BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 025698
(249 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9M3V8|RS6_ASPOF 40S ribosomal protein S6 OS=Asparagus officinalis GN=rps6 PE=2 SV=1
Length = 251
Score = 468 bits (1203), Expect = e-131, Method: Compositional matrix adjust.
Identities = 228/243 (93%), Positives = 238/243 (97%)
Query: 1 MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVNGDALGEEFKGYVFKIMGGCDKQG 60
MKFNIANPTTGCQKKLEIDDDQKLRAF+DKRISQEV+GDALGEEFKGYVFKIMGGCDKQG
Sbjct: 1 MKFNIANPTTGCQKKLEIDDDQKLRAFYDKRISQEVSGDALGEEFKGYVFKIMGGCDKQG 60
Query: 61 FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRDGERRRKSVRGCIVSPDLSVLNLVIVKKGE 120
FPMKQGVLTPGRVRLLLHRGTPCFRGYGRR+GERRRKSVRGCIVSPDLSVLNLVIVKKGE
Sbjct: 61 FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGE 120
Query: 121 HDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKKVSKAPKI 180
+DLPGLTD EKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFT K GK SKAPKI
Sbjct: 121 NDLPGLTDVEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTNKKGKTCSKAPKI 180
Query: 181 QRLVTPLTLQRKRARIAEKKQRIAKAKAEAAEYQKLLATRLKEQRERRSESLAKKRSRLS 240
QRLVTPLTLQRKRARIAEKK+R+AKAK+EAAEYQKLLA+RLKEQR+RRSESLAKKRSRLS
Sbjct: 181 QRLVTPLTLQRKRARIAEKKKRVAKAKSEAAEYQKLLASRLKEQRDRRSESLAKKRSRLS 240
Query: 241 AAS 243
AA+
Sbjct: 241 AAA 243
>sp|P51430|RS62_ARATH 40S ribosomal protein S6-2 OS=Arabidopsis thaliana GN=RPS6B PE=1
SV=3
Length = 249
Score = 458 bits (1179), Expect = e-128, Method: Compositional matrix adjust.
Identities = 225/249 (90%), Positives = 238/249 (95%)
Query: 1 MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVNGDALGEEFKGYVFKIMGGCDKQG 60
MKFN+ANPTTGCQKKLEIDDDQKLRAFFDKR+SQEV+GDALGEEFKGYVFKIMGGCDKQG
Sbjct: 1 MKFNVANPTTGCQKKLEIDDDQKLRAFFDKRLSQEVSGDALGEEFKGYVFKIMGGCDKQG 60
Query: 61 FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRDGERRRKSVRGCIVSPDLSVLNLVIVKKGE 120
FPMKQGVLTPGRVRLLLHRGTPCFRG+GRR GERRRKSVRGCIVSPDLSVLNLVIVKKG
Sbjct: 61 FPMKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIVSPDLSVLNLVIVKKGV 120
Query: 121 HDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKKVSKAPKI 180
DLPGLTDTEKPRMRGPKRASKIRKLFNL KEDDVRKYVNTYRRTFT K GKKVSKAPKI
Sbjct: 121 SDLPGLTDTEKPRMRGPKRASKIRKLFNLGKEDDVRKYVNTYRRTFTNKKGKKVSKAPKI 180
Query: 181 QRLVTPLTLQRKRARIAEKKQRIAKAKAEAAEYQKLLATRLKEQRERRSESLAKKRSRLS 240
QRLVTPLTLQRKRARIA+KK+RIAKA ++AA+YQKLLA+RLKEQR+RRSESLAKKRSRLS
Sbjct: 181 QRLVTPLTLQRKRARIADKKKRIAKANSDAADYQKLLASRLKEQRDRRSESLAKKRSRLS 240
Query: 241 AASKPSIAA 249
+A +AA
Sbjct: 241 SAPAKPVAA 249
>sp|O48549|RS61_ARATH 40S ribosomal protein S6-1 OS=Arabidopsis thaliana GN=RPS6A PE=1
SV=2
Length = 250
Score = 437 bits (1125), Expect = e-122, Method: Compositional matrix adjust.
Identities = 224/250 (89%), Positives = 240/250 (96%), Gaps = 1/250 (0%)
Query: 1 MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVNGDALGEEFKGYVFKIMGGCDKQG 60
MKFN+ANPTTGCQKKLEIDDDQKLRAF+DKRISQEV+GDALGEEFKGYVFKI GGCDKQG
Sbjct: 1 MKFNVANPTTGCQKKLEIDDDQKLRAFYDKRISQEVSGDALGEEFKGYVFKIKGGCDKQG 60
Query: 61 FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRDGERRRKSVRGCIVSPDLSVLNLVIVKKGE 120
FPMKQGVLTPGRVRLLLHRGTPCFRG+GRR GERRRKSVRGCIVSPDLSVLNLVIVKKGE
Sbjct: 61 FPMKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIVSPDLSVLNLVIVKKGE 120
Query: 121 HDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKKVSKAPKI 180
+DLPGLTDTEKPRMRGPKRASKIRKLFNL KEDDVR YVNTYRR FT K GK+VSKAPKI
Sbjct: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLKKEDDVRTYVNTYRRKFTNKKGKEVSKAPKI 180
Query: 181 QRLVTPLTLQRKRARIAEKKQRIAKAKAEAAEYQKLLATRLKEQRERRSESLAKKRSRL- 239
QRLVTPLTLQRKRARIA+KK++IAKA ++AA+YQKLLA+RLKEQR+RRSESLAKKRSRL
Sbjct: 181 QRLVTPLTLQRKRARIADKKKKIAKANSDAADYQKLLASRLKEQRDRRSESLAKKRSRLS 240
Query: 240 SAASKPSIAA 249
SAA+KPS+ A
Sbjct: 241 SAAAKPSVTA 250
>sp|P29345|RS6_TOBAC 40S ribosomal protein S6 (Fragment) OS=Nicotiana tabacum GN=RPS6
PE=2 SV=2
Length = 199
Score = 337 bits (864), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 176/204 (86%), Positives = 187/204 (91%), Gaps = 5/204 (2%)
Query: 46 KGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRDGERRRKSVRGCIVS 105
KGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLL+RGTPCFRGYGRR+GERRRKSVRGCIVS
Sbjct: 1 KGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLYRGTPCFRGYGRRNGERRRKSVRGCIVS 60
Query: 106 PDLSVLNLVIVKKGEHDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRT 165
PDLSVLNLVIVKKGE+DLPGLTDTEKPRMRGP+ + L+ KEDDVRKYVNT
Sbjct: 61 PDLSVLNLVIVKKGENDLPGLTDTEKPRMRGPREPQRSEALY--FKEDDVRKYVNTT-AE 117
Query: 166 FTTKSGKKVSKAPKIQRLVTPLTLQRKRARIAEKKQRIAKAKAEAAEYQKLLATRLKEQR 225
FTTK K SKAPKIQRLVTPLTLQRKRARIA+KK+RIAKAK+EAAEYQKLLA+RLKEQR
Sbjct: 118 FTTKW--KGSKAPKIQRLVTPLTLQRKRARIADKKKRIAKAKSEAAEYQKLLASRLKEQR 175
Query: 226 ERRSESLAKKRSRLSAASKPSIAA 249
E+RSESLAKKRSRLSAASKPSIAA
Sbjct: 176 EKRSESLAKKRSRLSAASKPSIAA 199
>sp|P62755|RS6_RAT 40S ribosomal protein S6 OS=Rattus norvegicus GN=Rps6 PE=1 SV=1
Length = 249
Score = 308 bits (789), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 162/241 (67%), Positives = 189/241 (78%), Gaps = 5/241 (2%)
Query: 1 MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVNGDALGEEFKGYVFKIMGGCDKQG 60
MK NI+ P TGCQK +E+DD++KLR F++KR++ EV DALGEE+KGYV +I GG DKQG
Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQG 60
Query: 61 FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRDGERRRKSVRGCIVSPDLSVLNLVIVKKGE 120
FPMKQGVLT GRVRLLL +G C+R RR GER+RKSVRGCIV +LSVLNLVIVKKGE
Sbjct: 61 FPMKQGVLTHGRVRLLLSKGHSCYRP--RRTGERKRKSVRGCIVDANLSVLNLVIVKKGE 118
Query: 121 HDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKKVSKAPKI 180
D+PGLTDT PR GPKRAS+IRKLFNLSKEDDVR+YV R+ + K +KAPKI
Sbjct: 119 KDIPGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYV--VRKPLNKEGKKPRTKAPKI 176
Query: 181 QRLVTPLTLQRKRARIAEKKQRIAKAKAEAAEYQKLLATRLKEQRERRSESLAKKRSRLS 240
QRLVTP LQ KR RIA KKQR K K EAAEY KLLA R+KE +E+R E +AK+R RLS
Sbjct: 177 QRLVTPRVLQHKRRRIALKKQRTKKNKEEAAEYAKLLAKRMKEAKEKRQEQIAKRR-RLS 235
Query: 241 A 241
+
Sbjct: 236 S 236
>sp|P62754|RS6_MOUSE 40S ribosomal protein S6 OS=Mus musculus GN=Rps6 PE=1 SV=1
Length = 249
Score = 308 bits (789), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 162/241 (67%), Positives = 189/241 (78%), Gaps = 5/241 (2%)
Query: 1 MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVNGDALGEEFKGYVFKIMGGCDKQG 60
MK NI+ P TGCQK +E+DD++KLR F++KR++ EV DALGEE+KGYV +I GG DKQG
Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQG 60
Query: 61 FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRDGERRRKSVRGCIVSPDLSVLNLVIVKKGE 120
FPMKQGVLT GRVRLLL +G C+R RR GER+RKSVRGCIV +LSVLNLVIVKKGE
Sbjct: 61 FPMKQGVLTHGRVRLLLSKGHSCYRP--RRTGERKRKSVRGCIVDANLSVLNLVIVKKGE 118
Query: 121 HDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKKVSKAPKI 180
D+PGLTDT PR GPKRAS+IRKLFNLSKEDDVR+YV R+ + K +KAPKI
Sbjct: 119 KDIPGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYV--VRKPLNKEGKKPRTKAPKI 176
Query: 181 QRLVTPLTLQRKRARIAEKKQRIAKAKAEAAEYQKLLATRLKEQRERRSESLAKKRSRLS 240
QRLVTP LQ KR RIA KKQR K K EAAEY KLLA R+KE +E+R E +AK+R RLS
Sbjct: 177 QRLVTPRVLQHKRRRIALKKQRTKKNKEEAAEYAKLLAKRMKEAKEKRQEQIAKRR-RLS 235
Query: 241 A 241
+
Sbjct: 236 S 236
>sp|Q4R4K6|RS6_MACFA 40S ribosomal protein S6 OS=Macaca fascicularis GN=RPS6 PE=2 SV=1
Length = 249
Score = 308 bits (789), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 162/241 (67%), Positives = 189/241 (78%), Gaps = 5/241 (2%)
Query: 1 MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVNGDALGEEFKGYVFKIMGGCDKQG 60
MK NI+ P TGCQK +E+DD++KLR F++KR++ EV DALGEE+KGYV +I GG DKQG
Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQG 60
Query: 61 FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRDGERRRKSVRGCIVSPDLSVLNLVIVKKGE 120
FPMKQGVLT GRVRLLL +G C+R RR GER+RKSVRGCIV +LSVLNLVIVKKGE
Sbjct: 61 FPMKQGVLTHGRVRLLLSKGHSCYRP--RRTGERKRKSVRGCIVDANLSVLNLVIVKKGE 118
Query: 121 HDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKKVSKAPKI 180
D+PGLTDT PR GPKRAS+IRKLFNLSKEDDVR+YV R+ + K +KAPKI
Sbjct: 119 KDIPGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYV--VRKPLNKEGKKPRTKAPKI 176
Query: 181 QRLVTPLTLQRKRARIAEKKQRIAKAKAEAAEYQKLLATRLKEQRERRSESLAKKRSRLS 240
QRLVTP LQ KR RIA KKQR K K EAAEY KLLA R+KE +E+R E +AK+R RLS
Sbjct: 177 QRLVTPRVLQHKRRRIALKKQRTKKNKEEAAEYAKLLAKRMKEAKEKRQEQIAKRR-RLS 235
Query: 241 A 241
+
Sbjct: 236 S 236
>sp|P62753|RS6_HUMAN 40S ribosomal protein S6 OS=Homo sapiens GN=RPS6 PE=1 SV=1
Length = 249
Score = 308 bits (789), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 162/241 (67%), Positives = 189/241 (78%), Gaps = 5/241 (2%)
Query: 1 MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVNGDALGEEFKGYVFKIMGGCDKQG 60
MK NI+ P TGCQK +E+DD++KLR F++KR++ EV DALGEE+KGYV +I GG DKQG
Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQG 60
Query: 61 FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRDGERRRKSVRGCIVSPDLSVLNLVIVKKGE 120
FPMKQGVLT GRVRLLL +G C+R RR GER+RKSVRGCIV +LSVLNLVIVKKGE
Sbjct: 61 FPMKQGVLTHGRVRLLLSKGHSCYRP--RRTGERKRKSVRGCIVDANLSVLNLVIVKKGE 118
Query: 121 HDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKKVSKAPKI 180
D+PGLTDT PR GPKRAS+IRKLFNLSKEDDVR+YV R+ + K +KAPKI
Sbjct: 119 KDIPGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYV--VRKPLNKEGKKPRTKAPKI 176
Query: 181 QRLVTPLTLQRKRARIAEKKQRIAKAKAEAAEYQKLLATRLKEQRERRSESLAKKRSRLS 240
QRLVTP LQ KR RIA KKQR K K EAAEY KLLA R+KE +E+R E +AK+R RLS
Sbjct: 177 QRLVTPRVLQHKRRRIALKKQRTKKNKEEAAEYAKLLAKRMKEAKEKRQEQIAKRR-RLS 235
Query: 241 A 241
+
Sbjct: 236 S 236
>sp|Q5E995|RS6_BOVIN 40S ribosomal protein S6 OS=Bos taurus GN=RPS6 PE=2 SV=1
Length = 249
Score = 307 bits (787), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 162/241 (67%), Positives = 188/241 (78%), Gaps = 5/241 (2%)
Query: 1 MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVNGDALGEEFKGYVFKIMGGCDKQG 60
MK NI+ P TGCQK +E+DD++KLR F++KR++ EV DALGEE+KGYV +I GG DKQG
Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQG 60
Query: 61 FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRDGERRRKSVRGCIVSPDLSVLNLVIVKKGE 120
FPMKQGVLT GRVRLLL +G C+R RR GER+RKSVRGCIV +LSVLNLVIVKKGE
Sbjct: 61 FPMKQGVLTHGRVRLLLSKGHSCYRP--RRTGERKRKSVRGCIVDANLSVLNLVIVKKGE 118
Query: 121 HDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKKVSKAPKI 180
D+PGLTDT PR GPKRAS+IRKLFNLSKEDDVR+YV R+ K +KAPKI
Sbjct: 119 KDIPGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYV--VRKPLNKDGKKPRTKAPKI 176
Query: 181 QRLVTPLTLQRKRARIAEKKQRIAKAKAEAAEYQKLLATRLKEQRERRSESLAKKRSRLS 240
QRLVTP LQ KR RIA KKQR K K EAAEY KLLA R+KE +E+R E +AK+R RLS
Sbjct: 177 QRLVTPRVLQHKRRRIALKKQRTKKNKEEAAEYAKLLAKRMKEAKEKRQEQIAKRR-RLS 235
Query: 241 A 241
+
Sbjct: 236 S 236
>sp|P47838|RS6_CHICK 40S ribosomal protein S6 OS=Gallus gallus GN=RPS6 PE=2 SV=1
Length = 249
Score = 303 bits (776), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 158/241 (65%), Positives = 188/241 (78%), Gaps = 5/241 (2%)
Query: 1 MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVNGDALGEEFKGYVFKIMGGCDKQG 60
MK NI+ P TGCQK +E+DD++ +R F++KR++ EV D+LGEE+KGYV +I GG DKQG
Sbjct: 1 MKLNISFPATGCQKLIEVDDERNVRTFYEKRMATEVAADSLGEEWKGYVVRISGGNDKQG 60
Query: 61 FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRDGERRRKSVRGCIVSPDLSVLNLVIVKKGE 120
FPMKQGVLT GRVRLLL +G C+R RR GER+RKSVRGCIV +LSVLNLVIVKKGE
Sbjct: 61 FPMKQGVLTHGRVRLLLSKGHSCYRP--RRTGERKRKSVRGCIVDANLSVLNLVIVKKGE 118
Query: 121 HDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKKVSKAPKI 180
D+PGLTDT PR GPKRAS+IRKLFNLSKEDDVR+YV R+ + K +KAPKI
Sbjct: 119 KDIPGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYV--VRKPLNKEGKKPRTKAPKI 176
Query: 181 QRLVTPLTLQRKRARIAEKKQRIAKAKAEAAEYQKLLATRLKEQRERRSESLAKKRSRLS 240
QRLVTP LQ KR RIA KKQR K K EAA+Y KLLA R+KE +E+R E +AK+R RLS
Sbjct: 177 QRLVTPRVLQHKRRRIALKKQRTQKNKEEAADYAKLLAKRMKEAKEKRQEQIAKRR-RLS 235
Query: 241 A 241
+
Sbjct: 236 S 236
>sp|Q90YR8|RS6_ICTPU 40S ribosomal protein S6 OS=Ictalurus punctatus GN=rps6 PE=2 SV=1
Length = 249
Score = 302 bits (774), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 159/241 (65%), Positives = 189/241 (78%), Gaps = 5/241 (2%)
Query: 1 MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVNGDALGEEFKGYVFKIMGGCDKQG 60
MK NI+ P TGCQK +E+DD++KLR F++KR++ EV D LG+E+KGYV +I GG DKQG
Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADPLGDEWKGYVVRISGGNDKQG 60
Query: 61 FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRDGERRRKSVRGCIVSPDLSVLNLVIVKKGE 120
FPMKQGVLT GRVRLLL +G C+R RR GER+RKSVRGCIV +LSVLNLVI++KGE
Sbjct: 61 FPMKQGVLTNGRVRLLLSKGHSCYRP--RRTGERKRKSVRGCIVDANLSVLNLVIIRKGE 118
Query: 121 HDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKKVSKAPKI 180
D+PGLTD+ PR GPKRAS+IRKLFNLSKEDDVR+YV RR T + K +KAPKI
Sbjct: 119 KDIPGLTDSTVPRRLGPKRASRIRKLFNLSKEDDVRQYV--VRRPLTKEGKKPRTKAPKI 176
Query: 181 QRLVTPLTLQRKRARIAEKKQRIAKAKAEAAEYQKLLATRLKEQRERRSESLAKKRSRLS 240
QRLVTP LQ KR RIA K+QR K K EAAEY KLLA RLKE +E+R E +AK+R RLS
Sbjct: 177 QRLVTPRVLQHKRRRIALKRQRTQKNKDEAAEYAKLLAKRLKEAKEKRQEKIAKRR-RLS 235
Query: 241 A 241
+
Sbjct: 236 S 236
>sp|Q9YGF2|RS6_ONCMY 40S ribosomal protein S6 OS=Oncorhynchus mykiss GN=rps6 PE=2 SV=1
Length = 249
Score = 298 bits (764), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 156/241 (64%), Positives = 188/241 (78%), Gaps = 5/241 (2%)
Query: 1 MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVNGDALGEEFKGYVFKIMGGCDKQG 60
MK NI+ P TGCQK +E+DD++KLR F++KR++ EV D LG+E+KGY+ +I GG DKQG
Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADPLGDEWKGYMVRISGGNDKQG 60
Query: 61 FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRDGERRRKSVRGCIVSPDLSVLNLVIVKKGE 120
FPMKQGVLT GRVRLLL +G C+R RR GER+RKSVRGCI +LSVLNLVI+KKGE
Sbjct: 61 FPMKQGVLTHGRVRLLLAKGHSCYRP--RRTGERKRKSVRGCIGDANLSVLNLVIIKKGE 118
Query: 121 HDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKKVSKAPKI 180
D+PGLTD+ PR GPKRASKIRKLFNL+KEDDVR+YV RR T + K +KAP+I
Sbjct: 119 KDIPGLTDSTVPRRLGPKRASKIRKLFNLAKEDDVRQYV--VRRPLTKEGKKPRTKAPRI 176
Query: 181 QRLVTPLTLQRKRARIAEKKQRIAKAKAEAAEYQKLLATRLKEQRERRSESLAKKRSRLS 240
QRLVTP LQ KR RIA KKQR K K EA+EY KLLA R+KE +E+R E +AK+R RLS
Sbjct: 177 QRLVTPRVLQHKRRRIALKKQRTQKNKEEASEYAKLLAKRMKEAKEKRQEQIAKRR-RLS 235
Query: 241 A 241
+
Sbjct: 236 S 236
>sp|Q9BMX5|RS6_APLCA 40S ribosomal protein S6 OS=Aplysia californica GN=RPS6 PE=2 SV=1
Length = 247
Score = 297 bits (761), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 153/231 (66%), Positives = 182/231 (78%), Gaps = 5/231 (2%)
Query: 1 MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVNGDALGEEFKGYVFKIMGGCDKQG 60
MK NI+ P TGCQK +E+DD++KLR F+DKRIS E++ D LG+E+KGYV +I GG DKQG
Sbjct: 1 MKLNISYPATGCQKLIEVDDEKKLRPFYDKRISAELSADCLGDEWKGYVVRISGGNDKQG 60
Query: 61 FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRDGERRRKSVRGCIVSPDLSVLNLVIVKKGE 120
FPMKQGVLT RVRLLL + C+R RR GER+RKSVRGCIV +LSVL+LVI+KKGE
Sbjct: 61 FPMKQGVLTATRVRLLLDKNHSCYR--PRRTGERKRKSVRGCIVDSNLSVLSLVIIKKGE 118
Query: 121 HDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKKV-SKAPK 179
D+PGLTD PR GPKRASKIRKLFNLSKEDDVR+YV RR + GKK SKAPK
Sbjct: 119 QDIPGLTDKTIPRRLGPKRASKIRKLFNLSKEDDVRQYV--VRRPLPERDGKKAKSKAPK 176
Query: 180 IQRLVTPLTLQRKRARIAEKKQRIAKAKAEAAEYQKLLATRLKEQRERRSE 230
IQRLVTP+ LQRKRAR+A KK+R+ K + + AEY KLLA R+KE +ER+ E
Sbjct: 177 IQRLVTPVVLQRKRARMALKKKRVTKKREDHAEYTKLLAQRMKEAKERKME 227
>sp|P39017|RS6_XENLA 40S ribosomal protein S6 OS=Xenopus laevis GN=rps6 PE=2 SV=1
Length = 249
Score = 296 bits (759), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 156/241 (64%), Positives = 186/241 (77%), Gaps = 5/241 (2%)
Query: 1 MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVNGDALGEEFKGYVFKIMGGCDKQG 60
MK NI+ P TGCQK +E++D++KLR F++KR++ EV D LG+E+KGYV +I GG DKQG
Sbjct: 1 MKLNISFPATGCQKLIEVEDERKLRTFYEKRMATEVAADPLGDEWKGYVVRISGGNDKQG 60
Query: 61 FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRDGERRRKSVRGCIVSPDLSVLNLVIVKKGE 120
FPMKQGVLT GRVRLLL +G C+R RR GER+RKSVRGCIV +LSVLNLVIV+KGE
Sbjct: 61 FPMKQGVLTHGRVRLLLSKGHSCYRP--RRTGERKRKSVRGCIVDANLSVLNLVIVRKGE 118
Query: 121 HDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKKVSKAPKI 180
D+PGLTD PR GPKRAS+IRKLFNLSKEDDVR+YV R+ + K +KAPKI
Sbjct: 119 KDIPGLTDNTVPRRLGPKRASRIRKLFNLSKEDDVRQYV--VRKPLAKEGKKPRTKAPKI 176
Query: 181 QRLVTPLTLQRKRARIAEKKQRIAKAKAEAAEYQKLLATRLKEQRERRSESLAKKRSRLS 240
QRLVTP LQ KR RIA KKQR K K EA+EY KLLA R KE +E+R E +AK+R RLS
Sbjct: 177 QRLVTPRVLQHKRRRIALKKQRTQKNKEEASEYAKLLAKRSKEAKEKRQEQIAKRR-RLS 235
Query: 241 A 241
+
Sbjct: 236 S 236
>sp|Q2PQM1|RS6_GLOMM 40S ribosomal protein S6 OS=Glossina morsitans morsitans GN=RpS6
PE=2 SV=1
Length = 248
Score = 280 bits (716), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 146/232 (62%), Positives = 174/232 (75%), Gaps = 5/232 (2%)
Query: 1 MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVNGDALGEEFKGYVFKIMGGCDKQG 60
MK N++ P TGCQK E++D+ KLR F++K + Q V D LG+E+KGY+ +I GG DKQG
Sbjct: 1 MKLNVSYPATGCQKLFEVNDEHKLRVFYEKHMGQVVEADILGDEWKGYMLRISGGNDKQG 60
Query: 61 FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRDGERRRKSVRGCIVSPDLSVLNLVIVKKGE 120
FPMKQGVLT RVRLLL +G C+R RR GER+RKSVRGCIV ++SVL LVIVKKGE
Sbjct: 61 FPMKQGVLTHDRVRLLLKKGHSCYR--PRRTGERKRKSVRGCIVDANMSVLALVIVKKGE 118
Query: 121 HDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKK-VSKAPK 179
D+PGLTDT PR GPKRASKIRKL+NLSK DDVR YV RR K KK +SKAPK
Sbjct: 119 KDIPGLTDTSVPRRLGPKRASKIRKLYNLSKVDDVRPYV--IRRPLPAKDNKKAISKAPK 176
Query: 180 IQRLVTPLTLQRKRARIAEKKQRIAKAKAEAAEYQKLLATRLKEQRERRSES 231
IQRL+TP+ LQRKR RIA KK+R A +K AA+Y KLLA R KE + +R E+
Sbjct: 177 IQRLITPVVLQRKRRRIALKKKRQAASKEAAADYAKLLAQRKKESKAKREEA 228
>sp|O01727|RS6_BRAFL 40S ribosomal protein S6 OS=Branchiostoma floridae GN=RPS6 PE=3
SV=1
Length = 244
Score = 277 bits (709), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 149/244 (61%), Positives = 182/244 (74%), Gaps = 9/244 (3%)
Query: 1 MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVNGDALGEEFKGYVFKIMGGCDKQG 60
MK NI+ P TGCQK +E+DD++KLR F++KR+S ++ ++LG+E+KGY+ +I GG DKQG
Sbjct: 1 MKINISYPATGCQKLIEVDDERKLRPFYEKRMSHQMTAESLGDEWKGYLVRISGGNDKQG 60
Query: 61 FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRDGERRRKSVRGCIVSPDLSVLNLVIVKKGE 120
FPMKQGVLT GRVRLLL +G C+R RR GER+RKSVRGCIV +LSVLNLVI+KKGE
Sbjct: 61 FPMKQGVLTNGRVRLLLGKGHSCYRP--RRTGERKRKSVRGCIVDSNLSVLNLVILKKGE 118
Query: 121 HDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKKVS-KAPK 179
D+PGLTDT PR GPKRA +IRKLFNL+KEDDVR+YV RR K GKK K PK
Sbjct: 119 QDIPGLTDTTIPRRLGPKRAGRIRKLFNLNKEDDVRQYV--VRRPLPQKEGKKQKFKTPK 176
Query: 180 IQRLVTPLTLQRKRARIAEKKQRIAKAKAEAAEYQKLLATRLKEQRERRSESLAKKRSRL 239
IQRL+TP LQRKR A K++R AK + E A Y KLLA R KE+R E+ AK+RS
Sbjct: 177 IQRLITPQRLQRKRHMRAVKRRRYAKQREEEATYAKLLAKRKKEER----EAHAKRRSSA 232
Query: 240 SAAS 243
+S
Sbjct: 233 RESS 236
>sp|P05752|RS6A_SCHPO 40S ribosomal protein S6-A OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=rps6a PE=1 SV=2
Length = 239
Score = 273 bits (699), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 144/240 (60%), Positives = 176/240 (73%), Gaps = 4/240 (1%)
Query: 1 MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVNGDALGEEFKGYVFKIMGGCDKQG 60
MK NI+ P G QK +EIDDD++LR F +KR+ QEV GD++G EF GYVFKI GG DKQG
Sbjct: 1 MKLNISYPANGTQKLIEIDDDRRLRVFMEKRMGQEVPGDSVGPEFAGYVFKITGGNDKQG 60
Query: 61 FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRDGERRRKSVRGCIVSPDLSVLNLVIVKKGE 120
FPM QGVL P RVRLLL G PC+R RRDGER+RKSVRGCIV DL+VL L I+K+GE
Sbjct: 61 FPMFQGVLLPHRVRLLLRAGHPCYR--PRRDGERKRKSVRGCIVGQDLAVLALAIIKQGE 118
Query: 121 HDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKK-VSKAPK 179
D+PGLTD P+ GPKRASKIR+ FNLSKEDDVR++V R K GKK +KAPK
Sbjct: 119 QDIPGLTDVTVPKRLGPKRASKIRRFFNLSKEDDVRQFV-IRREVVPKKEGKKPYTKAPK 177
Query: 180 IQRLVTPLTLQRKRARIAEKKQRIAKAKAEAAEYQKLLATRLKEQRERRSESLAKKRSRL 239
IQRLVTP TLQ KR R A K+++ K + EAAE+ +L+A R+ E +++R A++ S L
Sbjct: 178 IQRLVTPRTLQHKRHRFALKRRQAEKNREEAAEFAQLMAKRVAEAKQKREVVKARRASSL 237
>sp|P29327|RS6_DROME 40S ribosomal protein S6 OS=Drosophila melanogaster GN=RpS6 PE=1
SV=1
Length = 248
Score = 273 bits (699), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 142/232 (61%), Positives = 172/232 (74%), Gaps = 5/232 (2%)
Query: 1 MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVNGDALGEEFKGYVFKIMGGCDKQG 60
MK N++ P TGCQK E+ D+ KLR F++KR+ Q V D LG+E+KGY +I GG DKQG
Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQG 60
Query: 61 FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRDGERRRKSVRGCIVSPDLSVLNLVIVKKGE 120
FPMKQGVLT GRVRLLL +G C+R RR GER+RKSVRGCIV ++SVL LV++KKGE
Sbjct: 61 FPMKQGVLTHGRVRLLLKKGHSCYR--PRRTGERKRKSVRGCIVDANMSVLALVVLKKGE 118
Query: 121 HDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKK-VSKAPK 179
D+PGLTDT PR GPKRASKIRKL+NLSKEDDVR++V RR K KK SKAPK
Sbjct: 119 KDIPGLTDTTIPRRLGPKRASKIRKLYNLSKEDDVRRFV--VRRPLPAKDNKKATSKAPK 176
Query: 180 IQRLVTPLTLQRKRARIAEKKQRIAKAKAEAAEYQKLLATRLKEQRERRSES 231
IQRL+TP+ LQRK RIA KK+R +K +A+Y KLL R KE + +R E+
Sbjct: 177 IQRLITPVVLQRKHRRIALKKKRQIASKEASADYAKLLVQRKKESKAKREEA 228
>sp|Q9C0Z7|RS6B_SCHPO 40S ribosomal protein S6-B OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=rps6b PE=1 SV=1
Length = 239
Score = 272 bits (695), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 143/240 (59%), Positives = 176/240 (73%), Gaps = 4/240 (1%)
Query: 1 MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVNGDALGEEFKGYVFKIMGGCDKQG 60
MK NI+ P G QK +EIDDD++LR F +KR+ QEV GD++G EF GYVFKI GG DKQG
Sbjct: 1 MKLNISYPANGTQKLIEIDDDRRLRVFMEKRMGQEVPGDSVGPEFAGYVFKITGGNDKQG 60
Query: 61 FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRDGERRRKSVRGCIVSPDLSVLNLVIVKKGE 120
FPM QGVL P RVRLLL G PC+R RRDGER+RKSVRGCIV DL+VL L IVK+GE
Sbjct: 61 FPMFQGVLLPHRVRLLLRAGHPCYR--PRRDGERKRKSVRGCIVGQDLAVLALAIVKQGE 118
Query: 121 HDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKK-VSKAPK 179
D+PGLTD P+ GPKRASKIR+ FNLSKEDDVR++V R K GKK +KAPK
Sbjct: 119 QDIPGLTDVTVPKRLGPKRASKIRRFFNLSKEDDVRQFV-IRREVVPKKEGKKPYTKAPK 177
Query: 180 IQRLVTPLTLQRKRARIAEKKQRIAKAKAEAAEYQKLLATRLKEQRERRSESLAKKRSRL 239
IQRLVTP TLQ KR R A K+++ K + EAAE+ +L+A R+ E ++++ A++ S +
Sbjct: 178 IQRLVTPRTLQHKRHRFALKRRQAEKNREEAAEFAQLMAKRVAEAKQKKEVVKARRASSM 237
>sp|Q9U761|RS6_AEDAE 40S ribosomal protein S6 OS=Aedes aegypti GN=RpS6 PE=2 SV=2
Length = 346
Score = 266 bits (679), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 136/218 (62%), Positives = 163/218 (74%), Gaps = 5/218 (2%)
Query: 1 MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVNGDALGEEFKGYVFKIMGGCDKQG 60
MK N++ P TG QK E+ DD KLR F+DKR+ E+ D LG+E+KGYVFKI GG DKQG
Sbjct: 1 MKLNVSFPATGAQKTFEVMDDHKLRHFYDKRMGAEITADHLGDEWKGYVFKIAGGNDKQG 60
Query: 61 FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRDGERRRKSVRGCIVSPDLSVLNLVIVKKGE 120
FPMKQGVLT RVRLLL +G C+R RR GER+RKSVRGCIV +LS L L++VKKGE
Sbjct: 61 FPMKQGVLTNTRVRLLLKKGHSCYR--PRRTGERKRKSVRGCIVDQNLSALALIVVKKGE 118
Query: 121 HDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKKV-SKAPK 179
D+PGLTDT PR GPKRAS IRKL+NL+KEDDVR++V +R K GKK +KAPK
Sbjct: 119 KDIPGLTDTTVPRRLGPKRASNIRKLYNLTKEDDVRQFV--VKRPLPEKDGKKARTKAPK 176
Query: 180 IQRLVTPLTLQRKRARIAEKKQRIAKAKAEAAEYQKLL 217
IQRL+TP+ LQRKR R+A KK+R+ K AEY K+L
Sbjct: 177 IQRLITPVVLQRKRHRLAIKKRRVESRKEAEAEYMKIL 214
>sp|Q95V32|RS6_SPOFR 40S ribosomal protein S6 OS=Spodoptera frugiperda GN=RpS6 PE=2 SV=1
Length = 253
Score = 265 bits (678), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 151/250 (60%), Positives = 182/250 (72%), Gaps = 8/250 (3%)
Query: 1 MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVNGDALGEEFKGYVFKIMGGCDKQG 60
MK N++ P TGCQK E+ D+ KLR F++KR+ EV D LG+E+KGYV +I GG DKQG
Sbjct: 1 MKLNVSFPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRIAGGNDKQG 60
Query: 61 FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRDGERRRKSVRGCIVSPDLSVLNLVIVKKGE 120
FPMKQGVLT RVRLL+ +G C+R RRDGER+RKSVRGCIV +LSVL LVIV+KGE
Sbjct: 61 FPMKQGVLTNSRVRLLMSKGHSCYRP--RRDGERKRKSVRGCIVDANLSVLALVIVRKGE 118
Query: 121 HDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKKVS----K 176
++PGLTD PR GPKRASKIRKLFNLSKEDDVR+YV +R K GK+ + K
Sbjct: 119 QEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYV--VKRLLPAKEGKENAKPRYK 176
Query: 177 APKIQRLVTPLTLQRKRARIAEKKQRIAKAKAEAAEYQKLLATRLKEQRERRSESLAKKR 236
APKIQRLVTP+ LQR+R R+A KK+R+AK K +Y KLLA R KE + RR E L ++R
Sbjct: 177 APKIQRLVTPVVLQRRRHRLALKKKRLAKRKQSENDYAKLLAQRKKESKVRRQEELKRRR 236
Query: 237 SRLSAASKPS 246
S SK S
Sbjct: 237 SASMRDSKSS 246
>sp|Q94624|RS6_MANSE 40S ribosomal protein S6 OS=Manduca sexta GN=RpS6 PE=2 SV=1
Length = 253
Score = 265 bits (676), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 149/250 (59%), Positives = 183/250 (73%), Gaps = 8/250 (3%)
Query: 1 MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVNGDALGEEFKGYVFKIMGGCDKQG 60
MK N++ P TGCQK E+ D+ KLR F++KR+ EV D LG+E+KGYV ++ GG DKQG
Sbjct: 1 MKLNVSFPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADLLGDEWKGYVLRVAGGNDKQG 60
Query: 61 FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRDGERRRKSVRGCIVSPDLSVLNLVIVKKGE 120
FPMKQGVLT RVRLL+ +G C+R RRDGER+RKSVRGCIV +LSVL LVIV+KGE
Sbjct: 61 FPMKQGVLTNSRVRLLMSKGHSCYRP--RRDGERKRKSVRGCIVDANLSVLALVIVRKGE 118
Query: 121 HDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKKVS----K 176
++PGLTD PR GPKRASKIRKLFNLSKEDDVR+YV + K GK+ + K
Sbjct: 119 QEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYV--VKALLPAKEGKENAKPRYK 176
Query: 177 APKIQRLVTPLTLQRKRARIAEKKQRIAKAKAEAAEYQKLLATRLKEQRERRSESLAKKR 236
APKIQRLVTP+ LQR+R R+A KK+R+AK K+ A+Y KLLA R KE + RR E + ++R
Sbjct: 177 APKIQRLVTPVVLQRRRHRLALKKKRLAKRKSAEADYAKLLAQRKKESKVRRQEEIKRRR 236
Query: 237 SRLSAASKPS 246
S SK S
Sbjct: 237 SASMRDSKSS 246
>sp|Q6BXH8|RS6_DEBHA 40S ribosomal protein S6 OS=Debaryomyces hansenii (strain ATCC
36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=RPS6 PE=3 SV=1
Length = 236
Score = 263 bits (672), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 136/241 (56%), Positives = 175/241 (72%), Gaps = 5/241 (2%)
Query: 1 MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVNGDALGEEFKGYVFKIMGGCDKQG 60
MK NI+ P G QK ++I+D+ KLR F++KR+ QEV GD +G+EFKGY+F+I GG DKQG
Sbjct: 1 MKLNISYPANGTQKCIDIEDEHKLRVFYEKRMGQEVEGDTVGDEFKGYIFRITGGNDKQG 60
Query: 61 FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRDGERRRKSVRGCIVSPDLSVLNLVIVKKGE 120
FPMKQGV+ P RV+LLL +G C+R RR GER+RKSVRGCIV+ DL+VL L +VK+G+
Sbjct: 61 FPMKQGVMHPTRVKLLLAKGHSCYR--PRRTGERKRKSVRGCIVAQDLAVLALSVVKQGD 118
Query: 121 HDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKKVSKAPKI 180
D+ GLTDT P+ GPKRA+ IRK F L+KEDDVR++V R K KK +KAPKI
Sbjct: 119 SDIEGLTDTTTPKRLGPKRANNIRKFFGLTKEDDVRQFVV---RREVVKGDKKYTKAPKI 175
Query: 181 QRLVTPLTLQRKRARIAEKKQRIAKAKAEAAEYQKLLATRLKEQRERRSESLAKKRSRLS 240
QRLVTP TLQRKRA A+K + + + AAEY +LLA RL E++ R+E ++ S L
Sbjct: 176 QRLVTPQTLQRKRALKAQKVKNAQQQRDAAAEYAQLLAQRLHERKAERAEIKKRRASSLK 235
Query: 241 A 241
A
Sbjct: 236 A 236
>sp|Q9U762|RS6_AEDAL 40S ribosomal protein S6 OS=Aedes albopictus GN=RpS6 PE=2 SV=1
Length = 349
Score = 263 bits (671), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 136/218 (62%), Positives = 162/218 (74%), Gaps = 5/218 (2%)
Query: 1 MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVNGDALGEEFKGYVFKIMGGCDKQG 60
MK N++ P TG QK E+ DD KLR F+DKR+ E+ D LG+E+KGYVFKI GG DKQG
Sbjct: 1 MKLNVSFPATGAQKTFEVMDDHKLRHFYDKRMGAEITADHLGDEWKGYVFKIAGGNDKQG 60
Query: 61 FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRDGERRRKSVRGCIVSPDLSVLNLVIVKKGE 120
FPMKQGVLT RVRLLL +G C+R RR GER+RKSVRGCIV +LS L L++VKKGE
Sbjct: 61 FPMKQGVLTNTRVRLLLKKGHSCYR--PRRTGERKRKSVRGCIVDQNLSALALIVVKKGE 118
Query: 121 HDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKKV-SKAPK 179
D+PGLTDT R GPKRAS IRKL+NL+KEDDVR+YV +R K GKK +KAPK
Sbjct: 119 KDIPGLTDTTVLRRLGPKRASNIRKLYNLTKEDDVRQYV--VKRPLPEKDGKKPRTKAPK 176
Query: 180 IQRLVTPLTLQRKRARIAEKKQRIAKAKAEAAEYQKLL 217
IQRL+TP+ LQRKR R+A KK+R+ K AEY K+L
Sbjct: 177 IQRLITPVVLQRKRHRLAIKKRRVESRKEAEAEYMKIL 214
>sp|P0CX38|RS6B_YEAST 40S ribosomal protein S6-B OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=RPS6B PE=1 SV=1
Length = 236
Score = 261 bits (666), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 143/241 (59%), Positives = 172/241 (71%), Gaps = 5/241 (2%)
Query: 1 MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVNGDALGEEFKGYVFKIMGGCDKQG 60
MK NI+ P G QK EIDD+ ++R FFDKRI QEV+G+A+G+EFKGYVFKI GG DKQG
Sbjct: 1 MKLNISYPVNGSQKTFEIDDEHRIRVFFDKRIGQEVDGEAVGDEFKGYVFKISGGNDKQG 60
Query: 61 FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRDGERRRKSVRGCIVSPDLSVLNLVIVKKGE 120
FPMKQGVL P R++LLL + C+R RRDGER+RKSVRG IV PDL+VL LVIVKKGE
Sbjct: 61 FPMKQGVLLPTRIKLLLTKNVSCYR--PRRDGERKRKSVRGAIVGPDLAVLALVIVKKGE 118
Query: 121 HDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKKVSKAPKI 180
+L GLTDT P+ GPKRA+ IRK F LSKEDDVR +V R TK K +KAPKI
Sbjct: 119 QELEGLTDTTVPKRLGPKRANNIRKFFGLSKEDDVRDFVI---RREVTKGEKTYTKAPKI 175
Query: 181 QRLVTPLTLQRKRARIAEKKQRIAKAKAEAAEYQKLLATRLKEQRERRSESLAKKRSRLS 240
QRLVTP LQRKR + A K + + AAEY +LLA RL E++ ++E ++ S L
Sbjct: 176 QRLVTPQRLQRKRHQRALKVRNAQAQREAAAEYAQLLAKRLSERKAEKAEIRKRRASSLK 235
Query: 241 A 241
A
Sbjct: 236 A 236
>sp|P0CX37|RS6A_YEAST 40S ribosomal protein S6-A OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=RPS6A PE=1 SV=1
Length = 236
Score = 261 bits (666), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 143/241 (59%), Positives = 172/241 (71%), Gaps = 5/241 (2%)
Query: 1 MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVNGDALGEEFKGYVFKIMGGCDKQG 60
MK NI+ P G QK EIDD+ ++R FFDKRI QEV+G+A+G+EFKGYVFKI GG DKQG
Sbjct: 1 MKLNISYPVNGSQKTFEIDDEHRIRVFFDKRIGQEVDGEAVGDEFKGYVFKISGGNDKQG 60
Query: 61 FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRDGERRRKSVRGCIVSPDLSVLNLVIVKKGE 120
FPMKQGVL P R++LLL + C+R RRDGER+RKSVRG IV PDL+VL LVIVKKGE
Sbjct: 61 FPMKQGVLLPTRIKLLLTKNVSCYR--PRRDGERKRKSVRGAIVGPDLAVLALVIVKKGE 118
Query: 121 HDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKKVSKAPKI 180
+L GLTDT P+ GPKRA+ IRK F LSKEDDVR +V R TK K +KAPKI
Sbjct: 119 QELEGLTDTTVPKRLGPKRANNIRKFFGLSKEDDVRDFVI---RREVTKGEKTYTKAPKI 175
Query: 181 QRLVTPLTLQRKRARIAEKKQRIAKAKAEAAEYQKLLATRLKEQRERRSESLAKKRSRLS 240
QRLVTP LQRKR + A K + + AAEY +LLA RL E++ ++E ++ S L
Sbjct: 176 QRLVTPQRLQRKRHQRALKVRNAQAQREAAAEYAQLLAKRLSERKAEKAEIRKRRASSLK 235
Query: 241 A 241
A
Sbjct: 236 A 236
>sp|Q6C169|RS6_YARLI 40S ribosomal protein S6 OS=Yarrowia lipolytica (strain CLIB 122 /
E 150) GN=RPS6 PE=3 SV=1
Length = 242
Score = 256 bits (655), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 136/222 (61%), Positives = 166/222 (74%), Gaps = 6/222 (2%)
Query: 1 MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVNGDALGEEFKGYVFKIMGGCDKQG 60
MK NIA P G QK ++I+D+ ++R F++KR+ QEV D LG+EFKGYV KI GG DKQG
Sbjct: 1 MKLNIAYPAQGTQKCIDIEDEHRVRGFYEKRMGQEVEADFLGDEFKGYVLKITGGNDKQG 60
Query: 61 FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRDGERRRKSVRGCIVSPDLSVLNLVIVKKGE 120
FPMKQGV+ P RVRLLL + + C+R RR GER+RKSVRGCIVS DLSVL++VIVK+G+
Sbjct: 61 FPMKQGVMHPTRVRLLLSKDSSCYR--SRRAGERKRKSVRGCIVSSDLSVLSVVIVKQGD 118
Query: 121 HDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKKVSKAPKI 180
D+ GLT PR GPKRA+ IRKLF LSKEDDVR+YV RR TTKSGK +KAPKI
Sbjct: 119 ADIEGLTTETVPRRLGPKRANNIRKLFALSKEDDVRQYV--IRREVTTKSGKTYTKAPKI 176
Query: 181 QRLVTPLTLQRKRARIAEKKQR-IAKAKAEAAEYQKLLATRL 221
QRL+TP L K A++ EKK + I +K AAEY +LLA R+
Sbjct: 177 QRLITPRRLAHK-AQLREKKVKAIQASKDAAAEYAQLLAKRV 217
>sp|Q9NEN6|RS6_CAEEL 40S ribosomal protein S6 OS=Caenorhabditis elegans GN=rps-6 PE=1
SV=1
Length = 246
Score = 254 bits (648), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 130/226 (57%), Positives = 168/226 (74%), Gaps = 4/226 (1%)
Query: 1 MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVNGDALGEEFKGYVFKIMGGCDKQG 60
M+ N A P TG QK E+D+++KLR FF+KR+SQEV DALG+E+KGYV +I GG DKQG
Sbjct: 1 MRLNFAYPATGLQKSFEVDEEKKLRLFFEKRMSQEVAIDALGDEWKGYVVRIGGGNDKQG 60
Query: 61 FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRDGERRRKSVRGCIVSPDLSVLNLVIVKKGE 120
FPMKQG+LT GRVRLLL +G C+R R++GER+RKSVRGCIV ++S L+LVIVKKG+
Sbjct: 61 FPMKQGILTNGRVRLLLKKGQSCYR--ERKNGERKRKSVRGCIVDANMSALSLVIVKKGD 118
Query: 121 HDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKKVSKAPKI 180
++ GLTD+ PR GPKRASKIRKLFNL+K DDV KYV T+ +TF K + APKI
Sbjct: 119 GEIEGLTDSVLPRKLGPKRASKIRKLFNLTKHDDVTKYVITHDKTFPDGVTKTI--APKI 176
Query: 181 QRLVTPLTLQRKRARIAEKKQRIAKAKAEAAEYQKLLATRLKEQRE 226
QRL+TP + RK+ + +K+ + K + +AA Y KLLA KE+ +
Sbjct: 177 QRLITPARIARKKYLLRQKRNQKIKMRDDAAAYHKLLAKYSKEEHD 222
>sp|Q6FJH3|RS6_CANGA 40S ribosomal protein S6 OS=Candida glabrata (strain ATCC 2001 /
CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=RPS6A
PE=3 SV=1
Length = 236
Score = 253 bits (647), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 137/241 (56%), Positives = 171/241 (70%), Gaps = 5/241 (2%)
Query: 1 MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVNGDALGEEFKGYVFKIMGGCDKQG 60
MK NIA P G QK +E+DD+ ++R F+DKRI QE+ G+A+G+EFKGY FKI GG DKQG
Sbjct: 1 MKLNIAYPVNGTQKTVEVDDEHRVRVFYDKRIGQEIEGEAVGDEFKGYTFKITGGNDKQG 60
Query: 61 FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRDGERRRKSVRGCIVSPDLSVLNLVIVKKGE 120
FPMKQGVL P RV+LLL +G C+R RR GER+RKSVRG IV PDL+VL+LVIVKKGE
Sbjct: 61 FPMKQGVLLPTRVKLLLAKGHSCYR--PRRSGERKRKSVRGAIVGPDLAVLSLVIVKKGE 118
Query: 121 HDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKKVSKAPKI 180
+L G+TD P+ GPKRA+ IRK F L+KEDDVR +V R TK K +KAPKI
Sbjct: 119 QELEGVTDATVPKRLGPKRANHIRKFFGLTKEDDVRDFVI---RREVTKGEKTYTKAPKI 175
Query: 181 QRLVTPLTLQRKRARIAEKKQRIAKAKAEAAEYQKLLATRLKEQRERRSESLAKKRSRLS 240
QRLVTP LQRKR + K + + AAEY +LLA RL E++ ++E+ ++ S L
Sbjct: 176 QRLVTPQRLQRKRYQRNLKVRNAQAQREAAAEYAQLLAKRLAERKAEKAETRKRRASSLK 235
Query: 241 A 241
A
Sbjct: 236 A 236
>sp|P41798|RS6_KLUMA 40S ribosomal protein S6 OS=Kluyveromyces marxianus GN=RPS6 PE=3
SV=1
Length = 235
Score = 253 bits (645), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 139/236 (58%), Positives = 172/236 (72%), Gaps = 9/236 (3%)
Query: 1 MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVNGDALGEEFKGYVFKIMGGCDKQG 60
MK NI+ P G QK +EIDD+ ++R F+DKRI QEV+G+A+G+EFKGYVFKI GG DKQG
Sbjct: 1 MKLNISYPINGTQKCVEIDDEHRVRVFYDKRIGQEVDGEAVGDEFKGYVFKIAGGNDKQG 60
Query: 61 FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRDGERRRKSVRGCIVSPDLSVLNLVIVKKGE 120
FPMKQGVL P RV+LL+ +GT C+R RR+GER+RKSVRG IV PDL+VL LVIVKKG+
Sbjct: 61 FPMKQGVLLPTRVKLLMAKGTSCYR--PRRNGERKRKSVRGAIVGPDLAVLALVIVKKGD 118
Query: 121 HDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKKVSKAPKI 180
++ G+T+ P+ GPKRA+ IRK F L+KEDDVR YV R TK K +KAPKI
Sbjct: 119 QEIEGVTNETVPKRLGPKRANNIRKFFGLTKEDDVRDYVI---RREVTKGEKTYTKAPKI 175
Query: 181 QRLVTPLTLQRKRARIAEKKQRIAKAKAEAAEYQKLLATRLKEQ----RERRSESL 232
QRLVTP LQRKR + A K + + AAEY +LLA RL E+ R+RR+ SL
Sbjct: 176 QRLVTPQRLQRKRQQKALKIKNAQAQREAAAEYAQLLAKRLAERKAEVRKRRASSL 231
>sp|Q74ZK3|RS6_ASHGO 40S ribosomal protein S6 OS=Ashbya gossypii (strain ATCC 10895 /
CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=RPS6 PE=3 SV=1
Length = 236
Score = 251 bits (642), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 133/241 (55%), Positives = 172/241 (71%), Gaps = 5/241 (2%)
Query: 1 MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVNGDALGEEFKGYVFKIMGGCDKQG 60
MK NI+ P G QK +E+DD+ ++R F+DKRI QEVNG+A+G+EFKGYVFKI GG DKQG
Sbjct: 1 MKLNISYPVNGTQKTIEVDDEHRVRVFYDKRIGQEVNGEAVGDEFKGYVFKIAGGNDKQG 60
Query: 61 FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRDGERRRKSVRGCIVSPDLSVLNLVIVKKGE 120
FPMKQGVL P RV+LL+ +GT C+R RR+GER+RKSVRG IV PDL+VL L+I KKG+
Sbjct: 61 FPMKQGVLLPTRVKLLMAKGTSCYR--PRRNGERKRKSVRGAIVGPDLAVLALIITKKGD 118
Query: 121 HDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKKVSKAPKI 180
++ G+T+ P+ GPKRA+ IRK F L+K+DDVR +V R K K +KAPKI
Sbjct: 119 QEIEGITNESVPKRLGPKRANNIRKFFGLTKDDDVRDFVI---RREVVKGDKTYTKAPKI 175
Query: 181 QRLVTPLTLQRKRARIAEKKQRIAKAKAEAAEYQKLLATRLKEQRERRSESLAKKRSRLS 240
QRLVTP LQRKR + A K + + AAEY +LLA RL E++ ++E ++ S L
Sbjct: 176 QRLVTPQRLQRKRHQRALKVRNAQAQREAAAEYAQLLAKRLTEKKAEKAEERKRRASSLK 235
Query: 241 A 241
A
Sbjct: 236 A 236
>sp|Q6CM04|RS6_KLULA 40S ribosomal protein S6 OS=Kluyveromyces lactis (strain ATCC 8585
/ CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37)
GN=RPS6 PE=3 SV=1
Length = 236
Score = 250 bits (639), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 135/241 (56%), Positives = 172/241 (71%), Gaps = 5/241 (2%)
Query: 1 MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVNGDALGEEFKGYVFKIMGGCDKQG 60
MK NI+ P G QK +EIDD+ ++R F+DKRI QEV+G+++G+EFKGYVFKI GG DKQG
Sbjct: 1 MKLNISYPINGTQKCIEIDDEHRVRVFYDKRIGQEVDGESVGDEFKGYVFKIAGGNDKQG 60
Query: 61 FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRDGERRRKSVRGCIVSPDLSVLNLVIVKKGE 120
FPMKQGVL P RV+LLL +G C+R RR+GER+RKSVRG IV PDL+VL L+I KKGE
Sbjct: 61 FPMKQGVLLPTRVKLLLAKGHSCYR--PRRNGERKRKSVRGAIVGPDLAVLALIITKKGE 118
Query: 121 HDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKKVSKAPKI 180
++ G+T+ P+ GPKRA+ IRK F L+KEDDVR YV R TK K +KAPKI
Sbjct: 119 QEIEGITNDTVPKRLGPKRANNIRKFFGLTKEDDVRDYVI---RREVTKGDKSYTKAPKI 175
Query: 181 QRLVTPLTLQRKRARIAEKKQRIAKAKAEAAEYQKLLATRLKEQRERRSESLAKKRSRLS 240
QRLVTP LQRKR + + K + + AAEY +LLA RL E++ ++E ++ S L
Sbjct: 176 QRLVTPQRLQRKRQQKSLKIKNAQAQREAAAEYAQLLAKRLSERKAEKAEVRKRRASSLK 235
Query: 241 A 241
A
Sbjct: 236 A 236
>sp|Q54UU3|RS6_DICDI 40S ribosomal protein S6 OS=Dictyostelium discoideum GN=rps6 PE=1
SV=1
Length = 236
Score = 242 bits (617), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 130/227 (57%), Positives = 158/227 (69%), Gaps = 3/227 (1%)
Query: 1 MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVNGDALGEEFKGYVFKIMGGCDKQG 60
MK NIA P G QKK+ I+D K+R F +KRI QEV LG+EFKGYVFKI GG D +G
Sbjct: 1 MKLNIAYPVNGSQKKINIEDKNKVRCFMEKRIGQEVEATTLGDEFKGYVFKITGGNDTEG 60
Query: 61 FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRDGERRRKSVRGCIVSPDLSVLNLVIVKKGE 120
FPM QGV P RVRLLL + CF+ RDGER+RKSVRGCIV+ D++ L L+IVKKG+
Sbjct: 61 FPMMQGVGAPTRVRLLLDGRSGCFKPS--RDGERKRKSVRGCIVAEDIASLQLIIVKKGD 118
Query: 121 HDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKKVSKAPKI 180
++PGLTD P +GPKRAS IRKLF LSK++DVR +V R T K SKAPKI
Sbjct: 119 AEIPGLTDVSFPASKGPKRASNIRKLFKLSKDEDVRSFV-IRRELPATDKRKAKSKAPKI 177
Query: 181 QRLVTPLTLQRKRARIAEKKQRIAKAKAEAAEYQKLLATRLKEQRER 227
QRLVTP T+ R++A A+K R KA EAAEY KL+A R + + +R
Sbjct: 178 QRLVTPTTVARRKALRAKKAARHTKASNEAAEYAKLVAQRQQAKAKR 224
>sp|Q9NE83|RS6_LEIMA 40S ribosomal protein S6 OS=Leishmania major GN=RPS6 PE=3 SV=1
Length = 249
Score = 183 bits (464), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 117/254 (46%), Positives = 155/254 (61%), Gaps = 14/254 (5%)
Query: 1 MKFNIANPTTGCQKKLEIDDDQKLRAFF-DKRISQEVNGDALGEEFKGYVFKIMGGCDKQ 59
MK NIA P G K+ EI D+ R D R+ EV+G G EFKGY+F++ GG DK
Sbjct: 1 MKLNIAYPRNGTVKQFEISDEVLRRVQLQDYRLGNEVDGAIFGSEFKGYIFRLRGGSDKD 60
Query: 60 GFPMKQGVLTPGRVRLLLHRGT---PCFRGYGRRDGERRRKSVRGCIVSPDLSVLNLVIV 116
GFPM GVL RV LL+ RG FRGY GERRRK+VRGC+++ D++++N+ I
Sbjct: 61 GFPMVPGVLASSRVSLLVKRGAIGFNTFRGY---QGERRRKNVRGCVLASDIALVNVTIS 117
Query: 117 KKGEHDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKKVS- 175
K G+ + G+TDT PR GPKRASKIRKLFNLS+ +DVRKYV KSGKK
Sbjct: 118 KVGDQPIEGVTDTTAPRRLGPKRASKIRKLFNLSRTEDVRKYVVR---RRVVKSGKKDRL 174
Query: 176 KAPKIQRLVTPLTLQRKRARIAEKKQRIAKAKAEAAEYQKLLATRLKEQRERRSESLAKK 235
KAPKIQRL+TP R+ + + ++ + AE EY +L+A+ + R+R +KK
Sbjct: 175 KAPKIQRLITPRVKARRAKKAKDAIAKVRASAAERREYLRLIASNRRALRQR---DHSKK 231
Query: 236 RSRLSAASKPSIAA 249
+R A + +AA
Sbjct: 232 HTRKVHAQRAEVAA 245
>sp|O44012|RS6_LEIIN 40S ribosomal protein S6 OS=Leishmania infantum GN=RPS6 PE=2 SV=1
Length = 249
Score = 179 bits (454), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 115/254 (45%), Positives = 154/254 (60%), Gaps = 14/254 (5%)
Query: 1 MKFNIANPTTGCQKKLEIDDDQKLRAFF-DKRISQEVNGDALGEEFKGYVFKIMGGCDKQ 59
M NIA P G K+ EI D+ R D R+ EV+G G EFKGY+F++ GG DK
Sbjct: 1 MYLNIAYPRNGTVKQFEISDEVLRRVQLQDYRLGNEVDGAIFGSEFKGYIFRLRGGSDKD 60
Query: 60 GFPMKQGVLTPGRVRLLLHRGT---PCFRGYGRRDGERRRKSVRGCIVSPDLSVLNLVIV 116
GFPM GVL RV LL+ RG FRGY GERRRK+VRGC+++ D++++N+ I
Sbjct: 61 GFPMVPGVLASSRVSLLVKRGAIGFNTFRGY---QGERRRKNVRGCVLASDIALVNVTIS 117
Query: 117 KKGEHDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKKVS- 175
K G+ + G+TDT PR GPKRASKIRKLFNLS+ +DVRKYV KSGKK
Sbjct: 118 KVGDQPIEGVTDTTAPRRLGPKRASKIRKLFNLSRTEDVRKYVVR---RRVVKSGKKDRL 174
Query: 176 KAPKIQRLVTPLTLQRKRARIAEKKQRIAKAKAEAAEYQKLLATRLKEQRERRSESLAKK 235
KAPKIQRL+TP R+ + + ++ + AE EY +L+A+ + R+R +KK
Sbjct: 175 KAPKIQRLITPRVKARRAKKAKDAIAKVRASAAERREYLRLIASNRRALRQR---DHSKK 231
Query: 236 RSRLSAASKPSIAA 249
++ A + +AA
Sbjct: 232 HTQKVHAQRAEVAA 245
>sp|Q8SRY0|RS6_ENCCU 40S ribosomal protein S6 OS=Encephalitozoon cuniculi (strain GB-M1)
GN=RPS6 PE=3 SV=1
Length = 203
Score = 100 bits (249), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/192 (38%), Positives = 104/192 (54%), Gaps = 18/192 (9%)
Query: 27 FFDKRISQEVNGDALGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRG 86
+DK+I + +G LGEEF+G + +I GG D QGFPM G LT RVR LL +G +R
Sbjct: 12 LYDKKIGDQFDGGILGEEFEGTIMEITGGDDYQGFPMVSGHLTKKRVRPLLSKGDAGYRC 71
Query: 87 YGRRDGERRRKSVRGCIVSPDLSVLNLVIVKKGEHDLPGLTDTEKPRMRGPKRASKIRKL 146
RR G RRRKSVRG IVS ++ VLNL+I++ GE ++ GLT+ P++ K+RK+
Sbjct: 72 --RRKGVRRRKSVRGSIVSEEICVLNLIILRPGEKEIDGLTNAVNDVSHLPRKEKKLRKM 129
Query: 147 FNLSKEDDVRKYVNTYRRTFTTKSGKKVSKAPKIQR-------------LVTPLTLQRKR 193
F + E+ K V Y R K PKI+ + + L+RKR
Sbjct: 130 FGVPDEE---KNVVGYIRNILKSECDDPKKIPKIRHNGKRMKREQERREQIMKIRLERKR 186
Query: 194 ARIAEKKQRIAK 205
E+K+ + K
Sbjct: 187 ILEEERKEYLEK 198
>sp|Q8TVE6|RS6E_METKA 30S ribosomal protein S6e OS=Methanopyrus kandleri (strain AV19 /
DSM 6324 / JCM 9639 / NBRC 100938) GN=rps6e PE=3 SV=1
Length = 130
Score = 79.3 bits (194), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/122 (42%), Positives = 71/122 (58%), Gaps = 10/122 (8%)
Query: 1 MKFNIANPTTGCQKKLEI--DDDQKLRAFFDKRISQEVNGDALGEEFKGYVFKIMGGCDK 58
K +A+P ++E+ +D +KL KRI ++G+ +G GY KI GG DK
Sbjct: 4 FKVVVADPEKARSYQVEVKGEDAEKL---IGKRIGDVIDGEIVG--LPGYKLKITGGTDK 58
Query: 59 QGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRDGERRRKSVRGCIVSPDLSVLNLVIVKK 118
GFPM+ + P RVRLLL G P FR R GERRRK+VRG +S D+ +N VIV+
Sbjct: 59 DGFPMRPDIHGPVRVRLLLS-GPPGFR--PERKGERRRKTVRGNTISEDIVQVNTVIVEY 115
Query: 119 GE 120
G+
Sbjct: 116 GD 117
>sp|A3CSP5|RS6E_METMJ 30S ribosomal protein S6e OS=Methanoculleus marisnigri (strain ATCC
35101 / DSM 1498 / JR1) GN=rps6e PE=3 SV=1
Length = 132
Score = 75.5 bits (184), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 64/123 (52%), Gaps = 6/123 (4%)
Query: 1 MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVNGDALGEEFKGYVFKIMGGCDKQG 60
K +++P TG K++ F KRI E++GD LG F GY KI G DK G
Sbjct: 4 FKIILSDPETGRSYKIDATG-PAAGGFVGKRIGDEIDGDVLG--FAGYTIKITGATDKTG 60
Query: 61 FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRDGERRRKSVRGCIVSPDLSVLNLVIVKKGE 120
P ++ + P R RLLL +G + DGERRRKSVRG +S D+ +N + + G
Sbjct: 61 IPSRRDLPGPSRRRLLLSKGVGF---HPVMDGERRRKSVRGNEISADIVQINAAVTQSGA 117
Query: 121 HDL 123
L
Sbjct: 118 KPL 120
>sp|P54067|RS6E_METJA 30S ribosomal protein S6e OS=Methanocaldococcus jannaschii (strain
ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
GN=rps6e PE=3 SV=1
Length = 131
Score = 75.5 bits (184), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 73/129 (56%), Gaps = 9/129 (6%)
Query: 2 KFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVNGDALGEEFKGYVFKIMGGCDKQGF 61
KF +A+P TG ++E D+ K+I + +G +G E GY +I GG D GF
Sbjct: 5 KFVVADPKTGRCYQIEADNT----PLVGKKIGEVFDGKIIGLE--GYKLQIRGGTDSSGF 58
Query: 62 PMKQGVLTPGRVRLLLHRGTPCFRGYGRRDGERRRKSVRGCIVSPDLSVLNLVIVKKGEH 121
PM+ + +VR+LL P F+ +R GERRRK+VRG ++PD+ +N+ +V+ GE
Sbjct: 59 PMRPDIHGSRKVRVLLS-APPGFKP--KRKGERRRKTVRGNTIAPDIVQINVKVVEYGEK 115
Query: 122 DLPGLTDTE 130
+P L E
Sbjct: 116 SIPELLGLE 124
>sp|C5A7C4|RS6E_THEGJ 30S ribosomal protein S6e OS=Thermococcus gammatolerans (strain DSM
15229 / JCM 11827 / EJ3) GN=rps6e PE=3 SV=1
Length = 125
Score = 73.9 bits (180), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 51/125 (40%), Positives = 68/125 (54%), Gaps = 13/125 (10%)
Query: 1 MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVN----GDALGEEFKGYV-----FK 51
K I+NP G +++EI D + KRI E+ G L E F + K
Sbjct: 4 FKVVISNPKNGIARQIEISGDAAEK-LIGKRIGDEIPVKELGINLSEIFGQEIPEDAKLK 62
Query: 52 IMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRDGERRRKSVRGCIVSPDLSVL 111
I GG DK GFPM+ V P RVR+LL RG P FR + GERR+K+VRG +SP++ +
Sbjct: 63 IKGGTDKDGFPMRPDVHGPRRVRILLSRG-PGFR--PKEKGERRKKTVRGNTISPEIVQI 119
Query: 112 NLVIV 116
N V+V
Sbjct: 120 NAVLV 124
>sp|O26360|RS6E_METTH 30S ribosomal protein S6e OS=Methanothermobacter thermautotrophicus
(strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330
/ Delta H) GN=rps6e PE=3 SV=1
Length = 126
Score = 73.9 bits (180), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 65/124 (52%), Gaps = 8/124 (6%)
Query: 1 MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVNGDALGEEFKGYVFKIMGGCDKQG 60
M F + ++E+D + R I E +G +G GY KI GG DK G
Sbjct: 1 MAFKVVISDKEKSVQMEVDPSES-RGLIGLTIGDEFDGSIIG--LSGYKLKITGGSDKNG 57
Query: 61 FPMKQGVLTPGRVRLLLHRGTPCFRGY-GRRDGERRRKSVRGCIVSPDLSVLNLVIVKKG 119
FPMK+ V R+R L+ G GY RRDGERRRK+ RG +S D+ +N V+++KG
Sbjct: 58 FPMKKTVPGARRIRSLVSGGV----GYKPRRDGERRRKTFRGNTISDDIVQINTVVIEKG 113
Query: 120 EHDL 123
E L
Sbjct: 114 EKPL 117
>sp|B6YW70|RS6E_THEON 30S ribosomal protein S6e OS=Thermococcus onnurineus (strain NA1)
GN=rps6e PE=3 SV=1
Length = 125
Score = 73.6 bits (179), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/125 (37%), Positives = 70/125 (56%), Gaps = 13/125 (10%)
Query: 1 MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVNGDALG--------EEFKGYV-FK 51
K I+NP G +++EI ++ + KRI +E++ LG EE K
Sbjct: 4 FKLVISNPKNGIARQVEISGEEAEK-LIGKRIGEEISAKELGLNLTEIFGEEIPADTKLK 62
Query: 52 IMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRDGERRRKSVRGCIVSPDLSVL 111
I GG DK GFPM+ V P RV++L+ RG P FR + GERR+K+VRG +SP++ +
Sbjct: 63 ITGGTDKDGFPMRPDVHGPRRVKILVSRG-PGFR--PKEKGERRKKTVRGNTISPEIVQI 119
Query: 112 NLVIV 116
N+ +V
Sbjct: 120 NMKLV 124
>sp|Q5JDK8|RS6E_PYRKO 30S ribosomal protein S6e OS=Pyrococcus kodakaraensis (strain ATCC
BAA-918 / JCM 12380 / KOD1) GN=rps6e PE=3 SV=1
Length = 125
Score = 72.4 bits (176), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/125 (39%), Positives = 67/125 (53%), Gaps = 13/125 (10%)
Query: 1 MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVNGDALG--------EEFKGYV-FK 51
K I+NP G K++EI + + +RI +E+ LG EE K
Sbjct: 4 FKLVISNPKNGVAKQVEISGPEADK-LIGRRIGEEIPASELGLNLSEIFGEEIPADAKLK 62
Query: 52 IMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRDGERRRKSVRGCIVSPDLSVL 111
I GG DK GFPM+ V P RV++LL RG P FR R GERR+K+V G +SP++ +
Sbjct: 63 ITGGTDKDGFPMRPDVHGPRRVKILLSRG-PGFR--PRERGERRKKTVHGNTISPNIVQV 119
Query: 112 NLVIV 116
N+ IV
Sbjct: 120 NMKIV 124
>sp|C6A2D7|RS6E_THESM 30S ribosomal protein S6e OS=Thermococcus sibiricus (strain MM 739
/ DSM 12597) GN=rps6e PE=3 SV=1
Length = 126
Score = 69.7 bits (169), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/125 (39%), Positives = 68/125 (54%), Gaps = 13/125 (10%)
Query: 1 MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVNGDALG--------EEFKGYV-FK 51
K I++ TG K++EI + + RI E+ LG E G V K
Sbjct: 4 FKLVISDTKTGVAKQIEITGAEADK-LIGLRIGDEIEAKELGFNLSEIFGSEIPGDVKLK 62
Query: 52 IMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRDGERRRKSVRGCIVSPDLSVL 111
I GG DK GFPM+ V P RV++L+ RG P FR R GERR+K+VRG +SP+++ +
Sbjct: 63 ITGGTDKDGFPMRPDVHGPRRVKILISRG-PGFRPQER--GERRKKTVRGNTISPEIAQI 119
Query: 112 NLVIV 116
N+ IV
Sbjct: 120 NVKIV 124
>sp|Q9UYS3|RS6E_PYRAB 30S ribosomal protein S6e OS=Pyrococcus abyssi (strain GE5 / Orsay)
GN=rps6e PE=3 SV=1
Length = 125
Score = 68.2 bits (165), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 69/125 (55%), Gaps = 13/125 (10%)
Query: 1 MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVN--------GDALGEEFKGYV-FK 51
K I++P TG K++EI + KRI ++ + G+EF V +
Sbjct: 4 FKLVISDPKTGIAKQIEITGPEA-EKLIGKRIGDQIPVKELGINLNELFGKEFPEDVKME 62
Query: 52 IMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRDGERRRKSVRGCIVSPDLSVL 111
I GG DK GFPM+ + P RVR+LL +G P FR + GERR+K+VRG +SP++ +
Sbjct: 63 IRGGTDKDGFPMRPDIHGPRRVRILLSKG-PGFR--PKEKGERRKKTVRGNTISPEIVQV 119
Query: 112 NLVIV 116
N+ +V
Sbjct: 120 NVKLV 124
>sp|Q8U3H8|RS6E_PYRFU 30S ribosomal protein S6e OS=Pyrococcus furiosus (strain ATCC 43587
/ DSM 3638 / JCM 8422 / Vc1) GN=rps6e PE=1 SV=1
Length = 125
Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 75/124 (60%), Gaps = 11/124 (8%)
Query: 1 MKFNIANPTTGCQKKLEID--DDQKL--RAFFDKRISQEVN---GDALGEEFKGYV-FKI 52
K I++P +G K++EI + +KL + D+ ++E+N + G+EF V +I
Sbjct: 4 FKLVISDPKSGIAKQVEITGAETEKLIGKRIGDQIPAKELNINLNELFGKEFPEDVKLEI 63
Query: 53 MGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRDGERRRKSVRGCIVSPDLSVLN 112
GG DK GFPM+ + P RVR+LL +G P FR + GERR+K+VRG +SP++ +N
Sbjct: 64 RGGTDKDGFPMRPDIHGPRRVRVLLSKG-PGFR--PKEKGERRKKTVRGNTISPEIVQVN 120
Query: 113 LVIV 116
+ +V
Sbjct: 121 VKLV 124
>sp|Q2FU50|RS6E_METHJ 30S ribosomal protein S6e OS=Methanospirillum hungatei (strain JF-1
/ DSM 864) GN=rps6e PE=3 SV=1
Length = 135
Score = 66.6 bits (161), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 65/124 (52%), Gaps = 8/124 (6%)
Query: 1 MKFNIANPTTGCQKKLEID-DDQKLRAFFDKRISQEVNGDALGEEFKGYVFKIMGGCDKQ 59
K +++P TG K ID +F KRI +E++G ALG F GY +I G D+
Sbjct: 4 FKVVLSDPATG--KAYNIDASGAGAGSFIGKRIGEEIDGAALG--FDGYKIRITGASDRN 59
Query: 60 GFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRDGERRRKSVRGCIVSPDLSVLNLVIVKKG 119
G P ++ + GR ++L+ G + R DGERRRK VRG ++ D +N ++ +G
Sbjct: 60 GTPARKTLQIAGRRKVLMAGGVGF---HPRVDGERRRKMVRGAEITQDFVQINAIVATQG 116
Query: 120 EHDL 123
L
Sbjct: 117 SKTL 120
>sp|Q466D6|RS6E_METBF 30S ribosomal protein S6e OS=Methanosarcina barkeri (strain Fusaro
/ DSM 804) GN=rps6e PE=3 SV=1
Length = 139
Score = 65.9 bits (159), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 65/127 (51%), Gaps = 8/127 (6%)
Query: 1 MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVNGDALGEEFKGYVFKIMGGCDKQG 60
K +++P G ++++ D + A K I V+G G GY KI GGCD G
Sbjct: 4 FKVVVSDPKEGRAYQIDVKDAEA-NALIGKSIGDVVDGAVFG--LSGYKVKITGGCDGSG 60
Query: 61 FPMKQGVLTPGRVRLLLHRGTPCFRGYG-RRDGERRRKSVRGCIVSPDLSVLNLVIVKKG 119
F MK +L P R R+L+ G GY + G+RRRK VRG V+PD+ +N +V+ G
Sbjct: 61 FVMKPDLLGPRRQRILMAVGV----GYTPKHPGQRRRKMVRGKEVAPDIVQINAKVVEYG 116
Query: 120 EHDLPGL 126
+ L
Sbjct: 117 SKSIKAL 123
>sp|O58349|RS6E_PYRHO 30S ribosomal protein S6e OS=Pyrococcus horikoshii (strain ATCC
700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
GN=rps6e PE=3 SV=1
Length = 125
Score = 65.5 bits (158), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 66/125 (52%), Gaps = 13/125 (10%)
Query: 1 MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVNGDALGEEFKGYVFK--------- 51
K I++P +G K++EI K+I ++ LG + K K
Sbjct: 4 FKLVISDPKSGIAKQIEISG-ANAEKLIGKKIGDQIPVKELGLDLKALFGKDFPEDVKME 62
Query: 52 IMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRDGERRRKSVRGCIVSPDLSVL 111
I GG DK GFPM+ + P RVR+LL +G P FR + GERR+K+VRG +SP++ +
Sbjct: 63 IRGGTDKDGFPMRPDIHGPRRVRILLSKG-PGFR--PKEKGERRKKTVRGNTISPEIVQV 119
Query: 112 NLVIV 116
N+ +V
Sbjct: 120 NVKLV 124
>sp|Q2NGM7|RS6E_METST 30S ribosomal protein S6e OS=Methanosphaera stadtmanae (strain DSM
3091) GN=rps6e PE=3 SV=1
Length = 130
Score = 65.5 bits (158), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 64/116 (55%), Gaps = 16/116 (13%)
Query: 19 DDDQKLRAFFDKRISQEVNGDALGEEF-------KGYVFKIMGGCDKQGFPMKQGVLTPG 71
D+D + + + ++ VNG +GEEF KGY +I GG DK GFPMK+ V
Sbjct: 9 DEDVTYQLELEDKDAKTVNGLKIGEEFNGGVLGLKGYKLRITGGSDKNGFPMKEDVDGTR 68
Query: 72 RVRLLLHRGT---PCFRGYGRRDGERRRKSVRGCIVSPDLSVLNLVIVKKGEHDLP 124
R + L++ GT P +G RRRK+VRG ++ D+S +N+ + ++GE L
Sbjct: 69 RFKSLVNGGTGFKPTKKGL------RRRKTVRGNTIADDISQINVKVSERGEQTLA 118
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.135 0.379
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 87,275,293
Number of Sequences: 539616
Number of extensions: 3610108
Number of successful extensions: 14068
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 119
Number of HSP's successfully gapped in prelim test: 178
Number of HSP's that attempted gapping in prelim test: 13496
Number of HSP's gapped (non-prelim): 541
length of query: 249
length of database: 191,569,459
effective HSP length: 115
effective length of query: 134
effective length of database: 129,513,619
effective search space: 17354824946
effective search space used: 17354824946
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)