Query 025694
Match_columns 249
No_of_seqs 17 out of 19
Neff 2.6
Searched_HMMs 13730
Date Mon Mar 25 15:35:17 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025694.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/025694hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2ivxa1 a.74.1.1 (A:7-149) Cyc 18.7 34 0.0025 23.9 2.7 25 173-197 69-93 (143)
2 d2i53a1 a.74.1.1 (A:14-157) Cy 18.3 29 0.0021 24.6 2.2 23 173-195 75-97 (144)
3 d2nptb1 d.15.2.2 (B:42-123) Mi 17.6 11 0.0008 27.2 -0.4 20 126-148 34-53 (82)
4 d2c60a1 d.15.2.2 (A:43-122) Mi 17.2 12 0.00087 26.9 -0.2 20 126-148 34-53 (80)
5 d1g3nc1 a.74.1.1 (C:16-147) Vi 14.8 34 0.0024 24.4 1.8 22 176-197 77-98 (132)
6 d1bu2a1 a.74.1.1 (A:22-148) Vi 14.7 48 0.0035 23.5 2.6 22 176-197 72-93 (127)
7 d2i53a2 a.74.1.1 (A:158-267) C 14.1 1.1E+02 0.0077 21.0 4.3 53 175-227 44-105 (110)
8 d1w98b2 a.74.1.1 (B:88-227) G1 11.9 46 0.0033 23.7 1.8 23 177-199 86-108 (140)
9 d1ju8a_ g.3.6.4 (A:) Leginsuli 10.2 12 0.00087 23.5 -1.8 21 131-152 10-30 (37)
10 d1f5qb1 a.74.1.1 (B:6-146) Vir 9.8 69 0.005 23.0 2.1 23 176-198 85-107 (141)
No 1
>d2ivxa1 a.74.1.1 (A:7-149) Cyclin-T2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=18.70 E-value=34 Score=23.94 Aligned_cols=25 Identities=12% Similarity=0.119 Sum_probs=21.3
Q ss_pred CCCchHHHHHHHHHHHhhcCCCCCC
Q 025694 173 AEVPWHLIAIGIFFTVIKLPGPYYP 197 (249)
Q Consensus 173 ~~~pwhLl~i~~fF~liK~~gpy~p 197 (249)
.+..+++++++|+|...|+-.+.-+
T Consensus 69 ~~~~~~~va~acl~LA~K~eE~~~~ 93 (143)
T d2ivxa1 69 TKFNKNIISSTALFLAAKVEEQARK 93 (143)
T ss_dssp TTSCHHHHHHHHHHHHHHHTTCCCC
T ss_pred cccCHHHHHHHHHHHHHHhcccccc
Confidence 3467999999999999999998644
No 2
>d2i53a1 a.74.1.1 (A:14-157) Cyclin K {Human (Homo sapiens) [TaxId: 9606]}
Probab=18.28 E-value=29 Score=24.57 Aligned_cols=23 Identities=13% Similarity=0.104 Sum_probs=19.8
Q ss_pred CCCchHHHHHHHHHHHhhcCCCC
Q 025694 173 AEVPWHLIAIGIFFTVIKLPGPY 195 (249)
Q Consensus 173 ~~~pwhLl~i~~fF~liK~~gpy 195 (249)
.+...++++++|+|+..|+-...
T Consensus 75 ~~~~~~lva~acl~LA~K~eE~~ 97 (144)
T d2i53a1 75 KQFPRYVTGACCLFLAGKVEETP 97 (144)
T ss_dssp TTSCHHHHHHHHHHHHHHHTTCC
T ss_pred cchhHHHHHHHHHHHHHHhhccc
Confidence 45679999999999999998763
No 3
>d2nptb1 d.15.2.2 (B:42-123) Mitogen-activated protein kinase kinase kinase 2, MEKK 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=17.58 E-value=11 Score=27.23 Aligned_cols=20 Identities=15% Similarity=0.458 Sum_probs=15.9
Q ss_pred Hhhhhchhhhhhhccceeeeehh
Q 025694 126 AVSSLSEMSYCAHEKKLFLVPVP 148 (249)
Q Consensus 126 avSsLSEmsYc~~~nKel~IPig 148 (249)
|+---.||-|| |.|+.||+-
T Consensus 34 afGq~ldl~y~---n~EL~IPl~ 53 (82)
T d2nptb1 34 AFGQSMDLHYT---NNELVIPLT 53 (82)
T ss_dssp HHTSCEEEEEE---ETTEEEECC
T ss_pred HhCCeeeEEEe---cCeEEEecc
Confidence 34556799999 889999974
No 4
>d2c60a1 d.15.2.2 (A:43-122) Mitogen-activated protein kinase kinase kinase 3, MEKK 3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=17.24 E-value=12 Score=26.91 Aligned_cols=20 Identities=5% Similarity=0.157 Sum_probs=15.9
Q ss_pred Hhhhhchhhhhhhccceeeeehh
Q 025694 126 AVSSLSEMSYCAHEKKLFLVPVP 148 (249)
Q Consensus 126 avSsLSEmsYc~~~nKel~IPig 148 (249)
|+---.||-|| |.|+.||+-
T Consensus 34 afGq~ldl~y~---n~El~IPl~ 53 (80)
T d2c60a1 34 VFGQPLDLHYM---NNELSILLK 53 (80)
T ss_dssp HHSSCCEEEEE---CSSCEEECC
T ss_pred HhCCeeeeEEe---cCeEEEecc
Confidence 34556799999 999999974
No 5
>d1g3nc1 a.74.1.1 (C:16-147) Viral cyclin {Kaposi's sarcoma-associated herpesvirus [TaxId: 37296]}
Probab=14.80 E-value=34 Score=24.38 Aligned_cols=22 Identities=9% Similarity=-0.025 Sum_probs=18.4
Q ss_pred chHHHHHHHHHHHhhcCCCCCC
Q 025694 176 PWHLIAIGIFFTVIKLPGPYYP 197 (249)
Q Consensus 176 pwhLl~i~~fF~liK~~gpy~p 197 (249)
.++|+|++|+|+..|+-..+=|
T Consensus 77 ~lqLia~tcl~iAsK~ee~~~~ 98 (132)
T d1g3nc1 77 HFQKTGSACLLVASKLRSLTPI 98 (132)
T ss_dssp HHHHHHHHHHHHHHHHHCSSCC
T ss_pred HHHHHHHHHHHHHHHhcccCCC
Confidence 3799999999999999776533
No 6
>d1bu2a1 a.74.1.1 (A:22-148) Viral cyclin {Herpesvirus saimiri [TaxId: 10381]}
Probab=14.75 E-value=48 Score=23.48 Aligned_cols=22 Identities=9% Similarity=-0.109 Sum_probs=19.1
Q ss_pred chHHHHHHHHHHHhhcCCCCCC
Q 025694 176 PWHLIAIGIFFTVIKLPGPYYP 197 (249)
Q Consensus 176 pwhLl~i~~fF~liK~~gpy~p 197 (249)
..+|+|++|+|+..|+-..+-|
T Consensus 72 ~lqLi~~tcL~IAsK~ee~~~~ 93 (127)
T d1bu2a1 72 TLQKIGAACVLIGSKIRTVKPM 93 (127)
T ss_dssp THHHHHHHHHHHHHHHSSSSCC
T ss_pred HHHHHHHHHHHHHHHHHhcCCC
Confidence 4799999999999999887644
No 7
>d2i53a2 a.74.1.1 (A:158-267) Cyclin K {Human (Homo sapiens) [TaxId: 9606]}
Probab=14.07 E-value=1.1e+02 Score=20.98 Aligned_cols=53 Identities=17% Similarity=0.185 Sum_probs=34.7
Q ss_pred CchHHHHHHHHHHHhhcCCCC---------CCCcccccceecchhHHHHHHHHHHHHhcCcc
Q 025694 175 VPWHLIAIGIFFTVIKLPGPY---------YPYWGRLFIPHFANGALWRTLWFAFLWYRKPK 227 (249)
Q Consensus 175 ~pwhLl~i~~fF~liK~~gpy---------~p~wgriflpHfANGgL~q~Lw~~~lW~~~~k 227 (249)
+|=|.||+||++...|+.|-= .+.|=.+|-+.+.-..+..+.=-....|.+.|
T Consensus 44 ~~P~~IA~a~I~lA~~~~~~~ip~~~~~~~~~~W~~~f~~dvt~e~i~~i~~~il~lY~~~k 105 (110)
T d2i53a2 44 WEPEIIAVAVMYLAGRLCKFEIQEWTSKPMYRRWWEQFVQDVPVDVLEDICHQILDLYSQGK 105 (110)
T ss_dssp SCHHHHHHHHHHHHHHHHTCCGGGGBSSCCSSCGGGGTSSSCCHHHHHHHHHHHHTTTSSSC
T ss_pred cCcHHHHHHHHHHHHHHhCCCCCCcccCcccccHHHHHHccCCHHHHHHHHHHHHHHHcccc
Confidence 566889999999998887632 23466667666666666665544445555433
No 8
>d1w98b2 a.74.1.1 (B:88-227) G1/S-specific cyclin-E1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=11.87 E-value=46 Score=23.71 Aligned_cols=23 Identities=35% Similarity=0.466 Sum_probs=19.2
Q ss_pred hHHHHHHHHHHHhhcCCCCCCCc
Q 025694 177 WHLIAIGIFFTVIKLPGPYYPYW 199 (249)
Q Consensus 177 whLl~i~~fF~liK~~gpy~p~w 199 (249)
..|+|++|+|+..|+--.+-|..
T Consensus 86 lqL~a~acL~IAsK~ee~~~~~~ 108 (140)
T d1w98b2 86 LQLIGISSLFIAAKLEEIYPPKL 108 (140)
T ss_dssp HHHHHHHHHHHHHHHHCSSCCCH
T ss_pred HhHHHHHHHHHHHHHcccCCCCH
Confidence 68999999999999987665543
No 9
>d1ju8a_ g.3.6.4 (A:) Leginsulin {Soybean (Glycine max) [TaxId: 3847]}
Probab=10.20 E-value=12 Score=23.52 Aligned_cols=21 Identities=29% Similarity=0.565 Sum_probs=13.1
Q ss_pred chhhhhhhccceeeeehhHHHH
Q 025694 131 SEMSYCAHEKKLFLVPVPLLIG 152 (249)
Q Consensus 131 SEmsYc~~~nKel~IPigLl~G 152 (249)
-||-=|-+ ..-.-||+||++|
T Consensus 10 FemPpc~s-~dCRCiP~gL~vG 30 (37)
T d1ju8a_ 10 FEVPPCRS-RDCRCVPIGLFVG 30 (37)
T ss_dssp SSSSSSSC-TTSEEEECSSSCE
T ss_pred cccCCCCC-CCceEEEeEEEEE
Confidence 35555544 3346788888876
No 10
>d1f5qb1 a.74.1.1 (B:6-146) Viral cyclin {Murine herpesvirus 68 [TaxId: 33708]}
Probab=9.75 E-value=69 Score=22.96 Aligned_cols=23 Identities=9% Similarity=-0.148 Sum_probs=19.5
Q ss_pred chHHHHHHHHHHHhhcCCCCCCC
Q 025694 176 PWHLIAIGIFFTVIKLPGPYYPY 198 (249)
Q Consensus 176 pwhLl~i~~fF~liK~~gpy~p~ 198 (249)
..+|+|++|+|+..|+-..+-|.
T Consensus 85 ~lqL~a~tcL~IAsK~ee~~~~~ 107 (141)
T d1f5qb1 85 NYQSTAAVALHIAGKVRAYMPIK 107 (141)
T ss_dssp GHHHHHHHHHHHHHHHHCSSCCC
T ss_pred HHHHHHHHHHHHHHHHHhcCccc
Confidence 48999999999999998876554
Done!