Query 025696
Match_columns 249
No_of_seqs 132 out of 147
Neff 5.7
Searched_HMMs 13730
Date Mon Mar 25 15:37:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025696.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/025696hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1xvwa1 c.47.1.10 (A:1-153) Pu 75.5 1.8 0.00013 31.8 4.9 76 81-159 7-93 (153)
2 d1xvqa_ c.47.1.10 (A:) Thiol p 61.9 5.4 0.00039 29.9 5.1 61 81-148 22-89 (166)
3 d1xzoa1 c.47.1.10 (A:3-174) Th 60.1 3.5 0.00025 31.0 3.7 62 81-143 10-77 (172)
4 d1st9a_ c.47.1.10 (A:) Thiol-d 48.8 18 0.0013 25.4 5.9 58 81-142 4-67 (137)
5 d1q98a_ c.47.1.10 (A:) Thiol p 47.7 13 0.00098 27.5 5.3 76 81-162 21-108 (164)
6 d2a4va1 c.47.1.10 (A:59-214) P 44.9 2.9 0.00021 31.2 0.8 77 81-161 10-98 (156)
7 d1qxha_ c.47.1.10 (A:) Thiol p 42.6 15 0.0011 27.1 4.8 61 82-148 24-91 (164)
8 d1psqa_ c.47.1.10 (A:) Probabl 32.0 26 0.0019 25.7 4.5 61 81-147 21-88 (163)
9 d2cz4a1 d.58.5.1 (A:1-100) Hyp 28.3 38 0.0028 23.2 4.7 66 74-139 20-91 (100)
10 d2bf5a1 d.137.1.1 (A:11-102) T 26.7 42 0.003 23.3 4.5 43 105-151 2-44 (92)
11 d1jfua_ c.47.1.10 (A:) Membran 23.1 68 0.005 23.1 5.6 58 81-142 35-98 (176)
No 1
>d1xvwa1 c.47.1.10 (A:1-153) Putative peroxiredoxin Rv2238c/MT2298 {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=75.48 E-value=1.8 Score=31.82 Aligned_cols=76 Identities=18% Similarity=0.294 Sum_probs=52.1
Q ss_pred CCcEEEEEcCCCCeEEEeCCCCCeeEEEEee-------cHHHHHHHHHHHHHhcccccCCeEEEEEehhHHHhhh----c
Q 025696 81 GTAVYTVSNSSNEFVLISDPNGAKSIGLLCF-------RQEDAEAFLAQVRLRRKELRSAAKVVPITLDQVYMLK----V 149 (249)
Q Consensus 81 ~VPVF~Vtn~~g~plli~~~~g~~~v~~fF~-------s~~DAqa~L~qlk~~~P~l~~~~kV~~v~L~~vy~l~----~ 149 (249)
..|-|+++|.+|..+..++-.|.+.+..+|+ +..++.++.+...+- ...++.|..++.|....++ .
T Consensus 7 ~aPdF~l~d~~G~~~slsd~~g~~~vvl~~~~~~~cp~C~~e~~~l~~~~~~~---~~~~~~vi~vs~d~~~~~~~~~~~ 83 (153)
T d1xvwa1 7 TAPDFTLRDQNQQLVTLRGYRGAKNVLLVFFPLAFTGICQGELDQLRDHLPEF---ENDDSAALAISVGPPPTHKIWATQ 83 (153)
T ss_dssp BCCCCEEECTTSCEEEGGGGTTTCEEEEEECSCTTSSHHHHHHHHHHHTGGGT---SSSSEEEEEEESCCHHHHHHHHHH
T ss_pred CCcCeEEECCCCCEEeHHHHcCCCcEEEEecccccccchhhhhhhhhhhhhhh---cccccccccccchhhhHHHHHhhh
Confidence 4799999999999999887777666776766 345544444443332 1346899999988887763 3
Q ss_pred CCeeEEEecC
Q 025696 150 EGIAFRFLPD 159 (249)
Q Consensus 150 ~~~~f~fVP~ 159 (249)
.++.|.++-+
T Consensus 84 ~~~~~~~l~~ 93 (153)
T d1xvwa1 84 SGFTFPLLSD 93 (153)
T ss_dssp HTCCSCEEEC
T ss_pred hccceeEEec
Confidence 5666666654
No 2
>d1xvqa_ c.47.1.10 (A:) Thiol peroxidase Tpx {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=61.92 E-value=5.4 Score=29.86 Aligned_cols=61 Identities=18% Similarity=0.209 Sum_probs=45.4
Q ss_pred CCcEEEEEcCCCCeEEEeCCCCCeeEEEEee-------cHHHHHHHHHHHHHhcccccCCeEEEEEehhHHHhhh
Q 025696 81 GTAVYTVSNSSNEFVLISDPNGAKSIGLLCF-------RQEDAEAFLAQVRLRRKELRSAAKVVPITLDQVYMLK 148 (249)
Q Consensus 81 ~VPVF~Vtn~~g~plli~~~~g~~~v~~fF~-------s~~DAqa~L~qlk~~~P~l~~~~kV~~v~L~~vy~l~ 148 (249)
..|=|++.+.+|+.+..++-.|. .+.++|+ +..+...+-++++. .+++|..|+.+..+.++
T Consensus 22 ~aP~F~L~~~~g~~v~L~d~~Gk-~vvl~f~~~~~~p~C~~e~~~l~~~~~~------~g~~vv~Is~d~~~~~~ 89 (166)
T d1xvqa_ 22 PAPAFTLTGGDLGVISSDQFRGK-SVLLNIFPSVDTPVCATSVRTFDERAAA------SGATVLCVSKDLPFAQK 89 (166)
T ss_dssp BCCCCEEECTTSCEEEGGGGTTS-CEEEEECSCCCSSCCCHHHHHHHHHHHH------TTCEEEEEESSCHHHHT
T ss_pred CCCCeEEECCCCCEEehHHhCCc-EEEEEeeecccccccHHHHHHHhhhccc------ccccccccccchHHHHH
Confidence 36889999999999888776665 4555555 66667666555443 35789999999999884
No 3
>d1xzoa1 c.47.1.10 (A:3-174) Thioredoxin-like protein Sco1 (YpmQ), soluble domain {Bacillus subtilis [TaxId: 1423]}
Probab=60.12 E-value=3.5 Score=30.95 Aligned_cols=62 Identities=11% Similarity=0.185 Sum_probs=36.5
Q ss_pred CCcEEEEEcCCCCeEEEeCCCCCeeEEEEee------cHHHHHHHHHHHHHhcccccCCeEEEEEehhH
Q 025696 81 GTAVYTVSNSSNEFVLISDPNGAKSIGLLCF------RQEDAEAFLAQVRLRRKELRSAAKVVPITLDQ 143 (249)
Q Consensus 81 ~VPVF~Vtn~~g~plli~~~~g~~~v~~fF~------s~~DAqa~L~qlk~~~P~l~~~~kV~~v~L~~ 143 (249)
.||-|+++|.+|..+..+.-+|...+..|+. ++.....+- ++...-.+.+.++.+..|++|-
T Consensus 10 ~~p~F~l~d~~G~~vsl~d~~Gk~vvl~F~~t~Cp~~C~~~~~~l~-~~~~~~~~~~~~v~~v~isiDp 77 (172)
T d1xzoa1 10 EVEPFTFQNQDGKNVSLESLKGEVWLADFIFTNCETICPPMTAHMT-DLQKKLKAENIDVRIISFSVDP 77 (172)
T ss_dssp ECCCCEEECTTSCEEETGGGTTCCEEEEEECSCCSSCCCSHHHHHH-HHHHHHHHTTCCCEEEEEESCT
T ss_pred cCCCeEEEcCCCCEEcHHHhCCCEEEEEEecccccccccccchhhh-hhhhhhcccccccccccccccc
Confidence 4899999999999998877777543333322 222333222 2222111223468888888763
No 4
>d1st9a_ c.47.1.10 (A:) Thiol-disulfide oxidoreductase ResA {Bacillus subtilis [TaxId: 1423]}
Probab=48.79 E-value=18 Score=25.37 Aligned_cols=58 Identities=12% Similarity=0.220 Sum_probs=35.1
Q ss_pred CCcEEEEEcCCCCeEEEeCCCCCeeEEEEee------cHHHHHHHHHHHHHhcccccCCeEEEEEehh
Q 025696 81 GTAVYTVSNSSNEFVLISDPNGAKSIGLLCF------RQEDAEAFLAQVRLRRKELRSAAKVVPITLD 142 (249)
Q Consensus 81 ~VPVF~Vtn~~g~plli~~~~g~~~v~~fF~------s~~DAqa~L~qlk~~~P~l~~~~kV~~v~L~ 142 (249)
..|-|.++|.+|+.+-.+.-.|.. +...|+ ++..+.. +.++.++.++ .++.|..++.+
T Consensus 4 ~~P~f~l~~~~G~~~~l~~~~gk~-~li~f~~~~C~~C~~~~~~-l~~~~~~~~~--~~~~~v~i~~~ 67 (137)
T d1st9a_ 4 DAPNFVLEDTNGKRIELSDLKGKG-VFLNFWGTWCEPCKKEFPY-MANQYKHFKS--QGVEIVAVNVG 67 (137)
T ss_dssp ECCCCEEECTTSCEEEGGGGTTSE-EEEEEECTTCHHHHHHHHH-HHHHHHHHGG--GTEEEEEEEES
T ss_pred cCCCeEEECCCcCEEeHHHhCCCE-EEEEEeeccccceeecccc-cccccccccc--ccccccccccc
Confidence 379999999999988887766654 433443 2333333 3333333233 35788888764
No 5
>d1q98a_ c.47.1.10 (A:) Thiol peroxidase Tpx {Haemophilus influenzae [TaxId: 727]}
Probab=47.70 E-value=13 Score=27.50 Aligned_cols=76 Identities=18% Similarity=0.137 Sum_probs=52.4
Q ss_pred CCcEEEEEcCCCCeEEEeCCCCCeeEEEEee-------cHHHHHHHHHHHHHhcccccCCeEEEEEehhHHHhhh----c
Q 025696 81 GTAVYTVSNSSNEFVLISDPNGAKSIGLLCF-------RQEDAEAFLAQVRLRRKELRSAAKVVPITLDQVYMLK----V 149 (249)
Q Consensus 81 ~VPVF~Vtn~~g~plli~~~~g~~~v~~fF~-------s~~DAqa~L~qlk~~~P~l~~~~kV~~v~L~~vy~l~----~ 149 (249)
..|=|++.|.+|..+..++-.|.. +.++|+ +..++.+|-+.+.+ . +++.|..|+-+..+.++ .
T Consensus 21 ~APdF~L~d~~g~~v~Lsd~~Gk~-vVL~f~p~~~tp~C~~e~~~~~~~~~~----~-~~~~vi~iS~d~~~~~~~~~~~ 94 (164)
T d1q98a_ 21 IVENFILVGNDLADVALNDFASKR-KVLNIFPSIDTGVCATSVRKFNQQAAK----L-SNTIVLCISADLPFAQARFCGA 94 (164)
T ss_dssp BCCCCEEECTTSCEEEGGGGTTSE-EEEEECSCSCSSCCCHHHHHHHHHHHH----S-TTEEEEEEESSCHHHHTTCTTT
T ss_pred CCCCcEEECCCCCEEeehhhCCcE-EEEEecCccccCcccHHHHHHHHHHHH----h-ccceEEeecCCcHHHHHHHHHH
Confidence 378899999999999887766654 555554 55667666665544 2 36899999999998874 2
Q ss_pred CCe-eEEEecCHHH
Q 025696 150 EGI-AFRFLPDPAQ 162 (249)
Q Consensus 150 ~~~-~f~fVP~~~q 162 (249)
.++ .+.++.+...
T Consensus 95 ~~~~~~~~~~~~~~ 108 (164)
T d1q98a_ 95 EGIENAKTVSTFRN 108 (164)
T ss_dssp TTCTTEEEEECTTC
T ss_pred hCCccccccccccc
Confidence 444 3556665433
No 6
>d2a4va1 c.47.1.10 (A:59-214) Peroxiredoxin dot5 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=44.86 E-value=2.9 Score=31.20 Aligned_cols=77 Identities=18% Similarity=0.329 Sum_probs=50.7
Q ss_pred CCcEEEEEcCCCCeEEEeCCCC-CeeEEEEee-------cHHHHHHHHHHHHHhcccccCCeEEEEEehhHHHhhh----
Q 025696 81 GTAVYTVSNSSNEFVLISDPNG-AKSIGLLCF-------RQEDAEAFLAQVRLRRKELRSAAKVVPITLDQVYMLK---- 148 (249)
Q Consensus 81 ~VPVF~Vtn~~g~plli~~~~g-~~~v~~fF~-------s~~DAqa~L~qlk~~~P~l~~~~kV~~v~L~~vy~l~---- 148 (249)
..|-|++.|.+|+.+..+.-.| .+-|..||. +..++.++-+... +......+..|+-+.+..++
T Consensus 10 ~aP~f~L~~~~g~~~~l~~~~~k~~~vvlff~p~~~cp~C~~~~~~~~~~~~----~~~~~~~~~~is~d~~~~~~~f~~ 85 (156)
T d2a4va1 10 PIPDLSLLNEDNDSISLKKITENNRVVVFFVYPRASTPGSTRQASGFRDNYQ----ELKEYAAVFGLSADSVTSQKKFQS 85 (156)
T ss_dssp BCCSCEEECTTSCEEEHHHHHHHCSEEEEEECSSSSSHHHHHHHHHHHHHHH----HHTTTCEEEEEESCCHHHHHHHHH
T ss_pred CCCCeEEECCCCCEEeeHHHcCCccEEEEEecccccCcchhhhhHHHHHHHH----HHhhccceeeeccchhhhHHhhhc
Confidence 4799999999999888755322 223444442 3455555544333 34445568889988887773
Q ss_pred cCCeeEEEecCHH
Q 025696 149 VEGIAFRFLPDPA 161 (249)
Q Consensus 149 ~~~~~f~fVP~~~ 161 (249)
+.++.|.++.|+.
T Consensus 86 ~~~l~f~~L~D~~ 98 (156)
T d2a4va1 86 KQNLPYHLLSDPK 98 (156)
T ss_dssp HHTCSSEEEECTT
T ss_pred ccCccceeccchH
Confidence 4578999999864
No 7
>d1qxha_ c.47.1.10 (A:) Thiol peroxidase Tpx {Escherichia coli [TaxId: 562]}
Probab=42.64 E-value=15 Score=27.13 Aligned_cols=61 Identities=15% Similarity=0.119 Sum_probs=44.6
Q ss_pred CcEEEEEcCCCCeEEEeCCCCCeeEEEEee-------cHHHHHHHHHHHHHhcccccCCeEEEEEehhHHHhhh
Q 025696 82 TAVYTVSNSSNEFVLISDPNGAKSIGLLCF-------RQEDAEAFLAQVRLRRKELRSAAKVVPITLDQVYMLK 148 (249)
Q Consensus 82 VPVF~Vtn~~g~plli~~~~g~~~v~~fF~-------s~~DAqa~L~qlk~~~P~l~~~~kV~~v~L~~vy~l~ 148 (249)
.|=|++.|.+|+.+..++-.|. .+.++|+ +..++..+-+...+ . .++.|..|+.+....++
T Consensus 24 APdF~L~~~~g~~vsLsd~~GK-~vvl~f~~~~~~p~C~~~~~~l~~~~~~----~-~~~~vv~Is~d~~~~~~ 91 (164)
T d1qxha_ 24 AQTFTLVAKDLSDVTLGQFAGK-RKVLNIFPSIDTGVCAASVRKFNQLATE----I-DNTVVLCISADLPFAQS 91 (164)
T ss_dssp CCCCEEECTTSCEEEGGGGTTS-EEEEEECSCSCSSCCCHHHHHHHHHHHT----S-TTEEEEEEESSCHHHHT
T ss_pred CCCeEEECCCCCEEeHHHhCCC-eEEEEEecchhcccchHHHHHHHHHHHh----h-ccceeeeEEcCCHHHHH
Confidence 6889999999999988776665 4555554 56667766554432 1 36899999999888774
No 8
>d1psqa_ c.47.1.10 (A:) Probable thiol peroxidase PsaD {Streptococcus pneumoniae [TaxId: 1313]}
Probab=31.98 E-value=26 Score=25.68 Aligned_cols=61 Identities=11% Similarity=0.200 Sum_probs=42.2
Q ss_pred CCcEEEEEcCCCCeEEEeCCCCCeeEEEEee-------cHHHHHHHHHHHHHhcccccCCeEEEEEehhHHHhh
Q 025696 81 GTAVYTVSNSSNEFVLISDPNGAKSIGLLCF-------RQEDAEAFLAQVRLRRKELRSAAKVVPITLDQVYML 147 (249)
Q Consensus 81 ~VPVF~Vtn~~g~plli~~~~g~~~v~~fF~-------s~~DAqa~L~qlk~~~P~l~~~~kV~~v~L~~vy~l 147 (249)
..|=|++.|.+|..+..++-.|...|. +|+ +..++..+-+.+. +. .++.|..|+.+..+.+
T Consensus 21 ~aPdF~L~~~~g~~vsLsd~~gk~~vl-~f~~~~~~p~C~~~~~~l~~~~~----~~-~~~~vv~Is~d~~~~~ 88 (163)
T d1psqa_ 21 KALDFSLTTTDLSKKSLADFDGKKKVL-SVVPSIDTGICSTQTRRFNEELA----GL-DNTVVLTVSMDLPFAQ 88 (163)
T ss_dssp BCCCCEEECTTSCEEEGGGGTTSEEEE-EECSCTTSHHHHHHHHHHHHHTT----TC-TTEEEEEEESSCHHHH
T ss_pred CCCCeEEECCCCCEEehHHhCCcEEEE-EeccccccccchhhHHHHHHHHH----hh-cccceEEEEeccHHHH
Confidence 477899999999999887766654444 444 4555555543322 32 3688999999888766
No 9
>d2cz4a1 d.58.5.1 (A:1-100) Hypothetical protein TTHA0516 {Thermus thermophilus [TaxId: 274]}
Probab=28.33 E-value=38 Score=23.25 Aligned_cols=66 Identities=17% Similarity=0.084 Sum_probs=40.9
Q ss_pred HHHhhcC--CCcEEEEEcCCCCe---EEEeCCCCCeeEEEEeecHHHHHHHHHHHHHh-cccccCCeEEEEE
Q 025696 74 FVSKTLA--GTAVYTVSNSSNEF---VLISDPNGAKSIGLLCFRQEDAEAFLAQVRLR-RKELRSAAKVVPI 139 (249)
Q Consensus 74 ~i~ekL~--~VPVF~Vtn~~g~p---lli~~~~g~~~v~~fF~s~~DAqa~L~qlk~~-~P~l~~~~kV~~v 139 (249)
.+.+.|. ||+=|||.+-.|.- .....-+|.+--.-++.+.++|++.++.++.. .+..+..+-|.+|
T Consensus 20 ~v~~~L~~~Gv~G~Tv~~v~G~G~~~~~~~~~~g~~v~Ieivv~~e~~~~vv~~I~~~~~~~~~G~ifv~~V 91 (100)
T d2cz4a1 20 RLVEEVKRLGAKGYTITPARGEGSRGIRSVDWEGQNIRLETIVSEEVALRILQRLQEEYFPHYAVIAYVENV 91 (100)
T ss_dssp HHHHHHHHTTCCCCEEEEEBCTTCCCTTCSCSTTCEEEEEEEECHHHHHHHHHHHHHHTTTTSCCEEEEEEE
T ss_pred HHHHHHHHCCCCceEEEeCEEEccCCCCcccCccceEEEEEEECHHHHHHHHHHHHHHhcCCCcEEEEEEEE
Confidence 4444443 79999999877721 00011124455566788999999999999873 4555544444443
No 10
>d2bf5a1 d.137.1.1 (A:11-102) Toluene-4-monooxygenase catalytic effector protein {Pseudomonas mendocina [TaxId: 300]}
Probab=26.69 E-value=42 Score=23.30 Aligned_cols=43 Identities=9% Similarity=0.143 Sum_probs=30.9
Q ss_pred eEEEEeecHHHHHHHHHHHHHhcccccCCeEEEEEehhHHHhhhcCC
Q 025696 105 SIGLLCFRQEDAEAFLAQVRLRRKELRSAAKVVPITLDQVYMLKVEG 151 (249)
Q Consensus 105 ~v~~fF~s~~DAqa~L~qlk~~~P~l~~~~kV~~v~L~~vy~l~~~~ 151 (249)
.||+++..-++|.+.++.+...||+ +.|.+-.-..-++...+|
T Consensus 2 ~Vgpvl~~~e~~~avveai~~DNP~----~~i~V~d~~a~vrI~a~g 44 (92)
T d2bf5a1 2 NVGPIIRAGDLVEPVIETAEIDNPG----KEITVEDRRAYVRIAAEG 44 (92)
T ss_dssp EEEEEECCHHHHHHHHHHHHHHSTT----CCCEEECCTTCEEEEEES
T ss_pred ceeeEEecChhHHHHHHHHHhHCCC----CEEEEeecCcEEEEecCC
Confidence 4899999999999999999999996 334444444444444333
No 11
>d1jfua_ c.47.1.10 (A:) Membrane-anchored thioredoxin-like protein TlpA, soluble domain {Bradyrhizobium japonicum [TaxId: 375]}
Probab=23.05 E-value=68 Score=23.12 Aligned_cols=58 Identities=14% Similarity=0.145 Sum_probs=35.2
Q ss_pred CCcEEEEEcCCCCeEEEeCCCCCeeEEEEee------cHHHHHHHHHHHHHhcccccCCeEEEEEehh
Q 025696 81 GTAVYTVSNSSNEFVLISDPNGAKSIGLLCF------RQEDAEAFLAQVRLRRKELRSAAKVVPITLD 142 (249)
Q Consensus 81 ~VPVF~Vtn~~g~plli~~~~g~~~v~~fF~------s~~DAqa~L~qlk~~~P~l~~~~kV~~v~L~ 142 (249)
.+|=|.++|.+|..+..+.-+|. .+...|+ ++.+...+. ++.+. -...+..|..|+.+
T Consensus 35 ~~Pdf~l~d~~G~~v~L~~~kGK-~vll~F~a~wC~~C~~~~~~l~-~~~~~--~~~~~~~vv~vs~d 98 (176)
T d1jfua_ 35 KLPDLAFEDADGKPKKLSDFRGK-TLLVNLWATWCVPCRKEMPALD-ELQGK--LSGPNFEVVAINID 98 (176)
T ss_dssp BCCCCEEECTTSCEEEGGGGTTS-EEEEEEECTTCHHHHHHHHHHH-HHHHH--HCBTTEEEEEEECC
T ss_pred cCCCeEEECCCcCEEeHHHhCCC-EEEEEeccCcccchHHHHHhhh-hcccc--cccccccccccccc
Confidence 37889999999999988776664 4554554 333333332 22221 12245778888765
Done!