Query 025696
Match_columns 249
No_of_seqs 132 out of 147
Neff 5.7
Searched_HMMs 29240
Date Mon Mar 25 15:37:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025696.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/025696hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4ev1_A Anabena TIC22; TIC22 fo 100.0 3.9E-50 1.3E-54 359.3 21.6 174 70-247 2-203 (252)
2 4e6z_A Apicoplast TIC22, putat 100.0 6E-45 2E-49 330.4 16.9 171 68-242 63-252 (279)
3 4ev1_A Anabena TIC22; TIC22 fo 99.5 4.3E-14 1.5E-18 126.3 7.1 119 52-174 100-227 (252)
4 4e6z_A Apicoplast TIC22, putat 99.1 2.8E-10 9.7E-15 103.0 9.2 110 52-171 162-272 (279)
5 2lrn_A Thiol:disulfide interch 79.2 18 0.00061 27.2 9.9 124 82-219 9-143 (152)
6 3or5_A Thiol:disulfide interch 76.9 18 0.00062 27.2 9.1 128 81-219 13-153 (165)
7 2yzh_A Probable thiol peroxida 71.6 16 0.00054 28.4 7.7 77 81-159 26-110 (171)
8 4eo3_A Bacterioferritin comigr 70.9 4.6 0.00016 36.2 4.8 74 80-161 2-86 (322)
9 3fw2_A Thiol-disulfide oxidore 70.5 31 0.001 25.7 9.4 124 81-218 10-149 (150)
10 4hde_A SCO1/SENC family lipopr 63.5 6.9 0.00024 31.0 4.0 61 81-142 11-77 (170)
11 1psq_A Probable thiol peroxida 59.1 13 0.00045 28.7 4.9 77 81-159 21-105 (163)
12 1q98_A Thiol peroxidase, TPX; 58.5 25 0.00086 27.1 6.5 75 81-160 22-107 (165)
13 2z0r_A Putative uncharacterize 56.7 18 0.0006 27.8 5.0 51 82-140 7-57 (103)
14 3p7x_A Probable thiol peroxida 55.9 17 0.00059 28.1 5.1 77 81-160 25-109 (166)
15 3fkf_A Thiol-disulfide oxidore 54.8 52 0.0018 23.9 7.5 123 81-217 10-146 (148)
16 3drn_A Peroxiredoxin, bacterio 53.7 24 0.00082 27.0 5.6 77 81-160 7-94 (161)
17 3zrd_A Thiol peroxidase; oxido 53.6 28 0.00096 28.2 6.3 75 80-160 56-142 (200)
18 1xvw_A Hypothetical protein RV 49.0 27 0.00092 26.3 5.1 78 81-159 14-100 (160)
19 3lwa_A Secreted thiol-disulfid 44.2 1.1E+02 0.0036 23.5 8.4 127 80-218 35-182 (183)
20 2wfc_A Peroxiredoxin 5, PRDX5; 41.7 24 0.00082 27.9 3.9 76 81-160 8-100 (167)
21 3erw_A Sporulation thiol-disul 41.4 95 0.0032 22.2 7.8 60 80-143 13-77 (145)
22 2jsy_A Probable thiol peroxida 38.5 25 0.00086 26.9 3.4 77 81-159 23-107 (167)
23 4g2e_A Peroxiredoxin; redox pr 37.3 9.4 0.00032 29.7 0.7 77 81-161 9-96 (157)
24 3ia1_A THIO-disulfide isomeras 36.7 77 0.0026 23.3 6.0 124 81-220 10-147 (154)
25 1xvq_A Thiol peroxidase; thior 35.3 60 0.0021 25.2 5.3 127 81-219 23-167 (175)
26 3kcm_A Thioredoxin family prot 34.5 85 0.0029 23.0 5.9 125 81-221 7-147 (154)
27 2ggt_A SCO1 protein homolog, m 33.8 26 0.0009 26.3 2.8 130 82-218 3-162 (164)
28 3gl3_A Putative thiol:disulfid 33.0 84 0.0029 23.0 5.6 122 81-219 8-144 (152)
29 3gkn_A Bacterioferritin comigr 32.9 12 0.00042 28.5 0.7 79 81-160 12-100 (163)
30 3fk8_A Disulphide isomerase; A 32.4 24 0.00081 25.9 2.3 49 74-124 79-132 (133)
31 3mng_A Peroxiredoxin-5, mitoch 32.3 35 0.0012 27.2 3.5 77 81-161 20-113 (173)
32 2b7k_A SCO1 protein; metalloch 32.1 58 0.002 26.0 4.8 76 82-159 21-112 (200)
33 3bid_A UPF0339 protein NMB1088 30.2 72 0.0025 22.0 4.3 40 81-129 11-50 (64)
34 3me7_A Putative uncharacterize 30.0 50 0.0017 25.7 4.0 133 81-219 6-164 (170)
35 3kij_A Probable glutathione pe 29.5 99 0.0034 23.9 5.7 58 81-142 17-80 (180)
36 3keb_A Probable thiol peroxida 29.3 37 0.0013 28.9 3.2 124 81-219 27-178 (224)
37 2rli_A SCO2 protein homolog, m 29.2 51 0.0017 24.9 3.8 75 83-159 7-98 (171)
38 1xzo_A BSSCO, hypothetical pro 28.4 48 0.0016 25.1 3.5 60 81-142 12-78 (174)
39 3ixr_A Bacterioferritin comigr 26.5 15 0.00051 29.1 0.2 75 82-160 31-116 (179)
40 2lja_A Putative thiol-disulfid 26.1 88 0.003 22.9 4.6 124 81-220 8-146 (152)
41 3eur_A Uncharacterized protein 24.5 1.1E+02 0.0037 22.3 4.8 60 81-144 10-78 (142)
42 1lu4_A Soluble secreted antige 23.9 1.2E+02 0.0042 21.3 5.0 118 81-215 3-134 (136)
43 3hdc_A Thioredoxin family prot 23.8 1.6E+02 0.0054 21.9 5.8 78 80-160 19-103 (158)
44 2f9s_A Thiol-disulfide oxidore 23.6 1.5E+02 0.005 21.7 5.5 123 82-219 6-140 (151)
45 3ewl_A Uncharacterized conserv 23.3 1.4E+02 0.0049 21.4 5.3 120 81-215 6-139 (142)
46 3raz_A Thioredoxin-related pro 23.0 1.9E+02 0.0064 21.2 6.0 48 73-129 93-144 (151)
47 2p31_A CL683, glutathione pero 23.0 1.5E+02 0.005 22.9 5.6 58 81-142 28-91 (181)
48 3uma_A Hypothetical peroxiredo 22.5 31 0.001 27.9 1.4 77 81-161 31-126 (184)
49 2v1m_A Glutathione peroxidase; 21.8 1.5E+02 0.0053 21.9 5.3 58 81-142 10-73 (169)
50 1jfu_A Thiol:disulfide interch 21.7 1.7E+02 0.0058 22.3 5.7 59 81-143 39-103 (186)
51 2k6v_A Putative cytochrome C o 20.9 86 0.0029 23.5 3.7 77 82-161 16-108 (172)
52 4evm_A Thioredoxin family prot 20.8 1.9E+02 0.0064 20.0 5.4 54 82-139 2-60 (138)
No 1
>4ev1_A Anabena TIC22; TIC22 fold, chaperon, protein transport, TIC22-like family, thylakoids, chaperone; HET: NHE; 1.95A {Anabaena SP}
Probab=100.00 E-value=3.9e-50 Score=359.34 Aligned_cols=174 Identities=22% Similarity=0.366 Sum_probs=163.8
Q ss_pred CChHHHHhhcCCCcEEEEEcCCCCeEEEeCCCC------CeeEEEEeecHHHHHHHHHHHHH---hcc---cccCCeEEE
Q 025696 70 LSSDFVSKTLAGTAVYTVSNSSNEFVLISDPNG------AKSIGLLCFRQEDAEAFLAQVRL---RRK---ELRSAAKVV 137 (249)
Q Consensus 70 L~~~~i~ekL~~VPVF~Vtn~~g~plli~~~~g------~~~v~~fF~s~~DAqa~L~qlk~---~~P---~l~~~~kV~ 137 (249)
||+++|+++|++||||+|||++|+||+++++++ +++|++||||++||++||+++|+ +|| ++++++||+
T Consensus 2 L~e~eV~ekL~~VPVF~Itn~~G~Pll~~~~~~~~~~~~~~~V~~~F~s~~dA~~~L~~lk~~~~~np~~~~~~~~~kV~ 81 (252)
T 4ev1_A 2 LSEQQIKEKLDSVPIYLVTNEKGLPLSRPLPNAPNGQKAGGSITGAYMSRQEAQAFINELRNAKNKDPKMQEIVKSLQVT 81 (252)
T ss_dssp CCHHHHHHHHTTSEEEEEECTTCCBCEEECCCCTTSCCSCSEEEEEESCHHHHHHHHHHHHHCSSCCHHHHHHHTTCEEE
T ss_pred CCHHHHHHHhcCCcEEEEECCCCCeEEEecCCccccccCCCeEEEEEecHHHHHHHHHHHHhccccCchhhhhccCceEE
Confidence 899999999999999999999999999998872 46899999999999999999999 999 999999999
Q ss_pred EEehhHHHhh------hcCCeeEEEecCHHHHHHHHHHhhhccc--CCCCCceEEeec------ceeeeeC--CeEEeee
Q 025696 138 PITLDQVYML------KVEGIAFRFLPDPAQIRNALELKAADVR--TGFDGVPVFQSE------LLVVKKK--NKRYCPV 201 (249)
Q Consensus 138 ~v~L~~vy~l------~~~~~~f~fVP~~~qV~~A~~L~~~~g~--~~f~GVPVF~~~------~Lti~~~--~~~~~Pl 201 (249)
+|+||+||++ +.+++.|+|||+++||++|++|++++|+ ++|+|||||+++ +|||+++ |++||||
T Consensus 82 ~vsL~~vyql~~~~~~k~~~l~F~fvP~~~qV~~A~~Ll~~~Gq~~~~f~gVPvF~~~~~~~~~~Lti~~~~~~~~~iPl 161 (252)
T 4ev1_A 82 AVPLGVIYQQLQQTKKDPNRLLFAFKPVDQEIKGAMDLLRQSGQQVNQFKSVPMFAVRFAPDQGYVPIKVGTGNEQVVPL 161 (252)
T ss_dssp EEEHHHHHHHHHHTTTCTTCEEEEEECCHHHHHHHHHHHHTTTCCCSCCCSCEEEEEESSTTSCBCCEEETTTTEEEEEE
T ss_pred EeeHHHHHHHHHhhccCCcCceEEEcCCHHHHHHHHHHHHHcCCCcccCCCccEEEEecCCCCccEEEEeCCCCCEEEee
Confidence 9999999999 3578999999999999999999999887 568899999976 7999999 9999999
Q ss_pred eecHHHHHHHHHHHHHhcCCCCCcceEEEEeHHHHHHHhhcCCcCC
Q 025696 202 YFQKEDIEKELSKVSRASRGAGVSQHIMVGSLEDVLKKMEVPCLNV 247 (249)
Q Consensus 202 FF~keDL~~~l~k~~k~~p~~~~~~~I~V~~Le~vi~~m~~~~~~~ 247 (249)
||+||||+++|+++++++|+ ++|+|++|++||++|++++++.
T Consensus 162 FF~KedL~~~l~~~kkq~P~----~~I~V~~Le~vI~~m~~~~d~~ 203 (252)
T 4ev1_A 162 FLSKQDAQGLLGQVKPKHPK----ADIQVLDIDGVLQTLQDKNDTW 203 (252)
T ss_dssp ESSHHHHHHHHHHHTTTCTT----CEEEEEEHHHHHHHHHHCCCGG
T ss_pred EecHHHHHHHHHHHHHhCCC----CcEEEeeHHHHHHHHhcCcccc
Confidence 99999999999999999987 8999999999999999998764
No 2
>4e6z_A Apicoplast TIC22, putative; TIC complex, import protein, transport protein; 2.15A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=6e-45 Score=330.38 Aligned_cols=171 Identities=19% Similarity=0.294 Sum_probs=152.2
Q ss_pred hcCChHHHHhhcCCCcEEEEEcCCCCeEEEeCCCCCeeEEEEeecHHHHHHHHHHHHH-hcccccCCeEEEEEehhHHHh
Q 025696 68 ATLSSDFVSKTLAGTAVYTVSNSSNEFVLISDPNGAKSIGLLCFRQEDAEAFLAQVRL-RRKELRSAAKVVPITLDQVYM 146 (249)
Q Consensus 68 ~aL~~~~i~ekL~~VPVF~Vtn~~g~plli~~~~g~~~v~~fF~s~~DAqa~L~qlk~-~~P~l~~~~kV~~v~L~~vy~ 146 (249)
.++++++|+|||++||||+|||++|+||++++++ ++|++||||++||+++|+++++ ++|++++++||++++|++||+
T Consensus 63 ~~~~e~~I~EKL~~VPVF~Itn~~G~Pll~~~~~--~~V~~fF~s~~DA~a~L~el~k~~~~~~~~~~kV~pvsL~kvy~ 140 (279)
T 4e6z_A 63 KRYDERPIEEKLEVIPVFLITNYNSSPYIFQENE--KQVCYMFLCPYDAENMLNDMIKYNGMKYNGNIKIHNITMKKAYE 140 (279)
T ss_dssp -----CCHHHHSTTSEEEEEECTTCCBCCEEETT--EEEEEEESSHHHHHHHHHHHHHHCHHHHTTSCEEEEEEHHHHHH
T ss_pred hcccHHhHHHHhcCCCEEEEEcCCCCEEEecCCC--CeEEEEECCHHHHHHHHHHHHhccCcccccCceEEEecHHHHHH
Confidence 4899999999999999999999999999998764 5899999999999999999755 558999999999999999998
Q ss_pred h------------------hcCCeeEEEecCHHHHHHHHHHhhhcccCCCCCceEEeecceeeeeCCeEEeeeeecHHHH
Q 025696 147 L------------------KVEGIAFRFLPDPAQIRNALELKAADVRTGFDGVPVFQSELLVVKKKNKRYCPVYFQKEDI 208 (249)
Q Consensus 147 l------------------~~~~~~f~fVP~~~qV~~A~~L~~~~g~~~f~GVPVF~~~~Lti~~~~~~~~PlFF~keDL 208 (249)
+ +.+++.|+|||+++||++|+.+++++|++ ++|||||++++|++++++++++|+||+||||
T Consensus 141 l~~~~~~~~~~~i~~~~~~k~~~l~fr~vP~~~qV~~A~~ll~~~gq~-~~gVPVF~~~~Lti~k~~k~iiPlFF~keDL 219 (279)
T 4e6z_A 141 LMKEFLQLEKMEVNKEDSKKKQNIYWKLISSKRQLQNALYYLSFTKKS-ELMYPVFYAENLYIQKDGSNIIPLFFDLEDL 219 (279)
T ss_dssp HHHHHHHHHHC----------CCEEEEEECCHHHHHHHHTTSCTTTST-TCCSEEEEETTCCEECSSSEEEEEESSHHHH
T ss_pred HHhhcccccchhcccccccCCcceeeEecCCHHHHHHHHHHHHhcCCc-CCCccEEEEeeEEEeeCCeEEEeeEecHHHH
Confidence 8 23579999999999999999999888865 8899999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCCCcceEEEEeHHHHHHHhhc
Q 025696 209 EKELSKVSRASRGAGVSQHIMVGSLEDVLKKMEV 242 (249)
Q Consensus 209 ~~~l~k~~k~~p~~~~~~~I~V~~Le~vi~~m~~ 242 (249)
+++|+++++++|+ ..+++|+|++|+++|..|+.
T Consensus 220 ~~~l~q~~~~~p~-~~~~~I~V~~L~~ll~~~d~ 252 (279)
T 4e6z_A 220 KEAIEEQKNKALS-KVDYKIKVLNMVDLIFTEDH 252 (279)
T ss_dssp HHHHHHHHTTCSS-CCCCCEEEEEHHHHHTCSCC
T ss_pred HHHHHHhhhcCCC-CCCCceEEEhHHHHHhhCCc
Confidence 9999999999987 45689999999999988754
No 3
>4ev1_A Anabena TIC22; TIC22 fold, chaperon, protein transport, TIC22-like family, thylakoids, chaperone; HET: NHE; 1.95A {Anabaena SP}
Probab=99.47 E-value=4.3e-14 Score=126.35 Aligned_cols=119 Identities=18% Similarity=0.235 Sum_probs=97.9
Q ss_pred CCCCeeeecccch-hhhhcCChH--HHHhhcCCCcEEEEEc-CCCCeEEEeCCCCCeeEEEEeecHHHHHHHHHHHHHhc
Q 025696 52 SVPPFAFLSQPKQ-ALAATLSSD--FVSKTLAGTAVYTVSN-SSNEFVLISDPNGAKSIGLLCFRQEDAEAFLAQVRLRR 127 (249)
Q Consensus 52 ~~~~fA~~~~~~~-~~a~aL~~~--~i~ekL~~VPVF~Vtn-~~g~plli~~~~g~~~v~~fF~s~~DAqa~L~qlk~~~ 127 (249)
.+..|+++|.+++ ..|+.|..+ +-++.+.|||||.+.. .++++|++...+|++.+++|||+++|++++|+++++++
T Consensus 100 ~~l~F~fvP~~~qV~~A~~Ll~~~Gq~~~~f~gVPvF~~~~~~~~~~Lti~~~~~~~~~iPlFF~KedL~~~l~~~kkq~ 179 (252)
T 4ev1_A 100 NRLLFAFKPVDQEIKGAMDLLRQSGQQVNQFKSVPMFAVRFAPDQGYVPIKVGTGNEQVVPLFLSKQDAQGLLGQVKPKH 179 (252)
T ss_dssp TCEEEEEECCHHHHHHHHHHHHTTTCCCSCCCSCEEEEEESSTTSCBCCEEETTTTEEEEEEESSHHHHHHHHHHHTTTC
T ss_pred cCceEEEcCCHHHHHHHHHHHHHcCCCcccCCCccEEEEecCCCCccEEEEeCCCCCEEEeeEecHHHHHHHHHHHHHhC
Confidence 4689999999977 777777665 3456788999999995 55578888654446789999999999999999999999
Q ss_pred ccccCCeEEEEEehhHHHhh--hcCC---eeEEEecCHHHHHHHHHHhhhcc
Q 025696 128 KELRSAAKVVPITLDQVYML--KVEG---IAFRFLPDPAQIRNALELKAADV 174 (249)
Q Consensus 128 P~l~~~~kV~~v~L~~vy~l--~~~~---~~f~fVP~~~qV~~A~~L~~~~g 174 (249)
|+ .+|.+++|+.+++. .+++ -.+.|||+.+.+++++++.+..+
T Consensus 180 P~----~~I~V~~Le~vI~~m~~~~d~~~~~ivfiPs~es~e~i~~~~~~~~ 227 (252)
T 4ev1_A 180 PK----ADIQVLDIDGVLQTLQDKNDTWLNQVVLVPSPESREYIRTLPKPPN 227 (252)
T ss_dssp TT----CEEEEEEHHHHHHHHHHCCCGGGGGEEEECCHHHHHHHHTSCCCC-
T ss_pred CC----CcEEEeeHHHHHHHHhcCcccccceEEEECCHHHHHHHHhccccCC
Confidence 97 89999999999987 2222 47899999999999999865443
No 4
>4e6z_A Apicoplast TIC22, putative; TIC complex, import protein, transport protein; 2.15A {Plasmodium falciparum 3D7}
Probab=99.08 E-value=2.8e-10 Score=103.02 Aligned_cols=110 Identities=16% Similarity=0.164 Sum_probs=88.8
Q ss_pred CCCCeeeecccch-hhhhcCChHHHHhhcCCCcEEEEEcCCCCeEEEeCCCCCeeEEEEeecHHHHHHHHHHHHHhcccc
Q 025696 52 SVPPFAFLSQPKQ-ALAATLSSDFVSKTLAGTAVYTVSNSSNEFVLISDPNGAKSIGLLCFRQEDAEAFLAQVRLRRKEL 130 (249)
Q Consensus 52 ~~~~fA~~~~~~~-~~a~aL~~~~i~ekL~~VPVF~Vtn~~g~plli~~~~g~~~v~~fF~s~~DAqa~L~qlk~~~P~l 130 (249)
....|.++|..++ ..|..+..+.- +.-.|||||.+.+ +++.. +++.++|+||+++|+++.++++++++|.
T Consensus 162 ~~l~fr~vP~~~qV~~A~~ll~~~g-q~~~gVPVF~~~~-----Lti~k--~~k~iiPlFF~keDL~~~l~q~~~~~p~- 232 (279)
T 4e6z_A 162 QNIYWKLISSKRQLQNALYYLSFTK-KSELMYPVFYAEN-----LYIQK--DGSNIIPLFFDLEDLKEAIEEQKNKALS- 232 (279)
T ss_dssp CCEEEEEECCHHHHHHHHTTSCTTT-STTCCSEEEEETT-----CCEEC--SSSEEEEEESSHHHHHHHHHHHHTTCSS-
T ss_pred cceeeEecCCHHHHHHHHHHHHhcC-CcCCCccEEEEee-----EEEee--CCeEEEeeEecHHHHHHHHHHhhhcCCC-
Confidence 4678999999877 67777766643 3467899999953 56644 3457999999999999999999999997
Q ss_pred cCCeEEEEEehhHHHhhhcCCeeEEEecCHHHHHHHHHHhh
Q 025696 131 RSAAKVVPITLDQVYMLKVEGIAFRFLPDPAQIRNALELKA 171 (249)
Q Consensus 131 ~~~~kV~~v~L~~vy~l~~~~~~f~fVP~~~qV~~A~~L~~ 171 (249)
....+|.+++|..+..-.. .-.|.|||+++.+++++++..
T Consensus 233 ~~~~~I~V~~L~~ll~~~d-~~kivFIPs~eSlefi~~l~~ 272 (279)
T 4e6z_A 233 KVDYKIKVLNMVDLIFTED-HKKFGFVPSTQSVKYLDKLNI 272 (279)
T ss_dssp CCCCCEEEEEHHHHHTCSC-CTTEEEECCHHHHHHHHHHHH
T ss_pred CCCCceEEEhHHHHHhhCC-cCeEEEECCHHHHHHHHHHhc
Confidence 4567899999999886533 347899999999999999854
No 5
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=79.17 E-value=18 Score=27.17 Aligned_cols=124 Identities=10% Similarity=0.095 Sum_probs=71.3
Q ss_pred CcEEEEEcCCCCeEEEeCCCCCeeEEEEeec------HHHHHHHHHHHHHhcccccCCeEEEEEehhHHHh----h-hcC
Q 025696 82 TAVYTVSNSSNEFVLISDPNGAKSIGLLCFR------QEDAEAFLAQVRLRRKELRSAAKVVPITLDQVYM----L-KVE 150 (249)
Q Consensus 82 VPVF~Vtn~~g~plli~~~~g~~~v~~fF~s------~~DAqa~L~qlk~~~P~l~~~~kV~~v~L~~vy~----l-~~~ 150 (249)
+|-|.++|.+|..+..+.-.|. .+...|.. +.. ...|+++.++.++ .+++|..|+.+.--+ . +..
T Consensus 9 ~p~f~l~~~~G~~~~l~~~~gk-~vll~F~a~~C~~C~~~-~~~l~~l~~~~~~--~~~~vv~v~~d~~~~~~~~~~~~~ 84 (152)
T 2lrn_A 9 APAITGIDLKGNSVSLNDFKGK-YVLVDFWFAGCSWCRKE-TPYLLKTYNAFKD--KGFTIYGVSTDRREEDWKKAIEED 84 (152)
T ss_dssp CCCCEEECSSSCEEESGGGTTS-EEEEEEECTTCTTHHHH-HHHHHHHHHHHTT--TTEEEEEEECCSCHHHHHHHHHHH
T ss_pred CCCceeEcCCCCEEeHHHcCCC-EEEEEEECCCChhHHHH-HHHHHHHHHHhcc--CCeEEEEEEccCCHHHHHHHHHHh
Confidence 6889999999998888765554 44444442 222 2334445443333 358898888874211 1 234
Q ss_pred CeeEEEecCHHHHHHHHHHhhhcccCCCCCceEEeecceeeeeCCeEEeeeeecHHHHHHHHHHHHHhc
Q 025696 151 GIAFRFLPDPAQIRNALELKAADVRTGFDGVPVFQSELLVVKKKNKRYCPVYFQKEDIEKELSKVSRAS 219 (249)
Q Consensus 151 ~~~f~fVP~~~qV~~A~~L~~~~g~~~f~GVPVF~~~~Lti~~~~~~~~PlFF~keDL~~~l~k~~k~~ 219 (249)
++.|.++.+..... ..+.+.-| ..|+|-++ .+.++|+ ++-.|.+.+++++.|+++.+..
T Consensus 85 ~~~~~~~~d~~~~~--~~~~~~~~---v~~~P~~~----lid~~G~-i~~~~~~~~~l~~~l~~l~~~~ 143 (152)
T 2lrn_A 85 KSYWNQVLLQKDDV--KDVLESYC---IVGFPHII----LVDPEGK-IVAKELRGDDLYNTVEKFVNGA 143 (152)
T ss_dssp TCCSEEEEECHHHH--HHHHHHTT---CCSSCEEE----EECTTSE-EEEECCCTTHHHHHHHHHHTSS
T ss_pred CCCCeEEecccchh--HHHHHHhC---CCcCCeEE----EECCCCe-EEEeeCCHHHHHHHHHHHHhhc
Confidence 56677776653221 11222112 34788643 2333333 4445568899999999987754
No 6
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=76.87 E-value=18 Score=27.19 Aligned_cols=128 Identities=13% Similarity=0.132 Sum_probs=70.6
Q ss_pred CCcEEEEEcCCCCeEEEeCCCCCeeEEEEeec------HHHHHHHHHHHHHhcccccCCeEEEEEehhHHHhh-----hc
Q 025696 81 GTAVYTVSNSSNEFVLISDPNGAKSIGLLCFR------QEDAEAFLAQVRLRRKELRSAAKVVPITLDQVYML-----KV 149 (249)
Q Consensus 81 ~VPVF~Vtn~~g~plli~~~~g~~~v~~fF~s------~~DAqa~L~qlk~~~P~l~~~~kV~~v~L~~vy~l-----~~ 149 (249)
..|-|.+++.+|..+....-.|. .+...|+. +.. ...+.++.++.++ .+++|..|+.+.--+. +.
T Consensus 13 ~~p~~~l~~~~g~~~~l~~~~gk-~vlv~f~~~~C~~C~~~-~~~l~~l~~~~~~--~~v~~v~v~~d~~~~~~~~~~~~ 88 (165)
T 3or5_A 13 PAPSFSGVTVDGKPFSSASLKGK-AYIVNFFATWCPPCRSE-IPDMVQVQKTWAS--RGFTFVGIAVNEQLPNVKNYMKT 88 (165)
T ss_dssp BCCCCEEECTTSCEEEGGGGTTC-EEEEEEECTTSHHHHHH-HHHHHHHHHHHTT--TTEEEEEEECSCCHHHHHHHHHH
T ss_pred CCCCceeeCCCCCEechhHcCCC-EEEEEEEcCcCHHHHHH-HHHHHHHHHHhcc--CCeEEEEEECCCCHHHHHHHHHH
Confidence 47889999999999887665553 44444542 222 2334455444443 3588888887642211 23
Q ss_pred CCeeEEEecCHHHHHHHHHHhhhcccCCCCCceEEeecceeeeeCCeEE--eeeeecHHHHHHHHHHHHHhc
Q 025696 150 EGIAFRFLPDPAQIRNALELKAADVRTGFDGVPVFQSELLVVKKKNKRY--CPVYFQKEDIEKELSKVSRAS 219 (249)
Q Consensus 150 ~~~~f~fVP~~~qV~~A~~L~~~~g~~~f~GVPVF~~~~Lti~~~~~~~--~PlFF~keDL~~~l~k~~k~~ 219 (249)
.++.|.++-+..++..+...... .+..|+|-++ .+.++|+.+ ..=+.+.+++.+.++++.++.
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~---~~i~~~P~~~----lid~~G~i~~~~~g~~~~~~l~~~l~~~l~~~ 153 (165)
T 3or5_A 89 QGIIYPVMMATPELIRAFNGYID---GGITGIPTSF----VIDASGNVSGVIVGPRSKADFDRIVKMALGAK 153 (165)
T ss_dssp HTCCSCEEECCHHHHHHHHTTST---TCSCSSSEEE----EECTTSBEEEEECSCCCHHHHHHHHHHHHC--
T ss_pred cCCCCceEecCHHHHHHHhhhhc---cCCCCCCeEE----EECCCCcEEEEEcCCCCHHHHHHHHHHHHhhh
Confidence 45666666666543333221111 1356888754 122222211 111357899999999887654
No 7
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=71.57 E-value=16 Score=28.36 Aligned_cols=77 Identities=8% Similarity=0.042 Sum_probs=51.7
Q ss_pred CCcEEEEEcCCCCeEEEeCCCCCeeEEEEeec---HHHHHHHHHHHHHhcccccCCeEEEEEehhHHHhh----hcCCe-
Q 025696 81 GTAVYTVSNSSNEFVLISDPNGAKSIGLLCFR---QEDAEAFLAQVRLRRKELRSAAKVVPITLDQVYML----KVEGI- 152 (249)
Q Consensus 81 ~VPVF~Vtn~~g~plli~~~~g~~~v~~fF~s---~~DAqa~L~qlk~~~P~l~~~~kV~~v~L~~vy~l----~~~~~- 152 (249)
.+|-|.++|.+|..+..+.-.|. .+..+|+. -.-....+.++++...++ .+++|..|+.|..-.+ ++.++
T Consensus 26 ~~P~f~l~~~~G~~~~l~~~~gk-~vvl~f~~~~~C~~C~~~~~~l~~~~~~~-~~v~vv~Is~d~~~~~~~~~~~~~~~ 103 (171)
T 2yzh_A 26 RAPEAVVVTKDLQEKIVGGAKDV-VQVIITVPSLDTPVCETETKKFNEIMAGM-EGVDVTVVSMDLPFAQKRFCESFNIQ 103 (171)
T ss_dssp BCCCEEEEETTSCEEEESSCCSS-EEEEEECSCTTSHHHHHHHHHHHHHTTTC-TTEEEEEEESSCHHHHHHHHHHTTCC
T ss_pred cCCceEEECCCCCEeeHHHhCCC-eEEEEEECCCCCCchHHHHHHHHHHHHHc-CCceEEEEeCCCHHHHHHHHHHcCCC
Confidence 47889999999999998776665 34444441 113344455555555556 7899999998765444 23566
Q ss_pred eEEEecC
Q 025696 153 AFRFLPD 159 (249)
Q Consensus 153 ~f~fVP~ 159 (249)
.|.++.|
T Consensus 104 ~~~~l~D 110 (171)
T 2yzh_A 104 NVTVASD 110 (171)
T ss_dssp SSEEEEC
T ss_pred CeEEeec
Confidence 7888877
No 8
>4eo3_A Bacterioferritin comigratory protein/NADH dehydro; thioredoxin-fold, alpha-beta-aplha sandwich fold, antioxidan oxidoreductase, FMN binding; HET: FMN; 1.65A {Thermotoga maritima}
Probab=70.86 E-value=4.6 Score=36.17 Aligned_cols=74 Identities=24% Similarity=0.274 Sum_probs=54.5
Q ss_pred CCCcEEEEEcCCCCeEEEeCCCCCeeEEEEee-------cHHHHHHHHHHHHHhcccccCCeEEEEEehhHHHhhh----
Q 025696 80 AGTAVYTVSNSSNEFVLISDPNGAKSIGLLCF-------RQEDAEAFLAQVRLRRKELRSAAKVVPITLDQVYMLK---- 148 (249)
Q Consensus 80 ~~VPVF~Vtn~~g~plli~~~~g~~~v~~fF~-------s~~DAqa~L~qlk~~~P~l~~~~kV~~v~L~~vy~l~---- 148 (249)
+-+|=|++.|.+|+.+..++-.|. .|.++|. +..++..|- +.+ ..++.|..|+.|....++
T Consensus 2 ak~p~F~l~~~~G~~~~Lsd~~Gk-~vvl~F~p~~~tp~C~~e~~~~~----~~~---~~~~~v~gis~D~~~~~~~f~~ 73 (322)
T 4eo3_A 2 ARVKHFELLTDEGKTFTHVDLYGK-YTILFFFPKAGTSGSTREAVEFS----REN---FEKAQVVGISRDSVEALKRFKE 73 (322)
T ss_dssp CBCCCCEEEETTSCEEEGGGTTTS-EEEEEECSSTTSHHHHHHHHHHH----HSC---CTTEEEEEEESCCHHHHHHHHH
T ss_pred CCCCCcEEECCCcCEEeHHHhCCC-eEEEEEECCCCCCCCHHHHHHHH----HHh---hCCCEEEEEeCCCHHHHHHHHH
Confidence 568999999999999998887775 4555554 566665552 222 246899999998887763
Q ss_pred cCCeeEEEecCHH
Q 025696 149 VEGIAFRFLPDPA 161 (249)
Q Consensus 149 ~~~~~f~fVP~~~ 161 (249)
+.++.|.++.|+.
T Consensus 74 ~~~l~fp~l~D~~ 86 (322)
T 4eo3_A 74 KNDLKVTLLSDPE 86 (322)
T ss_dssp HHTCCSEEEECTT
T ss_pred hhCCceEEEEcCc
Confidence 4678899988853
No 9
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=70.54 E-value=31 Score=25.75 Aligned_cols=124 Identities=13% Similarity=0.185 Sum_probs=69.3
Q ss_pred CCcEEEEEcCCCCeEEEe--CCCCCeeEEEEee--------cHHHHHHHHHHHHHhc-ccccCCeEEEEEehhHH---Hh
Q 025696 81 GTAVYTVSNSSNEFVLIS--DPNGAKSIGLLCF--------RQEDAEAFLAQVRLRR-KELRSAAKVVPITLDQV---YM 146 (249)
Q Consensus 81 ~VPVF~Vtn~~g~plli~--~~~g~~~v~~fF~--------s~~DAqa~L~qlk~~~-P~l~~~~kV~~v~L~~v---y~ 146 (249)
..|-|.++|.+|..+..+ .-.|. .+...|. ++.... .|.++.++. .+ .++.|..|+.+.- ++
T Consensus 10 ~~p~f~l~~~~g~~~~l~~~~~~gk-~vll~F~a~~C~~v~C~~~~~-~l~~l~~~~~~~--~~~~~v~v~~d~~~~~~~ 85 (150)
T 3fw2_A 10 YAPFFSLPNAKGEKITRSSDAFKQK-SLLINFWASWNDSISQKQSNS-ELREIYKKYKKN--KYIGMLGISLDVDKQQWK 85 (150)
T ss_dssp BCCCCCEEBTTCCEECTTSTTTTTS-EEEEEEECTTCCCHHHHHHHH-HHHHHHHHHTTC--SSEEEEEEECCSCHHHHH
T ss_pred cCCccEeECCCCCEEecchhhhCCC-EEEEEEEeCCCCchHHHHHHH-HHHHHHHHhccC--CCeEEEEEEcCCCHHHHH
Confidence 478899999999988876 55553 3444443 333333 344444432 21 4588999988743 21
Q ss_pred h--hcCCeeEEEecCHHHHHHHHHHhhhcccCCCCCceEEeecceeeeeCCeEEeeeeecHHHHHHHHHHHHHh
Q 025696 147 L--KVEGIAFRFLPDPAQIRNALELKAADVRTGFDGVPVFQSELLVVKKKNKRYCPVYFQKEDIEKELSKVSRA 218 (249)
Q Consensus 147 l--~~~~~~f~fVP~~~qV~~A~~L~~~~g~~~f~GVPVF~~~~Lti~~~~~~~~PlFF~keDL~~~l~k~~k~ 218 (249)
- +..++.|.++.+...... .+.+.-| ..++|-++ .+.++|+ ++=.+.+.+++++.++++.++
T Consensus 86 ~~~~~~~~~~~~~~d~~~~~~--~~~~~~~---v~~~P~~~----lid~~G~-i~~~~~~~~~l~~~l~~ll~~ 149 (150)
T 3fw2_A 86 DAIKRDTLDWEQVCDFGGLNS--EVAKQYS---IYKIPANI----LLSSDGK-ILAKNLRGEELKKKIENIVEE 149 (150)
T ss_dssp HHHHHTTCCSEEECCSCGGGC--HHHHHTT---CCSSSEEE----EECTTSB-EEEESCCHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCceEEEcCcccch--HHHHHcC---CCccCeEE----EECCCCE-EEEccCCHHHHHHHHHHHHhc
Confidence 1 345677777776521110 1111111 24788554 2333333 333445999999999887653
No 10
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=63.46 E-value=6.9 Score=31.02 Aligned_cols=61 Identities=15% Similarity=0.181 Sum_probs=37.4
Q ss_pred CCcEEEEEcCCCCeEEEeCCCCCeeEEEEee------cHHHHHHHHHHHHHhcccccCCeEEEEEehh
Q 025696 81 GTAVYTVSNSSNEFVLISDPNGAKSIGLLCF------RQEDAEAFLAQVRLRRKELRSAAKVVPITLD 142 (249)
Q Consensus 81 ~VPVF~Vtn~~g~plli~~~~g~~~v~~fF~------s~~DAqa~L~qlk~~~P~l~~~~kV~~v~L~ 142 (249)
.+|=|+++|.+|..+..++-+|...+..|++ ++.....+ .++.+.-.+.+.++++..|++|
T Consensus 11 ~~PdF~L~d~~G~~v~l~d~~Gk~vll~F~~t~Cp~~Cp~~~~~l-~~l~~~~~~~~~~v~~v~isvD 77 (170)
T 4hde_A 11 DLETFQFTNQDGKPFGTKDLKGKVWVADFMFTNCQTVCPPMTANM-AKLQKMAKEEKLDVQFVSFSVD 77 (170)
T ss_dssp CCCCCEEECTTSCEEEHHHHTTSCEEEEEECTTCSSSHHHHHHHH-HHHHHHHHHTTCCCEEEEEESC
T ss_pred cCCCcEEECCCCCEEeHHHhCCCEEEEEEECCCCCCcccHHHHHH-HHHHHhhhcccccceeEeeecC
Confidence 4788999999999998877667544444432 33333332 2333322222456888888876
No 11
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=59.09 E-value=13 Score=28.67 Aligned_cols=77 Identities=14% Similarity=0.157 Sum_probs=50.4
Q ss_pred CCcEEEEEcCCCCeEEEeCCCCCeeEEEEeec---HHHHHHHHHHHHHhcccccCCeEEEEEehhHHHhh----hcCCe-
Q 025696 81 GTAVYTVSNSSNEFVLISDPNGAKSIGLLCFR---QEDAEAFLAQVRLRRKELRSAAKVVPITLDQVYML----KVEGI- 152 (249)
Q Consensus 81 ~VPVF~Vtn~~g~plli~~~~g~~~v~~fF~s---~~DAqa~L~qlk~~~P~l~~~~kV~~v~L~~vy~l----~~~~~- 152 (249)
..|-|.++|.+|..+..+.-.|.. +..+|+. -.--...+..+++...++ .+++|..|+.|..-.+ +..++
T Consensus 21 ~~P~f~l~~~~G~~v~l~~~~gk~-vvl~F~~~~~c~~C~~~~~~l~~~~~~~-~~v~vv~is~d~~~~~~~~~~~~~~~ 98 (163)
T 1psq_A 21 KALDFSLTTTDLSKKSLADFDGKK-KVLSVVPSIDTGICSTQTRRFNEELAGL-DNTVVLTVSMDLPFAQKRWCGAEGLD 98 (163)
T ss_dssp BCCCCEEECTTSCEEEGGGGTTSE-EEEEECSCTTSHHHHHHHHHHHHHTTTC-TTEEEEEEESSCHHHHHHHHHHHTCT
T ss_pred CCCCEEEEcCCCcEeeHHHhCCCE-EEEEEECCCCCCccHHHHHHHHHHHHHc-CCcEEEEEECCCHHHHHHHHHhcCCC
Confidence 478899999999998887666653 4444442 122334444555544455 6899999999865544 23466
Q ss_pred eEEEecC
Q 025696 153 AFRFLPD 159 (249)
Q Consensus 153 ~f~fVP~ 159 (249)
.|.++-|
T Consensus 99 ~~~~l~D 105 (163)
T 1psq_A 99 NAIMLSD 105 (163)
T ss_dssp TSEEEEC
T ss_pred CcEEecC
Confidence 7888877
No 12
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=58.54 E-value=25 Score=27.13 Aligned_cols=75 Identities=15% Similarity=0.098 Sum_probs=49.4
Q ss_pred CCcEEEEEcCCCCeEEEeCCCCCeeEEEEee------cHHHHHHHHHHHHHhcccccCCeEEEEEehhHHHhhh----cC
Q 025696 81 GTAVYTVSNSSNEFVLISDPNGAKSIGLLCF------RQEDAEAFLAQVRLRRKELRSAAKVVPITLDQVYMLK----VE 150 (249)
Q Consensus 81 ~VPVF~Vtn~~g~plli~~~~g~~~v~~fF~------s~~DAqa~L~qlk~~~P~l~~~~kV~~v~L~~vy~l~----~~ 150 (249)
..|-|.++|.+|..+..+.-.|...+..||. +..+... |+++.+ ++ .+++|..|+.|....++ ..
T Consensus 22 ~~P~f~l~~~~G~~v~l~~~~gk~vvl~f~~~~~c~~C~~e~~~-l~~~~~---~~-~~v~vv~Is~d~~~~~~~~~~~~ 96 (165)
T 1q98_A 22 IVENFILVGNDLADVALNDFASKRKVLNIFPSIDTGVCATSVRK-FNQQAA---KL-SNTIVLCISADLPFAQARFCGAE 96 (165)
T ss_dssp BCCCCEEECTTSCEEEGGGGTTSEEEEEECSCSCSSCCCHHHHH-HHHHHH---HS-TTEEEEEEESSCHHHHTTCTTTT
T ss_pred CCCCeEEECCCCCEEehHHhCCCeEEEEEECCCCCCccHHHHHH-HHHHHH---Hc-CCCEEEEEeCCCHHHHHHHHHHc
Confidence 4788999999999988876666543333331 3444433 333333 23 57999999998766552 35
Q ss_pred Ce-eEEEecCH
Q 025696 151 GI-AFRFLPDP 160 (249)
Q Consensus 151 ~~-~f~fVP~~ 160 (249)
++ .|.++-|.
T Consensus 97 ~~~~~~~l~D~ 107 (165)
T 1q98_A 97 GIENAKTVSTF 107 (165)
T ss_dssp TCTTEEEEECT
T ss_pred CCCceEEeecc
Confidence 67 69888885
No 13
>2z0r_A Putative uncharacterized protein TTHA0547; alpha/beta protein, structural genomics, unknown function; 2.30A {Thermus thermophilus}
Probab=56.66 E-value=18 Score=27.78 Aligned_cols=51 Identities=20% Similarity=0.295 Sum_probs=39.9
Q ss_pred CcEEEEEcCCCCeEEEeCCCCCeeEEEEeecHHHHHHHHHHHHHhcccccCCeEEEEEe
Q 025696 82 TAVYTVSNSSNEFVLISDPNGAKSIGLLCFRQEDAEAFLAQVRLRRKELRSAAKVVPIT 140 (249)
Q Consensus 82 VPVF~Vtn~~g~plli~~~~g~~~v~~fF~s~~DAqa~L~qlk~~~P~l~~~~kV~~v~ 140 (249)
=|.|.+.+..|+.++..... . ...++|.|.+.|++|+.. .|. .+.+|.+..
T Consensus 7 g~wY~L~~~~gEhl~L~~lg-~-rlAliwTs~~~A~~f~~~----~p~--~Gm~V~~l~ 57 (103)
T 2z0r_A 7 GTWYVLEGDPGEHLVVEALG-E-RLSGIWTSRELAEAFLAH----HPH--LGMRVSALE 57 (103)
T ss_dssp SCEEEEESSTTCCCEEEETT-E-EEEEEBSCHHHHHHHHHT----SCS--SCCEEEEEC
T ss_pred CCEEEecCCcCceeEEeccC-C-ceEEEEechHHHHHHHhh----CCc--cccEEeecc
Confidence 48999999899988886653 3 588999999999999754 576 457776653
No 14
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=55.87 E-value=17 Score=28.07 Aligned_cols=77 Identities=16% Similarity=0.134 Sum_probs=49.6
Q ss_pred CCcEEEEEcCCCCeEEEeCCCCCeeEEEEee-c--HHHHHHHHHHHHHhcccccCCeEEEEEehhHHHhhh----cCCe-
Q 025696 81 GTAVYTVSNSSNEFVLISDPNGAKSIGLLCF-R--QEDAEAFLAQVRLRRKELRSAAKVVPITLDQVYMLK----VEGI- 152 (249)
Q Consensus 81 ~VPVF~Vtn~~g~plli~~~~g~~~v~~fF~-s--~~DAqa~L~qlk~~~P~l~~~~kV~~v~L~~vy~l~----~~~~- 152 (249)
..|=|.++|.+|..+..++-.|. .+..+|+ . -.--...+..+.+...+ .++.|..|+.|....++ ..++
T Consensus 25 ~aP~f~l~~~~G~~~~l~~~~Gk-~vvl~f~~~~~c~~C~~~~~~l~~~~~~--~~~~vv~is~d~~~~~~~~~~~~~~~ 101 (166)
T 3p7x_A 25 FAPDFTVLDNDLNQVTLADYAGK-KKLISVVPSIDTGVCDQQTRKFNSDASK--EEGIVLTISADLPFAQKRWCASAGLD 101 (166)
T ss_dssp BCCCCEEECTTSCEEEGGGGTTS-CEEEEECSCTTSHHHHHHHHHHHHHSCT--TTSEEEEEESSCHHHHHHHHHHHTCS
T ss_pred CCCCeEEEcCCCCEEeHHHhCCC-cEEEEEECCCCCCccHHHHHHHHHHhhc--CCCEEEEEECCCHHHHHHHHHHcCCC
Confidence 47889999999999888766664 3444454 1 11122233333333333 67899999998766552 3567
Q ss_pred eEEEecCH
Q 025696 153 AFRFLPDP 160 (249)
Q Consensus 153 ~f~fVP~~ 160 (249)
.|.++-|.
T Consensus 102 ~~~~l~D~ 109 (166)
T 3p7x_A 102 NVITLSDH 109 (166)
T ss_dssp SCEEEECT
T ss_pred ceEEccCC
Confidence 78888877
No 15
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=54.83 E-value=52 Score=23.86 Aligned_cols=123 Identities=15% Similarity=0.125 Sum_probs=67.7
Q ss_pred CCcEEEEEcCCCCeEEEe--CCCCCeeEEEEee------cHHHHHHHHHHHHHhc-ccccCCeEEEEEehhHHH----hh
Q 025696 81 GTAVYTVSNSSNEFVLIS--DPNGAKSIGLLCF------RQEDAEAFLAQVRLRR-KELRSAAKVVPITLDQVY----ML 147 (249)
Q Consensus 81 ~VPVF~Vtn~~g~plli~--~~~g~~~v~~fF~------s~~DAqa~L~qlk~~~-P~l~~~~kV~~v~L~~vy----~l 147 (249)
.+|-|.+++.+|..+..+ .-.|. .+...|+ ++.... .+.++.++. .+ .+++|..|+.+.-- +.
T Consensus 10 ~~p~~~l~~~~g~~~~l~~~~~~gk-~vll~F~~~~C~~C~~~~~-~l~~l~~~~~~~--~~~~~v~v~~d~~~~~~~~~ 85 (148)
T 3fkf_A 10 SAPYFSLPNEKGEKLSRSAERFRNR-YLLLNFWASWCDPQPEANA-ELKRLNKEYKKN--KNFAMLGISLDIDREAWETA 85 (148)
T ss_dssp BCCCCCEEBTTSCEECTTSTTTTTS-EEEEEEECGGGCCCHHHHH-HHHHHHHHTTTC--TTEEEEEEECCSCHHHHHHH
T ss_pred cCCCeEeeCCCCCEEeccccccCCc-EEEEEEECCCCHHHHHHhH-HHHHHHHHhcCC--CCeEEEEEECCCCHHHHHHH
Confidence 478899999999988776 44553 4444444 333333 445555543 32 45888888876422 11
Q ss_pred -hcCCeeEEEecCHHHHHHHHHHhhhcccCCCCCceEEeecceeeeeCCeEEeeeeecHHHHHHHHHHHHH
Q 025696 148 -KVEGIAFRFLPDPAQIRNALELKAADVRTGFDGVPVFQSELLVVKKKNKRYCPVYFQKEDIEKELSKVSR 217 (249)
Q Consensus 148 -~~~~~~f~fVP~~~qV~~A~~L~~~~g~~~f~GVPVF~~~~Lti~~~~~~~~PlFF~keDL~~~l~k~~k 217 (249)
+..++.|..+-+..... ..+.+.-| ..|+|-++ .+.++|+ ++-.+.+.+++.+.++++.+
T Consensus 86 ~~~~~~~~~~~~d~~~~~--~~~~~~~~---v~~~P~~~----lid~~G~-i~~~~~~~~~l~~~l~~ll~ 146 (148)
T 3fkf_A 86 IKKDTLSWDQVCDFTGLS--SETAKQYA---ILTLPTNI----LLSPTGK-ILARDIQGEALTGKLKELLK 146 (148)
T ss_dssp HHHTTCCSEEECCSCGGG--CHHHHHTT---CCSSSEEE----EECTTSB-EEEESCCHHHHHHHHHHHC-
T ss_pred HHHcCCCceEEEccCCcc--hHHHHhcC---CCCcCEEE----EECCCCe-EEEecCCHHHHHHHHHHHHc
Confidence 23556666666542111 01111111 34788654 2223333 33334499999999988754
No 16
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=53.66 E-value=24 Score=26.98 Aligned_cols=77 Identities=18% Similarity=0.245 Sum_probs=49.8
Q ss_pred CCcEEEEEcCCCCeEEEeCCCCCeeEEEEee-------cHHHHHHHHHHHHHhcccccCCeEEEEEehhHHHhh----hc
Q 025696 81 GTAVYTVSNSSNEFVLISDPNGAKSIGLLCF-------RQEDAEAFLAQVRLRRKELRSAAKVVPITLDQVYML----KV 149 (249)
Q Consensus 81 ~VPVF~Vtn~~g~plli~~~~g~~~v~~fF~-------s~~DAqa~L~qlk~~~P~l~~~~kV~~v~L~~vy~l----~~ 149 (249)
..|-|.++|.+|..+..+.-.|...+..+|+ +...... |.++.++..+ .+++|..|+.|..-.+ +.
T Consensus 7 ~~P~f~l~~~~G~~~~l~~~~gk~~vvl~F~~a~~C~~C~~~~~~-l~~~~~~~~~--~~v~vv~vs~d~~~~~~~~~~~ 83 (161)
T 3drn_A 7 KAPLFEGIADNGEKISLSDYIGKHNIVLYFYPKDDTPGSTREASA-FRDNWDLLKD--YDVVVIGVSSDDINSHKRFKEK 83 (161)
T ss_dssp BCCCCEEEETTSCEEEGGGTTTTSEEEEEECSCTTCHHHHHHHHH-HHHTHHHHHT--TCEEEEEEESCCHHHHHHHHHH
T ss_pred cCCCeEeecCCCCEEEHHHhcCCCCEEEEEEcCCCCCchHHHHHH-HHHHHHHHHH--cCCEEEEEeCCCHHHHHHHHHH
Confidence 4788999999999988877666542555565 3444433 3333333222 3589999999865554 24
Q ss_pred CCeeEEEecCH
Q 025696 150 EGIAFRFLPDP 160 (249)
Q Consensus 150 ~~~~f~fVP~~ 160 (249)
.++.|.++.+.
T Consensus 84 ~~~~~~~~~d~ 94 (161)
T 3drn_A 84 YKLPFILVSDP 94 (161)
T ss_dssp TTCCSEEEECT
T ss_pred hCCCceEEECC
Confidence 56778888774
No 17
>3zrd_A Thiol peroxidase; oxidoreductase, 2Cys peroxiredoxin, thioredoxin-fold, ROS PR; 1.74A {Yersinia pseudotuberculosis} PDB: 2xpe_A 2xpd_A 3zre_A 2yjh_A 4af2_A 3hvs_A* 1qxh_A* 3i43_A* 3hvv_A 3hvx_A
Probab=53.58 E-value=28 Score=28.23 Aligned_cols=75 Identities=20% Similarity=0.167 Sum_probs=52.0
Q ss_pred CCCcEEEEEcCCCCeEEEeCCCCCeeEEEEee-------cHHHHHHHHHHHHHhcccccCCeEEEEEehhHHHhhh----
Q 025696 80 AGTAVYTVSNSSNEFVLISDPNGAKSIGLLCF-------RQEDAEAFLAQVRLRRKELRSAAKVVPITLDQVYMLK---- 148 (249)
Q Consensus 80 ~~VPVF~Vtn~~g~plli~~~~g~~~v~~fF~-------s~~DAqa~L~qlk~~~P~l~~~~kV~~v~L~~vy~l~---- 148 (249)
...|=|.++|.+|..+..++-.|.. +..+|+ +..+... |+++.+ ++ .++.|..|+.|....++
T Consensus 56 ~~aPdf~l~d~~G~~v~L~d~~Gk~-vvl~F~~~~~c~~C~~e~~~-l~~l~~---~~-~~v~vv~Is~D~~~~~~~~~~ 129 (200)
T 3zrd_A 56 DKAKDFTLVAKDLSDVALSSFAGKR-KVLNIFPSIDTGVCAASVRK-FNQLAG---EL-ENTVVLCISSDLPFAQSRFCG 129 (200)
T ss_dssp CBCCCCEEECTTSCEEEGGGGTTSE-EEEEECSCCCCSCCCHHHHH-HHHHHH---TS-TTEEEEEEESSCHHHHTTCTT
T ss_pred CCCCCeEEECCCCCEEcHHHhCCCc-EEEEEECCCCCchhHHHHHH-HHHHHH---Hh-CCCEEEEEECCCHHHHHHHHH
Confidence 3578899999999999887766643 444444 3444433 344444 33 57999999998776663
Q ss_pred cCCe-eEEEecCH
Q 025696 149 VEGI-AFRFLPDP 160 (249)
Q Consensus 149 ~~~~-~f~fVP~~ 160 (249)
..++ .|.++-|.
T Consensus 130 ~~~~~~f~~l~D~ 142 (200)
T 3zrd_A 130 AEGLSNVITLSTL 142 (200)
T ss_dssp TTTCTTEEEEETT
T ss_pred HcCCCCceEEecC
Confidence 4578 89999886
No 18
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=49.05 E-value=27 Score=26.33 Aligned_cols=78 Identities=21% Similarity=0.314 Sum_probs=49.5
Q ss_pred CCcEEEEEcCCCCeEEEeCCCCCeeEEEEee----cHHHHHHHHHHHHHhccccc-CCeEEEEEehhHHHhh----hcCC
Q 025696 81 GTAVYTVSNSSNEFVLISDPNGAKSIGLLCF----RQEDAEAFLAQVRLRRKELR-SAAKVVPITLDQVYML----KVEG 151 (249)
Q Consensus 81 ~VPVF~Vtn~~g~plli~~~~g~~~v~~fF~----s~~DAqa~L~qlk~~~P~l~-~~~kV~~v~L~~vy~l----~~~~ 151 (249)
.+|-|.++|.+|..+..+.-.|.+.+...|+ +. .-...+..+++-..++. .+++|..|+.|..-.+ +..+
T Consensus 14 ~~p~f~l~~~~G~~~~l~~~~gk~~vvl~F~~a~~C~-~C~~~~~~l~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~ 92 (160)
T 1xvw_A 14 TAPDFTLRDQNQQLVTLRGYRGAKNVLLVFFPLAFTG-ICQGELDQLRDHLPEFENDDSAALAISVGPPPTHKIWATQSG 92 (160)
T ss_dssp BCCCCEEECTTSCEEEGGGGTTTCEEEEEECSCTTSS-HHHHHHHHHHHTGGGTSSSSEEEEEEESCCHHHHHHHHHHHT
T ss_pred CCCCeEeEcCCCCEEeHHHhcCCCCEEEEEECCCCCC-chHHHHHHHHHHHHHHHHCCcEEEEEeCCCHHHHHHHHHhcC
Confidence 4788999999999988876666534555555 22 33444455554444443 4689999998764444 2345
Q ss_pred eeEEEecC
Q 025696 152 IAFRFLPD 159 (249)
Q Consensus 152 ~~f~fVP~ 159 (249)
+.|.++-+
T Consensus 93 ~~~~~~~d 100 (160)
T 1xvw_A 93 FTFPLLSD 100 (160)
T ss_dssp CCSCEEEC
T ss_pred CCceEEec
Confidence 66777766
No 19
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=44.19 E-value=1.1e+02 Score=23.53 Aligned_cols=127 Identities=10% Similarity=0.062 Sum_probs=64.2
Q ss_pred CCCcEEEEEcC--CCCeEEEeCCCCCeeEEEEee------cHHHHHHHHHHHHHhcccc----cCCeEEEEEehhH--HH
Q 025696 80 AGTAVYTVSNS--SNEFVLISDPNGAKSIGLLCF------RQEDAEAFLAQVRLRRKEL----RSAAKVVPITLDQ--VY 145 (249)
Q Consensus 80 ~~VPVF~Vtn~--~g~plli~~~~g~~~v~~fF~------s~~DAqa~L~qlk~~~P~l----~~~~kV~~v~L~~--vy 145 (249)
..+|=|.+++- +|..+..+.-.|. .+..+|+ ++.... .|+++.++..+. ..+++|..|+.+. .-
T Consensus 35 ~~~p~f~l~~~~~~g~~~~l~~~~gk-~vlv~F~a~~C~~C~~~~~-~l~~l~~~~~~~~~~~~~~v~~v~v~~d~~~~~ 112 (183)
T 3lwa_A 35 QQLPDIGGDSLMEEGTQINLSDFENQ-VVILNAWGQWCAPCRSESD-DLQIIHEELQAAGNGDTPGGTVLGINVRDYSRD 112 (183)
T ss_dssp CCCCCCEEEBSSSTTCEEEGGGGTTS-EEEEEEECTTCHHHHHHHH-HHHHHHHHHHHCC---CCSEEEEEEECSCCCHH
T ss_pred CCCCceeccccccCCcEecHHHhCCC-EEEEEEECCcCHhHHHHHH-HHHHHHHHHHhcCCCccCCcEEEEEECCCCCHH
Confidence 46899999999 9999988766554 3444444 222222 334444433331 1223888888765 21
Q ss_pred hh----hcCCeeEEEecCHHHHHHHHHHhhhcccCCCCCce-EEeecceeeeeCCeEE--eeeeecHHHHHHHHHHHHHh
Q 025696 146 ML----KVEGIAFRFLPDPAQIRNALELKAADVRTGFDGVP-VFQSELLVVKKKNKRY--CPVYFQKEDIEKELSKVSRA 218 (249)
Q Consensus 146 ~l----~~~~~~f~fVP~~~qV~~A~~L~~~~g~~~f~GVP-VF~~~~Lti~~~~~~~--~PlFF~keDL~~~l~k~~k~ 218 (249)
.+ +..++.|.++-+... .+.+.-|.-...++| +|+ |.++++.+ ..=..+.++|.+.++++.++
T Consensus 113 ~~~~~~~~~~~~~~~~~d~~~-----~~~~~~~~~~v~~~P~~~l-----id~~G~i~~~~~g~~~~~~l~~~l~~ll~~ 182 (183)
T 3lwa_A 113 IAQDFVTDNGLDYPSIYDPPF-----MTAASLGGVPASVIPTTIV-----LDKQHRPAAVFLREVTSKDVLDVALPLVDE 182 (183)
T ss_dssp HHHHHHHHTTCCSCEEECTTC-----GGGGGTTTCCTTCCSEEEE-----ECTTSCEEEEECSCCCHHHHHHHHHHHHHC
T ss_pred HHHHHHHHcCCCccEEECCcc-----hHHHHhccCCCCCCCeEEE-----ECCCCcEEEEEcCCCCHHHHHHHHHHHHhc
Confidence 11 234455555444321 111111111235788 333 21222211 11124789999999887653
No 20
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=41.75 E-value=24 Score=27.86 Aligned_cols=76 Identities=17% Similarity=0.295 Sum_probs=48.8
Q ss_pred CCcEEEEE-cCCCCeEEEeCC-CCCeeEEEEee-------cHH-HHHHHHHHHHHhcccccCCe-EEEEEehhHHHhh--
Q 025696 81 GTAVYTVS-NSSNEFVLISDP-NGAKSIGLLCF-------RQE-DAEAFLAQVRLRRKELRSAA-KVVPITLDQVYML-- 147 (249)
Q Consensus 81 ~VPVF~Vt-n~~g~plli~~~-~g~~~v~~fF~-------s~~-DAqa~L~qlk~~~P~l~~~~-kV~~v~L~~vy~l-- 147 (249)
..|-|.+. +.+|..+..++- .|.. +.++|+ +.. ++..+-+..++- . ..++ +|..|+.+....+
T Consensus 8 ~aP~f~l~~~~~G~~v~L~d~~~Gk~-vvl~f~~a~wcp~C~~~e~p~l~~~~~~~-~--~~gv~~vv~Is~d~~~~~~~ 83 (167)
T 2wfc_A 8 KLPAVTVFGATPNDKVNMAELFAGKK-GVLFAVPGAFTPGSSKTHLPGYVEQAAAI-H--GKGVDIIACMAVNDSFVMDA 83 (167)
T ss_dssp BCCCCEEESSSTTCEEEHHHHTTTSE-EEEEEESCTTCHHHHHTHHHHHHHTHHHH-H--HTTCCEEEEEESSCHHHHHH
T ss_pred cCCCcEeecCCCCcEEeHHHHhCCCc-EEEEEeCCCCCCCCCHHHHHHHHHHHHHH-H--HCCCCEEEEEeCCCHHHHHH
Confidence 47889999 999998887664 5544 555554 344 554443322221 1 1468 9999999876655
Q ss_pred --hcCCee--EEEecCH
Q 025696 148 --KVEGIA--FRFLPDP 160 (249)
Q Consensus 148 --~~~~~~--f~fVP~~ 160 (249)
++.++. |.++.|.
T Consensus 84 ~~~~~~~~~~fp~l~D~ 100 (167)
T 2wfc_A 84 WGKAHGADDKVQMLADP 100 (167)
T ss_dssp HHHHTTCTTTSEEEECT
T ss_pred HHHhcCCCcceEEEECC
Confidence 235666 8888885
No 21
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=41.41 E-value=95 Score=22.19 Aligned_cols=60 Identities=17% Similarity=0.178 Sum_probs=38.5
Q ss_pred CCCcEEEEEcCCCCeEEEeCCCCCeeEEEEeecH-----HHHHHHHHHHHHhcccccCCeEEEEEehhH
Q 025696 80 AGTAVYTVSNSSNEFVLISDPNGAKSIGLLCFRQ-----EDAEAFLAQVRLRRKELRSAAKVVPITLDQ 143 (249)
Q Consensus 80 ~~VPVF~Vtn~~g~plli~~~~g~~~v~~fF~s~-----~DAqa~L~qlk~~~P~l~~~~kV~~v~L~~ 143 (249)
...|-|.+++.+|..+..+. +|. .+...|+.. ......++++.++.++ .++.|..|+.+.
T Consensus 13 ~~~p~~~l~~~~g~~~~l~~-~gk-~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~v~v~~d~ 77 (145)
T 3erw_A 13 AVPAVFLMKTIEGEDISIPN-KGQ-KTILHFWTSWCPPCKKELPQFQSFYDAHPS--DSVKLVTVNLVN 77 (145)
T ss_dssp CSCCEEEEECTTSCEEEESC-TTS-EEEEEEECSSCHHHHHHHHHHHHHHHHCCC--SSEEEEEEECGG
T ss_pred CcCCCceeecCCCCEEeHHH-CCC-EEEEEEECCCCHHHHHHHHHHHHHHHHcCC--CCEEEEEEEccC
Confidence 34899999999999998877 554 454455421 1223345555554443 468888887764
No 22
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=38.51 E-value=25 Score=26.86 Aligned_cols=77 Identities=19% Similarity=0.179 Sum_probs=48.1
Q ss_pred CCcEEEEEcCCCCeEEEeCCCCCeeEEEEeecH---HHHHHHHHHHHHhcccccCCeEEEEEehhHHHhh----hcCCe-
Q 025696 81 GTAVYTVSNSSNEFVLISDPNGAKSIGLLCFRQ---EDAEAFLAQVRLRRKELRSAAKVVPITLDQVYML----KVEGI- 152 (249)
Q Consensus 81 ~VPVF~Vtn~~g~plli~~~~g~~~v~~fF~s~---~DAqa~L~qlk~~~P~l~~~~kV~~v~L~~vy~l----~~~~~- 152 (249)
.+|-|.++|.+|..+..+.-.|. .+...|+.. .-..+.+..+++...++ .+++|..|+.|..-.+ +..++
T Consensus 23 ~~p~f~l~~~~G~~~~l~~~~gk-~~vl~F~~~~~C~~C~~~~~~l~~l~~~~-~~~~vv~is~d~~~~~~~~~~~~~~~ 100 (167)
T 2jsy_A 23 QAPDFTVLTNSLEEKSLADMKGK-VTIISVIPSIDTGVCDAQTRRFNEEAAKL-GDVNVYTISADLPFAQARWCGANGID 100 (167)
T ss_dssp CCCCCEEEBTTCCEEEHHHHTTS-CEEEEECSCSTTSHHHHTHHHHHHHHHHH-SSCEEEEEECSSGGGTSCCGGGSSCT
T ss_pred cCCceEEECCCCCEeeHHHhCCC-eEEEEEecCCCCCchHHHHHHHHHHHHHc-CCCEEEEEECCCHHHHHHHHHhcCCC
Confidence 47889999999998887655554 344444421 23344444444433344 6799999999865444 23456
Q ss_pred eEEEecC
Q 025696 153 AFRFLPD 159 (249)
Q Consensus 153 ~f~fVP~ 159 (249)
.|.++-+
T Consensus 101 ~~~~~~d 107 (167)
T 2jsy_A 101 KVETLSD 107 (167)
T ss_dssp TEEEEEG
T ss_pred CceEeeC
Confidence 7888876
No 23
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=37.26 E-value=9.4 Score=29.69 Aligned_cols=77 Identities=16% Similarity=0.202 Sum_probs=47.5
Q ss_pred CCcEEEEEcCCCCeEEEeCCCCCeeEEEEee-------cHHHHHHHHHHHHHhcccccCCeEEEEEehhHHHhh----hc
Q 025696 81 GTAVYTVSNSSNEFVLISDPNGAKSIGLLCF-------RQEDAEAFLAQVRLRRKELRSAAKVVPITLDQVYML----KV 149 (249)
Q Consensus 81 ~VPVF~Vtn~~g~plli~~~~g~~~v~~fF~-------s~~DAqa~L~qlk~~~P~l~~~~kV~~v~L~~vy~l----~~ 149 (249)
..|=|++.|.+|..+..++-.|. .+.++|+ +..+...+.+...+ .. ..++.|..|+.|....+ ++
T Consensus 9 ~aPdF~l~~~~G~~~~l~d~~Gk-~vvl~f~~~~~c~~C~~e~~~l~~~~~~-~~--~~~~~~v~vs~d~~~~~~~~~~~ 84 (157)
T 4g2e_A 9 LAPDFELPDTELKKVKLSALKGK-VVVLAFYPAAFTQVCTKEMCTFRDSMAK-FN--QVNAVVLGISVDPPFSNKAFKEH 84 (157)
T ss_dssp BCCCCEEEBTTSCEEEGGGGTTS-CEEEEECSCTTCCC------CCSCGGGG-GG--GCSSEEEEEESSCHHHHHHHHHH
T ss_pred CCcCeEeECCCCCEEeHHHHCCC-eEEEEecCCCCCCccccchhhccccccc-cc--ccCceEeeecccchhHHHHHHHH
Confidence 47889999999999988776664 3544554 23333333222211 11 24688999998877666 34
Q ss_pred CCeeEEEecCHH
Q 025696 150 EGIAFRFLPDPA 161 (249)
Q Consensus 150 ~~~~f~fVP~~~ 161 (249)
.++.|.++-|..
T Consensus 85 ~~~~~p~l~D~~ 96 (157)
T 4g2e_A 85 NKLNFTILSDYN 96 (157)
T ss_dssp TTCCSEEEECTT
T ss_pred cCCcEEEEEcCC
Confidence 678888887754
No 24
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=36.66 E-value=77 Score=23.33 Aligned_cols=124 Identities=14% Similarity=0.034 Sum_probs=67.3
Q ss_pred CCcEEEEEcCCCCeEEEeCCCCCeeEEEEeecH-----HHHHHHHHHHHHhcccccCCeEEEEEeh---hHHHhh----h
Q 025696 81 GTAVYTVSNSSNEFVLISDPNGAKSIGLLCFRQ-----EDAEAFLAQVRLRRKELRSAAKVVPITL---DQVYML----K 148 (249)
Q Consensus 81 ~VPVF~Vtn~~g~plli~~~~g~~~v~~fF~s~-----~DAqa~L~qlk~~~P~l~~~~kV~~v~L---~~vy~l----~ 148 (249)
.+|-|.+++.+|..+....-. +.+..+|+.. ......|.++.++ . +++|..|++ +..-.+ +
T Consensus 10 ~~p~f~l~~~~g~~~~l~~~~--k~vll~f~~~~C~~C~~~~~~l~~l~~~---~--~v~~v~v~~d~~~~~~~~~~~~~ 82 (154)
T 3ia1_A 10 PLPDFLLLDPKGQPVTPATVS--KPAVIVFWASWCTVCKAEFPGLHRVAEE---T--GVPFYVISREPRDTREVVLEYMK 82 (154)
T ss_dssp ECCCCCEECTTSCEECTTTSC--SSEEEEEECTTCHHHHHHHHHHHHHHHH---H--CCCEEEEECCTTCCHHHHHHHHT
T ss_pred cCCceEEECCCCCEechHHcC--CeEEEEEEcccChhHHHHHHHHHHHHHH---c--CCeEEEEeCCCcccHHHHHHHHH
Confidence 378899999999888775543 4455555522 1122234444443 3 688888888 222222 3
Q ss_pred cCCeeEEEecCHHHHHHHHHHhhhcccCCCCCceEEeecceeeeeCCeE--EeeeeecHHHHHHHHHHHHHhcC
Q 025696 149 VEGIAFRFLPDPAQIRNALELKAADVRTGFDGVPVFQSELLVVKKKNKR--YCPVYFQKEDIEKELSKVSRASR 220 (249)
Q Consensus 149 ~~~~~f~fVP~~~qV~~A~~L~~~~g~~~f~GVPVF~~~~Lti~~~~~~--~~PlFF~keDL~~~l~k~~k~~p 220 (249)
..++.|.++-+...- ...+.+.-| ..++|-++ .+.++|+. ...=+.+.++|.+.+++..+..+
T Consensus 83 ~~~~~~~~~~d~~~~--~~~~~~~~~---v~~~P~~~----lid~~G~i~~~~~g~~~~~~l~~~l~~~~~~~~ 147 (154)
T 3ia1_A 83 TYPRFIPLLASDRDR--PHEVAARFK---VLGQPWTF----VVDREGKVVALFAGRAGREALLDALLLAGADLE 147 (154)
T ss_dssp TCTTEEECBCCSSCC--HHHHHTTSS---BCSSCEEE----EECTTSEEEEEEESBCCHHHHHHHHHHTTCCC-
T ss_pred HcCCCcccccccccc--hHHHHHHhC---CCcccEEE----EECCCCCEEEEEcCCCCHHHHHHHHHhccCccc
Confidence 456788887762111 111222111 24788633 12223321 11224689999999998866553
No 25
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=35.31 E-value=60 Score=25.19 Aligned_cols=127 Identities=15% Similarity=0.150 Sum_probs=66.2
Q ss_pred CCcEEEEEcCCCCeEEEeCCCCCeeEEEEee-------cHHHHHHHHHHHHHhcccccCCeEEEEEehhHHHhhh----c
Q 025696 81 GTAVYTVSNSSNEFVLISDPNGAKSIGLLCF-------RQEDAEAFLAQVRLRRKELRSAAKVVPITLDQVYMLK----V 149 (249)
Q Consensus 81 ~VPVF~Vtn~~g~plli~~~~g~~~v~~fF~-------s~~DAqa~L~qlk~~~P~l~~~~kV~~v~L~~vy~l~----~ 149 (249)
.+|-|.++|.+|..+..+.-.|. .+...|+ ++.+.. .|+++.++ .+++|..|+.|....++ .
T Consensus 23 ~~P~f~l~~~~G~~v~l~~~~gk-~vvl~F~~t~~C~~C~~~~~-~l~~l~~~-----~~v~vv~Is~D~~~~~~~~~~~ 95 (175)
T 1xvq_A 23 PAPAFTLTGGDLGVISSDQFRGK-SVLLNIFPSVDTPVCATSVR-TFDERAAA-----SGATVLCVSKDLPFAQKRFCGA 95 (175)
T ss_dssp BCCCCEEECTTSCEEEGGGGTTS-CEEEEECSCCCSSCCCHHHH-HHHHHHHH-----TTCEEEEEESSCHHHHTTCC--
T ss_pred cCCCeEEECCCCCEEeHHHcCCC-EEEEEEEeCCCCchHHHHHH-HHHHHHhh-----cCCEEEEEECCCHHHHHHHHHH
Confidence 47889999999998887665554 3444444 233333 33444433 56899999998766552 3
Q ss_pred CCe-eEEEecCHH-HHHHHHHHhhhcccCCCCCceEEeecceeeeeCCeEEeeee-----ecHHHHHHHHHHHHHhc
Q 025696 150 EGI-AFRFLPDPA-QIRNALELKAADVRTGFDGVPVFQSELLVVKKKNKRYCPVY-----FQKEDIEKELSKVSRAS 219 (249)
Q Consensus 150 ~~~-~f~fVP~~~-qV~~A~~L~~~~g~~~f~GVPVF~~~~Lti~~~~~~~~PlF-----F~keDL~~~l~k~~k~~ 219 (249)
.++ .|.++.|.. ++..+..+... .....|.+ .-..+.|.++|+- +=.| -+.+++++.++.+.+..
T Consensus 96 ~~~~~~~~l~D~~~~~~~~~gv~~~--~~~~~g~~--~p~~~lid~~G~I-~~~~~g~~~~~~~~~~~~l~~l~~~~ 167 (175)
T 1xvq_A 96 EGTENVMPASAFRDSFGEDYGVTIA--DGPMAGLL--ARAIVVIGADGNV-AYTELVPEIAQEPNYEAALAALGATS 167 (175)
T ss_dssp ----CEEEEECTTSSHHHHTTCBBC--SSTTTTSB--CSEEEEECTTSBE-EEEEECSBTTCCCCHHHHHHHHHHTC
T ss_pred cCCCCceEeeCCHHHHHHHhCCccc--ccccCCcc--cceEEEECCCCeE-EEEEECCCcCCCCCHHHHHHHHHhhc
Confidence 456 788888754 23222222111 01112321 1112233344432 2122 24567888888877654
No 26
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=34.52 E-value=85 Score=23.01 Aligned_cols=125 Identities=13% Similarity=0.208 Sum_probs=62.7
Q ss_pred CCcEEEEEcCCCCeEEEeCCCCCeeEEEEeecH-----HHHHHHHHHHHHhcccccCCeEEEEEehhHH--Hhh----hc
Q 025696 81 GTAVYTVSNSSNEFVLISDPNGAKSIGLLCFRQ-----EDAEAFLAQVRLRRKELRSAAKVVPITLDQV--YML----KV 149 (249)
Q Consensus 81 ~VPVF~Vtn~~g~plli~~~~g~~~v~~fF~s~-----~DAqa~L~qlk~~~P~l~~~~kV~~v~L~~v--y~l----~~ 149 (249)
.+|-|.++|.+|..+..+.-.|. .+..+|+.. ......+.++.++.++ .+++|..|+.+.- -.+ +.
T Consensus 7 ~~p~~~l~~~~g~~~~l~~~~gk-~vll~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~v~v~~d~~~~~~~~~~~~~ 83 (154)
T 3kcm_A 7 PAPDFTLNTLNGEVVKLSDLKGQ-VVIVNFWATWCPPCREEIPSMMRLNAAMAG--KPFRMLCVSIDEGGKVAVEEFFRK 83 (154)
T ss_dssp BCCCCEEECTTSCEEEGGGGTTS-EEEEEEECTTCHHHHHHHHHHHHHHHHTTT--SSEEEEEEECCTTHHHHHHHHHHH
T ss_pred CCCCeEEEcCCCCEEehhhcCCC-EEEEEEECCCCHHHHHHHHHHHHHHHHhcc--CCeEEEEEEcCCcchHHHHHHHHH
Confidence 47889999999998887665553 444444422 1223344555554443 3688888887652 111 12
Q ss_pred CCeeEEEecCHHHHHHHHHHhhhcccCCCCCce-EEeecceeeeeCCeEE----eeeeecHHHHHHHHHHHHHhcCC
Q 025696 150 EGIAFRFLPDPAQIRNALELKAADVRTGFDGVP-VFQSELLVVKKKNKRY----CPVYFQKEDIEKELSKVSRASRG 221 (249)
Q Consensus 150 ~~~~f~fVP~~~qV~~A~~L~~~~g~~~f~GVP-VF~~~~Lti~~~~~~~----~PlFF~keDL~~~l~k~~k~~p~ 221 (249)
.++.|.++-+... .+.+.-| ..|+| +|+ |.++|+.+ -..-++.+++.+.|+++....+.
T Consensus 84 ~~~~~~~~~d~~~-----~~~~~~~---v~~~P~~~l-----id~~G~i~~~~~g~~~~~~~~l~~~l~~l~~~~~~ 147 (154)
T 3kcm_A 84 TGFTLPVLLDADK-----RVGKLYG---TTGVPETFV-----IDRHGVILKKVVGAMEWDHPEVIAFLNNELSKARE 147 (154)
T ss_dssp HCCCCCEEECTTC-----HHHHHHT---CCSBCEEEE-----ECTTSBEEEEEESCCCTTSHHHHHHHHTC------
T ss_pred cCCCeeEEecCch-----HHHHHhC---CCCCCeEEE-----ECCCCcEEEEEcCCCccccHHHHHHHHHHHHHhhh
Confidence 3444555444321 1111111 34788 333 22222211 11124678999999888776543
No 27
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=33.82 E-value=26 Score=26.27 Aligned_cols=130 Identities=12% Similarity=0.024 Sum_probs=66.1
Q ss_pred CcEEEEEcCCCCeEEEeCCCCCeeEEEEee-------cHHHHHHHHHHHHHhcccc--cCCeEEEEEehhHHH----hh-
Q 025696 82 TAVYTVSNSSNEFVLISDPNGAKSIGLLCF-------RQEDAEAFLAQVRLRRKEL--RSAAKVVPITLDQVY----ML- 147 (249)
Q Consensus 82 VPVF~Vtn~~g~plli~~~~g~~~v~~fF~-------s~~DAqa~L~qlk~~~P~l--~~~~kV~~v~L~~vy----~l- 147 (249)
.|-|.++|.+|..+..+.-.|. .+...|+ ++.... .|+++.++..+. ..+++|..|+.|.-. .+
T Consensus 3 ap~f~l~~~~G~~~~l~~~~gk-~vll~f~~~~C~~~C~~~~~-~l~~l~~~~~~~~~~~~~~vv~vs~d~~~d~~~~~~ 80 (164)
T 2ggt_A 3 GGPFSLTTHTGERKTDKDYLGQ-WLLIYFGFTHCPDVCPEELE-KMIQVVDEIDSITTLPDLTPLFISIDPERDTKEAIA 80 (164)
T ss_dssp CCCCEEEETTSCEEEGGGGTTC-EEEEEEECTTCSSHHHHHHH-HHHHHHHHHHHSSSSCCEEEEEEESCTTTCCHHHHH
T ss_pred CCCeEEEeCCCCEEeHHHcCCC-EEEEEEEeCCCCchhHHHHH-HHHHHHHHHhhccCCCcEEEEEEEeCCCCCCHHHHH
Confidence 4779999999999888766654 3443443 333332 233333322210 136889999986521 12
Q ss_pred ---hcCCeeEEEecCHHHHHHHHHHhhhcccCCCCCceEEe----------e-cceeeeeCCeEE--eeeeecHHHHHHH
Q 025696 148 ---KVEGIAFRFLPDPAQIRNALELKAADVRTGFDGVPVFQ----------S-ELLVVKKKNKRY--CPVYFQKEDIEKE 211 (249)
Q Consensus 148 ---~~~~~~f~fVP~~~qV~~A~~L~~~~g~~~f~GVPVF~----------~-~~Lti~~~~~~~--~PlFF~keDL~~~ 211 (249)
+..+..|.++....+ ....+.+.-| ..++|.-- . ..+.|.++|+.+ ..-..+.++|.+.
T Consensus 81 ~~~~~~~~~~~~l~~~~d--~~~~~~~~~~---v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~ 155 (164)
T 2ggt_A 81 NYVKEFSPKLVGLTGTRE--EVDQVARAYR---VYYSPGPKDEDEDYIVDHTIIMYLIGPDGEFLDYFGQNKRKGEIAAS 155 (164)
T ss_dssp HHHHTTCSSCEEEECCHH--HHHHHHHTTT---CCEEEEEECTTSCEEEEECCEEEEECTTSCEEEEEETTCCHHHHHHH
T ss_pred HHHHHcCCCeEEEeCCHH--HHHHHHHhcC---eEEEecCCCCCCCeeEeccceEEEECCCCeEEEEeCCCCCHHHHHHH
Confidence 245667777754321 1122222111 23456211 0 122233333321 1223578889888
Q ss_pred HHHHHHh
Q 025696 212 LSKVSRA 218 (249)
Q Consensus 212 l~k~~k~ 218 (249)
++++.++
T Consensus 156 l~~ll~~ 162 (164)
T 2ggt_A 156 IATHMRP 162 (164)
T ss_dssp HHHHHGG
T ss_pred HHHHHHh
Confidence 8887654
No 28
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=33.04 E-value=84 Score=22.99 Aligned_cols=122 Identities=17% Similarity=0.229 Sum_probs=64.0
Q ss_pred CCcEEEEEcCCCCeEEEeCCCCCeeEEEEee------cHHHHHHHHHHHHHhcccccCCeEEEEEehhHHHhh-----hc
Q 025696 81 GTAVYTVSNSSNEFVLISDPNGAKSIGLLCF------RQEDAEAFLAQVRLRRKELRSAAKVVPITLDQVYML-----KV 149 (249)
Q Consensus 81 ~VPVF~Vtn~~g~plli~~~~g~~~v~~fF~------s~~DAqa~L~qlk~~~P~l~~~~kV~~v~L~~vy~l-----~~ 149 (249)
.+|-|.+++ +|..+..+.-.|. .+..+|+ ++. ....|.++.++.++ .+++|..|+.+.--+. ..
T Consensus 8 ~~P~f~l~~-~g~~~~l~~~~gk-~vll~f~~~~C~~C~~-~~~~l~~l~~~~~~--~~~~~v~v~~d~~~~~~~~~~~~ 82 (152)
T 3gl3_A 8 KAPDFALPG-KTGVVKLSDKTGS-VVYLDFWASWCGPCRQ-SFPWMNQMQAKYKA--KGFQVVAVNLDAKTGDAMKFLAQ 82 (152)
T ss_dssp BCCCCEEEB-SSSEEEGGGGTTS-EEEEEEECTTCTHHHH-HHHHHHHHHHHHGG--GTEEEEEEECCSSHHHHHHHHHH
T ss_pred cCCceEeeC-CCCeEeHHHhCCC-EEEEEEECCcCHHHHH-HHHHHHHHHHHhhc--CCeEEEEEECCCCHHHHHHHHHH
Confidence 478899999 9988877666554 4444454 222 23335555554443 3488888887632211 23
Q ss_pred CCeeEEEecCHHHHHHHHHHhhhcccCCCCCceEEeecceeeeeCCeEE---ee-eeecHHHHHHHHHHHHHhc
Q 025696 150 EGIAFRFLPDPAQIRNALELKAADVRTGFDGVPVFQSELLVVKKKNKRY---CP-VYFQKEDIEKELSKVSRAS 219 (249)
Q Consensus 150 ~~~~f~fVP~~~qV~~A~~L~~~~g~~~f~GVPVF~~~~Lti~~~~~~~---~P-lFF~keDL~~~l~k~~k~~ 219 (249)
.++.|.++-+... .+.+. =+..|+|-++ .+.++|+.+ .. .-.+.++|++.+++.....
T Consensus 83 ~~~~~~~~~d~~~-----~~~~~---~~v~~~P~~~----lid~~G~i~~~~~g~~~~~~~~l~~~i~~~~~~~ 144 (152)
T 3gl3_A 83 VPAEFTVAFDPKG-----QTPRL---YGVKGMPTSF----LIDRNGKVLLQHVGFRPADKEALEQQILAALGGN 144 (152)
T ss_dssp SCCCSEEEECTTC-----HHHHH---TTCCSSSEEE----EECTTSBEEEEEESCCTTTHHHHHHHHHHHTC--
T ss_pred cCCCCceeECCcc-----hhHHH---cCCCCCCeEE----EECCCCCEEEEEccCCCcCHHHHHHHHHHHHccc
Confidence 4555555555432 11111 1134788644 122222211 11 1135688888888876544
No 29
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=32.86 E-value=12 Score=28.50 Aligned_cols=79 Identities=18% Similarity=0.204 Sum_probs=47.1
Q ss_pred CCcEEE--EEcCCCCeEEEeCCCCCeeEEEEeec---HHHHHHHHHHHHHhccccc-CCeEEEEEehhHHHhh----hcC
Q 025696 81 GTAVYT--VSNSSNEFVLISDPNGAKSIGLLCFR---QEDAEAFLAQVRLRRKELR-SAAKVVPITLDQVYML----KVE 150 (249)
Q Consensus 81 ~VPVF~--Vtn~~g~plli~~~~g~~~v~~fF~s---~~DAqa~L~qlk~~~P~l~-~~~kV~~v~L~~vy~l----~~~ 150 (249)
.+|-|. ++|.+|..+..+.-.|. .+..+|+. -......+..+++...++. .+++|..|+.|..-.+ +..
T Consensus 12 ~~P~f~~~l~~~~G~~~~l~~~~gk-~~vl~F~~~~~c~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~ 90 (163)
T 3gkn_A 12 PAATFDLPLSLSGGTQTTLRAHAGH-WLVIYFYPKDSTPGATTEGLDFNALLPEFDKAGAKILGVSRDSVKSHDNFCAKQ 90 (163)
T ss_dssp CGGGGGCCEECSTTCEECSGGGTTS-CEEEEECSCTTSHHHHHHHHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHH
T ss_pred cCCCccccccCCCCCEEEHHHhCCC-cEEEEEeCCCCCCcHHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHh
Confidence 478889 99999998887665564 44445542 1122333333333222222 4689999999855544 234
Q ss_pred CeeEEEecCH
Q 025696 151 GIAFRFLPDP 160 (249)
Q Consensus 151 ~~~f~fVP~~ 160 (249)
++.|.++-+.
T Consensus 91 ~~~~~~~~d~ 100 (163)
T 3gkn_A 91 GFAFPLVSDG 100 (163)
T ss_dssp CCSSCEEECT
T ss_pred CCCceEEECC
Confidence 6777777664
No 30
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=32.38 E-value=24 Score=25.87 Aligned_cols=49 Identities=16% Similarity=0.203 Sum_probs=33.6
Q ss_pred HHHhhc-----CCCcEEEEEcCCCCeEEEeCCCCCeeEEEEeecHHHHHHHHHHHH
Q 025696 74 FVSKTL-----AGTAVYTVSNSSNEFVLISDPNGAKSIGLLCFRQEDAEAFLAQVR 124 (249)
Q Consensus 74 ~i~ekL-----~~VPVF~Vtn~~g~plli~~~~g~~~v~~fF~s~~DAqa~L~qlk 124 (249)
++.+++ .++|.+++-|.+|..+..... |. ....-+++.++.+++|+++.
T Consensus 79 ~l~~~~~v~~~~~~Pt~~~~d~~G~~~~~~~g-~~-~~~~~~~~~~~l~~~l~~l~ 132 (133)
T 3fk8_A 79 ELSQAYGDPIQDGIPAVVVVNSDGKVRYTTKG-GE-LANARKMSDQGIYDFFAKIT 132 (133)
T ss_dssp HHHHHTTCGGGGCSSEEEEECTTSCEEEECCS-CT-TTTGGGSCHHHHHHHHHHHH
T ss_pred HHHHHhCCccCCccceEEEECCCCCEEEEecC-Cc-ccccccCCHHHHHHHHHHhc
Confidence 455555 579999999999987765332 11 11123678899999998875
No 31
>3mng_A Peroxiredoxin-5, mitochondrial; peroxidase, PRXV, substrate analog, DTT, oxidoreductase; 1.45A {Homo sapiens} SCOP: c.47.1.10 PDB: 2vl3_A 1oc3_A 2vl2_A 2vl9_A 1urm_A 1hd2_A 1h4o_A
Probab=32.33 E-value=35 Score=27.24 Aligned_cols=77 Identities=18% Similarity=0.271 Sum_probs=48.8
Q ss_pred CCcEEEEE-cCCCCeEEEeC-CCCCeeEEEEee-------cH-HHHHHHHHHHHHhcccccCCeEEEE-EehhHHHhhh-
Q 025696 81 GTAVYTVS-NSSNEFVLISD-PNGAKSIGLLCF-------RQ-EDAEAFLAQVRLRRKELRSAAKVVP-ITLDQVYMLK- 148 (249)
Q Consensus 81 ~VPVF~Vt-n~~g~plli~~-~~g~~~v~~fF~-------s~-~DAqa~L~qlk~~~P~l~~~~kV~~-v~L~~vy~l~- 148 (249)
..|-|++. +.+|+.+..++ -.|.. +.++|+ +. +++-.+.+...+- . ..++.|.. ++.+....++
T Consensus 20 ~aPdf~l~~~~~g~~v~L~d~~~gk~-vvL~f~pa~wcp~C~~~e~p~l~~~~~~~-~--~~gv~vv~~iS~D~~~~~~~ 95 (173)
T 3mng_A 20 AIPAVEVFEGEPGNKVNLAELFKGKK-GVLFGVPGAFTPGCSKTHLPGFVEQAEAL-K--AKGVQVVACLSVNDAFVTGE 95 (173)
T ss_dssp BCCCCEEECSSTTCEEEHHHHTTTSE-EEEEECSCTTCHHHHHTHHHHHHHTHHHH-H--TTTCCEEEEEESSCHHHHHH
T ss_pred CCCCeEeeeCCCCCEEEhHHHhCCCc-EEEEEEeCCCCCCCCHHHHHHHHHHHHHH-H--hCCCEEEEEEcCCCHHHHHH
Confidence 36888998 89999888766 35543 544554 45 4555544332221 1 14578885 9999877663
Q ss_pred ---cCCee--EEEecCHH
Q 025696 149 ---VEGIA--FRFLPDPA 161 (249)
Q Consensus 149 ---~~~~~--f~fVP~~~ 161 (249)
+.++. |.++-|..
T Consensus 96 f~~~~~~~~~fp~l~D~~ 113 (173)
T 3mng_A 96 WGRAHKAEGKVRLLADPT 113 (173)
T ss_dssp HHHHTTCTTTCEEEECTT
T ss_pred HHHHhCCCCceEEEECCC
Confidence 35665 88998864
No 32
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=32.09 E-value=58 Score=25.99 Aligned_cols=76 Identities=9% Similarity=-0.088 Sum_probs=43.4
Q ss_pred CcEEEEEcCCCCeEEEeCCCCCeeEEEEee-------cHHHHHHHHHHHHHhcc-cccCCeEEEEEehhH----HHhh--
Q 025696 82 TAVYTVSNSSNEFVLISDPNGAKSIGLLCF-------RQEDAEAFLAQVRLRRK-ELRSAAKVVPITLDQ----VYML-- 147 (249)
Q Consensus 82 VPVF~Vtn~~g~plli~~~~g~~~v~~fF~-------s~~DAqa~L~qlk~~~P-~l~~~~kV~~v~L~~----vy~l-- 147 (249)
.|-|.++|.+|..+..+.-.|. .+..+|. ++.+... |+++.++-. +.+.+++|..|+.|. .-.+
T Consensus 21 ~p~f~l~d~~G~~v~l~~~~Gk-~vlv~F~at~C~~vC~~~~~~-l~~l~~~~~~~~~~~v~vv~Is~D~~~d~~~~~~~ 98 (200)
T 2b7k_A 21 GGPFHLEDMYGNEFTEKNLLGK-FSIIYFGFSNCPDICPDELDK-LGLWLNTLSSKYGITLQPLFITCDPARDSPAVLKE 98 (200)
T ss_dssp CCCCEEEETTSCEEEGGGGTTS-CEEEEEECTTCCSHHHHHHHH-HHHHHHHHHHHHCCCCEEEEEESCTTTCCHHHHHH
T ss_pred CCCEEEEcCCCCEEeHHHcCCC-EEEEEEECCCCcchhHHHHHH-HHHHHHHHHHhhCCceEEEEEECCCCCCCHHHHHH
Confidence 4889999999999888766654 3433333 3333322 233222111 123478999999873 2222
Q ss_pred --hcCCeeEEEecC
Q 025696 148 --KVEGIAFRFLPD 159 (249)
Q Consensus 148 --~~~~~~f~fVP~ 159 (249)
+..+..|.+++.
T Consensus 99 ~~~~~~~~~~~l~~ 112 (200)
T 2b7k_A 99 YLSDFHPSILGLTG 112 (200)
T ss_dssp HHTTSCTTCEEEEC
T ss_pred HHHHcCCCceEEeC
Confidence 234566777765
No 33
>3bid_A UPF0339 protein NMB1088; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.70A {Neisseria meningitidis MC58} SCOP: d.348.1.1
Probab=30.16 E-value=72 Score=22.04 Aligned_cols=40 Identities=5% Similarity=0.135 Sum_probs=28.1
Q ss_pred CCcEEEEEcCCCCeEEEeCCCCCeeEEEEeecHHHHHHHHHHHHHhccc
Q 025696 81 GTAVYTVSNSSNEFVLISDPNGAKSIGLLCFRQEDAEAFLAQVRLRRKE 129 (249)
Q Consensus 81 ~VPVF~Vtn~~g~plli~~~~g~~~v~~fF~s~~DAqa~L~qlk~~~P~ 129 (249)
|-.-|-+..++|+.++ +.+ .|-++.+|+.-++.+|++-|+
T Consensus 11 G~frfrLka~NGevI~-sSe--------~Y~sk~~a~~gI~sVk~na~~ 50 (64)
T 3bid_A 11 GEYRWRLKAANHEIIA-QGE--------GYTSKQNCQHAVDLLKSTTAA 50 (64)
T ss_dssp SCEEEEEECTTSCEEE-ECC--------CBSCHHHHHHHHHHHHTCCTT
T ss_pred CCEEEEEEeCCCCEEE-ECC--------CcCCHHHHHHHHHHHHHhCCC
Confidence 4445566666666555 222 488999999999999997664
No 34
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=29.98 E-value=50 Score=25.66 Aligned_cols=133 Identities=14% Similarity=0.050 Sum_probs=68.5
Q ss_pred CCc-EEEEEcCCCCeEEEeCCCCCeeEEEEee-------cHHHHHHHHHHHHHhcccccCCeEEEEEehhH---HHhh--
Q 025696 81 GTA-VYTVSNSSNEFVLISDPNGAKSIGLLCF-------RQEDAEAFLAQVRLRRKELRSAAKVVPITLDQ---VYML-- 147 (249)
Q Consensus 81 ~VP-VF~Vtn~~g~plli~~~~g~~~v~~fF~-------s~~DAqa~L~qlk~~~P~l~~~~kV~~v~L~~---vy~l-- 147 (249)
.+| -|.++|.+|..+..+.-.|. .+...|+ +..+.. .|+++.++..+.+.+++|..|+++- .-.+
T Consensus 6 ~~P~~f~l~d~~G~~v~l~~~~Gk-~vll~F~~t~C~~~C~~~~~-~l~~~~~~~~~~~~~~~vv~is~d~~d~~~~~~~ 83 (170)
T 3me7_A 6 YVPGDITLVDSYGNEFQLKNLKGK-PIILSPIYTHCRAACPLITK-SLLKVIPKLGTPGKDFWVITFTFDPKDTLEDIKR 83 (170)
T ss_dssp BCCTTCEEEETTCCEEEGGGGTTS-CEEEEEECTTCCSHHHHHHH-HHHTTHHHHCCBTTTBEEEEEECCTTCCHHHHHH
T ss_pred cCCCCeEEEcCCcCEEchHHhCCC-EEEEEEECCCCCchhHHHHH-HHHHHHHHhhhcCCceEEEEEECCCCCCHHHHHH
Confidence 478 89999999999888765554 3443443 222222 2333333322224568999999872 1111
Q ss_pred --hcCC---eeEEE--ecCHHHHHHHHHHhhhcc--c-CCCCCceEEeecceeeeeCCe---EEeeeeecHHHHHHHHHH
Q 025696 148 --KVEG---IAFRF--LPDPAQIRNALELKAADV--R-TGFDGVPVFQSELLVVKKKNK---RYCPVYFQKEDIEKELSK 214 (249)
Q Consensus 148 --~~~~---~~f~f--VP~~~qV~~A~~L~~~~g--~-~~f~GVPVF~~~~Lti~~~~~---~~~PlFF~keDL~~~l~k 214 (249)
+..+ ..|.| ..+..++....+-..-.. . ..+...|.++ .|..+|+ .+...-++.+++.+.|++
T Consensus 84 ~~~~~~~~~~~w~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~----lID~~G~i~~~~~g~~~~~~~i~~~l~~ 159 (170)
T 3me7_A 84 FQKEYGIDGKGWKVVKAKTSEDLFKLLDAIDFRFMTAGNDFIHPNVVV----VLSPELQIKDYIYGVNYNYLEFVNALRL 159 (170)
T ss_dssp HHHHTTCCSSSEEEEEESSHHHHHHHHHHTTCCCEEETTEEECCCEEE----EECTTSBEEEEEESSSCCHHHHHHHHHH
T ss_pred HHHHcCCCCCCeEEEeCCCHHHHHHHHHHCCeEEecCCCccccCceEE----EECCCCeEEEEEeCCCCCHHHHHHHHHH
Confidence 1222 34444 466666654332211000 0 1122344222 1223332 134445678999999998
Q ss_pred HHHhc
Q 025696 215 VSRAS 219 (249)
Q Consensus 215 ~~k~~ 219 (249)
+....
T Consensus 160 ~~~~~ 164 (170)
T 3me7_A 160 ARGEG 164 (170)
T ss_dssp HTTCS
T ss_pred hhccc
Confidence 86644
No 35
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=29.50 E-value=99 Score=23.89 Aligned_cols=58 Identities=10% Similarity=0.064 Sum_probs=36.2
Q ss_pred CCcEEEEEcCCCCeEEEeCCCCCeeEEEEee------cHHHHHHHHHHHHHhcccccCCeEEEEEehh
Q 025696 81 GTAVYTVSNSSNEFVLISDPNGAKSIGLLCF------RQEDAEAFLAQVRLRRKELRSAAKVVPITLD 142 (249)
Q Consensus 81 ~VPVF~Vtn~~g~plli~~~~g~~~v~~fF~------s~~DAqa~L~qlk~~~P~l~~~~kV~~v~L~ 142 (249)
.+|=|.++|.+|..+..+.-.|. .+..+|. ++.+.. .|+++.++..+ .++.|..|+.+
T Consensus 17 ~~p~f~l~d~~G~~v~l~~~~Gk-~vlv~F~atwC~~C~~~~p-~l~~l~~~~~~--~~~~vi~is~d 80 (180)
T 3kij_A 17 SFYAFEVKDAKGRTVSLEKYKGK-VSLVVNVASDCQLTDRNYL-GLKELHKEFGP--SHFSVLAFPCN 80 (180)
T ss_dssp CGGGCEEEBTTSCEEEGGGGTTS-EEEEEEECSSSTTHHHHHH-HHHHHHHHHTT--TSEEEEEEECC
T ss_pred cccceEEecCCCCEecHHHcCCC-EEEEEEEecCCCCcHHHHH-HHHHHHHHhcc--CCeEEEEEECC
Confidence 57889999999999888766664 3433333 444443 34455544332 35888888754
No 36
>3keb_A Probable thiol peroxidase; structural genomics, APC40679, PSI-2, Pro structure initiative; HET: MSE; 1.80A {Chromobacterium violaceum}
Probab=29.33 E-value=37 Score=28.94 Aligned_cols=124 Identities=12% Similarity=0.170 Sum_probs=72.3
Q ss_pred CCcEEEEEcCCCCeEEEeCCCCCeeEEEEee-------cH-----HHHHHHHHHHHHhcccccCCeEEEEEehhHHHhhh
Q 025696 81 GTAVYTVSNSSNEFVLISDPNGAKSIGLLCF-------RQ-----EDAEAFLAQVRLRRKELRSAAKVVPITLDQVYMLK 148 (249)
Q Consensus 81 ~VPVF~Vtn~~g~plli~~~~g~~~v~~fF~-------s~-----~DAqa~L~qlk~~~P~l~~~~kV~~v~L~~vy~l~ 148 (249)
..|-|++.|.+|..+..++-.|.. +.++|+ +. .++. .+.+. . .++.|..|+.|....++
T Consensus 27 ~APdFtL~d~~G~~vsLsd~~Gk~-vVL~F~ps~~cp~C~~~~~~~El~----~~~~~---~-~gv~VvgIS~Ds~~~~~ 97 (224)
T 3keb_A 27 YLPSFMLVDDQKHDAALESFSHTP-KLIVTLLSVDEDEHAGLLLLRETR----RFLDS---W-PHLKLIVITVDSPSSLA 97 (224)
T ss_dssp BCCCCEEEETTSCEEEGGGGTTCC-EEEEECSCTTCSTTTSHHHHHHHH----HHHTT---C-TTSEEEEEESSCHHHHH
T ss_pred CCCCeEEECCCCCEEeHHHhCCCc-EEEEEEeCCCCCCCCCCccHHHHH----HHHHH---c-CCCEEEEEECCCHHHHH
Confidence 478999999999998887665643 444554 22 3333 33332 2 57899999999887763
Q ss_pred ----cCCe-eEEEecCH--HHHHHHHHHhhhcccCCCCC--ceEEeecceeeeeCCe-E---Eeeee---ecHHHHHHHH
Q 025696 149 ----VEGI-AFRFLPDP--AQIRNALELKAADVRTGFDG--VPVFQSELLVVKKKNK-R---YCPVY---FQKEDIEKEL 212 (249)
Q Consensus 149 ----~~~~-~f~fVP~~--~qV~~A~~L~~~~g~~~f~G--VPVF~~~~Lti~~~~~-~---~~PlF---F~keDL~~~l 212 (249)
..++ .|.++.|. .++..+..+.... ..+.| +|- .+.|.++|+ + +.+-. -+.+++.+.|
T Consensus 98 ~f~~~~gl~~fplLsD~~~~~vak~yGv~~~~--~~~~G~~~p~----tfvID~dG~I~~~~~~~~~~~~pd~~evl~~L 171 (224)
T 3keb_A 98 RARHEHGLPNIALLSTLRGRDFHKRYGVLITE--YPLSGYTSPA----IILADAANVVHYSERLANTRDFFDFDAIEKLL 171 (224)
T ss_dssp HHHHHHCCTTCEEEESTTCTTHHHHTTCBCCS--TTSTTCBCCE----EEEECTTCBEEEEEECSBTTCCCCHHHHHHHH
T ss_pred HHHHHcCCCCceEEEcCCchHHHHHhCCcccc--ccccCCccCE----EEEEcCCCEEEEEEecCCCCCCCCHHHHHHHH
Confidence 4567 69999996 3554444333211 11234 232 122222222 1 11222 3478888888
Q ss_pred HHHHHhc
Q 025696 213 SKVSRAS 219 (249)
Q Consensus 213 ~k~~k~~ 219 (249)
.++.++.
T Consensus 172 ~~l~~~~ 178 (224)
T 3keb_A 172 QEGEQQA 178 (224)
T ss_dssp HHHHHHC
T ss_pred HHhhhcc
Confidence 8887654
No 37
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=29.23 E-value=51 Score=24.87 Aligned_cols=75 Identities=15% Similarity=-0.002 Sum_probs=42.4
Q ss_pred cEEEEEcCCCCeEEEeCCCCCeeEEEEee-------cHHHHHHHHHHHHHhccc--ccCCeEEEEEehhHH----Hhh--
Q 025696 83 AVYTVSNSSNEFVLISDPNGAKSIGLLCF-------RQEDAEAFLAQVRLRRKE--LRSAAKVVPITLDQV----YML-- 147 (249)
Q Consensus 83 PVF~Vtn~~g~plli~~~~g~~~v~~fF~-------s~~DAqa~L~qlk~~~P~--l~~~~kV~~v~L~~v----y~l-- 147 (249)
|-|.++|.+|..+..+.-.|. .+..+|. ++.... .|+++.++..+ ...+++|..|+.+.. -.+
T Consensus 7 p~f~l~~~~G~~~~l~~~~gk-~vll~F~~~~C~~~C~~~~~-~l~~l~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~ 84 (171)
T 2rli_A 7 GDFHLLDHRGRARCKADFRGQ-WVLMYFGFTHCPDICPDELE-KLVQVVRQLEAEPGLPPVQPVFITVDPERDDVEAMAR 84 (171)
T ss_dssp SCCEEEETTSCEEETTTTTTS-EEEEEEECTTCSSSHHHHHH-HHHHHHHHHHHSTTSCCEEEEEEESCSTTCCHHHHHH
T ss_pred CCeEEEeCCCCEEeHHHhCCC-EEEEEEEcCCCCchhHHHHH-HHHHHHHHHhhccCCCceEEEEEEECCCCCCHHHHHH
Confidence 779999999999888766664 3433333 333332 33333332221 124688999988731 111
Q ss_pred --hcCCeeEEEecC
Q 025696 148 --KVEGIAFRFLPD 159 (249)
Q Consensus 148 --~~~~~~f~fVP~ 159 (249)
+..+..|.++.+
T Consensus 85 ~~~~~~~~~~~l~~ 98 (171)
T 2rli_A 85 YVQDFHPRLLGLTG 98 (171)
T ss_dssp HHHTTCTTCCEEEC
T ss_pred HHHHcCCCeEEEeC
Confidence 234556666654
No 38
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=28.43 E-value=48 Score=25.09 Aligned_cols=60 Identities=12% Similarity=0.147 Sum_probs=36.4
Q ss_pred CCcEEEEEcCCCCeEEEeCCCCCeeEEEEee-------cHHHHHHHHHHHHHhcccccCCeEEEEEehh
Q 025696 81 GTAVYTVSNSSNEFVLISDPNGAKSIGLLCF-------RQEDAEAFLAQVRLRRKELRSAAKVVPITLD 142 (249)
Q Consensus 81 ~VPVF~Vtn~~g~plli~~~~g~~~v~~fF~-------s~~DAqa~L~qlk~~~P~l~~~~kV~~v~L~ 142 (249)
.+|-|.++|.+|..+..+.-.|. .+...|+ ++... ..|.++.++..+.+.+++|..|+.+
T Consensus 12 ~~p~f~l~~~~G~~~~l~~~~gk-~vll~f~~~~C~~~C~~~~-~~l~~l~~~~~~~~~~~~vv~is~d 78 (174)
T 1xzo_A 12 EVEPFTFQNQDGKNVSLESLKGE-VWLADFIFTNCETICPPMT-AHMTDLQKKLKAENIDVRIISFSVD 78 (174)
T ss_dssp ECCCCEEECTTSCEEETGGGTTC-CEEEEEECSCCSSCCCSHH-HHHHHHHHHHHHTTCCCEEEEEESC
T ss_pred ccCCcEEEcCCCCEEehhhcCCC-EEEEEEEcCCCcchhHHHH-HHHHHHHHHhhhcCCcEEEEEEEeC
Confidence 37889999999999887665554 3433333 22222 2344444433332235899999986
No 39
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=26.53 E-value=15 Score=29.08 Aligned_cols=75 Identities=15% Similarity=0.150 Sum_probs=46.8
Q ss_pred CcEEEEEcCCCCeEEEeCCCCCeeEEEEee-------cHHHHHHHHHHHHHhcccccCCeEEEEEehhHHHhh----hcC
Q 025696 82 TAVYTVSNSSNEFVLISDPNGAKSIGLLCF-------RQEDAEAFLAQVRLRRKELRSAAKVVPITLDQVYML----KVE 150 (249)
Q Consensus 82 VPVF~Vtn~~g~plli~~~~g~~~v~~fF~-------s~~DAqa~L~qlk~~~P~l~~~~kV~~v~L~~vy~l----~~~ 150 (249)
+|=|.++|.+|..+..++-.|. .+.++|+ +..+... |+++.++.. ..++.|..|+.|....+ ++.
T Consensus 31 aP~f~l~~~~G~~v~l~d~~Gk-~vvl~f~~~~~c~~C~~el~~-l~~l~~~~~--~~~~~vv~Vs~D~~~~~~~~~~~~ 106 (179)
T 3ixr_A 31 LLNHPLMLSGSTCKTLSDYTNQ-WLVLYFYPKDNTPGSSTEGLE-FNLLLPQFE--QINATVLGVSRDSVKSHDSFCAKQ 106 (179)
T ss_dssp HHHCCEEEGGGEEECGGGGTTS-EEEEEECSCTTSHHHHHHHHH-HHHHHHHHH--TTTEEEEEEESCCHHHHHHHHHHH
T ss_pred CCCeeEECCCCCEEeHHHHCCC-CEEEEEEcCCCCCchHHHHHH-HHHHHHHHH--HCCCEEEEEcCCCHHHHHHHHHHc
Confidence 5778889999988877666664 4545554 3333332 233333222 24688999999876555 235
Q ss_pred CeeEEEecCH
Q 025696 151 GIAFRFLPDP 160 (249)
Q Consensus 151 ~~~f~fVP~~ 160 (249)
++.|.++.|.
T Consensus 107 ~~~f~~l~D~ 116 (179)
T 3ixr_A 107 GFTFPLVSDS 116 (179)
T ss_dssp TCCSCEEECT
T ss_pred CCceEEEECC
Confidence 6778888764
No 40
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=26.08 E-value=88 Score=22.87 Aligned_cols=124 Identities=10% Similarity=0.152 Sum_probs=64.3
Q ss_pred CCc-EEEEEcCCCCeEEEeCCCCCeeEEEEee------cHHHHHHHHHHHHHhcccccCCeEEEEEehhHHH----hh-h
Q 025696 81 GTA-VYTVSNSSNEFVLISDPNGAKSIGLLCF------RQEDAEAFLAQVRLRRKELRSAAKVVPITLDQVY----ML-K 148 (249)
Q Consensus 81 ~VP-VF~Vtn~~g~plli~~~~g~~~v~~fF~------s~~DAqa~L~qlk~~~P~l~~~~kV~~v~L~~vy----~l-~ 148 (249)
..| -|.+++.+|..+..+.-.|. .+..+|+ ++.. ...++++.++.++ .+++|..|+.+.-- +. +
T Consensus 8 ~~p~~f~l~~~~g~~~~l~~~~gk-~~lv~f~~~~C~~C~~~-~~~l~~l~~~~~~--~~~~~v~v~~d~~~~~~~~~~~ 83 (152)
T 2lja_A 8 PSAASFSYPDINGKTVSLADLKGK-YIYIDVWATWCGPCRGE-LPALKELEEKYAG--KDIHFVSLSCDKNKKAWENMVT 83 (152)
T ss_dssp CCSSSCEEEETTTEEEESTTTTTS-EEEEEECCSSCCGGGGT-HHHHHHHHHHSTT--SSEEEEEEECCSCHHHHHHHHH
T ss_pred CCCcccEeecCCCCEeeHHHcCCC-EEEEEEECCcCHhHHHH-hHHHHHHHHHhcc--CCeEEEEEEccCcHHHHHHHHH
Confidence 367 89999999998887665553 4444444 2332 3345555554443 45888888765421 11 1
Q ss_pred cCCee-EEEecCHHHHHHHHHHhhhcccCCCCCceEEeecceeeeeCCeEEe--eeeecHHHHHHHHHHHHHhcC
Q 025696 149 VEGIA-FRFLPDPAQIRNALELKAADVRTGFDGVPVFQSELLVVKKKNKRYC--PVYFQKEDIEKELSKVSRASR 220 (249)
Q Consensus 149 ~~~~~-f~fVP~~~qV~~A~~L~~~~g~~~f~GVPVF~~~~Lti~~~~~~~~--PlFF~keDL~~~l~k~~k~~p 220 (249)
..++. +.+.-+.. - .+.+. =+..|+|-++ .+.++|+.+- .=+.+.++|.+.|+++...++
T Consensus 84 ~~~~~~~~~~~d~~-~----~~~~~---~~v~~~P~~~----lid~~G~i~~~~~g~~~~~~l~~~l~~~~~~~~ 146 (152)
T 2lja_A 84 KDQLKGIQLHMGTD-R----TFMDA---YLINGIPRFI----LLDRDGKIISANMTRPSDPKTAEKFNELLGLEG 146 (152)
T ss_dssp HHTCCSEEEECSSC-T----HHHHH---TTCCSSCCEE----EECTTSCEEESSCCCTTCHHHHHHHHHHHTCCS
T ss_pred hcCCCCceeecCcc-h----hHHHH---cCcCCCCEEE----EECCCCeEEEccCCCCCHHHHHHHHHHHhcccc
Confidence 11221 22222221 0 11111 1134788654 1222222111 114688999999999877664
No 41
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=24.54 E-value=1.1e+02 Score=22.33 Aligned_cols=60 Identities=17% Similarity=0.001 Sum_probs=36.7
Q ss_pred CCcEEEEEcCCCCeEEEeCCCCCeeEEEEee------cHHHHHHHHHH---HHHhcccccCCeEEEEEehhHH
Q 025696 81 GTAVYTVSNSSNEFVLISDPNGAKSIGLLCF------RQEDAEAFLAQ---VRLRRKELRSAAKVVPITLDQV 144 (249)
Q Consensus 81 ~VPVF~Vtn~~g~plli~~~~g~~~v~~fF~------s~~DAqa~L~q---lk~~~P~l~~~~kV~~v~L~~v 144 (249)
..|-|.+++.+|..+..+.-.| +.+...|. ++.+... |.+ +.++..+ .++.|..|+.+.-
T Consensus 10 ~ap~f~l~~~~g~~~~l~~~~g-k~vll~F~a~wC~~C~~~~~~-l~~~~~l~~~~~~--~~~~vi~i~~d~~ 78 (142)
T 3eur_A 10 KALNFTYTLDSGVKGTLYQFPA-EYTLLFINNPGCHACAEMIEG-LKASPVINGFTAA--KKLKVLSIYPDEE 78 (142)
T ss_dssp BCCCCEEEETTSCEEETTTCCC-SEEEEEECCSSSHHHHHHHHH-HHHCHHHHHHHHT--TSEEEEEEECSSC
T ss_pred ccCCcEEEcCCCCEeeHHHcCC-CEEEEEEECCCCccHHHHHHH-HhhhHHHHHHhcc--CCeEEEEEEcCCC
Confidence 4788999999999988766665 44544444 2333322 333 3333222 4688888888654
No 42
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=23.94 E-value=1.2e+02 Score=21.33 Aligned_cols=118 Identities=14% Similarity=0.124 Sum_probs=61.5
Q ss_pred CCcEEEEEcCCCCeEEEeCCCCCeeEEEEeecH-----HHHHHHHHHHHHhcccccCCeEEEEEehhH----HHhh-hcC
Q 025696 81 GTAVYTVSNSSNEFVLISDPNGAKSIGLLCFRQ-----EDAEAFLAQVRLRRKELRSAAKVVPITLDQ----VYML-KVE 150 (249)
Q Consensus 81 ~VPVF~Vtn~~g~plli~~~~g~~~v~~fF~s~-----~DAqa~L~qlk~~~P~l~~~~kV~~v~L~~----vy~l-~~~ 150 (249)
..|-|.++|.+|..+....-.|. .+...|... ......++++.++.+ ++++..|+.+. +-+. +..
T Consensus 3 ~~p~~~l~~~~g~~~~l~~~~~k-~~lv~f~~~~C~~C~~~~~~l~~~~~~~~----~~~~~~v~~~~~~~~~~~~~~~~ 77 (136)
T 1lu4_A 3 ERLQFTATTLSGAPFDGASLQGK-PAVLWFWTPWCPFCNAEAPSLSQVAAANP----AVTFVGIATRADVGAMQSFVSKY 77 (136)
T ss_dssp GGGCCEEEBTTSCEEEGGGGTTS-CEEEEEECTTCHHHHHHHHHHHHHHHHCT----TSEEEEEECSSCHHHHHHHHHHH
T ss_pred CCCCeEeecCCCCeecHHHhCCC-EEEEEEECCcChhHHHHHHHHHHHHHHCC----CcEEEEEEcCCCHHHHHHHHHHc
Confidence 46889999999998887665553 454455532 122334445555433 68888888753 1111 223
Q ss_pred CeeEEEecCHHHHHHHHHHhhhcccCCCCCceEEeecceeeeeCCeEE-ee---eeecHHHHHHHHHHH
Q 025696 151 GIAFRFLPDPAQIRNALELKAADVRTGFDGVPVFQSELLVVKKKNKRY-CP---VYFQKEDIEKELSKV 215 (249)
Q Consensus 151 ~~~f~fVP~~~qV~~A~~L~~~~g~~~f~GVPVF~~~~Lti~~~~~~~-~P---lFF~keDL~~~l~k~ 215 (249)
++.|.++-+... + +.+. -+..|+|-++ .+.++|+.+ .. =+.+.+++.+.++++
T Consensus 78 ~~~~~~~~d~~~-~----~~~~---~~i~~~P~~~----lid~~G~i~~~~~~~g~~~~~~l~~~l~~l 134 (136)
T 1lu4_A 78 NLNFTNLNDADG-V----IWAR---YNVPWQPAFV----FYRADGTSTFVNNPTAAMSQDELSGRVAAL 134 (136)
T ss_dssp TCCSEEEECTTS-H----HHHH---TTCCSSSEEE----EECTTSCEEEECCSSSCCCHHHHHHHHHHC
T ss_pred CCCceEEECCch-h----HHHh---cCCCCCCEEE----EECCCCcEEEEEcCCCccCHHHHHHHHHHH
Confidence 444554444211 1 1111 1135788654 122233322 11 134688888888764
No 43
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=23.77 E-value=1.6e+02 Score=21.88 Aligned_cols=78 Identities=13% Similarity=0.193 Sum_probs=48.9
Q ss_pred CCCcEEEEEcCCCCeEEEeCCCCCeeEEEEeecH-----HHHHHHHHHHHHhcccccCCeEEEEEehhHHHhh--hcCCe
Q 025696 80 AGTAVYTVSNSSNEFVLISDPNGAKSIGLLCFRQ-----EDAEAFLAQVRLRRKELRSAAKVVPITLDQVYML--KVEGI 152 (249)
Q Consensus 80 ~~VPVF~Vtn~~g~plli~~~~g~~~v~~fF~s~-----~DAqa~L~qlk~~~P~l~~~~kV~~v~L~~vy~l--~~~~~ 152 (249)
..+|-|.+++.+|..+..+.-.|. .+...|+.. ......|.++.++.++ .++.|..|+.+..++- +..++
T Consensus 19 ~~~p~f~l~~~~g~~~~l~~~~gk-~vll~F~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~v~v~~d~~~~~~~~~~~~ 95 (158)
T 3hdc_A 19 ALAPNFKLPTLSGENKSLAQYRGK-IVLVNFWASWCPYCRDEMPSMDRLVKSFPK--GDLVVLAVNVEKRFPEKYRRAPV 95 (158)
T ss_dssp SBCCCCEEECTTSCEEESGGGTTS-EEEEEEECTTCHHHHHHHHHHHHHHHHSST--TSEEEEEEECSSSCCGGGGGCCC
T ss_pred CcCCCceeEcCCCCEEehHHhCCC-EEEEEEECCcCHHHHHHHHHHHHHHHHccc--CCeEEEEEeCCHHHHHHHHHcCC
Confidence 357889999999999888766554 454455421 1223345555554443 5688999998873322 34566
Q ss_pred eEEEecCH
Q 025696 153 AFRFLPDP 160 (249)
Q Consensus 153 ~f~fVP~~ 160 (249)
.|.++-+.
T Consensus 96 ~~~~~~d~ 103 (158)
T 3hdc_A 96 SFNFLSDA 103 (158)
T ss_dssp SCEEEECT
T ss_pred CceEEECc
Confidence 77777665
No 44
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=23.61 E-value=1.5e+02 Score=21.70 Aligned_cols=123 Identities=12% Similarity=0.208 Sum_probs=62.6
Q ss_pred CcEEEEEcCCCCeEEEeCCCCCeeEEEEeecH-----HHHHHHHHHHHHhcccccCCeEEEEEehhHH----Hhh-hcCC
Q 025696 82 TAVYTVSNSSNEFVLISDPNGAKSIGLLCFRQ-----EDAEAFLAQVRLRRKELRSAAKVVPITLDQV----YML-KVEG 151 (249)
Q Consensus 82 VPVF~Vtn~~g~plli~~~~g~~~v~~fF~s~-----~DAqa~L~qlk~~~P~l~~~~kV~~v~L~~v----y~l-~~~~ 151 (249)
.|-|.+++.+|..+..+.-.|. .+...|+.. ......|.++.++.++ .+++|..|+.+.- -+. +..+
T Consensus 6 ~p~~~l~~~~g~~~~l~~~~gk-~vlv~F~~~~C~~C~~~~~~l~~~~~~~~~--~~v~vv~v~~d~~~~~~~~~~~~~~ 82 (151)
T 2f9s_A 6 APNFVLEDTNGKRIELSDLKGK-GVFLNFWGTWCEPCKKEFPYMANQYKHFKS--QGVEIVAVNVGESKIAVHNFMKSYG 82 (151)
T ss_dssp CCCCEEECTTCCEEEGGGGTTS-EEEEEEECTTCHHHHHHHHHHHHHHHHHGG--GTEEEEEEEESCCHHHHHHHHHHHT
T ss_pred CCcceeEcCCCCEEEHHHcCCC-EEEEEEECCCCHHHHHHHHHHHHHHHHhcc--CCeEEEEEECCCCHHHHHHHHHHcC
Confidence 6889999999998887665554 444444421 1222334444443332 3588888877421 111 1233
Q ss_pred eeEEEecCHHHHHHHHHHhhhcccCCCCCceEEeecceeeeeCCeEE--eeeeecHHHHHHHHHHHHHhc
Q 025696 152 IAFRFLPDPAQIRNALELKAADVRTGFDGVPVFQSELLVVKKKNKRY--CPVYFQKEDIEKELSKVSRAS 219 (249)
Q Consensus 152 ~~f~fVP~~~qV~~A~~L~~~~g~~~f~GVPVF~~~~Lti~~~~~~~--~PlFF~keDL~~~l~k~~k~~ 219 (249)
+.|.++-+... .+.+. -+..|+|-++ .+.++|+.+ ..=+.+.++|.+.++++.+..
T Consensus 83 ~~~~~~~d~~~-----~~~~~---~~v~~~P~~~----lid~~G~i~~~~~G~~~~~~l~~~l~~ll~~~ 140 (151)
T 2f9s_A 83 VNFPVVLDTDR-----QVLDA---YDVSPLPTTF----LINPEGKVVKVVTGTMTESMIHDYMNLIKPGE 140 (151)
T ss_dssp CCSCEEEETTS-----HHHHH---TTCCSSCEEE----EECTTSEEEEEEESCCCHHHHHHHHHHHSCC-
T ss_pred CCceEEECCch-----HHHHh---cCCCCCCeEE----EECCCCcEEEEEeCCCCHHHHHHHHHHHHhhh
Confidence 44444433211 11111 1135788644 111222211 112348999999999886543
No 45
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=23.32 E-value=1.4e+02 Score=21.40 Aligned_cols=120 Identities=10% Similarity=0.002 Sum_probs=61.9
Q ss_pred CCcEEEEEcCCCCeEEEeCCCCCeeEEEEee------cHHHHHHHHHH---HHHhcccccCCeEEEEEehhHHH----hh
Q 025696 81 GTAVYTVSNSSNEFVLISDPNGAKSIGLLCF------RQEDAEAFLAQ---VRLRRKELRSAAKVVPITLDQVY----ML 147 (249)
Q Consensus 81 ~VPVF~Vtn~~g~plli~~~~g~~~v~~fF~------s~~DAqa~L~q---lk~~~P~l~~~~kV~~v~L~~vy----~l 147 (249)
..|-|.++|.+|..+..+.-.|. .+...|. ++..... |.+ +.+...+ .++.|..|+++.-- +.
T Consensus 6 ~~p~f~l~~~~g~~~~l~~~~gk-~vll~F~a~~C~~C~~~~~~-l~~~~~l~~~~~~--~~~~~v~v~~d~~~~~~~~~ 81 (142)
T 3ewl_A 6 KAADFTYVTVHGDNSRMSRLKAQ-YTMLFFYDPDCSNCRKFEKL-FAEIPAFVEMVEN--GTLRVLAIYPDENREEWATK 81 (142)
T ss_dssp BCCCCEEECTTCCEEEGGGCCCS-EEEEEECCSSCHHHHHHHHH-HHTCHHHHHHHHH--TSEEEEEEECSSCHHHHHHH
T ss_pred cCCCCEEECCCCCEEEhhhcCCC-EEEEEEECCCCccHHHHHHH-HHHhHHHHHHhcc--CCeEEEEEEecCCHHHHHHH
Confidence 47889999999999888776654 4444444 2232221 222 3333222 45888888876311 11
Q ss_pred -hcCCeeEEEecCHHHHHHHHHHhhhcccCCCCCceEEeecceeeeeCCeEEeeeeecHHHHHHHHHHH
Q 025696 148 -KVEGIAFRFLPDPAQIRNALELKAADVRTGFDGVPVFQSELLVVKKKNKRYCPVYFQKEDIEKELSKV 215 (249)
Q Consensus 148 -~~~~~~f~fVP~~~qV~~A~~L~~~~g~~~f~GVPVF~~~~Lti~~~~~~~~PlFF~keDL~~~l~k~ 215 (249)
+..++.|.++-+...--. . .+ .=+..|+|-++ .+.++|+. +--..+.+++++.+++.
T Consensus 82 ~~~~~~~~~~~~d~~~~~~-~--~~---~~~v~~~P~~~----lid~~G~i-~~~~~~~~~l~~~l~~~ 139 (142)
T 3ewl_A 82 AVYMPQGWIVGWNKAGDIR-T--RQ---LYDIRATPTIY----LLDGRKRV-ILKDTSMEQLIDYLATQ 139 (142)
T ss_dssp HTTSCTTCEEEECTTCHHH-H--TT---CSCCCSSSEEE----EECTTCBE-EECSCCHHHHHHHHHC-
T ss_pred HHHcCCCcceeeCCccchh-h--HH---HcCCCCCCeEE----EECCCCCE-EecCCCHHHHHHHHHHH
Confidence 234556666555432111 0 00 11134788543 12222221 11346788888888764
No 46
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=23.01 E-value=1.9e+02 Score=21.19 Aligned_cols=48 Identities=10% Similarity=0.057 Sum_probs=32.3
Q ss_pred HHHHhhcC----CCcEEEEEcCCCCeEEEeCCCCCeeEEEEeecHHHHHHHHHHHHHhccc
Q 025696 73 DFVSKTLA----GTAVYTVSNSSNEFVLISDPNGAKSIGLLCFRQEDAEAFLAQVRLRRKE 129 (249)
Q Consensus 73 ~~i~ekL~----~VPVF~Vtn~~g~plli~~~~g~~~v~~fF~s~~DAqa~L~qlk~~~P~ 129 (249)
.++.++++ ++|.+.|.|.+|..+-.. .|. .+.++..++|+++++.++.
T Consensus 93 ~~~~~~~~~~v~~~P~~~lid~~G~i~~~~--~g~-------~~~~~l~~~l~~l~~~~~~ 144 (151)
T 3raz_A 93 RNFMKTYGNTVGVLPFTVVEAPKCGYRQTI--TGE-------VNEKSLTDAVKLAHSKCRE 144 (151)
T ss_dssp HHHHHTTTCCSCCSSEEEEEETTTTEEEEC--CSC-------CCHHHHHHHHHHHHTC---
T ss_pred HHHHHHhCCccCCCCEEEEECCCCcEEEEE--CCC-------CCHHHHHHHHHHHHHHhhc
Confidence 34555554 899999999999865542 222 3678889999999887654
No 47
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=22.99 E-value=1.5e+02 Score=22.91 Aligned_cols=58 Identities=10% Similarity=0.082 Sum_probs=35.7
Q ss_pred CCcEEEEEcCCCCeEEEeCCCCCeeEEEEee------cHHHHHHHHHHHHHhcccccCCeEEEEEehh
Q 025696 81 GTAVYTVSNSSNEFVLISDPNGAKSIGLLCF------RQEDAEAFLAQVRLRRKELRSAAKVVPITLD 142 (249)
Q Consensus 81 ~VPVF~Vtn~~g~plli~~~~g~~~v~~fF~------s~~DAqa~L~qlk~~~P~l~~~~kV~~v~L~ 142 (249)
.+|=|.++|.+|..+..+.-.|. .+...|. ++.+.. .|+++.++..+ .+++|..|+.+
T Consensus 28 ~~p~f~l~~~~G~~~~l~~~~Gk-~vlv~F~atwC~~C~~~~p-~l~~l~~~~~~--~~v~vv~vs~d 91 (181)
T 2p31_A 28 DFYDFKAVNIRGKLVSLEKYRGS-VSLVVNVASECGFTDQHYR-ALQQLQRDLGP--HHFNVLAFPCN 91 (181)
T ss_dssp CGGGCEEEBTTSCEEEGGGGTTS-EEEEEEECSSSTTHHHHHH-HHHHHHHHHGG--GTEEEEEEECC
T ss_pred ccCceEeecCCCCEecHHHcCCC-EEEEEEeccCCCCcHHHHH-HHHHHHHHhhc--CCEEEEEEECc
Confidence 47889999999998887665554 3443443 344433 34444443333 35888888765
No 48
>3uma_A Hypothetical peroxiredoxin protein; nysgrc, PSI biology, structural genomics, NEW YORK structura genomics research consortium; 2.20A {Sinorhizobium meliloti}
Probab=22.49 E-value=31 Score=27.93 Aligned_cols=77 Identities=12% Similarity=0.105 Sum_probs=47.3
Q ss_pred CCcEEEEEcC--CC-CeEEEeC-CCCCeeEEEEee-------cHH-HHHHHHHHHHHhcccccCCeE-EEEEehhHHHhh
Q 025696 81 GTAVYTVSNS--SN-EFVLISD-PNGAKSIGLLCF-------RQE-DAEAFLAQVRLRRKELRSAAK-VVPITLDQVYML 147 (249)
Q Consensus 81 ~VPVF~Vtn~--~g-~plli~~-~~g~~~v~~fF~-------s~~-DAqa~L~qlk~~~P~l~~~~k-V~~v~L~~vy~l 147 (249)
..|-|++.+. +| ..+..++ -.|.. +.++|+ +.. ++..+.+..++- . ..++. |..|+.+....+
T Consensus 31 ~aPdf~l~~~~~~G~~~v~L~d~~~Gk~-vvL~f~~a~wcp~C~~~e~p~l~~~~~~~-~--~~gv~~vv~Is~d~~~~~ 106 (184)
T 3uma_A 31 KLPNATFKEKTADGPVEVTTELLFKGKR-VVLFAVPGAFTPTCSLNHLPGYLENRDAI-L--ARGVDDIAVVAVNDLHVM 106 (184)
T ss_dssp BCCCCEEEEEETTEEEEEEHHHHHTTSE-EEEEEESCTTCHHHHHTHHHHHHHTHHHH-H--TTTCCEEEEEESSCHHHH
T ss_pred CCCCcEeecccCCCceEEeHHHHhCCCC-EEEEEEcCCCCCCcCHHHHHHHHHHHHHH-H--HcCCCEEEEEECCCHHHH
Confidence 4678888876 77 7777665 34543 444544 444 455443332221 1 14577 999999987766
Q ss_pred h----cCCee--EEEecCHH
Q 025696 148 K----VEGIA--FRFLPDPA 161 (249)
Q Consensus 148 ~----~~~~~--f~fVP~~~ 161 (249)
+ +.++. |.++.|..
T Consensus 107 ~~f~~~~~~~~~fp~l~D~~ 126 (184)
T 3uma_A 107 GAWATHSGGMGKIHFLSDWN 126 (184)
T ss_dssp HHHHHHHTCTTTSEEEECTT
T ss_pred HHHHHHhCCCCceEEEEcCc
Confidence 3 35666 88998864
No 49
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=21.83 E-value=1.5e+02 Score=21.91 Aligned_cols=58 Identities=10% Similarity=0.126 Sum_probs=36.1
Q ss_pred CCcEEEEEcCCCCeEEEeCCCCCeeEEEEee------cHHHHHHHHHHHHHhcccccCCeEEEEEehh
Q 025696 81 GTAVYTVSNSSNEFVLISDPNGAKSIGLLCF------RQEDAEAFLAQVRLRRKELRSAAKVVPITLD 142 (249)
Q Consensus 81 ~VPVF~Vtn~~g~plli~~~~g~~~v~~fF~------s~~DAqa~L~qlk~~~P~l~~~~kV~~v~L~ 142 (249)
.+|=|.++|.+|..+..+.-.|. .+...|. ++.+.. .|+++.++..+ .+++|..|+.+
T Consensus 10 ~~p~f~l~~~~G~~~~l~~~~gk-~vlv~f~a~~C~~C~~~~~-~l~~l~~~~~~--~~~~vv~v~~d 73 (169)
T 2v1m_A 10 SIYEFTVKDINGVDVSLEKYRGH-VCLIVNVACKCGATDKNYR-QLQEMHTRLVG--KGLRILAFPCN 73 (169)
T ss_dssp SGGGCEEEBTTSCEEEGGGGTTS-EEEEEEECSSSTTHHHHHH-HHHHHHHHHGG--GTEEEEEEECC
T ss_pred ccccceeecCCCCCccHHHcCCC-EEEEEEeeccCCchHHHHH-HHHHHHHHhhc--CCeEEEEEECC
Confidence 47889999999999888766554 3443443 333332 33444443332 35889888875
No 50
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=21.68 E-value=1.7e+02 Score=22.30 Aligned_cols=59 Identities=14% Similarity=0.165 Sum_probs=36.8
Q ss_pred CCcEEEEEcCCCCeEEEeCCCCCeeEEEEee------cHHHHHHHHHHHHHhcccccCCeEEEEEehhH
Q 025696 81 GTAVYTVSNSSNEFVLISDPNGAKSIGLLCF------RQEDAEAFLAQVRLRRKELRSAAKVVPITLDQ 143 (249)
Q Consensus 81 ~VPVF~Vtn~~g~plli~~~~g~~~v~~fF~------s~~DAqa~L~qlk~~~P~l~~~~kV~~v~L~~ 143 (249)
.+|-|.++|.+|..+..+.-.|. .+...|. ++.... .|+++.++..+ .+++|..|+.+.
T Consensus 39 ~~p~f~l~~~~G~~~~l~~~~gk-~vll~F~a~~C~~C~~~~~-~l~~l~~~~~~--~~~~vv~v~~d~ 103 (186)
T 1jfu_A 39 KLPDLAFEDADGKPKKLSDFRGK-TLLVNLWATWCVPCRKEMP-ALDELQGKLSG--PNFEVVAINIDT 103 (186)
T ss_dssp BCCCCEEECTTSCEEEGGGGTTS-EEEEEEECTTCHHHHHHHH-HHHHHHHHHCB--TTEEEEEEECCC
T ss_pred cCCCcEeEcCCCCEeeHHHcCCC-EEEEEEEeCCCHhHHHHHH-HHHHHHHHhcc--CCcEEEEEECCC
Confidence 47889999999999887765554 3444444 223222 23444443332 568899998874
No 51
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=20.92 E-value=86 Score=23.48 Aligned_cols=77 Identities=12% Similarity=0.028 Sum_probs=43.8
Q ss_pred CcEEEEEcCCCCeEEEeCCCCCeeEEEEee-------cHHHHHHHHHHHHHhccccc-CCeEEEEEehhHH----Hhh--
Q 025696 82 TAVYTVSNSSNEFVLISDPNGAKSIGLLCF-------RQEDAEAFLAQVRLRRKELR-SAAKVVPITLDQV----YML-- 147 (249)
Q Consensus 82 VPVF~Vtn~~g~plli~~~~g~~~v~~fF~-------s~~DAqa~L~qlk~~~P~l~-~~~kV~~v~L~~v----y~l-- 147 (249)
.|-|.++|.+| .+..+.-.|. .+...|. ++... ..|+++.++..+.+ .+++|..|+.+.- -.+
T Consensus 16 ~p~f~l~~~~g-~~~l~~~~gk-~vll~f~~~~C~~~C~~~~-~~l~~~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~ 92 (172)
T 2k6v_A 16 PVDFALEGPQG-PVRLSQFQDK-VVLLFFGFTRCPDVCPTTL-LALKRAYEKLPPKAQERVQVIFVSVDPERDPPEVADR 92 (172)
T ss_dssp ECCCEEECSSS-EEEGGGSTTS-EEEEEEECTTCSSHHHHHH-HHHHHHHTTSCHHHHTTEEEEEEESCTTTCCHHHHHH
T ss_pred CCCeEEEcCCC-CCcHHHhCCC-EEEEEEECCCCcchhHHHH-HHHHHHHHHhhhhccCCEEEEEEEECCCCCCHHHHHH
Confidence 57789999999 8777665554 3443443 22222 23334444332211 3688999997632 111
Q ss_pred --hcCCeeEEEecCHH
Q 025696 148 --KVEGIAFRFLPDPA 161 (249)
Q Consensus 148 --~~~~~~f~fVP~~~ 161 (249)
++.+..|.++.+..
T Consensus 93 ~~~~~~~~~~~l~d~~ 108 (172)
T 2k6v_A 93 YAKAFHPSFLGLSGSP 108 (172)
T ss_dssp HHHHHCTTEEEECCCH
T ss_pred HHHHhCCCcEEEeCCH
Confidence 23467788888765
No 52
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=20.82 E-value=1.9e+02 Score=20.02 Aligned_cols=54 Identities=11% Similarity=0.079 Sum_probs=32.0
Q ss_pred CcEEEEEcCCCCeEEEeCCCCCeeEEEEeec---H--HHHHHHHHHHHHhcccccCCeEEEEE
Q 025696 82 TAVYTVSNSSNEFVLISDPNGAKSIGLLCFR---Q--EDAEAFLAQVRLRRKELRSAAKVVPI 139 (249)
Q Consensus 82 VPVF~Vtn~~g~plli~~~~g~~~v~~fF~s---~--~DAqa~L~qlk~~~P~l~~~~kV~~v 139 (249)
+|-|.++|.+|..+..+.-.|. .+...|+. . ......++++.++ ...+..+..+
T Consensus 2 ~p~f~l~~~~g~~~~l~~~~gk-~~lv~f~~~~C~~C~~~~~~l~~~~~~---~~~~~~~v~i 60 (138)
T 4evm_A 2 VADFELMGVDGKTYRLSDYKGK-KVYLKFWASWCSICLASLPDTDEIAKE---AGDDYVVLTV 60 (138)
T ss_dssp CCCCEEEBTTSCEEEGGGGTTS-EEEEEECCTTCHHHHHHHHHHHHHHHT---CTTTEEEEEE
T ss_pred CCcceeECCCCCEEEHHHhCCC-EEEEEEEcCcCHHHHHHHHHHHHHHHH---hCCCcEEEEE
Confidence 6889999999999888766554 34444442 1 1222234444443 3346666666
Done!