensus 100 ~~~~~i~~ 107 (315)
T d1li5a2 100 FDALNILR 107 (315)
T ss_dssp HHHTTCCC
T ss_pred HHhcCCCC
Confidence 77777754
No 10
>d1pfva2 c.26.1.1 (A:4-140,A:176-388) Methionyl-tRNA synthetase (MetRS) {Escherichia coli [TaxId: 562]}
Probab=95.13 E-value=0.028 Score=47.78 Aligned_cols=76 Identities=16% Similarity=0.238 Sum_probs=45.6
Q ss_pred CceEEEecc-CCCCCCccchhhHHHH---h-HHHHHHcCCCcEEEEecChh--hhhc----cCCCHHHHHH-HHHHHHHH
Q 025688 84 EKFYLYTGR-GPSSEALHLGHLVPFM---F-TKYLQDAFKVPLVIQLTDDE--KCMW----KNLSVEESQR-LARENAKD 151 (249)
Q Consensus 84 k~~~iYtG~-dPSg~sLHlGHlv~~~---~-l~~lQ~~g~~~v~i~IaD~~--k~~~----r~l~~e~i~~-~~~eni~~ 151 (249)
|++.|-|+. -||| .|||||+.+.+ . .|++...|....++.=.|++ +... ...+.+++.+ +..+..++
T Consensus 2 ~~~~i~~~~P~~nG-~lHiGHar~~v~~D~l~R~lr~~G~~V~~v~~~dd~g~ki~~~a~~~g~~~~~~~~~~~~~~~~~ 80 (350)
T d1pfva2 2 KKILVTCALPYANG-SIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQLGITPEQMIGEMSQEHQTD 80 (350)
T ss_dssp CEEEEEECCCBTTS-CCBHHHHHHHHHHHHHHHHHHHTTCEEEEEEEEBCCSHHHHHHHHHHTSCHHHHHHHHHHHHHHH
T ss_pred CeEEEeCCCCCCCC-CccccccHHHHHHHHHHHHHHhcCCceEecCccCCccHHHHHHHHHcCCCHHHHHHhHHHHHHHH
Confidence 567788887 6778 89999977654 2 34555566444444444554 2221 2256655443 34455566
Q ss_pred HHHcCCCCC
Q 025688 152 IIACGFDVT 160 (249)
Q Consensus 152 iiA~G~dp~ 160 (249)
+.+++++..
T Consensus 81 ~~~l~i~~~ 89 (350)
T d1pfva2 81 FAGFNISYD 89 (350)
T ss_dssp HHHTTCCCS
T ss_pred HHHcCCCcc
Confidence 777887654
No 11
>d1j09a2 c.26.1.1 (A:1-305) Glutamyl-tRNA synthetase (GluRS) {Thermus thermophilus [TaxId: 274]}
Probab=93.30 E-value=0.043 Score=46.78 Aligned_cols=71 Identities=8% Similarity=0.140 Sum_probs=43.2
Q ss_pred CCCCCCccchhhHHHHhHHHHHHcCCCcEEEEecChhhhhccCCCHHHHHHHHHHHHHHHHHcCCCCCc-------eEEE
Q 025688 93 GPSSEALHLGHLVPFMFTKYLQDAFKVPLVIQLTDDEKCMWKNLSVEESQRLARENAKDIIACGFDVTK-------TFIF 165 (249)
Q Consensus 93 dPSg~sLHlGHlv~~~~l~~lQ~~g~~~v~i~IaD~~k~~~r~l~~e~i~~~~~eni~~iiA~G~dp~k-------t~i~ 165 (249)
.||| .|||||+..++..--+.+..+..+++-|-|.-.. | -..+ +.....+++..+|++++. ..++
T Consensus 9 sPtG-~lHiG~~rtal~n~~~Ak~~~G~~iLRidDtD~~--R-~~~~----~~~~I~~dL~wLgi~wD~~p~~~~~~~~~ 80 (305)
T d1j09a2 9 SPTG-DPHVGTAYIALFNYAWARRNGGRFIVRIEDTDRA--R-YVPG----AEERILAALKWLGLSYDEGPDVGGPHGPY 80 (305)
T ss_dssp CCSS-SCBHHHHHHHHHHHHHHHHTTCEEEECBCCCCTT--S-CCTT----HHHHHHHHHHHTTCCCSBBTTTBCTTCCC
T ss_pred CCCC-cccHHHHHHHHHHHHHHHHcCCEEEEEeCcCCCc--c-CchH----HHHHHHHHHHHHhcCcccCCcCCCCCcce
Confidence 4898 9999999998864334444445666667664321 1 1111 122445667778998653 2467
Q ss_pred EcCcCC
Q 025688 166 SDFDYV 171 (249)
Q Consensus 166 ~ns~~~ 171 (249)
.||+-+
T Consensus 81 ~qS~r~ 86 (305)
T d1j09a2 81 RQSERL 86 (305)
T ss_dssp BGGGCH
T ss_pred eeecch
Confidence 888864
No 12
>d1nzja_ c.26.1.1 (A:) Glutamyl-Q tRNA-Asp synthetase YadB {Escherichia coli [TaxId: 562]}
Probab=92.92 E-value=0.088 Score=44.34 Aligned_cols=70 Identities=14% Similarity=0.107 Sum_probs=42.4
Q ss_pred CCCCCCccchhhHHHHhHHHHHHcCCCcEEEEecChhhhhccCCCHHHHHHHHHHHHHHHHHcCCCCCceEEEEcCcCC
Q 025688 93 GPSSEALHLGHLVPFMFTKYLQDAFKVPLVIQLTDDEKCMWKNLSVEESQRLARENAKDIIACGFDVTKTFIFSDFDYV 171 (249)
Q Consensus 93 dPSg~sLHlGHlv~~~~l~~lQ~~g~~~v~i~IaD~~k~~~r~l~~e~i~~~~~eni~~iiA~G~dp~kt~i~~ns~~~ 171 (249)
.||| .|||||+..++..-.+.+..+..+++-|=|--.--.+. + +.....+++..+|++.+. .++.||+-.
T Consensus 10 sPtG-~lHiG~~rtal~n~~~Ak~~~G~~iLRieDtD~~R~~~---~----~~~~I~~dL~wlgl~~d~-~~~~QS~r~ 79 (286)
T d1nzja_ 10 SPSG-ELHFGSLIAALGSYLQARARQGRWLVRIEDIDPPREVP---G----AAETILRQLEHYGLHWDG-DVLWQSQRH 79 (286)
T ss_dssp CTTS-CCCHHHHHHHHHHHHHHHHTTCEEEEEECCSCGGGSCT---T----HHHHHHHHHHHTTCCCSS-CCEEGGGCH
T ss_pred CCCC-cccHHHHHHHHHHHHHHHHhCCEEEEEeCCCCCCcCCH---H----HHHHHHHHHHHhhhcccc-ccchhHHHH
Confidence 5898 99999999988743344444456777676643211111 1 222444566678998753 356788854
No 13
>d2d5ba2 c.26.1.1 (A:1-348) Methionyl-tRNA synthetase (MetRS) {Thermus thermophilus [TaxId: 274]}
Probab=92.57 E-value=0.11 Score=43.51 Aligned_cols=66 Identities=12% Similarity=0.055 Sum_probs=36.5
Q ss_pred CCCCCccchhhHHHH---hH-HHHHHcCCCcEEEEecChh--hh---hc-cCCCHHHHHHHH-HHHHHHHHHcCCCCC
Q 025688 94 PSSEALHLGHLVPFM---FT-KYLQDAFKVPLVIQLTDDE--KC---MW-KNLSVEESQRLA-RENAKDIIACGFDVT 160 (249)
Q Consensus 94 PSg~sLHlGHlv~~~---~l-~~lQ~~g~~~v~i~IaD~~--k~---~~-r~l~~e~i~~~~-~eni~~iiA~G~dp~ 160 (249)
||| .|||||+.+.+ .+ |+|..+|+...+|+-.|.+ +. .. ...+.+++.... .+....+-++|++++
T Consensus 14 pnG-~lHiGH~r~~v~~D~l~R~lr~~G~~V~~v~g~D~~g~~i~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~i~~~ 90 (348)
T d2d5ba2 14 VNA-EPHLGHAYTTVVADFLARWHRLDGYRTFFLTGTDEHGETVYRAAQAAGEDPKAFVDRVSGRFKRAWDLLGIAYD 90 (348)
T ss_dssp TTS-CCCHHHHHHHHHHHHHHHHHHHTTCEEEEEEEEECCSHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHTTCCCS
T ss_pred CCC-CcccccCHHHHHHHHHHHHHHhcCCCeEecCcCCCCCHHHHHHHHHcCCCHHHhhhhHHHHHHHHHHhcCcccc
Confidence 678 89999976554 23 4555667544455555554 21 11 225665544333 233344555788765
No 14
>d1gtra2 c.26.1.1 (A:8-338) Glutaminyl-tRNA synthetase (GlnRS) {Escherichia coli [TaxId: 562]}
Probab=91.54 E-value=0.23 Score=42.63 Aligned_cols=83 Identities=19% Similarity=0.263 Sum_probs=49.1
Q ss_pred HHcCCceEEEeccC--CCCCCccchhhHHHHhHHHHHHcCCCcEEEEecChhhhhccCCCHHHHHHHHHHHHHHHHHcCC
Q 025688 80 YEKGEKFYLYTGRG--PSSEALHLGHLVPFMFTKYLQDAFKVPLVIQLTDDEKCMWKNLSVEESQRLARENAKDIIACGF 157 (249)
Q Consensus 80 ~e~~k~~~iYtG~d--PSg~sLHlGHlv~~~~l~~lQ~~g~~~v~i~IaD~~k~~~r~l~~e~i~~~~~eni~~iiA~G~ 157 (249)
+++++.-.|-|=|- ||| .|||||+..+++.-.+.++.+..++|-|=|--.. | -..+-.. ..+.++.-+|+
T Consensus 12 l~~~~~~~v~tRFAPSPTG-~LHiG~~rtal~n~l~Ak~~~G~fiLRIEDtD~~--R-~~~~~~~----~I~~dL~WLGl 83 (331)
T d1gtra2 12 LASGKHTTVHTRFPPEPNG-YLHIGHAKSICLNFGIAQDYKGQCNLRFDDTNPV--K-EDIEYVE----SIKNDVEWLGF 83 (331)
T ss_dssp HHHTSCSSCEEEECCCSSS-CCBHHHHHHHHHHHHHHHHTTCEEEEEECCCCGG--G-CCHHHHH----HHHHHHHHTTC
T ss_pred HhcCCCCeEEEEeCCCCCC-cccHHHHHHHHHHHHHHHHhCCEEEEEeCcCCCC--c-ccchHHH----HHHHHHHHHhc
Confidence 44455445555554 567 9999999999875334444445667767664421 1 1122222 44456667899
Q ss_pred CCCceEEEEcCcCC
Q 025688 158 DVTKTFIFSDFDYV 171 (249)
Q Consensus 158 dp~kt~i~~ns~~~ 171 (249)
+.+.. ++.||+-+
T Consensus 84 ~wD~~-~~~QS~r~ 96 (331)
T d1gtra2 84 HWSGN-VRYSSDYF 96 (331)
T ss_dssp CCSSS-CEEGGGGH
T ss_pred ccccc-ceecchHH
Confidence 87532 45688854
No 15
>d1rqga2 c.26.1.1 (A:1-138,A:174-396) Methionyl-tRNA synthetase (MetRS) {Pyrococcus abyssi [TaxId: 29292]}
Probab=89.35 E-value=0.63 Score=38.67 Aligned_cols=43 Identities=23% Similarity=0.330 Sum_probs=24.7
Q ss_pred eEEEecc-CCCCCCccchhhH----HHHh-HHHHHHcCCCcEEEEecChh
Q 025688 86 FYLYTGR-GPSSEALHLGHLV----PFMF-TKYLQDAFKVPLVIQLTDDE 129 (249)
Q Consensus 86 ~~iYtG~-dPSg~sLHlGHlv----~~~~-l~~lQ~~g~~~v~i~IaD~~ 129 (249)
.+|-+++ -||| .|||||+. .... .|++...|+...+++=.|.+
T Consensus 4 ~~v~~~~P~p~G-~lHiGH~~~~~i~~Dil~R~~r~~G~~V~~v~g~D~~ 52 (361)
T d1rqga2 4 YMVTSALPYANG-PIHAGHLAGAYLPADIFVRYLRLKGEDVVFICGTDEH 52 (361)
T ss_dssp EEEEECCCBTTS-CCBHHHHHHHTHHHHHHHHHHHHTTCEEEEEEEEBCC
T ss_pred EEEecCCCCCCC-CcccccccccHHHHHHHHHHHHhcCCceEecCccCcc
Confidence 4444454 5888 89999954 2333 35565566444444445554
No 16
>d1ilea3 c.26.1.1 (A:1-197,A:387-641) Isoleucyl-tRNA synthetase (IleRS) {Thermus thermophilus [TaxId: 274]}
Probab=87.07 E-value=0.18 Score=43.98 Aligned_cols=64 Identities=16% Similarity=0.207 Sum_probs=40.2
Q ss_pred hHHHhhccccccCChhHHHHHHHcCCceEEEec-cCCCCCCccchhhHHHH---h-HHHHHHcCCCcEEEEecChh
Q 025688 59 HVFLRRGVFFAHRDLNDILDAYEKGEKFYLYTG-RGPSSEALHLGHLVPFM---F-TKYLQDAFKVPLVIQLTDDE 129 (249)
Q Consensus 59 ~~l~~Rgi~~~~~d~~~ll~~~e~~k~~~iYtG-~dPSg~sLHlGHlv~~~---~-l~~lQ~~g~~~v~i~IaD~~ 129 (249)
....+.+++.. ..+.-.++++|++++| =-|+| .+||||+.+.+ . .|++...|+..+++.=.|.|
T Consensus 19 ~~w~~~~~~~~------~~~~~~~~~~f~i~~~pPy~nG-~lHiGH~~~~v~~Dv~~Ry~r~~G~~V~~v~G~D~h 87 (452)
T d1ilea3 19 AFWKREKIFQK------SVENRKGGPRYTVYEGPPTANG-LPHVGHAQARSYKDLFPRYKTMRGYYAPRRAGWDTH 87 (452)
T ss_dssp HHHHHTTHHHH------HHHHTTTSCBCCBCCCCCCTTS-CCCTTHHHHHHHHHHHHHHHHHTTCBCCCEEEECCC
T ss_pred HHHHHCCCccC------CccccCCCCCEEEecCCCCCCC-cchhhhHHHHHHHHHHHHHHHcCCCceeccCCcCCC
Confidence 45556666642 2333344578888875 46787 89999977654 2 44555567655666666666
No 17
>d1ivsa4 c.26.1.1 (A:1-189,A:343-578) Valyl-tRNA synthetase (ValRS) {Thermus thermophilus [TaxId: 274]}
Probab=82.93 E-value=0.61 Score=40.08 Aligned_cols=46 Identities=17% Similarity=0.156 Sum_probs=27.5
Q ss_pred CCceEEEec-cCCCCCCccchhhHHHH---hHHHHHHcCCCcEEEE-ecChh
Q 025688 83 GEKFYLYTG-RGPSSEALHLGHLVPFM---FTKYLQDAFKVPLVIQ-LTDDE 129 (249)
Q Consensus 83 ~k~~~iYtG-~dPSg~sLHlGHlv~~~---~l~~lQ~~g~~~v~i~-IaD~~ 129 (249)
++++++.++ --|+| .|||||+.+.+ .+.++++.-+..|..+ =.|.|
T Consensus 33 ~~~f~i~~~pPy~NG-~lHlGH~~~yv~~Dv~~Ry~r~~G~~V~~v~g~D~h 83 (425)
T d1ivsa4 33 KPPFVIFMPPPNVTG-SLHMGHALDNSLQDALIRYKRMRGFEAVWLPGTDHA 83 (425)
T ss_dssp SCEEEEECCCCBSSS-CCCHHHHHHHHHHHHHHHHHHTTTSEEEEECEEBCC
T ss_pred CCcEEEEcCCCCCCC-CchhhHHHHHHHHHHHHHHHHhCCCceeecCcccCC
Confidence 456666665 46777 89999987754 3445555433455444 44444
No 18
>d1h3na3 c.26.1.1 (A:1-225,A:418-686) Leucyl-tRNA synthetase (LeuRS) {Thermus thermophilus [TaxId: 274]}
Probab=78.60 E-value=0.81 Score=39.95 Aligned_cols=47 Identities=19% Similarity=0.186 Sum_probs=31.3
Q ss_pred CCceEEEeccCCCCCCccchhhHHHH---hHHHHHHcCCCcEEEEecChh
Q 025688 83 GEKFYLYTGRGPSSEALHLGHLVPFM---FTKYLQDAFKVPLVIQLTDDE 129 (249)
Q Consensus 83 ~k~~~iYtG~dPSg~sLHlGHlv~~~---~l~~lQ~~g~~~v~i~IaD~~ 129 (249)
+++|++.+|-==..+.|||||++... ...++++.-+..+..+-|-+|
T Consensus 32 ~~~~~i~~~pP~~nG~lHiGH~~~~~~~D~~~R~~rm~G~~v~~~~G~D~ 81 (494)
T d1h3na3 32 RGKQYVLVMFPYPSGDLHMGHLKNYTMGDVLARFRRMQGYEVLHPMGWDA 81 (494)
T ss_dssp TCEEEEEECCCCSSSCCBHHHHHHHHHHHHHHHHHHHTTCEEECCCCBCC
T ss_pred CCCeEEEeCCCCCCCchhhhHHHHHHHHHHHHHHHHccCCcccCcCCcCc
Confidence 46699999953233489999988754 244556655567777766655
No 19
>d1f7ua2 c.26.1.1 (A:136-483) Arginyl-tRNA synthetase (ArgRS) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=75.93 E-value=1 Score=38.26 Aligned_cols=40 Identities=15% Similarity=0.203 Sum_probs=27.7
Q ss_pred EeccCCCCCCccchhhHHHHh----HHHHHHcCCCcEEEE-ecChh
Q 025688 89 YTGRGPSSEALHLGHLVPFMF----TKYLQDAFKVPLVIQ-LTDDE 129 (249)
Q Consensus 89 YtG~dPSg~sLHlGHlv~~~~----l~~lQ~~g~~~v~i~-IaD~~ 129 (249)
|+.==||+ .|||||+-+.+. .+.|.-.|+..+-.. |+|+=
T Consensus 14 ~~SaNpt~-plHvGH~R~aiiGd~larlL~~~G~~V~re~yvnD~G 58 (348)
T d1f7ua2 14 FSSPNIAK-PFHAGHLRSTIIGGFLANLYEKLGWEVIRMNYLGDWG 58 (348)
T ss_dssp CCCCBTTS-CCBGGGHHHHHHHHHHHHHHHHTTCEEEEEEEEBCCS
T ss_pred ecCCCCCC-CcchhhhhhHHHHHHHHHHHHHCCCeEEEEEEECCch
Confidence 77778998 899999887653 445667775443332 77754
No 20
>d1ffya3 c.26.1.1 (A:1-200,A:395-644) Isoleucyl-tRNA synthetase (IleRS) {Staphylococcus aureus [TaxId: 1280]}
Probab=74.85 E-value=2 Score=37.53 Aligned_cols=46 Identities=22% Similarity=0.241 Sum_probs=28.0
Q ss_pred CCceEEEeccC-CCCCCccchhhHHHH---hHHHHHHc-CCCcEEEEecChh
Q 025688 83 GEKFYLYTGRG-PSSEALHLGHLVPFM---FTKYLQDA-FKVPLVIQLTDDE 129 (249)
Q Consensus 83 ~k~~~iYtG~d-PSg~sLHlGHlv~~~---~l~~lQ~~-g~~~v~i~IaD~~ 129 (249)
+++|+++.|.= ||| .|||||+.... .+.++++. |...+++.=.|.|
T Consensus 47 ~~~f~~~~~pPy~nG-~lHiGH~~~~~~~Dv~~Ry~rm~G~~V~~~~G~D~~ 97 (450)
T d1ffya3 47 NETFILHDGPPYANG-NLHMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTH 97 (450)
T ss_dssp SCBCCEECCCCBSSS-CCCHHHHHHHHHHHHHHHHHHTTTCBCCCCCEEBCC
T ss_pred CCcEEEecCCCCCCC-chhhhHHHHHHHHHHHHHHHHhcCCccccccccccC
Confidence 46788998873 345 89999988654 23445554 5433444333444
No 21
>d1lw7a1 c.26.1.3 (A:57-219) Transcriptional regulator NadR, NMN-adenylyltransferase domain {Haemophilus influenzae [TaxId: 727]}
Probab=61.33 E-value=4.3 Score=28.79 Aligned_cols=38 Identities=16% Similarity=0.145 Sum_probs=24.1
Q ss_pred CCceEEEeccCCCCCCccchhhHHHHhHHHHHHcCCCcEEEEecC
Q 025688 83 GEKFYLYTGRGPSSEALHLGHLVPFMFTKYLQDAFKVPLVIQLTD 127 (249)
Q Consensus 83 ~k~~~iYtG~dPSg~sLHlGHlv~~~~l~~lQ~~g~~~v~i~IaD 127 (249)
+|++.+|.|.- +.+|+||+..+..+ .+.++. ++|.++.
T Consensus 1 ~kkigl~~G~F---dP~H~GH~~l~~~a---~~~~d~-v~v~i~~ 38 (163)
T d1lw7a1 1 EKKVGVIFGKF---YPVHTGHINMIYEA---FSKVDE-LHVIVCS 38 (163)
T ss_dssp CCCEEEEEECC---SSCCHHHHHHHHHH---HTTCSE-EEEEEEE
T ss_pred CCeEEEEeeeC---CCCCHHHHHHHHHH---HHhCCc-cEEEEEC
Confidence 36788999855 56999997766544 333443 4444443
No 22
>d1iq0a2 c.26.1.1 (A:97-466) Arginyl-tRNA synthetase (ArgRS) {Thermus thermophilus [TaxId: 274]}
Probab=59.72 E-value=2.7 Score=35.79 Aligned_cols=39 Identities=31% Similarity=0.439 Sum_probs=26.8
Q ss_pred EeccCCCCCCccchhhHHHHh----HHHHHHcCCCcEEE-EecCh
Q 025688 89 YTGRGPSSEALHLGHLVPFMF----TKYLQDAFKVPLVI-QLTDD 128 (249)
Q Consensus 89 YtG~dPSg~sLHlGHlv~~~~----l~~lQ~~g~~~v~i-~IaD~ 128 (249)
|+.-=||+ .|||||+-+.+. .+-|.-+|+..+-. -|+|+
T Consensus 13 f~SpN~~k-plHvGHlRs~iiGd~laril~~~G~~V~r~nyigD~ 56 (370)
T d1iq0a2 13 HTSVNPNK-ELHVGHLRNIALGDAIARILAYAGREVLVLNYIDDT 56 (370)
T ss_dssp CCCCCTTS-CCBHHHHHHHHHHHHHHHHHHHTTEEEEEEEEECTT
T ss_pred ecCCCCCC-CcchhhhhhHHHHHHHHHHHHHcCCEEEEEEeECCc
Confidence 67777998 999999887653 34566677543322 28886
No 23
>d1kama_ c.26.1.3 (A:) Nicotinamide mononucleotide (NMN) adenylyltransferase {Bacillus subtilis [TaxId: 1423]}
Probab=49.44 E-value=8.4 Score=27.55 Aligned_cols=41 Identities=15% Similarity=0.056 Sum_probs=25.5
Q ss_pred CCceEEEeccCCCCCCccchhhHHHHhHHHHHHcCC-CcEEEEecChh
Q 025688 83 GEKFYLYTGRGPSSEALHLGHLVPFMFTKYLQDAFK-VPLVIQLTDDE 129 (249)
Q Consensus 83 ~k~~~iYtG~dPSg~sLHlGHlv~~~~l~~lQ~~g~-~~v~i~IaD~~ 129 (249)
+|++.+|.|- -+.+|+||+-.+..+. +..+ ..|++...+..
T Consensus 1 ~kkIalfgGS---FdP~H~GH~~ii~~a~---~~~~~~~V~~~~~~~~ 42 (189)
T d1kama_ 1 SKKIGIFGGT---FDPPHNGHLLMANEVL---YQAGLDEIWFMPNQIP 42 (189)
T ss_dssp CCEEEEEEEC---CSSCCHHHHHHHHHHH---HHTTCSEEEEEECCCC
T ss_pred CCEEEEeccC---cCCCCHHHHHHHHHHH---HHcCCCEEEEEeccCC
Confidence 3688999884 4789999987555433 3232 34445555544
No 24
>d1jhda2 c.26.1.5 (A:174-396) ATP sulfurylase catalytic domain {Sulfur-oxidizing endosymbiont of Riftia pachyptila [TaxId: 35843]}
Probab=46.23 E-value=5.2 Score=31.11 Aligned_cols=39 Identities=10% Similarity=0.077 Sum_probs=27.9
Q ss_pred CChhHHHHHHHcCCceEEEeccCCCCCCccchhhHHHHhHH
Q 025688 71 RDLNDILDAYEKGEKFYLYTGRGPSSEALHLGHLVPFMFTK 111 (249)
Q Consensus 71 ~d~~~ll~~~e~~k~~~iYtG~dPSg~sLHlGHlv~~~~l~ 111 (249)
|...++.+.++ ++...-.+||+ |-+.+|.||+.-+..+.
T Consensus 5 ~~~~~~~~~~~-~~~~~~v~~f~-TfnP~H~GHl~ia~~a~ 43 (223)
T d1jhda2 5 RTAVEIRNEIK-EHGWSKVVAFQ-TRNPMHRAHEELCRMAM 43 (223)
T ss_dssp CCHHHHHHHHH-HHTCSSEEEEE-ESSCCCHHHHHHHHHHH
T ss_pred CCHHHHHHHHH-HCCCCEEEEee-CCCCCCHHHHHHHHHHH
Confidence 34567777776 45666777785 67899999988776543
No 25
>d1coza_ c.26.1.2 (A:) CTP:glycerol-3-phosphate cytidylyltransferase {Bacillus subtilis [TaxId: 1423]}
Probab=40.63 E-value=15 Score=25.92 Aligned_cols=29 Identities=31% Similarity=0.433 Sum_probs=18.2
Q ss_pred CCccchhhHHHHhHHHHHHcCCCcEEEEecChh
Q 025688 97 EALHLGHLVPFMFTKYLQDAFKVPLVIQLTDDE 129 (249)
Q Consensus 97 ~sLHlGHlv~~~~l~~lQ~~g~~~v~i~IaD~~ 129 (249)
+.+|.||+--+...+ ..|+ .+++.+.+++
T Consensus 11 D~lH~GH~~~l~~Ak---~~gd-~liV~v~sD~ 39 (126)
T d1coza_ 11 DLLHWGHIKLLERAK---QLGD-YLVVAISTDE 39 (126)
T ss_dssp CSCCHHHHHHHHHHH---TTSS-EEEEEEECHH
T ss_pred CCCCHHHHHHHHHHH---hhCc-eeeeeeeccc
Confidence 589999977554443 4454 4666566555
No 26
>d1f9aa_ c.26.1.3 (A:) Nicotinamide mononucleotide (NMN) adenylyltransferase {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=40.52 E-value=17 Score=25.74 Aligned_cols=49 Identities=18% Similarity=0.272 Sum_probs=27.1
Q ss_pred EEEeccCCCCCCccchhhHHHHhHHHHHHcCCCcEEEEecChhh--hhccCCCHHHHH
Q 025688 87 YLYTGRGPSSEALHLGHLVPFMFTKYLQDAFKVPLVIQLTDDEK--CMWKNLSVEESQ 142 (249)
Q Consensus 87 ~iYtG~dPSg~sLHlGHlv~~~~l~~lQ~~g~~~v~i~IaD~~k--~~~r~l~~e~i~ 142 (249)
.+|.|.= +.+|.||+--+..+ .+.++ .+++.++..+. ......+.++-.
T Consensus 3 gl~~G~F---dP~H~GH~~li~~a---~~~~d-~v~v~i~~~~~~~~~~~~~s~~~R~ 53 (164)
T d1f9aa_ 3 GFIIGRF---QPFHKGHLEVIKKI---AEEVD-EIIIGIGSAQKSHTLENPFTAGERI 53 (164)
T ss_dssp EEEEECC---TTCCHHHHHHHHHH---TTTCS-EEEEEECSTTCCSSSSCCSCHHHHH
T ss_pred EEEeccc---CCCCHHHHHHHHHH---HHhCC-CeEEEecCCccccCcCCCCCHHHHH
Confidence 4666633 46999997665543 33443 45566654442 222226776655
No 27
>d1od6a_ c.26.1.3 (A:) Phosphopantetheine adenylyltransferase {Thermus thermophilus [TaxId: 274]}
Probab=34.11 E-value=50 Score=22.62 Aligned_cols=37 Identities=24% Similarity=0.386 Sum_probs=19.9
Q ss_pred EEeccCCCCCCccchhhHHHHhHHHHHHcCCCcEEEE-ecChhhh
Q 025688 88 LYTGRGPSSEALHLGHLVPFMFTKYLQDAFKVPLVIQ-LTDDEKC 131 (249)
Q Consensus 88 iYtG~dPSg~sLHlGHlv~~~~l~~lQ~~g~~~v~i~-IaD~~k~ 131 (249)
+|-|. =+.+|+||+..+..+. +.++. +++. .+++.+.
T Consensus 4 ifgGs---FdP~H~GHl~ii~~a~---~~~D~-v~i~~~~~~~kk 41 (160)
T d1od6a_ 4 VYPGS---FDPLTNGHLDVIQRAS---RLFEK-VTVAVLENPSKR 41 (160)
T ss_dssp EEEEC---CTTCCHHHHHHHHHHH---HHSSE-EEEEEECC----
T ss_pred Eeeec---cCCcCHHHHHHHHHHH---HhCCE-EEEeccCCCCcc
Confidence 66663 3689999987765433 33544 4444 4455543
No 28
>d1ej2a_ c.26.1.3 (A:) Nicotinamide mononucleotide (NMN) adenylyltransferase {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=33.23 E-value=39 Score=23.83 Aligned_cols=73 Identities=18% Similarity=0.263 Sum_probs=38.3
Q ss_pred EEEeccCCCCCCccchhhHHHHhHHHHHHcCCCcEEEEecChhh-hhcc-CCCHHHHHHHHHHHHHHHHHcCCCCCceEE
Q 025688 87 YLYTGRGPSSEALHLGHLVPFMFTKYLQDAFKVPLVIQLTDDEK-CMWK-NLSVEESQRLARENAKDIIACGFDVTKTFI 164 (249)
Q Consensus 87 ~iYtG~dPSg~sLHlGHlv~~~~l~~lQ~~g~~~v~i~IaD~~k-~~~r-~l~~e~i~~~~~eni~~iiA~G~dp~kt~i 164 (249)
.+|.|.- +.+|.||+.-+..+ .+..+ .++++|+.... ...+ ..+.++-.++.+.. +...+.+.....+
T Consensus 3 gi~~G~F---dP~H~GH~~ii~~a---~~~~d-~v~v~i~~~~~~~~~~~~~~~~~R~~mi~~~---~~~~~~~~~~~~~ 72 (167)
T d1ej2a_ 3 GLLVGRM---QPFHRGHLQVIKSI---LEEVD-ELIICIGSAQLSHSIRDPFTAGERVMMLTKA---LSENGIPASRYYI 72 (167)
T ss_dssp EEEEECC---TTCCHHHHHHHHHH---TTTCS-EEEEEECSTTCCSSSSSCSCHHHHHHHHHHH---HHHTTCCGGGEEE
T ss_pred EEEeecc---CCCCHHHHHHHHHH---HHHCC-ceEEEEecCCCCCCccccccHHHHHHHHHHH---HHHcCCCceeEEe
Confidence 4566643 56999998765543 23333 56777775442 2222 36777666444332 2235554444444
Q ss_pred EEcCc
Q 025688 165 FSDFD 169 (249)
Q Consensus 165 ~~ns~ 169 (249)
....+
T Consensus 73 ~~~~~ 77 (167)
T d1ej2a_ 73 IPVQD 77 (167)
T ss_dssp EECCC
T ss_pred ccchh
Confidence 44433
No 29
>d1tfua_ c.26.1.3 (A:) Phosphopantetheine adenylyltransferase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=29.23 E-value=26 Score=24.31 Aligned_cols=38 Identities=21% Similarity=0.215 Sum_probs=22.1
Q ss_pred eEEEeccCCCCCCccchhhHHHHhHHHHHHcCCCcEEEEecChh
Q 025688 86 FYLYTGRGPSSEALHLGHLVPFMFTKYLQDAFKVPLVIQLTDDE 129 (249)
Q Consensus 86 ~~iYtG~dPSg~sLHlGHlv~~~~l~~lQ~~g~~~v~i~IaD~~ 129 (249)
+++|-|.= +.+|+||+-.+.. +-+.++..+++....+.
T Consensus 3 ~Av~~GsF---dPiH~GHl~i~~~---a~~~~d~~~v~~~~~~~ 40 (157)
T d1tfua_ 3 GAVCPGSF---DPVTLGHVDIFER---AAAQFDEVVVAILVNPA 40 (157)
T ss_dssp EEEEEECC---TTCCHHHHHHHHH---HHHHSSEEEEEEECCSS
T ss_pred EeEeCcCC---CCCCHHHHHHHHH---HHHhcChHHhhccccCc
Confidence 56777744 6799999865543 33335444444444444
No 30
>d1qjca_ c.26.1.3 (A:) Phosphopantetheine adenylyltransferase {Escherichia coli [TaxId: 562]}
Probab=26.87 E-value=34 Score=23.46 Aligned_cols=37 Identities=14% Similarity=0.295 Sum_probs=23.1
Q ss_pred eEEEeccCCCCCCccchhhHHHHhHHHHHHcCCCcEEEEecChh
Q 025688 86 FYLYTGRGPSSEALHLGHLVPFMFTKYLQDAFKVPLVIQLTDDE 129 (249)
Q Consensus 86 ~~iYtG~dPSg~sLHlGHlv~~~~l~~lQ~~g~~~v~i~IaD~~ 129 (249)
.++|-|.= +.+|.||+..+. +..+.++ .|++++++..
T Consensus 2 ~AifgGsF---dP~H~GHl~li~---~a~~~~D-~v~v~~~~~~ 38 (157)
T d1qjca_ 2 RAIYPGTF---DPITNGHIDIVT---RATQMFD-HVILAIAASP 38 (157)
T ss_dssp EEEEEECC---TTCCHHHHHHHH---HHHTTSS-EEEEEEESCC
T ss_pred EEEEeecc---CCCCHHHHHHHH---HHHHhCC-EeeecccCcc
Confidence 46776643 689999986544 4444454 4666666544
No 31
>d2ebna_ c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase {Flavobacterium meningosepticum, endoglycosidase F1 [TaxId: 238]}
Probab=25.11 E-value=41 Score=26.79 Aligned_cols=48 Identities=21% Similarity=0.237 Sum_probs=31.5
Q ss_pred HHHHHHcCCCcEEEEecChhh-hhccCCCHHHHHHHHHHHHHHHHHcCCC
Q 025688 110 TKYLQDAFKVPLVIQLTDDEK-CMWKNLSVEESQRLARENAKDIIACGFD 158 (249)
Q Consensus 110 l~~lQ~~g~~~v~i~IaD~~k-~~~r~l~~e~i~~~~~eni~~iiA~G~d 158 (249)
++.||+.| ..|.|.||-++. .-...++.+..++.+.+.+.-+...|||
T Consensus 73 i~~~q~~g-~KvllsigG~~~~~~~~~~~~~~~~~F~~~~~~~~~~y~lD 121 (285)
T d2ebna_ 73 LKPLQDKG-IKVILSILGNHDRSGIANLSTARAKAFAQELKNTCDLYNLD 121 (285)
T ss_dssp THHHHHTT-CEEEEEEECCSSSCCTTCBCHHHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHhCC-CEEEEEeccCCCCcccccCCHHHHHHHHHHHHHHHHHcCCc
Confidence 35689988 789999998873 2122367777776665555555556775
No 32
>d1b74a1 c.78.2.1 (A:1-105) Glutamate racemase {Aquifex pyrophilus [TaxId: 2714]}
Probab=21.67 E-value=1.1e+02 Score=20.98 Aligned_cols=51 Identities=16% Similarity=0.146 Sum_probs=33.4
Q ss_pred HHHhHHHHHHcCCCcEEEEecChhhhhccCCCHHHHHHHHHHHHHHHHHcC
Q 025688 106 PFMFTKYLQDAFKVPLVIQLTDDEKCMWKNLSVEESQRLARENAKDIIACG 156 (249)
Q Consensus 106 ~~~~l~~lQ~~g~~~v~i~IaD~~k~~~r~l~~e~i~~~~~eni~~iiA~G 156 (249)
++-.++.+++..-..=++.+||.-..=--..+.+++.+.+.+.+..+...|
T Consensus 12 GLtVl~~l~~~lP~~~~iY~~D~a~~PYG~ks~~~I~~~~~~~~~~l~~~~ 62 (105)
T d1b74a1 12 GLTVLKAIRNRYRKVDIVYLGDTARVPYGIRSKDTIIRYSLECAGFLKDKG 62 (105)
T ss_dssp HHHHHHHHHHHSSSCEEEEEECGGGCCGGGSCHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHCCCCCEEEEecCCCCCCCCCCHHHHHHHHHHHHHHHHHcC
Confidence 444566777766344567789987431112588999999988776555554
No 33
>d1o6ba_ c.26.1.3 (A:) Phosphopantetheine adenylyltransferase {Bacillus subtilis [TaxId: 1423]}
Probab=20.50 E-value=1.2e+02 Score=20.58 Aligned_cols=52 Identities=19% Similarity=0.206 Sum_probs=27.7
Q ss_pred eEEEeccCCCCCCccchhhHHHHhHHHHHHcCCCcEEEEecChhhhhccCCCHHHHHHHH
Q 025688 86 FYLYTGRGPSSEALHLGHLVPFMFTKYLQDAFKVPLVIQLTDDEKCMWKNLSVEESQRLA 145 (249)
Q Consensus 86 ~~iYtG~dPSg~sLHlGHlv~~~~l~~lQ~~g~~~v~i~IaD~~k~~~r~l~~e~i~~~~ 145 (249)
+.+|-|-- +.+|.||+..+..+ -+..+ .++++++..... ....+.++..++.
T Consensus 3 IaifgGsF---dPiH~GHl~i~~~a---~~~~D-~v~v~~~~~~~~-~~~~~~~~r~~~~ 54 (163)
T d1o6ba_ 3 IAVCPGSF---DPVTYGHLDIIKRG---AHIFE-QVYVCVLNNSSK-KPLFSVEERCELL 54 (163)
T ss_dssp EEEEEECC---TTCCHHHHHHHHHH---HHHSS-EEEEEECCCCSS-CCSSCHHHHHHHH
T ss_pred EEEecccc---CCCCHHHHHHHHHH---HHhCC-EEEEcccccccc-cccCCHHHHHHHH
Confidence 56777743 67899998765443 23343 345554433321 1125666555443
Done!